Phyre 2 Results for A1KXE4

Email	l.a.kelley@imperial.ac.uk
Description	A1KXE4
Date	Wed Jun 6 09:57:04 BST 2012
Unique Job ID	252cd16fa99985d8

Summary

Top model

Image coloured by rainbow N → C terminus

Model (left) based on template d2ay0a1

Top template information

Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:PutA pre-N-terminal region-like

Confidence and coverage

Confidence:

0.2%

Coverage:

3 residues ( 2% of your sequence) have been modelled with 0.2% confidence by the single highest scoring template.

You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.

Please note: You must be registered and logged in to use Phyrealarm.

Warning: 98% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.

3D viewing

Interactive 3D view in Jmol

Sequence analysis

Secondary structure and disorder prediction

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60

Sequence M N P V Y S P G S S G V P Y A N A K G I G Y P A G F P M G Y A A A A P A Y S P N M Y P G A N P T F Q T G Y T P G T P Y K

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence V S C S P T S G A V P P Y S S S P N P Y Q T A V Y P V R S A Y P Q Q S P Y A Q Q G T Y Y T Q P L Y A A P P H V I H H T T

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ? ? ? ?
?
? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180

Sequence V V Q P N G M P A T V Y P A P I P P P R G N G V T M G M V A G T T M A M S A G T L L T A H S P T P V A P H P V T V P T Y

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 190 . . . . .

Sequence R A P G T P T Y S Y V P P Q W

Secondary structure

SS confidence

Disorder ? ? ? ?
? ?
? ? ? ? ? ? ?

Disorder confidence

Confidence Key
High(9) Low (0)

? Disordered

Alpha helix

Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank	Aligned region

No hits with confidence > 5%