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Job Description | ALS______ | Confidence | 99.69% | Date | Thu Feb 9 13:17:35 GMT 2012 |
Rank | 57 | Aligned Residues | 101 |
% Identity | 33% | Template | c3rfeB_ |
PDB info |
PDB header:cell adhesion | Chain: B: PDB Molecule:platelet glycoprotein ib beta chain; |
PDBTitle: crystal structure of glycoprotein gpib ectodomain
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Resolution | 1.25 Å |
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485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | |
. | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | |
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. | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | W | L | D | V | S | H | N | R | L | E | A | L | P | . |
N | S | L | L | A | P | L | G | R | L | R | Y | L | S | L | R | N | N | S | L | R | T | F | T | P | Q | . |
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P | P | G | L | E | R | L | W | L | E | G | N | P | W | D | C | G | C | P | L | K | A | L | R | D | F | A | L | Q | N | P | S | A | V | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | L | V | D | C | G | R | R | G | L | T | W | A | S | L | P | T | A | F | P | . |
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V | D | T | T | E | L | V | L | T | G | N | N | L | T | A | L | P | P | G | L | L | D | A | L | P | A | L | R | T | A | H | L | G | A | N | P | W | R | C | D | C | R | L | V | P | L | R | A | W | L | A | G | R | P | E | R | A | P |
Template Known Secondary structure |   |
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| S | G | G | G |  |  |  |  |  |  |  |  | T | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
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30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
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560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | F | V | Q | A | I | C | E | G | D | D | C | Q | P | P | A | Y | T | Y | N | N | I | T | C | A | S | P | P | E | V | V | G | L | D | L | R | D | L | S | E | A | H | F | . |
A | P | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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Y | R | D | L | R | C | V | A | P | P | A | L | R | G | R | L | L | P | Y | L | A | E | D | E | L | R | A | A | C |
Template Known Secondary structure |   |
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| B | S | T | T | T | T | T |
| B | G | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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