46 c2cjpA_ Probab=99.94   E-value=1.2e-25  Score=165.70  Aligned_columns=287  Identities=14%

Q ss_pred             CCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
Q ss_conf             91158999737998169999999677888988713999978576630135778999999889899885213103766422
Q batch____         1 MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEP   80 (306)
Q Consensus         1 ~~~~~v~~~~~~~~~~~L~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~a~~La~~Gy~V~~~D~rG~G~S~~~~   80 (306)
                      |-+..|+.     .|++|+....        |..|+||++||++++...|... ++.|+++||+|+++|+||||.|+.+.
T Consensus         3 ~~~~~v~~-----~g~~l~y~~~--------G~gp~vlliHG~~~~~~~~~~~-~~~L~~~g~~vi~~D~~G~G~S~~~~   68 (320)
T c2cjpA_           3 IEHKMVAV-----NGLNMHLAEL--------GEGPTILFIHGFPELWYSWRHQ-MVYLAERGYRAVAPDLRGYGDTTGAP   68 (320)
T ss_dssp             CEEEEEEE-----TTEEEEEEEE--------CSSSEEEEECCTTCCGGGGHHH-HHHHHTTTCEEEEECCTTSTTCBCCC
T ss_pred             EEEEEEEE-----CCEEEEEEEE--------CCCCEEEEECCCCCCHHHHHHH-HHHHHHCCCEEEEECCCCCCCCCCCC
T ss_conf             08999997-----9979999992--------5887799988689988889999-99999789899996776898997766


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCC------
Q ss_conf             223431678887665443210012455553067765313320357887630-0223310013453200011222------
Q batch____        81 RQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDR-RIKAIGTVSAVNIGSIFRNGWE------  153 (306)
Q Consensus        81 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~s~gg~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~------  153 (306)
                      ........ ..+....................++|+|+||.++...+...+ ....++...+............      
T Consensus        69 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vg~S~Gg~~a~~~a~~~~~~~~~lvl~~~~~~~~~~~~~~~~~~~~~  147 (320)
T c2cjpA_          69 LNDPSKFS-ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAI  147 (320)
T ss_dssp             TTCGGGGS-HHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHH
T ss_pred             CCCCCCCC-HHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf             66643222-79898877642100135878438997172469999999850002158998158777766431034442222


Q ss_pred             -----------------CCCCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCHHHHHH
Q ss_conf             -----------------332112332111001222110000011111234433332221011100000001100000122
Q batch____       154 -----------------NNVKSIDALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTA  216 (306)
Q Consensus       154 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (306)
                                       ...............................................................
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (320)
T c2cjpA_         148 YGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGF  227 (320)
T ss_dssp             HCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCS
T ss_pred             HCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCH
T ss_conf             01013455543101014542001245789998621123310000234443210000122111202357776654034452


Q ss_pred             HHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCC-------CCCEEEEECCCCCCCCCCCHH
Q ss_conf             2001222222233456657764126896599981889878999999999569-------986899988998020013778
Q batch____       217 PGYATLRSLNQIITYDAYHMAEVYLTQPTQIVAGSQAGSKWMSDDLYDRASS-------QDKRYHIVEGANHMDLYDGKA  289 (306)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~~~~~~~~~~~~~-------~~~~l~~i~gagH~~~~~~p~  289 (306)
                      ........................+++|+|+++|++|.+++...........       ++++++++||+||+.+.|+|+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~  307 (320)
T c2cjpA_         228 TGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPH  307 (320)
T ss_dssp             HHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHSHH
T ss_pred             HHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCHH
T ss_conf             45799887421023320000022589988999957887338899999998545666427981899978984586682789


Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             9999999999998851
Q batch____       290 YVAEAISVLAPFFEET  305 (306)
Q Consensus       290 ~~~~~~~~i~~Fl~~~  305 (306)
                      .+.+++   .+||+|.
T Consensus       308 ~v~~~i---~~fL~kf  320 (320)
T c2cjpA_         308 EISKHI---YDFIQKF  320 (320)
T ss_dssp             HHHHHH---HHHHTTC
T ss_pred             HHHHHH---HHHHHCC
T ss_conf             999999---9988509