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Job DescriptionALS______
Confidence99.94%DateThu Feb 9 13:17:35 GMT 2012
Rank36Aligned Residues149
% Identity17%Templatec2ifgB_
PDB info PDB header:transferaseChain: B: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: structure of the extracellular segment of human trka in complex with2 nerve growth factor
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  CPAACVCSYDDDADELSVFCSSRNLTRLPDGVP. . GGTQALWLDG. NNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQA
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Template Sequence  CPDAC. CPHGSSG. . . . LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA
Template Known Secondary structure 

SSS.

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TTTTTS
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TTG
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   36...40 ....... ..50.........60.........70.........80.........90.........100.........110
 
   118.120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  LLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG
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Template Sequence  FHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMP
Template Known Secondary structure  GGS
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GGGTSS





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GGGTT
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GGG

B
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   111........120.........130.........140.........150.........160.........170.........180.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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