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Job Description | ALS______ | Confidence | 97.91% | Date | Thu Feb 9 13:17:35 GMT 2012 |
Rank | 82 | Aligned Residues | 101 |
% Identity | 15% | Template | c1fqvK_ |
PDB info |
PDB header:ligase | Chain: K: PDB Molecule:skp2; |
PDBTitle: insights into scf ubiquitin ligases from the structure of2 the skp1-skp2 complex
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Resolution | 2.80 Å |
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74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | G | T | Q | A | L | W | L | D | G | N | N | L | S | S | . |
V | P | P | A | A | F | Q | N | L | S | S | L | G | F | L | N | L | Q | G | . |
G | Q | L | G | S | L | E | P | Q | A | L | L | G | L | E | N | L | C | H | L | H | L | E | R | N | Q | L | R | S | L | A | L | G | T | F | A | H | T | . |
P | A | L | A | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | N | L | V | H | L | D | L | S | D | S | V | M | L | K | N | D | C | F | Q | E | F | F | Q | L | N | Y | L | Q | H | L | S | L | S | R | C | Y | D | I | I | P | E | T | L | L | E | L | G | E | I | P | T | L | K | T | L | Q | V | F | G | I | . |
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V | P | D | G | T | L | Q | L | L | K | E | A | L | P | H |
Template Known Secondary structure |   |
T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | |
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. | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . |
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151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | G | L | S | N | N | R | L | S | R | L | E | D | G | L | F | E | G | L | G | S | L | W | D | L | N | L | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | Q | I | N | C | S | H | F | T | T | I | A | R | P | T | I | G | N | K | K | N | Q | E | I | W | G | I | K |
Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
398 | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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