Phyre Home Retrieve Phyre Job Id
DateThu Jan 5 10:55:20 GMT 2012
Unique Job IDd16e7afa881f012f


Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2dw3A_
Top template information
PDB header:photosynthesis
Chain: A: PDB Molecule:intrinsic membrane protein pufx;
PDBTitle: solution structure of the rhodobacter sphaeroides pufx2 membrane protein
Confidence and coverage
Confidence: 10.5% Coverage: 39%
12 residues ( 39% of your sequence) have been modelled with 10.5% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

Secondary structure 

SS confidence 

Disorder  ??????

Disorder confidence 


Confidence Key
High(9)                    Low (0)
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

Detailed template information 

Template Alignment Coverage3D Model Confidence
% i.d. Template Information

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0