Phyre 2 Results for O13547

Email	l.a.kelley@imperial.ac.uk
Description	O13547
Date	Mon Jul 2 19:10:12 BST 2012
Unique Job ID	b38790c04c3003d5

Summary

Top model

Image coloured by rainbow N → C terminus

Model (left) based on template c3dvmB_

Top template information

PDB header:membrane protein
Chain: B: PDB Molecule:voltage-dependent p/q-type calcium channel subunit alpha-
PDBTitle: crystal structure of ca2+/cam-cav2.1 iq domain complex

Confidence and coverage

Confidence:

0.1%

Coverage:

5 residues ( 2% of your sequence) have been modelled with 0.1% confidence by the single highest scoring template.

You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.

Please note: You must be registered and logged in to use Phyrealarm.

Warning: 76% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.

3D viewing

Interactive 3D view in Jmol

Sequence analysis

Secondary structure and disorder prediction

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60

Sequence M R A T T L L S S V V S L A L L S K E V L A T P P A C L L A C V A Q V G K S S S T C D S L N Q V T C Y C E H E N S A V K

Secondary structure

SS confidence

Disorder ? ? ? ?
? ? ? ? ? ?
? ? ? ? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence K C L D S I C P N N D A D A A Y S A F K S S C S E Q N A S L G D S S S S A S S S A S S S S K A S S S T K A S S S S A S S

Secondary structure

SS confidence

Disorder
?
? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180

Sequence S T K A S S S S A S S S T K A S S S S A A P S S S K A S S T E S S S S S S S S T K A P S S E E S S S T Y V S S S K Q A S

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . .

Sequence S T S E A H S S S A A S S T V S Q E T V S S A L P T S T A V I S T F S E G S G N V L E A G K S V F I A A V A A M L I

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
?
? ?

Disorder confidence

Confidence Key
High(9) Low (0)

? Disordered

Alpha helix

Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank	Aligned region

No hits with confidence > 5%