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Job DescriptionALS_intensive
Confidence99.69%DateTue Feb 21 10:39:47 GMT 2012
Rank57Aligned Residues101
% Identity33%Templatec3rfeB_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:platelet glycoprotein ib beta chain; PDBTitle: crystal structure of glycoprotein gpib ectodomain
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   485....490........ .500.........510.........520.... .....530.........540.........550.........
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Query Sequence  FWLDVSHNRLEALP. NSLLAPLGRLRYLSLRNNSLRTFTPQ. . . . PPGLERLWLEGNPWDCGCPLKALRDFALQNPSAVP
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Template Sequence  TLVDCGRRGLTWASLPTAFP. . VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGRPERAP
Template Known Secondary structure  T

SS


TTTS
S


..TT


TTS

SS

TTTTTT
TT



SS

B
SGGGTSS
SGG
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   10.........20......... 30.........40.........50.........60.........70.........80.......
 
   560.........570.........580.........590.........600.. ...
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Query Sequence  RFVQAICEGDDCQPPAYTYNNITCASPPEVVGLDLRDLSEAHF. APC
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Template Sequence  . . . . . . . . . . . . . . . . . . YRDLRCVAPPALRGRLLPYLAEDELRAAC
Template Known Secondary structure  ..................GTT
B

BSTTTTT
BGGG

TT
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   88.90.........100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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