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Job Description | ALS_intensive | Confidence | 98.87% | Date | Tue Feb 21 10:39:47 GMT 2012 |
Rank | 75 | Aligned Residues | 138 |
% Identity | 14% | Template | c2p1nE_ |
PDB info |
PDB header:signaling protein | Chain: E: PDB Molecule:transport inhibitor response 1 protein; |
PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase
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Resolution | 2.50 Å |
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74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | G | T | Q | A | L | W | L | D | G | N | N | L | S | S | V | P | P | A | A | F | Q | N | L | S | S | L | G | F | L | N | L | Q | G | G | Q | L | G | S | L | E | P | Q | A | L | . |
L | G | L | E | N | L | C | H | L | H | L | E | R | N | Q | L | R | S | L | . |
A | L | G | T | F | A | H | T | P | A | L | A | S | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | D | L | R | R | L | S | L | S | G | L | L | T | D | K | V | F | E | Y | I | G | T | Y | A | K | K | M | E | M | L | S | V | A | F | A | G | D | S | D | L | G | M | H | H | V | L | S | G | C | D | S | L | R | K | L | E | I | R | D | C | P | F | G | D | K | A | L | L | A | N | A | S | K | L | E | T | M | R | S | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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432 | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . |
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152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | L | S | N | N | R | L | S | R | L | E | D | G | L | F | E | G | . |
L | G | S | L | W | D | L | N | L | G | W | N | S | L | A | V | L | P | D | A | A | F | R | G | L | G | S | L | R | E | L | V | L | A | G | N | R | L | A | Y | L | Q | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
W | M | S | S | C | S | V | S | F | G | A | C | K | L | L | G | Q | K | M | P | K | L | N | V | E | V | I | D | E | R | G | A | P | D | S | R | P | E | S | C | P | V | E | R | V | F | I | Y | R | T | V | A | G | P | R | F | D | M | P | G | F |
Template Known Secondary structure |   |
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| B |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
512 | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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