Phyre 2 alignment of P0A9D8 with c3iz5a_

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Job Description | P0A9D8
Confidence | 2.34% | Date | Thu Jan 5 11:09:57 GMT 2012
Rank | 73 | Aligned Residues | 22
% Identity | 32% | Template | c3iz5a_
PDB info | PDB header:ribosome | Chain: A: PDB Molecule:60s ribosomal protein l1 (l1p); | PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution | 5.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | .
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Query Sequence |  | D | G | K | Y | S | L | Y | C | A | V | I | V | K | K | V | D | A | K | T | R | G | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | Q | G | R | F | A | G | R | K | A | V | I | V | R | V | F | E | E | G | T | R | D | R
Template Known Secondary structure |  |  | S | S | S | S |  |  |  |  | B |  | S |  |  | S | S | S | S | S |  | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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