33 c1in8A_ Probab=99.26   E-value=1.7e-09  Score=74.15  Aligned_columns=183  Identities=22%

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHCCC--------CEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf             67799985787937999999962489--------7799976988898899999997238718999606766367779999
Q batch____         7 LSRPVRLDHTVVRERLLAKLSGANNF--------RLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASYL   78 (901)
Q Consensus         7 ~~~P~~~~~~vgR~~~l~~L~~~~~~--------~~v~i~G~~GiGKT~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   78 (901)
                      |..|..-..|||++.+.+.|......        +-++++||+|+|||+|+..++......+..+...............
T Consensus         2 ~~rp~~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l~~~~~~i~~~~~~~~~~~~~~~   81 (298)
T c1in8A_           2 FLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAIL   81 (298)
T ss_dssp             TTSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHHHHHHHH
T ss_pred             CCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
T ss_conf             88899977812709999999999999863388888579986988988899999999709979999415533201245668


Q ss_pred             HHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             97544200012344442245666689899999999999727997899962834679874899999997126888499998
Q batch____        79 IAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVL  158 (901)
Q Consensus        79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~llvlDd~~~~~~~~~~~ll~~l~~~~~~~~~ii~t  158 (901)
                                                            .....+-++++|+++.++......++..+-........+++.
T Consensus        82 --------------------------------------~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~~~~~~~~~~  123 (298)
T c1in8A_          82 --------------------------------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQPFTLV  123 (298)
T ss_dssp             --------------------------------------HTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSCCCCCCCEEE
T ss_pred             --------------------------------------HHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf             --------------------------------------851379989994236769899999999970553344406652


Q ss_pred             ECCCCCCCCHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHH---CCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             37886756113320124432651212799899999999640---789998999999998278348999999997
Q batch____       159 SRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRL---SSPIEAAESSRICDDVSGWATALQLIALSA  229 (901)
Q Consensus       159 sR~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~ll~~~~---g~~~~~~~~~~l~~~~~G~Pl~l~~~~~~l  229 (901)
                      ........................  +.+..+....+...+   +...+......++..++|+|--+..++...
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~R~~~~ll~~~  195 (298)
T c1in8A_         124 GATVRSGLLSSPLRSRFGIILELD--FYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRV  195 (298)
T ss_dssp             EEESCGGGSCHHHHTTCSEEEECC--CCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred             CCCCCHHHCCCHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             654585631464332344311367--898999999999999982985588999999998399989999999999