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PHUNKEEPairing subgrapHs Using NetworK Environment Equivalence |
COG one letter code descriptions |
INFORMATION STORAGE AND PROCESSING[J] Translation, ribosomal structure and biogenesis[A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics CELLULAR PROCESSES AND SIGNALING[D] Cell cycle control, cell division, chromosome partitioning[Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport [O] Posttranslational modification, protein turnover, chaperones METABOLISM[C] Energy production and conversion[G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism POORLY CHARACTERIZED[R] General function prediction only[S] Function unknown |
| Contact Structural Bioinformatics Group Division of Molecular Biosciences Imperial College, London |
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