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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2023 Jun 24

Fold library idPDB HeaderMoleculeTitle
c8fzbC_ 3.35 transferase Chain: C: protein-lysine n-methyltransferase eef2kmt;
c8cllG_ 3.40 transcription Chain: G: general transcription factor 3c polypeptide 4;
c8de5A_ 2.02 oxidoreductase Chain: A: glyceraldehyde-3-phosphate dehydrogenase;
c8sqzF_ 5.85 immune system Chain: F: autophagy-related protein 13;
c8cllH_ 3.40 transcription Chain: H: general transcription factor 3c polypeptide 2;
c8sqzB_ 5.85 immune system Chain: B: rb1-inducible coiled-coil protein 1;
c8ouyD_ 3.40 dna binding protein Chain: D: dna repair protein xrcc2;
c8fcnI_ 2.95 chaperone, hydrolase Chain: I: ubx domain-containing protein 6;
c8dkcA_ 3.50 transcription Chain: A: dna-directed rna polymerase subunit alpha;
c8ailK_ 2.45 protein binding Chain: K: bacillus phage vmy22 p56;
c8fxsA_ 3.15 cytokine Chain: A: transforming growth factor beta-2 proprotein;
c8janC_ UNK Blank PDB header PDB COMPND:
c8g3aE_ 3.40 membrane protein Chain: E: sensor protein bces;
c8srqW_ 6.20 immune system Chain: W: phosphoinositide 3-kinase regulatory subunit 4;
c8hp7C_ 1.43 hydrolase Chain: C: (s)-2-haloacid dehalogenase;
c8srmC_ 4.46 immune system Chain: C: serine/threonine-protein kinase ulk1;
c8sorD_ 3.96 immune system Chain: D: beclin-1;
c8ainB_ 2.70 protein binding Chain: B: mcugi;
c8jatA_ 3.20 oxidoreductase Chain: A: 3-ketodihydrosphingosine reductase tsc10;
c8jj7A_ 1.77 biosynthetic protein Chain: A: lipase;
c8jajl_ 3.90 viral protein Chain: L:
c8ffzA_ 3.80 transcription/dna Chain: A: transcription factor iiia;
c8ascJ_ 2.95 dna binding protein Chain: J: protein paxx;
c8of7B_ 1.66 ligase Chain: B: rhs family protein;
c8srqY_ 6.20 immune system Chain: Y: beclin 1-associated autophagy-related key regulator;
c8itgA_ 2.25 isomerase Chain: A: poly-gamma-glutamate synthesis protein (capsule
c8fcnK_ 2.95 chaperone, hydrolase Chain: K: ubx domain-containing protein 6;
c8e4tA_ 1.95 transferase Chain: A: rtkc8 kinase domain;
c7qrlC_ 2.25 cell cycle Chain: C: dipm;
c8gbjD_ 3.11 recombination Chain: D: dna repair protein rad51 homolog 4;
c8clkD_ UNK Blank PDB header PDB COMPND:
c8e1dB_ UNK transcription/transferase Chain: B: microphthalmia-associated transcription factor;
c8ffzB_ 3.80 transcription/dna Chain: B: transcription factor tau 138 kda subunit;
c8srmE_ 4.46 immune system Chain: E: autophagy-related protein 13;
c8aimG_ 2.60 protein binding Chain: G: uracil-dna glycosylase inhibitor;
c7u5dA_ 3.52 dna binding protein/dna/rna Chain: A: cas8/5;
c8ofoA_ UNK Blank PDB header PDB COMPND:
c8p6jA_ UNK Blank PDB header PDB COMPND:
c8cliA_ 3.20 transcription Chain: A: general transcription factor 3c polypeptide 1;
c8hk9A_ 2.00 transport protein Chain: A: periplasmic terephthalate binding protein (tbp);
c8fcyA_ 3.40 motor protein Chain: A: cytoplasmic dynein 1 heavy chain 1;
c8ovhD_ 2.17 lyase Chain: D: homocysteine/cysteine synthase;
c8fcpG_ 3.52 chaperone, hydrolase Chain: G: ubx domain-containing protein 6;
c8j1aR_ 3.24 immune system Chain: R: g-protein coupled receptor 84;
c8dkcD_ 3.50 transcription Chain: D: dna-directed rna polymerase subunit beta';
c8fcnL_ 2.95 chaperone, hydrolase Chain: L: ubx domain-containing protein 6;
c8ailA_ 2.45 protein binding Chain: A: uracil-dna glycosylase;
c8ebbA_ 1.88 unknown function Chain: A: secreted in xylem six6;
c7y68A_ 2.87 membrane protein Chain: A: sid1 transmembrane family member 2;
c8daeA_ 2.00 transferase, oxidoreductase Chain: A: bifunctional dihydrofolate reductase-thymidylate synthase
c8chxB_ 1.80 lipid transport Chain: B: outer-membrane lipoprotein carrier protein;
c8fazC_ 2.30 recombination Chain: C: dna repair protein rad51 homolog 3;
c8gulA_ 2.44 metal binding protein Chain: A: glcnac-binding protein a;
c8cgmB_ 1.70 protein transport Chain: B: outer membrane lipoprotein carrier protein lola;
c8ofhC_ 1.64 transferase Chain: C: diadenylate cyclase;
c8fctG_ 3.42 chaperone, hydrolase Chain: G: ubx domain-containing protein 6;
c8hyjA_ 4.30 transcription Chain: A: dna-directed rna polymerase v subunit 1;
c7ytfA_ 2.65 photosynthesis Chain: A: ketosteroid isomerase-related protein;
c8hyjW_ 4.30 transcription Chain: W: protein rna-directed dna methylation 3;
c7qacA_ UNK hormone Chain: A: insulin a chain;
c8hyjG_ 4.30 transcription Chain: G: dna-directed rna polymerase v subunit 7;
c8afzC_ 10.00 transport protein Chain: C: cation-independent mannose-6-phosphate receptor;
c8fazB_ 2.30 recombination Chain: B: dna repair protein rad51 homolog 2;
c8owiB_ 2.14 cell cycle Chain: B: centromere-associated protein e;
c8fcnG_ 2.95 chaperone, hydrolase Chain: G: ubx domain-containing protein 6;
c8guuA_ 2.01 hydrolase Chain: A: sortase-like protein, putative;
c8hf2B_ 4.14 membrane protein Chain: B: pra1 family protein;
c8fcnH_ 2.95 chaperone, hydrolase Chain: H: ubx domain-containing protein 6;
c7ythC_ 1.93 photosynthesis Chain: C: ketosteroid isomerase-related protein;
c8srmA_ 4.46 immune system Chain: A: rb1-inducible coiled-coil protein 1;
c8ofjB_ 2.25 transferase Chain: B: diadenylate cyclase;
c8oijA_ 2.00 rna binding protein Chain: A: protein smaug;
c8p0sB_ 2.20 signaling protein Chain: B: rho-associated protein kinase 1;
c8scxA_ 2.70 translocase Chain: A: mitochondrial import inner membrane translocase subunit
c8cm1A_ 1.46 protein transport Chain: A: outer-membrane lipoprotein lolb;
c8cllA_ 3.40 transcription Chain: A: general transcription factor 3c polypeptide 1;
c8scxC_ 2.70 translocase Chain: C: mitochondrial import inner membrane translocase subunit
c7y5sA_ 3.00 viral protein Chain: A: phage tail fiber;
c8fdtA_ 3.20 motor protein Chain: A: cytoplasmic dynein 1 heavy chain 1;
c8srqX_ 6.20 immune system Chain: X: phosphatidylinositol 3-kinase catalytic subunit type 3;
c8fcnJ_ 2.95 chaperone, hydrolase Chain: J: ubx domain-containing protein 6;
c8hyjD_ 4.30 transcription Chain: D: dna-directed rna polymerases iv and v subunit 4;
c8clkA_ UNK Blank PDB header PDB COMPND:
c8ffzC_ 3.80 transcription/dna Chain: C: transcription factor tau 131 kda subunit;
c8e2wA_ 2.95 dna binding protein Chain: A: casding;
c8iruR_ 3.20 membrane protein Chain: R: d(4) dopamine receptor;
c8bwbA_ UNK toxin Chain: A: omega-ctenitoxin-pn4a;
c7y5mA_ 1.50 viral protein Chain: A: rna-directed rna polymerase;
c8dkcE_ 3.50 transcription Chain: E: rna polymerase rpb6;
c8srmB_ 4.46 immune system Chain: B: rb1-inducible coiled-coil protein 1;
c8afzB_ 10.00 transport protein Chain: B: sorting nexin-5;
c8eb9A_ 1.28 unknown function Chain: A: secreted in xylem six8;
c8ffzD_ 3.80 transcription/dna Chain: D: transcription factor tau 95 kda subunit;
c8dkcC_ 3.50 transcription Chain: C: dna-directed rna polymerase subunit beta;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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