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Job DescriptionALS______
Confidence99.60%DateThu Feb 9 13:17:35 GMT 2012
Rank61Aligned Residues252
% Identity19%Templated2astb2
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Cyclin A/CDK2-associated p19, Skp2
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90....... ..100.........110.........120.........130........ .140.........150...
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Query Sequence  QALWLDGNNLSSVPPAAFQNL. . SSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLA. LGTFAHTPALASLGL
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Template Sequence  QTLDLTGKNL. . . HPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPF. RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL
Template Known Secondary structure  S
TT
B
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TT
S
TT

S


S



B.



TT

TTB


S
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   2138.2140....... ..2150.........2160.........2170.........2180. ........2190.........2200.........2210...
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  SNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAI
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Template Sequence  EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
B

TT
TT
S
TT
BS


TT





TT.........................
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   2214.....2220.........2230.........2240.........2250.........2260........
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  KANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDL
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   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  HFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHL
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   394.....400.........410.........420.........430.........440.........450.........460........ .470..
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Query Sequence  EGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN. RLAE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKN
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S
TT



S
GGGS

TT
S
TT
TT

G
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   22692270.........2280.........2290.........2300.........2310.........2320.....
 
   473......480.........490. ........500.........510...... ...520.........530.........540
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Query Sequence  LPADALGPLQRAFWLDVSH. NRLEALPNSLLAPLGRLRYLSLRNN. SLRTFTPQPPGLERLWLEGNPWDC
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Template Sequence  DCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTT
Template Known Secondary structure  GGGGGGGG
TT


TT
TT

GGGGGGGGG
TT


TTSS
TT
STTSS


S

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   2326...2330.........2340.........2350.........2360.........2370.........2380.........2390.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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