|   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | V | C | S | Y | D | D | D | A | D | E | L | S | V | F | C | S | S | R | N | L | T | R | L | P | D | G | V | P | G | G | T | Q | A | L | W | L | D | G | N | N | L | S | S | V | P | P | A | A | F | Q | N | L | S | S | L | G | F | L | N | L | Q | G | G | Q | L | G | S | L | E | P | Q | A | L | L | G | L | E | N | L |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   | . | . | . | . | . |   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|
Template Sequence |   |
L | S | C | D | A | S | G | . |
. |
. |
. |
. |
V | C | D | G | R | S | R | S | F | T | S | I | P | S | G | L | T | A | A | M | K | S | L | D | L | S | F | N | K | I | T | Y | I | G | H | G | D | L | R | A | C | A | N | L | Q | V | L | I | L | K | S | S | R | I | N | T | I | E | G | D | A | F | Y | S | L | G | S | L |
Template Known Secondary structure |   |
|  |  |
| T | T | S | . | . | . | . | . |  |  |  |
| T | T | S |
|
| S | S |
|
| S |
|
|
| T | T |
|
|  |  |  |
|
| S | S |
|
|
|  |  |
| S | S | T | T | S | S |
| T | T |
|
|  |  |  |
| T | T | S |
|
|
|  |  |
| T | T | T | T | T | T |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
| . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | H | L | H | L | E | R | N | Q | L | R | S | L | A | L | G | T | F | A | H | T | P | A | L | A | S | L | G | L | S | N | N | R | L | S | R | L | E | D | G | L | . |
F | E | G | L | G | S | L | W | D | L | N | L | G | W | . |
N | S | L | A | V | L | P | D | A | A | F | R | G | L | G | S | L | R | E | L | V | L | A |
Query Conservation |   |
  |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
E | H | L | D | L | S | D | N | H | L | S | S | L | S | S | S | W | F | G | P | L | S | S | L | K | Y | L | N | L | M | G | N | P | Y | Q | T | L | G | V | T | S | L | F | P | N | L | T | N | L | Q | T | L | R | I | G | N | V | E | T | F | S | E | I | R | R | I | D | F | A | G | L | T | S | L | N | E | L | E | I | K |
Template Known Secondary structure |   |
|  |  |  |
| T | T | S |
|
|
| S |
|
|  |  |  |  | T | T |
| T | T |
|
|  |  |  |
| T | T |
|
|
| S | S | S |
| S | S |
| S |
| T | T |
| T | T |
|
|  |  |  |  |  |  | S | S | S |
|
|  |  |
| T | T | T | T | T | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
G | N | R | L | A | Y | L | Q | P | A | L | F | S | G | L | A | E | L | R | E | L | D | L | S | R | N | A | L | R | A | I | K | A | N | V | F | V | Q | L | P | R | L | Q | K | L | Y | L | D | R | N | L | I | A | A | V | A | P | G | A | F | L | G | L | K | A | L | R | W | L | D | L | S | . |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | L | S | L | R | N | Y | Q | S | Q | S | L | K | S | I | R | D | I | H | H | L | T | L | H | L | S | E | S | A | F | L | L | E | I | F | A | D | I | L | S | S | V | R | Y | L | E | L | R | D | T | N | L | A | R | F | Q | F | S | P | L | P | V | D | E | V | S | S | P | M | K | K | L | A | F | R | G | S | V | L | T |
Template Known Secondary structure |   |
 | T | T |
|
|  |  |
| T | T | T | T | T | T |
| S |  |  |  |  |  |  |  |  |
| S | B | S | T | T |  |  |  |  |  |  |  | S | T | T | T | B | S |  |  |  |  |  | S |
| B |
| T | T |
|
|
|
|
|
| S | S |
|
|
|
|
|
|
|
|  |  |  |  |  | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | N | R | V | A | G | L | L | E | D | T | F | P | G | L | L | G | L | R | V | L | R | L | S | H | N | A | I | A | S | L | R | P | R | T | F | K | D | L | H | F | L | E | E | L | Q | L | G | H | N | R | I | R | Q | L | A | E | R | S | F | E | G | L | G | Q | L | E | V | L | T |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
D | E | S | F | N | E | L | L | K | L | L | R | Y | I | L | E | L | S | E | V | E | F | D | D | C | T | L | N | G | L | G | D | F | N | P | S | E | S | D | V | V | S | E | L | G | K | V | E | T | V | T | I | R | R | L | H | I | P | Q | F | Y | L | F | Y | D | L | S | T | V | Y | S | L | L | E | K | V | K | R | I | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | G | G | G | G | G |
| T | T |
|
|  |  |  |  |  | S |
|  |  |  |
|
| S |
|
|
|
|
| T | T | T |
|
|
|
|
| T | T |
|
|  |  |  |  |  | S |
| B |
| S |
| G | G | G | S |
|
|
|
|  |  |  |  |  | S | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
263 | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |
  |
  |   |
345 | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | H | N | Q | L | Q | E | V | K | A | G | A | F | L | G | L | T | N | V | A | V | M | N | L | S | G | N | C | L | R | N | L | P | E | Q | V | F | R | G | L | G | K | L | H | S | L | H | L | E | G | S | C | L | G | R | I | R | P | H | T | F | T | G | L | S | G | L | R | R | L | F | L | K | D | N | G | L | V | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
V | E | N | S | K | V | F | L | V | P | C | S | F | S | Q | H | L | K | S | L | E | F | L | D | L | S | E | N | L | M | V | E | E | Y | L | K | N | S | A | C | K | G | A | W | P | S | L | Q | T | L | V | L | S | Q | N | H | L | R | S | M | Q | K | T | G | E | I | L | L | T | L | K | N | L | T | S | L | D | I | S | R |
Template Known Secondary structure |   |
 |  | S | S |
|
|
|
|
|
|  |  |  |  |  |  |
| T | T |
|
|  |  |  |
|
| S | S |
|
|
|  |  |  |  |  |  |  | T |
| T | T | S | S | T | T |
|
|  |  |  |
| T | T | S |
|
|
|
|  |  |  |  |  |  |  | G | G | G |
| T | T |
|
|  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
343 | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . |
  |
  |   |
|
425 | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . |
Predicted Secondary structure |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
I | E | E | Q | S | L | W | G | L | A | E | L | L | E | L | D | L | T | S | N | Q | L | T | H | L | P | H | R | L | F | Q | G | L | G | K | L | E | Y | L | L | L | S | R | N | R | L | A | E | L | P | A | D | A | L | G | P | L | Q | R | A | F | W | L | D | V | S | H | N | R | L | E | A | L | P | N | S | L | L | A |
Query Conservation |   |
. |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   | . | . | . | . |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   | . |
Template Sequence |   |
N | T | F | H | P | M | P | D | S | C | Q | W | P | E | K | M | R | F | L | N | L | S | S | T | G | I | R | V | V | K | T | C | I | P | Q | T | L | E | V | L | D | V | S | N | N | N | L | D | S | F | S | L | . |
. |
. |
. |
F | L | P | R | L | Q | E | L | Y | I | S | R | N | K | L | K | T | L | P | D | A | S | L | . |
Template Known Secondary structure |   |
|
|
|
|
|
|
| S |
|
|
|
|
| T | T |
|
|  |  |  |
| T | T | S |
|
| S |
|
|
| T | T | S |
| T | T |
| S |  |  |  |
|
| S | S |
|
| S |
|
|
|
| . | . | . | . |
|
| T | T |
|
|  |  |  |
|
| S | S |
|
| S | S |
|
|
| G | G | G | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
423 | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | |
|
|
|
. | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | |
  |
  |   |
504 | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | |
|
|
|
. | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | |
. | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | G | R | L | R | Y | L | S | L | R | N | N | S | L | R | T | F | T | P | Q | . |
. |
. |
. |
P | P | G | L | E | R | L | W | L | E | G | N | P | W | D | C | G | C | P | . |
L | K | A | L | R | D | F | A | L | Q | N | P | S | A | V | P | R | F | V | Q | A | I | C | E | G | D | D | C | Q | P | P | A | Y | T | Y |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . |
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |
|   | . |
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
. |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
. |
F | P | V | L | L | V | M | K | I | S | R | N | Q | L | K | S | V | P | D | G | I | F | D | R | L | T | S | L | Q | K | I | W | L | H | T | N | P | W | D | C | S | C | P | R | I | D | Y | L | S | R | W | L | N | K | N | S | Q | K | E | Q | G | S | A | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
. |
| T | T |
|
|  |  |  |
|
| S | S |
|
|
|
|
|
| T | T | G | G | G | G |
| T | T |
|
|  |  |  |
|
| S | S |
| B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  | S |
|
| B | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
. |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
498 | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
579 | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | I | T | C | A | S | P | P | E | V | V | G | L | D | L | R | D | L | S | E | A | H | F | A | P |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
. | . | . | . |
|   |   |
| . | . | . | . |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
Template Sequence |   |
. |
. |
. |
. |
C | S | G | S | . |
. |
. |
. |
G | K | P | V | R | S | I | I | . |
. |
. |
. |
C | P |
Template Known Secondary structure |   |
. | . | . | . | B | T | T | T | . | . | . | . |
|
| B | G | G | G |
|
| . | . | . | . |
|
|
Template Predicted Secondary structure |   |
. | . | . | . |  |
|
|
| . | . | . | . |
|
|
|  |  |  |
|
| . | . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
562 | . | . | . | |
|
|
|
. | . | . | . | 570 | . | . | . | |
|
|
|
. | . |
  |