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 Protein Homology/analogY Recognition Engine V 2.0


New fold library entries added 2015 Feb 21

Fold library idPDB HeaderMoleculeTitle
c4tt1A_ hydrolase Chain: A: deneddylase; crystal structure of fragment 1600-1733 of hsv1 ul36, native
c4rheB_ lyase Chain: B: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; crystal structure of ubix, an aromatic acid decarboxylase from the2 colwellia psychrerythraea 34h
c4ot7A_ oxidoreductase Chain: A: nadh:flavin oxidoreductase/nadh oxidase; x-structure of a variant of ncr from zymomonas mobilis
c4v2t2_ transport protein Chain: 2: pleurotolysin a; membrane embedded pleurotolysin pore with 13 fold symmetry
c4q25B_ unknown function Chain: B: phosphate-specific transport system accessory protein phou crystal structure of phou from pseudomonas aeruginosa
c4v3aC_ transport protein Chain: C: pleurotolysin b; membrane bound pleurotolysin prepore (tmh1 lock) trapped2 with engineered disulphide cross-link
c4oqrA_ oxidoreductase/oxidoreductase inhibitor Chain: A: cyp105as1; structure of a cyp105as1 mutant in complex with compactin
c4pneA_ biosynthetic protein Chain: A: methyltransferase-like protein; crystal structure of the [4+2]-cyclase spnf
c4cp1A_ cell adhesion Chain: A: epithelial adhesin 9; crystal structure of epithelial adhesin 9 a domain (epa9a)2 from candida glabrata in complex with galb1-3glcnac
c4d6kE_ transcription Chain: E: deoxynucleotidyltransferase terminal-interacting protein structure of dnttip1 dimerisation domain.
c4xxtA_ hydrolase Chain: A: fusion of predicted zn-dependent amidase/peptidase (cell crystal structure of fused zn-dependent2 amidase/peptidase/peptodoglycan-binding domain-containing protein3 from clostridium acetobutylicum atcc 824
c4v2kA_ oxidoreductase Chain: A: thiosulfate dehydrogenase; crystal structure of the thiosulfate dehydrogenase tsda in2 complex with thiosulfate
c4cnlA_ choline-binding protein Chain: A: putative pneumococcal surface protein; crystal structure of the choline-binding domain of cbpl2 from streptococcus pneumoniae
c4xp8A_ hydrolase Chain: A: etga protein; structure of etga d60n mutant
c4ww4A_ hydrolase Chain: A: ruvb-like 1; double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
c4x28D_ oxidoreductase Chain: D: acyl-coa dehydrogenase; crystal structure of the chse4-chse5 complex from mycobacterium2 tuberculosis
c4xy3A_ protein transport Chain: A: esx-1 secretion-associated protein espb; structure of esx-1 secreted protein espb
c4xgjA_ structural genomics, unknown function Chain: A: uncharacterized protein; crystal structure of a domain of unknown function (duf1537) from2 pectobacterium atrosepticum (eca3761), target efi-511609, apo3 structure, domain swapped dimer
c2mwiA_ protein binding Chain: A: deoxynucleotidyltransferase terminal-interacting protein 1; the structure of the carboxy-terminal domain of dnttip1
c4qysA_ lyase Chain: A: tryptophan synthase beta chain 2; trpb2 enzymes
c4ww4B_ hydrolase Chain: B: ruvb-like 2; double-heterohexameric rings of full-length rvb1(adp)/rvb2(adp)
c3j9bA_ rna binding protein/transferase/rna Chain: A: polymerase; electron cryo-microscopy of an rna polymerase
c2mlwA_ toxin Chain: A: type-1ba cytolytic delta-endotoxin; new cyt-like delta-endotoxins from dickeya dadantii - cytc protein
c4uutA_ transcription Chain: A: homeotic protein ultrabithorax; crystal structure of the ultrabithorax protein
c4x7pB_ transferase Chain: B: tarm; crystal structure of apo s. aureus tarm
c4x28B_ oxidoreductase Chain: B: acyl-coa dehydrogenase; crystal structure of the chse4-chse5 complex from mycobacterium2 tuberculosis
c4oy4A_ calcium binding, fluorescent, transferas Chain: A: chimera protein of calmodulin, gpf-like protein eosfp, and calcium-free campari v0.2
c4r1jA_ rna binding protein Chain: A: gu4 nucleic-binding protein 1; crystal structure of arc1p-c
c4wfqA_ transcription Chain: A: suppressor of stem-loop protein 1; crystal structure of tfiih subunit
c2mxrA_ signaling protein Chain: A: protein phosphatase 1 regulatory subunit 12a; solution structure of coiled coil domain of myosin binding subunit of2 myosin light chain phosphatase
c2mt4A_ transcription Chain: A: transcription termination/antitermination protein nusa; solution structure of the n-terminal domain of nusa from b. subtilis
c4wqsD_ transferase/dna/rna Chain: D: dna-directed rna polymerase subunit beta'; thermus thermophilus rna polymerase backtracked complex
c5afrB_ motor protein Chain: B: dynein heavy chain, cytoplasmic; n-terminal fragment of dynein heavy chain
c3j9bH_ rna binding protein/transferase/rna Chain: H: polymerase; electron cryo-microscopy of an rna polymerase

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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