31 c3h04A_ Probab=99.95   E-value=1.4e-26  Score=170.99  Aligned_columns=266  Identities=12%

Q ss_pred             EEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCC---CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
Q ss_conf             8999737998169999999677888988713999978576---6301357789999998898998852131037664222
Q batch____         5 KVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGG---GVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPR   81 (306)
Q Consensus         5 ~v~~~~~~~~~~~L~g~l~~P~~~~~~~~~P~vv~~HG~~---~~~~~~~~~~a~~La~~Gy~V~~~D~rG~G~S~~~~~   81 (306)
                      +|.|+.....|.+|..++|.|++   ..+.|+||++||+|   |++..+.... ..++++||+|+++|+||+|.|+..  
T Consensus         1 ~~~~~~~~~dg~~l~~~~~~~~~---~~~~~~ii~lHGgg~~~g~~~~~~~~~-~~~~~~g~~vi~~d~rg~~~~~~~--   74 (272)
T c3h04A_           1 EIKYKVITKDAFALPYTIIKAKN---QPTKGVIVYIHGGGLMFGKANDLSPQY-IDILTEHYDLIQLSYRLLPEVSLD--   74 (272)
T ss_dssp             CEEEEEECTTSCEEEEEEECCSS---SSCSEEEEEECCSTTTSCCTTCSCHHH-HHHHTTTEEEEEECCCCTTTSCHH--
T ss_pred             CEEEEEECCCCCEEEEEEEECCC---CCCCEEEEEECCCCCCCCCHHHHHHHH-HHHHHCCCEEEEECCCCCCCCCCC--
T ss_conf             90389862678788899980588---988638999758713478977979999-999968989999755554367764--


Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             23431678887665443210012455553067765313320357887630022331001345320001122233211233
Q batch____        82 QLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDA  161 (306)
Q Consensus        82 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~s~gg~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                              .....................+.++|+|+||.++..++...+..............................
T Consensus        75 --------~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (272)
T c3h04A_          75 --------CIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQ  146 (272)
T ss_dssp             --------HHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHHSCCSEEEEESCCSCSCSHHHHSCCHHHHHHHT
T ss_pred             --------CCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             --------310122445555431024684499957666799888886477530320254456544433221111011001


Q ss_pred             HHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf             21110012221100000111112344333322210111000000011000001222001222222233456657764126
Q batch____       162 LPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYL  241 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (306)
                      ....                    ........................................................
T Consensus       147 ~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (272)
T c3h04A_         147 SINE--------------------TMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKT  206 (272)
T ss_dssp             TSCH--------------------HHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTT
T ss_pred             HHHH--------------------HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf             1101--------------------11100124444333210123444332100112100000001222248935755422


Q ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             896599981889878999999999569986899988998020013778999999999999885
Q batch____       242 TQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEE  304 (306)
Q Consensus       242 ~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~l~~i~gagH~~~~~~p~~~~~~~~~i~~Fl~~  304 (306)
                      .+|+|+++|++|..+|.+.....+...++++++++||+||..+.+.++...+.++++.+||+.
T Consensus       207 ~~p~lii~g~~D~~~p~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~fL~~  269 (272)
T c3h04A_         207 LPPVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNA  269 (272)
T ss_dssp             CCCEEEEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             863000145568717899999999838996999988798422333872389999999999986