Phyre 2 Results for A6X993

Email	l.a.kelley@imperial.ac.uk
Description	A6X993
Date	Sun Jul 8 11:45:03 BST 2012
Unique Job ID	4dc7572422698a50

Summary

Top model

Image coloured by rainbow N → C terminus

Model (left) based on template d1yvua1

Top template information

Fold:SH3-like barrel
Superfamily:PAZ domain
Family:PAZ domain

Confidence and coverage

Confidence:

17.8%

Coverage:

26%

37 residues ( 26% of your sequence) have been modelled with 17.8% confidence by the single highest scoring template.

You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.

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3D viewing

Interactive 3D view in Jmol

Sequence analysis

Secondary structure and disorder prediction

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60

Sequence M V I S S V F S A F A D I P S V Y L I S V N C G A R E L W L T I T S I H F V S L R E Q R Y E F L A N S L G E R T S S L K

Secondary structure

SS confidence

Disorder ? ? ?
? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence S Q E E M V S V S R N G K Q L L S E A S F F R L G K H V H L N F L P F E N T F E M A L R N D F Q I F C T S I L F T C Y I

Secondary structure

SS confidence

Disorder ?
? ?
?
?

Disorder confidence

. . . . . . . . . 130 . . . . . . . . . 140 .

Sequence Q S F S L L I S N F F I A I E V S R S F F

Secondary structure

SS confidence

Disorder
? ? ? ? ? ?

Disorder confidence

Confidence Key
High(9) Low (0)

? Disordered

Alpha helix

Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank	Aligned region

PDB 1yvu chain A domain 1

Region: 71 - 107
Aligned: 37
Modelled: 37
Confidence: 17.8%
Identity: 38%
Fold: SH3-like barrel
Superfamily: PAZ domain
Family: PAZ domain

Phyre2

PDB 1dsx chain A

Region: 73 - 85
Aligned: 13
Modelled: 13
Confidence: 8.3%
Identity: 31%
Fold: POZ domain
Superfamily: POZ domain
Family: Tetramerization domain of potassium channels

Phyre2

PDB 1a68 chain A

Region: 73 - 85
Aligned: 13
Modelled: 13
Confidence: 5.7%
Identity: 31%
Fold: POZ domain
Superfamily: POZ domain
Family: Tetramerization domain of potassium channels

Phyre2

d1yvua1

d1dsxa_

d1a68a_

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence	M	V	I	S	S	V	F	S	A	F	A	D	I	P	S	V	Y	L	I	S	V	N	C	G	A	R	E	L	W	L	T	I	T	S	I	H	F	V	S	L	R	E	Q	R	Y	E	F	L	A	N	S	L	G	E	R	T	S	S	L	K
Secondary structure
SS confidence
Disorder	?	?	?																																																			?	?	?	?	?	?	?
Disorder confidence

	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	S	Q	E	E	M	V	S	V	S	R	N	G	K	Q	L	L	S	E	A	S	F	F	R	L	G	K	H	V	H	L	N	F	L	P	F	E	N	T	F	E	M	A	L	R	N	D	F	Q	I	F	C	T	S	I	L	F	T	C	Y	I
Secondary structure
SS confidence
Disorder	?						?	?			?					?
Disorder confidence

	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Sequence	Q	S	F	S	L	L	I	S	N	F	F	I	A	I	E	V	S	R	S	F	F
Secondary structure
SS confidence
Disorder																?	?	?	?	?	?
Disorder confidence