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Job DescriptionALS______
Confidence100.00%DateThu Feb 9 13:17:35 GMT 2012
Rank10Aligned Residues585
% Identity19%Templatec3rgxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein brassinosteroid insensitive 1; PDBTitle: structural insight into brassinosteroid perception by bri1
Resolution2.47 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20......... 30.........40.........50.........60...... ...70... ......80...
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Query Sequence  ALLLLSWVALGPRSLEGAD. PGTPGEAEGPACPAACVCSYDDDADELSVFCSSRNLT. . . . RLPDGVP. . GGTQALWLDG
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Template Conservation 


  
        
 

      
 
 

 
  
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Template Sequence  QLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDD. . . . . . . . . KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN
Template Known Secondary structure  T
S
TTSSTT

SSS
GGGSTTTT.........
TT



TTT
TT


TT
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   38.40.........50.........60.........70.. .......80.........90.........100........
 
   84.....90.........100.........110..... ....120.........130......... 140.........150.........160
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Query Sequence  NNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEP. . QALLGLENLCHLHLERNQLRSLAL. GTFAHTPALASLGLSNNRLSR
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Template Conservation 
 
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Template Sequence  SHINGSVSG. FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG
Template Known Secondary structure  S




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TT



SSGGGGGGGGG
TT



SS

S


S



TT
S

SSB
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   109110....... ..120.........130.........140.........150.........160.........170.........180.......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQ
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Template Conservation                   
                                                              
Template Sequence  ANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAIST
Template Known Secondary structure  STT

SS



SSS

B
TT
TT



SS


S


B
TT

S



SS


S
TT
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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   241........250.........260.........270.........280....
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Query Sequence  LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLED. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                                                  
Template Sequence  CTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL
Template Known Secondary structure 
TT



SS

S





TT



SS


GGGGGGTTT



SS


GGGGG

S


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   268.270.........280.........290.........300.........310.........320.........330.........340.......
 
   285....290.........300.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TFPGLLGLRVLRLSHNA
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Template Conservation                                                                                
 
Template Sequence  SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG
Template Known Secondary structure 
SSS

TT
TT



SS


TTTTT
S

SS


TTTT
STT





SS
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   348.350.........360.........370.........380.........390.........400.........410.........420.......
 
   302.......310.........320.........330.........340.........350.........360.........370.........380.
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Query Sequence  IASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQV
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Template Conservation                                                                                  
Template Sequence  FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG
Template Known Secondary structure 
S


GGGGG
TT



SS


S


GGGGG
TT



SS


S


GGGGG
TT



SS


S


GG
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   428.430.........440.........450.........460.........470.........480.........490.........500.......
 
   382.......390.........400.........410.. .......420.........430.........440.........450......
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Query Sequence  FRGLGKLHSLHLEGSCLGRIRPHTFTGLSGL. . . . . RRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQG
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Template Conservation                                                                                  
Template Sequence  LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI
Template Known Secondary structure  GGG
TT



SS


S


GGGGG
TT



SS



GGGGG
TT



SSSB

GGGGTTSS
B
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   508.510.........520.........530.........540.........550.........560.........570.........580.......
 
   457..460.........470.........480.........490...... ...500.........510.........520...
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Query Sequence  LGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEA. . . . . . . . . LPNSLLAPLGRLRYLSLRNNSLRTFTP. . . .
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Template Conservation                          
          
 
                   
  
  



 
 
   

  
 
Template Sequence  AANFRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYSPTFDNNGSMMFLDMSYNMLSGYIPKEIG
Template Known Secondary structure 






S

SS

SS
SS

GGGGGGGGGT

S








SS
B




SS



GGGG
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   588.590.........600.........610.........620.........630.........640.........650.........660.......
 
   524.....530.........540... ......550.........560.........570.........580........ .590......
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Query Sequence  QPPGLERLWLEGNPWDCGCP. . . . . LKALRDFALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPE. . VVGLDLRD
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Template Conservation   
  
  
 

 
 
   

  
  
  
  



 
 


 

  
  
  
  
 

 
 


 

   
  
    
Template Sequence  SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK
Template Known Secondary structure 

TT



SSSB

GGGGG
TT
S

SS




GGGGG



S

SS


SSTTGGGS
GGG
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   676...680.........690.........700.........710.........720.........730.........740.........750.....
 
   597..600.. ...
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Query Sequence  LSEAHF. APC
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Template Sequence  FLNNPGLCGY
Template Known Secondary structure  G
S
TTST
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   756...760.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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