Phyre 2 Results for A1A4G5

Email	l.a.kelley@imperial.ac.uk
Description	A1A4G5
Date	Wed May 9 17:41:39 BST 2012
Unique Job ID	1c0305709ee8af1f

Summary

Top model

Image coloured by rainbow N → C terminus

Model (left) based on template c2d7gD_

Top template information

PDB header:hydrolase
Chain: D: PDB Molecule:primosomal protein n;
PDBTitle: crystal structure of the aa complex of the n-terminal2 domain of pria

Confidence and coverage

Confidence:

52.4%

Coverage:

12%

21 residues ( 12% of your sequence) have been modelled with 52.4% confidence by the single highest scoring template.

You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.

Please note: You must be registered and logged in to use Phyrealarm.

Warning: 57% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.

3D viewing

Interactive 3D view in Jmol

Sequence analysis

Secondary structure and disorder prediction

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60

Sequence M E H K D D D D D D V S F A K W M S S F W G H S W R E E D Q R G L R E R H R L Q A T S H R K T S L P C P L P V L P R I P

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ?
? ? ?
? ? ? ?
? ? ? ? ?

Disorder confidence

. . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence S S D C H P R R H S H E D Q E F R C R S H V R D Y R K Y S E D G S F K E P L E S K G R S H S K I E K F S E S F E R Q L C

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
?
? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
? ?

Disorder confidence

. . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . .

Sequence F R T K R S A S L G P E S R K E R N E R E C L R M E I K S R K K V E E E R S S R K E E H G E A H M A P L F E K G P E

Secondary structure

SS confidence

Disorder
? ? ? ? ? ? ? ?
?
? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
? ? ? ? ?

Disorder confidence

Confidence Key
High(9) Low (0)

? Disordered

Alpha helix

Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank	Aligned region

PDB 2d7g chain D

Region: 7 - 27
Aligned: 21
Modelled: 21
Confidence: 52.4%
Identity: 10%
PDB header:hydrolase
Chain: D: PDB Molecule:primosomal protein n;
PDBTitle: crystal structure of the aa complex of the n-terminal2 domain of pria

Phyre2

c2d7gD_