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Job Description | ALS_intensive | Confidence | 97.52% | Date | Tue Feb 21 10:39:47 GMT 2012 |
Rank | 83 | Aligned Residues | 91 |
% Identity | 16% | Template | c1pgvA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:tropomodulin tmd-1; |
PDBTitle: structural genomics of caenorhabditis elegans: tropomodulin2 c-terminal domain
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Resolution | 1.80 Å |
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Query Sequence |   |
P | G | G | T | Q | A | L | W | L | D | G | . |
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S | L | E | P | Q | A | L | L | G | L | E | N | L | C | H | L | H | L | E | R | N | Q | L | R | S | . |
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L | A | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | T | D | L | K | E | V | N | I | N | N | M | K | R | V | S | K | E | R | I | R | S | L | I | E | A | A | C | N | S | K | H | I | E | K | F | S | L | A | N | T | A | I | S | D | S | E | A | R | G | L | I | E | L | I | E | T | S | P | S | L | R | V | L | N | V | E | S | N | F | L | T | P | E | L | L | A | R | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |
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140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | T | F | A | H | T | P | A | L | A | S | L | G | L | S | N | N | R | L | S | R | L | E | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | S | T | L | V | T | Q | S | I | V | E | F | K | A | D | N | Q | R | Q | S | V | L | G | N |
Template Known Secondary structure |   |
 |  | T | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
315 | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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