Return to main results Retrieve Phyre Job Id

Job DescriptionALS______
Confidence99.77%DateThu Feb 9 13:17:35 GMT 2012
Rank53Aligned Residues162
% Identity22%Templatec1m9sA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   433......440.........450.........460.........470.........480.........490.........500.........510..
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Query Sequence  LAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLS
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Template Sequence  LNSIDQIIANNSDIKSV. . QGIQYLPNVTKLFLNGNKLTDIKP. . LTNLKNLGWLFLDENKIKDLSS. . LKDLKKLKSLS
Template Known Secondary structure  TT



B
TT





..TTGGG
TT


TTS




GG..GGG
TT



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TT..STT
TT

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   75....80.........90. ........100.........110..... ....120.........130....... ..140........
 
   513......520... ......530.........540... ......550.........560.........570.........580......
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Query Sequence  LRNNSLRTFTP. . QPPGLERLWLEGNPWDCGCP. . . LKALRDFALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASP.
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Template Sequence  LEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP. . LAGLTKLQNLYLSKNHISDLRAL
Template Known Secondary structure 
TTS




GGGGG
TT
S

SS




GGGGS
TT
S

SS




GG..GTT
TT



SS


B
GGG
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   149150.........160.........170.........180.........190.........200... ......210.........220......
 
   587..590.........600..
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Query Sequence  PEVVGLDLRDLSEAHF
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Template Sequence  AGLKNLDVLELFSQEC
Template Known Secondary structure  TT
TT
S

S
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   227..230.........240..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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