|   |
457 | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
L | G | K | L | E | Y | L | L | L | S | R | N | R | L | A | E | L | P | A | D | A | L | G | P | L | Q | R | A | F | W | L | D | V | S | H | N | R | L | E | A | L | P | N | S | L | L | A | P | L | G | R | L | R | Y | L | S | L | R | N | N | S | L | R | T | F | T | P | Q | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   | . | . |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|   |
|   |   |
|   |   | . | . |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | A | N | A | V | K | Q | N | L | G | K | Q | S | V | T | D | L | V | . |
. |
S | Q | K | E | L | S | G | V | Q | N | F | N | G | D | N | S | N | I | Q | S | L | A | G | . |
. |
M | Q | F | F | T | N | L | K | E | L | H | L | S | H | N | Q | I | S | D | L | S | P | L | K | D | L | T | K | L | E | E | L | S | V | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
| S |
| T | T | S |  |  | . | . |
|  |  |  |  | T | T |
| S |  |  |  |
| T | T | S |
|
|
|
|
| T | T | . | . | G | G | G |
| T | T |
|
|  |  |  |
|
| S | S |
|
|
|
|
| G | G | G | T | T |
| S | S |
|
|  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . |
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | |
|
|
. | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | G | L | E | R | L | W | L | E | G | N | P | W | D | C | G | C | P | . |
. |
. |
L | K | A | L | R | D | F | A | L | Q | N | P | S | A | V | P | R | F | V | Q | A | I | C | E | G |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |
|   | . | . | . |
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|
|   |
|   |   | . | . |
|   |   |
|
Template Sequence |   |
R | N | R | L | K | N | L | N | G | I | P | S | A | C | L | S | R | L | F | L | D | N | N | E | L | R | D | T | D | S | L | I | H | L | K | N | L | E | I | L | S | I | R | N | N | K | L | K | S | I | V | M | L | G | F | L | S | K | L | E | V | L | D | L | H | G | N | E | I | T | N | T | G | G | . |
. |
L | T | R | L |
Template Known Secondary structure |   |
S | S |
|
| S |
|
| T | T |
|
|
| S | S |
|
|  |  |  |
|
| S | S |
|
| S | B | S | G | G | G | T | T |
| T | T |
|
|  |  |  |
| T | T | S |
|
|
| B |
| G | G | G | G | G |
| T | T |
|
|  |  |  |
| T | T | S |
|
|
| B |
| T | T | . | . | S | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | |
|
. | . | . | . |
  |
  |   |
569 | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | C | Q | P | P | A | Y | T | Y | N | N | I | T | C | A | S | P | P | E | V | V | G | L | D | L | R | D | L | S | E | A | H | F |
Query Conservation |   |
  |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
K | K | V | N | W | I | D | L | T | G | Q | K | C | V | N | E | P | V | K | Y | Q | P | E | L | Y | I | T | N | T | V | K | D | P | D |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
| S |  |  |  |  |  |
|
|
| B |
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |