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Job DescriptionALS______
Confidence99.39%DateThu Feb 9 13:17:35 GMT 2012
Rank66Aligned Residues142
% Identity14%Templatec1otnA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:internalin b; PDBTitle: calcium-binding mutant of the internalin b lrr domain
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   457..460.........470.........480.........490.........500.........510.........520... ......530....
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Query Sequence  LGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTP. . QPPGLERLWLE
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Template Sequence  FAETIKDNLKKKSVTDAV. . TQNELNSIDQIIANNSDIKSVQG. . IQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLD
Template Known Secondary structure  TT
S
TTS..
T


TTS




TT..GGG
TT



SS




GGGTT
TT



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   53......60.........70 .........80.........90... ......100.........110.........120........
 
   535....540... ......550.........560.........
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Query Sequence  GNPWDCGCP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LKALRDFALQNPSAVPRFVQAICEGD
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Template Sequence  ENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLT
Template Known Secondary structure  SS



GGGGTT
TT



SS




GGGGG
TT



SS




GGGGG
TT
S

SS




GGGTT
T
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   129130.........140.........150.........160.........170.........180.........190.........200........
 
   570.........580...... ...590.........600...
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Query Sequence  DCQPPAYTYNNITCASP. PEVVGLDLRDLSEAHFA
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Template Sequence  KLQNLYLSKNHISDLRALAGLKNLDVLELFSQE. C
Template Known Secondary structure  T



SS




GGGTT






S

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   209210.........220.........230.........240. .
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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