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Job DescriptionALS______
Confidence99.97%DateThu Feb 9 13:17:35 GMT 2012
Rank30Aligned Residues173
% Identity30%Templatec2xotA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:amphoterin-induced protein 1; PDBTitle: crystal structure of neuronal leucine rich repeat protein amigo-1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.. .......100.........110.......
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Query Sequence  PACPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPA. AFQNLSSLGFLNLQGGQLGSLEPQA
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Template Sequence  VSCPANCLCASNI. . . . . . LSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEA
Template Known Secondary structure  TT

TT
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TTSSSS

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   32.......40.... .....50.........60.........70.........80.........90.........100.....
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  LLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLR
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Template Sequence  FVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELI. KLPKLM
Template Known Secondary structure  TTT
TT



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TTTTTT
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TTTTTT
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S

GGGT.

TT

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   106...110.........120.........130.........140.........150.........160.........170........ .180....
 
   198.200.........210........
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Query Sequence  ELVLAGNRLAYLQPALFSGLA
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Template Sequence  LLDLSSNKLKKLPLTDLQKLP
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   189190.........200.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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