26/01/2012 22:10:28 : INFO  : Run start: Thu Jan 26 22:10:25 GMT 2012
26/01/2012 22:10:40 : INFO  : Initialised job
26/01/2012 22:10:44 : INFO  : Renaming log file 'phyre2_20120126_221024.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ffa27d84d17c2995/phyre_20120126_221024.log'
26/01/2012 22:10:47 : INFO  : Initialised job:
Sequence
>batch____
MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK
PGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGM
KGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGG
TLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLD
LKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILP
SSGERYLSTALFADLFTEKELQQ

26/01/2012 22:10:50 : INFO  : Checked sequence
26/01/2012 22:10:58 : INFO  : Finding homologues with PSI-BLAST
26/01/2012 22:11:01 : INFO  : PSI-BLAST 3 iterations
26/01/2012 22:12:59 : INFO  : PSI-BLAST 5 iterations
26/01/2012 22:14:59 : INFO  : Finished PSI-BLAST
26/01/2012 22:15:05 : INFO  : Running Buildali to generate a3m file
26/01/2012 22:28:52 : INFO  : Converting to HMM
26/01/2012 22:28:59 : INFO  : Calibrating HMM
26/01/2012 22:29:22 : INFO  : Searching HMM database
26/01/2012 22:35:27 : INFO  : Finished buildali
26/01/2012 22:35:31 : INFO  : Predicting secondary structure
26/01/2012 22:35:50 : INFO  : Predicted secondary structure (PSI-Pred)
26/01/2012 22:35:55 : INFO  : Predicting Disordered regions
26/01/2012 22:36:04 : INFO  : Predicted Disorder (Disopred)
26/01/2012 22:36:09 : INFO  : Running memsat_svm check
26/01/2012 22:36:27 : INFO  : Globular protein
26/01/2012 22:36:30 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ffa27d84d17c2995'
26/01/2012 22:36:34 : INFO  : Initialising fold library search
26/01/2012 22:36:42 : INFO  : Initialised search input
26/01/2012 22:36:48 : INFO  : Building Ensemble models
26/01/2012 22:36:55 : INFO  : Building hh.d1fcja_.model.1.pdb
26/01/2012 22:37:34 : INFO  : Building c3pc3A_.1.pdb
26/01/2012 22:38:11 : INFO  : Building d1jbqa_.2.pdb
26/01/2012 22:38:50 : INFO  : Building c1jbqD_.3.pdb
26/01/2012 22:39:28 : INFO  : Building d1z7wa1.4.pdb
26/01/2012 22:40:06 : INFO  : Building d1y7la1.5.pdb
26/01/2012 22:40:43 : INFO  : Building d1fcja_.6.pdb
26/01/2012 22:41:20 : INFO  : Building c2pqmA_.7.pdb
26/01/2012 22:41:56 : INFO  : Building c3dwgA_.8.pdb
26/01/2012 22:42:32 : INFO  : Building d1ve1a1.9.pdb
26/01/2012 22:43:11 : INFO  : Building d2bhsa1.10.pdb
26/01/2012 22:43:48 : INFO  : Building c2q3bA_.11.pdb
26/01/2012 22:44:25 : INFO  : Building d1o58a_.12.pdb
26/01/2012 22:44:57 : INFO  : Building d1wkva1.13.pdb
26/01/2012 22:45:30 : INFO  : Building c2eguA_.14.pdb
26/01/2012 22:46:02 : INFO  : Building c1tdjA_.15.pdb
26/01/2012 22:46:36 : INFO  : Building d1pwha_.16.pdb
26/01/2012 22:47:10 : INFO  : Building c3l6cA_.17.pdb
26/01/2012 22:47:45 : INFO  : Building c2d1fA_.18.pdb
26/01/2012 22:48:18 : INFO  : Building c3iauA_.19.pdb
26/01/2012 22:48:53 : INFO  : Building c1p5jA_.20.pdb
26/01/2012 22:50:03 : INFO  : Finished HH model building
26/01/2012 22:50:07 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
26/01/2012 22:51:28 : INFO  : html domain output complete ID 'ffa27d84d17c2995'
27/01/2012 00:15:13 : INFO  : Run end  : Fri Jan 27 00:15:10 GMT 2012
