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Job DescriptionALS_intensive
Confidence99.92%DateTue Feb 21 10:39:47 GMT 2012
Rank42Aligned Residues431
% Identity17%Templated1z7xw1
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like 28-residue LRR
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80......... 90.........100.........110... ......120.........130.........140.....
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Query Sequence  GTQALWLDGNNLSSV. PPAAFQNLSSLGFLNLQGGQLGSL. . . . EPQALLGLENLCHLHLERNQLRSLALGTFAHT. . . .
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Template Conservation   
  



 
 
           
  
  
 

 
 
       
   
  
  
  



 
 
       
   
   
Template Sequence  DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   146...150.........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  . PALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELD
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Template Conservation     
  
 
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Template Sequence  SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T




TTS

BGGGTTS
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SSB.......................................
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   83......90.........100.........110.........120...
 
   225....230.........240.........250.........260.........270.........280.........290.........300....
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Query Sequence  LSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIAS
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Template Conservation  ............                                                                    
Template Sequence  . . . . . . . . . . . . LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQ
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   124.....130.........140.........150.........160.........170.........180.........190.
 
   305....310.........320.........330.........340.........350.........360.........370.........380....
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Query Sequence  LRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRG
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Template Conservation                                                                                  
Template Sequence  GLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKG
Template Known Secondary structure  S





TTS

BTT
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   192.......200.........210.........220.........230.........240.........250.........260.........270.
 
   385....390.........400.........410.........420.........430.........440.........450.........460....
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Query Sequence  LGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLL
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Template Sequence  CGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR
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   272.......280.........290.........300.........310.........320.........330.........340.........350.
 
   465....470.........480.........490....... ..500.........510.........520... ......530.
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Query Sequence  LSRNRLAELPADALGPLQRAFWLDVSHNRLEAL. . . . PNSLLAPLGRLRYLSLRNNSLRTFTP. . . . . . . . . QPPGLERL
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Template Conservation                     
  
 

 
 
       
   
  
  
  



 
 

  
   
   
      
  
Template Sequence  LEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQL
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TSTT




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   352.......360.........370.........380.........390.........400.........410.........420.........430.
 
   532.......540.........550.......
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Query Sequence  WLEGNPWDCGCPLKALRDFALQNPSA
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Template Sequence  VLYDIYWSEE. MEDRLQALEKDKPSL
Template Known Secondary structure 
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   432.......440. ........450......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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