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Job DescriptionALS_intensive
Confidence99.41%DateTue Feb 21 10:39:47 GMT 2012
Rank65Aligned Residues143
% Identity18%Templated2omxa2
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Internalin LRR domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   457..460.........470.........480.........490.........500.........510.........520... ......530....
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Query Sequence  LGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTP. . QPPGLERLWLE
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Template Sequence  LAEKMKTVLGKTNVTDTVS. . QTDLDQVTTLQADRLGIKSIDG. . VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMN
Template Known Secondary structure  TT
SSTTS
..TT


TTS




TT..GGG
TT



SS




GGGTT
TT



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   53......60.........70. ........80.........90... ......100.........110.........120........
 
   535....540.........550. ........560.........570.........580...... ...590
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Query Sequence  GNPWDCGCPLKALRDFA. . . . . . . . . . . . . . . . . . . . . . . LQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASP. PEVV
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Template Conservation                                                                       
     
  
 
Template Sequence  NNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLT
Template Known Secondary structure  SS




GGGTT
TT
S

SS




GGGTT
TT
S

SS




GGGTT
TT
S

SS




GGGTT
T
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   129130.........140.........150.........160.........170.........180.........190.........200........
 
   591........600...
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Query Sequence  GLDLRDLSEAHFA
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Template Sequence  TLERLDISSNKVS
Template Known Secondary structure  T



SS


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   209210.........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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