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Job DescriptionALS_intensive
Confidence99.29%DateTue Feb 21 10:39:47 GMT 2012
Rank71Aligned Residues139
% Identity37%Templatec3gozA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:leucine-rich repeat-containing protein; PDBTitle: crystal structure of the leucine-rich repeat-containing2 protein legl7 from legionella pneumophila. northeast3 structural genomics consortium target lgr148
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90....... ..100.........110........
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Query Sequence  GVPGGTQALWLDGNNLSSVPPAAFQNL. . . . . SSLGFLNLQGGQLGSLEPQAL. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSD
Template Known Secondary structure  TS
TT


TTS
GGGS
T

TT



SS
GGGS
TS
TT



SS
GGGS
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   1920.........30.........40.........50.........60.........70.........80.........90........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                      
                    
                                      
Template Sequence  ELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNN
Template Known Secondary structure  TS
TT



SS
GGGS
TTS
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TTS
GGGS
TS
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TTS
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   119120.........130....... ..140.........150.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGLENLCHLHLERNQLRSL. . . . ALGTFAHTPALASL
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Template Conservation                                                  
  
 

 
 
       
   
     
  
Template Sequence  LASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTV
Template Known Secondary structure  GGGS
TS
TT


TTS
GGGS
S
TT



SS





TTTTTTT
S
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   152.......160...... ...170.........180.........190.........200.........
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Query Sequence  GLSNNRLSRLEDGLF. . . . EGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYL
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Template Sequence  YLDYDIVKNXSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSL
Template Known Secondary structure  TT

TTSTT


TTS
B

GGG
T


TTT
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   259260.........270.........280.........290.........300.........310.........320
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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