Emaill.a.kelley@imperial.ac.uk
DescriptionALS_intensive
DateTue Feb 21 10:39:47 GMT 2012
Unique Job IDab092f3aeac69643

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3fxiA_



100.0 21 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4;
PDBTitle: crystal structure of the human tlr4-human md-2-e.coli lps ra complex
2c2a0zA_



100.0 22 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 3;
PDBTitle: the molecular structure of toll-like receptor 3 ligand binding domain
3c2z64A_



100.0 23 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4;
PDBTitle: crystal structure of mouse tlr4 and mouse md-2 complex
4c3j0aB_



100.0 24 PDB header:immune system
Chain: B: PDB Molecule:toll-like receptor 5;
PDBTitle: homology model of human toll-like receptor 5 fitted into an electron2 microscopy single particle reconstruction
5c2z63A_



100.0 20 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tv8 hybrid of human tlr4 and hagfish vlrb.61
6c1ziwA_



100.0 22 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 3;
PDBTitle: human toll-like receptor 3 extracellular domain structure
7c2z81A_



100.0 20 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 2, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by binding of a2 tri-acylated lipopeptide
8c3a79A_



100.0 21 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 2, variable lymphocyte receptor b;
PDBTitle: crystal structure of tlr2-tlr6-pam2csk4 complex
9c2id5D_



100.0 32 PDB header:ligand binding protein,membrane protein
Chain: D: PDB Molecule:leucine rich repeat neuronal 6a;
PDBTitle: crystal structure of the lingo-1 ectodomain
10c3rgxA_



100.0 19 PDB header:transferase
Chain: A: PDB Molecule:protein brassinosteroid insensitive 1;
PDBTitle: structural insight into brassinosteroid perception by bri1
11c3a79B_



100.0 20 PDB header:immune system
Chain: B: PDB Molecule:toll-like receptor 6, variable lymphocyte receptor b;
PDBTitle: crystal structure of tlr2-tlr6-pam2csk4 complex
12c2z7xB_



100.0 18 PDB header:immune system
Chain: B: PDB Molecule:toll-like receptor 1, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by binding of a2 tri-acylated lipopeptide
13d1ozna_



100.0 37 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
14c3rg1I_



100.0 16 PDB header:immune system
Chain: I: PDB Molecule:cd180 molecule;
PDBTitle: crystal structure of the rp105/md-1 complex
15c3ojaB_



100.0 25 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
16c2z66A_



100.0 31 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor b, toll-like receptor 4;
PDBTitle: crystal structure of the vt3 hybrid of human tlr4 and hagfish vlrb.61
17c2z80A_



100.0 22 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 2, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by binding of a2 tri-acylated lipopeptide
18c2o6qA_



100.0 59 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor a;
PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors a29
19c2omwA_



100.0 13 PDB header:cell invasion/cell adhesion
Chain: A: PDB Molecule:internalin-a;
PDBTitle: crystal structure of inla s192n y369s/mec1 complex
20d2omza2



100.0 19 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Internalin LRR domain
21c2v9sC_



not modelled 100.0 39 PDB header:structural protein
Chain: C: PDB Molecule:slit homolog 2 protein n-product;
PDBTitle: second lrr domain of human slit2
22c2v70D_



not modelled 100.0 31 PDB header:structural protein
Chain: D: PDB Molecule:slit homolog 2 protein n-product;
PDBTitle: third lrr domain of human slit2
23c2ft3B_



not modelled 100.0 21 PDB header:structural protein, signaling protein
Chain: B: PDB Molecule:biglycan;
PDBTitle: crystal structure of the biglycan dimer core protein
24d1xkua_



not modelled 100.0 29 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
25c1xkuA_



not modelled 100.0 29 PDB header:structural protein
Chain: A: PDB Molecule:decorin;
PDBTitle: crystal structure of the dimeric protein core of decorin, the2 archetypal small leucine-rich repeat proteoglycan
26c2z62A_



not modelled 100.0 28 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tv3 hybrid of human tlr4 and hagfish vlrb.61
27d1p9ag_



not modelled 100.0 60 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
28c3o6nA_



not modelled 100.0 27 PDB header:protein binding
Chain: A: PDB Molecule:apl1;
PDBTitle: crystal structure of apl1 leucine-rich repeat domain
29c1ookG_



not modelled 100.0 45 PDB header:hydrolase
Chain: G: PDB Molecule:platelet glycoprotein ib alpha chain precursor;
PDBTitle: crystal structure of the complex of platelet receptor gpib-alpha and2 human alpha-thrombin
30c2xotA_



not modelled 100.0 30 PDB header:cell adhesion
Chain: A: PDB Molecule:amphoterin-induced protein 1;
PDBTitle: crystal structure of neuronal leucine rich repeat protein amigo-1
31d1ogqa_



not modelled 100.0 22 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Polygalacturonase inhibiting protein PGIP
32c3e6jA_



not modelled 100.0 36 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor diversity region;
PDBTitle: crystal structure of variable lymphocyte receptor (vlr) rbc36 in2 complex with h-trisaccharide
33c3bz5A_



not modelled 100.0 13 PDB header:cell adhesion
Chain: A: PDB Molecule:internalin-j;
PDBTitle: functional domain of inlj from listeria monocytogenes2 includes a cysteine ladder
34c2r9uC_



not modelled 100.0 29 PDB header:immune system
Chain: C: PDB Molecule:variable lymphocyte receptor;
PDBTitle: crystal structure of lamprey variable lymphocyte receptor 29132 ectodomain
35c2o6rA_



not modelled 100.0 36 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor b;
PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b61
36c2ifgB_



not modelled 99.9 17 PDB header:transferase
Chain: B: PDB Molecule:high affinity nerve growth factor receptor;
PDBTitle: structure of the extracellular segment of human trka in complex with2 nerve growth factor
37c3ojaA_



not modelled 99.9 23 PDB header:protein binding
Chain: A: PDB Molecule:leucine-rich immune molecule 1;
PDBTitle: crystal structure of lrim1/apl1c complex
38c2o6sA_



not modelled 99.9 39 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor b;
PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b59
39d1w8aa_



not modelled 99.9 34 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
40c3g3aA_



not modelled 99.9 34 PDB header:hydrolase/immune system
Chain: A: PDB Molecule:variable lymphocyte receptor vlrb.2d;
PDBTitle: structure of a lamprey variable lymphocyte receptor in2 complex with a protein antigen
41c2wfhB_



not modelled 99.9 33 PDB header:splicing
Chain: B: PDB Molecule:slit homolog 2 protein c-product;
PDBTitle: the human slit 2 dimerization domain d4
42d1z7xw1



not modelled 99.9 17 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:RNI-like
Family:28-residue LRR
43c3g06A_



not modelled 99.9 48 PDB header:ligase
Chain: A: PDB Molecule:ssph2 (leucine-rich repeat protein);
PDBTitle: the salmonella virulence effector ssph2 functions as a2 novel e3 ligase
44d2bnha_



not modelled 99.9 16 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:RNI-like
Family:28-residue LRR
45c1g9uA_



not modelled 99.9 23 PDB header:toxin
Chain: A: PDB Molecule:outer protein yopm;
PDBTitle: crystal structure of yopm-leucine rich effector protein from yersinia2 pestis
46d1jl5a_



not modelled 99.9 23 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Leucine rich effector protein YopM
47c3o53A_



not modelled 99.9 16 PDB header:protein binding
Chain: A: PDB Molecule:protein lrim1;
PDBTitle: crystal structure of lrim1 leucine-rich repeat domain
48d2ifga3



not modelled 99.9 19 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
49d1xwdc1



not modelled 99.9 30 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
50c3m18A_



not modelled 99.9 34 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor a diversity region;
PDBTitle: crystal structure of variable lymphocyte receptor vlra.r2.1 in complex2 with hen egg lysozyme
51c1wwlA_



not modelled 99.8 38 PDB header:immune system
Chain: A: PDB Molecule:monocyte differentiation antigen cd14;
PDBTitle: crystal structure of cd14
52c1ltxA_



not modelled 99.8 26 PDB header:transferase/protein binding
Chain: A: PDB Molecule:rab geranylgeranyltransferase alpha subunit;
PDBTitle: structure of rab escort protein-1 in complex with rab2 geranylgeranyl transferase and isoprenoid
53c1m9sA_



not modelled 99.8 22 PDB header:signaling protein
Chain: A: PDB Molecule:internalin b;
PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
54c2y5qA_



not modelled 99.8 24 PDB header:protein binding
Chain: A: PDB Molecule:internalin b;
PDBTitle: listeria monocytogenes inlb (internalin b) residues 36-392
55c2uzyA_



not modelled 99.8 17 PDB header:signaling protein/receptor
Chain: A: PDB Molecule:internalin b;
PDBTitle: structure of the human receptor tyrosine kinase met in2 complex with the listeria monocytogenes invasion protein3 inlb: low resolution, crystal form ii
56c1h6uA_



not modelled 99.7 20 PDB header:cell adhesion
Chain: A: PDB Molecule:internalin h;
PDBTitle: internalin h: crystal structure of fused n-terminal2 domains.
57c3rfeB_



not modelled 99.7 33 PDB header:cell adhesion
Chain: B: PDB Molecule:platelet glycoprotein ib beta chain;
PDBTitle: crystal structure of glycoprotein gpib ectodomain
58c3cvrA_



not modelled 99.7 30 PDB header:ligase
Chain: A: PDB Molecule:invasion plasmid antigen;
PDBTitle: crystal structure of the full length ipah3
59c3g04C_



not modelled 99.7 34 PDB header:immune system
Chain: C: PDB Molecule:thyrotropin receptor;
PDBTitle: crystal structure of the tsh receptor in complex with a thyroid-2 stimulating autoantibody
60c2je0E_



not modelled 99.7 24 PDB header:nuclear protein
Chain: E: PDB Molecule:acidic leucine-rich nuclear phosphoprotein 32 family
PDBTitle: crystal structure of pp32
61d2astb2



not modelled 99.6 19 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:RNI-like
Family:Cyclin A/CDK2-associated p19, Skp2
62d2ca6a1



not modelled 99.6 14 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:RNI-like
Family:Rna1p (RanGAP1), N-terminal domain
63c1k5dL_



not modelled 99.5 15 PDB header:signaling protein/signaling activator
Chain: L: PDB Molecule:ran gtpase activating protein 1;
PDBTitle: crystal structure of ran-gppnhp-ranbp1-rangap complex
64d1dcea3



not modelled 99.5 31 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
65d2omxa2



not modelled 99.4 18 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Internalin LRR domain
66c1otnA_



not modelled 99.4 14 PDB header:cell adhesion
Chain: A: PDB Molecule:internalin b;
PDBTitle: calcium-binding mutant of the internalin b lrr domain
67d1a9na_



not modelled 99.4 19 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:U2A'-like
68c1xeuA_



not modelled 99.4 14 PDB header:cell invasion
Chain: A: PDB Molecule:internalin c;
PDBTitle: crystal structure of internalin c from listeria2 monocytogenes
69d1h6ua2



not modelled 99.3 43 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Internalin LRR domain
70d1h6ta2



not modelled 99.3 55 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Internalin LRR domain
71c3gozA_



not modelled 99.3 37 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:leucine-rich repeat-containing protein;
PDBTitle: crystal structure of the leucine-rich repeat-containing2 protein legl7 from legionella pneumophila. northeast3 structural genomics consortium target lgr148
72c2ra8A_



not modelled 99.1 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein q64v53_bacfr;
PDBTitle: crystal structure of the q64v53_bacfr protein from bacteroides2 fragilis. northeast structural genomics consortium target bfr43
73c3sb4B_



not modelled 99.0 15 PDB header:protein binding
Chain: B: PDB Molecule:hypothetical leucine rich repeat protein;
PDBTitle: crystal structure of a hypothetical leucine rich repeat protein2 (bt_1240) from bacteroides thetaiotaomicron vpi-5482 at 1.99 a3 resolution
74d1m9la_



not modelled 99.0 23 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:Outer arm dynein light chain 1
Family:Outer arm dynein light chain 1
75c2p1nE_



not modelled 98.9 14 PDB header:signaling protein
Chain: E: PDB Molecule:transport inhibitor response 1 protein;
PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase
76d1fs2a2



not modelled 98.7 15 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:RNI-like
Family:Cyclin A/CDK2-associated p19, Skp2
77d1koha1



not modelled 98.7 26 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:mRNA export factor tap
78c1kooD_



not modelled 98.6 27 PDB header:rna binding protein
Chain: D: PDB Molecule:tip associating protein;
PDBTitle: the crystal structure and mutational analysis of a novel2 rna-binding domain found in the human tap nuclear mrna3 export factor
79c3oglD_



not modelled 98.6 13 PDB header:protein binding
Chain: D: PDB Molecule:coronatine-insensitive protein 1;
PDBTitle: structure of coi1-ask1 in complex with ja-isoleucine and the jaz12 degron
80c3ogmB_



not modelled 98.6 12 PDB header:protein binding
Chain: B: PDB Molecule:coronatine-insensitive protein 1;
PDBTitle: structure of coi1-ask1 in complex with coronatine and the jaz1 degron
81c3e2jA_



not modelled 98.5 18 PDB header:electron transport
Chain: A: PDB Molecule:atp synthase subunit s, mitochondrial;
PDBTitle: crystal structure of bovine coupling factor b
82c1fqvK_



not modelled 97.9 15 PDB header:ligase
Chain: K: PDB Molecule:skp2;
PDBTitle: insights into scf ubiquitin ligases from the structure of2 the skp1-skp2 complex
83c1pgvA_



not modelled 97.5 16 PDB header:protein binding
Chain: A: PDB Molecule:tropomodulin tmd-1;
PDBTitle: structural genomics of caenorhabditis elegans: tropomodulin2 c-terminal domain
84d1pgva_



not modelled 97.5 16 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:RNI-like
Family:28-residue LRR
85d1io0a_



not modelled 97.2 16 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:RNI-like
Family:28-residue LRR
86c3ghgD_



not modelled 24.4 33 PDB header:blood clotting
Chain: D: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of human fibrinogen
87c1m1jA_



not modelled 17.8 25 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
88c2a45J_



not modelled 15.4 33 PDB header:hydrolase/hydrolase inhibitor
Chain: J: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of the complex between thrombin and the central "e"2 region of fibrin