Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP02340
DateTue Jul 30 12:57:01 BST 2013
Unique Job IDb848bad981392610
SequenceMEESQSDISL ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.505 Y:46.808 Z:62.631
Model (left) based on template c3q06B_
Top template information
PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity
Confidence and coverage
Confidence:100.0% Coverage: 60%
231 residues ( 60% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
315 residues ( 81%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MEESQSDISLELPLSQETFSGLWKLLPPEDILPSPHCMDDLLLPQDVEEFFEGPSEALRV
Secondary structure 
SS confidence 
Disorder  ?????????
?
??
????
????????????
?
?
???????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  SGAPAAQDPVTETPGPVAPAPATPWPLSSFVPSQKTYQGNYGFHLGFLQSGTAKSVMCTY
Secondary structure 
SS confidence 
Disorder  ?????????????????????????????????
????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  SPPLNKLFCQLAKTCPVQLWVSATPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCSDGD
Secondary structure 
SS confidence 
Disorder 
??????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  GLAPPQHLIRVEGNLYPEYLEDRQTFRHSVVVPYEPPEAGSEYTTIHYKYMCNSSCMGGM
Secondary structure 
SS confidence 
Disorder  ????
?????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  NRRPILTIITLEDSSGNLLGRDSFEVRVCACPGRDRRTEEENFRKKEVLCPELPPGSAKR
Secondary structure 
SS confidence 
Disorder  ?
?????????????????????????
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  ALPTCTSASPPQKKKPLDGEYFTLKIRGRKRFEMFRELNEALELKDAHATEESGDSRAHS
Secondary structure 
SS confidence 
Disorder  ???????????????????
????????????????
Disorder confidence 
 
   .........370.........380.......
Sequence  SYLKTKKGQSTSRHKKTMVKKVGPDSD
Secondary structure 
SS confidence 
Disorder  ???????????????????????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 46%)
Alpha helix ( 17%)
Beta strand ( 29%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3q06 chain B

3D model

Region: 90 - 348
Aligned: 231
Modelled: 231
Confidence: 100.0%
Identity: 86%
PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity

Phyre2

PDB 2rmn chain A

3D model

Region: 78 - 300
Aligned: 223
Modelled: 223
Confidence: 100.0%
Identity: 51%
PDB header:cell cycle, antitumor protein
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: the solution structure of the p63 dna-binding domain

Phyre2

PDB 2j1x chain A

3D model

Region: 90 - 284
Aligned: 195
Modelled: 195
Confidence: 100.0%
Identity: 88%
PDB header:nuclear protein
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: human p53 core domain mutant m133l-v203a-y220c-n239y-n268d

Phyre2

PDB 2ac0 chain A domain 1

3D model

Region: 90 - 282
Aligned: 193
Modelled: 193
Confidence: 100.0%
Identity: 89%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 2xip chain A

3D model

Region: 88 - 289
Aligned: 199
Modelled: 202
Confidence: 100.0%
Identity: 57%
PDB header:cell cycle
Chain: A: PDB Molecule:tumour protein p73;
PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution

Phyre2

PDB 1hu8 chain A

3D model

Region: 96 - 281
Aligned: 186
Modelled: 186
Confidence: 100.0%
Identity: 99%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 4a9z chain D

3D model

Region: 318 - 359
Aligned: 42
Modelled: 42
Confidence: 99.3%
Identity: 31%
PDB header:transcription
Chain: D: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain

Phyre2

PDB 4a9z chain C

3D model

Region: 318 - 359
Aligned: 42
Modelled: 42
Confidence: 99.3%
Identity: 31%
PDB header:transcription
Chain: C: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain

Phyre2

PDB 3zy1 chain A

3D model

Region: 319 - 358
Aligned: 40
Modelled: 40
Confidence: 99.3%
Identity: 30%
PDB header:transcription
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of the human p63 tetramerization domain

Phyre2

PDB 2wtt chain L

3D model

Region: 320 - 359
Aligned: 40
Modelled: 40
Confidence: 99.2%
Identity: 30%
PDB header:transcription
Chain: L: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)

Phyre2

PDB 3sak chain A

3D model

Region: 313 - 354
Aligned: 42
Modelled: 42
Confidence: 99.2%
Identity: 86%
Fold: p53 tetramerization domain
Superfamily: p53 tetramerization domain
Family: p53 tetramerization domain

Phyre2

PDB 2wtt chain N

3D model

Region: 322 - 359
Aligned: 38
Modelled: 38
Confidence: 99.0%
Identity: 32%
PDB header:transcription
Chain: N: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)

Phyre2

PDB 2wtt chain H

3D model

Region: 322 - 358
Aligned: 37
Modelled: 37
Confidence: 99.0%
Identity: 32%
PDB header:transcription
Chain: H: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)

Phyre2

PDB 2wqj chain K

3D model

Region: 318 - 345
Aligned: 28
Modelled: 28
Confidence: 98.6%
Identity: 43%
PDB header:transcription
Chain: K: PDB Molecule:tumor protein p73;
PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain

Phyre2

PDB 1t4w chain A

3D model

Region: 100 - 278
Aligned: 169
Modelled: 179
Confidence: 98.6%
Identity: 21%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 2k8f chain B

3D model

Region: 1 - 32
Aligned: 32
Modelled: 32
Confidence: 98.6%
Identity: 72%
PDB header:transferase/transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structural basis for the regulation of p53 function by p300

Phyre2

PDB 1hs5 chain A

3D model

Region: 318 - 351
Aligned: 34
Modelled: 34
Confidence: 98.6%
Identity: 79%
Fold: p53 tetramerization domain
Superfamily: p53 tetramerization domain
Family: p53 tetramerization domain

Phyre2

PDB 1aie chain A

3D model

Region: 320 - 350
Aligned: 31
Modelled: 31
Confidence: 98.4%
Identity: 87%
Fold: p53 tetramerization domain
Superfamily: p53 tetramerization domain
Family: p53 tetramerization domain

Phyre2

PDB 2j10 chain B

3D model

Region: 320 - 350
Aligned: 31
Modelled: 31
Confidence: 98.3%
Identity: 87%
PDB header:transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k

Phyre2

PDB 2j10 chain A

3D model

Region: 320 - 350
Aligned: 31
Modelled: 31
Confidence: 98.3%
Identity: 87%
PDB header:transcription
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k

Phyre2

PDB 2l14 chain B

3D model

Region: 13 - 51
Aligned: 39
Modelled: 39
Confidence: 97.7%
Identity: 62%
PDB header:protein binding
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of cbp nuclear coactivator binding domain in complex with2 p53 tad

Phyre2

PDB 1dt7 chain Y

3D model

Region: 361 - 383
Aligned: 23
Modelled: 22
Confidence: 91.5%
Identity: 70%
PDB header:signaling protein
Chain: Y: PDB Molecule:cellular tumor antigen p53;
PDBTitle: solution structure of the c-terminal negative regulatory2 domain of p53 in a complex with ca2+-bound s100b(bb)

Phyre2

PDB 1dt7 chain X

3D model

Region: 361 - 383
Aligned: 23
Modelled: 22
Confidence: 91.5%
Identity: 70%
PDB header:signaling protein
Chain: X: PDB Molecule:cellular tumor antigen p53;
PDBTitle: solution structure of the c-terminal negative regulatory2 domain of p53 in a complex with ca2+-bound s100b(bb)

Phyre2
1
c3q06B_
2
c2rmnA_
3
c2j1xA_
4
d2ac0a1
5
c2xipA_
6
d1hu8a_
7
c4a9zD_
8
c4a9zC_
9
c3zy1A_
10
c2wttL_
11
d3saka_
12
c2wttN_
13
c2wttH_
14
c2wqjK_
15
d1t4wa_
16
c2k8fB_
17
d1hs5a_
18
d1aiea_
19
c2j10B_
20
c2j10A_
21
22
23
24
25
c2l14B_
26
27
28
29
c1dt7Y_
30
c1dt7X_
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3q06B_
100.0 86 PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity
2c2rmnA_
100.0 51 PDB header:cell cycle, antitumor protein
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: the solution structure of the p63 dna-binding domain
3c2j1xA_
100.0 88 PDB header:nuclear protein
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: human p53 core domain mutant m133l-v203a-y220c-n239y-n268d
4d2ac0a1
100.0 89 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
5c2xipA_
100.0 57 PDB header:cell cycle
Chain: A: PDB Molecule:tumour protein p73;
PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution
6d1hu8a_
100.0 99 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
7c4a9zD_
99.3 31 PDB header:transcription
Chain: D: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain
8c4a9zC_
99.3 31 PDB header:transcription
Chain: C: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain
9c3zy1A_
99.3 30 PDB header:transcription
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of the human p63 tetramerization domain
10c2wttL_
99.2 30 PDB header:transcription
Chain: L: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)
11d3saka_
99.2 86 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
12c2wttN_
99.0 32 PDB header:transcription
Chain: N: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)
13c2wttH_
99.0 32 PDB header:transcription
Chain: H: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)
14c2wqjK_
98.6 43 PDB header:transcription
Chain: K: PDB Molecule:tumor protein p73;
PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain
15d1t4wa_
98.6 21 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
16c2k8fB_
98.6 72 PDB header:transferase/transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structural basis for the regulation of p53 function by p300
17d1hs5a_
98.6 79 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
18d1aiea_
98.4 87 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
19c2j10B_
98.3 87 PDB header:transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
20c2j10A_
98.3 87 PDB header:transcription
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
21c2j10D_
not modelled 98.3 87 PDB header:transcription
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
22c2j11D_
not modelled 98.3 81 PDB header:transcription
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant y327s t329g q331g
23c2wqjM_
not modelled 98.3 41 PDB header:transcription
Chain: M: PDB Molecule:tumor protein p73;
PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain
24d1a1ua_
not modelled 98.2 79 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
25c2l14B_
97.7 62 PDB header:protein binding
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of cbp nuclear coactivator binding domain in complex with2 p53 tad
26c3zy0C_
not modelled 96.9 41 PDB header:transcription
Chain: C: PDB Molecule:tumor protein p63;
PDBTitle: crystal structure of a truncated variant of the human p632 tetramerization domain lacking the c-terminal helix
27c2ly4B_
not modelled 96.9 61 PDB header:nuclear protein/antitumour protein
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: hmgb1-facilitated p53 dna binding occurs via hmg-box/p532 transactivation domain interaction and is regulated by the acidic3 tail
28c1q2iA_
not modelled 92.1 87 PDB header:antitumor protein
Chain: A: PDB Molecule:pnc27;
PDBTitle: nmr solution structure of a peptide from the mdm-2 binding2 domain of the p53 protein that is selectively cytotoxic to3 cancer cells
29c1dt7Y_
91.5 70 PDB header:signaling protein
Chain: Y: PDB Molecule:cellular tumor antigen p53;
PDBTitle: solution structure of the c-terminal negative regulatory2 domain of p53 in a complex with ca2+-bound s100b(bb)
30c1dt7X_
91.5 70 PDB header:signaling protein
Chain: X: PDB Molecule:cellular tumor antigen p53;
PDBTitle: solution structure of the c-terminal negative regulatory2 domain of p53 in a complex with ca2+-bound s100b(bb)
31c3dacB_
not modelled 67.7 77 PDB header:cell cycle
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain
32c1jspA_
not modelled 63.9 68 PDB header:dna binding protein
Chain: A: PDB Molecule:tumor protein p53;
PDBTitle: nmr structure of cbp bromodomain in complex with p53 peptide
33c2xdvA_
not modelled 63.1 32 PDB header:nuclear protein
Chain: A: PDB Molecule:myc-induced nuclear antigen;
PDBTitle: crystal structure of the catalytic domain of flj14393
34c3dacP_
not modelled 57.6 83 PDB header:cell cycle
Chain: P: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain
35c4diqA_
not modelled 46.5 40 PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase no66;
PDBTitle: crystal structure of human no66
36c3gycB_
not modelled 25.3 43 PDB header:hydrolase
Chain: B: PDB Molecule:putative glycoside hydrolase;
PDBTitle: crystal structure of putative glycoside hydrolase (yp_001304622.1)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution
37d1vrba1
not modelled 25.1 20 Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Asparaginyl hydroxylase-like
38c4joiA_
not modelled 21.0 21 PDB header:dna binding protein
Chain: A: PDB Molecule:cst complex subunit stn1;
PDBTitle: crystal structure of the human telomeric stn1-ten1 complex
39d1iknc_
not modelled 19.7 18 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
40c3cguB_
not modelled 19.2 44 PDB header:hormone/signaling protein
Chain: B: PDB Molecule:protein giant-lens;
PDBTitle: crystal structure of unliganded argos
41c2b3gB_
not modelled 15.6 50 PDB header:replication
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53n (fragment 33-60) bound to rpa70n
42d1ef1c_
not modelled 14.8 21 Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Moesin tail domain
Family:Moesin tail domain
43c4gopB_
not modelled 14.7 21 PDB header:dna binding protein/dna
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure and conformational change of a replication protein a2 heterotrimer bound to ssdna
44c2pi2A_
not modelled 11.7 11 PDB header:replication, dna binding protein
Chain: A: PDB Molecule:replication protein a 32 kda subunit;
PDBTitle: full-length replication protein a subunits rpa14 and rpa32
45d1e7ua3
not modelled 11.1 25 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
46d1e8ya3
not modelled 11.1 36 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
47d1w5sa1
not modelled 10.6 25 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
48d2pi2a1
not modelled 10.2 11 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
49c3kf6A_
not modelled 10.2 13 PDB header:structural protein
Chain: A: PDB Molecule:protein stn1;
PDBTitle: crystal structure of s. pombe stn1-ten1 complex
50c3czdA_
not modelled 8.6 42 PDB header:hydrolase
Chain: A: PDB Molecule:glutaminase kidney isoform;
PDBTitle: crystal structure of human glutaminase in complex with l-glutamate
51c3ss4C_
not modelled 8.5 42 PDB header:hydrolase
Chain: C: PDB Molecule:glutaminase c;
PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
52c3ih9A_
not modelled 8.4 29 PDB header:hydrolase
Chain: A: PDB Molecule:salt-tolerant glutaminase;
PDBTitle: crystal structure analysis of mglu in its tris form
53c2dfwA_
not modelled 8.2 29 PDB header:hydrolase
Chain: A: PDB Molecule:salt-tolerant glutaminase;
PDBTitle: crystal structure of a major fragment of the salt-tolerant2 glutaminase from micrococcus luteus k-3
54c3lsoA_
not modelled 8.1 45 PDB header:membrane protein
Chain: A: PDB Molecule:putative membrane anchored protein;
PDBTitle: crystal structure of putative membrane anchored protein from2 corynebacterium diphtheriae
55c1pxeA_
not modelled 8.0 26 PDB header:metal binding protein
Chain: A: PDB Molecule:neural zinc finger transcription factor 1;
PDBTitle: solution structure of a cchhc domain of neural zinc finger2 factor-1
56d1regx_
not modelled 8.0 23 Fold:Ferredoxin-like
Superfamily:Translational regulator protein regA
Family:Translational regulator protein regA
57c2pbyB_
not modelled 7.9 26 PDB header:hydrolase
Chain: B: PDB Molecule:glutaminase;
PDBTitle: probable glutaminase from geobacillus kaustophilus hta426
58c1zldA_
not modelled 7.9 54 PDB header:toxin
Chain: A: PDB Molecule:ptr necrosis toxin;
PDBTitle: crystal structure of a rgd-containing host-selective toxin:2 pyrenophora tritici-repentis ptr toxa
59d1o5wa2
not modelled 7.9 33 Fold:FAD-linked reductases, C-terminal domain
Superfamily:FAD-linked reductases, C-terminal domain
Family:L-aminoacid/polyamine oxidase
60d2je8a3
not modelled 7.9 16 Fold:Immunoglobulin-like beta-sandwich
Superfamily:beta-Galactosidase/glucuronidase domain
Family:beta-Galactosidase/glucuronidase domain
61c3uo9B_
not modelled 7.6 42 PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial;
PDBTitle: crystal structure of human gac in complex with glutamate and bptes
62d1ko7a2
not modelled 7.4 19 Fold:PEP carboxykinase-like
Superfamily:PEP carboxykinase-like
Family:HPr kinase HprK C-terminal domain
63d1ydua1
not modelled 7.2 19 Fold:At5g01610-like
Superfamily:At5g01610-like
Family:At5g01610-like
64c1t0pB_
not modelled 6.9 19 PDB header:immune system
Chain: B: PDB Molecule:intercellular adhesion molecule-3;
PDBTitle: structural basis of icam recognition by integrin alpahlbeta2 revealed2 in the complex structure of binding domains of icam-3 and alphalbeta23 at 1.65 a
65d1u60a_
not modelled 6.8 29 Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:Glutaminase
66c2q37A_
not modelled 6.6 30 PDB header:plant protein, lyase
Chain: A: PDB Molecule:ohcu decarboxylase;
PDBTitle: crystal structure of ohcu decarboxylase in the presence of2 (s)-allantoin
67d2q37a1
not modelled 6.6 30 Fold:UraD-like
Superfamily:UraD-Like
Family:UraD-like
68c1svcP_
not modelled 6.4 15 PDB header:transcription/dna
Chain: P: PDB Molecule:protein (nuclear factor kappa-b (nf-kb));
PDBTitle: nfkb p50 homodimer bound to dna
69d1e6vc_
not modelled 6.2 58 Fold:Ferredoxin-like
Superfamily:Methyl-coenzyme M reductase subunits
Family:Methyl-coenzyme M reductase gamma chain
70c1ixtA_
not modelled 6.0 80 PDB header:toxin
Chain: A: PDB Molecule:spasmodic protein tx9a-like protein;
PDBTitle: structure of a novel p-superfamily spasmodic conotoxin2 reveals an inhibitory cystine knot motif
71d1ixta_
not modelled 6.0 80 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Conotoxin
72d2o8ia1
not modelled 6.0 13 Fold:UraD-like
Superfamily:UraD-Like
Family:UraD-like
73d1fx0b1
not modelled 5.7 28 Fold:Left-handed superhelix
Superfamily:C-terminal domain of alpha and beta subunits of F1 ATP synthase
Family:C-terminal domain of alpha and beta subunits of F1 ATP synthase
74d3c7ba1
not modelled 5.5 23 Fold:Ferredoxin-like
Superfamily:4Fe-4S ferredoxins
Family:Ferredoxin domains from multidomain proteins
75d2bosa_
not modelled 5.4 38 Fold:OB-fold
Superfamily:Bacterial enterotoxins
Family:Bacterial AB5 toxins, B-subunits
76c2wxoA_
not modelled 5.1 27 PDB header:transferase
Chain: A: PDB Molecule:phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic
PDBTitle: the crystal structure of the murine class ia pi 3-kinase2 p110delta in complex with as5.
77c3kbyB_
not modelled 5.1 22 PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of hypothetical protein from staphylococcus aureus

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite