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Job DescriptionALS______
Confidence97.91%DateThu Feb 9 13:17:35 GMT 2012
Rank82Aligned Residues101
% Identity15%Templatec1fqvK_
PDB info PDB header:ligaseChain: K: PDB Molecule:skp2; PDBTitle: insights into scf ubiquitin ligases from the structure of2 the skp1-skp2 complex
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80........ .90.........100....... ..110.........120.........130.........140..... ....150
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Query Sequence  GGTQALWLDGNNLSS. VPPAAFQNLSSLGFLNLQG. GQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHT. PALAS
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Template Sequence  PNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI. . . . VPDGTLQLLKEALPH
Template Known Secondary structure  TT
S
TT
TT

GGGTT
SS


TT
TTS
GGGGGGGGS
SS


TTS....S

TT
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   322.......330.........340.........350.........360.........370.........380.. .......390.......
 
   151........160.........170........
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Query Sequence  LGLSNNRLSRLEDGLFEGLGSLWDLNLG
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Template Sequence  LQINCSHFTTIARPTIGNKKNQEIWGIK
Template Known Secondary structure  S
BS


S

TT
S

SSS

S
BTTB
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   398.400.........410.........420.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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