Standard Mode | Switch to Expert Mode | Login to view past jobs Retrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Apr 12

Fold library idPDB HeaderMoleculeTitle
c1vw4T_ ribosome Chain: T: 54s ribosomal protein l4, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c3wmmY_ photosynthesis Chain: Y: lh1 alpha polypeptide; crystal structure of the lh1-rc complex from thermochromatium tepidum2 in c2 form
c4is4G_ ligase Chain: G: glutamine synthetase; the glutamine synthetase from the dicotyledonous plant m. truncatula2 is a decamer
c1vw4Z_ ribosome Chain: Z: mitochondrial ribosomal protein ynl122c; structure of the yeast mitochondrial large ribosomal subunit
c4pogC_ replication, dna binding protein/dna Chain: C: cell division control protein 21; mcm-ssdna co-crystal structure
c1vw47_ ribosome Chain: 7: 54s ribosomal protein img2, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw46_ ribosome Chain: 6: 54s ribosomal protein l17, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c3wmmP_ photosynthesis Chain: P: lh1 beta polypeptide; crystal structure of the lh1-rc complex from thermochromatium tepidum2 in c2 form
c1vw4E_ ribosome Chain: E: 54s ribosomal protein l7, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4O_ ribosome Chain: O: 54s ribosomal protein l22, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4o9gA_ isomerase Chain: A: qdta; crystal structure of the h51n mutant of the 3,4-ketoisomerase qdta2 from thermoanaerobacterium thermosaccharolyticum in complex with tdp-3 4-keto-6-deoxyglucose
c1vw45_ ribosome Chain: 5: 54s ribosomal protein l3, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4onsB_ cell adhesion Chain: B: catenin beta-1; structural and thermodynamic characterization of cadherin-beta-2 catenin-alpha-catenin complex formation
c4om3D_ transcription, dna binding Chain: D: transducin-like enhancer protein 1; crystal structure of human tle1 q-domain residues 20-156
c1vw49_ ribosome Chain: 9: 54s ribosomal protein l15, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4on1B_ hydrolase Chain: B: putative metalloprotease ii; crystal structure of metalloproteinase-ii from bacteroides fragilis
c1vw4G_ ribosome Chain: G: 54s ribosomal protein l50, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4pxoA_ transferase Chain: A: maleylacetoacetate isomerase (glutathione s-transferase); crystal structure of maleylacetoacetate isomerase from methylobacteriu2 extorquens am1 with bound malonate and gsh (target efi-507068)
c4chmB_ cell cycle Chain: B: imc sub-compartment protein isp1; structure of inner membrane complex (imc) sub-compartment2 protein 1 (isp1) from toxoplasma gondii
c4chjA_ cell cycle Chain: A: imc sub-compartment protein isp3; structure of inner membrane complex (imc) sub-compartment2 protein 3 (isp3) from toxoplasma gondii
c2m6rA_ electron transport Chain: A: flavodoxin; apo_yqca
c4h05B_ transferase Chain: B: aminoglycoside-o-phosphotransferase viii; crystal structure of aminoglycoside-3'-phosphotransferase of type viii
c1vw4V_ ribosome Chain: V: 54s ribosomal protein l36, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4S_ ribosome Chain: S: 54s ribosomal protein l24, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw3B_ ribosome Chain: B: 54s ribosomal protein rml2, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4Y_ ribosome Chain: Y: 54s ribosomal protein l34, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4bg5B_ membrane protein Chain: B: bba65; lyme disease associated outer surface protein bba65 from2 borrelia burgdorferi
c4hndB_ transferase Chain: B: phosphatidylinositol 4-kinase type 2-alpha; crystal stucture of the catalytic domain of selenomethionine2 substituted human pi4kiialpha in complex with adp
c2m6jA_ toxin Chain: A: toxin abtx; structure of a vertebrate toxin from the badge huntsman spider
c4bg0A_ cell adhesion Chain: A: complement regulator-acquiring surface protein 2 (crasp-2 crystal structure of complement factors h and fhl-1 binding2 protein bbh06 or crasp-2 from borrelia burgdorferi
c4nooA_ immune system Chain: A: vgrg protein; molecular mechanism for self-protection against type vi secretion2 system in vibrio cholerae
c4ctiA_ signaling protein Chain: A: osmolarity sensor protein envz, af1503; escherichia coli envz histidine kinase catalytic part fused2 to archaeoglobus fulgidus af1503 hamp domain
c1vw4J_ ribosome Chain: J: 54s ribosomal protein l10, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw3C_ ribosome Chain: C: 54s ribosomal protein l9, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4cjmA_ signaling protein Chain: A: fibroblast growth factor 18; crystal structure of human fgf18
c1vw43_ ribosome Chain: 3: 54s ribosomal protein l27, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4kv3A_ protein transport Chain: A: chimera fusion protein of esx-1 secretion system protein ubiquitin-like domain of the mycobacterium tuberculosis type vii2 secretion system protein eccd1 as maltose-binding protein fusion
c2lzpA_ viral protein Chain: A: ns2 peptide; structure of ns2(2-32) gbvb protein
c4onsC_ cell adhesion Chain: C: catenin alpha-2; structural and thermodynamic characterization of cadherin-beta-2 catenin-alpha-catenin complex formation
c4ok0B_ transferase Chain: B: putative; crystal structure of putative nucleotidyltransferase from h. pylori
c4ptsB_ transferase Chain: B: glutathione s-transferase; crystal structure of a glutathione transferase from gordonia2 bronchialis dsm 43247, target efi-507405
c1vw4I_ ribosome Chain: I: 54s ribosomal protein l38, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4H_ ribosome Chain: H: 54s ribosomal protein l23, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw40_ ribosome Chain: 0: 54s ribosomal protein rtc6, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw44_ ribosome Chain: 4: 54s ribosomal protein l51, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw3D_ ribosome Chain: D: 54s ribosomal protein yml6, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4lxrA_ immune system/cytokine Chain: A: protein toll; structure of the toll - spatzle complex, a molecular hub in drosophila2 development and innate immunity
c4jzjD_ cytokine receptor/immune system Chain: D: interleukin-3 receptor subunit alpha; crystal structure of receptor-fab complex
c1vw4U_ ribosome Chain: U: 54s ribosomal protein l33, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4P_ ribosome Chain: P: 54s ribosomal protein l41, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c2mjnA_ rna binding protein Chain: A: nucleolysin tia-1 isoform p40; structure, dynamics and rna binding of the multi-domain splicing2 factor tia-1
c4ox9V_ ribosome/antibiotic Chain: V: 30s ribosomal protein thx; crystal structure of the aminoglycoside resistance methyltransferase2 npma bound to the 30s ribosomal subunit
c4nooB_ immune system Chain: B: putative uncharacterized protein; molecular mechanism for self-protection against type vi secretion2 system in vibrio cholerae
c1vw41_ ribosome Chain: 1: 54s ribosomal protein l35, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4n3uA_ oxidoreductase Chain: A: potential secreted cu/zn superoxide dismutase; candida albicans superoxide dismutase 5 (sod5), cu(ii)
c1vw4K_ ribosome Chain: K: 54s ribosomal protein l16, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4W_ ribosome Chain: W: 54s ribosomal protein l32, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4cu4B_ transport protein/antibiotic Chain: B: microcin j25; fhua from e. coli in complex with the lasso peptide microcin j252 (mccj25)
c1vw4R_ ribosome Chain: R: 54s ribosomal protein l2, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw42_ ribosome Chain: 2: 54s ribosomal protein l28, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4cvoA_ hydrolase Chain: A: dna excision repair protein ercc-6; crystal structure of the n-terminal colied-coil domain of2 human dna excision repair protein ercc-6
c4nuzA_ hydrolase Chain: A: endo-beta-n-acetylglucosaminidase f2; crystal structure of a glycosynthase mutant (d233q) of endos, an endo-2 beta-n-acetyl-glucosaminidase from streptococcus pyogenes
c1vw4a_ ribosome Chain: A: structure of the yeast mitochondrial large ribosomal subunit
c4ccsA_ unknown function Chain: A: cbix; the structure of cbix, the terminal enzyme for biosynthesis2 of siroheme in denitrifying bacteria
c4k12B_ immune system/choline binding protein Chain: B: choline binding protein a; structural basis for host specificity of factor h binding by2 streptococcus pneumoniae
c4p8sA_ membrane protein Chain: A: reticulon-4 receptor-like 2; crystal structure of nogo-receptor-2
c4p7cB_ transferase Chain: B: trna (mo5u34)-methyltransferase; crystal structure of putative methyltransferase from
c1vw4F_ ribosome Chain: F: 54s ribosomal protein l6, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c4cswA_ oxidoreductase Chain: A: cupin 4 family protein; rhodothermus marinus ycfd-like ribosomal protein l162 arginyl hydroxylase
c1vw4d_ ribosome Chain: D: structure of the yeast mitochondrial large ribosomal subunit
c1vw4N_ ribosome Chain: N: 54s ribosomal protein l49, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c2lzqA_ viral protein Chain: A: ns2 peptide; structure of ns2(32-57) gbvb protein
c4jz5A_ hydrolase Chain: A: gp26; high-resolution structure of catalytic domain of endolysin ply40 from2 bacteriophage p40 of listeria monocytogenes
c1vw4c_ ribosome Chain: C: structure of the yeast mitochondrial large ribosomal subunit
c1vw4b_ ribosome Chain: B: structure of the yeast mitochondrial large ribosomal subunit
c4pz0A_ sugar binding protein Chain: A: sugar abc transporter, sugar-binding protein; the crystal structure of a solute binding protein from bacillus2 anthracis str. ames in complex with quorum-sensing signal3 autoinducer-2 (ai-2)
c1vw48_ ribosome Chain: 8: 54s ribosomal protein l13, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4M_ ribosome Chain: M: 54s ribosomal protein img1, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4Q_ ribosome Chain: Q: 54s ribosomal protein l40, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4X_ ribosome Chain: X: 54s ribosomal protein l39, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit
c1vw4L_ ribosome Chain: L: 54s ribosomal protein l8, mitochondrial; structure of the yeast mitochondrial large ribosomal subunit


Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D