 |
| Job Description | Q02885 | | Confidence | 3.68% | Date | Thu Jan 5 12:33:21 GMT 2012 |
| Rank | 62 | Aligned Residues | 35 |
| % Identity | 29% | Template | c2y35A_ |
| PDB info |
PDB header:hydrolase/dna | Chain: A: PDB Molecule:ld22664p; |
PDBTitle: crystal structure of xrn1-substrate complex
|
| Resolution | 3.20 Å |
|
|   |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | L | V | A | G | K | K | K | N | T | G | E | E | W | D | V | L | E | F | S | S | L | T | E | . |
. |
L | K | K | Y | R | K | S | H | P | E | K | M | A | F |
| Query Conservation |   |
  |
|
|
|   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|   |   | . | . |
|
|
|   |
|   |   |   |
|
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|
|
|
|
|   |   |   |   |
| . | . | . |
|
|
|   |   |
|
|   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|   |
| Template Sequence |   |
E | E | R | A | G | Y | C | F | R | T | N | N | Q | W | . |
. |
. |
Y | Y | S | S | L | A | V | D | L | M | R | N | Y | C | Q | R | Y | P | D | V | I | D | F |
| Template Known Secondary structure |   |
 |  |  | T | T | T |  |  |  | S | S | S |
|  | . | . | . |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|
|  | . | . | . |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
923 | . | . | . | . | . | . | 930 | . | . | . | . | . | . | |
|
|
. | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|