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Job Description | ALS_intensive | Confidence | 99.95% | Date | Tue Feb 21 10:39:47 GMT 2012 |
Rank | 34 | Aligned Residues | 120 |
% Identity | 29% | Template | c2r9uC_ |
PDB info |
PDB header:immune system | Chain: C: PDB Molecule:variable lymphocyte receptor; |
PDBTitle: crystal structure of lamprey variable lymphocyte receptor 29132 ectodomain
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Resolution | 2.10 Å |
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40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | C | P | A | A | C | V | C | S | Y | D | D | D | A | D | E | L | S | V | F | C | S | S | R | N | L | T | R | L | P | D | G | V | P | G | G | T | Q | A | L | W | L | D | G | N | N | L | S | S | V | P | P | A | A | F | Q | N | L | S | S | L | G | F | L | N | L | Q | G | G | Q | L | G | S | L | E | P | Q | A | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | C | P | S | Q | C | S | C | D | Q | T | L | . |
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V | N | C | Q | N | I | R | L | A | S | V | P | A | G | I | P | T | D | K | Q | R | L | W | L | N | N | N | Q | I | T | K | L | E | P | G | V | F | D | H | L | V | N | L | Q | Q | L | Y | F | N | S | N | K | L | T | A | I | P | T | G | V | F | D |
Template Known Secondary structure |   |
S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | |
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. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
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120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | L | E | N | L | C | H | L | H | L | E | R | N | Q | L | R | S | L | A | L | G | T | F | A | H | T | P | A | L | A | S | L | G | L | S | N | N | R | L | S | R | L | E | D | G | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | L | T | Q | L | T | Q | L | D | L | N | D | N | H | L | K | S | I | P | R | G | A | F | D | N | L | K | S | L | T | H | I | Y | L | Y | N | N | P | W | D | C | E | C | R | D | I |
Template Known Secondary structure |   |
T |
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| B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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