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Job DescriptionALS_intensive
Confidence99.93%DateTue Feb 21 10:39:47 GMT 2012
Rank38Aligned Residues163
% Identity39%Templatec2o6sA_
PDB info PDB header:immune systemChain: A: PDB Molecule:variable lymphocyte receptor b; PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b59
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  CPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLG
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Template Sequence  CPSRCSCSGTT. . . . . . VECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK
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   24.....30.... .....40.........50.........60.........70.........80.........90.......
 
   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  LENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELV
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Template Sequence  LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   201........
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Query Sequence  LAGNRLAYL
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Template Sequence  LHDNPWDCT
Template Known Secondary structure 

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B


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   178.180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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