EXAMPLES OF IMAGES CREATED BY PREPI


These images were created within PREPI. It is important to note that these images can be MANIPULATED INTERACTIVELY within PREPI. These images are not intended to cover all PREPI features but simply to give an general idea of program features. The movies were made by simple auto screen captures within PREPI. In addition PREPI can also produce Raytraced Images (via use of the program POVRAY). 1) 5PTI - C-alpha backbone / Planes / Disulphide Bridges This example illustrates display of C-alpha backbone with TYR & PHE side chains shown as Disks and Disulphide bridges. 2) 5PTI - Ribbon / Hetro-atoms / Disulphide Bridges This example illustrates Ribbon display, Disulphide bridges and hetro atoms. 3) 5PTI - Cylinder & Arrow / Disulphide Bridges This example illustrates display of helices as Cylinders and sheets and arrows. 4) 5PTI - VDW Spheres 5) 4HHB - Cylinder & Ellipsoids / Transparency This example illustrates display of inertial ellipsoids, transparency, helices as Cylinders and Heme as spheres. 6) 2CRD - NMR structure Averaging Cylinderical ribbon and ellipsoidal representations. 7) 4ECH - NMR structure Averaging - Cylinder Colouring Cylinderical ribbon with colouring. 8) 3CRO - DNA-PROTEIN Complex DNA as Ribbon + Ladder and protein as Cylinders + Coil 9) Virus Structure Model Protein - Lipid Model Built using PREPI FREE FORMAT file structure (also see animation) 10) Least squares fitted surface - 6LDH sheet Least squares fitted surface - 1GOX beta-barrel Part of PREPI's Least squares surface (lines,planes,conics,quadrics) fitting options 11) Further Raytraced Examples 100) Modelling by Homology Results

SOME MOVIES CREATED BY PREPI


The images were created and saved by PREPI. However they have been converted to 8-bit GIF format. So the quality is much lower than that originally output by PREPI. These were created by simple (and automatic) screen capture.

  • SMALL PROTEIN - 5PTI Trypsin inhibitor
  • DNA-PROTEIN - 3CRO 434 Cro protein
  • DNA-PROTEIN - 1LCC Lac repressor headpiece
  • NMR STRUCTURE - 2CRD Neurotoxin - Charybdotoxin
  • VIRUS MODEL - Built using prepi free format
  • POLYGON - Built using prepi free format


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