174 c3fakA_ Probab=99.77   E-value=7.1e-17  Score=115.47  Aligned_columns=245  Identities=15%

Q ss_pred             EEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCC---CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
Q ss_conf             999737998169999999677888988713999978576---63013577899999988989988521310376642222
Q batch____         6 VSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGG---GVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQ   82 (306)
Q Consensus         6 v~~~~~~~~~~~L~g~l~~P~~~~~~~~~P~vv~~HG~~---~~~~~~~~~~a~~La~~Gy~V~~~D~rG~G~S~~~~~~   82 (306)
                      +.+...++.++++  ++|+|++   .++.|+||++||++   ++.........+.+.+.||+|+.+|+|+..+.      
T Consensus        44 ~~~~~~~~~~~~~--~~~~P~~---~~~~P~iv~~HGGg~~~~~~~~~~~~~~~la~~~G~~V~~~~yr~~~~~------  112 (297)
T c3fakA_          44 IQVEQVTVAGCAA--EWVRAPG---CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEH------  112 (297)
T ss_dssp             CEEEEEEETTEEE--EEEECTT---CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTS------
T ss_pred             EEEEEEECCCEEE--EEEECCC---CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCC------
T ss_conf             1572565188059--9996688---9887089997698653212243689999999845929998277644445------


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             34316788876654432100124555530677653133203578876300223310013453200011222332112332
Q batch____        83 LENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDAL  162 (306)
Q Consensus        83 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~s~gg~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                        .......|......................+.+.++......................                    
T Consensus       113 --~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  170 (297)
T c3fakA_         113 --PFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIP--------------------  170 (297)
T ss_dssp             --CTTHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEE--------------------
T ss_pred             --CCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC--------------------
T ss_conf             --4744799999999730344458775255311322210347788752047532234411--------------------


Q ss_pred             HHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf             11100122211000001111123443333222101110000000110000012220012222222334566577641268
Q batch____       163 PYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYLT  242 (306)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (306)
                                             ..+......................................................
T Consensus       171 -----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (297)
T c3fakA_         171 -----------------------ISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGL  227 (297)
T ss_dssp             -----------------------ESCCCCTTCCCTHHHHTTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTC
T ss_pred             -----------------------CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             -----------------------035347654652456401346554214677641147764334460158101112478


Q ss_pred             CCEEEEECCCCCCCCHHHHHHHHH--CCCCCEEEEECCCCCCCCCCCH--HHHHHHHHHHHHHHHHHC
Q ss_conf             965999818898789999999995--6998689998899802001377--899999999999988519
Q batch____       243 QPTQIVAGSQAGSKWMSDDLYDRA--SSQDKRYHIVEGANHMDLYDGK--AYVAEAISVLAPFFEETL  306 (306)
Q Consensus       243 ~P~Lii~G~~D~~~~~~~~~~~~~--~~~~~~l~~i~gagH~~~~~~p--~~~~~~~~~i~~Fl~~~L  306 (306)
                      .|+|+++|++|..++.+..++.++  .+.++|++++||.+|......+  ++..++++++.+||+||+
T Consensus       228 ~p~l~~~g~~D~~~~~s~~~~~~L~~~G~~vel~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~~  295 (297)
T c3fakA_         228 PPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQW  295 (297)
T ss_dssp             CCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             51599976976230589999999997799679999888961021356689899999999999999873