Return to main results Retrieve Phyre Job Id

Job DescriptionALS_intensive
Confidence99.66%DateTue Feb 21 10:39:47 GMT 2012
Rank60Aligned Residues135
% Identity24%Templatec2je0E_
PDB info PDB header:nuclear proteinChain: E: PDB Molecule:acidic leucine-rich nuclear phosphoprotein 32 family PDBTitle: crystal structure of pp32
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80......... 90.........100.........110.........120.........130.........140.....
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Query Sequence  RLPDGVPGGTQALWLDGNNLSSV. PPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHT
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Template Sequence  ELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI. . ANLPKLNKLKKLELSDNRVSGGLEVLAEKC
Template Known Secondary structure  TT

GGG
S
TT
B
BTTB

S

TT
TT


TTS




..TT



TT



SS


S
T
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   10.........20.........30.........40.........50....... ..60.........70.........80.......
 
   146...150.........160... ......170.........180...... ...190.........200...
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Query Sequence  PALASLGLSNNRLSRLED. GLFEGLGSLWDLNLGWNSLAVLP. . . DAAFRGLGSLRELVLAG
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Template Sequence  PNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD
Template Known Secondary structure  TT


TTS


SGGGGG
TT


TT
GGGGSTT
TT

TTB
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   88.90.........100.........110.........120.........130.........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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