BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (1300 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P43329 ATP-dependent RNA helicase hrpA n=101 Tax=Bacter... 2671 0.0 UniRef50_B7VPK9 ATP-dependent helicase n=201 Tax=Bacteria RepID=... 1916 0.0 UniRef50_P45018 ATP-dependent RNA helicase hrpA homolog n=53 Tax... 1859 0.0 UniRef50_Q65SL6 HrpA protein n=9 Tax=Pasteurellaceae RepID=Q65SL... 1827 0.0 UniRef50_Q47MH0 ATP-dependent helicase HrpA n=13 Tax=Bacteria Re... 1628 0.0 UniRef50_A4X5M6 ATP-dependent helicase HrpA n=6 Tax=Actinomyceta... 1621 0.0 UniRef50_B5GG28 ATP-dependent helicase n=3 Tax=Streptomyces RepI... 1597 0.0 UniRef50_Q482P9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1473 0.0 UniRef50_D1VDH3 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. ... 1469 0.0 UniRef50_Q0S1M3 ATP-dependent helicase hrpA n=5 Tax=Corynebacter... 1406 0.0 UniRef50_A9WQ04 ATP-dependent helicase n=1 Tax=Renibacterium sal... 1367 0.0 UniRef50_D2S4R8 ATP-dependent helicase HrpA n=1 Tax=Geodermatoph... 1331 0.0 UniRef50_B0RGP0 ATP-dependent helicase n=3 Tax=Actinobacteria (c... 1320 0.0 UniRef50_Q3JBJ6 ATP-dependent helicase HrpA n=3 Tax=Chromatiacea... 1282 0.0 UniRef50_B2GLW1 ATP-dependent RNA helicase HrpA n=7 Tax=Bacteria... 1258 0.0 UniRef50_D2NU22 HrpA-like helicase n=4 Tax=Bacteria RepID=D2NU22... 1241 0.0 UniRef50_C8X757 ATP-dependent helicase HrpA n=1 Tax=Nakamurella ... 1240 0.0 UniRef50_A1U107 ATP-dependent helicase HrpA n=4 Tax=Gammaproteob... 1239 0.0 UniRef50_Q1N0P2 ATP-dependent helicase HrpA n=1 Tax=Bermanella m... 1228 0.0 UniRef50_A6WCM9 ATP-dependent helicase HrpA n=5 Tax=Bacteria Rep... 1227 0.0 UniRef50_Q21LQ8 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1227 0.0 UniRef50_Q1QXI6 ATP-dependent helicase HrpA n=17 Tax=Gammaproteo... 1220 0.0 UniRef50_C7NIQ1 ATP-dependent helicase HrpA n=1 Tax=Kytococcus s... 1217 0.0 UniRef50_C5CA12 ATP-dependent helicase HrpA n=5 Tax=Micrococcace... 1202 0.0 UniRef50_C8NU49 ATP-dependent helicase HrpA n=8 Tax=Corynebacter... 1201 0.0 UniRef50_A8L7U0 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. ... 1198 0.0 UniRef50_D1BIN2 ATP-dependent helicase HrpA n=1 Tax=Sanguibacter... 1192 0.0 UniRef50_C7ME24 ATP-dependent helicase HrpA n=1 Tax=Brachybacter... 1187 0.0 UniRef50_Q0F3B4 ATP-dependent helicase HrpA n=1 Tax=Mariprofundu... 1182 0.0 UniRef50_C0VVM1 HrpA family ATP-dependent helicase n=2 Tax=Coryn... 1177 0.0 UniRef50_D0LBQ9 ATP-dependent helicase HrpA n=2 Tax=Corynebacter... 1171 0.0 UniRef50_A6VYA9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1160 0.0 UniRef50_B9Z2A4 ATP-dependent helicase HrpA n=1 Tax=Lutiella nit... 1160 0.0 UniRef50_Q0A864 ATP-dependent helicase HrpA n=9 Tax=Gammaproteob... 1151 0.0 UniRef50_C5BR02 ATP-dependent helicase HrpA n=1 Tax=Teredinibact... 1150 0.0 UniRef50_C8RTL0 ATP-dependent helicase n=4 Tax=cellular organism... 1148 0.0 UniRef50_A4VNQ0 ATP-dependent helicase HrpA n=32 Tax=Proteobacte... 1144 0.0 UniRef50_C4LJ32 Putative ATP-dependent helicase n=1 Tax=Coryneba... 1135 0.0 UniRef50_B5JXZ9 ATP-dependent helicase HrpA n=1 Tax=gamma proteo... 1134 0.0 UniRef50_C1DAE5 HrpA n=2 Tax=Betaproteobacteria RepID=C1DAE5_LARHH 1133 0.0 UniRef50_Q1YSZ9 ATP-dependent helicase HrpA n=2 Tax=unclassified... 1123 0.0 UniRef50_A3YEF6 ATP-dependent helicase HrpA n=1 Tax=Marinomonas ... 1122 0.0 UniRef50_B2U9W9 ATP-dependent helicase HrpA n=11 Tax=Betaproteob... 1113 0.0 UniRef50_A4BTJ3 ATP-dependent helicase HrpA n=1 Tax=Nitrococcus ... 1098 0.0 UniRef50_B9ZMZ4 ATP-dependent helicase HrpA n=1 Tax=Thioalkalivi... 1090 0.0 UniRef50_D0WKL4 ATP-dependent helicase HrpA n=1 Tax=Actinomyces ... 1090 0.0 UniRef50_B2JJC7 ATP-dependent helicase HrpA n=89 Tax=cellular or... 1088 0.0 UniRef50_Q1C7D5 ATP-dependent helicase HrpA n=4 Tax=Bacteria Rep... 1082 0.0 UniRef50_C7QZ06 ATP-dependent helicase HrpA n=1 Tax=Jonesia deni... 1079 0.0 UniRef50_Q31H28 ATP-dependent helicase HrpA n=1 Tax=Thiomicrospi... 1066 0.0 UniRef50_Q2Y975 ATP-dependent helicase HrpA n=2 Tax=Proteobacter... 1064 0.0 UniRef50_Q3SHC5 ATP-dependent helicase HrpA n=3 Tax=Betaproteoba... 1062 0.0 UniRef50_Q47AH6 ATP-dependent helicase HrpA n=7 Tax=Betaproteoba... 1061 0.0 UniRef50_B8KHJ8 ATP-dependent helicase HrpA n=1 Tax=gamma proteo... 1055 0.0 UniRef50_A6C1G8 ATP-dependent helicase HrpA n=1 Tax=Planctomyces... 1048 0.0 UniRef50_C1RH11 ATP-dependent helicase HrpA (Fragment) n=1 Tax=C... 1047 0.0 UniRef50_D1BTV1 ATP-dependent helicase HrpA n=4 Tax=Bacteria Rep... 1043 0.0 UniRef50_A0Z814 Helicase, ATP-dependent n=3 Tax=unclassified Gam... 1034 0.0 UniRef50_C7RBD8 ATP-dependent helicase HrpA n=1 Tax=Kangiella ko... 1022 0.0 UniRef50_Q0VPC9 ATP-dependent helicase HrpA n=2 Tax=Alcanivorax ... 1017 0.0 UniRef50_A4SYB1 ATP-dependent helicase HrpA n=1 Tax=Polynucleoba... 1015 0.0 UniRef50_A9GK92 ATP-dependent helicase HrpA n=2 Tax=Myxococcales... 983 0.0 UniRef50_A0L8U8 ATP-dependent helicase HrpA n=1 Tax=Magnetococcu... 980 0.0 UniRef50_C1ZJL9 ATP-dependent helicase HrpA n=1 Tax=Planctomyces... 973 0.0 UniRef50_B0TXK9 HrpA-like helicase n=2 Tax=Francisella philomira... 973 0.0 UniRef50_A5EVC9 ATP-dependent helicase HrpA n=1 Tax=Dichelobacte... 971 0.0 UniRef50_C8N990 ATP-dependent helicase HrpA n=1 Tax=Cardiobacter... 968 0.0 UniRef50_D0KXD2 ATP-dependent helicase HrpA n=1 Tax=Halothiobaci... 955 0.0 UniRef50_B7GWG2 ATP-dependent helicase HrpA n=17 Tax=Acinetobact... 953 0.0 UniRef50_C0VY42 HrpA family ATP-dependent helicase n=1 Tax=Actin... 946 0.0 UniRef50_B6BTD8 ATP-dependent helicase HrpA n=2 Tax=Betaproteoba... 934 0.0 UniRef50_A5WE54 ATP-dependent helicase HrpA n=4 Tax=Moraxellacea... 931 0.0 UniRef50_D2R0M6 ATP-dependent helicase HrpA n=1 Tax=Pirellula st... 930 0.0 UniRef50_C4KC73 ATP-dependent helicase HrpA n=1 Tax=Thauera sp. ... 929 0.0 UniRef50_Q2LSZ0 ATP-dependent helicase n=1 Tax=Syntrophus acidit... 905 0.0 UniRef50_B8FCF5 ATP-dependent helicase HrpA n=1 Tax=Desulfatibac... 905 0.0 UniRef50_C2KSU4 HrpA family ATP-dependent helicase n=3 Tax=Mobil... 900 0.0 UniRef50_A0LMI5 ATP-dependent helicase HrpA n=1 Tax=Syntrophobac... 899 0.0 UniRef50_C0QAN7 HrpA n=1 Tax=Desulfobacterium autotrophicum HRM2... 891 0.0 UniRef50_D0W5V2 ATP-dependent helicase HrpA n=3 Tax=Neisseria Re... 890 0.0 UniRef50_C5BVQ3 ATP-dependent helicase HrpA n=3 Tax=Bacteria Rep... 889 0.0 UniRef50_Q1H207 ATP-dependent helicase HrpA n=3 Tax=Methylophila... 879 0.0 UniRef50_C8QXF3 ATP-dependent helicase HrpA n=1 Tax=Desulfurivib... 873 0.0 UniRef50_A3M3Z2 ATP-dependent helicase n=1 Tax=Acinetobacter bau... 871 0.0 UniRef50_Q7USX6 ATP-dependent helicase hrpA n=1 Tax=Rhodopirellu... 861 0.0 UniRef50_A8ZWI2 ATP-dependent helicase HrpA n=1 Tax=Desulfococcu... 858 0.0 UniRef50_Q1NTJ0 ATP-dependent helicase HrpA n=2 Tax=delta proteo... 832 0.0 UniRef50_Q12AX3 ATP-dependent helicase HrpA n=1 Tax=Polaromonas ... 826 0.0 UniRef50_B3DQA9 HrpA-like helicase n=21 Tax=Bifidobacteriaceae R... 812 0.0 UniRef50_Q6AL39 Related to ATP-dependent helicase HrpA n=1 Tax=D... 803 0.0 UniRef50_B2UQA6 ATP-dependent helicase HrpA n=1 Tax=Akkermansia ... 794 0.0 UniRef50_Q0RE57 ATP dependent RNA helicase n=10 Tax=Bacteria Rep... 770 0.0 UniRef50_D1N0X8 ATP-dependent helicase HrpA n=1 Tax=Victivallis ... 758 0.0 UniRef50_UPI000050FFFD ATP-dependent helicase n=1 Tax=Brevibacte... 729 0.0 UniRef50_C0W5B9 Putative uncharacterized protein (Fragment) n=1 ... 703 0.0 UniRef50_B1ZWH7 ATP-dependent helicase HrpA n=2 Tax=Opitutaceae ... 672 0.0 UniRef50_B5JKC1 ATP-dependent helicase HrpA n=5 Tax=Bacteria Rep... 669 0.0 UniRef50_A7NAU7 ATP-dependent helicase n=16 Tax=Francisella RepI... 627 e-178 UniRef50_Q6A8Y5 ATP-dependent helicase HrpA n=3 Tax=Propionibact... 623 e-176 UniRef50_B2SSX2 ATP-dependent helicase HrpA n=13 Tax=Xanthomonad... 617 e-174 UniRef50_D2UEZ1 Putative atp-dependent helicase protein n=1 Tax=... 617 e-174 UniRef50_A9C368 ATP-dependent helicase HrpA n=13 Tax=cellular or... 615 e-174 UniRef50_Q87DR2 ATP-dependent helicase n=8 Tax=Xylella fastidios... 576 e-162 UniRef50_B4CU07 Helicase-associated domain protein n=2 Tax=Verru... 572 e-161 UniRef50_C9RLX0 Helicase-associated domain protein n=1 Tax=Fibro... 559 e-157 UniRef50_UPI0001BCCC41 ATP-dependent helicase HrpA n=1 Tax=Aerom... 465 e-129 UniRef50_A2EVN8 Helicase, putative n=1 Tax=Trichomonas vaginalis... 430 e-118 UniRef50_C8PMN0 ATP-dependent RNA helicase HrpA n=1 Tax=Treponem... 426 e-117 UniRef50_C5KUX0 ATP-dependent RNA helicase DHX8, putative n=1 Ta... 419 e-115 UniRef50_B6ADS3 DHX8/prp22-type ATP-dependent RNA helicase, puta... 418 e-115 UniRef50_C4M6S9 Helicase, putative n=3 Tax=Entamoeba RepID=C4M6S... 418 e-115 UniRef50_Q14562 ATP-dependent RNA helicase DHX8 n=78 Tax=Eukaryo... 417 e-114 UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helic... 417 e-114 UniRef50_P53131 Pre-mRNA-splicing factor ATP-dependent RNA helic... 413 e-113 UniRef50_Q09530 Probable pre-mRNA-splicing factor ATP-dependent ... 408 e-112 UniRef50_Q6BRT9 DEHA2D13882p n=8 Tax=Saccharomycetales RepID=Q6B... 408 e-112 UniRef50_A0D4B2 Chromosome undetermined scaffold_37, whole genom... 407 e-111 UniRef50_B3L2J4 Atp-dependant rna helicase, putative n=1 Tax=Pla... 406 e-111 UniRef50_C4QEZ9 ATP-dependent RNA Helicase, putative n=21 Tax=Eu... 405 e-111 UniRef50_Q7PT33 AGAP007212-PA n=4 Tax=cellular organisms RepID=Q... 405 e-111 UniRef50_O22899 Probable pre-mRNA-splicing factor ATP-dependent ... 405 e-111 UniRef50_Q54MH3 Putative pre-mRNA-splicing factor ATP-dependent ... 405 e-111 UniRef50_B2S1H1 ATP-dependent protease La n=22 Tax=Borrelia RepI... 405 e-111 UniRef50_Q75EQ9 AAR020Wp n=2 Tax=Saccharomycetaceae RepID=Q75EQ9... 402 e-110 UniRef50_C5DJP0 KLTH0F17974p n=2 Tax=Saccharomycetaceae RepID=C5... 402 e-110 UniRef50_Q54NJ4 Putative pre-mRNA-splicing factor ATP-dependent ... 402 e-110 UniRef50_C0H5K5 Splicing factor, putative n=2 Tax=Plasmodium fal... 401 e-109 UniRef50_C0NP73 ATP-dependent RNA helicase DHX8 n=10 Tax=Dikarya... 400 e-109 UniRef50_C4JEY7 ATP-dependent RNA helicase DHX8 n=25 Tax=cellula... 400 e-109 UniRef50_Q5CYX6 Prp16p pre-mRNA splicing factor. HrpA family SFI... 399 e-109 UniRef50_A7AWE8 RNA helicase, putative n=2 Tax=Piroplasmida RepI... 398 e-109 UniRef50_C0SAG2 Pre-mRNA-splicing factor ATP-dependent RNA helic... 398 e-109 UniRef50_Q759P9 ADR224Wp n=2 Tax=Saccharomycetaceae RepID=Q759P9... 398 e-109 UniRef50_O60231 Putative pre-mRNA-splicing factor ATP-dependent ... 396 e-108 UniRef50_B0JZ95 Dhx16 protein n=5 Tax=Fungi/Metazoa group RepID=... 395 e-108 UniRef50_A2EN72 Helicase, putative n=1 Tax=Trichomonas vaginalis... 393 e-107 UniRef50_Q03319 Probable ATP-dependent RNA helicase prh1 n=2 Tax... 393 e-107 UniRef50_A7ASE9 RNA helicase, putative n=1 Tax=Babesia bovis Rep... 393 e-107 UniRef50_Q10752 Pre-mRNA-splicing factor ATP-dependent RNA helic... 392 e-107 UniRef50_C4QXH4 DEAH-box RNA-dependent ATPase/ATP-dependent RNA ... 390 e-106 UniRef50_B0ECA9 Pre-mRNA-splicing factor ATP-dependent RNA helic... 390 e-106 UniRef50_UPI000186CCEB ATP-dependent RNA helicase, putative n=1 ... 389 e-106 UniRef50_Q9H5Z1 Probable ATP-dependent RNA helicase DHX35 n=44 T... 388 e-106 UniRef50_C4QXR9 Putative uncharacterized protein n=1 Tax=Pichia ... 386 e-105 UniRef50_B6JZW3 ATP-dependent RNA helicase Prp16 n=1 Tax=Schizos... 386 e-105 UniRef50_A4S4Y0 Predicted protein n=3 Tax=Mamiellales RepID=A4S4... 385 e-105 UniRef50_B6AHK6 Pre-mRNA-splicing factor ATP-dependent RNA helic... 385 e-105 UniRef50_Q9P774 Pre-mRNA-splicing factor ATP-dependent RNA helic... 384 e-104 UniRef50_D1H6K3 Whole genome shotgun sequence of line PN40024, s... 382 e-104 UniRef50_A7AVM7 DEAH box RNA helicase, putative n=3 Tax=Piroplas... 382 e-104 UniRef50_B2ANS3 Predicted CDS Pa_6_9920 n=3 Tax=Saccharomyceta R... 382 e-104 UniRef50_C5X1W0 Putative uncharacterized protein Sb01g037170 n=2... 382 e-104 UniRef50_B9WE17 Pre-mRNA-splicing factor ATP-dependent RNA helic... 381 e-104 UniRef50_Q9H6R0 Putative ATP-dependent RNA helicase DHX33 n=37 T... 381 e-104 UniRef50_Q6P404 DEAH (Asp-Glu-Ala-His) box polypeptide 38 n=9 Ta... 381 e-104 UniRef50_A3FQE8 Putative uncharacterized protein n=2 Tax=Cryptos... 381 e-104 UniRef50_Q5ANN5 Likely spliceosomal DEAD box ATPase n=3 Tax=Euka... 381 e-103 UniRef50_B2S3B9 ATP-dependent helicase n=3 Tax=Treponema RepID=B... 379 e-103 UniRef50_Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helic... 379 e-103 UniRef50_Q6FTI2 Strain CBS138 chromosome G complete sequence n=1... 378 e-102 UniRef50_O45244 Probable pre-mRNA-splicing factor ATP-dependent ... 377 e-102 UniRef50_Q4Q2X4 ATP-dependent RNA helicase-like protein n=3 Tax=... 376 e-102 UniRef50_A9US44 Predicted protein n=1 Tax=Monosiga brevicollis R... 376 e-102 UniRef50_D2JWV9 Putative pre-mRNA splicing factor n=1 Tax=Filoba... 374 e-101 UniRef50_Q7XIR8 Os07g0508000 protein n=4 Tax=Embryophyta RepID=Q... 374 e-101 UniRef50_B6AI28 Pre-mRNA-processing protein 8, putative n=1 Tax=... 373 e-101 UniRef50_A8IHD9 DEAH-box nuclear pre-mRNA splicing factor n=2 Ta... 373 e-101 UniRef50_Q9VR29 CG3225 n=19 Tax=Neoptera RepID=Q9VR29_DROME 373 e-101 UniRef50_Q5KGT3 Pre-mRNA splicing factor, putative n=7 Tax=Dikar... 373 e-101 UniRef50_C4Y9K0 Putative uncharacterized protein n=1 Tax=Clavisp... 373 e-101 UniRef50_B9H2M0 Predicted protein n=9 Tax=Embryophyta RepID=B9H2... 372 e-101 UniRef50_Q55CD3 DEAD/DEAH box helicase n=2 Tax=Eukaryota RepID=Q... 372 e-101 UniRef50_C4LWD6 Helicase, putative n=10 Tax=Eukaryota RepID=C4LW... 372 e-101 UniRef50_C9ZMN0 ATP-dependent RNA helicase, putative n=4 Tax=Try... 372 e-101 UniRef50_A7E6W3 Putative uncharacterized protein n=1 Tax=Sclerot... 371 e-101 UniRef50_A5E397 Putative uncharacterized protein n=1 Tax=Loddero... 369 e-100 UniRef50_B4JQ72 GH13648 n=1 Tax=Drosophila grimshawi RepID=B4JQ7... 368 e-100 UniRef50_Q0UY60 Putative uncharacterized protein n=1 Tax=Phaeosp... 368 1e-99 UniRef50_D0MZQ2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 367 2e-99 UniRef50_Q9VL25 CG4901 n=10 Tax=Drosophila RepID=Q9VL25_DROME 366 4e-99 UniRef50_Q4N829 RNA helicase, putative n=2 Tax=Theileria RepID=Q... 363 3e-98 UniRef50_Q9BKQ8 Probable ATP-dependent RNA helicase DHX35 homolo... 363 3e-98 UniRef50_P15938 Pre-mRNA-splicing factor ATP-dependent RNA helic... 362 4e-98 UniRef50_A5AMC2 Putative uncharacterized protein n=2 Tax=Eukaryo... 362 7e-98 UniRef50_C5LYU2 ATP-dependent RNA helicase DHX8, putative n=1 Ta... 358 5e-97 UniRef50_Q38AN5 Pre-mRNA splicing factor ATP-dependent RNA helic... 358 6e-97 UniRef50_B6H7B9 Pc16g02360 protein n=34 Tax=Leotiomyceta RepID=B... 357 1e-96 UniRef50_B9WL64 Pre-mRNA-splicing factor ATP-dependent RNA helic... 357 2e-96 UniRef50_D1ZEJ8 Whole genome shotgun sequence assembly, scaffold... 357 2e-96 UniRef50_UPI0001925C54 PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 356 3e-96 UniRef50_A4RR62 Predicted protein n=3 Tax=Mamiellales RepID=A4RR... 355 5e-96 UniRef50_Q9DBV3 Probable ATP-dependent RNA helicase DHX34 n=23 T... 355 6e-96 UniRef50_A5DRX8 Putative uncharacterized protein n=1 Tax=Loddero... 354 1e-95 UniRef50_Q5KMH9 Pre-mRNA splicing factor, putative n=4 Tax=Fungi... 352 5e-95 UniRef50_Q6CF95 YALI0B09053p n=1 Tax=Yarrowia lipolytica RepID=Q... 350 3e-94 UniRef50_Q3LVV7 Putative pre-mRNA splicing factor n=1 Tax=Bigelo... 349 4e-94 UniRef50_C3YFD5 Putative uncharacterized protein n=1 Tax=Branchi... 349 4e-94 UniRef50_O01598 Putative uncharacterized protein T05E8.3 n=1 Tax... 348 7e-94 UniRef50_B3SBV6 Putative uncharacterized protein n=2 Tax=Fungi/M... 348 8e-94 UniRef50_A5DZ49 Pre-mRNA splicing factor ATP-dependent RNA helic... 348 9e-94 UniRef50_A2D7A5 Helicase, putative n=1 Tax=Trichomonas vaginalis... 348 1e-93 UniRef50_D1IUD7 Whole genome shotgun sequence of line PN40024, s... 347 2e-93 UniRef50_Q8IX18 Probable ATP-dependent RNA helicase DHX40 n=31 T... 346 4e-93 UniRef50_Q8SQQ2 PRE-mRNA SPLICING FACTOR (DEAD box family) n=1 T... 345 6e-93 UniRef50_A2DQS5 Helicase, putative n=1 Tax=Trichomonas vaginalis... 345 1e-92 UniRef50_A8XFV1 Putative uncharacterized protein n=2 Tax=Caenorh... 344 1e-92 UniRef50_Q9FZC3 T1K7.25 protein n=12 Tax=Embryophyta RepID=Q9FZC... 343 2e-92 UniRef50_P20095 Pre-mRNA-splicing factor ATP-dependent RNA helic... 342 7e-92 UniRef50_UPI000186E82E ATP-dependent RNA helicase, putative n=1 ... 341 1e-91 UniRef50_UPI0001792F5D PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 340 2e-91 UniRef50_UPI0000E49F9A PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 340 3e-91 UniRef50_C4Y8X8 Putative uncharacterized protein n=1 Tax=Clavisp... 339 3e-91 UniRef50_Q22YX8 Putative uncharacterized protein n=1 Tax=Tetrahy... 339 5e-91 UniRef50_C5DCP1 KLTH0B04664p n=2 Tax=Saccharomycetales RepID=C5D... 339 5e-91 UniRef50_UPI0000DB6CD8 PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 338 7e-91 UniRef50_Q2GVT0 Putative uncharacterized protein n=2 Tax=Sordari... 337 1e-90 UniRef50_A4RXZ6 Predicted protein n=7 Tax=Eukaryota RepID=A4RXZ6... 336 3e-90 UniRef50_D0NMK0 Pre-mRNA-splicing factor ATP-dependent RNA helic... 336 4e-90 UniRef50_C4GIA8 Putative uncharacterized protein n=1 Tax=Kingell... 336 4e-90 UniRef50_D0A429 Pre-mRNA splicing factor ATP-dependent RNA helic... 335 6e-90 UniRef50_Q4E099 ATP-dependent DEAD/H RNA helicase, putative n=5 ... 334 2e-89 UniRef50_A5DQ95 Putative uncharacterized protein n=2 Tax=Pichia ... 333 2e-89 UniRef50_A2DDS9 Helicase, putative n=2 Tax=Trichomonas vaginalis... 333 2e-89 UniRef50_A8PRC9 DEAH, putative n=1 Tax=Brugia malayi RepID=A8PRC... 333 3e-89 UniRef50_A9M0L0 ATP-dependent RNA helicase HrpA n=20 Tax=Neisser... 333 3e-89 UniRef50_Q3LWK1 mRNA splicing factor PRP22 n=1 Tax=Bigelowiella ... 333 3e-89 UniRef50_Q22ZC0 Putative uncharacterized protein n=1 Tax=Tetrahy... 333 4e-89 UniRef50_P36009 Probable ATP-dependent RNA helicase DHR2 n=16 Ta... 332 5e-89 UniRef50_A2F2U1 Putative uncharacterized protein n=2 Tax=Trichom... 332 7e-89 UniRef50_C0DXW8 Putative uncharacterized protein n=2 Tax=Neisser... 330 2e-88 UniRef50_B8C4C7 Atp-dependent RNA helicase n=1 Tax=Thalassiosira... 330 2e-88 UniRef50_D2A664 Putative uncharacterized protein GLEAN_15049 n=1... 328 7e-88 UniRef50_C1E1Z9 Predicted protein n=2 Tax=Micromonas RepID=C1E1Z... 328 9e-88 UniRef50_Q16ZW5 ATP-dependent RNA helicase n=11 Tax=Eukaryota Re... 328 1e-87 UniRef50_B5RU49 DEHA2E21340p n=4 Tax=Saccharomycetales RepID=B5R... 327 1e-87 UniRef50_Q9HE06 Putative pre-mRNA-splicing factor ATP-dependent ... 327 1e-87 UniRef50_UPI0001924504 PREDICTED: similar to Probable ATP-depend... 326 4e-87 UniRef50_Q4QAM3 Pre-mRNA splicing factor, putative n=6 Tax=Trypa... 325 5e-87 UniRef50_B0CX49 Predicted protein n=2 Tax=Agaricales RepID=B0CX4... 325 7e-87 UniRef50_A4ICP7 DEAH-box RNA helicase, putative n=4 Tax=Trypanos... 325 8e-87 UniRef50_Q4UH89 ATP-dependent helicase, putative n=2 Tax=Theiler... 324 1e-86 UniRef50_B0ECZ2 ATP-dependent RNA helicase, putative n=2 Tax=Ent... 323 3e-86 UniRef50_A7AU05 Helicase associated domain containing protein n=... 323 4e-86 UniRef50_B6KSU8 Pre-mRNA splicing factor RNA helicase, putative ... 320 2e-85 UniRef50_Q759Y3 ADR140Cp n=2 Tax=Saccharomycetaceae RepID=Q759Y3... 319 5e-85 UniRef50_A0E003 Chromosome undetermined scaffold_70, whole genom... 318 7e-85 UniRef50_Q8SQW7 Possible PRE-mRNA SPLICING FACTOR (ATP-DEPENDENT... 318 1e-84 UniRef50_B1ZU70 Helicase ATP-dependent domain protein n=5 Tax=Ve... 317 3e-84 UniRef50_Q55EC3 DEAD/DEAH box helicase n=1 Tax=Dictyostelium dis... 315 8e-84 UniRef50_Q4PCT7 Putative uncharacterized protein n=1 Tax=Ustilag... 315 8e-84 >UniRef50_P43329 ATP-dependent RNA helicase hrpA n=101 Tax=Bacteria RepID=HRPA_ECOLI Length = 1300 Score = 2671 bits (6924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1300/1300 (100%), Positives = 1300/1300 (100%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK Sbjct: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG Sbjct: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA Sbjct: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH Sbjct: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE Sbjct: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI Sbjct: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR Sbjct: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ Sbjct: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA Sbjct: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ Sbjct: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL Sbjct: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE Sbjct: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE Sbjct: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA Sbjct: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR Sbjct: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW Sbjct: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW Sbjct: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 Query: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS Sbjct: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 Query: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK Sbjct: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG Sbjct: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED Sbjct: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG Sbjct: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 >UniRef50_B7VPK9 ATP-dependent helicase n=201 Tax=Bacteria RepID=B7VPK9_VIBSL Length = 1355 Score = 1916 bits (4964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 902/1304 (69%), Positives = 1092/1304 (83%), Gaps = 9/1304 (0%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 T+ + + +L++ L M+RDR R S+R+ G K+KN ++ A+F E+A +I ++ Sbjct: 50 TKSSQNSPVSLRKALHECMMRDRFRLSKRITGASKIKNEQSKHAVFDEIALDIAKSMMTA 109 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R A +P I YP+ LPVSQK+ DI +AI ++QVVIVAGETGSGKTTQLPKIC ELGRG Sbjct: 110 TQRAAQKPTIEYPEILPVSQKRDDIAKAIAENQVVIVAGETGSGKTTQLPKICSELGRGR 169 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 GLIGHTQPRRLAAR+VANRIAEE++T+ G +GYKVRF+D +S+NT +KLMTDGILLAE Sbjct: 170 FGLIGHTQPRRLAARSVANRIAEEMETQLGEFVGYKVRFNDQISENTQIKLMTDGILLAE 229 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQ DR L QYDTIIIDEAHERSLNIDF++GYL+ELLP+RPDLK+IITSATIDPERFS+HF Sbjct: 230 IQHDRFLSQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHF 289 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGER 301 NNAPIIEVSGRTYPV+ RYRP+ + D++RDQ++ IF+AVDEL E GDILIFM+GER Sbjct: 290 NNAPIIEVSGRTYPVDTRYRPLGGDDSDSDRDQIEGIFEAVDELCDEGQGDILIFMNGER 349 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 EIRDTAD+L+K NLR TEI+PLYARLS EQNR+FQSH+GRRIVLATNVAETSLTVPGIK Sbjct: 350 EIRDTADSLSKRNLRDTEIVPLYARLSAGEQNRIFQSHTGRRIVLATNVAETSLTVPGIK 409 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVIDPGTARISRYSYRTKVQRLPIEP+SQASANQRKGRCGRV+EGICIRLYSE+DF SRP Sbjct: 410 YVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVAEGICIRLYSEEDFESRP 469 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 EFTDPEILRTNLASVILQMTALGLGDI AFPFVEAPDKRNIQDGVRLLEELGAI E + Sbjct: 470 EFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDKRNIQDGVRLLEELGAIAIVEPS 529 Query: 482 S---------AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 + KLT +GR+L++LP+DPRLARMV+EA + C+ E M+I SALSIQDPRE Sbjct: 530 ANKNKNHGDDKKKLTAIGRKLAKLPIDPRLARMVIEAPSNRCLHEVMVIASALSIQDPRE 589 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP DKQQ+SD+KH+RF DKESDF+ FVNLW+Y+ +QQKALSSN FR+ C+ DYLNYLR+R Sbjct: 590 RPSDKQQSSDDKHKRFFDKESDFITFVNLWDYVKQQQKALSSNQFRKQCKQDYLNYLRIR 649 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 EWQD+Y Q+ Q ++EL +N+EP Y IH++LL+GLLSHIGMKD +K EY GARNARF Sbjct: 650 EWQDVYFQIHQAMRELDTKLNTEPGSYDGIHMSLLSGLLSHIGMKDQEKNEYQGARNARF 709 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 IFP SGLFKK PKW+M AELVETS+LWGR+ A+I PEW+EP+A+HLIKR+YSEPHW + Sbjct: 710 HIFPASGLFKKQPKWIMSAELVETSKLWGRVIAKIQPEWIEPLAKHLIKRSYSEPHWSKK 769 Query: 713 QGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKL 772 Q AVMA EKV +YG+PI+ R VNY ID + RELF+R ALVEG+W+T+HAFF++N KL Sbjct: 770 QAAVMAHEKVMLYGIPIIPKRLVNYGAIDATVSRELFVRSALVEGEWETKHAFFKQNRKL 829 Query: 773 RAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEK 832 EVEELEHKSRRRDIL+DD+ LF+FYDQR+ + +S RHFD+WWKK S++TP+LLNFEK Sbjct: 830 LQEVEELEHKSRRRDILIDDDELFDFYDQRVGEEAVSGRHFDTWWKKTSQKTPELLNFEK 889 Query: 833 SMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFE 892 SML + A ++ LDYPNFWHQ +KL+LSYQFEPG D DGVTVHIPLP+LNQ++++GF+ Sbjct: 890 SMLFRGDASHVTDLDYPNFWHQNGIKLKLSYQFEPGDDNDGVTVHIPLPILNQIDQNGFD 949 Query: 893 WQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG 952 WQIPGLR+ELVI+LIKSLPK +RRNFVPAPNYA+AFL RV PLE PLLDSLE+ELRRMTG Sbjct: 950 WQIPGLRQELVISLIKSLPKTLRRNFVPAPNYADAFLARVTPLEAPLLDSLEKELRRMTG 1009 Query: 953 VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI 1012 V V R+DW DQ+P+HLK+TFR VD + +KLKE + L +LK++LK KVQETLS VADD I Sbjct: 1010 VEVVRDDWKLDQIPEHLKVTFRAVDHRKRKLKEQKDLHELKESLKDKVQETLSKVADDDI 1069 Query: 1013 EQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRR 1072 EQ LH WSFG+LP+ Y+QKRG Y VKA+PALVD +DSV IKLF+ EQ AM +G RR Sbjct: 1070 EQQNLHTWSFGELPKVYQQKRGGYDVKAFPALVDTKDSVEIKLFETEQEQITAMKSGQRR 1129 Query: 1073 LLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEE 1132 L+LLN+PSPIKYLH LPNK+KLGLYFNPYG+VL+LIDDCI+CG+DKLI+ GG VW E Sbjct: 1130 LILLNVPSPIKYLHSNLPNKSKLGLYFNPYGQVLDLIDDCIACGIDKLIEQKGGIVWEPE 1189 Query: 1133 GFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGL 1192 F AL E VRAEL+DTVV+IA+QVE ILT F I+K+LKGRVD++MA LSDIKAQ+ GL Sbjct: 1190 QFEALKEHVRAELDDTVVEIAQQVETILTTAFAISKKLKGRVDLSMAFALSDIKAQIEGL 1249 Query: 1193 VYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLP 1252 +++GF T G+KRL D LRY++AIE+R+EKL +DP++DR M+KV++V +++ +NK+P Sbjct: 1250 IFKGFATECGWKRLPDILRYMKAIERRMEKLPIDPNKDRLHMIKVDSVMNDYKELLNKIP 1309 Query: 1253 PARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 E+VKE+RWMIEELRVS+FAQQLGTPYP+SDKR+ A++ Sbjct: 1310 KGIAVPENVKEVRWMIEELRVSFFAQQLGTPYPVSDKRVKNAID 1353 >UniRef50_P45018 ATP-dependent RNA helicase hrpA homolog n=53 Tax=Bacteria RepID=HRPA_HAEIN Length = 1304 Score = 1859 bits (4815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 907/1300 (69%), Positives = 1077/1300 (82%), Gaps = 11/1300 (0%) Query: 6 KLTFTALQQ----RLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 K T T LQQ +L+ +ML D+ R S R+HG+ K+K+ +AQQA+ E+ ++I+QA +V Sbjct: 7 KHTLTPLQQSLFSQLNDIMLVDQRRLSARIHGIGKIKSQEAQQAVAAEIQQQIEQARLRV 66 Query: 62 LLREAA-RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 R++A + I +P++LPVSQ+K +I + I +HQV++VAGETGSGKTTQLPK+C+ELG G Sbjct: 67 EQRKSAVQNPIVFPESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFG 126 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 G+IGHTQPRR+AAR+VA RIAEEL+TE GG +GYKVRF+D +SDNT +KLMTDGILLA Sbjct: 127 NLGMIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLA 186 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP-DLKIIITSATIDPERFSR 239 EIQ DR L QY +IIDEAHERSLN DF+LGYLK+LLPRR DLK+IITSATID ERFS+ Sbjct: 187 EIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSK 246 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSG 299 HFNNAPIIEVSGRTYPVEVRYRP+VEE D +DQLQ I +AVDEL E GDILIFM+G Sbjct: 247 HFNNAPIIEVSGRTYPVEVRYRPVVEEDD---QDQLQGILNAVDELQAEGRGDILIFMNG 303 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 EREIRDTA+AL K NL+HTEILPL+ARLS EQN++F RIVLATNVAETSLTVP Sbjct: 304 EREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTVPS 363 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE+DF S Sbjct: 364 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNS 423 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 RPEFTDPEILRTNLASVILQMTALGL DI AFPFV+APD+R+IQDGV+LLEELGA T + Sbjct: 424 RPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQ 483 Query: 480 QASAYK--LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 S K LT +GRQL+QLPVDPRLA+M+L A GCV E MII SALSIQDPRERP +K Sbjct: 484 TKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEK 543 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 QQASDEKHRRF DK+SDFLAF+NLW YL EQQK S N FRR C+ D+LNYLR+REWQDI Sbjct: 544 QQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREWQDI 603 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 Y Q+R V+E+ +P+NSE AEY++IH ALL+GLLSHIG+K+A+KQ+Y GARNA F+IFP Sbjct: 604 YHQIRLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPN 663 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVM 717 S LFKK PKWVM AELVETS+LWGR+ A I+PEW+EP+A+HLIK++YS P W +++GAV+ Sbjct: 664 SVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKSYSVPLWSKSRGAVI 723 Query: 718 ATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVE 777 A EKVT+YG+PIVA R VNY IDP + RE+FI+ ALVEG W T+H FF+EN +L EVE Sbjct: 724 ADEKVTLYGVPIVAVRPVNYGAIDPTVSREIFIQSALVEGGWNTKHKFFKENQRLVREVE 783 Query: 778 ELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK 837 ELEHKSRRRDILVDD TLFEFYDQRI +V+S +HFD+WWKK ++ P+LLNFE S LI Sbjct: 784 ELEHKSRRRDILVDDRTLFEFYDQRIGTEVVSQKHFDTWWKKAQQKDPELLNFEHSFLIN 843 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 + AE++SKLD+PNFWHQGNLKL+L+YQFEPG DADGVTVHIPLPLLNQVE +GF+WQIPG Sbjct: 844 DDAEQVSKLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQIPG 903 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDR 957 LR ELVIALIKSLPK RRNFVPAPNYA+AFL R PLE PLLD+L ELRRMTGVTV+ Sbjct: 904 LREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLIYELRRMTGVTVEA 963 Query: 958 EDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGL 1017 E W+W+Q+P HLK+TFRVVD+ KK+ E +L +LK LK +VQE++SAVADDGIEQSGL Sbjct: 964 EHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKFNLKDRVQESISAVADDGIEQSGL 1023 Query: 1018 HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLN 1077 HIWSF LP+ YEQK+ + VKA+PA+VDE+D+V IKLF+ EQ AM GLRRLLLLN Sbjct: 1024 HIWSFADLPQCYEQKQRGFSVKAFPAIVDEKDAVGIKLFETEFEQSVAMQQGLRRLLLLN 1083 Query: 1078 IPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 +PSPIKYLHEKLPNKAKLGLYF P+G+VL+LIDDCI+C VDKLI GG VW E GF L Sbjct: 1084 VPSPIKYLHEKLPNKAKLGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAGFEKL 1143 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 + VR LN+ VDIA++VEQILT + +N+RLKG++D TMA LSDIK+Q+ GLVY+GF Sbjct: 1144 RDFVRENLNEVTVDIAQKVEQILTLTYQLNQRLKGKMDFTMAFALSDIKSQLAGLVYQGF 1203 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 V +G+ RL D RYLQA++KR++KLA D +RDRA ML+VE VQQA+QQ + KLP ++ Sbjct: 1204 VQKSGYDRLPDLQRYLQAVDKRIDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSKPI 1263 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 ++V EIR+MIEELRVS FAQQLGT Y ISDKRI + Q Sbjct: 1264 SDEVAEIRYMIEELRVSLFAQQLGTKYQISDKRIGNIISQ 1303 >UniRef50_Q65SL6 HrpA protein n=9 Tax=Pasteurellaceae RepID=Q65SL6_MANSM Length = 1337 Score = 1827 bits (4733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 886/1333 (66%), Positives = 1069/1333 (80%), Gaps = 43/1333 (3%) Query: 6 KLTFTALQQRL----DSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 K F ALQ+ L + +M+ ++ R R+ G+ ++K +QQA ++ ++I QA ++ Sbjct: 8 KREFNALQKSLAEQIEDVMIVEQSRLLARIRGLGQIKKEQSQQAAALDIEQQIQQAKLRL 67 Query: 62 LLREAA-RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 LR++A + I +P+NLPVSQ+K +I + I +QVVIVAGETGSGKTTQLPK+C+ELG G Sbjct: 68 ELRKSAVKNPIVFPENLPVSQRKTEIQKLIAQNQVVIVAGETGSGKTTQLPKMCLELGFG 127 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 KGLIGHTQPRR+AAR+VA RIAEE++TE GG +GYKVRF+D + ++T +KLMTDGILLA Sbjct: 128 QKGLIGHTQPRRIAARSVAARIAEEMQTELGGIVGYKVRFNDQIGEDTQIKLMTDGILLA 187 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ DR L +YD +IIDEAHERSLN DF+LGYLK+LLPRRPDLK+IITSATID ERFS+H Sbjct: 188 EIQTDRFLNRYDCLIIDEAHERSLNNDFILGYLKQLLPRRPDLKVIITSATIDVERFSKH 247 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 FNNAPIIEVSGRTYPVEVRYRP+ A+ E+DQLQ I +AVDEL E GDILIF+SGE Sbjct: 248 FNNAPIIEVSGRTYPVEVRYRPV---AETEEQDQLQGILNAVDELQAEGRGDILIFLSGE 304 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIRDTA+AL K NLRHTEILPLYARLS EQN++F RIVLATNVAETSLTVPGI Sbjct: 305 REIRDTAEALEKQNLRHTEILPLYARLSAQEQNKIFHPGGLNRIVLATNVAETSLTVPGI 364 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG+CIRLYSE DF +R Sbjct: 365 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGVCIRLYSEQDFNNR 424 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 PEFTDPEILRTNLASVILQMTALGL DI AFPFV+APDKR+IQDG++LLEELGA + Sbjct: 425 PEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDKRHIQDGIKLLEELGAFEWQKS 484 Query: 481 A-SAYKLTP----------------------------------LGRQLSQLPVDPRLARM 505 SA+ +P GRQL+QLPVDPRLA+M Sbjct: 485 PPSAFGTSPRKRGEGNLASNSSLPPFTGGAGHSPEGGKRVLTQTGRQLAQLPVDPRLAKM 544 Query: 506 VLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL 565 +L A GCV E MII +ALSIQDPRERP +KQQ++D+KHRRF DK+SDFLAF+NLWNY+ Sbjct: 545 LLSAVDLGCVLEVMIIVAALSIQDPRERPQEKQQSADDKHRRFADKKSDFLAFLNLWNYI 604 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIA 625 EQQK LS N FRRLC+ DYLNYLRVREWQDIY Q+R V+E+G+P+NSEPA+Y +IH A Sbjct: 605 QEQQKVLSKNQFRRLCQKDYLNYLRVREWQDIYHQIRLTVREMGLPINSEPAQYPQIHSA 664 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 LL+GLLSHIGMK+A+KQ+Y GARNA F+IFP S LFKK PKWVM AELVETS+LWGR+ A Sbjct: 665 LLSGLLSHIGMKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMVA 724 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 IDPEWVEP+A+HLIK +YSEP W +++G V+A EKV++YG+PIVA+R VNY IDP Sbjct: 725 EIDPEWVEPLAKHLIKSSYSEPRWSKSRGQVIANEKVSLYGVPIVASRPVNYGAIDPQTS 784 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 RE+FI+ ALVEGDW TRH FF EN KL EVE+LEHKSRRRDILVDD TLFEFYD RI Sbjct: 785 REIFIQSALVEGDWHTRHKFFFENQKLIREVEDLEHKSRRRDILVDDRTLFEFYDSRIGA 844 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 DV+S +HFDSWWKK +++ P+LLNFEKS L+KE A+K+S+LD+PNFWHQGNLKL+L+YQF Sbjct: 845 DVVSQKHFDSWWKKAAQQDPELLNFEKSFLMKEDAQKVSQLDFPNFWHQGNLKLKLTYQF 904 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 EPG DADGVTVHIPLPLLNQ+E GF+WQIPGLR EL+++LIK+LPK +RRNFVPAPNYA Sbjct: 905 EPGTDADGVTVHIPLPLLNQIEMQGFDWQIPGLRHELIVSLIKALPKSLRRNFVPAPNYA 964 Query: 926 EAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 EAFL RV + PL ++L ELRRMTGV V+ E+W +Q+P HL++TFRV+D+K KK+ E Sbjct: 965 EAFLARVANFDKPLTETLSYELRRMTGVNVEVEEWKLEQIPPHLRMTFRVIDEKGKKIAE 1024 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 +L +LK LK +VQ+++SAVADDGIEQSG+HIW+F LP+ YEQK+ + VKA+PA+ Sbjct: 1025 SMNLDELKFGLKDQVQQSISAVADDGIEQSGIHIWNFDSLPQCYEQKKQGFTVKAFPAIT 1084 Query: 1046 DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV 1105 DE+++V IKLF+ EQ AM GLRRL+LLN+PSPIKYLHEKLPNK+KLGLYF P+GKV Sbjct: 1085 DEKEAVGIKLFETEYEQSVAMQQGLRRLILLNVPSPIKYLHEKLPNKSKLGLYFTPFGKV 1144 Query: 1106 LELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 L+LIDDCI+C VDKLI GG VW E F L + VR LN+ VDIA+QVE++LT F Sbjct: 1145 LDLIDDCIACAVDKLIADFGGFVWNERDFERLRDFVRENLNEITVDIAQQVERLLTLTFE 1204 Query: 1166 INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV 1225 INKRLKG++D TMA LSDIK+Q+ GL+Y GFV G+ RL D RYLQAI+KR++KLA Sbjct: 1205 INKRLKGKMDFTMAFALSDIKSQLAGLIYPGFVEKTGYARLPDIQRYLQAIDKRMDKLAQ 1264 Query: 1226 DPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYP 1285 D +RDRA ML+VE QQA+QQ + KLP ++ +V EIR+MIEELRVS FAQQLGT YP Sbjct: 1265 DINRDRAAMLRVEQCQQAYQQLLAKLPKSKPLSTEVLEIRYMIEELRVSLFAQQLGTKYP 1324 Query: 1286 ISDKRILQAMEQI 1298 +S+KR+L + +I Sbjct: 1325 VSEKRVLGVITEI 1337 >UniRef50_Q47MH0 ATP-dependent helicase HrpA n=13 Tax=Bacteria RepID=Q47MH0_THEFY Length = 1324 Score = 1628 bits (4216), Expect = 0.0, Method: Compositional matrix adjust. Identities = 808/1316 (61%), Positives = 1008/1316 (76%), Gaps = 19/1316 (1%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 T K F L++RL LM RDR R RR+ G +K+++PD ++A+ E++ +ID +V Sbjct: 3 TPSVKSPFADLRRRLPGLMPRDRHRLRRRIDGAEKIRDPDRRRAVAAEISADIDTCEARV 62 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R +A P I YP LPVSQKK +IL AIRDHQVVIVAGETGSGKTTQLPKIC+ELGRG+ Sbjct: 63 ERRRSAFPAIDYPAELPVSQKKDEILAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGV 122 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G IGHTQPRRLAARTVA RIAEEL T G +GYKVRF+D SD+T+VKLMTDGILLAE Sbjct: 123 LGQIGHTQPRRLAARTVAARIAEELGTTLGEWVGYKVRFTDVSSDDTLVKLMTDGILLAE 182 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQQDR+L YDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+IITSATIDPERFSRHF Sbjct: 183 IQQDRMLRAYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVIITSATIDPERFSRHF 242 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEE---------ADDTERDQLQAIFDAVDELSQESHGD 292 +NAPI+EVSGRTYPVEVRYRP+ E A +RDQ+Q I DAVDEL E GD Sbjct: 243 DNAPIVEVSGRTYPVEVRYRPLTAEQVVDDEDTVAATDDRDQIQGICDAVDELCAEGPGD 302 Query: 293 ILIFMSGEREIRDTADALNKLNLRH--------TEILPLYARLSNSEQNRVFQSHSGRRI 344 IL+F+SGEREIRDTA+AL K R EILPLYARLS +EQ RVFQ RRI Sbjct: 303 ILVFLSGEREIRDTAEALGKHLARRYPEGSPQAVEILPLYARLSAAEQQRVFQPRGKRRI 362 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VLATNVAETSLTVPGI+YV+DPGTARISRYS+RTKVQRLPIE ISQASANQRKGRCGRV+ Sbjct: 363 VLATNVAETSLTVPGIRYVVDPGTARISRYSHRTKVQRLPIERISQASANQRKGRCGRVA 422 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 EGICIRLYSE+DFLSRPEFT+PEILRTNLASVILQM ALGLGD+ FPFV+ PD+R ++D Sbjct: 423 EGICIRLYSEEDFLSRPEFTEPEILRTNLASVILQMAALGLGDVEEFPFVDGPDRRQVKD 482 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 GV LL ELGA+ + ++LT LGR L+QLP+DPRL RMV+EA ++GC+ E M+I +A Sbjct: 483 GVALLTELGALQPAKDGR-HRLTALGRTLAQLPIDPRLGRMVVEADRNGCLHEVMVIAAA 541 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LSIQDPRERP+++QQA+ +KH RF +SDFLA++NLWNYL E+Q+ LS N FR++CR + Sbjct: 542 LSIQDPRERPVEQQQAAAQKHARFAVPDSDFLAYLNLWNYLNERQQELSGNQFRKMCREE 601 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 +LNYLRVREWQDIY QLRQ+V+ LG+ VN+ PA+ + IH++LL GLLSHIG+KD +K EY Sbjct: 602 FLNYLRVREWQDIYAQLRQIVQSLGMKVNTAPADAKRIHLSLLAGLLSHIGLKDPEKHEY 661 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 GAR ARF+IFPGS LFKK P+WVM AELVETSRLW R+ ARI+PEWVE +A HL+KRTY Sbjct: 662 LGARGARFAIFPGSALFKKQPRWVMSAELVETSRLWARVNARIEPEWVEELAGHLVKRTY 721 Query: 705 SEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHA 764 SEPHWE+ +GAVMA E+VT+YG+PIV RKV+Y +IDP RELFIRHALV+G+W TRHA Sbjct: 722 SEPHWEKKRGAVMAYERVTLYGVPIVTQRKVDYGRIDPKTARELFIRHALVQGEWDTRHA 781 Query: 765 FFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRET 824 FFR N KL EVEELEH+ RRRDILVDD+ LF+FYDQR+ +V+S RHFDSWWK+V ++ Sbjct: 782 FFRRNQKLLQEVEELEHRVRRRDILVDDDVLFDFYDQRVGAEVVSVRHFDSWWKRVRQQQ 841 Query: 825 PDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLN 884 P LL+F+KSML+ E A + + YP+FW QG + RL+YQFEPG ADGVTVHIPL +LN Sbjct: 842 PRLLDFDKSMLVAEDAGEGIEEAYPDFWQQGEHRFRLTYQFEPGDAADGVTVHIPLNVLN 901 Query: 885 QVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLE 944 QV GF+WQIPGLR ELV+AL++SLPK +RR+FVP PNYA L R+KP PLL++L Sbjct: 902 QVSPEGFDWQIPGLREELVVALMRSLPKAIRRSFVPVPNYAADVLKRLKPYSEPLLEALS 961 Query: 945 RELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETL 1004 REL M G V +DW D+VPD+L++TFR VDDK + L E + L++L+ L+ ++++ + Sbjct: 962 RELTAMGGPRVTVDDWQLDRVPDYLRMTFRAVDDKGRTLAEAKDLEELRRRLQPRLRKAI 1021 Query: 1005 SAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQ 1064 SA A IE++GL W FG LP ++E++ + V+ +PALVDE +V +++FDN Q+Q Sbjct: 1022 SAEA-ASIERTGLTSWDFGPLPRTFERRTAGHIVRGYPALVDEGTTVGVRIFDNAAAQQQ 1080 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 AM G RRLL+L +PSP K+L L N+ L +P+G V L DDCI C VD L+ Sbjct: 1081 AMVAGTRRLLMLTVPSPAKFLRGHLSNQTTLVFSRSPHGSVAALFDDCIGCAVDSLVAEA 1140 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 GGPVW E FA L E VR L + V+++ VE+IL + K+LK + + ++D Sbjct: 1141 GGPVWDPESFAKLREHVRVNLVERVMELLPVVEKILATAQRVEKQLKSVTSLAVLPSITD 1200 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 I+ Q+G L+ GFVT G++RL D RYL+AIE RLE+L +P RD+ M K+E ++QA+ Sbjct: 1201 IQNQLGALIGPGFVTAAGYQRLRDLTRYLKAIEVRLERLPRNPRRDQVNMAKIEQLRQAY 1260 Query: 1245 QQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 QQ +++LPP + IRWM+EELR+SYFAQ++GT Y +S+KR+L+A+ ++ Sbjct: 1261 QQLLDRLPPGVPPGPAHENIRWMLEELRISYFAQEVGTAYSVSEKRVLKAISEVEA 1316 >UniRef50_A4X5M6 ATP-dependent helicase HrpA n=6 Tax=Actinomycetales RepID=A4X5M6_SALTO Length = 1339 Score = 1621 bits (4197), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/1320 (59%), Positives = 1002/1320 (75%), Gaps = 36/1320 (2%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI 71 L +RL LMLRD+ R RRL G +++ +P ++ E+ ++ +A ++ +R+AA P I Sbjct: 16 LHRRLRPLMLRDQHRLRRRLDGARRIPDPQRRETALAEITTDVVRAEARLAVRQAAVPAI 75 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 TYP LPVS ++ +I AIRDHQVVIVAGETGSGKTTQLPKIC+ELGRG+ GLIGHTQPR Sbjct: 76 TYPAMLPVSDRRDEIAAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVHGLIGHTQPR 135 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 RLAARTVA+RIAEEL TE G +GY+VRF+D VSD ++VKLMTDGILLAE+Q DR+L QY Sbjct: 136 RLAARTVADRIAEELGTELGEVVGYQVRFADQVSDRSLVKLMTDGILLAELQHDRMLRQY 195 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-----NNAPI 246 DTII+DEAHERSLNIDF+LGYL++LLPRR DLK+IITSATI+ +RF+RHF N AP+ Sbjct: 196 DTIIVDEAHERSLNIDFILGYLRQLLPRRRDLKVIITSATIETDRFARHFADADGNPAPV 255 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTE-------RDQLQAIFDAVDELSQESHGDILIFMSG 299 +EVSGRTYPVEVRYRP+VE +D + RDQ+QAI DAV EL+ E GDIL+F+SG Sbjct: 256 VEVSGRTYPVEVRYRPLVEVGEDEDDTDEEQVRDQVQAIGDAVQELATEGPGDILVFLSG 315 Query: 300 EREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS 354 EREIRDTADAL KL LR+TEILPLYARLS +EQ+RVF H+GRR+VLATNVAETS Sbjct: 316 EREIRDTADALGKLVAHRPTLRNTEILPLYARLSTAEQHRVFAPHTGRRVVLATNVAETS 375 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LTVPGI+YV+DPGTARISRYS R KVQRLPIEP+SQASANQR GRCGR S+GICIRLY E Sbjct: 376 LTVPGIRYVVDPGTARISRYSNRLKVQRLPIEPVSQASANQRTGRCGRTSDGICIRLYDE 435 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 DF SRPEFTDPEILRTNLASVILQMTA+GLGDIAAFPF++ PD+R I DGV LL ELGA Sbjct: 436 PDFQSRPEFTDPEILRTNLASVILQMTAIGLGDIAAFPFIDPPDRRTITDGVNLLHELGA 495 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + E A +LTPLGR+L+QLPVDPRLARMVLE +++GC E ++I +ALSIQDPRERP Sbjct: 496 LNPTETDPAKRLTPLGRRLAQLPVDPRLARMVLEGERNGCATEVVVIAAALSIQDPRERP 555 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 +DKQ +D+ H RF D+ESDF+A++NLW +L EQQ+A SS+ FRR+CR++YLNYLRVREW Sbjct: 556 VDKQAQADQAHARFADQESDFVAYLNLWRHLREQQRARSSSGFRRMCRSEYLNYLRVREW 615 Query: 595 QDIYTQLRQVVK------ELGIPVNS------------EPAEYREIHIALLTGLLSHIGM 636 QDI +QLRQ ++ G P E + ++H +LL GLLSH+G+ Sbjct: 616 QDIVSQLRQALRTPERSRRRGGPATDGGERRGGGADLPEEIDTPKVHQSLLAGLLSHVGL 675 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 KD + EY GAR A+F++FPGS L KKPP+WVM AELVET+RLWGR+ R++PEWVEP+A Sbjct: 676 KDTQRHEYLGARGAKFALFPGSALAKKPPRWVMAAELVETTRLWGRVNGRVEPEWVEPLA 735 Query: 697 QHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVE 756 QHL+KR+YSEPHWE+ Q AVMA EKVT+YG+PIV++RKVN+ +IDP + RELFIRHALVE Sbjct: 736 QHLVKRSYSEPHWEKRQAAVMAVEKVTLYGVPIVSSRKVNFGRIDPVVSRELFIRHALVE 795 Query: 757 GDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSW 816 GDWQT H F+R+N +L EV ELE++ RRRDILVDDET+F+FYD+R+ +V+S RHFD+W Sbjct: 796 GDWQTHHQFWRDNQQLLDEVTELENRVRRRDILVDDETIFQFYDERVPAEVVSGRHFDAW 855 Query: 817 WKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTV 876 WK+ R+ PDLL F + +L+ G + ++ YP+ W ++L L+Y+F+PG ADGVTV Sbjct: 856 WKRERRQRPDLLTFTRDLLVNAGRGGVDEVGYPDEWRADGVRLPLTYRFDPGTPADGVTV 915 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE 936 IPLPLLNQV F+WQ+PGLR ELVIALI+SLPK VRRNFVP P+YA A L + P E Sbjct: 916 DIPLPLLNQVPAESFQWQVPGLREELVIALIRSLPKAVRRNFVPVPDYARAVLAELPPGE 975 Query: 937 LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 LLD+L R+LRRMTGVTV R+ W ++P HL++TFRV+ + ++ + E + L L+ L Sbjct: 976 EDLLDALTRQLRRMTGVTVPRDAWDLGKLPPHLRVTFRVLGEDDRPVAESKDLPALQREL 1035 Query: 997 KGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 +V++ ++A A D + +SGL W G LP + EQ R Y V A+PALVDE +V +++F Sbjct: 1036 TAEVRQVVAAAAPD-VTRSGLTDWEIGALPRTVEQVRAGYAVTAYPALVDEGATVGVRVF 1094 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 D+P EQ+ A W G RRLL L PSP K+L +L N+AKL L NP+G V LI+D Sbjct: 1095 DSPAEQEAAHWAGTRRLLRLTAPSPAKFLQGRLSNEAKLALSRNPHGGVPALIEDAAGAA 1154 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 +DKLI GGP W +G+AAL VR L +TVV++ ++V +L A + I +RL ++ Sbjct: 1155 LDKLIADAGGPAWDADGYAALRSTVRTGLVETVVEVMERVRGVLAAGYAIEQRLGATRNL 1214 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 + L+D+++Q+ GL++ GF+T G+ RL D RYL AIE+RL++L +P RD+ Q + Sbjct: 1215 AVVAALADVRSQLTGLIHPGFITEAGYPRLPDLRRYLTAIERRLDRLPGNPARDKQQQDR 1274 Query: 1237 VENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 + VQ+ + + LPPA+R V++IRWMIEELRV+ FAQ LGTPYP+S++RI +AM+ Sbjct: 1275 IAVVQREYADLLAALPPAKRRTVAVRQIRWMIEELRVNVFAQALGTPYPVSEQRIYRAMD 1334 >UniRef50_B5GG28 ATP-dependent helicase n=3 Tax=Streptomyces RepID=B5GG28_9ACTO Length = 1333 Score = 1597 bits (4134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/1320 (59%), Positives = 990/1320 (75%), Gaps = 31/1320 (2%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 T L RL L RD R RRL G ++V+ P+A+ A+ E+ EI +A ++ R A Sbjct: 10 TSADLAPRLALLAPRDAQRLGRRLEGTRRVRKPEARSAVLAEIEAEITKAEERLAERAAH 69 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 PE+ YP LPVS KK DI +AIR HQVVIVAGETGSGKTTQ+PKIC+ELGRG++G+IGH Sbjct: 70 VPEVAYPPQLPVSAKKDDIADAIRAHQVVIVAGETGSGKTTQIPKICLELGRGVRGMIGH 129 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAARTVA R+A EL T G +G+KVRF+D VS T VKLMTDGILLAEIQ DR Sbjct: 130 TQPRRLAARTVAERVASELDTPLGEAVGWKVRFTDQVSRGTYVKLMTDGILLAEIQTDRE 189 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L YDTIIIDEAHERSLNIDFLLGYL +LLPRRPDLK+IITSATIDPERFSRHF +API+ Sbjct: 190 LRAYDTIIIDEAHERSLNIDFLLGYLAQLLPRRPDLKVIITSATIDPERFSRHFGDAPIV 249 Query: 248 EVSGRTYPVEVRYRPIV-EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDT 306 EVSGRTYPVEVRYRP++ E++++ +RDQ+ AI DAV+EL +E GDIL+F+SGEREIRDT Sbjct: 250 EVSGRTYPVEVRYRPLLAEDSEEPDRDQVTAIIDAVEELRREPSGDILVFLSGEREIRDT 309 Query: 307 ADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG---RRIVLATNVAETSLTVPGIKYV 363 ADAL K TE+LPLYARLS++EQNRVF+ SG RRIVLATNVAETSLTVPGIKYV Sbjct: 310 ADALEKRKFPFTEVLPLYARLSHAEQNRVFKRASGDSARRIVLATNVAETSLTVPGIKYV 369 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 IDPGTARISRYS RTKVQRLPIE ISQASANQRKGRCGR S+GIC+RLYSE+DF +RPEF Sbjct: 370 IDPGTARISRYSSRTKVQRLPIEAISQASANQRKGRCGRTSDGICVRLYSEEDFEARPEF 429 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 TD EILRTNLASVILQMT+ GLG+I FPF++ PD RNI+DGV+LL+ELGA+ +++ Sbjct: 430 TDAEILRTNLASVILQMTSAGLGEIEKFPFIDPPDHRNIRDGVQLLQELGALDPEQKDPR 489 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +LT GR+L+QLPVDPRLARMVLEA ++GCVRE M++ +ALS+QDPRERP +KQ +D+ Sbjct: 490 KRLTQTGRRLAQLPVDPRLARMVLEADRNGCVREVMVVAAALSLQDPRERPSEKQAQADQ 549 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H RF D+ SDFLAF+NLW Y+ EQQKALSS+AFRR+CR ++LNYLR+REWQDIY Q+R Sbjct: 550 FHARFKDETSDFLAFLNLWTYIREQQKALSSSAFRRMCRNEFLNYLRIREWQDIYAQVRS 609 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADK-----------------QEYTG 646 V ++LG+ VN++ + ++H++LL GLLSHIGMKD + EY G Sbjct: 610 VAQQLGLHVNTDDSPPEQVHVSLLAGLLSHIGMKDVKESTAKDPAQQAKEKRRGGNEYLG 669 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSE 706 AR A+F++FPGS LFKKPP++VM AELVETSRLW R+ ARI+PEW E + HL+KRTYSE Sbjct: 670 ARGAKFAVFPGSALFKKPPRYVMSAELVETSRLWARVNARIEPEWAERLGAHLVKRTYSE 729 Query: 707 PHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFF 766 PHWE+ Q AVMA EKVT+YG+ + A RKVNY +IDP + RELFIR+ALVEGDW+T H FF Sbjct: 730 PHWEKDQAAVMAYEKVTLYGVTLAAQRKVNYGRIDPEVSRELFIRNALVEGDWRTHHKFF 789 Query: 767 RENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPD 826 +N +L EVEELEH++RRR I+VDDE LF+FYD+R+ V+S HFDSWWK+ +E P+ Sbjct: 790 ADNRRLLTEVEELEHRARRRGIVVDDEALFDFYDERVPTHVVSGAHFDSWWKRKRQEEPE 849 Query: 827 LLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQV 886 LL+FE+SML+ E A+ I+K DYP+ W QG L LR++YQFEPGADADGVTVH+PL +LNQV Sbjct: 850 LLDFERSMLLTEAAQGITKDDYPDRWRQGPLDLRVTYQFEPGADADGVTVHVPLQVLNQV 909 Query: 887 EESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERE 946 GF+WQIPGLR E+V LI+SLPKPVRRN+VPAPN+A FL PL PL +L + Sbjct: 910 TSEGFDWQIPGLREEVVTELIRSLPKPVRRNYVPAPNFARRFLATASPLSAPLTTALAKG 969 Query: 947 LRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLS- 1005 L++M GV V ED+ +VPDHLKITFR+VD++ +KL E + L L+D L+ K ++ LS Sbjct: 970 LQQMVGVPVTAEDFDVAKVPDHLKITFRIVDERRRKLAEDKDLDALRDRLRPKARQALSR 1029 Query: 1006 -------AVADDGIEQSGLHIWS-FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 +E+ GL W G L + +E +RG VKA+PALVDE D+V ++LFD Sbjct: 1030 AAAATAERAGQASVERKGLTDWGDLGTLSKVFETRRGGQPVKAYPALVDEGDTVGVRLFD 1089 Query: 1058 NPLEQKQAMWNGLRRLLLLNIP-SPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 + EQ+ AMW+G RRL+L NIP +P K+ ++L N KL L NP+G + L DC + Sbjct: 1090 SEEEQRVAMWHGTRRLILRNIPVNPAKFARDRLTNPQKLALSANPHGSMQALFADCATAA 1149 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 D+LI+ GGP W E G+ L+E VRA + DT V+ V+Q++ A +RLK Sbjct: 1150 ADRLIERAGGPAWDEAGYRKLYEFVRAGIVDTTVNAVAAVQQVVAAWQACERRLKSTRSP 1209 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 + L+D++ Q+ LV+ GFV G RL D LRYL+A+++RL+++ + RD +M K Sbjct: 1210 ALLANLADVREQLDELVHPGFVAEAGLLRLSDLLRYLRAVDRRLQQMPANAQRDTTRMEK 1269 Query: 1237 VENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 V ++ + + + P R + ++IRWM+EELRVSYFA LGT YP+SDKRI++A++ Sbjct: 1270 VREMRDEYLWLLEQFPQGRPVPREARDIRWMVEELRVSYFAHALGTAYPVSDKRIVKAID 1329 >UniRef50_Q482P9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=Q482P9_COLP3 Length = 1375 Score = 1473 bits (3814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 744/1366 (54%), Positives = 969/1366 (70%), Gaps = 75/1366 (5%) Query: 8 TFTALQQRLDSL---MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAK--------EIDQ 56 +F+ LQ+ + L D +RF +RL +KK + Q E+A ++ + Sbjct: 11 SFSHLQKLFELLPQAKKSDAVRFRKRLINLKKTITKEVGQKSPTELAMLSLSEKHIKLVE 70 Query: 57 AAGKVLLREA--------ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTT 108 + +LR + P+ITYP+ LP+S+ I AI +QVVI+AGETGSGKTT Sbjct: 71 PLQQHILRSIQDKQQKIRSLPKITYPEGLPISENAAQISAAIDANQVVIIAGETGSGKTT 130 Query: 109 QLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNT 168 Q+PKIC+ELGRG+ GLIGHTQPRR+AARTVANRIAEEL T+ G +GYKVRF+D VS+ + Sbjct: 131 QIPKICLELGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQS 190 Query: 169 MVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIIT 228 +KLMTDGILLAE+Q+DRLL++YDTIIIDEAHERSLNIDF+LGYLK++L +RPDLK+IIT Sbjct: 191 YIKLMTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIIT 250 Query: 229 SATIDPERFSRHFNN-----APIIEVSGRTYPVEVRYRPIVEEA----DDT---ERDQLQ 276 SATIDP+RF++HF++ APIIEVSGRT+PVE+RYRP+ + A DD E D + Sbjct: 251 SATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIIS 310 Query: 277 AIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVF 336 I AVDELS +GDIL+F++GEREIRDTA AL K NLRHT +LPLYARL+ SEQN++F Sbjct: 311 GILSAVDELSDCGNGDILVFLNGEREIRDTAAALVKANLRHTNVLPLYARLTVSEQNQIF 370 Query: 337 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 + HSGR IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP+SQASANQR Sbjct: 371 KPHSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQR 430 Query: 397 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GRCGRVSEGICIRLYSEDD+ SR EFTDPEILRTNLA+VILQM AL LGDIA FPFVEA Sbjct: 431 SGRCGRVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEA 490 Query: 457 PDKRNIQDGVRLLEELGAITTDEQA----------SAYKLTPLGRQLSQLPVDPRLARMV 506 PD RNI DGVRLLEE+ A+ + E A +A +LT GR L++ P+DPRLA+MV Sbjct: 491 PDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMV 550 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 + + + GC+ + +II SALSIQDPRERP +KQQ SDEKH RF DK SDF++ +NLW Y+ Sbjct: 551 VSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYIN 610 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS------------ 614 EQ+K L+ N FR+LC+ ++L+Y+R+REWQDI++QL+ +KE I + S Sbjct: 611 EQKKDLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKEQQITLTSIDYQFSMPNVQQ 670 Query: 615 ---------------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 + + +H ALL+GLLSHIG +D ++ EY GAR +F IFPGS Sbjct: 671 GQAASTAVDKTKETEQDSALTPVHQALLSGLLSHIGQQDENR-EYKGARGMKFFIFPGSA 729 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 L KK PKW+M AELVETSRL+ R+ A+IDP W+EP+AQHL+KR YSEPHWE+ QGAVMA Sbjct: 730 LTKKSPKWLMSAELVETSRLFARMNAKIDPLWLEPLAQHLVKRNYSEPHWEKKQGAVMAF 789 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 E+VT+YGL IV+ RK+N++ I+P CRE+FIR ALV GD + F +N +L +EEL Sbjct: 790 EQVTLYGLSIVSKRKINFNVIEPVTCREIFIREALVNGDCVIKEKFLSKNQQLVESIEEL 849 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E K+RRRD L+D++ L +FY ++ V R F +WWKK RE LL+F K+ L+ E Sbjct: 850 EQKARRRDFLIDEQHLVDFYSDKLPDTVNCQRSFLAWWKKAKRENEQLLDFSKAFLLNES 909 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 ++++S ++YP+ W Q ++ L L+Y F PG DG++V +P+ LLNQV+E GF+W IP LR Sbjct: 910 SDELSTIEYPDVWQQDSITLPLTYHFSPGDIDDGISVVLPIALLNQVQEVGFDWLIPALR 969 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRED 959 EL IALIK+LPK +RRNFVPAPNYA+A L + + L D+L ++L RMTGV + + Sbjct: 970 DELAIALIKALPKTLRRNFVPAPNYAQACLAAMPAEQGHLQDALAKQLLRMTGVRLPEDA 1029 Query: 960 WHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHI 1019 W +P HL + F+VVDDK K +K+GR L +LK L+GKV+ ++ VA+ GIEQ+ L Sbjct: 1030 WQDITLPIHLTMNFQVVDDKGKLIKQGRDLNELKAELQGKVKASIKQVAEKGIEQADLTK 1089 Query: 1020 WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIP 1079 W FG LP+ YE+K N +KA+PALVD ++SVAI+LF+ ++AM G+ RL+LLNIP Sbjct: 1090 WDFGSLPKGYEKKVANITIKAFPALVDHKNSVAIELFEQEQHAQEAMLKGISRLILLNIP 1149 Query: 1080 SPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDA------NGGPVWTEEG 1133 +P+KYL EKLPNKAKLGLYFNP+G + EL+ DCI L+ NG E+ Sbjct: 1150 TPLKYLQEKLPNKAKLGLYFNPFGSINELLQDCIQGACLSLVQQFSQHQNNGLLPREEKQ 1209 Query: 1134 FAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLV 1193 FA + VRAE+ D V+ A +VE+ LT + K++KG V + + DIK Q LV Sbjct: 1210 FAKCCDYVRAEIADCVLTAAIKVERALTLRHEVTKKMKGSVPLNVIQSHGDIKQQCEQLV 1269 Query: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPP 1253 ++GFVT +G +L D +RYLQ + +RLEKL DP++DR ++++V V +Q ++K Sbjct: 1270 FKGFVTYSGLSKLDDIIRYLQGMLRRLEKLPSDPNQDRLKLIEVSKVNDMYQVIMSKQRK 1329 Query: 1254 ARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + D ++ RW+IEELR+S FAQ LGT PIS KRIL ++ S Sbjct: 1330 DKPVDNELLATRWLIEELRISLFAQNLGTSAPISVKRILNYLKGFS 1375 >UniRef50_D1VDH3 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. EuI1c RepID=D1VDH3_9ACTO Length = 1548 Score = 1469 bits (3804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 757/1434 (52%), Positives = 975/1434 (67%), Gaps = 136/1434 (9%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++ L RL +LMLRD R +RRL V+ + +++ + E++ A + Sbjct: 115 LGAAERTELAGLSARLPALMLRDGHRLARRLDAVRHDPDAESRARTIPAITDEVETAEIR 174 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V LR A P + YP LPVSQ+K +IL AIRD+QVVIVAGETGSGKTTQ+PKIC+ELGRG Sbjct: 175 VALRRDAVPALKYPAELPVSQRKDEILAAIRDNQVVIVAGETGSGKTTQIPKICLELGRG 234 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEP-GGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 + GLIGHTQPRRLAARTVA+RIAEE GG IGY+VRF+D V D+T+VKLMTDGILL Sbjct: 235 VTGLIGHTQPRRLAARTVADRIAEETGAGSLGGIIGYQVRFTDQVGDDTLVKLMTDGILL 294 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 AE+ DRLL QYDT+IIDEAHERSLNIDF+LGYL+ +LPRRPDLK++ITSATI+ ERFSR Sbjct: 295 AELGTDRLLRQYDTLIIDEAHERSLNIDFILGYLRRILPRRPDLKVVITSATIETERFSR 354 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ---LQAIFDAVDELSQESHGDILIF 296 HF +APIIEVSGRTYPVEVRYRP+V+ D + AI DAVDELS E GD+L+F Sbjct: 355 HFGDAPIIEVSGRTYPVEVRYRPVVDPDDPEADPDRDVITAICDAVDELSAEGLGDVLVF 414 Query: 297 MSGEREIRDTADALNKL---NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 +SGEREIRDTADAL + L EILPLYARLS +EQ+RVFQ H GRRIVLATNVAET Sbjct: 415 LSGEREIRDTADALARRPSKELLPREILPLYARLSTAEQHRVFQPHPGRRIVLATNVAET 474 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLTVPGIKYV+D GTAR+SRYS+R KVQRLPIEP+SQASANQR GRCGR S+GIC+RLY+ Sbjct: 475 SLTVPGIKYVVDAGTARVSRYSHRLKVQRLPIEPVSQASANQRAGRCGRTSDGICVRLYA 534 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 EDDF +RPE+TDPEILRTNLASVIL M +LGLG++A +PF++ PD R + DG+ LL ELG Sbjct: 535 EDDFDARPEYTDPEILRTNLASVILSMASLGLGEVADYPFLDPPDPRQVTDGLALLHELG 594 Query: 474 AITTDEQASAY------------------------------------KLTPLGRQLSQLP 497 A + A +LTPLGR+L++LP Sbjct: 595 AFEAVRPSRASAPVAPVTPAAPAGPAAPAGSAGSVDPAERAGEGRTPRLTPLGRRLARLP 654 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 +DPRLARM+L A + G + E +IIT+AL++ D RERP D QQA+ EKH RF + SDFL Sbjct: 655 IDPRLARMILAADEQGALAEVLIITAALAVGDVRERPADAQQAATEKHARFTEPTSDFLG 714 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA 617 ++NLWNYL E+ LSSN FRRLCR +YL+YLRVREWQD+++QLRQ + LG+ NS PA Sbjct: 715 YLNLWNYLREKAAELSSNQFRRLCRAEYLHYLRVREWQDVHSQLRQAARSLGLSTNSAPA 774 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 +++H ALLTGLLSHIG+ D +K++Y GAR ARF++FPGS LFKKPP+WV+ AELVETS Sbjct: 775 SPQQVHSALLTGLLSHIGLFDPEKRDYAGARGARFAVFPGSALFKKPPRWVVAAELVETS 834 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNY 737 RLWGR+AA+I+PEWVEP+A HLI+R+YSEPHW R AV+ATEKVT+YG+PIVAAR VNY Sbjct: 835 RLWGRVAAKIEPEWVEPLAGHLIRRSYSEPHWSRRSAAVLATEKVTLYGVPIVAARSVNY 894 Query: 738 SQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 S IDPALCRELFIRHALVEGDW+T+HAFF EN +L ++ +LEH++RRRDI+VDD+T+F+ Sbjct: 895 SGIDPALCRELFIRHALVEGDWETKHAFFAENSRLLSDAADLEHRARRRDIVVDDQTIFD 954 Query: 798 FYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFW---HQ 854 FYD RI DV+S RHFD+WWKK TP LL F+ +ML+ E A+ + D+P+ W Sbjct: 955 FYDARIPVDVVSGRHFDAWWKKTRPRTPGLLTFDPAMLVSETAKGVRADDFPDSWPAGRD 1014 Query: 855 GNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV 914 G ++ L+YQFEPG+ ADGVT HIPL +LNQVE GF WQ+PGLR +LV LI+SLPK + Sbjct: 1015 GEHRVSLTYQFEPGSAADGVTAHIPLAILNQVEPDGFTWQVPGLREDLVTELIRSLPKAL 1074 Query: 915 RRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRM-TGVTVDREDWHWDQVPDHLKITF 973 RR++VPAPNYA A LGRV P + PLL LEREL R+ G TV R D D++P HL+ITF Sbjct: 1075 RRSYVPAPNYARAVLGRVGPADGPLLAVLERELNRIGGGTTVSRADLDLDRLPPHLRITF 1134 Query: 974 RVVD------------------------DKNKK--------LKEGRSLQDLKDALKGKVQ 1001 RV D D+ +K L EG+ L +LK L K+ Sbjct: 1135 RVYDGTGGRRTGGGQADDDGQAGRDGGGDRRQKSAESARRTLAEGKDLDELKRTLAPKLT 1194 Query: 1002 ETLSAVADDGIEQSGLHIWS-FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 +SA A +E++GL W G +P + E++ G ++V+ +PALV E VA+++ Sbjct: 1195 AAVSA-AGGNLERTGLTGWGDLGTIPRTVERRAGRHQVRGFPALVAEPGGVALRVLATEA 1253 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 + +A G R LLL ++ SPI+Y++ +L N KL L +P+ V L+DD I+ D L Sbjct: 1254 DAARAHPLGTRALLLASVASPIRYINTQLSNATKLALRHHPHDSVGALLDDAIAAAADAL 1313 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNI-------------- 1166 I GGPVW E GF L ++VRAEL + + + + E++LT ++ Sbjct: 1314 IAEAGGPVWDEAGFERLRDEVRAELPERSLAVVRAAERVLTLAHDVETRIDALTGRPTAG 1373 Query: 1167 --------------------------------------NKRLKGRVDMTMALGLS--DIK 1186 N R +G +++ AL S D++ Sbjct: 1374 RASARPVQLTDLRSLGSAFAAAQGGKAQGGKAQSAKAQNGRAQGAANLSPALTASIEDLR 1433 Query: 1187 AQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQ 1246 Q+ L+Y GF+ G G RL D RYL +RL++L D ++ ++ KV V+ A+ + Sbjct: 1434 RQLAELIYPGFLAGAGADRLDDLARYLTGALRRLDRLPADATAEQPKLAKVTRVRTAYDE 1493 Query: 1247 W-INKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + LPP D+ +RWMIEELR+S FAQ L TPYP+S++R+ ++M++++ Sbjct: 1494 LAADLLPPGTAPGPDLTRLRWMIEELRISLFAQTLRTPYPVSEERLYRSMDELA 1547 >UniRef50_Q0S1M3 ATP-dependent helicase hrpA n=5 Tax=Corynebacterineae RepID=Q0S1M3_RHOSR Length = 1296 Score = 1406 bits (3639), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/1240 (56%), Positives = 906/1240 (73%), Gaps = 15/1240 (1%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P I YPD+LPVSQ++ DI +AI ++QVVIVAGETGSGKTTQ+PKIC+ELGRG++GLIGHT Sbjct: 61 PVIEYPDSLPVSQRRDDIAKAIAENQVVIVAGETGSGKTTQIPKICLELGRGVRGLIGHT 120 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRRLAARTVA RIAEEL++E G +GY VRF+D VSD T+VKLMTDGILLAEIQ+DR+L Sbjct: 121 QPRRLAARTVAERIAEELRSELGETVGYTVRFTDQVSDGTLVKLMTDGILLAEIQRDRML 180 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 243 +YDT+IIDEAHERSLNIDF+LGYL++LLPRRPDLK+IITSATIDPERF++HF Sbjct: 181 RRYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPERFAQHFATDDGVP 240 Query: 244 APIIEVSGRTYPVEVRYRPI-VEEADDT-ERDQLQAIFDAVDELSQESHGDILIFMSGER 301 API+EVSGRT+PVE+RYRP+ V+ D T +RD + A+ +AV+ELS E GDIL+F+SGER Sbjct: 241 APIVEVSGRTFPVEMRYRPLTVDVGDQTFDRDPVDAVCEAVEELSGEGDGDILVFLSGER 300 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 EIRDTADAL LR TEI+PLYARLS +EQ++VF H+GRR+VL+TNVAETSLTVPGI+ Sbjct: 301 EIRDTADALRDRRLRGTEIVPLYARLSAAEQHKVFTPHTGRRVVLSTNVAETSLTVPGIR 360 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YV+DPGTARISRYS RTKVQRLPIEPISQASA QR GRCGRV+EGICIRLYSE+DF +RP Sbjct: 361 YVVDPGTARISRYSVRTKVQRLPIEPISQASARQRSGRCGRVAEGICIRLYSEEDFEARP 420 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 FT+PEILRTNLASVILQMTALGLGDIAAFPFV+ PD R ++DG+ LLEELGAI Q Sbjct: 421 AFTEPEILRTNLASVILQMTALGLGDIAAFPFVQPPDPRAVRDGIGLLEELGAIERKAQN 480 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 LT +GR+L+Q+PVDPR+ARM++EA ++GC+ E ++I SALSIQD RERP + QQA+ Sbjct: 481 EQPVLTAVGRELAQIPVDPRMARMLVEAHRNGCLAEVLVIVSALSIQDVRERPAEFQQAA 540 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 DEKH RF + SDFLAF+ LW YL EQ+ LSSN FR++CR ++L++LR+REWQD++ QL Sbjct: 541 DEKHARFTVENSDFLAFLELWKYLREQRNELSSNQFRKMCRNEFLHWLRIREWQDLHGQL 600 Query: 602 RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF 661 RQ+ + LG PA IH +LL GLLSHIG+++ DK+++ GAR +RF++FPGS LF Sbjct: 601 RQITRGLGWDTTDTPAGEAAIHQSLLAGLLSHIGLREGDKRDFLGARGSRFAVFPGSSLF 660 Query: 662 KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEK 721 KKPP+WVM AELVETSRLW R++ARI+PEW E +A HL+KRTYSEPHW +GA MA E+ Sbjct: 661 KKPPRWVMAAELVETSRLWARMSARIEPEWAEKLAPHLVKRTYSEPHWSSKRGAAMAYER 720 Query: 722 VTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEH 781 VT+YG+P+VA R V YS IDP R+LFIRHALV+G+WQT+H FF N L +VEELEH Sbjct: 721 VTLYGIPLVARRAVTYSTIDPETSRDLFIRHALVQGEWQTQHKFFHANRALLEDVEELEH 780 Query: 782 KSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAE 841 ++RRRDILVDD+TL++FYDQR+ + +SARHFDSWWK R+ PDLL F ++ ++ + Sbjct: 781 RARRRDILVDDDTLYDFYDQRVGPEAVSARHFDSWWKVARRKNPDLLTFTQATVVNAESA 840 Query: 842 KISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRE 901 + +YP+ W QG+++ L+YQFEPG + DGVT IP+ LL + GF+W +PG+R E Sbjct: 841 AVLGGEYPDAWRQGDMQFPLTYQFEPGTEDDGVTARIPIALLAGLRPVGFDWLVPGMRVE 900 Query: 902 LVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWH 961 LV ALIK+LPK +RR VPAP++A A L VKP PL ++ REL R+ +D +D+ Sbjct: 901 LVTALIKTLPKTLRRQVVPAPDFAAAALAAVKPRSEPLTMAMARELSRLGACRIDPKDFD 960 Query: 962 WDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW- 1020 +PDHL++TF VD+K L + L L+ +L +V+ ++ A + E+ W Sbjct: 961 VTALPDHLRMTFAAVDEKGAVLGRDKDLVSLRKSLAPRVEVEVAKAASNS-ERPPALTWT 1019 Query: 1021 --SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 + G L + ++ G KV +PALV E D VA+++ Q+ AM G RRLLL + Sbjct: 1020 PATLGSLEATVTRELGGQKVTGYPALVPEGDGVAVRVLSTAAAQRSAMRAGTRRLLLAAV 1079 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALH 1138 P+ K + L N +L L NP G + LIDDC + +++I A+G PV T + F AL Sbjct: 1080 PTQAKTVTSGLSNAQRLALGQNPDGSLDALIDDCRNAAANQVIAAHGTPVRTPQEFDALV 1139 Query: 1139 EKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFV 1198 RAE+ V + + V +L A + RL ++ D++ Q L++ GFV Sbjct: 1140 ATARAEMARNVAVLLRLVSPVLEA----DHRLTVVLERATGEAADDVREQRQSLLFPGFV 1195 Query: 1199 TGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRED 1258 G RL + RYL A RL+ L RD+ M ++ V +++ + LP R+ Sbjct: 1196 ADIGATRLRELPRYLAAAAARLDALPGSAPRDQKGMDVLDRVYAGYERMLAGLPEERQHT 1255 Query: 1259 EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +V I WMIEELRVS FAQ LGTP P+S+KR++ AME++ Sbjct: 1256 PEVDAIHWMIEELRVSLFAQTLGTPIPVSEKRVISAMEKV 1295 >UniRef50_A9WQ04 ATP-dependent helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WQ04_RENSM Length = 1296 Score = 1367 bits (3538), Expect = 0.0, Method: Compositional matrix adjust. Identities = 711/1297 (54%), Positives = 898/1297 (69%), Gaps = 78/1297 (6%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG------L 124 ITYP LPVS ++++++ AIRDHQVVI+AGETGSGKTTQ+PK+C+ELG G L Sbjct: 5 ITYPPELPVSARREELMAAIRDHQVVIIAGETGSGKTTQIPKMCLELGLTEPGKDGKPRL 64 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRRLAARTVA RIA EL + G +G++VRF+ VS T VK+MTDGILLAEIQ+ Sbjct: 65 IGHTQPRRLAARTVAERIAAELDVKIGEEVGFQVRFTGEVSRQTKVKVMTDGILLAEIQR 124 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-- 242 D+LL +Y T+IIDEAHERSLNIDF+LGYL+++LP+RPDLKIIITSATIDPERF++HF Sbjct: 125 DKLLHRYSTLIIDEAHERSLNIDFILGYLRQILPKRPDLKIIITSATIDPERFAQHFAID 184 Query: 243 --NAPIIEVSGRTYPVEVRYRPI---------VEEADDTERDQLQAIFDAVDELSQESHG 291 API EVSGRTYPVE+RYRP+ E D ++D L A+ DAV+ELS E+ G Sbjct: 185 NVPAPIEEVSGRTYPVEIRYRPLDGSDGEPAEQSEDDSEDKDPLDAVCDAVEELSGEAPG 244 Query: 292 DILIFMSGEREIRDTADAL-----NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 D+LIF SGEREIRD A+AL + LR EILPL+ARLS +EQ+ VF S RRIVL Sbjct: 245 DVLIFFSGEREIRDAAEALRGRFAHHPRLREAEILPLFARLSLAEQHAVFSPGSRRRIVL 304 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATNVAETSLTVPGIKYVID GTARISRYS+RTKVQRLPIE ISQASANQR GRCGRVS+G Sbjct: 305 ATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERISQASANQRAGRCGRVSDG 364 Query: 407 ICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG----DIAAFPFVEAPDKRNI 462 ICIRLYSE DF R EFTDPEILRTNLA+VILQM+A+G+ D+A+FPFVE PD + I Sbjct: 365 ICIRLYSEADFQGRREFTDPEILRTNLAAVILQMSAIGVAREPKDVASFPFVEPPDAKAI 424 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 DGV LL ELGA+ D ++P+GRQL+QLPVDPRL RM++E+ K GC RE MI+ Sbjct: 425 ADGVALLSELGALQPDG-----GISPVGRQLAQLPVDPRLGRMIVESGKRGCAREVMILA 479 Query: 523 SALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCR 582 +AL+IQDPRERP +K+Q +DEKH+RF D+ SDF F+NLW YL E+QK LSS AFRRLC+ Sbjct: 480 AALTIQDPRERPTEKRQIADEKHKRFSDENSDFTGFLNLWRYLQEKQKELSSTAFRRLCK 539 Query: 583 TDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKD 638 +++NYLRVREWQD++ QLRQ+ K L I +++ + +HI +LL GLLSH+G+ D Sbjct: 540 AEFINYLRVREWQDLFAQLRQLAKPLNITLSTGEVDPVGLHIPVHQSLLAGLLSHLGLFD 599 Query: 639 ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 K+EY GAR +RF+IFPGS LFKK P WVM AELVETSRLW R+ ARIDP W E VA Sbjct: 600 DRKREYAGARGSRFAIFPGSALFKKNPDWVMSAELVETSRLWARVNARIDPIWAEEVAAG 659 Query: 699 LIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD 758 L+KR+YSEPHW + G+VMA EKVT++G+PIVA R++NY +ID L RELFIRHALVEGD Sbjct: 660 LVKRSYSEPHWSKRNGSVMAYEKVTLFGVPIVAQRRINYGRIDAPLSRELFIRHALVEGD 719 Query: 759 WQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWK 818 W+T H FF N + AEVEELE + RRRD+ VDDETLFEFYD R+ +V+S RHFD WWK Sbjct: 720 WRTHHKFFHRNQSVLAEVEELETRMRRRDLRVDDETLFEFYDARVGAEVVSERHFDKWWK 779 Query: 819 KVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA--------- 869 E P LL+F+ +++ E A+ + + YP G +L LSY+F+P + Sbjct: 780 SARHENPTLLDFDPGVVMTEDAD-LDETAYPKSIRHGEFELALSYEFQPSSQYLAAGTPV 838 Query: 870 -DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAF 928 D+DGVTV +P+ LNQ+E++ F+WQIPGLR ELV ALIKSLPKPVR+NFVPAP+ Sbjct: 839 NDSDGVTVTVPVLFLNQLEDAPFKWQIPGLRAELVTALIKSLPKPVRKNFVPAPDVGRQA 898 Query: 929 LGRVKPLELPLLD----SLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLK 984 + P D SLE LRR+ G + W+WD VP HL++TF+VVD K L Sbjct: 899 ATALAADLDPSQDDLESSLELALRRLRGHVIPPGSWNWDAVPVHLRMTFQVVDSAGKILD 958 Query: 985 EGRSLQDLKDALKG----KVQETLSAV-------------------ADDGI-EQSGLHIW 1020 +G+ L L+++L G + E+L A+ A+ I E SGL W Sbjct: 959 KGKDLAALQESLAGATRRAIAESLGAMPKTAAPKNPAQRGPSAAVAAEPSIRELSGLTSW 1018 Query: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 S G + S + + V +PAL DE + +++F N E + G+ RLL L IPS Sbjct: 1019 SLGTIERSVSRLVNGHSVTGYPALTDEGTTAGLRVFQNEDEALVSHRAGVIRLLALRIPS 1078 Query: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 P +Y+ E L N KL NP+GKV +LI DC +DKLI +TE F AL+E Sbjct: 1079 PDRYVLEHLSNSEKLTFSQNPHGKVTDLIADCTLAAIDKLIPEELP--FTEAEFDALYEA 1136 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 RAEL DTV + VE+IL + I +LKG + + L+D++AQ+ GLVY GF++ Sbjct: 1137 SRAELIDTVFAVVAVVERILASARRIETQLKGSTSLALISALNDVRAQLDGLVYAGFISR 1196 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 G+ +L R+L AIEKRLEKL + RD M V+ ++ + + L R + Sbjct: 1197 TGYAQLSQLPRFLVAIEKRLEKLPTNVQRDGLNMAAVQRLEDEYDDAVAALAAGRSVPQS 1256 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 ++++RWM+EELRVS FA +LGT Y +S+KRI QAM Q Sbjct: 1257 LRKVRWMLEELRVSLFAVELGTAYSVSEKRIRQAMSQ 1293 >UniRef50_D2S4R8 ATP-dependent helicase HrpA n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S4R8_9ACTO Length = 1333 Score = 1331 bits (3444), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/1336 (52%), Positives = 914/1336 (68%), Gaps = 57/1336 (4%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI 71 L+ RL L L D R RRL G +K ++ +A+ +A ++ A ++ R AA P + Sbjct: 8 LRARLAGLTLEDEHRLRRRLDGTRKTRDAEARARQRARIAADVAAAEERIARRRAAVPTV 67 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 YP LPVS ++ DI A+R+HQVV+VAGETGSGKTTQLPKI +ELGRG+ G IGHTQPR Sbjct: 68 RYPAELPVSARRDDIAAALREHQVVVVAGETGSGKTTQLPKIALELGRGVTGRIGHTQPR 127 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R+AARTVA RIAEEL+T G +G+KVRF+D V D+T+VK+MTDG+LLAEI +DRLL QY Sbjct: 128 RIAARTVAERIAEELETPLGEVVGWKVRFTDQVGDSTLVKVMTDGVLLAEIGRDRLLRQY 187 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN-------- 243 DT+IIDEAHERSLN+DFLLGYL LLPRRPDLK++ITSATID +R ++HF Sbjct: 188 DTLIIDEAHERSLNVDFLLGYLARLLPRRPDLKLVITSATIDVDRIAKHFTGLGEKGQSA 247 Query: 244 --------------APIIEVSGRTYPVEVRY---RPIVEEADDTERDQLQAIFDAVDELS 286 P++EVSGRTYPVEVRY + D +RDQ+ AI DAV+EL+ Sbjct: 248 GLGDDGHGSADGAEVPVVEVSGRTYPVEVRYRPVVDPDDPDADPDRDQVTAIADAVEELA 307 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 E GD+L+F++GEREIRDTAD L + E+LPLY+RLS ++Q+RVF H+GRR+VL Sbjct: 308 AEGPGDVLVFLAGEREIRDTADVLTE-RFPSVEVLPLYSRLSAADQHRVFAPHTGRRVVL 366 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATNVAETSLTVPGI+YV+DPGTARISRYS R KVQRLPIEPISQASA QR GRCGR SEG Sbjct: 367 ATNVAETSLTVPGIRYVVDPGTARISRYSSRLKVQRLPIEPISQASARQRSGRCGRTSEG 426 Query: 407 ICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 I IRLY+E+D+ RPE+TDPEILRT+LASV+LQM AL LGD+A FPF++ PD+R + DGV Sbjct: 427 IAIRLYTEEDYEGRPEYTDPEILRTSLASVLLQMAALELGDVADFPFIDPPDRRAVADGV 486 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 LLEELGA+ D LTP GR L+ LP+DPR+ARMV+EA + G + E ++I + L+ Sbjct: 487 ALLEELGALGEDG-----GLTPTGRALATLPLDPRMARMVVEADRRGVLEEVLVIAAGLT 541 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 IQDPRERP + QQA+D H RF D+ SDFLA +NLW Y+ EQQ+ALS + FRR + ++L Sbjct: 542 IQDPRERPSEHQQAADTAHARFADENSDFLALLNLWRYVTEQQEALSGSQFRRTLKREFL 601 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVN---SEPAEYREIHIALLTGLLSHIGMK------ 637 +YLR+REWQD+Y QLR + LG+ +EP E R +H ALL GLLSH+G++ Sbjct: 602 HYLRIREWQDLYGQLRSTARRLGMTTGELATEPDE-RGVHTALLAGLLSHVGLQVEEGKG 660 Query: 638 -----DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 +EY GARNARF + PG+ L KKPP+WV+ AELVETSRL+ R ARIDPE V Sbjct: 661 RDGDRRRGGREYLGARNARFVLAPGTPLAKKPPRWVVAAELVETSRLFARTVARIDPEVV 720 Query: 693 EPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRH 752 E +A+HL+KR YSEP W+ +G+V+ATE+VT+YG+P+V R+V Y IDP + RELFIRH Sbjct: 721 ERLAEHLVKRQYSEPRWDAKRGSVVATERVTLYGIPLVVGRRVQYGSIDPVVSRELFIRH 780 Query: 753 ALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARH 812 ALVEG+W T H F+ +N K V ELE ++RRRDI VDDETLFE YD RI DV+S RH Sbjct: 781 ALVEGEWTTHHRFWHDNQKAMQRVAELEERARRRDIRVDDETLFELYDARIPADVVSTRH 840 Query: 813 FDSWWKKVSRETPDLLNFEKSMLIKEGAE-KISKLDYPN--FWHQGNLKLRLSYQFEPGA 869 FD WWK R TPDLL F ML A ++ D+P+ QG L L LSY F PGA Sbjct: 841 FDRWWKAARRGTPDLLTFTPEMLTNAAAAGQVRVEDFPDEVPLSQG-LTLPLSYAFAPGA 899 Query: 870 DADGVTVHIPLPLLNQVEE--SG--FEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 DGVTV +PL +L+ V E SG + +PGLR ELV AL+++LPK +RR VP P+ Sbjct: 900 PQDGVTVDVPLAVLDTVAERTSGESLAFTVPGLREELVTALLRTLPKQLRRALVPIPDRV 959 Query: 926 EAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 L R+ P E PLL +LERELRR GV V + W DQVPDHL+ TFRVVDD+++ L Sbjct: 960 REVLPRIAPNE-PLLPALERELRRAAGVVVPPDAWAPDQVPDHLRATFRVVDDRHRPLAT 1018 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 G+ LQ L+ + + + +L+A A D +E++G W+FG LP + E +RG + V A PALV Sbjct: 1019 GKDLQALRREVAPQSRASLAAAASD-VERTGQTAWTFGTLPRTVEVRRGGHVVTAHPALV 1077 Query: 1046 DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV 1105 DE +V +++ +E + W G RRLL+L SP + + + L K++L L FNP G++ Sbjct: 1078 DEGTTVGVRVVATEVEATRLTWRGARRLLVLVAGSPARQVVKSLSPKSRLALQFNPDGEI 1137 Query: 1106 LELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 L+DDC+ D+L+ A GGP E FAAL + RA+L D ++VE +L Sbjct: 1138 PALVDDCVDAAADELLAAAGGPPRNEAAFAALVQTARAQLLPLTTDTVRRVEAVLVQARE 1197 Query: 1166 INKRLKGRVDMTMA-LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA 1224 + + + ++D++ QMGGL++RGFV G +RL D +RYL+ + RLEKL Sbjct: 1198 VAVAIGAAPGRRVPEAAVADLRRQMGGLLHRGFVAAAGRRRLPDLVRYLRGMVHRLEKLP 1257 Query: 1225 VDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPY 1284 + RD M +V V ++Q ++P D+ V +RWM+EELRVS FAQ +GTP Sbjct: 1258 ANAVRDELWMQQVAAVSAEYEQLRAQVPSTGAPDDPVARVRWMLEELRVSLFAQTVGTPR 1317 Query: 1285 PISDKRILQAMEQISG 1300 P+S++R+ +A++ ++ Sbjct: 1318 PVSEQRVYKAIDALTA 1333 >UniRef50_B0RGP0 ATP-dependent helicase n=3 Tax=Actinobacteria (class) RepID=B0RGP0_CLAMS Length = 1272 Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 667/1270 (52%), Positives = 893/1270 (70%), Gaps = 49/1270 (3%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 I YP LPVS+ + +I +AIRD+QVVIVAG TGSGKTTQLPKIC+ELGR IGHTQP Sbjct: 5 IVYPPELPVSRMRDEIADAIRDNQVVIVAGATGSGKTTQLPKICLELGRES---IGHTQP 61 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAART++ RIAEEL E G +GY+VRF+D VS +T +KLMTDGILL E+Q+DRLL + Sbjct: 62 RRLAARTISERIAEELGGEVGQLVGYQVRFTDKVSADTRIKLMTDGILLNELQRDRLLKK 121 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATIDP+ FS+HF +API+EVS Sbjct: 122 YDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIITSATIDPQSFSKHFGDAPIVEVS 181 Query: 251 GRTYPVEVRYRPIVEEA------DD----------TERDQLQAIFDAVDELSQESHGDIL 294 GRTYPVE+RYRP+V EA DD +RD L+ I A+DEL+ ES GD+L Sbjct: 182 GRTYPVEIRYRPLVAEAAVAGEDDDLADAPLERPADDRDFLEGINAALDELAAESSGDVL 241 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQ--SHSG--RRIVLATNV 350 +F+SGE EIRD DA+ NL HTE+LPLY RLS+++Q+RVFQ + +G RRIVLATNV Sbjct: 242 VFLSGENEIRDAEDAIRSRNLPHTEVLPLYGRLSSADQHRVFQPSTQAGVRRRIVLATNV 301 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGIKYVID GTARISRYS R+KVQRLPIE ISQASANQR GR GR S+GI IR Sbjct: 302 AETSLTVPGIKYVIDAGTARISRYSVRSKVQRLPIEAISQASANQRSGRSGRTSDGIAIR 361 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYSE+DFL RPEFT+PEILRTNLA+VILQM +LGLGDIAAFPF++ PD R I+DGV LL Sbjct: 362 LYSEEDFLRRPEFTEPEILRTNLAAVILQMVSLGLGDIAAFPFLQPPDSRGIKDGVDLLT 421 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 ELGA+ + LT +GR LS+LP+DPR ARMV+E++KHG RE MII + L+IQD Sbjct: 422 ELGAVIRSPDGTP-ALTQVGRDLSRLPIDPRFARMVVESRKHGVSREVMIIVAGLTIQDV 480 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP++K+ +D++H RF D SDF+ +NLWN+L E++ LSS+AFRR+C+ ++LNY+R Sbjct: 481 RERPLEKRPQADQQHARFVDPSSDFITLLNLWNHLEEKEAELSSSAFRRMCKAEFLNYVR 540 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 VREW+D++ QLRQ+ + L + +N A+ IH +LL GLLSHIG+KDA K++Y GAR + Sbjct: 541 VREWKDVFRQLRQLARPLDLAMNEPKADPDGIHKSLLAGLLSHIGLKDAQKKDYVGARQS 600 Query: 651 RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWE 710 RF +FPGS L KK P +M AELVETSRL+ R A IDP W EP+A L+KRT+SEPHWE Sbjct: 601 RFVVFPGSALAKKQPDAIMSAELVETSRLFARTNAAIDPAWAEPIAGGLVKRTHSEPHWE 660 Query: 711 RAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENL 770 + QGA +A E+VT+YG+PIV R+V +S+IDPA RELFIRHALVEGDW+++ AF R N Sbjct: 661 KKQGATVAWERVTLYGVPIVLKRRVQFSRIDPAYARELFIRHALVEGDWESQQAFDRANR 720 Query: 771 KLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNF 830 +LR E+ E+E ++RRRDIL DDE +FEFYD+RI DV S R F+ WWKK +ETP+LL Sbjct: 721 RLREELAEVEERTRRRDILNDDEAVFEFYDKRIPRDVASTRAFEGWWKKQRQETPELLTM 780 Query: 831 EKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESG 890 L+ A + + +P W QG+ +L L+Y+FEPGA DGVTV +PL LL ++ +G Sbjct: 781 TAEELVASDAMDVDEAAFPPTWQQGDQRLSLTYRFEPGAPDDGVTVQVPLALLARLSPAG 840 Query: 891 FEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL-GRVKP---LELPLLDSLERE 946 F+WQ+PG+RR+LV A+IK+LPK +R+N VPA ++A+ L G +P + ++ Sbjct: 841 FDWQVPGMRRDLVTAMIKALPKALRKNVVPAADWADRLLEGLPEPDPQHPVAFTTTIAGL 900 Query: 947 LRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLS- 1005 + R V V +D+ D++P HL++ FRVVD++ +++ GR L +L+ L + +++++ Sbjct: 901 IMRKAHVRVADDDFDLDRIPAHLRMAFRVVDERGREVAAGRDLTELQARLSSRARDSVAR 960 Query: 1006 -------------AVADDGIEQSGLHIWSFGQLPESYEQKRGN-----YKVKAWPALVDE 1047 A G+E++GL W +LP + +G + ++A+PALVDE Sbjct: 961 ATARPVERVAGAKGPATRGMERTGLTTWDLDELPRFVDTAQGGTGDSRHVIRAYPALVDE 1020 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 +VAI+L +Q +AM G+RRLL+L I +P Y+ + L ++ KL L +PY V Sbjct: 1021 GSTVAIRLMATAEDQARAMPGGVRRLLVLAIANPSAYVKQHLTSQEKLMLATSPYPNVQA 1080 Query: 1108 LIDDCISCGVDKLID--ANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 L DDC+ +D++++ A GG ++++E F ++V + D++ D V +ILT + Sbjct: 1081 LFDDCLLACIDQVLERVAPGGAIYSKELFETARDRVSGVVMDSMFDTVALVNRILTGARD 1140 Query: 1166 INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV 1225 + +K M + L+D + Q+ GLV+ GFV+ G RL YL + R+++L Sbjct: 1141 AERAIKQATSMQLIGALTDAREQLAGLVHPGFVSATGLARLQRLPAYLSGLTHRVQRLPD 1200 Query: 1226 DPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYP 1285 P RDRA M +V+ +++ +P A + RWM+EELR+S FAQ L T P Sbjct: 1201 QPARDRAWMTEVQKATDLYREAGGVIPSAPHAPASLVHARWMLEELRLSLFAQHLPTAEP 1260 Query: 1286 ISDKRILQAM 1295 +S +RI + + Sbjct: 1261 VSLQRIRKVL 1270 >UniRef50_Q3JBJ6 ATP-dependent helicase HrpA n=3 Tax=Chromatiaceae RepID=Q3JBJ6_NITOC Length = 1281 Score = 1282 bits (3317), Expect = 0.0, Method: Compositional matrix adjust. Identities = 657/1294 (50%), Positives = 882/1294 (68%), Gaps = 28/1294 (2%) Query: 20 MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV 79 M RD+ R RRL + K + + + I+ + R++ P + +LPV Sbjct: 1 MQRDQHRLKRRLQRLTKGNS----SYNLGHLTQAIEDSRLWREQRQSQLPRPAFEQSLPV 56 Query: 80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA 139 +++++I AIR+HQVVI+ GETGSGKTTQLPKIC+ELGRG+ G+IGHTQPRR+AARTVA Sbjct: 57 IERREEIGAAIRNHQVVILCGETGSGKTTQLPKICLELGRGVAGMIGHTQPRRIAARTVA 116 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 NRIA+EL ++ G +GYKVRF D VS +T +KLMTDGILLAE Q DR L QYDT+IIDEA Sbjct: 117 NRIAKELNSDLGQIVGYKVRFHDQVSPSTYIKLMTDGILLAETQGDRFLDQYDTLIIDEA 176 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR 259 HERSLNIDFLLGYLK+LLP+RPDLK+IITSATID ERFS+HF APIIEVSGRTYPVE+R Sbjct: 177 HERSLNIDFLLGYLKQLLPKRPDLKVIITSATIDTERFSQHFGQAPIIEVSGRTYPVEIR 236 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTE 319 YRP+ E + ER+ + I DAVDELS+ GDIL+F+ GEREIR+TA+AL K + HTE Sbjct: 237 YRPLCGEQETQERNLSEGILDAVDELSRLGPGDILVFLPGEREIRETAEALRKHHPPHTE 296 Query: 320 ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK 379 ILPLYARLS++EQNRVF+ HSGRRIVLATNVAETSLTVPGI YV+DPG AR+SRYS R+K Sbjct: 297 ILPLYARLSSTEQNRVFKPHSGRRIVLATNVAETSLTVPGIHYVVDPGLARLSRYSVRSK 356 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ 439 VQRLPIE ISQ+SANQR GRCGRV+ G+CIRLYSE+DFL RPEFTDPE+LRTNLASVILQ Sbjct: 357 VQRLPIEKISQSSANQRAGRCGRVATGVCIRLYSEEDFLGRPEFTDPEVLRTNLASVILQ 416 Query: 440 MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD 499 M +L LG + FPF++ P + I DG+RLL ELGA+ A LTPLG++L++LP+D Sbjct: 417 MKSLQLGAVEDFPFLDPPLPKMINDGLRLLAELGAVD-----KAQNLTPLGQRLARLPID 471 Query: 500 PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV 559 PR+ RMVL + C+ E +II SALSIQDPRERP++ QQA+DE H RF D+ SDFL+++ Sbjct: 472 PRIGRMVLAGDEFHCLSEMLIIASALSIQDPRERPLEAQQAADEAHSRFQDERSDFLSYL 531 Query: 560 NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY 619 LW L Q+ LS N R CR +L+YLR+REW+DI+ QL+ + +G N AEY Sbjct: 532 KLWEDLHRQRARLSQNKLRAYCREHFLSYLRLREWRDIHQQLKLLATNIGFRPNQVAAEY 591 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL 679 IH ALLTGLL +I +K ++K Y GARN + IFPGS LFKK PKW+M AELVETSRL Sbjct: 592 GAIHRALLTGLLGNIAVK-SEKDHYLGARNIKLQIFPGSALFKKSPKWIMAAELVETSRL 650 Query: 680 WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ 739 + R A +I+PEW+E +A HL+KR+Y +PHWE+ V+A E++T+YGL ++ R+++Y Sbjct: 651 YARCAGKIEPEWLEALALHLVKRSYFDPHWEKRPAQVIAYERITLYGLTVIPKRRIHYGP 710 Query: 740 IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY 799 ++P RE+FIR ALV GD+ T+ FFR N KL AE+EELEHKSRRRD+L+D+++L++FY Sbjct: 711 VNPEEAREIFIREALVNGDYDTQAPFFRHNQKLIAEIEELEHKSRRRDVLIDEQSLYQFY 770 Query: 800 DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL 859 ++R+ V + F W ++ ++ P LL + L++ A++I+ + +P+ L L Sbjct: 771 EERLPAGVYNGAGFKKWRQQAEKKNPQLLFLSREELMRHDAKEITGVRFPDQMTVKGLPL 830 Query: 860 RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV 919 LSY FEPG ADGVT+ +PL +LNQ+E S F+W +PGL +E +I LIK+LPK +RRNFV Sbjct: 831 ALSYHFEPGHPADGVTLTVPLAVLNQLEASHFQWLVPGLLKEKIICLIKALPKGLRRNFV 890 Query: 920 PAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK 979 P P++AEA + + P + PLLD L R L+ MTGV + W +P HL++ FR+VD+K Sbjct: 891 PVPDFAEACIRALSPAQGPLLDRLARHLQSMTGVPLSATCWQEVDLPLHLQMNFRLVDEK 950 Query: 980 NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK 1039 +K+L GR L L+ K Q + + + + G+ W FG+LPE E +R K+K Sbjct: 951 DKELATGRDLAILQRQWASKAQRSFRGWDNSELTREGITQWDFGELPERIELERQGLKLK 1010 Query: 1040 AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF 1099 +PAL D +V++ + D+ ++ GLRRL +L + IKYL + LP K+ L++ Sbjct: 1011 GYPALQDTETAVSLVIMDSAEAAQEITHLGLRRLFMLALTQQIKYLRKNLPGIQKMCLHY 1070 Query: 1100 N-----PYG-------KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELND 1147 P+G L D I +D+ + PV E F A EK EL Sbjct: 1071 TSLPAMPWGDSAPSQSSCESLKDALIQGIIDRTFILDHPPVRNGEKFMARKEKGCGELMS 1130 Query: 1148 TVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLG 1207 T + + +E+ILT + ++LKG + + D+K Q+ LVY GF+ L Sbjct: 1131 TANEFCRLIEEILTEYHEVVRQLKGNLPFAWLNSIRDMKEQLTHLVYHGFINQTSPIWLI 1190 Query: 1208 DTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI--- 1264 RYL+ I+ RL KL +P RD+ + ++ + QA+Q+ ++ +ED V + Sbjct: 1191 HLPRYLKGIKLRLAKLQENPRRDQQRQAEITPLWQAYQK---RMEIQHQEDGVVPALETY 1247 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RWM+EE R+S FAQ+LGT P+S KR+ ++I Sbjct: 1248 RWMLEEYRISLFAQELGTKRPVSPKRLAAQWKEI 1281 >UniRef50_B2GLW1 ATP-dependent RNA helicase HrpA n=7 Tax=Bacteria RepID=B2GLW1_KOCRD Length = 1418 Score = 1258 bits (3256), Expect = 0.0, Method: Compositional matrix adjust. Identities = 675/1377 (49%), Positives = 874/1377 (63%), Gaps = 141/1377 (10%) Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V+ A P I YPDNLPVS +++DI+ AIR++QVV+VAGETGSGKTTQLPK+C+ELG G Sbjct: 43 VMTEPLATPRIVYPDNLPVSARREDIMSAIRENQVVVVAGETGSGKTTQLPKMCLELGLG 102 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 +GLIGHTQPRR+AAR+VA RIA EL G +GY+VRF+ V ++ +KLMTDGI+LA Sbjct: 103 ERGLIGHTQPRRIAARSVAERIAHELGERVGATVGYQVRFTSEVGRDSRIKLMTDGIMLA 162 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EI D L +Y+ IIIDEAHERSLNIDFLLGYL+ LLP+RPDLK++ITSATIDP+RF+ H Sbjct: 163 EISHDPTLSRYNAIIIDEAHERSLNIDFLLGYLRRLLPQRPDLKVVITSATIDPQRFAEH 222 Query: 241 FNN------------APIIEVSGRTYPVEVRYRPIVEEAD---------------DTERD 273 F AP+IEVSGRTYPVE+RYRP+ +E D +RD Sbjct: 223 FAQPDPEHPEAEPVPAPVIEVSGRTYPVEIRYRPLTQERSGDGGPDEEDTGDGLADEDRD 282 Query: 274 QLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLS 328 + A+ DAV ELS+E GDIL+F +GEREIRD DAL K+ +L T+ILPL+ RLS Sbjct: 283 PIDAVCDAVVELSREPRGDILVFFAGEREIRDAQDALQKVIDSHRSLAGTQILPLFGRLS 342 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 +EQNRVF S RRIVLATNVAETSLTVPGIKYV+DPGTARISRYS RTKVQRLPIE I Sbjct: 343 MAEQNRVFSQSSHRRIVLATNVAETSLTVPGIKYVVDPGTARISRYSARTKVQRLPIERI 402 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL--- 445 SQASA QR GR GR S+G+CIRLYSE+DF SRPEFTDPEILRTNLA+VILQM ++G+ Sbjct: 403 SQASAKQRSGRSGRTSDGVCIRLYSEEDFESRPEFTDPEILRTNLAAVILQMISVGVVRE 462 Query: 446 -GDIAAFPFVEAPDKRNIQDGVRLLEELGAITT-------DEQAS--------------- 482 GDI FPFV+ PD R ++DGV LL+ELGA+ D+ AS Sbjct: 463 PGDILDFPFVQKPDPRAVKDGVVLLQELGALRGPGASAEHDDAASPPARRSRGGRRGRGR 522 Query: 483 ----AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 LT G L+ LPVDPRL RM++EA + GC RE +++T+AL++QDPRERP++K+ Sbjct: 523 KGGARGPLTRTGEILAALPVDPRLGRMIVEADRRGCAREVLVLTAALTVQDPRERPLEKR 582 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 QA+DE H RF DK SDFL++ LW YL EQQ LSS+ FR+LCR +YLN+LR+REWQD+Y Sbjct: 583 QAADEFHARFKDKTSDFLSYGLLWQYLQEQQAELSSSQFRKLCRREYLNFLRIREWQDLY 642 Query: 599 TQLRQVVKELGIPVNSE-----PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 QLRQ+ ++ GI V A ++H +LL+GLLS+IG++D +EY GAR RF+ Sbjct: 643 AQLRQIARQSGIDVGGSREIDVAAHQDDVHKSLLSGLLSNIGVRDERSREYRGARGTRFA 702 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 IFPGS LFKK P W++ AELVETSRLW R A I PEW E +A L+KR+YSEPHW R++ Sbjct: 703 IFPGSALFKKSPDWIVSAELVETSRLWARTNAAIQPEWAEEIAPSLVKRSYSEPHWSRSR 762 Query: 714 GAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLR 773 GAVMA+EKVT+YGLP+V+ R V +S IDP L RELFIRHALVEGDWQTRH F + N K Sbjct: 763 GAVMASEKVTLYGLPLVSERPVLFSSIDPELSRELFIRHALVEGDWQTRHTFVKRNRKAL 822 Query: 774 AEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKS 833 AEVEELE++ RR+D+ VDD+ LF+FYD R+ +V+S RHFD+WWKK + LL+ Sbjct: 823 AEVEELENRMRRKDLRVDDQVLFDFYDARVPANVVSQRHFDAWWKKARHQDEHLLDLTPE 882 Query: 834 MLIKEGAEKISKLDYPNFWH----QGNLKLRLSYQFEPGAD-ADGVTVHIPLPLLNQVEE 888 LI A + +P WH +G+L L L Y+F PG D ADGVTV IP+ L+++ Sbjct: 883 DLIAPEAPALDTDSFPRSWHVHSPEGDLSLDLDYEFAPGTDTADGVTVRIPVLFLDRLAP 942 Query: 889 SGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK----PLELPLLDSLE 944 FEW IPGLR ELV ALIKSLPK VRRNFVPAP+ A A + R+ P LL++L Sbjct: 943 EQFEWHIPGLRVELVTALIKSLPKAVRRNFVPAPDTAAAAVRRLDEEFDPPSGSLLEALA 1002 Query: 945 RELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDL--------KDAL 996 LRRM G V D+H + +P HL++ F V D ++ L G L +L ++AL Sbjct: 1003 TVLRRMRGHPVQASDFHPETLPPHLRMRFEVRDARSAVLGRGDDLTELKQRLRPRVREAL 1062 Query: 997 ----------------------------------------------KGKVQETLSAVADD 1010 +G + A + Sbjct: 1063 AQSLGQAAAQLYDAAGTSASAASGGDDDAAPGSRRGRRSGRDDRKGRGSARPDERAASSA 1122 Query: 1011 GIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV---------DERDSVAIKLFDNPLE 1061 +E++ L W P S E V +P LV E V +++ +P E Sbjct: 1123 SLERTDLRAWPEPDPPRSVETTVAGQTVTGYPTLVAVAPEKPGSTEPPRVDLRILSDPEE 1182 Query: 1062 QKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLI 1121 Q+ A +G+ LL +PS +Y+ + L + +L NP+G V LI DC +D+L+ Sbjct: 1183 QRAAQRDGVIALLQRVLPSVHRYVVDHLSQRERLIFTQNPHGSVEALIHDCTGAAIDRLV 1242 Query: 1122 DANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALG 1181 + P +T F L E VRAEL DTV D+ V LT + KRLK + Sbjct: 1243 PHD--PPFTRAEFDRLAEHVRAELIDTVFDVTALVTTALTEATTVRKRLKKPGSLGAVPA 1300 Query: 1182 LSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQ 1241 +D+ Q+ L++ GFV G++ L RYL + RL+KL+ RD M V ++ Sbjct: 1301 FTDMAEQVDRLIHPGFVARTGWQALQHLPRYLAGVNARLDKLSGHLQRDAVAMQTVHELE 1360 Query: 1242 QAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 A++ ++ +PP ++EIRW +EELRVS+FAQ+LGT + +S+KR+ + + ++ Sbjct: 1361 AAYRAALDTVPPTVPTPAALREIRWDLEELRVSFFAQELGTAHTVSEKRLRKKLREL 1417 >UniRef50_D2NU22 HrpA-like helicase n=4 Tax=Bacteria RepID=D2NU22_9MICC Length = 1504 Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 676/1371 (49%), Positives = 878/1371 (64%), Gaps = 145/1371 (10%) Query: 69 PE-ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 PE ITYP+ LPVS+++ DI+ AIRD+QVVI+AGETGSGKTTQ+PK+C++LG G KGLIGH Sbjct: 130 PEVITYPEELPVSERRDDIMNAIRDNQVVIIAGETGSGKTTQIPKMCLDLGLGEKGLIGH 189 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAAR+VA RIAEEL + G +GY+VRF+ V +++ +KLMTDGILLAEIQ D+L Sbjct: 190 TQPRRLAARSVAERIAEELGQKIGETVGYQVRFTSEVGEHSAIKLMTDGILLAEIQNDKL 249 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA--- 244 L +Y T+IIDEAHERSLNIDF+LGYLK +LP+RPDLK+IITSATIDPERF+RHF+ + Sbjct: 250 LRRYSTLIIDEAHERSLNIDFILGYLKRILPQRPDLKVIITSATIDPERFARHFSPSYVP 309 Query: 245 --------------------------PIIEVSGRTYPVEVRYRPIVEE---ADDT---ER 272 PIIEVSGRTYPVE+RYRP+ EE +DD + Sbjct: 310 GKGIVDENLSAEEREIAEAILPDDAPPIIEVSGRTYPVEIRYRPLDEEDYLSDDEIEDDH 369 Query: 273 DQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR----HTEILPLYARLS 328 D I DA+ ELS+E+ GDILIF SGEREIRD DA+ + L+ + E+LPLYARLS Sbjct: 370 DPTDGILDAIKELSKEAPGDILIFFSGEREIRDAKDAIEAMVLKSPRLNYEVLPLYARLS 429 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 +EQ+RVF S RIVLATNVAETSLTVPGIKYVID GTARISRYS RTKVQRLPIE I Sbjct: 430 LAEQHRVFSPGSRPRIVLATNVAETSLTVPGIKYVIDTGTARISRYSARTKVQRLPIERI 489 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL--- 445 SQASANQR GRCGRVS+GI IRLYSE+DF SRPEFTDPEILRTNLA+VILQM A+G+ Sbjct: 490 SQASANQRSGRCGRVSDGIAIRLYSEEDFNSRPEFTDPEILRTNLAAVILQMIAIGVVRE 549 Query: 446 -GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA------SAYKLTPLGRQLSQLPV 498 GDI+ FPFV+ P R I DGV LL ELGA+T ++ ++ LT +GR ++ PV Sbjct: 550 PGDISRFPFVQPPASRAINDGVNLLRELGALTERPRSPRKGRGNSATLTAIGRAMAAFPV 609 Query: 499 DPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAF 558 DPRLARM++E + C +E M++ +AL+IQDPRERP D + +D H RF D SDF +F Sbjct: 610 DPRLARMIIEGGRRNCAKEMMVLAAALTIQDPRERPADVRAEADAMHVRFVDDTSDFSSF 669 Query: 559 VNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI------PV 612 + LW+Y+ EQQ ALSS+ R++C +Y+NYLR+REWQD++ QLR++ + I + Sbjct: 670 LLLWDYINEQQAALSSSQLRKMCHREYINYLRIREWQDLFAQLREMGRTANIHASGGRDI 729 Query: 613 NSEPAEYREIHIALLTGLLSHIGMKDADKQ----------EYTGARNARFSIFPGSGLFK 662 N+ E +IH +LL+GLLSH+G+K+ ++ EY GAR +F+IFPGSGLFK Sbjct: 730 NASAHEI-DIHKSLLSGLLSHVGVKEEREKDSKGRTRGPREYLGARGTKFAIFPGSGLFK 788 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKV 722 K P WV+ AELVETSRLW R A IDP+W+E + +HLI YSEPHW + GA +A K Sbjct: 789 KSPDWVLSAELVETSRLWARTNASIDPQWIEEIGKHLISVQYSEPHWSLSSGAAVAYAKG 848 Query: 723 TVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHK 782 T++GL I A R V Y+++D A RELFI+ ALVEG W T+H F+ N + AEVEELE + Sbjct: 849 TLFGLTIYADRPVQYARVDAAAARELFIQSALVEGQWHTQHKFYLRNQRALAEVEELEAR 908 Query: 783 SRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEK 842 RRRD+ VDD LF FYD RI V R FD WWK+ E + L+F LI E A Sbjct: 909 LRRRDLRVDDSVLFAFYDARIPAHVTDVRAFDKWWKQARLEDDNFLDFNPEKLINEEAAD 968 Query: 843 ISKLDYPNFWHQ----GNLKLRLSYQFEPGA-------DA---DGVTVHIPLPLLNQVEE 888 +P W Q G L L L Y++ P A DA DGV V +P+ LNQ+ Sbjct: 969 YDDSQFPRQWVQRTDSGELTLDLRYEYAPTAGVGGARTDAAKRDGVAVQVPILFLNQLSP 1028 Query: 889 SGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK----PLELPLLDSLE 944 F WQIPGLR ELV ALIKSLPK +RRNFVPAP+ A A ++ P LL SL Sbjct: 1029 EPFRWQIPGLRHELVTALIKSLPKAIRRNFVPAPDVARAACAALEEDYSPATDELLPSLA 1088 Query: 945 RELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETL 1004 LRR+ GV V+ E ++WD VP+HLK+ F+V + +NK L EG+ L+ L+ L +++ L Sbjct: 1089 LVLRRLRGVVVEPEAFNWDAVPEHLKMGFQVRNARNKILGEGKDLRALQQQLHKEIRSAL 1148 Query: 1005 S----------------------------------------------------AVADDGI 1012 + A A G+ Sbjct: 1149 ADSLGASDEAMAKMVALAQGGSGNSGGSGNSGGSARPGSAKGAKNPAKGTQAEAGASGGV 1208 Query: 1013 -EQSGL-----HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAM 1066 E +GL ++ G++P ++ V +PALVDE SV +++F EQ A Sbjct: 1209 REVTGLTAFPADLFPNGEIPRKVQRVIATQAVNGYPALVDEGSSVGLRIFPTEAEQLHAQ 1268 Query: 1067 WNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG 1126 G+ RLL L +PSP++Y+ E L +K K+ NP+G + ELI DC +D L+ Sbjct: 1269 RRGIIRLLQLQVPSPVRYVSEHLSHKEKIVFTQNPHGSIDELIRDCTVAALDHLVPHT-- 1326 Query: 1127 PVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIK 1186 P++T ++ L+E VRAEL +TV D+ K V +IL+ + K +K +T +SD+K Sbjct: 1327 PIFTHAAYSELYEHVRAELIETVFDVTKLVAEILSEATALKKAIKKATSLTTMHAVSDVK 1386 Query: 1187 AQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQ 1246 AQM LVY GFV G+ +L RYL+A + RL KL + HRD ML V++++ ++ Sbjct: 1387 AQMENLVYPGFVAQTGYDQLVHLPRYLKAAQVRLTKLGPNLHRDNQLMLTVQDLEDSYDN 1446 Query: 1247 WINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 + LP + ++ + WMIEELRVS+FAQ+LGT Y +S+KRI +A + Sbjct: 1447 AVKSLPAGTIVPDALRRVNWMIEELRVSFFAQELGTAYTVSEKRIAKAQRE 1497 >UniRef50_C8X757 ATP-dependent helicase HrpA n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X757_NAKMY Length = 1349 Score = 1240 bits (3209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 652/1341 (48%), Positives = 863/1341 (64%), Gaps = 58/1341 (4%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY 73 +RL L + DR R RL +++ +P + + E+ +++ A ++ R+AA P IT+ Sbjct: 13 ERLADLTIVDRRRLQGRLRSAERIPDPAKRDLVLAEIDHQLEAGAARLARRQAAVPTITF 72 Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 P LPVS + QD+ I +HQVVIVAGETGSGK+TQLPK+C++LGRG++G+IGHTQPRR+ Sbjct: 73 PAQLPVSARVQDLARTIAEHQVVIVAGETGSGKSTQLPKLCLQLGRGVRGMIGHTQPRRI 132 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AAR +A RIAEE T+ GG IGY +RF DH T+VKLMTDGILL EI +DR+L YDT Sbjct: 133 AARALAERIAEETGTQLGGAIGYSIRFGDHTGPTTLVKLMTDGILLTEIARDRMLWAYDT 192 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 IIIDEAHERSLNIDFLLGYL+ LLP+RPDLK+IITSATIDP +FSRHF +AP++EVSGRT Sbjct: 193 IIIDEAHERSLNIDFLLGYLQGLLPQRPDLKLIITSATIDPGKFSRHFADAPVVEVSGRT 252 Query: 254 YPVEVRYRP----IVEEADDTE----------RDQLQAIFDAVDELSQESHGDILIFMSG 299 +PVE+RYRP + E DD + DQ QAI AVDEL GDIL+F+SG Sbjct: 253 FPVEIRYRPYGLDALPEVDDPDAEQSRGSSESADQGQAITAAVDELLAAGDGDILVFLSG 312 Query: 300 EREIRDTADAL-NKLNLRH--TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 EREI DT + L L R TE+LPLY RLS+++Q++VF +H GRRIVL+TNVAETSLT Sbjct: 313 EREITDTTEVLRGHLAGRRGLTEVLPLYGRLSSADQHKVFSAHPGRRIVLSTNVAETSLT 372 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI+YVIDPGTARISRYS R+KVQRLPIEPISQASA QR GRCGRV+ GICIRLYSE D Sbjct: 373 VPGIRYVIDPGTARISRYSPRSKVQRLPIEPISQASAGQRAGRCGRVANGICIRLYSEKD 432 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F RP +TDPEI RT+LASVILQM AL LGDI FPF++ PD+R I DGV +L ELGAI Sbjct: 433 FDERPAYTDPEIARTSLASVILQMAALELGDIVDFPFLDPPDQRQITDGVTVLTELGAI- 491 Query: 477 TDEQAS-AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 D A +LTP GR+++ LP+DPRLARM++E ++ RE +++ SAL++ D RE P+ Sbjct: 492 -DRSAGDRVRLTPTGREMADLPLDPRLARMLVEGERRNVRREMLVLVSALAVIDVREYPL 550 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 D++ + H RF D SDF A ++LW YL EQ K S NAFRR+CR +YLNYLR+REWQ Sbjct: 551 DERDKATAAHARFVDGNSDFNALISLWAYLEEQAKTQSGNAFRRMCRREYLNYLRIREWQ 610 Query: 596 DIYTQLRQVVKEL------------------GIPVNSEP-------------AEYREIHI 624 D++ QL Q++ +P +P + +H Sbjct: 611 DLHAQLSQLLDGGRRRGGRRRPDRPAPADRGSLPQRRDPDATQGGRGSLAVDVDTERVHT 670 Query: 625 ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIA 684 ALL GLLSHIG++ +EY G R +SI+PGS L + P V+ AELVETSRLW RI Sbjct: 671 ALLAGLLSHIGLRKEGTREYQGTRGISYSIWPGSALARTGPVLVVAAELVETSRLWARIC 730 Query: 685 ARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPAL 744 AR++P WVE V L++R YSEP W + +V ATEKVT+ G+ ++AAR V + +IDP L Sbjct: 731 ARVEPGWVEQVGADLLRRNYSEPRWNGKRASVEATEKVTLLGVTLIAARTVQFDRIDPEL 790 Query: 745 CRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRIS 804 RELFIRHALVE DWQTRH FF +N + +V E E ++RRRDIL+DD+T+F YD RI Sbjct: 791 SRELFIRHALVERDWQTRHRFFADNQRALEQVTEWEERARRRDILIDDDTMFALYDARIP 850 Query: 805 HDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQ 864 V S RHFDSWWKK SR PDLL MLI GAE+ +P+ + G ++L L Y Sbjct: 851 PQVTSGRHFDSWWKKASRTQPDLLTLTPDMLIAAGAERFDSAAFPDRFTSGEVELPLDYV 910 Query: 865 FEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNY 924 F+PG DGVTV IPLP+L +V+ +GFE QIPGLR +L +ALI++LPK +RRNFVPAP++ Sbjct: 911 FDPGRADDGVTVSIPLPVLARVDPAGFEAQIPGLRADLAVALIRTLPKTLRRNFVPAPDF 970 Query: 925 AEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLK 984 A A L R+ PL + L L RMTGV V D+ D+VP+HL++ FR+VD+ + Sbjct: 971 ARAALDRIDAAR-PLAEELAGALTRMTGVVVRTADFDPDKVPEHLRMNFRIVDEHGATVA 1029 Query: 985 EGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPAL 1044 GR L L+ L+ Q + A +E+ GL + +P + ++V +PAL Sbjct: 1030 SGRDLPTLQSTLRTDTQRAV-VQATKSLERHGLTAFPEPGVPRRVRARVAGHEVTGYPAL 1088 Query: 1045 VDER-DSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 V E +V + +FD+ +Q++AM G LL + + + + L + ++ L P Sbjct: 1089 VVEGPGTVGVAVFDSEADQRRAMRAGTIELLAAALTPSLTRVRQLLTREQQITLATAPGT 1148 Query: 1104 KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 + L+ D VD L+D GGP W+ GFAA+ K+ + +V D+ E +L+A Sbjct: 1149 TIPTLVADATRAAVDALLDWAGGPSWSAAGFAAVRTKLTPSMLTSVRDVLAAAETVLSAA 1208 Query: 1164 FNINKRL----KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR 1219 + L +G +A D++AQ V GF+ G L D R LQA+ R Sbjct: 1209 GAAARALDTAERGPGAAAVADLTRDMRAQWRAAVAPGFIVATGAAGLPDRARQLQALRIR 1268 Query: 1220 LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ 1279 E++ RDR ++ ++ +Q + + +LP RR D DV+ + ++ E RV+ FAQ Sbjct: 1269 AERVREAAGRDRERLAEIRELQAEVDRAVEELPEERRSDPDVQALHHLLAEYRVALFAQP 1328 Query: 1280 LGTPYPISDKRILQAMEQISG 1300 + T P+S KRI A + G Sbjct: 1329 MRTSVPVSAKRIRSAAAALGG 1349 >UniRef50_A1U107 ATP-dependent helicase HrpA n=4 Tax=Gammaproteobacteria RepID=A1U107_MARAV Length = 1312 Score = 1239 bits (3206), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/1293 (48%), Positives = 877/1293 (67%), Gaps = 26/1293 (2%) Query: 11 ALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 A+ +LD+ ++ R RR+ K NP + ++MA+ +DQ KV R+A Sbjct: 25 AMMNQLDACNQQEVARIIRRVSRCKG--NPGNKD--LEKMAQWLDQGLDKVRKRQALHKP 80 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 T+P LPVS + +DI +AI +HQVVI+AGETGSGKTTQ+PKIC+ LGRGI+G+IGHTQP Sbjct: 81 ATFPAGLPVSDRVEDISDAINNHQVVIIAGETGSGKTTQIPKICLNLGRGIRGIIGHTQP 140 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+V++RIAEEL G IGY+VRF+D+ S+++ VK+MTDGILLAE+Q DR L + Sbjct: 141 RRIAARSVSSRIAEELGETVGQQIGYQVRFTDNTSESSRVKVMTDGILLAEVQHDRFLDR 200 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDT+IIDEAHERSLNIDFLLGYLK+LLP+RPDLK+IITSATI+ ERFS FN AP+IEVS Sbjct: 201 YDTLIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSATIEVERFSEFFNEAPVIEVS 260 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH------GDILIFMSGEREIR 304 GRT+PV++RYRP+V + DD ++ + A+DE+ Q GD+L+F+ GEREIR Sbjct: 261 GRTFPVDIRYRPLVGDEDDRDQGWTDGVLSALDEIEQHERQEKQPPGDVLVFLPGEREIR 320 Query: 305 DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVI 364 + L +LRHTE+LPLY+RLSN EQNRVFQ H GRRIVL+TNVAETSLTVPGI+YVI Sbjct: 321 ALSKVLRHADLRHTEVLPLYSRLSNQEQNRVFQGHKGRRIVLSTNVAETSLTVPGIRYVI 380 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G ARISRYS R+K+QRLPIEPISQASANQR GRCGRV+ GIC RLY E DFL+RPE+T Sbjct: 381 DTGVARISRYSVRSKIQRLPIEPISQASANQRAGRCGRVAPGICFRLYDETDFLNRPEYT 440 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 DPEILRTNLASVILQM GLG+I FPF+EAPD+R + DG +LLEEL A+ Sbjct: 441 DPEILRTNLASVILQMATSGLGEIRHFPFLEAPDRRQVNDGYKLLEELSAVDDKR----- 495 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 ++T LGR +++LP+DPRLARM++ + + G + E +I+ + LS+QDPRERP DKQQA+D+ Sbjct: 496 RVTRLGRTMARLPLDPRLARMLVTSAEQGSLAEVLIVIAGLSVQDPRERPQDKQQAADQA 555 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H F+DKESDF +N+WN+ EQ++ LS N ++LC+ +L+++R+REW+DI+ QL + Sbjct: 556 HAPFNDKESDFATLLNIWNWFEEQRQELSQNQLKKLCQKTFLSWMRMREWRDIHRQLTLI 615 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 +E + +NS+PA Y +H A+L GLL + +K +K+EY RN + IFPGS + K Sbjct: 616 CREQKLTLNSQPANYDAVHKAILGGLLGQVAVK-VEKREYLATRNRKVMIFPGSKVGKTA 674 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTV 724 PKW++ AE+VETS+++ R+ A I PEWVEP+A H++K Y EPHWE+ + VM EKVT+ Sbjct: 675 PKWIVAAEIVETSKVFARMVAAIQPEWVEPLAGHVVKHHYFEPHWEQKRAQVMGYEKVTL 734 Query: 725 YGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSR 784 YGL +V R++ Y+++DPA CR LFIR ALVEGD+Q+R F N ++ VE LE K+R Sbjct: 735 YGLDVVPKRRIPYAKVDPAECRNLFIRRALVEGDFQSRAPFIARNREMLDTVENLEKKTR 794 Query: 785 RRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKIS 844 RRD+LVDDE L FYDQR+ D++S RHF+SWWK +S E L ++ +++ ++ S Sbjct: 795 RRDLLVDDEVLVAFYDQRLPSDIVSGRHFESWWKGLSAEELKKLELTETDVLQRPLDETS 854 Query: 845 KLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVI 904 YP++ +K LSY+FEP ++ DGVT+++PL L Q+ EW +PGL RE I Sbjct: 855 AQQYPDYLEWEGVKYPLSYEFEPTSERDGVTLNVPLMALRQIPARRLEWLVPGLLREKCI 914 Query: 905 ALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQ 964 AL+K LPK +RRNFVP P++ +A L ++P PL L +LRRMTGV +D + W ++ Sbjct: 915 ALVKGLPKALRRNFVPVPDFVDAALANLQPGNEPLAIKLGEQLRRMTGVQIDPDAWPEEE 974 Query: 965 VPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADD--GIEQSGLHI-WS 1021 +P HL++ RV DK K + E R +L+ L+G+ +E L++ D G +Q+G + W Sbjct: 975 LPRHLRMNLRVTGDKGKVIAESRDTDELQARLEGRAEEALASATRDEPGKKQAGEYTDWQ 1034 Query: 1022 FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSP 1081 FG PE + ++G +V +PAL D + V + L + G+ RL++ + Sbjct: 1035 FGTFPEQVQTEKGGMQVTVYPALEDLGNKVRASRCLDKLTAEDTHRRGVARLIVNRFGNT 1094 Query: 1082 IKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKV 1141 + L KLP + L F P G+ L+DD + V + A+ P TE+ FA L ++ Sbjct: 1095 LADLERKLPRFKQSALMFAPIGQAKGLLDDLVLSTVMQHFLADQLPR-TEQAFAELFDRH 1153 Query: 1142 RAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGN 1201 R + + +++ Q + + K+LKG++++ +A ++D+K Q+ LV GF+ Sbjct: 1154 RGDFIPALEAADERLFQAMNGYQKVAKQLKGKINLALAASMADLKFQLQHLVSPGFLVNT 1213 Query: 1202 GFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE---D 1258 + L Y +A + RLEK+A + R+R + +E + W ++ KL +R+ D Sbjct: 1214 PVQWLERFGTYFEAADIRLEKMAREMGREREFLHTIEPL---WARYAAKLEQQKRQGVRD 1270 Query: 1259 EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +++ RWM+EE RVS+FAQQLGT +S KR+ Sbjct: 1271 PELETYRWMMEEFRVSFFAQQLGTVMTVSAKRL 1303 >UniRef50_Q1N0P2 ATP-dependent helicase HrpA n=1 Tax=Bermanella marisrubri RepID=Q1N0P2_9GAMM Length = 1298 Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/1296 (48%), Positives = 886/1296 (68%), Gaps = 35/1296 (2%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAI---FQEMAKEIDQAAGKVLLREAAR 68 L +++D ++RDR F +++ +KK ++Q I F+++A+++ ++ V RE Sbjct: 7 LAKQIDETLIRDRHGFRKQVGYLKK--RLQSKQPIDKGFEKLAQQMQKSIDIVSHREQDC 64 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P + + D LP++QKKQ+I E I ++QVV++AGETGSGKTTQLPKICMELG G I HT Sbjct: 65 PRLEFDDQLPINQKKQEIAETIANNQVVVIAGETGSGKTTQLPKICMELGLAKYGKIAHT 124 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRRLAAR+VA+RIA+E G +GY+VRF+D D++++KLMTDGILLAE Q DR L Sbjct: 125 QPRRLAARSVADRIAQECNVPLGEQVGYQVRFTDQSKDSSLLKLMTDGILLAETQNDRFL 184 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 QY IIIDEAHERSLNIDFLLGYLK+LLP+RPDLK++ITSATID +RFS HF+NAP+IE Sbjct: 185 NQYQVIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVVITSATIDLQRFSEHFDNAPVIE 244 Query: 249 VSGRTYPVEVRYRPI--VEEADDTERDQLQAIFDAVDELSQESH-----GDILIFMSGER 301 VSGRTYPVEVRYRPI V+ D+ E D Q I DAVDEL +E GD+L+F+SGER Sbjct: 245 VSGRTYPVEVRYRPIVDVDTDDEQEGDMYQGIIDAVDELEREDAKRGQIGDVLVFLSGER 304 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGI 360 EIR+ + AL K NL+ TEILPLYARL++SEQ R+F+ G RRIVL+TNVAETSLTVPGI Sbjct: 305 EIREASLALKKANLKQTEILPLYARLNSSEQQRIFKPTGGKRRIVLSTNVAETSLTVPGI 364 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 +YV+D G AR+SRYSYR+KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE+DFLSR Sbjct: 365 RYVVDTGVARVSRYSYRSKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFLSR 424 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 PEF+DPEI RTNLA+VILQM +L LGD+ AFPFV+APD R I+DG LL+EL A+ Sbjct: 425 PEFSDPEIQRTNLAAVILQMLSLRLGDVNAFPFVDAPDNRFIKDGYNLLKELSAVDKKN- 483 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 +T +GRQLS+ PVDPR+AR+++EA + EA+II SALSIQDPRERP++KQQ Sbjct: 484 ----NITRIGRQLSRFPVDPRIARVLIEANAKHALAEALIIASALSIQDPRERPVEKQQQ 539 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +D+KH F D ESDF+ +N+WN+ EQ++ALS+N R++C+ +LNY+R+REW+D++ Q Sbjct: 540 ADQKHAEFRDDESDFITLINIWNWYEEQRQALSNNQLRQICKKHFLNYMRMREWRDVHYQ 599 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 LR + KEL N E + Y ++H +L+G LSHIG K +D+ +Y GARN RF +FPGSG+ Sbjct: 600 LRILCKELKFVENKEVSSYDQLHKCILSGYLSHIGQK-SDENDYKGARNRRFLLFPGSGI 658 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 FKK PKWV+ AELVETS+L+GR+ A I PEW+EP+A++L+K+TY EPHW +G VMA E Sbjct: 659 FKKRPKWVVSAELVETSKLYGRMNATIQPEWLEPLAKNLVKKTYLEPHWSIKRGQVMAYE 718 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +V+++GL I+ R++ Y+QIDP + E+FIR ALV+G +T+ F N L EV ELE Sbjct: 719 QVSLFGLIIIPRRRIGYAQIDPVVSHEIFIREALVQGQIKTQGDFLEYNQALMEEVAELE 778 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 KSRRRDI++D+E LF+FY +R+ D+ F+ W KK +T L EKS L++ A Sbjct: 779 DKSRRRDIVIDEERLFQFYFERVPDDIADTASFEKWRKKNGDDT---LLIEKSYLMQHAA 835 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 +++ +P+ + G++ LSY+FEPG DGV+V +P P+L Q+ EW +PG+ R Sbjct: 836 SDVTEAQFPDHFSHGSVIYPLSYRFEPGHAEDGVSVMVPAPILKQLPVGRLEWLVPGMIR 895 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 + VIAL+K+LPKP+R+ VP P++A+ FL + + LL + + + + V +D+ Sbjct: 896 DKVIALLKALPKPIRKQLVPVPDFADGFLSQQPNRDQSLLAEICAYVYQQKRIKVSADDF 955 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 + + DH ++ +V+ ++ L +GR Q L D + G V E SA ++ IE+ G+ W Sbjct: 956 NIASIDDHYRMNIKVIGAEDDLLAQGRDWQKLLDEV-GDVAEQFSADEENDIERQGITQW 1014 Query: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 F +LP Y+ + +V +PAL+D++ SV IKL D EQ G+ RLL L + Sbjct: 1015 DFNELPLEYQLTQAGIQVTLYPALIDQQTSVDIKLLDRADEQAVQTRKGILRLLQLELKD 1074 Query: 1081 PIKYLHEKLPNK-AKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVW-----TEEGF 1134 + +H+ + + + +Y++ G EL++ + + + AN W T + Sbjct: 1075 QVSVIHKSVQKQLVQEIIYYSQLGNKTELLE-----SITRQVFANSF-CWQDNPHTHSDY 1128 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 + ++ RA + + + +I + IL +NK LK + A +SDIK Q+ L+ Sbjct: 1129 IKVKDEGRANIGECLDEILPITKDILKQYHELNKALKKHNQLAFAFAVSDIKHQIQALMP 1188 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPA 1254 +GF+ + L RY++++ +RL KL + +D+ Q LKV + +Q+ ++ LP + Sbjct: 1189 KGFLGFVPLEWLKHYPRYIKSMIQRLTKLQGNVQKDKLQQLKVSAWNEEYQKLLSDLPAS 1248 Query: 1255 RREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKR 1290 +V + WMI+E RVS FAQ+LGT P+SDKR Sbjct: 1249 LDCYPEVLTLNWMIQEYRVSLFAQELGTVIPVSDKR 1284 >UniRef50_A6WCM9 ATP-dependent helicase HrpA n=5 Tax=Bacteria RepID=A6WCM9_KINRD Length = 1388 Score = 1227 bits (3175), Expect = 0.0, Method: Compositional matrix adjust. Identities = 668/1329 (50%), Positives = 896/1329 (67%), Gaps = 85/1329 (6%) Query: 47 FQEMAKEIDQ----AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET 102 F+E ++Q A +V R A+ P + YP+ LPVSQ+K I A+RDHQV++VAGET Sbjct: 67 FEEELPALEQQTVAAEQRVTARAASVPALRYPEQLPVSQEKDRIAAALRDHQVIVVAGET 126 Query: 103 GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSD 162 GSGKTTQLPKIC+E+GRG++G IGHTQPRR+AAR VA R+AEEL TE GG +GY VRF+D Sbjct: 127 GSGKTTQLPKICLEIGRGLRGRIGHTQPRRIAARAVAERVAEELGTELGGSVGYAVRFTD 186 Query: 163 HVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD 222 V ++++VK+MTDGILLAEIQ+D L+QYDT+IIDEAHERSL IDFLLGYL LLPRRP+ Sbjct: 187 TVGEDSLVKVMTDGILLAEIQRDPELLQYDTLIIDEAHERSLTIDFLLGYLARLLPRRPE 246 Query: 223 LKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP-------------------- 262 LK++ITSATIDPERFSRHF API+EVSGRTYPVEVRYRP Sbjct: 247 LKLVITSATIDPERFSRHFGGAPILEVSGRTYPVEVRYRPLLAAELAEELLGPADEEEGD 306 Query: 263 IVEEADD---TERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL----NL 315 ++E DD +RDQ + I DAV EL+ E GD+L+F+ GEREIRDTADAL L Sbjct: 307 ALDERDDLVGDDRDQTEGILDAVRELAAEGPGDVLVFLPGEREIRDTADALADLVKERGF 366 Query: 316 RHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 R TEILPL+ARLS EQ+RVF++ + RRIVLATNVAETSLTVPGI+YV+D GTARISRYS Sbjct: 367 RGTEILPLFARLSAEEQHRVFRTAAHRRIVLATNVAETSLTVPGIRYVVDAGTARISRYS 426 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLAS 435 +RTKVQRLPIE ISQASANQR GRCGRV++GICIRLYS+ DF SRPEFTDPEILRTNLA+ Sbjct: 427 HRTKVQRLPIERISQASANQRAGRCGRVADGICIRLYSQSDFESRPEFTDPEILRTNLAA 486 Query: 436 VILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA--SAYKLTPLGRQL 493 VILQMT+LGLGDIAAFPFVE P+ R I DG+ LL ELGA+ +LTP GR L Sbjct: 487 VILQMTSLGLGDIAAFPFVEPPEPRAITDGLALLAELGALEDARPGDRGVPRLTPTGRDL 546 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKES 553 ++LP+DPRL RMVLEAQ++GC+ + +++ +ALS+QDPRERP++K++ + + H RF ++S Sbjct: 547 ARLPIDPRLGRMVLEAQRNGCLHDVLVVVAALSVQDPRERPLEKREQAAQLHARFRHEQS 606 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613 DFL ++NLW+YL Q+ LSS+AFRR + + L++LR+REWQD Y+QLR+V ++L V Sbjct: 607 DFLTYLNLWSYLQHLQRDLSSSAFRRRVKAEMLHFLRIREWQDTYSQLRRVTRDLRFSVE 666 Query: 614 -SEPAEYRE-------------IHIALLTGLLSHIGMKDADKQ----------------- 642 EPAE E +H +LL GLL +IG+KD + Sbjct: 667 VREPAELGEDELFPAPGYDADAVHRSLLAGLLGNIGLKDVREDTAKAGARTGGRRESRPT 726 Query: 643 -----EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 EYTGAR A+F++ PGS L ++ P WV+ ELVETSRLW R+ A IDP W+EP+A Sbjct: 727 GRQQVEYTGARGAKFAVSPGSSLGRRSPDWVVAGELVETSRLWARVVAAIDPRWIEPLAA 786 Query: 698 HLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEG 757 H+++R+YSEP W R + AV+ATE+VT+YG+PIVA R V Y +DP L R+LFIRHALVEG Sbjct: 787 HVVRRSYSEPRWSRKRAAVIATERVTLYGVPIVAGRSVPYGGVDPELARDLFIRHALVEG 846 Query: 758 DWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWW 817 D++TRH FF N +L AE EELEH++RRRDI+VDDE LF FYD R+ DV+S RHFD+WW Sbjct: 847 DFETRHEFFHRNRELLAEAEELEHRARRRDIVVDDEVLFAFYDARVPADVVSGRHFDAWW 906 Query: 818 KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVH 877 K R PDLL F+ +ML+ E + +S+ +P W QG+L+L L Y F+PG+ ADG+TV Sbjct: 907 KDERRVRPDLLTFDPAMLVTED-DAVSEEQFPRVWRQGDLELALDYVFDPGSPADGLTVD 965 Query: 878 IPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL 937 +P+ ++N+ ++ WQ+PG R +LV A+I++LPK +R+N PAP+ A FL RV+P Sbjct: 966 VPVEVVNRFDDRDLLWQVPGFRHDLVTAMIRALPKELRKNLAPAPDKAARFLERVRPHVD 1025 Query: 938 PLLDSLERELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 + E E+ R+ G + ED W +VP HL+ TFRV+ L G+ L+ +L Sbjct: 1026 RFWPAFEAEMPRLGDGTEIYAEDVDWTKVPAHLRPTFRVLAGDGSVLATGKDFPRLRASL 1085 Query: 997 KGKVQETLSAVADDGIEQSGLHIWS--FGQLPESYEQKRGNYKVKAWPALVDERDSVAIK 1054 + V ETL+A ADD ++++G W+ ++P ++ V ++PALVDE +V ++ Sbjct: 1086 ETAVVETLAAAADD-VQRTGATSWADLPEEVPPTHTSVVRGSDVTSYPALVDEGTTVGLR 1144 Query: 1055 LFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV-LELIDDCI 1113 F + A G+ RLL+L +PSP + + + L N AKL L P+ + D Sbjct: 1145 TFPDAARAAVAHREGVLRLLVLALPSPARRVQDALTNDAKLLLARAPHADAGAVVADCAQ 1204 Query: 1114 SCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGR 1173 + L +A GG V T F L E+V D ++ ++L + K + Sbjct: 1205 AAAAQLLDEARGGEVRTAGEFRRLLERVSPRYADLTATAVERTLRVLRTAAAVEKNISRT 1264 Query: 1174 VDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 + + L+D++ Q GLV+ GFV G +RL D LRYLQ I++RL + +P RDR + Sbjct: 1265 SSLALVPSLADVREQFTGLVHAGFVAETGVERLPDLLRYLQGIDRRLATMPENPQRDRVR 1324 Query: 1234 MLKVENVQQAWQQWINK----LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDK 1289 M + V++ ++ + + +PP ++ IRW +EELR+ FA + T +P+SD+ Sbjct: 1325 MAEFARVREEHRKRLARAGSPVPP------ELARIRWTLEELRLQKFAPGIPTAHPVSDE 1378 Query: 1290 RILQAMEQI 1298 R+L+A+ + Sbjct: 1379 RVLKALAEF 1387 >UniRef50_Q21LQ8 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=Q21LQ8_SACD2 Length = 1296 Score = 1227 bits (3174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 629/1272 (49%), Positives = 871/1272 (68%), Gaps = 31/1272 (2%) Query: 34 VKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDH 93 + ++K + +++AK+I+QA + R+AA P I++P+ LP+S+K+ DI E I ++ Sbjct: 33 IARIKREQPVDKLVEQLAKDIEQAQAVLAARKAAVPAISFPEQLPISEKRADIAELIANN 92 Query: 94 QVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGC 153 QVVI+AGETGSGKTTQLPKIC+ELGRGI+GLIGHTQPRR+AARTVA+RIA+EL+ G Sbjct: 93 QVVILAGETGSGKTTQLPKICLELGRGIRGLIGHTQPRRIAARTVADRIAQELQVPLGDA 152 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY+VRF+DHV+D+T++KLMTDGILLAEIQQD LL++YDT+IIDEAHERSLNIDFLLGYL Sbjct: 153 VGYQVRFTDHVTDSTLIKLMTDGILLAEIQQDPLLLKYDTLIIDEAHERSLNIDFLLGYL 212 Query: 214 KELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 K++L +RPDLK+I+TSATID +RFS+HFNNAP+IEVSGRTYPVEV YRP +E +D Sbjct: 213 KQILAKRPDLKLIVTSATIDLDRFSKHFNNAPVIEVSGRTYPVEVLYRPWHDEFEDLT-- 270 Query: 274 QLQAIFDAVDE---LSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNS 330 QAI +AV+E +S+ GD+L+F+SGER+IR+ + AL K NL H EI+PLYARLS Sbjct: 271 --QAIVNAVEEIQSISKGRGGDVLVFLSGERDIREASHALKKANLPHWEIVPLYARLSLE 328 Query: 331 EQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 EQNRVF H GRR+VLATNVAETSLTVPGI+YVIDPGTARI RYS RTKV+RLP+E ISQ Sbjct: 329 EQNRVFSPHKGRRVVLATNVAETSLTVPGIRYVIDPGTARIKRYSLRTKVERLPVENISQ 388 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA 450 ASANQRKGRCGRVS+G+CIRLY +DF SR EFTDPEILR+NLA+VILQM + +GD+ Sbjct: 389 ASANQRKGRCGRVSDGVCIRLYDREDFESRSEFTDPEILRSNLAAVILQMLQMRIGDVRK 448 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQ 510 FPFV+ PD R I DG +LLEELGA+ + ++T LGR L QLP+DP+ RM++ A Sbjct: 449 FPFVDKPDNRLINDGFKLLEELGAVD-----KSNRVTKLGRDLQQLPLDPKFGRMIVAAA 503 Query: 511 KHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQK 570 + GC+RE +II S L+IQDPRERP DKQQA+DEKHRRF D++SDFL+ VNLW+Y+ EQ++ Sbjct: 504 EQGCLRELLIIVSGLTIQDPRERPADKQQAADEKHRRFWDEKSDFLSLVNLWHYVEEQRQ 563 Query: 571 ALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGL 630 LS N R+LC+ ++LN++R+REW++++ QLR +K++G N EPA Y +H ALLTGL Sbjct: 564 ELSQNQLRKLCQKEFLNFMRLREWRELHHQLRVTIKKMGFKENQEPASYDVVHEALLTGL 623 Query: 631 LSHIGMKD--ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688 LS++G K+ D ++Y G RN +F IFPGS L KK PKW+ AE++ETS+++ A+++ Sbjct: 624 LSNMGNKNEEPDARDYRGTRNRKFMIFPGSALRKKRPKWLFAAEMIETSQVYAHCVAQME 683 Query: 689 PEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCREL 748 PEW HL+K Y EPH+++ G V A +++++GL ++ ++V YS+IDPA RE+ Sbjct: 684 PEWALKSGAHLLKYNYFEPHYDKRAGQVKAFVRISLFGLVLIEKKRVGYSKIDPAEAREV 743 Query: 749 FIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVI 808 FIR ALVEG ++ + AFF +N L AEVE+LE KSRR+DI+VDDE LF FY++ I D+ Sbjct: 744 FIRAALVEGQYRGKGAFFNKNNALIAEVEDLEAKSRRKDIMVDDEVLFNFYNEIIPPDIC 803 Query: 809 SARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPG 868 + F+ W KK+ PD L + +L+ GAE +++ +P+ + L +SY FEPG Sbjct: 804 NLAGFEHWRKKLEETQPDALLLSRDLLMLHGAEGVTEAQFPDQLDFDGVTLPVSYHFEPG 863 Query: 869 ADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAF 928 DGV+V +P+ LL+ + + W +PGL R+ IAL+K+LPK R+ VP P + + Sbjct: 864 HPQDGVSVKVPVTLLHMLSDLYLPWLVPGLLRDKCIALVKALPKAKRKKVVPVPQFVDRA 923 Query: 929 LGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRS 988 + R+ + L ++L REL+R+ + + +DW + + VVD K L +GR Sbjct: 924 MARMTRSKASLTEALTRELKRLADIELTEDDWDETALEPFYHMNVIVVDAAGKPLDQGRD 983 Query: 989 LQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDER 1048 L L++ +G VQE+L + A EQ+ L W+F LPE+ + +G V+ +PAL D+ Sbjct: 984 LNALRERYRGHVQESLQS-AGSSFEQTELTGWTFESLPETVDLDKGGVTVRGFPALQDDT 1042 Query: 1049 DSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLEL 1108 SV++++ DNP E QA GL RL L + ++YL ++L +GL GK ++ Sbjct: 1043 SSVSLRVLDNPAEAYQASLAGLARLACLQLGQSVRYLQKQLLKGKDIGLTMVDLGKRDQV 1102 Query: 1109 IDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVE----QILTAVF 1164 +DD + V + + T F + EL V IA++ E IL V Sbjct: 1103 VDDILMAAVYRACFLDKPFPRTATEFKQCVDAGAGEL----VSIAQEYETLLLDILKYVV 1158 Query: 1165 NINKRLKG-RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 I K +K + +AL DI Q+ L+Y+GF+ + L RYL AIE R+EK Sbjct: 1159 AIKKAMKSNKSAFALALAFGDINQQLAQLIYKGFMFATPVQWLKQYPRYLNAIEVRIEKA 1218 Query: 1224 AVDPHRDRAQMLKVENVQQAWQQWINKL----PPARREDEDVKEIRWMIEELRVSYFAQQ 1279 A +P +DR + ++ + WQ+ ++L + ++ +E RWM+EELRVS FAQ Sbjct: 1219 AQNPQKDRVAIAELIGL---WQKHQDRLLKEGSHSYIQNTAWQEYRWMLEELRVSLFAQT 1275 Query: 1280 LGTPYPISDKRI 1291 L T P+S KR+ Sbjct: 1276 LKTLMPVSAKRL 1287 >UniRef50_Q1QXI6 ATP-dependent helicase HrpA n=17 Tax=Gammaproteobacteria RepID=Q1QXI6_CHRSD Length = 1325 Score = 1220 bits (3157), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/1321 (50%), Positives = 878/1321 (66%), Gaps = 44/1321 (3%) Query: 12 LQQRLDSLMLRDRLRFSRRL---HGVKKVKNP--DAQQAIFQEMAKEIDQAAGKVLLREA 66 L+ +LD +LRD RRL +G + P + + I +A+ +Q A R A Sbjct: 16 LRAQLDDCLLRDAHEQGRRLAKLNGRARSGKPIDRSLRDIEARLARSREQLAA----RRA 71 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 + YPD+LPV ++++D+L A+ HQVV+VAGETGSGKTTQLPK+C+ELG G +GLIG Sbjct: 72 QPLTLRYPDDLPVVERREDLLAALDAHQVVVVAGETGSGKTTQLPKLCLELGLGRRGLIG 131 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRRLAARTVA R+AEEL G +GY+VRF+D + T+VKLMTDGILLAE Q D Sbjct: 132 HTQPRRLAARTVATRLAEELDVPLGAQVGYQVRFTDQTDERTLVKLMTDGILLAETQNDP 191 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--- 243 LM+Y+ IIIDEAHERSLNIDFLLGYLK L RRPDLKIIITSATID ERFS HF Sbjct: 192 DLMRYEAIIIDEAHERSLNIDFLLGYLKRLTERRPDLKIIITSATIDVERFSHHFGRDGK 251 Query: 244 -APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQ--------ESHGDI 293 AP++EVSGRTYPV+V YRP+V +ADD E LQ I AV+E+ D+ Sbjct: 252 PAPVVEVSGRTYPVDVFYRPLVRDADDEEDRTLQEGILHAVEEVETIERERRWYSGPRDV 311 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 LIF+ GEREIR+TAD L + +L+ TEILPLYARLSN+EQNRVFQ H+GRRIVLATNVAET Sbjct: 312 LIFLPGEREIRETADTLRRADLKGTEILPLYARLSNAEQNRVFQPHAGRRIVLATNVAET 371 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLTVPGI+YVIDPG R+SRYSYR KVQRLPIEPISQASA+QRKGRCGR+SEG+CIRLYS Sbjct: 372 SLTVPGIRYVIDPGLVRMSRYSYRAKVQRLPIEPISQASADQRKGRCGRISEGVCIRLYS 431 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E+DFL+RP +T+PEI RTNLASVIL M AL LGDI AFPFV+ PD R I+DG RLL ELG Sbjct: 432 EEDFLARPTYTEPEIQRTNLASVILSMLALKLGDIEAFPFVDVPDSRFIKDGYRLLYELG 491 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ D +L+ LGR++++LP+DPRLARM L + G +RE +I+ SALS QDPR+R Sbjct: 492 AVGADN-----RLSELGRRVARLPIDPRLARMALAGAEQGSLRETLIVVSALSTQDPRDR 546 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P DK+QA+DEKHR++ D ESDF+A++NLW+ + + ++ LS N RR CR +YL+YLR+RE Sbjct: 547 PADKRQAADEKHRQWQDPESDFMAWLNLWHGVEQARETLSGNQLRRWCRDNYLSYLRLRE 606 Query: 594 WQDIYTQLRQVVKELGI--------PVNSEPAEYR------EIHIALLTGLLSHIGMKDA 639 W D + QL+Q+ +++G+ P + A R +H ALL+GLLSH+G Sbjct: 607 WHDTFRQLKQLTRDMGLEPSSAVLPPKEDDAASARPRVDGERLHKALLSGLLSHLGTLQE 666 Query: 640 DKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 ++ EY GA N +F I PGSGL KK PKWVM ELVETSRL+ R ARI P WVEP+A HL Sbjct: 667 NR-EYLGAHNRKFMIHPGSGLAKKTPKWVMAGELVETSRLYARDVARIQPAWVEPMASHL 725 Query: 700 IKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDW 759 +KR+YSEPHWE +G V+A E+VT++GLPIV R+++Y+++ P RELFIR ALVEG++ Sbjct: 726 VKRSYSEPHWEMKRGQVVAFEQVTLFGLPIVTGRRIDYAKVAPEEARELFIRRALVEGEY 785 Query: 760 QTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK 819 +T+ AFF+ N L +VEELE + R+RDILVD+ETLF FYD R+ DV AR F+ W K+ Sbjct: 786 RTQAAFFQHNRALIDDVEELEDRVRKRDILVDEETLFAFYDARLPADVAGARSFERWRKQ 845 Query: 820 VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIP 879 RE P++L E++ L+ AE++++ YP+ ++ L Y F PG DGVT+ +P Sbjct: 846 AEREAPEVLKLERATLMARDAEEVTQQAYPDELVHNGVRYPLDYHFAPGESDDGVTLTVP 905 Query: 880 LPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPL 939 +L+Q+ E EW +PGL RE IAL+K+LPK +RR VP P++ +A L + P E PL Sbjct: 906 AAMLSQLPEGRLEWLVPGLLREKCIALLKTLPKAIRRQVVPIPDWVDAALATLVPDERPL 965 Query: 940 LDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGK 999 ++L LRR TGV + +DW DQ+ HL + RVV + L EGR L LK Sbjct: 966 TEALGEFLRRRTGVRLSADDWRTDQLEPHLIMNLRVVAHDGEVLGEGRDLGALKQRFDEA 1025 Query: 1000 VQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP 1059 + A+A G L +PES ++ +V+A+PALVD DS+AI+ FD+P Sbjct: 1026 ASQGARALAASGPTAEALAELPEQAIPESRSTQQAGIRVEAYPALVDRGDSLAIESFDHP 1085 Query: 1060 LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDK 1119 + A +G++R +L +P ++YL +L + L F G +L+DD + + Sbjct: 1086 DKAHAAHRHGVKRAAMLRLPEQVRYLSRELKGLDRCALLFAKVGSKTQLVDDLVEAVFLQ 1145 Query: 1120 LIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMA 1179 ++ + P + A E R+EL + +++ L + K LKG +++++A Sbjct: 1146 VVAVDPLPR-DRQSLEARIEATRSELVAHAEERVATLQKALEGHLEVTKALKGNLNLSLA 1204 Query: 1180 LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN 1239 L SD+KAQM LVY GFV+ + + L RY+QA RLEK + RD+ M +V Sbjct: 1205 LVYSDLKAQMARLVYPGFVS-DAEEWLEQYPRYMQAALIRLEKAPRERSRDQMAMQQVHA 1263 Query: 1240 VQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 ++ + + R D E W +EELRVS FAQQLGT P+S KR+ + +++ Sbjct: 1264 FEERLRARLEADQREGRRDPRFVEFGWWLEELRVSLFAQQLGTLAPVSAKRLERRWTELT 1323 Query: 1300 G 1300 G Sbjct: 1324 G 1324 >UniRef50_C7NIQ1 ATP-dependent helicase HrpA n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ1_KYTSD Length = 1331 Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 652/1325 (49%), Positives = 851/1325 (64%), Gaps = 117/1325 (8%) Query: 82 KKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANR 141 +K D+ AIRDHQVV+VAGETGSGKTTQLPKIC+ELGRG+ G+IGHTQPRR+AAR+VA+R Sbjct: 4 RKDDLAAAIRDHQVVVVAGETGSGKTTQLPKICLELGRGVTGMIGHTQPRRIAARSVADR 63 Query: 142 IAEELKTE---PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 IA EL E P G +GY+VRF+D S T+VK+MTDGILL ++Q DR L YDT+IIDE Sbjct: 64 IAHELGVELEDPQGPVGYQVRFTDLSSPTTLVKVMTDGILLNQMQFDRDLRAYDTLIIDE 123 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-----NNAPIIEVSGRT 253 AHERSL IDF+LGYL++LLPRRPDLK+IITSATIDPERF+ HF N API+EVSGRT Sbjct: 124 AHERSLTIDFILGYLQQLLPRRPDLKVIITSATIDPERFAHHFADAEGNPAPIVEVSGRT 183 Query: 254 YPVEVRYRPIV-------------EEADDT-----ERDQLQAIFDAVDELSQESHG---- 291 YPVE+RYRP+ E D+T + DQ+ I AV EL E G Sbjct: 184 YPVEIRYRPLSLQETSNVAALADPEGYDETVYGEDDIDQVTGIGQAVQELWTEVIGPDDP 243 Query: 292 -----DILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 DIL+F SGEREIRD +AL L L TEI+PLY RLS++EQ RVF HS RR+VL Sbjct: 244 RPQDRDILVFCSGEREIRDATEALEGLKLPGTEIVPLYGRLSSAEQQRVFAPHSTRRVVL 303 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATNVAETSLTVPGI+YV+D GTARISRYS R KVQRLPIE IS+ASANQR GR GRVS G Sbjct: 304 ATNVAETSLTVPGIRYVVDTGTARISRYSQRLKVQRLPIEKISRASANQRAGRSGRVSAG 363 Query: 407 ICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 ICIRLYS++DF +RPEFTDPEI RT+LASVILQM LGLGD+ F FV+ PD R I DG+ Sbjct: 364 ICIRLYSQEDFEARPEFTDPEIQRTSLASVILQMAHLGLGDVQRFGFVDPPDPRQITDGL 423 Query: 467 RLLEELGAIT--TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 RLL ELGA+T T + LTP GR+L+ +P DPRLARM+LEA + G + E ++I + Sbjct: 424 RLLHELGAVTRETASRGGVVTLTPEGRELASIPADPRLARMLLEAHRRGALAEVLVIVAG 483 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LSIQDPRERP +K++ +D+ H RF D+ SDF+A +NLW Y E++ +LS +AFRRLCR + Sbjct: 484 LSIQDPRERPAEKRERADQLHARFKDENSDFVALLNLWQYARERKGSLSGSAFRRLCRAE 543 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNS------------------EPAEYREIHIAL 626 +L+YLR+REW D++ QLR VVK LG +S +PA+ +H +L Sbjct: 544 FLHYLRLREWVDVHHQLRSVVKGLGWQDSSLGLESDRTRQRDHGFAPVDPAKAEVVHRSL 603 Query: 627 LTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAAR 686 L GLLS +G++D + ++Y GAR A FSI PGSGLF+ P W+M AELVET+RLW R A Sbjct: 604 LPGLLSQVGLRDRETRDYLGARGAHFSIQPGSGLFRTRPDWIMSAELVETTRLWARTNAT 663 Query: 687 IDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCR 746 +DP WVE A HL+KR YSEP W + + +A E+VT+ G+P+VA R+V + +D L R Sbjct: 664 VDPAWVEEAADHLVKRQYSEPRWSAKRASAVADERVTLLGIPLVAGRQVGLATVDAPLAR 723 Query: 747 ELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHD 806 ELFIRHALVEGDWQT HAF+ N K+ AEVE+LE +SRRRD+L DDE LF FYD+R+ + Sbjct: 724 ELFIRHALVEGDWQTGHAFWGHNKKVLAEVEQLEARSRRRDLL-DDEALFAFYDERLPAE 782 Query: 807 VISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFE 866 V+SA HFDSWWK R P LL+ ++ E + + D+P W QG+++L L+YQFE Sbjct: 783 VVSAAHFDSWWKSHRRTEPHLLDLSVEEVVGEDSSGVDLADFPATWVQGDVELPLTYQFE 842 Query: 867 PGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAE 926 PG +ADGVT H+ L LN+V + GF+WQ+PGLR EL +AL++SLPK VRR+FVPAP++A Sbjct: 843 PGTEADGVTAHLTLSQLNRVRDEGFDWQVPGLREELAVALLRSLPKAVRRSFVPAPDHAA 902 Query: 927 AFLGRVKPLELPLLD------------------SLERELRRMTGVTVDREDWHWDQVPDH 968 A L K L L D +L L R TG +D D VP H Sbjct: 903 AAL---KDLSEQLADAPTGTATEPMRGSGTFAAALAGALTRRTGTPLDPADMDTAAVPAH 959 Query: 969 LKITFRVVDDKNKK--------------------------------LKEGRSLQDLKDAL 996 L++TFRV +D + L EG L L+ L Sbjct: 960 LRMTFRVTEDAPGEGGRVPGGKGAGGGAPRGKGSRGRRGPRQRPTVLAEGNDLTALQAQL 1019 Query: 997 KGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 G +QE ++ A G+ SGL W+ +LP ++ + V+ WPALVDE + +++F Sbjct: 1020 AGSLQEAVAGAA-AGLTASGLTSWTLDELPAHFD----DGGVQGWPALVDEGTTAGVQVF 1074 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 +P + GLRRL+L P + + N+ KL L P+G L++D ++ Sbjct: 1075 ADPRQAAHEHALGLRRLVLAGFNPPWNRILRSVDNQTKLALGAAPHGSTQALLEDALAAA 1134 Query: 1117 VDKLID---ANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGR 1173 VD +I A G V T E F + + ++++ ++L V + + ++ Sbjct: 1135 VDSVIAERLAAAGTVRTREAFEQVQATAVQQAAPRILEMVGAAGKVLAGVPAVERAVESM 1194 Query: 1174 VDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 +A D+ AQ+ GLV+ GF+T G++++ RYLQA+E+R K D RD + Sbjct: 1195 TAPRLAPLREDLTAQLRGLVHPGFLTHAGYEQVRHLPRYLQAMEQRAAKAPTDLARDTER 1254 Query: 1234 MLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 + V+ V++ + L R DV+ +RWM EELRVS FAQQLGT + +S+KRI Sbjct: 1255 LAVVQTVERERADLLAGLDELERLRPDVRALRWMTEELRVSLFAQQLGTAHAVSEKRIYA 1314 Query: 1294 AMEQI 1298 AM+ + Sbjct: 1315 AMDAV 1319 >UniRef50_C5CA12 ATP-dependent helicase HrpA n=5 Tax=Micrococcaceae RepID=C5CA12_MICLC Length = 1367 Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/1353 (49%), Positives = 873/1353 (64%), Gaps = 135/1353 (9%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 IT+P++LPV++++++I+ AIRDHQVVIVAGETGSGKTTQLPK+C+ LG G G IGHTQP Sbjct: 24 ITFPEHLPVAERREEIMAAIRDHQVVIVAGETGSGKTTQLPKMCLALGLGEAGSIGHTQP 83 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA RIA+EL E G +GY+VRF+ S T VK+MTDGILLAEI D L + Sbjct: 84 RRIAARSVAERIAQELGEEIGQTVGYQVRFTAQTSKATRVKVMTDGILLAEIPHDPQLRR 143 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------- 243 Y II+DEAHERSLNIDFLLGYL+ LLP+RPDLK+IITSATIDPERF+RHF Sbjct: 144 YSVIIVDEAHERSLNIDFLLGYLRNLLPQRPDLKVIITSATIDPERFARHFGRSLAAGED 203 Query: 244 ---------------APIIEVSGRTYPVEVRYRPIVEEADDT-----------ERDQLQA 277 APIIEVSGRTYPVE+RYRP+ EE RD L A Sbjct: 204 HADAVEADDGGRVVPAPIIEVSGRTYPVEIRYRPLTEEPSPDDPEDDADDAAETRDPLDA 263 Query: 278 IFDAVDELSQESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQ 332 I DAV EL+ E GDIL+F+ GEREIR+ AD L + L TEILPL+ RLS +EQ Sbjct: 264 IGDAVLELAAEPPGDILVFLPGEREIREAADHLTGVVAGTTRLAGTEILPLFGRLSMAEQ 323 Query: 333 NRVF-QSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPIS 389 +RVF ++ +G RRIVLATNVAETSLTVPGIKYVID GTARISRYS+RTKVQRLPIE +S Sbjct: 324 HRVFGRAGAGVRRRIVLATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERVS 383 Query: 390 QASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL---- 445 QASANQR GR GR S+GI IRLYSE+D+LSRPEFTDPEILRT+LASVILQM +LG+ Sbjct: 384 QASANQRAGRSGRTSDGIAIRLYSEEDYLSRPEFTDPEILRTSLASVILQMLSLGVARTP 443 Query: 446 GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARM 505 GD+ FPFV+ PD R + DG L ELGA+ A A +T +GR+L++LPVDPRL RM Sbjct: 444 GDVKEFPFVQPPDGRQVTDGAATLTELGALEAG-GARAGTITRVGRRLARLPVDPRLGRM 502 Query: 506 VLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL 565 +LEA + GCVRE M+I +AL+IQDPRERP ++++A+DE HRRF D+ SDF A +NLW YL Sbjct: 503 ILEAGERGCVREVMVIAAALTIQDPRERPTEQREAADELHRRFADENSDFSAILNLWAYL 562 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YRE 621 E+Q+ LS + FR+LCR +++N+LRV+EWQD+ QLRQ+ K++G+ V + P + + Sbjct: 563 RERQQELSGSQFRKLCRREHINWLRVQEWQDLVRQLRQLTKDVGLTVEAGPVDPVGRHEA 622 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 +H +LLTGLLS IG D ++EY GAR RF++FPGS LFKK +VM AELVETSRLW Sbjct: 623 VHKSLLTGLLSQIGAYDERRREYAGARGTRFAVFPGSALFKKRHPFVMAAELVETSRLWA 682 Query: 682 RIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQID 741 R ARI+PEW E VA HL+KR Y+EPHW R G+V+A EKVT++G+ ++ R V Y +ID Sbjct: 683 RTVARIEPEWAEEVAGHLVKRAYNEPHWSRRAGSVVAREKVTLFGVTLIPDRSVRYGRID 742 Query: 742 PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQ 801 P L RELFIRHALVEGDW+TRH FF N EV+ LE + RRRD+ + DE LF FYD Sbjct: 743 PELSRELFIRHALVEGDWRTRHRFFARNRAALEEVDALETRLRRRDLRIGDEDLFAFYDA 802 Query: 802 RISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWH----QGNL 857 RI DV+S RHFD+WWKK +E PDLL+ + + L+ AE + +P + G++ Sbjct: 803 RIPGDVVSERHFDAWWKKARQEQPDLLDLDVAALLTADAEDLDTDAFPTTFTYPMPGGDV 862 Query: 858 KLRLSYQFEP--GADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVR 915 +L L Y F+P A DGVTV +P+ LLNQV F W +PGLR ELV ALIK+LPK VR Sbjct: 863 ELDLEYTFDPTGAAGTDGVTVAVPILLLNQVSPGPFAWLVPGLRVELVTALIKALPKAVR 922 Query: 916 RNFVPAPNYAEAFLGRVK----PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKI 971 +N VPAP+ A+ + ++ PL L D+L +RR+ GV V+ W D VP HL++ Sbjct: 923 KNLVPAPDVAQQLVADLEAHADPLRDELPDALSAAVRRVRGVVVEPGLWALDAVPLHLRM 982 Query: 972 TFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA------DDGI------------- 1012 +RVVD + + G+ L L+ L Q SA+A DD Sbjct: 983 DYRVVDARGAVMGAGQDLPALQARL---AQANRSAIAARLAGTDDPASARPGPRGTGRGG 1039 Query: 1013 -----------------------------EQSGLHIWSFGQLPESYEQKRG--NYKVKAW 1041 E+ GL WS G +P++ G + + Sbjct: 1040 RAQTDARAGAEGRRRPEGPGRSDATPAFEERHGLTSWSIGTVPKTVSTAAGARGPAITGY 1099 Query: 1042 PALVDER---DSVAIKLFDNPLEQKQAMWN--GLRRLLLLNIPSPIKYLHEKLPNKAKLG 1096 P+LV E A L QA W+ G+ RLLL +PSP +Y+ + L N+ KL Sbjct: 1100 PSLVPETTPDGGPAAGLTVARSADDQAAWHRAGVIRLLLATLPSPQRYVLDHLDNREKLT 1159 Query: 1097 LYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQV 1156 NP+G V L+ DC VD+L+ + P + E F AL ++VRA+L DTV + V Sbjct: 1160 FTQNPHGSVDSLVADCTQAAVDRLV-GDELP-FDEAAFRALFDRVRADLIDTVFAVTSLV 1217 Query: 1157 EQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAI 1216 EQ+L+ + +RLKG V +A LSD+KA + LV+ GFV G++RL RYLQ + Sbjct: 1218 EQVLSRAAQVRRRLKGSVSPALASALSDVKAHLEQLVFPGFVAATGWERLQHLPRYLQGM 1277 Query: 1217 EKRLEKLAVDPH--RDRAQMLKVENVQQAWQ--------QWINKLPPARREDEDVKEIRW 1266 RL++L H RD M V+ ++ + ++ PA +++ +RW Sbjct: 1278 LTRLDRLDAGGHLQRDGQHMAVVQGLEDEFDAAVAAHRARFAGTPVPA-----ELERVRW 1332 Query: 1267 MIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 +IEELRVS+FAQ+LGT +S+KR+ QA+ + + Sbjct: 1333 LIEELRVSFFAQELGTAVSVSEKRVRQALARAT 1365 >UniRef50_C8NU49 ATP-dependent helicase HrpA n=8 Tax=Corynebacterium RepID=C8NU49_9CORY Length = 1313 Score = 1201 bits (3106), Expect = 0.0, Method: Compositional matrix adjust. Identities = 642/1320 (48%), Positives = 854/1320 (64%), Gaps = 44/1320 (3%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 +T AL+ RLD L + RF RRL KK K P+A AI ++ +E+ KV +A Sbjct: 10 ITRDALKARLDELPIAQVRRFDRRL---KKAKAPNALAAIHTDLEEEV----AKVAAIDA 62 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 P+ITYP+ LPVS +++DI IRD+QVV++AGETGSGKTTQ+PK+ +ELGRG +GLIG Sbjct: 63 LVPQITYPEQLPVSARREDIKNLIRDNQVVVIAGETGSGKTTQIPKMLLELGRGRRGLIG 122 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AARTVA RIA+EL + G +GY +RF D VS T VKLMTDGILLAE+Q+DR Sbjct: 123 HTQPRRIAARTVAERIADELGQDIGRSVGYAIRFDDRVSATTAVKLMTDGILLAEMQRDR 182 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----- 241 L YDTIIIDEAHERSLNIDFLLGYLK LLP RPDLKIIITSATIDPE F+ HF Sbjct: 183 YLNAYDTIIIDEAHERSLNIDFLLGYLKRLLPYRPDLKIIITSATIDPESFAEHFADSDG 242 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADD-------TERDQLQAIFDAVDELSQESHGDIL 294 N APIIEVSGRTYPVE+RYRP+ E + D L + +A+ EL E GDIL Sbjct: 243 NPAPIIEVSGRTYPVEIRYRPLETEVPTKDGGTKVVDTDMLDGLIEALKELMAEGDGDIL 302 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS 354 F + ER+IRD + + K R E+ PL+ RLSN+EQ+RVF HSGRRIVLATN+AETS Sbjct: 303 CFFASERDIRDAMELIEKQRWRGVEVTPLFGRLSNAEQHRVFSPHSGRRIVLATNIAETS 362 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LTVPGI YV+D G ARISRYS RTKVQRLPIE ISQASANQR GR GR+++GI IRLYSE Sbjct: 363 LTVPGIHYVVDTGLARISRYSTRTKVQRLPIEEISQASANQRSGRSGRIADGIAIRLYSE 422 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 D+F +RPEFTDPEILRTNLASVILQMT L LGDIA FPFV+ PDK+ ++DG+ LL ELGA Sbjct: 423 DNFHARPEFTDPEILRTNLASVILQMTNLRLGDIAEFPFVQPPDKKAVRDGLMLLHELGA 482 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 IT E LT +GR ++++PVDPR+ARM++EA + G + + +I ++++IQD RERP Sbjct: 483 ITDKEDQDMPVLTGIGRDIARIPVDPRMARMLVEAHRLGVLDDVTVIVASMTIQDVRERP 542 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 ++ Q +D+ H RF DK SDFLA +NLW+YL + + LS NAFR+ + +YL+Y+R+REW Sbjct: 543 LEFQAQADQAHARFKDKTSDFLAALNLWDYLKDSRNELSGNAFRKRMKKEYLHYMRIREW 602 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEY---------REIHIALLTGLLSHIGMKDADKQEYT 645 D+ QLR+ ++LG + + + IH ALLTGLLS+IG +D +E+ Sbjct: 603 FDLVRQLREAERQLGWARTATATDDHDDSRDRDPKSIHQALLTGLLSNIGARDGTSKEFK 662 Query: 646 GARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 GAR RF IFPGS L KKPP++VM AELVETSRLW R A IDP WVE VA L+K YS Sbjct: 663 GARGTRFMIFPGSVLAKKPPEFVMAAELVETSRLWARDVAAIDPAWVEKVAGGLLKHNYS 722 Query: 706 EPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAF 765 EP W + A M +K +YG+ +VA R V Y ++D R +FIRHAL++G+W HAF Sbjct: 723 EPIWSIKRAAPMVHQKSMLYGVTVVADRLVPYHRVDMDAARTMFIRHALIDGEWNAHHAF 782 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 + N KL E ++E K RRR ++VD+E LF+FYD+R+ ++ + RHFD+WWKK E Sbjct: 783 LKHNAKLLEEAAKVEEKVRRRGLVVDEEALFDFYDERLPDNIGTGRHFDAWWKKKKHEDA 842 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 L+F+ S LI + S+ +P+ QG++ L Y+FEPG DGVTV +P+PLL Sbjct: 843 AFLDFDPSALIDDSDADTSEDSFPDKIRQGSIDYDLQYKFEPGDPFDGVTVLVPVPLLAG 902 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLER 945 +EE F+W +PGLR ELV LI+SLPK +R+ VPAP +A L ++ P E PL + L Sbjct: 903 LEEREFDWLVPGLREELVTELIRSLPKALRKTVVPAPEFAARALDKLVPYESPLNEQLAE 962 Query: 946 ELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLS 1005 LR + G ++ D+ + +P HLKITF +D K K SL LK G++ ++ Sbjct: 963 VLRSLGGHGINASDFRPEALPPHLKITFASIDRKGKITDHDTSLAALKKRRAGQITSSV- 1021 Query: 1006 AVADDGIEQSGLHIW---SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQ 1062 A A E + W + G +PE+ K V A+PAL D V +K+F Sbjct: 1022 AKATKKAESDSVTKWTEDTLGDVPETVTTKIEGNNVDAFPALEATNDGVRVKVFPTKAAA 1081 Query: 1063 KQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLID 1122 Q+M +L+ I + + + LP + ++ + P+G L++D + L+ Sbjct: 1082 DQSMVTATLAMLMRQIDVSVSQMVKGLPLRQRVAVDKYPHGGAAGLVEDARVAAIRDLMF 1141 Query: 1123 ANGGPVWTEEGFAALHEKVRAELND----TVVDIAKQVEQILTAVFNINKRLKGRVDMTM 1178 A+GGPV T F AL KV+ E+ TVV IA V + + + +D Sbjct: 1142 AHGGPVRTPAEFDALLNKVKPEVAGMVRRTVVGIAGGVVEYINTAAELQNWDGPAID--- 1198 Query: 1179 ALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVE 1238 DI+ QM L+ + +T +G + L RY+ AI+ RLE++ DP RD + V+ Sbjct: 1199 -----DIRQQMNFLLPKNAITVHGMENLQHLPRYMSAIQIRLEEMNRDPDRDADRQSVVD 1253 Query: 1239 NVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +V++ + +LP A R+ VK+I W I+ELRVS FAQ+LGT P+S +RI + ++++ Sbjct: 1254 DVKKYLDAKLARLPQAARKSRAVKDILWRIQELRVSLFAQRLGTAKPVSPRRIEKMVDKL 1313 >UniRef50_A8L7U0 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. EAN1pec RepID=A8L7U0_FRASN Length = 1441 Score = 1198 bits (3100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 594/1081 (54%), Positives = 763/1081 (70%), Gaps = 53/1081 (4%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLS 328 DTERDQ+ AI DAVDEL E GDIL+F+SGEREIRDTADAL + +L TEI+PLYARLS Sbjct: 360 DTERDQVSAICDAVDELCAEGPGDILVFLSGEREIRDTADALARRDLPMTEIVPLYARLS 419 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 ++EQ+RVF H+GRRIVLATNVAETSLTVPGI+YVIDPG ARISRYS+RTKVQRLPIEP+ Sbjct: 420 SAEQHRVFTPHTGRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSHRTKVQRLPIEPV 479 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 SQASANQR GRCGR S+GICIRLYSE+DF RP FTDPEILRTNLASVILQM ALGLG++ Sbjct: 480 SQASANQRAGRCGRTSDGICIRLYSEEDFAGRPAFTDPEILRTNLASVILQMEALGLGEM 539 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE 508 A FPF++ P+ R + DG+RLL ELGA D + +LTP+GR L+QLPVDPRLARMVL Sbjct: 540 ADFPFLDPPESRQVTDGMRLLTELGAFIEDAE-PGKRLTPIGRSLAQLPVDPRLARMVLA 598 Query: 509 AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 A + GC+ E ++I SAL+IQDPRERP++ + A+DE+H RF D SDFL+ +NLW +L Sbjct: 599 AGELGCLSEVLVIASALAIQDPRERPVEHRAAADERHARFTDPTSDFLSILNLWRHLRTA 658 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLT 628 ++ SSN FRR+CRT++LNYLR+REWQD++ QLR + + LG+ N PA+ R +H ALLT Sbjct: 659 REERSSNQFRRMCRTEFLNYLRIREWQDVHGQLRAIARNLGLEPNDSPADARSVHQALLT 718 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP------------------------ 664 GLLSH+G + +K++Y GAR ARF+IFPGSGL ++ Sbjct: 719 GLLSHLGRYEPEKKDYLGARGARFAIFPGSGLARRRPARPEAGDAGRGAPAEADAEAGGR 778 Query: 665 -----PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 P WV+ AELVETSRLW R AR++PEWVEP+A+HL++ TYSEPHW R Q A +A Sbjct: 779 RGPGIPTWVVAAELVETSRLWARTVARVEPEWVEPLAEHLLRHTYSEPHWSRKQAAALAY 838 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 EKVT+YG+P+V +R V Y +IDP + R+LFIRHALVEGDW TRHAFF N +L A VEEL Sbjct: 839 EKVTLYGIPLVTSRLVQYGRIDPVVSRDLFIRHALVEGDWNTRHAFFHANRELLAGVEEL 898 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 EH++RRRDILVDDETLFEFYDQRI DV+S RHFD+WWK R PDLL+F SML+ + Sbjct: 899 EHRARRRDILVDDETLFEFYDQRIPADVVSGRHFDTWWKATRRAEPDLLDFSASMLVNDR 958 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 A I + DYP+ W ++L L+YQF PG ADGVTV +PLP+L + F WQ+PGLR Sbjct: 959 AGAIRQQDYPDTWVADGVELALTYQFTPGEAADGVTVRVPLPVLGTLRAEPFTWQVPGLR 1018 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL------------------ELPLLD 941 ELV ALI++LPK VRR FVPAPNYA A L R+ P + PL D Sbjct: 1019 EELVTALIRALPKVVRRGFVPAPNYARAVLDRLTPGDRPAPGGPPSEGGGPPADDRPLAD 1078 Query: 942 SLERELRRMTGVTVDREDWH----WDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALK 997 ++ EL RM+G + W + +P HL++TFRVVDD L EG+ L +L+ L+ Sbjct: 1079 AVAGELHRMSGSALPSGVWAPPRLAELLPPHLRMTFRVVDDGGATLAEGKDLAELRARLR 1138 Query: 998 GKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 + + ++A A +E+SGL W G LP E+ RG + V+A PALVDE SVA+++FD Sbjct: 1139 PRTKAVVTAAAAG-VERSGLRAWDVGTLPAVIERSRGGHVVRAHPALVDEGGSVAVRVFD 1197 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGV 1117 + E +AMW G RRLLLLN+ SP++ + +LPN AKL L NP+ V +L+DDC++ V Sbjct: 1198 DREEADRAMWAGTRRLLLLNVASPVRGIIGRLPNAAKLALSNNPHRDVTDLLDDCVAAAV 1257 Query: 1118 DKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 D L+ GG E GFAAL E VRAEL DT + + E++L A I+ ++ Sbjct: 1258 DTLLRRAGGAARDEAGFAALLETVRAELADTAWSVVRGTERVLAAAHEISLGVRALGSPA 1317 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 + + +D++AQ+ L++RGFVT G +RL D RYL A +RL++L D RDR L+V Sbjct: 1318 LLVTATDLRAQLDTLIHRGFVTETGAERLPDLERYLTAARRRLDRLPADAARDRQLTLRV 1377 Query: 1238 ENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 NV +A+ + I+++ PAR E V+ IRWMIEELRVS FAQ L TPYP+S++R+ +A+++ Sbjct: 1378 RNVVEAFNELIDEVGPARAGSEPVQAIRWMIEELRVSLFAQALRTPYPVSEERVYRAIDR 1437 Query: 1298 I 1298 + Sbjct: 1438 L 1438 Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 159/276 (57%), Positives = 206/276 (74%), Gaps = 26/276 (9%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPD 75 L LM RD R SR L +++++P A+ + +A +++ A +V R A+ P I YP+ Sbjct: 22 LPQLMARDAHRLSRHLDRARRMRDPAARDSSIARLAADVETARLRVETRRASVPVIGYPE 81 Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LPVSQ++ +IL A+RD+QVV++AGETGSGKTTQLPK+C+ELGRG++G+IGHTQPRR+AA Sbjct: 82 ELPVSQRRDEILAALRDNQVVVIAGETGSGKTTQLPKLCLELGRGVRGMIGHTQPRRIAA 141 Query: 136 RTVANRIAEELKT---EPG-----------------------GCIGYKVRFSDHVSDNTM 169 RTVA RIAEEL + E G G +GY++RF+D V +T+ Sbjct: 142 RTVAERIAEELGSVIPETGRDRAQAGPNGNGSGGGNGSGGGGGLVGYQMRFTDRVGPSTL 201 Query: 170 VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITS 229 +KLMTDGILL E+ DRLL QYDT+IIDEAHERSLNIDF+LGYL LLPRRPDLK++ITS Sbjct: 202 IKLMTDGILLNELTADRLLRQYDTLIIDEAHERSLNIDFILGYLHGLLPRRPDLKVVITS 261 Query: 230 ATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 ATIDP RF+RHF++AP+IEVSGRTYPVE RYRP+++ Sbjct: 262 ATIDPHRFARHFHDAPVIEVSGRTYPVETRYRPLID 297 >UniRef50_D1BIN2 ATP-dependent helicase HrpA n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BIN2_SANKS Length = 1560 Score = 1192 bits (3084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/1430 (46%), Positives = 860/1430 (60%), Gaps = 209/1430 (14%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P I +P+ LPVS +++DI AIRDHQVVIVAGETGSGKTTQLPKI +ELGRG G IGHT Sbjct: 126 PPIVFPEQLPVSARREDIAAAIRDHQVVIVAGETGSGKTTQLPKIALELGRGRAGQIGHT 185 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AARTVA RIAEE+ T G +GY+VRF+D S+NT+VK+MTDGILLA+IQ+D L Sbjct: 186 QPRRIAARTVAERIAEEIGTPLGEIVGYQVRFTDTSSENTLVKVMTDGILLAQIQRDPQL 245 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 243 + YDT+IIDEAHERSLNIDF+LGYL +LLP+RPDLK+IITSATID +RF+RHF Sbjct: 246 LAYDTLIIDEAHERSLNIDFILGYLTQLLPQRPDLKVIITSATIDSDRFARHFAPRDAQD 305 Query: 244 ------------------------APIIEVSGRTYPVEVRYRPIVEEADDT----ERDQL 275 AP++ V+GRT+PVEVRYRP+ E ERD + Sbjct: 306 AAKAAAQTEPVDGTDDTSADDAPMAPVVSVTGRTFPVEVRYRPLTPEDSSAKKGAERDLM 365 Query: 276 QAIFDAVDELSQESHGDILIFMSGEREIRDTADAL-NKLNLR--------HTEILPLYAR 326 I DAVDEL E GDIL+F+SGEREI D DAL + L R H EI+PLYAR Sbjct: 366 TGICDAVDELCAEGPGDILVFLSGEREILDAQDALASHLGARVNDPRRPDHVEIMPLYAR 425 Query: 327 LSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 LS +EQ+RVFQSH GRR+VL+TNVAETSLTVPGI+YV+DPGTARISRYS TKVQRLPIE Sbjct: 426 LSAAEQHRVFQSHPGRRVVLSTNVAETSLTVPGIRYVVDPGTARISRYSKATKVQRLPIE 485 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL- 445 PI+QASANQR GRCGRV++GI IRLYSEDDFLSRPEFT+PEILRT+LASV+LQM ++G+ Sbjct: 486 PIAQASANQRSGRCGRVADGIAIRLYSEDDFLSRPEFTEPEILRTSLASVLLQMISVGVV 545 Query: 446 ---GDIAAFPFVEAPDKRNIQDGVRLLEELGAITT------------------------- 477 D+A FPFVE PD R I+DGV+LL ELGA+ T Sbjct: 546 RTPDDVARFPFVEPPDTRAIRDGVQLLTELGALETRKPERRGATSRPAGTHVEGGSSAPS 605 Query: 478 DEQAS--------AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 DE+AS +LT GR ++QLP+DPRLARM++E + G RE MII +ALSIQD Sbjct: 606 DERASRDALGSGGGTRLTETGRAIAQLPMDPRLARMIVEGGRRGAAREVMIIAAALSIQD 665 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 PRERP +++ +D++H RF D SDFL+++NLW Y QQ+ LSS+AFRRLCR ++LN+L Sbjct: 666 PRERPTEQRAQADQQHARFTDPTSDFLSYLNLWEYARAQQRDLSSSAFRRLCRAEHLNFL 725 Query: 590 RVREWQDIYTQLRQVVKELGIPVNS-----------EPA---------EYREIHIALLTG 629 R+REWQD+ QLR + K LGI +N+ EP + IH +LL G Sbjct: 726 RIREWQDVVGQLRDMSKPLGIVMNAPGRRSGGSSTDEPVADLDLRQTWDGDTIHQSLLAG 785 Query: 630 LLSHIGMKDAD----------------------KQEYTGARNARFSIFPGSGLFKKPPKW 667 LLS IGM++A + EY GAR ARF+IFPGSGL KKPP W Sbjct: 786 LLSQIGMQEATEVKASAVKGRETAADRRAKKFARNEYLGARGARFAIFPGSGLAKKPPVW 845 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 VM ELVETSRLWGR A+I PEW E +A HL+KRTYSEPHW QGA A EKV +YG+ Sbjct: 846 VMAGELVETSRLWGRDVAKIQPEWAEDLAAHLVKRTYSEPHWSSKQGAAQAIEKVLLYGV 905 Query: 728 PIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRD 787 PIVA RKV +S++DP RELFIRHALV+G+W T H F+ +N +L E ELE +SR+R Sbjct: 906 PIVADRKVLFSKVDPEQARELFIRHALVQGEWTTHHTFYADNRRLLDEAAELEARSRQRG 965 Query: 788 ILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLD 847 ++VDD+ LF FYD+R+ V+SARHFD WWK RE PDLL F +L+ EG E +S D Sbjct: 966 LVVDDDALFAFYDERVPASVVSARHFDQWWKSARREDPDLLTFTLDLLVPEGTE-VSAED 1024 Query: 848 YPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALI 907 +P W QG+L L L+YQF+PG DADGVTVH+P+ +LN+V GF+W +PGL EL A I Sbjct: 1025 FPQEWVQGDLTLPLTYQFQPGTDADGVTVHVPISVLNRVVPDGFDWMVPGLLDELTTATI 1084 Query: 908 KSLPKPVRRNFVPAPNYAEAFLG-------------RVKPLELPLLDSLERELRRMTGVT 954 ++LPKPVR VPAP+ A + R + + R ++ + V Sbjct: 1085 RALPKPVRVQLVPAPDVARGVVAWIRENTPAWGDVTRAGDMAESYESAFTRAVKALRDVD 1144 Query: 955 VDREDWHWDQVPDHLKITFR---------------VVDDKNKKLKE------GRSLQDLK 993 V + W +++P HL++TFR VV D++K L +S ++ Sbjct: 1145 VPEDAWDRERLPGHLRMTFRVFEERGGRGSGPRGEVVLDESKDLVALQRRLAAQSQAAVR 1204 Query: 994 DALKGKVQETL-------------------------------------SAVADDGI---E 1013 A+K V L + A G+ E Sbjct: 1205 SAVKSAVGTALREAQQEAQDAAAASQKAGTGAPGAAAATGGPTAPAASTPDAPTGVTVAE 1264 Query: 1014 QSGLHIWSF----GQLPESYEQKR-GNYKVKAWPALVDERD----SVAIKLFDNPLEQKQ 1064 + L W G LP + G V+ +PALV+ER +VA+++ + Q+ Sbjct: 1265 VASLATWPSALPDGVLPAQVDTPGPGGMVVRGYPALVEERSGSTTTVALRVLADASRQEV 1324 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 G+RRLLL + + L L +PY L+ D V + + + Sbjct: 1325 EHTRGVRRLLLGETALQQSRITSRWSGTQSLTLAASPYKNTGALVADLQLAAV-QCLTPD 1383 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 G V + A+ V+ L + + + V LTA ++ ++ + + L+D Sbjct: 1384 AGQVRDLAAYTAMRTAVKKALEEEIHTVVGHVVAALTAARTVDGEIRSSSSLALLNTLAD 1443 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 ++ + GLVY GFV RL RYL+A RLEK A +P+RD KV +V+ A+ Sbjct: 1444 VRDHVAGLVYDGFVAATPPGRLPHLARYLRAASYRLEKAASNPNRDAELAWKVHDVEDAY 1503 Query: 1245 QQWINKLPPARREDEDVKEI---RWMIEELRVSYFAQQLGTPYPISDKRI 1291 R + E+ RWMIEELRVS FAQQLGT P+S+KRI Sbjct: 1504 DAARAAYAAGRPDPARASELAQARWMIEELRVSLFAQQLGTDGPVSEKRI 1553 >UniRef50_C7ME24 ATP-dependent helicase HrpA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7ME24_BRAFD Length = 1297 Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust. Identities = 641/1284 (49%), Positives = 852/1284 (66%), Gaps = 57/1284 (4%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGH 127 P +TYP +LPVSQ+++DI AI +HQVV++AG TGSGKTTQ+PK+ +ELG G G LIGH Sbjct: 18 PRLTYPGDLPVSQRREDIQAAITEHQVVVIAGATGSGKTTQIPKMLLELGYGQGGKLIGH 77 Query: 128 TQPRRLAARTVANRIAEELKTEPG-GCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AAR+VA RIA E+ + G G +GY+VRF+ S T +KLMTDGILLAEI +DR Sbjct: 78 TQPRRIAARSVAQRIAGEMGEKLGEGTVGYQVRFTRETSRGTRLKLMTDGILLAEIGRDR 137 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--- 243 LL +YD IIIDEAHERSLNID +LGYL+++LP+RPDLKIIITSATIDPERF+ HF Sbjct: 138 LLKRYDAIIIDEAHERSLNIDVILGYLRQILPQRPDLKIIITSATIDPERFAEHFAKVLP 197 Query: 244 ------APIIEVSGRTYPVEVRYRPIVEE-----------ADDTERDQLQAIFDAVDELS 286 APIIEVSGRTYPVE+RYRP+V E ERD QAI DAVDELS Sbjct: 198 SGERRPAPIIEVSGRTYPVEIRYRPLVLEPEMEDDDELEDVHSIERDLTQAIIDAVDELS 257 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLRHT--------EILPLYARLSNSEQNRVF-- 336 E GD+L+F+ GEREIR+ ++AL R T E+LPL+ RLS +Q ++F Sbjct: 258 AEGPGDMLVFLPGEREIREISEALTTHLSRGTRGRGALPVEVLPLFGRLSAQDQQKIFSP 317 Query: 337 -QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 ++ + RR++L+TNVAETSLTVPGI YVID G ARISRYS RTKVQRLPIEPISQASA+Q Sbjct: 318 PKAGTYRRVILSTNVAETSLTVPGITYVIDSGLARISRYSQRTKVQRLPIEPISQASADQ 377 Query: 396 RKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 R GR GR + GI IRLYS++DF RPEFT+PEILRT+LASV+L MT+LGLGD+ AFPFVE Sbjct: 378 RSGRSGRTAPGIAIRLYSQEDFEGRPEFTEPEILRTSLASVVLLMTSLGLGDVEAFPFVE 437 Query: 456 APDKRNIQDGVRLLEELGAIT-TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 P R I DGVRLL+ELGAI + +LT +GR L++ P+DPR+ARM++EA + G Sbjct: 438 PPANRAITDGVRLLDELGAIEDAPGEPGGRRLTRIGRSLARFPLDPRMARMLIEADRLGA 497 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 +RE ++I + LSIQDPRERP+ ++Q + EKH+RF D+ SDFLAF+NLWN+L +++K LSS Sbjct: 498 LREVLVIVAGLSIQDPRERPLGQEQQAKEKHKRFEDETSDFLAFLNLWNHLRQRRKELSS 557 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 +AFRR R ++L+YLR+REW D++ QLR + K+ G+ N A + IH +LL GLLSH+ Sbjct: 558 SAFRREVRAEHLHYLRIREWWDLHAQLRDMAKDAGLSRNDNDASPQAIHQSLLAGLLSHV 617 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 G+ D +EY GAR ARF+++PGS L KK P +VMVAELVETSRLWGR AARIDP W E Sbjct: 618 GLLDDRTREYAGARGARFALWPGSALAKKRPDYVMVAELVETSRLWGRTAARIDPAWAEE 677 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 H++KR++S PHW + + MA +KVT+YG+P+VA R V Y +IDP RE+F++HAL Sbjct: 678 TGAHVVKRSHSAPHWSSKRASAMARQKVTLYGVPLVADRVVGYGRIDPEAAREIFLQHAL 737 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 +EGDW+TRH FFR+N L E+EELE K+RRRD+L+ DE LF FYD+RI V+S RHFD Sbjct: 738 IEGDWRTRHHFFRDNRALIQELEELEAKTRRRDLLISDEQLFRFYDERIPRTVVSGRHFD 797 Query: 815 SWWKKVSRETPDLLNF-EKSMLIKEG--AEKISKLDYPNFWHQGNLKLRLSYQF-EPGA- 869 SWWK ETPDLL EK +L + AE I+ D+P+ W QG++ L LSY F E GA Sbjct: 798 SWWKTQRHETPDLLTLTEKDLLAADESVAEAIAA-DFPDSWVQGDITLPLSYAFGEVGAK 856 Query: 870 DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL 929 ADGVT +PL +LN+++ GF+W +PG+R ELV LI+SLPKP+RR+ VPAP A+A Sbjct: 857 GADGVTATVPLAVLNRLQARGFDWLVPGMREELVTELIRSLPKPIRRHLVPAPERAKAVA 916 Query: 930 GRVKPLEL----PLLDSLERELRRMTGVTVD----REDWHWDQVPDHLKITFRVVDDKNK 981 + + P L+++ EL + GV D ++ ++P HL++ FRVVDDK + Sbjct: 917 TTLHDDDPDTGEPFLEAVADELVALPGVPDDLPLYGPEFDVAKLPAHLRMHFRVVDDKGR 976 Query: 982 KLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAW 1041 ++ G L+ LK LK +V ++S+ AD + ++ L + +P +E G KV + Sbjct: 977 QIGTGDDLEALKGTLKERVDASVSSQADS-LARTDLPAFPDEGVPAVHESTVGGLKVTGY 1035 Query: 1042 PALVDERDS------VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKL 1095 PALV R V + + EQ A G+ LL ++ + + + LP KL Sbjct: 1036 PALVARRGEDGRLQRVDLAVLATADEQALAHREGVIALLDRDLGADLAAVLNALPTPTKL 1095 Query: 1096 GLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQ 1155 + Y L+ D L A V T+ + AL ++VR + + K Sbjct: 1096 AAASSDYASTAALLADASRAATVHL--AGTAEVRTKAQYDALLDRVRRQHDALAAQAVKD 1153 Query: 1156 VEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQA 1215 L ++K L + + L+ I+ L+ GF++ G + L D RYL+A Sbjct: 1154 AAAALAVSGTLHKALSRVPSLAVLSHLTQIREHAASLLGDGFISRTGIEHLPDLRRYLEA 1213 Query: 1216 IEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSY 1275 RLEKL +P RD ++ +++Q W KL RR + DV+EI W++EELRVS Sbjct: 1214 DAIRLEKLPSNPRRDEQLAWQIGDLEQYWAARKAKLSARRRAEADVREIDWLLEELRVSL 1273 Query: 1276 FAQQLGTPYPISDKRILQAMEQIS 1299 FAQ LGT +SDKRI +A+ +I+ Sbjct: 1274 FAQTLGTKQTVSDKRIRKAIAEIA 1297 >UniRef50_Q0F3B4 ATP-dependent helicase HrpA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3B4_9PROT Length = 1289 Score = 1182 bits (3059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 622/1286 (48%), Positives = 856/1286 (66%), Gaps = 15/1286 (1%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 L +L M+ +R + S+RLHG+++ ++ + EI ++ R A P Sbjct: 5 LSGQLAECMIAERRKLSKRLHGLRRRLQQKKPVDRALAALTAEIAASSACHARRRQACPA 64 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 ++YP LPVS+K++ I AI HQVVI+AGETGSGKTTQ+PKIC+ELGRG+ GLIGHTQP Sbjct: 65 VSYPAELPVSEKRETIAAAIAKHQVVIIAGETGSGKTTQIPKICLELGRGMAGLIGHTQP 124 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA RIAEE+ + G +GYKVRFSDH + +KLMTDGILLAEIQ D LL+ Sbjct: 125 RRIAARSVATRIAEEMGSPIGEHVGYKVRFSDHTGTDAYIKLMTDGILLAEIQSDPLLLA 184 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTIIIDEAHERSLNIDFLLGYLK+LLP+R DLKIIITSATI+ RFS FN AP+IEVS Sbjct: 185 YDTIIIDEAHERSLNIDFLLGYLKQLLPKRRDLKIIITSATINTGRFSAFFNEAPVIEVS 244 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADA 309 GRT+PVE+RYRP+ + DD +RD QAI DAVDE + + GDILIF+ GEREIR +A Sbjct: 245 GRTHPVEIRYRPLQGDDDDRDRDLPQAIMDAVDEAALIDRFGDILIFLPGEREIRAVTEA 304 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTA 369 L++ + TE++PL +RLS +EQ+RVFQ H+GRRIVLATNVAETSLTVPGI++VID G A Sbjct: 305 LHQHKMTQTEVIPLLSRLSPAEQDRVFQKHTGRRIVLATNVAETSLTVPGIRFVIDSGLA 364 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 RISRYS RTKVQRLPIEP+SQASANQR GRCGRV+ GICIRLYSE+ F +RPE TDPEI Sbjct: 365 RISRYSTRTKVQRLPIEPVSQASANQRAGRCGRVAAGICIRLYSEESFDNRPEQTDPEIR 424 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 RTNLASVILQM+ LGLGD+AAFPF++AP+K I+DG LLEEL A+ + + LT + Sbjct: 425 RTNLASVILQMSNLGLGDVAAFPFMDAPEKPAIRDGYLLLEELQAVDSKRE-----LTLI 479 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 G++L +LPVDPR+ RM+L+A + E +II SALS+QDPR RPMD QQ +DEKHR F Sbjct: 480 GKKLVRLPVDPRIGRMLLQADSERSLHEVLIIASALSVQDPRTRPMDMQQQADEKHRLFA 539 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 D SDFL ++ LW++ EQ + LS + R+LC +L+Y+R+REW D+++QL VV+E+ Sbjct: 540 DPASDFLVWLKLWDWYHEQARHLSRSKLRKLCHDRFLSYIRLREWHDLHSQLLAVVREMK 599 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM 669 + N +PA IH ALL GLLSH+G+ D K++Y GARN RFS+FPGS L KKPPKWV+ Sbjct: 600 MTPNKQPATADAIHRALLAGLLSHVGLYDEKKKQYLGARNLRFSLFPGSALCKKPPKWVI 659 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPI 729 ELVETSRL+GR AA I+P W+E +A HL+ R+YSEPHW R + V A EK+++YG+PI Sbjct: 660 CGELVETSRLFGRTAAVINPAWLEELAPHLVNRSYSEPHWSRKRAQVAAYEKLSLYGIPI 719 Query: 730 VAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDIL 789 +A+R ++Y +DP + RELFIRHALV+ ++ T N +L +E+E LE K RRRD+L Sbjct: 720 IASRLIHYGPVDPVVARELFIRHALVQHEFHTHAKAILHNRRLISELERLEAKQRRRDLL 779 Query: 790 VDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYP 849 +++ +F+F+D I V + + F+ W + ++ P LL ++ L+ A +I +P Sbjct: 780 AEEQVVFDFFDAIIPAHVFTGKLFEQWRLQAEKKQPKLLYLQQQELLHSDAAQIDAAAFP 839 Query: 850 NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKS 909 + + G LKL+ Y F+P ADG+T+ +PLP+L Q++ FEW +PG+ +E ++ LIKS Sbjct: 840 DTFIDGLLKLKYRYHFDPAHKADGITLLVPLPVLGQLDAERFEWLVPGMLQEKLLLLIKS 899 Query: 910 LPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHL 969 LPK +RR+FVPAP++A A + + L+D L REL RMTGVT DWH D +P H+ Sbjct: 900 LPKAMRRHFVPAPDFARAAAENMPFGQGRLIDMLARELGRMTGVTPHHTDWHSDNLPAHM 959 Query: 970 KITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV-ADDGIEQSGLHIWSFGQLPES 1028 ++ F ++D++ K+++ R L+ L+ G + +L AV A +E+SG+ W FG+LP Sbjct: 960 RMQFCLLDEQGKEVESSRDLRALQHKYAGHSRRSLQAVDAVQALERSGITRWDFGELPTV 1019 Query: 1029 YEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK 1088 R +++ +PAL D+ D V+I++F++ E GL RL +L++ ++ L + Sbjct: 1020 VSTLRRGMQLQLFPALQDDGDKVSIRVFESRHEADTITRKGLLRLFMLHLHQQVQMLKKS 1079 Query: 1089 LPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDT 1148 P ++ + + G L DD I+ P +E F E+ R+ + Sbjct: 1080 TPQLQQMSMRYALIGDPSTLKDDLITAAFTAQFMHEPLP-RSESAFNQRLEQGRSRIVAR 1138 Query: 1149 VVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGD 1208 ++A + LTA + L+ + + DI+ Q+ LV GF+ + L Sbjct: 1139 AAELAGHITAALTAHTELITALENSRAAPLKPVVDDIREQIERLVSAGFIADTPAEWLAH 1198 Query: 1209 TLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI---R 1265 R++QA RL K + +D+ L E + + W ++ + + D I R Sbjct: 1199 YPRFIQAATIRLGKAGRNLKQDQ---LHREALSRLWSLYVARRADLEHQQADTSAIDDFR 1255 Query: 1266 WMIEELRVSYFAQQLGTPYPISDKRI 1291 W IEELRVS FAQ L T P+S K++ Sbjct: 1256 WQIEELRVSLFAQDLKTSIPVSLKKL 1281 >UniRef50_C0VVM1 HrpA family ATP-dependent helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVM1_9CORY Length = 1344 Score = 1177 bits (3045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 628/1336 (47%), Positives = 854/1336 (63%), Gaps = 67/1336 (5%) Query: 11 ALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 +L RL S+ ++D RF RL KK + A +AI K++ A ++ + P Sbjct: 14 SLYARLASVRIQDERRFRARL---KKARTDRALEAI----KKDLTHAEKRIAGVTSRIPT 66 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +TYP LPVS++ DI AIRD+QVVI+AGETGSGKTTQ+PKIC+E+GRG +G+IGHTQP Sbjct: 67 VTYPPELPVSRRVDDIAAAIRDNQVVIIAGETGSGKTTQIPKICLEIGRGRRGMIGHTQP 126 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAARTVA RIAEE+ G +GY +RF D V +T VK+MTDGILLAE+Q+DR L Sbjct: 127 RRLAARTVAERIAEEVGQNIGESVGYAIRFDDKVGPHTAVKIMTDGILLAEMQRDRFLNA 186 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN-----AP 245 YDTIIIDEAHERSLNIDF+LGYLK LLP+RPDLK+IITSATIDPERF+RHF + AP Sbjct: 187 YDTIIIDEAHERSLNIDFILGYLKRLLPKRPDLKVIITSATIDPERFARHFADRSGRPAP 246 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTER--DQLQAIFDAVDELSQESHGDILIFMSGEREI 303 IIEVSGRTYPVE+RYRP+VE D E D+L + A++EL QE GDIL F +GER+I Sbjct: 247 IIEVSGRTYPVEIRYRPLVEIHGDKEVAIDELDGLLAALEELMQEGPGDILCFFAGERDI 306 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 RD DA++ ++ E+ PL+ RLSN+EQ+RVF H GRRIVLATN+AETSLTVPGI YV Sbjct: 307 RDALDAISARKFKNVEVTPLFGRLSNAEQHRVFSPHRGRRIVLATNIAETSLTVPGIHYV 366 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 +D G ARISRYS RTKVQRLPIEPISQASANQR GRCGRV+ GI IRLYSE+DF SRPEF Sbjct: 367 VDTGLARISRYSNRTKVQRLPIEPISQASANQRSGRCGRVANGIAIRLYSEEDFASRPEF 426 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS- 482 TDPEI RTNLASVILQM L LGDI FPFV+APD+++I++G++LL ELGAI + Sbjct: 427 TDPEIHRTNLASVILQMALLRLGDIRNFPFVQAPDEKSIRNGIQLLLELGAINEQKPGDE 486 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 + +LT +GRQ++++PVDPRLARM++EA+K + II +AL++QD RERP+DKQQ +D Sbjct: 487 SPRLTAVGRQIARIPVDPRLARMLIEAEKMHVLAPVTIIVAALTLQDVRERPLDKQQQAD 546 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 + H RF DK SD + ++ LW YL + LS N FR+ + +YL+Y+R REW+D+ QL Sbjct: 547 QMHSRFKDKGSDLMGYLALWAYLCSLRSRLSGNQFRKRLQREYLHYMRSREWRDLIRQLV 606 Query: 603 QVVKE-----------------------LGI------------------PVNSEPAEYRE 621 V ++ LG PV++ A + + Sbjct: 607 SVYEDLYWNVDTNALWCEDIPDLTAPPNLGCGEGSQQSKKAAAGAAPLSPVDAAHAYFTD 666 Query: 622 ---IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 IH ALL+GLLSHIG++ D +E++GAR F IFPGSGL KKPP+++M AELV+TSR Sbjct: 667 SDSIHKALLSGLLSHIGVRKGDSKEFSGARGTSFLIFPGSGLAKKPPEFIMAAELVDTSR 726 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYS 738 LW R A I+PEWVE +A HL+KRTYSEP W + + A M EK VYG+PI+A R V Y Sbjct: 727 LWARGVAAINPEWVEGLAPHLLKRTYSEPTWSKKRSAAMVHEKTLVYGVPIIADRLVQYG 786 Query: 739 QIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF 798 +D R++FIRHALV+G+W T H FF EN +V +LE K+RRRDI VDD+TLF F Sbjct: 787 AVDEEAARDMFIRHALVQGEWITHHRFFHENQDKLEQVRDLEEKARRRDITVDDDTLFAF 846 Query: 799 YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLK 858 YD+ + + S F+ WWK+ +++P LL+F+ LI A+ +++ +P+ W QG+L+ Sbjct: 847 YDRILPSHITSEIRFNHWWKRRKQKSPHLLDFDMDKLINPEADTVAEESFPDAWRQGSLE 906 Query: 859 LRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNF 918 LSY FEPG+ DGVTV IPLPLL V+ F WQ+ GLR ELV LI+ LPK RR Sbjct: 907 FELSYHFEPGSPFDGVTVRIPLPLLATVDPEPFTWQVHGLRLELVTELIRCLPKQYRRLL 966 Query: 919 VPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDD 978 VPAP+YA L R+ P E L++ L R + ++ D++ +P H+++TF VD Sbjct: 967 VPAPDYAAKVLPRLIPYEGTLVEQLTSIFRSLGLRNLEETDFNLGSLPPHVQVTFAAVDK 1026 Query: 979 KNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWS---FGQLPESYEQKRGN 1035 + + L+ L++ G+++ ++ A + W+ G +PE+ + + Sbjct: 1027 QGTITDSDKDLRALQNRRSGQIRSSIGKAARSSSSSL-VQSWTKENLGDVPETVDTEVDG 1085 Query: 1036 YKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKL 1095 V A+PALV ++ ++ + +M +L+ + K + + LP + ++ Sbjct: 1086 QTVTAYPALVADQGGFKVQAMPTKAAAEASMVQATMTMLISAVTIGTKSMLKGLPLQQRV 1145 Query: 1096 GLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQ 1155 + P+G LI+D + L+ +GGPV + E F L KV+AE+ V +Q Sbjct: 1146 AVENYPHGGADGLINDARIAAIRDLMLKHGGPVRSPEQFEELKTKVKAEVPSYV----RQ 1201 Query: 1156 VEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQA 1215 L + L+ + + DI+ Q+ +V + V+ G +RL RY+QA Sbjct: 1202 TVTALAPALYEYEALREELTHWDGPAIDDIRKQLDIIVPKNAVSTFGIQRLTHLQRYIQA 1261 Query: 1216 IEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSY 1275 RL+ L P +D + ++ + +N+LP + R + VK+I W+I+ELRVS Sbjct: 1262 ARIRLDDLEAAPQKDEQRQDIIDRLAGQLSSKLNRLPKSARHSKKVKDIIWLIQELRVSL 1321 Query: 1276 FAQQLGTPYPISDKRI 1291 FAQ+LGT +S+K+I Sbjct: 1322 FAQRLGTATKVSEKKI 1337 >UniRef50_D0LBQ9 ATP-dependent helicase HrpA n=2 Tax=Corynebacterineae RepID=D0LBQ9_GORB4 Length = 1324 Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust. Identities = 614/1324 (46%), Positives = 841/1324 (63%), Gaps = 52/1324 (3%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQA------IFQEMAKEIDQAAGKVLLRE 65 L+ + +L + D R RRL + P A ++ + ++ A +V R Sbjct: 17 LRSSMATLTISDEHRLRRRLDKLVGSDKPTASAGESPDSEPWRRLRADVAAAHRRVAKRT 76 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 A+ P +T+P LPVS + +I EAIRDHQVV++AGETGSGKTTQLPKIC+ LGRG++G+I Sbjct: 77 ASVPTLTFPPELPVSAARTEIAEAIRDHQVVVIAGETGSGKTTQLPKICLGLGRGVRGMI 136 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRR+AA +VA RIA+E +T G +GY VRF+D S ++++++MTDGILL EI D Sbjct: 137 GHTQPRRIAASSVARRIADETETTLGDVVGYSVRFTDRSSADSLIRVMTDGILLREIGTD 196 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN-- 243 LL +YDT+IIDEAHERSLNIDF+LGYL+ LLPRRPDLK+IITSATI+PERF+RHF+ Sbjct: 197 PLLRRYDTLIIDEAHERSLNIDFILGYLRRLLPRRPDLKVIITSATIEPERFARHFSTPA 256 Query: 244 --APIIEVSGRTYPVEVRYRPIV-----EEADD------TERDQLQAIFDAVDELSQESH 290 PI+EVSGRTYPV+VRYR + + DD + D Q I A+DEL Sbjct: 257 GEVPILEVSGRTYPVDVRYRALTLRESPDHGDDLGGGEHADLDLFQGIDAAIDELWSTGR 316 Query: 291 GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 GD+L+F+ ER+IRD AD L + EI+PLYARLS ++Q RVF GRRIVLATNV Sbjct: 317 GDVLVFLPTERDIRDAADTLRRRASAGAEIVPLYARLSVADQQRVFAPSDGRRIVLATNV 376 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETS+TVPGI+YV+D GTARISRYS RTKV RLPIEPISQASA QR GRCGRV+ GICIR Sbjct: 377 AETSVTVPGIRYVVDSGTARISRYSTRTKVNRLPIEPISQASARQRAGRCGRVAPGICIR 436 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYSE+DF +RP FTDPEILRTNLA+VILQMT+L LGDIA FPFV PD R I+DG+ +L Sbjct: 437 LYSEEDFDARPAFTDPEILRTNLAAVILQMTSLRLGDIADFPFVAPPDPRAIRDGIAVLT 496 Query: 471 ELGAI-TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 ELGAI D Q+ +LT +GR +++LPVDPR+ARM++ + GC+ +++ +ALS+ D Sbjct: 497 ELGAIEMPDGQSGLPRLTAVGRSMARLPVDPRIARMLIAGHELGCLDHLVVLAAALSLPD 556 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 RERP D ++A+D HRRF SDFL+++ LW+YL E++ LS N FRR+C +YL+YL Sbjct: 557 VRERPSDHREAADAAHRRFAVPNSDFLSYLELWSYLEEKRTELSGNQFRRMCEREYLHYL 616 Query: 590 RVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 R+REW+D+ QLR++V L + IH A+L+GLLS+I ++A+ +E+TGARN Sbjct: 617 RIREWRDLTRQLREIVGNLDWSTARTERDADAIHRAVLSGLLSNIAARNAEGREFTGARN 676 Query: 650 ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHW 709 IFPGSGL KKPP ++M AE++ETSRL+ A IDP W E +A L KRTYSEPHW Sbjct: 677 TTLMIFPGSGLAKKPPSFLMAAEILETSRLFAHTVAGIDPLWAEKLAGPLAKRTYSEPHW 736 Query: 710 ERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFREN 769 +GA MA E+VT+YG+P+VA R+V+Y +IDP RELF+RHALVEGDW T+HAFF N Sbjct: 737 SARRGAAMAYERVTLYGVPLVARRRVDYGRIDPETSRELFLRHALVEGDWHTQHAFFARN 796 Query: 770 LKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLN 829 L ++EHK RR+ +++ ++ LF+FYDQR+ +V SARHFD+WWKK R PDLL+ Sbjct: 797 RALLEAAADVEHKVRRKGLVITEDQLFDFYDQRVGAEVTSARHFDTWWKKTRRTQPDLLD 856 Query: 830 FEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEES 889 ++ + A ++ D+P W QG+ + L Y+F+P A DGVTV IP PLL V + Sbjct: 857 LTPDDVVTDIA--VADTDFPGAWQQGDTRFELRYRFDPTAADDGVTVVIPEPLLAHVRSA 914 Query: 890 GFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRR 949 GF+W +PG R EL AL+K+LPK +R++ PA +A+ L R+ P P++ L REL Sbjct: 915 GFDWSVPGFRSELATALVKTLPKHLRKSMSPAQRFADLALSRLTPRAEPIITGLSRELSA 974 Query: 950 MTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK------DALKGKVQET 1003 +T +TV D+ D++P HL++ F + D + + SL DL+ D+ + ++ Sbjct: 975 ITSMTVSAGDFDTDRLPAHLRVHFALADASGRIVDTDDSLADLQHRHSDTDSHRAPQRQV 1034 Query: 1004 LSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDS------VAIKLFD 1057 +A DGI G L + + ++ +PAL D+ V Sbjct: 1035 YTAWTSDGI----------GTLGDHTRMRVAGQQLTRYPALESVLDAQGRARGVTRTDAS 1084 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGV 1117 NP + + + + LL + IP K + L +L L +PY +L DC + Sbjct: 1085 NPESRDRLVGGAVTTLLEIAIPPLTKKIVGGLDAGGRLALSQSPYRHGEDLFADCTRRAI 1144 Query: 1118 DKLIDANG--GPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 L + T E F AL +++R ++ + L AV + + Sbjct: 1145 RDLAAQRPAIAAIRTPEDFHALRDELRPLVSTAAPEYFALAVDALRAVAPLRTLIDRHAG 1204 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 A D+ Q+ L++ GFV + L + RYL + RLE L RDRA + Sbjct: 1205 SVAA---DDVAEQLDHLIFDGFVRATPRRHLAELGRYLLGAQTRLEGLPASADRDRAGVA 1261 Query: 1236 KVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 ++ V Q W Q + ++P RR D +E +W++EELRV FAQ+LGT YP+S+KR L+ + Sbjct: 1262 IIDRVTQRWNQRLAQVPENRR-DAVNEEAQWLVEELRVGVFAQRLGTAYPVSEKRALRTL 1320 Query: 1296 EQIS 1299 +++ Sbjct: 1321 DRLG 1324 >UniRef50_A6VYA9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=A6VYA9_MARMS Length = 1308 Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/1241 (47%), Positives = 829/1241 (66%), Gaps = 25/1241 (2%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R++ P++TY ++LPV+ + +I++AI+D+QVVI+AGETGSGKTTQLPK+C++ GRGI G Sbjct: 69 RQSRMPKVTYDESLPVATRADEIIKAIQDNQVVIIAGETGSGKTTQLPKMCLQAGRGIAG 128 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRR+AAR+VA RI++EL+ G +G++VRFSD ++ T++KLMTDGILLAEIQ Sbjct: 129 LIGHTQPRRIAARSVAERISDELQVNLGEQVGFQVRFSDESNEETLIKLMTDGILLAEIQ 188 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 QD+ L +YDTIIIDEAHERSLNIDFLLGYLK++L RPDLK+I+TSATID ERFS HF N Sbjct: 189 QDKRLYKYDTIIIDEAHERSLNIDFLLGYLKQVLAARPDLKVIVTSATIDVERFSEHFEN 248 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQA----IFDAVDELSQESH-------GD 292 APIIEVSGRTYPVE+RY+P++ ++D E D+ Q+ I DAV+ L E GD Sbjct: 249 APIIEVSGRTYPVEIRYQPLLSKSDSEELDEDQSMEQGILDAVELLIAEERQSGYRGAGD 308 Query: 293 ILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAE 352 IL+F+ GEREIRDTA+ L + LR TE+LPLYARLS SEQ R+F+SHSGRRIVL+TNVAE Sbjct: 309 ILVFLPGEREIRDTAEILRRAELRSTEVLPLYARLSASEQQRIFKSHSGRRIVLSTNVAE 368 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TSLTVPGI+YVIDPG ARISRYS R+KVQ+LPIE ISQASANQR GRCGRV++GICIRLY Sbjct: 369 TSLTVPGIRYVIDPGLARISRYSVRSKVQQLPIEKISQASANQRAGRCGRVADGICIRLY 428 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 E+DF +RPEFTDPEI RTNLASVILQM L LG + FPFVE P+KR I DG R L EL Sbjct: 429 DEEDFNNRPEFTDPEIFRTNLASVILQMANLKLGAVEKFPFVEMPEKRMINDGYRALTEL 488 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 GA+ + +LTP+GRQL++LP+DP+L R+++ A++H ++E II SALSI DPRE Sbjct: 489 GALHKE------RLTPIGRQLAKLPIDPKLGRILIAAEQHSVLKEVAIIVSALSIADPRE 542 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP DK+ SD+ H D++SDFL F+NLW EQ++ALS N R+ CR +LN++R+R Sbjct: 543 RPQDKKTQSDQAHAVDKDEDSDFLVFLNLWERFEEQRQALSQNQLRQYCRKQFLNFMRMR 602 Query: 593 EWQDIYTQLRQVVKELGIP-VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 EW+DI+ Q+ K+LG V E Y IH ALL G+ + + K D +E G R+ + Sbjct: 603 EWRDIHRQIMIACKQLGFKEVQHEERHYEAIHRALLAGMFTQVANKMEDSKEMLGCRSRK 662 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 +IFPGS LFKKPP+W+M AEL+ETS+L+ R+ ARIDP W+E A +KR Y +PH+ER Sbjct: 663 LAIFPGSMLFKKPPQWIMAAELIETSKLYARVTARIDPAWIEEYAAPFVKRQYFDPHFER 722 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLK 771 QG VMA E+V++YGL IVA R+++Y + P RE+FIR LVEG+ +T+ AFFR+N Sbjct: 723 NQGRVMANEQVSLYGLIIVAKRRIDYGHVHPEDAREIFIRSGLVEGELRTKQAFFRKNKA 782 Query: 772 LRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFE 831 L +E E K R+RDILVDDET+F FY+ R+ V + + + + K +PD L Sbjct: 783 LMELLEAQEAKLRKRDILVDDETVFAFYNSRLPDHVRNLKSLEHFVKT----SPDALLMT 838 Query: 832 KSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGF 891 + LI + + +P+ + + L + Y+F+PG ADG T+ +P+ LL Q+ Sbjct: 839 REDLINQDV-SVDDQAFPDSFGLNGVALPIDYKFDPGQAADGATLKVPVGLLRQLSLEDL 897 Query: 892 EWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMT 951 W +PG +E AL+++LPK +RR FVP P + + + + LL+ L +++R T Sbjct: 898 GWAVPGFIKERCEALLRALPKALRRRFVPIPQFVDRIYPNLSKDKGDLLEQLSLQIKRET 957 Query: 952 GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDG 1011 + + +W+ D++ HL + VVD++ K L G++L L+ V+E+ + Sbjct: 958 LIDIPLNEWNADKLDSHLTLNLEVVDERGKVLGVGKNLAQLQTQFSDLVEESFAKFGTKQ 1017 Query: 1012 IEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLR 1071 EQ GL W +PE E K+ KV A+PALV + D V++K+FD+ + G+ Sbjct: 1018 HEQEGLTSWPEQGIPERQEIKQAGIKVTAFPALVAQGDHVSLKMFDDQNTALETHRKGVV 1077 Query: 1072 RLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL-IDANGGPVWT 1130 LL L + ++YL + LP+ + L F+P G+ L+DD ++ +DK+ +D P T Sbjct: 1078 TLLKLTLSKEMRYLQKNLPHLKESMLIFSPLGQKETLLDDLLNAVLDKVFLDGRALP-RT 1136 Query: 1131 EEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMG 1190 + F + K + +L D+A Q+ ++L++ + KR+KG + + DIK Q+ Sbjct: 1137 KAEFESCLVKNKPQLVSVANDMAGQLYRVLSSYQGVAKRMKGSIPLPWTRIYGDIKVQLE 1196 Query: 1191 GLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINK 1250 L+Y GF+ LG RY + IE RLE+ +++ + ++E + Q + + Sbjct: 1197 QLIYPGFIGNTPLFWLGQLPRYFKGIEVRLERFQNHLNKENQYVSELEILWQTYSRQKKA 1256 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 D ++ + RWM+EE R+S FAQ +GT PIS+KR+ Sbjct: 1257 HDEKALYDPELIKYRWMLEEYRISLFAQSVGTLEPISEKRL 1297 >UniRef50_B9Z2A4 ATP-dependent helicase HrpA n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2A4_9NEIS Length = 1314 Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 608/1319 (46%), Positives = 861/1319 (65%), Gaps = 45/1319 (3%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 L+ L S ++RDR R+L V +++K + ++A++I ++ G+ R A P+ Sbjct: 10 LKAALPSCLIRDRHGLKRKLADVEQRLKKQQPTDKLLADVAQQIARSQGRAEARSANLPK 69 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 + LPV+QK+++I AI HQVVI+ GETGSGKTTQ+PKIC+ELGRG+ GLIGHTQP Sbjct: 70 PEFDLALPVNQKREEIRAAIAKHQVVIICGETGSGKTTQIPKICLELGRGVYGLIGHTQP 129 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAAR+VA RIA+EL +E G +G+KVRF+D +SD +++KLMTDGILLAE Q DR L Sbjct: 130 RRLAARSVATRIAQELGSELGAHVGFKVRFTDKLSDKSVIKLMTDGILLAETQTDRYLEA 189 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTIIIDEAHERSLNIDFLLGYLK++LPRRPDLK+I+TSATID ERF+RHF+ AP+IEVS Sbjct: 190 YDTIIIDEAHERSLNIDFLLGYLKQMLPRRPDLKVIVTSATIDAERFARHFDGAPVIEVS 249 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDTADA 309 GRT+PVEVRYRP+ E +D +++ AI DAVDE+S+ GD+L+F+ GEREIRDTA+ Sbjct: 250 GRTFPVEVRYRPLKERDEDEREVEMEDAIVDAVDEISRHGPGDMLVFLPGEREIRDTAEK 309 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTA 369 L K +R EILPL+ARLSN +Q ++F+ GRRIVLATNVAETSLTVPGIKYVID G A Sbjct: 310 LRKSGIRGYEILPLFARLSNEDQQKIFKPSGGRRIVLATNVAETSLTVPGIKYVIDTGLA 369 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 R++RYS R KV++L +E ISQA+A QR GRCGRV G+C+RLY EDDF +RP FTDPEI+ Sbjct: 370 RLNRYSPRAKVEQLQVEKISQAAARQRAGRCGRVEAGVCVRLYGEDDFNARPAFTDPEIV 429 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 R+NLA+VIL+M AL LG + FPF+EAP R I DG ++L ELGA+ DE++ +LTP+ Sbjct: 430 RSNLAAVILRMAALRLGRVDDFPFLEAPSSRLIADGYQVLTELGAV--DEKS---ELTPV 484 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 G++L++LP+DP++ RM+L A+ GCVRE +II +ALSIQDPRERP + ++A++ ++F Sbjct: 485 GKELARLPIDPKIGRMLLAARDLGCVREVLIIAAALSIQDPRERPFEAREAAERAQQKFA 544 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSN-AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 D++SDFL+F++LW++ + K SN LC +L+YLR+REW++++ QL ++ E+ Sbjct: 545 DEKSDFLSFLHLWDFFQDALKHKKSNRQLINLCHEHFLSYLRMREWRELHGQLAEIAAEM 604 Query: 609 GI------PVNSEPAE-----------------YREIHIALLTGLLSHIGMKDADKQEYT 645 G+ ++EP+ Y +H ALLTGL+ ++GMK + +Y Sbjct: 605 GLIQRHEAHADAEPSANLEQLSVKKRQQLDAVAYERLHQALLTGLIGNLGMKSQESDDYL 664 Query: 646 GARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 G R F +FPGSGL K PKW++ AELVET++L+ R +++PEWVE +A HLIK Y Sbjct: 665 GTRGVHFHVFPGSGLKKAKPKWLVAAELVETTKLYARCVGKVEPEWVEKLAPHLIKYHYF 724 Query: 706 EPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAF 765 +PHWE+ +G V+A+E+VT+YGL +V R V+Y +I P RELFIR ALV ++ + + Sbjct: 725 DPHWEKTRGEVVASERVTLYGLTLVPRRPVSYGRIAPEEARELFIRGALVAMEYASNAPW 784 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 F+ N +L EVE+LEHK+RR+D+LVD++ LF FY +RI V+ A F++W K+ + P Sbjct: 785 FQRNQQLIREVEQLEHKARRQDVLVDEDALFAFYAERIPAHVVDAASFEAWRKEAEQADP 844 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 L + L++ A+ ++ +P + + KLRL Y+FEP DGVTV +PL +LN+ Sbjct: 845 KRLFLTREELMRHAAQHVTVNQFPEWLEHEDGKLRLKYRFEPNHPLDGVTVDVPLAILNR 904 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLER 945 +E + FEW +PG+ RE + +IKSLPK VRR VP P++ FL P+ L R Sbjct: 905 LEPAPFEWLVPGMIREKLQLMIKSLPKQVRRTCVPVPDFVTRFLSANPDTTQPIAPQLAR 964 Query: 946 ELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETL 1004 + R T GV V +D+ +P HL FRV+DD +++ GR L L+ Q T Sbjct: 965 FILRETGGVKVAVDDFDLATLPAHLLFNFRVIDDGKQEIGLGRDLLALQKQFGQAAQLTF 1024 Query: 1005 SAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQ 1064 + + E+ + W FG+LP + + RG ++ +PAL E D VAI+L+D ++ Sbjct: 1025 RDTSAE-FERDDVTSWDFGELPAAIQFARGRQQLTGYPALTLETDKVAIRLYDTEYAAQR 1083 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 A G+ RLL L + +K L + LP +LGL + +L+ D I+C D+ + Sbjct: 1084 AHRQGVVRLLQLQLKEQMKQLGKGLPGMTQLGLQLRGVANIDDLLADAIACICDRAFIGD 1143 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 P TE+ F + R L + + + QI + +L LG + Sbjct: 1144 DEPPRTEKAFNDQKARARTRLPAVIQAVTAYLNQIAGEYQALQPKL-----AKHKLG-RE 1197 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 + Q+G LVY+GF++ + +L RYL+A+ R++K + RD + ++Q W Sbjct: 1198 LTEQLGRLVYKGFLSATPWSQLPHLPRYLKAMSLRMDKQVANAQRDGQ---RAAEIRQLW 1254 Query: 1245 QQWINKLPPARREDE---DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 W +L A + E + E RW IEELRVS FAQ+L TPYP+S KR+++ E ISG Sbjct: 1255 TLWETRLAEAEDKGEATPALAEFRWKIEELRVSLFAQELKTPYPVSLKRLMKEWESISG 1313 >UniRef50_Q0A864 ATP-dependent helicase HrpA n=9 Tax=Gammaproteobacteria RepID=Q0A864_ALHEH Length = 1341 Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 622/1332 (46%), Positives = 859/1332 (64%), Gaps = 51/1332 (3%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 L+ R+D R +RL G+ ++ + ++ ++I A + R A P Sbjct: 17 LRPRIDRAFGPARPALRKRLAGLERRAHDGKPFDKGLVKLERDIAVACQRAETRAANLPS 76 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 + +LPV+Q+ D+ EAIRDHQVV++ G TGSGK+TQ+PKICM LGRG+ G IGHTQP Sbjct: 77 PRFDPSLPVNQRLDDLREAIRDHQVVVICGATGSGKSTQIPKICMALGRGVHGWIGHTQP 136 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAART+A RI++EL T G +GYKVRF+D VS+ T +KL+TDG+LLAEIQ+DR L Sbjct: 137 RRLAARTLAQRISDELGTALGEAVGYKVRFTDQVSERTHLKLLTDGMLLAEIQRDRHLDA 196 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+IITSATIDPERFS+HF+ API+EVS Sbjct: 197 YDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVIITSATIDPERFSKHFDEAPILEVS 256 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADA 309 GRTYPVEVRYRP+V++ D+ + D A+ +AV EL++E GD+L+F+SGEREIR+ +A Sbjct: 257 GRTYPVEVRYRPMVDDEDERDEDLPGAVVEAVHELAREPGQGDVLVFLSGEREIRECTEA 316 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSH-SGRRIVLATNVAETSLTVPGIKYVIDPGT 368 L K + HTE+LPLYARLS +EQ RVF GRR+VLATNVAETS+TVPGI+YV+D G Sbjct: 317 LRKKHPPHTEVLPLYARLSAAEQQRVFNPKGGGRRVVLATNVAETSVTVPGIRYVVDSGY 376 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 ARI+RYSYRTKV RLPIEPISQASANQR GRCGR + G+ IRLYSE+DF R FTDPEI Sbjct: 377 ARINRYSYRTKVSRLPIEPISQASANQRAGRCGREAPGVAIRLYSEEDFAGRSAFTDPEI 436 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 RTNLA+VILQM ALGLGDI FPFVE P+ + + DG +LL ELGA+T D + LT Sbjct: 437 QRTNLAAVILQMKALGLGDIQRFPFVEPPEHKFVNDGFKLLHELGAVTEDRE-----LTA 491 Query: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548 LGRQL++LP+DP + RM+L A++ G + E ++I +ALS+QDPRERP+D QQA+D+ H ++ Sbjct: 492 LGRQLARLPLDPPVGRMLLAAREQGVLDEVLVIAAALSVQDPRERPLDAQQAADQAHAQW 551 Query: 549 HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 +SDFL+ V LW Q++ LS+ R+ CR +L+ R+REW DI+ Q+R++V L Sbjct: 552 RHGKSDFLSLVLLWQDYHRQKRRLSNRQLRQWCRERFLSPHRMREWLDIHRQIRELVSGL 611 Query: 609 -------------GIPVNSEPAE-------------------------YREIHIALLTGL 630 G P+ S +E Y +H ALL GL Sbjct: 612 SGGADRKGAGGGPGRPLRSTGSEGAAASPLARPHTVTTEQCAEWLDTHYEALHRALLAGL 671 Query: 631 LSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPE 690 +S+I +K EY G R + IFPGSG FK+ PKW++ AE VETSRL+ R AA + PE Sbjct: 672 VSNIAQHHENK-EYLGPRGVKLMIFPGSGQFKRNPKWIVAAEFVETSRLFARTAAEVKPE 730 Query: 691 WVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI 750 W+E A HL+ R+Y+EPHWE+ V A EKVT+YGL + + R+VNY IDP + R +FI Sbjct: 731 WIEQTAAHLVSRSYAEPHWEKKPAQVAAYEKVTLYGLVLASQRRVNYGPIDPPVARAIFI 790 Query: 751 RHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISA 810 R ALV+G+++TR F+ N +L E+E LE K+RRRD+LVD+ET F FYDQRI + S Sbjct: 791 REALVQGEYRTRAPFWEHNRRLIEEIERLEAKARRRDVLVDEETRFRFYDQRIPEGIYSG 850 Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWH-QGNLKLRLSYQFEPGA 869 F+ W +VSR+ P L+ + L+++ A+ +S YP+ G L+L L Y EPG+ Sbjct: 851 AAFERWLGEVSRDDPKRLHMSREALMRDDADPVSGEAYPDRLRLPGGLELPLEYHLEPGS 910 Query: 870 DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL 929 + DGV +P+ LNQ+ FEW +PGL E V+ALI+ LPK +RRNFVPAP++A A L Sbjct: 911 ELDGVVARVPVAALNQLRPEPFEWLVPGLVHEKVVALIRGLPKAIRRNFVPAPDFARAVL 970 Query: 930 GRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSL 989 + E L D++ R+L+RMTGV + +P+HL++ +RV+D++ L+ G L Sbjct: 971 EAIPHGEGSLTDAVARQLKRMTGVDIPPGALDAVALPEHLRMHYRVLDEQGNTLRTGSDL 1030 Query: 990 QDLKDALKGKVQETLSAVADDGIE--QSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDE 1047 L+ L + E+ SA E + G+ W FG LPE+ E R ++ +P LVDE Sbjct: 1031 AALQQGLGDQASESFSASGGGASEWTREGITTWDFGDLPEAVEIGRNGLTIRGYPCLVDE 1090 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 SV + L D+P E ++ G+RRL +L +P ++YL LP +L L + G + Sbjct: 1091 ESSVRLTLADSPDEAERQHRAGVRRLYMLALPQQVRYLRRGLPGLDRLRLAYRGLGSDED 1150 Query: 1108 LIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNIN 1167 L + + VD+ + P TE F E+ R L + +A+ +E++L I Sbjct: 1151 LKRELVHAAVDRTFLGDAPPR-TEAAFRQRLERGRPRLVENAQRLAEGLEEVLGRYQAIR 1209 Query: 1168 KRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDP 1227 K LK + + L D++ + LVY GF+ + L + RYL+A+E+R+EKL DP Sbjct: 1210 KALKQFNALALMDSLKDLQEHLECLVYPGFLQQTPPEYLAELPRYLRALERRVEKLRQDP 1269 Query: 1228 HRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 RDR + + + W++ ++ + D ++ RW++EE RVS FAQ++G +S Sbjct: 1270 GRDRTPLRSIRPWWERWRERQSRREAQGKPDPALERFRWLLEEYRVSLFAQEVGAREKVS 1329 Query: 1288 DKRILQAMEQIS 1299 +KR+ A ++++ Sbjct: 1330 EKRLKAAWKEVA 1341 >UniRef50_C5BR02 ATP-dependent helicase HrpA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR02_TERTT Length = 1353 Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust. Identities = 609/1299 (46%), Positives = 835/1299 (64%), Gaps = 71/1299 (5%) Query: 50 MAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQ 109 + +D A ++ R P ++ D LP+S K+ +I I +QVVI+AGETGSGKTTQ Sbjct: 56 LTDRLDAALARIAERTRNAPTPSFDDALPISAKRDEIKSLIEANQVVILAGETGSGKTTQ 115 Query: 110 LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM 169 LPKIC+ELGRG++G+IGHTQPRR+AARTVA+RIA+EL+ + G +GY+VRF+DH + T Sbjct: 116 LPKICLELGRGLRGMIGHTQPRRIAARTVASRIADELQVQLGSEVGYQVRFTDHSNSATH 175 Query: 170 VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITS 229 +KLMTDGILLAEIQQD LL +YDT+IIDEAHERSLNIDFLLGYLK +L +RPDLK+I+TS Sbjct: 176 IKLMTDGILLAEIQQDPLLYKYDTLIIDEAHERSLNIDFLLGYLKGVLKQRPDLKLIVTS 235 Query: 230 ATIDPERFSRHFNN-----APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDE 284 ATID ++F+ HF++ AP+IEVSGRTYPVE YRP DD +D +AI A++E Sbjct: 236 ATIDLQKFAAHFSDQDGKPAPVIEVSGRTYPVETLYRPW----DDDYQDINEAIVGAIEE 291 Query: 285 ---LSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG 341 + +S GDIL+F+SGEREIR+ + A+ K + RH EILPLYARLS +EQNRVFQ+H G Sbjct: 292 ILTMPHKSDGDILVFLSGEREIREASHAIKKADFRHLEILPLYARLSLAEQNRVFQAHRG 351 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 RR+VLATNVAETSLTVPGI YVIDPG ARISRYS RTKVQRLPIE ISQASANQRKGRCG Sbjct: 352 RRVVLATNVAETSLTVPGIGYVIDPGRARISRYSVRTKVQRLPIEAISQASANQRKGRCG 411 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 RVS G+CIRLY E DFL RPEFTDPEI RTNLA+V+LQM L +GD+ F FV+ P+ R Sbjct: 412 RVSNGVCIRLYDEADFLGRPEFTDPEIQRTNLAAVVLQMLQLRIGDVRKFDFVDRPENRL 471 Query: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 I DG +LLEE+ A+ D + K+T LGRQL LP+DPR AR++L +H C+RE +II Sbjct: 472 INDGFKLLEEIQAV--DRKG---KITALGRQLYSLPLDPRFARIILAGAEHNCLREILII 526 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 S LSIQDPR+RP +K+QA+DEKHRRF D+ SDFL F NLWNY+ EQ++ LS N ++LC Sbjct: 527 VSGLSIQDPRDRPAEKRQAADEKHRRFWDENSDFLGFYNLWNYIEEQRQELSQNQLQKLC 586 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD--- 638 + +++NYLRVREW+D++ QLR +K LG+ N++PA Y +H AL+ GLLS++G+K Sbjct: 587 KKEFINYLRVREWRDLHHQLRLAIKGLGLKENADPANYENVHRALVVGLLSNLGLKQEEA 646 Query: 639 ---ADKQE---------YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAAR 686 +K+E Y G+RN RF IFPGS FKK PKW+ AE +ET++L+ +AA+ Sbjct: 647 AKPGNKKEGGRPQQAFSYHGSRNRRFQIFPGSSQFKKRPKWLAAAEFIETTQLYAHMAAK 706 Query: 687 IDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCR 746 ++P W A+HL+K Y EP ++ QG VMA +++T++GLP+V ++V YS+++ R Sbjct: 707 VEPLWALDAAEHLVKHHYHEPFYDATQGQVMAYDRITLFGLPLVEKQRVQYSKVNREESR 766 Query: 747 ELFIRHALVEG-----------------DWQTRHA-----------FFRENLKLRAEVEE 778 E+FIR ALVEG +WQ + FF N L A VE Sbjct: 767 EVFIRQALVEGHYWRNKRTKKAVETARVNWQKANQYGAGDLASIDHFFVYNEALSARVES 826 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE KSRRRDILVDD+ +F+FYD + D+ + F+ W K+ LL ++ L+ Sbjct: 827 LEAKSRRRDILVDDQVVFDFYDAVLPADIANLASFEHWRKQEEMTNAQLLRMDQESLMLH 886 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 A I+ +P+ + L L Y FEPG DGV+V +P+ L+ V ES +W +PGL Sbjct: 887 SAGDITGAQFPDAIELDGVTLPLRYHFEPGDPDDGVSVCVPVDFLHMVPESRLQWLVPGL 946 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958 RE IAL+K+LPKP+R+ VP P + + L R+ P+ PL +L E R + + + + Sbjct: 947 LREKCIALVKALPKPLRKQLVPVPQFVDRALARLAPVNQPLTTALAAEFRHLANIEIPDD 1006 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 W ++ ++ +VVDD+ + R + LK+ + +V+++LS A+ +E++ + Sbjct: 1007 AWQTGELDPFYRMNIQVVDDRGAVIDRSRDIVSLKEQYRSQVKKSLSQ-ANHALERNDIA 1065 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 W FG+LP R +VK +PALVD + V + + DNPL+ ++ G RL L + Sbjct: 1066 QWDFGELPSQVTIPRNGVEVKGFPALVDMANHVKLTVVDNPLDARRETRRGTLRLAALEL 1125 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALH 1138 +KYL ++L LGL G ++I+D I + + V ++ F A Sbjct: 1126 SQTVKYLSKQLLKGRDLGLAVLDIGTRDQVIEDIIFAAIQRACFNEQPWVADQQAFKAKL 1185 Query: 1139 EKVRAELNDTVVDIAKQVEQILTAVFNINKRLK-----GRVDMTMALGLSDIKAQMGGLV 1193 + R+EL V IA++ E +L +++ +K + + +A DI+ Q L Sbjct: 1186 DHGRSEL----VTIAQEYEAVLAECLSLSISIKKAMKSNKNALLLAFTFGDIQHQFQQLF 1241 Query: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPP 1253 GF++ ++ L RYLQAI R+EK +P RDR Q +E Q + + K+ Sbjct: 1242 AAGFMSDTPWQWLQHYPRYLQAILVRMEKAPQNPQRDRVQCAALETHWQRHEDLLRKVGH 1301 Query: 1254 ARREDEDV-KEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +E RWM+EELRVS FAQ L T P+SDKR+ Sbjct: 1302 GHYTSSPAWQEYRWMMEELRVSLFAQTLKTLMPVSDKRL 1340 >UniRef50_C8RTL0 ATP-dependent helicase n=4 Tax=cellular organisms RepID=C8RTL0_CORJE Length = 1325 Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust. Identities = 606/1296 (46%), Positives = 837/1296 (64%), Gaps = 80/1296 (6%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P I+YPD LPVS++++DI +AI D+QVVI+AGETGSGKTTQ+PK+C+ELGRG +IGHT Sbjct: 43 PPISYPD-LPVSERREDIKQAIEDNQVVIIAGETGSGKTTQIPKMCLELGRGRTKVIGHT 101 Query: 129 QPRRLAARTVANRIAEELKTEPG---GCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 QPRR+AAR+VA RIAEEL E G +GYK+RF D +S +T VKLMTDG+LL EIQ+D Sbjct: 102 QPRRIAARSVAERIAEELDQEIGDDTSLVGYKIRFDDTISKHTAVKLMTDGVLLNEIQRD 161 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA- 244 RLL YDTII+DEAHERSLNIDFLLGYLK+LLP+RPDLK+IITSATIDPE F++HF +A Sbjct: 162 RLLRDYDTIIVDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSATIDPESFAKHFADAN 221 Query: 245 ----PIIEVSGRTYPVEVRYRPIVEEADD--------TERDQLQAIFDAVDELSQESHGD 292 PIIEVSGRTYPVE+RYRP+V E ++ E D L + A EL + GD Sbjct: 222 GSPAPIIEVSGRTYPVEIRYRPLVTERENPKTGEVIEVETDPLDGLVGACRELMRAGDGD 281 Query: 293 ILIFMSGEREIRDTADAL-----NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 IL F SGEREIRD A+AL R ++LPL+ RLSN+EQ+RVF + RRIVLA Sbjct: 282 ILCFFSGEREIRDAAEALEGEFAGAGGARKVDVLPLFGRLSNAEQHRVFHTGPRRRIVLA 341 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETSLTVPGI YV+D G ARISRYS RTKVQRLP+EPISQASA QR GR GR+++GI Sbjct: 342 TNIAETSLTVPGIHYVVDTGYARISRYSNRTKVQRLPVEPISQASAKQRSGRSGRIADGI 401 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 IRLYSE+DF +RPEFTDPEILRT+L+SVIL M ALGLGDI FPF++APD ++I+DGV Sbjct: 402 AIRLYSEEDFEARPEFTDPEILRTHLSSVILSMAALGLGDIERFPFLQAPDSKSIRDGVA 461 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL+ELGA+ + ++A+ LTP+GR ++++P DPRLARM++ + + +I SALSI Sbjct: 462 LLQELGALASTKEAA---LTPIGRDMARIPTDPRLARMLVAGHANNIIEPIAVIVSALSI 518 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 QD RERP++KQQ +DE H RF SDF++ + LWNYL EQ++ LS+N FRRLC+ ++++ Sbjct: 519 QDVRERPLEKQQQADEMHARFK-ANSDFVSLLKLWNYLQEQRQELSANKFRRLCQREFIH 577 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNS---------EPAEYRE--IHIALLTGLLSHIGM 636 Y+RVREW D+ Q+ VV++L + + EP E +H ++LTGLL+H+GM Sbjct: 578 YVRVREWMDLVRQMLSVVQDLSWKIPNIRHVRELVFEPEAIDEDLVHQSILTGLLTHVGM 637 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 ++ + +++TG R + F + P S + KKPP+W+M AELVETS+++ R IDP W+E +A Sbjct: 638 REGNSKQFTGTRGSHFVVHPSSHVSKKPPQWLMAAELVETSQVFARTVGPIDPSWIETIA 697 Query: 697 QHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVE 756 H++K YSEP W ++GA M EKV + GLPIVA R VN S++D AL RELFIRHALVE Sbjct: 698 PHMVKYNYSEPVWSSSRGAAMVHEKVLLLGLPIVADRMVNASKVDRALARELFIRHALVE 757 Query: 757 GDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSW 816 GDW+TRH FF N KL +E ELE K+RRRDI+VDD+TLF+FYD R+ ++S+RHFDSW Sbjct: 758 GDWKTRHHFFAHNQKLLSEATELEDKARRRDIVVDDQTLFDFYDARLPEKIVSSRHFDSW 817 Query: 817 WKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTV 876 WKK + P L+F LI + ++P+ W QG+L+ LSY F PG DG+T+ Sbjct: 818 WKKARHKDPHQLDFTLDALIDSEEAAKAADEFPDVWRQGSLEFELSYVFLPGDPDDGMTM 877 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE 936 +P+PLL V E W + G+R EL IALI+SLPKP+R + VPA N+A A L R+ P + Sbjct: 878 RVPIPLLANVSEPETRWLVAGMREELAIALIRSLPKPLRTSVVPASNFASAALKRMVPFD 937 Query: 937 LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 +L LR + G + +D+ W +VP HL++ F +D + +++ R L+ L++ L Sbjct: 938 GEFGFALAEALRELGGQGISAQDFDWSRVPGHLRMQFAAIDRRGNVIEKSRDLKYLQNKL 997 Query: 997 KGKVQETLS--------AVADDGIE-----------QSGLHI--------WS---FGQLP 1026 G+V ++ A D + Q+G W+ G LP Sbjct: 998 AGQVTSAIAQAAARSKGAAPSDAAQHTPSRRKASKKQAGTSTGVLATADAWTADGIGVLP 1057 Query: 1027 ESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLH 1086 E+ E + +PA+V +D V +K F + + +++ K + Sbjct: 1058 ETVETVVDGQTLNTYPAIVATQDRVTLKAFPTKQAADGQQFTTVLNMMVAACTVSPKQMI 1117 Query: 1087 EKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANG----GPVWTEEGFAALHEKVR 1142 + LP + ++ + P G V L++D ++ ++ G P +E A H + Sbjct: 1118 KGLPLRQRVAMENTP-GGVDGLVNDVVALACRDMLMKLGPVIRDPDKCDEVVAVAHSQGP 1176 Query: 1143 AELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNG 1202 V + + AV +++ LKG + D+ AQ+ + + + NG Sbjct: 1177 GR----VRQYVVALAPAVLAVADMSAELKG----WSGEAIDDMHAQLNFFLGKHAIARNG 1228 Query: 1203 FKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK 1262 + + RY++A+ RLE + DP+++ +V+ + ++ +LP AR +K Sbjct: 1229 IEHMRHVPRYVEAMRARLELMKADPYKEEDLDQEVQEAFELLEKTKKRLPTARAASPQIK 1288 Query: 1263 EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 E+RWMIEELRVS FAQ LGT + +S +RI + +E+I Sbjct: 1289 EVRWMIEELRVSLFAQNLGTAHSVSLQRIRKKLEKI 1324 >UniRef50_A4VNQ0 ATP-dependent helicase HrpA n=32 Tax=Proteobacteria RepID=A4VNQ0_PSEU5 Length = 1425 Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 633/1357 (46%), Positives = 845/1357 (62%), Gaps = 81/1357 (5%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI 71 L + LD + DR R R+LH ++K PD +A + + +A KV R + P I Sbjct: 78 LLKNLDQALFADRHRLRRQLHELRK--QPD--EARLAQWLERFQASAAKVEARRQSVPRI 133 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 Y D+LP++ K+ +I A+ HQV+++AGETGSGKTTQLPKIC+E+GRG+ GLIGHTQPR Sbjct: 134 RYDDSLPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLIGHTQPR 193 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 RLAAR+VA R+AEEL G +GY+VRF D ++ T++KLMTDGILLAE Q DR L +Y Sbjct: 194 RLAARSVATRVAEELGAPLGELVGYQVRFEDQSTERTLIKLMTDGILLAETQHDRFLEKY 253 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 DTII+DEAHERSLNIDFLLG+LK LLPRRPDLK+IITSATID ERFS HF+ API+EVSG Sbjct: 254 DTIIVDEAHERSLNIDFLLGFLKTLLPRRPDLKVIITSATIDLERFSEHFDGAPIVEVSG 313 Query: 252 RTYPVEVRYRPIVEEAD-DTER--DQL---QAIFDAVDELSQESH------GDILIFMSG 299 RTYPVE YRP+ E D D R D L Q I A+DE++ GD+L+F+ G Sbjct: 314 RTYPVETWYRPLAAEIDEDGNRVEDDLTVDQGILAALDEIAAHERSVGQRPGDVLVFLPG 373 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 EREIRD A+ L K NL+ TE+LPLYARL+ +EQ ++FQ GR+IVLATNVAETSLTVPG Sbjct: 374 EREIRDAAEVLRKANLKFTEVLPLYARLTPAEQQKIFQPRPGRKIVLATNVAETSLTVPG 433 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I+YVID GTARISRYSYR KVQRLPIE +SQASANQRKGRCGRV GICIRLYSE+DFL Sbjct: 434 IRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYSEEDFLG 493 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 RP FTDPEILRTNLA+VILQM L LGDI FPF+E PD + I DG LL+EL A+ + Sbjct: 494 RPAFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELSAVNREN 553 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 Q LTPLGRQL++LP+DPRL RM+LEA + G + E +I+ SALS+QD RERP D+QQ Sbjct: 554 Q-----LTPLGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDVRERPADRQQ 608 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 A+D+ H ++ D +SDF A +NLW EQ++AL SNA R CR ++LNYLR+REW+D + Sbjct: 609 AADQAHAQWKDPDSDFAALINLWRGFEEQRQALGSNALRSWCRKNFLNYLRLREWRDAHR 668 Query: 600 QLRQVVKE--LGIPVN-------------------------------------------- 613 QL + +E LG P + Sbjct: 669 QLTLIARELKLGAPADSRGQGRPQKGEARGSALDRGTTAAAPSAEAPAPTKDNKVNAIVR 728 Query: 614 -----SEPAEYREIHIALLTGLL----SHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 SE A+ + + A+ +L S IG K ++ ++ GAR RF + PGS + +K Sbjct: 729 QQVEASEAAQKAKSYAAVHKAILAGLLSQIGNK-TEEGDFLGARQRRFWVHPGSSIGRKK 787 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTV 724 P W+M AELVET++L+ R+ A+I+P+W+EP+A HL+K+ + EPHWE+ +G V+A E+VT+ Sbjct: 788 PNWLMAAELVETTKLFARMVAKIEPDWIEPLAGHLVKKNHFEPHWEKKRGQVVAYEQVTL 847 Query: 725 YGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSR 784 YGL +V R V+Y IDP RELFIR LV G+ +R N +L ++ELE K+R Sbjct: 848 YGLIVVGRRPVHYGPIDPPAARELFIREGLVRGEINSRARALTANRELLERMDELEAKAR 907 Query: 785 RRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKIS 844 RRDIL D+ETLF +YD R+ D+ F++W+K+ S++ P LL + ++ A +++ Sbjct: 908 RRDILADEETLFGYYDARLPADIYQTASFETWYKRESQKNPQLLIMREEDVLAREASEVT 967 Query: 845 KLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVI 904 YP+ G L+L L Y FEP DGVT+ +P PLL Q+ +W +PGL + Sbjct: 968 ASQYPDHLRIGELQLPLEYHFEPNHPRDGVTLRVPAPLLPQLRRERLDWLVPGLIEAKAV 1027 Query: 905 ALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW--HW 962 AL++ LPK +R+NFVP P++ A L ++ E L ++L REL RMTG V E W Sbjct: 1028 ALVRGLPKAIRKNFVPVPDFVGAALAKITFGEGALSEALGRELTRMTGARVPDEAWAEAA 1087 Query: 963 DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSF 1022 + +HLK+ VVD + K L EGR L +L Q L A EQ + F Sbjct: 1088 AGLENHLKMNIEVVDARGKFLGEGRDLAELTARFAEASQAAL-APPQQKAEQKPVEAKGF 1146 Query: 1023 GQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPI 1082 Q+ E + K + +PALV+E V F E + L+RLLL + P Sbjct: 1147 AQVAEKAQAKMAGLSMTVYPALVEEAGVVKEGRFPTQAEAEWQHRRALQRLLLQQLAEPA 1206 Query: 1083 KYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLI-DANGGPVWTEEGFAALHEKV 1141 KYL +LP +LGL + GKV L++D + +D I D A+L E+ Sbjct: 1207 KYLRNRLPGLTELGLLYRDMGKVDALVEDILLASLDSCILDGEAALPRDGAALASLAERK 1266 Query: 1142 RAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGN 1201 R + +A+ +IL + KR KG++D+ A+ L+DIKAQ+ LVY GFV Sbjct: 1267 RGDWTAHAERLARLTLEILKHWHGLQKRFKGKIDLAQAVALNDIKAQLAHLVYPGFVRET 1326 Query: 1202 GFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDV 1261 + L + RYL+A+E+R +K+ RDR ++ + +Q +NK + D + Sbjct: 1327 PAEWLKEYPRYLKAVEQRFDKIGAQLQRDRVWSGELGGYWEQYQARLNKHQQEGKRDPQL 1386 Query: 1262 KEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RWM+EE RVS +AQQLGT P+SDKR+ + Q+ Sbjct: 1387 ALYRWMLEEYRVSLWAQQLGTKVPVSDKRLNKQWSQV 1423 >UniRef50_C4LJ32 Putative ATP-dependent helicase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJ32_CORK4 Length = 1409 Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 622/1389 (44%), Positives = 845/1389 (60%), Gaps = 114/1389 (8%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI 71 L +L + D RF RRL KK ++ A+ AI +++A Q A K+ A P I Sbjct: 32 LYAQLTEVSAADEHRFRRRL---KKARSDRARHAIARDLAAARTQFAAKI----ATLPTI 84 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 TYP +LPVSQ+ DI + IR HQV IVAGETGSGKTTQ+PKIC+ LGRG KG+IGHTQPR Sbjct: 85 TYPPDLPVSQRVDDIADTIRTHQVTIVAGETGSGKTTQIPKICLALGRGRKGMIGHTQPR 144 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 RLAARTVA RIA E+ + G +GY +RF D V +T +KLMTDGILLAE+Q+DRLL Y Sbjct: 145 RLAARTVAERIASEVGQDIGQSVGYAIRFDDRVGPSTAIKLMTDGILLAEMQRDRLLRAY 204 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-----NNAPI 246 DTIIIDEAHERSLNIDF+LGY+K LLPRRPDLK+IITSATIDPE+F+RHF N API Sbjct: 205 DTIIIDEAHERSLNIDFILGYIKRLLPRRPDLKVIITSATIDPEKFARHFADEEGNPAPI 264 Query: 247 IEVSGRTYPVEVRYRP--IVEEADD-----TERDQLQAIFDAVDELSQESHGDILIFMSG 299 IEVSGRTYPVE+RYRP I E D E+D + +A +EL GDIL F Sbjct: 265 IEVSGRTYPVEIRYRPPYIERERKDGSVERIEKDPQDTVCEACEELMAAGPGDILCFFPS 324 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 ER+IR+ DA+ + E+ PL+ RLSN+EQ+RVF H GRRIVLATN+AETSLTVPG Sbjct: 325 ERDIREAHDAIEAKKWPNVEVTPLFGRLSNAEQHRVFSPHRGRRIVLATNIAETSLTVPG 384 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I YV+D GTARISRYS RTKVQRLPIEPISQASANQR GR GR+++GI IRLYSE+DF S Sbjct: 385 IHYVVDTGTARISRYSTRTKVQRLPIEPISQASANQRSGRSGRIAKGIAIRLYSEEDFDS 444 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 RPEFTDPE+LRTNLASVI+ M +L LGDI FPF++ P+ R I+DG+ +L ELGA+ E Sbjct: 445 RPEFTDPEVLRTNLASVIITMASLKLGDINEFPFIDPPEPRAIRDGMMVLHELGALGEGE 504 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 + + L+ +GR++S++PVDPRLARM++EA V ++ +ALSIQD RERP D + Sbjct: 505 RDGSPVLSSIGREISRIPVDPRLARMLVEAHHRDVVEATSVVIAALSIQDVRERPTDHEP 564 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +D+ H RF D +SDF++++ LW YL +K LS NAFR+ CR +YL+Y+RVREW D Sbjct: 565 QADQAHARFKDTDSDFMSYLRLWAYLTSIKKELSGNAFRKRCRAEYLHYMRVREWMDFVR 624 Query: 600 QLRQVVKELG-----------IP-------------------------VNSEP------A 617 QLR+V ++L IP N+ P Sbjct: 625 QLRRVTEDLSWSWDQNRLTAVIPNDNDESTTPSTKKRSRPNKKAKSQNNNAHPDMPMLTV 684 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 ++ +H ++L+GLLS IG++ ++EY G R RF IFPGS L KK P+W+M AE+VETS Sbjct: 685 DHDGLHRSILSGLLSQIGLRSDVRKEYQGTRGTRFFIFPGSSLHKKQPQWLMAAEIVETS 744 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNY 737 R++ R AA I P WVE A L++ YSEPHW R + A MA ++ T++GLP+V R ++Y Sbjct: 745 RMFARDAAAIQPRWVEEQASDLLRHQYSEPHWSRRRSAAMAYQRSTLWGLPVVTDRPISY 804 Query: 738 SQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 +I+P RE+FIR ALVEGDW TRH FF N A ELE K+RRRD+L+DD+TL++ Sbjct: 805 HRINPREAREIFIRSALVEGDWVTRHKFFHLNRDKLATAGELEEKTRRRDLLIDDDTLYD 864 Query: 798 FYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNL 857 FYD RI V + RHFD+WWKK S++ P LL+F+ L+ A IS+ D+P+ W + Sbjct: 865 FYDSRIPASVTTGRHFDAWWKKESKKDPHLLDFDPDKLLHPEAHTISEDDFPDRWRAHST 924 Query: 858 KLRLSYQFEPGADADGVTVHIPLPLLNQVE-ESGFEWQIPGLRRELVIALIKSLPKPVRR 916 L L+Y+FEPG D DGV+V IPLP++ + + F+W +PGLRRELV ALI++LPKP+R Sbjct: 925 DLELTYKFEPGEDDDGVSVRIPLPIIGSLSWDDRFDWNVPGLRRELVTALIRTLPKPLRT 984 Query: 917 NFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVV 976 VPAP++A + + P E PL DSL LR + G + D+ ++P HL++ F+ + Sbjct: 985 TVVPAPDFARRAIEMMHPYEQPLTDSLADALRAVGGSGMTSSDFDVAKLPLHLRMNFQAI 1044 Query: 977 DDKNKKLKEGRSLQDLKDALKGKVQETLSAV---------------ADDGIEQ------- 1014 D + + + R L LK + +SA DDG Q Sbjct: 1045 DRHGRVIDQDRDLDALKKRQSSAATQAMSAAFKRSKVGSALSRGHSHDDGSAQDLPQTQP 1104 Query: 1015 ---------SGLHI------------WS---FGQLPESYEQKRGNYKVKAWPALVDERDS 1050 SG W+ G LPES + A+PAL Sbjct: 1105 DSQSSTARRSGEDATTVPDLGKVYAEWTDEGIGTLPESVQTTIDGQPTTAYPALKVTSKG 1164 Query: 1051 VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELID 1110 + + + M+ + LL+ +I + LP + ++ + P+G + L++ Sbjct: 1165 IEVVTSASQSTANSMMFTAVLTLLVQSIKINENQAVKGLPLQQRVAVEHYPHGGLSGLVN 1224 Query: 1111 DCISCGV-DKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKR 1169 DC + D L+D +G + E F AL + E++ T+ +++ + + Sbjct: 1225 DCRVAAIKDALVD-HGVIERSPEAFEAL----KKEMSHTIPAATRRMVVAMAPGLVAYES 1279 Query: 1170 LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHR 1229 + + + DIK Q+ L+ VT G L RY++A+E RLE + DP R Sbjct: 1280 MAEEIKKWDGQAIEDIKRQLNILLPPNAVTRYGTGHLKHLQRYMKAVEIRLENMERDPDR 1339 Query: 1230 DRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDK 1289 D ++ N+++A++ + LP R + I + ++ELRV FA++LGT +S + Sbjct: 1340 DADGQEEINNLERAFRSKLKGLPQQRANSPAARAIIFSLQELRVQVFAERLGTAQKVSPQ 1399 Query: 1290 RILQAMEQI 1298 RI +A+ ++ Sbjct: 1400 RITKAINKL 1408 >UniRef50_B5JXZ9 ATP-dependent helicase HrpA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXZ9_9GAMM Length = 1300 Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust. Identities = 609/1304 (46%), Positives = 838/1304 (64%), Gaps = 36/1304 (2%) Query: 10 TALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARP 69 AL+ R+ M D+ RRL K + D +A+ +AK+ID +A + R P Sbjct: 9 AALKARIAEAMRGDQFHLHRRL----KRLDADNAEAV-SALAKDIDTSAQRRQQRAETLP 63 Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 Y LP+ + DIL+AI +HQVV++ GETGSGKTTQLPK+C+ELGRG+ G IGHTQ Sbjct: 64 TPEYDAQLPIVAARADILKAIEEHQVVVLCGETGSGKTTQLPKLCLELGRGVAGYIGHTQ 123 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAAR+VA RIAEELKTE G +G+KVRF+D VS+ + +KLMTDGILLAE Q DR L Sbjct: 124 PRRLAARSVAARIAEELKTELGQGVGFKVRFADKVSELSHIKLMTDGILLAETQGDRFLE 183 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YDT+IIDEAHERSLNIDFLLGY+K +LPRRPDLK+IITSATIDPERFS+HFN+API+ V Sbjct: 184 RYDTLIIDEAHERSLNIDFLLGYIKRILPRRPDLKVIITSATIDPERFSKHFNDAPILNV 243 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQL--QAIFDAVDELSQESHGDILIFMSGEREIRDTA 307 SGRTYPVEV YRP+V+ D ER+ Q + D VDE Q GDIL+F+ GER+IRDT Sbjct: 244 SGRTYPVEVEYRPLVDLDSDDERETSLRQGVADCVDEAMQNGPGDILVFLPGERDIRDTQ 303 Query: 308 DALNK----LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 L K + +ILPLY RLSN+EQ R+F+S RRIVL+TNVAETS+TVPGI +V Sbjct: 304 RFLEKHFASRRGQSADILPLYGRLSNAEQQRIFKSSGPRRIVLSTNVAETSVTVPGIVFV 363 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 ID G AR+SRYSYR+KVQRLPIE ISQASANQRKGRCGRV+ GIC RLYSEDDF +RPEF Sbjct: 364 IDTGLARVSRYSYRSKVQRLPIEAISQASANQRKGRCGRVAPGICYRLYSEDDFNARPEF 423 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 TDPEILRTNLA VILQM +L LG+I FPF+EAPD R I DG +LL ELGA++ Q Sbjct: 424 TDPEILRTNLAEVILQMESLRLGEIEQFPFIEAPDSRLISDGYKLLFELGAMS--RQGKR 481 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +KLT LG+++S+LP+DPRLARM++ + + C+ E + + +ALSIQDPRERP D +QA+DE Sbjct: 482 HKLTSLGQKMSRLPIDPRLARMLMASDRENCLEETLTLVAALSIQDPRERPHDHRQAADE 541 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H+++ D+ SDF+A +NLW + E+ +ALS N R+ CR ++L+++R+REW+D QL Sbjct: 542 AHQQWRDERSDFIALLNLWRHFNERSRALSQNQLRKWCRENFLSWVRMREWRDTRRQLSD 601 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 K+L + NS Y E+H ALL+GLL +IG+K+ DK EY G RN RF +FPGSG+ KK Sbjct: 602 FAKQLKLKRNSIEPVYDELHRALLSGLLGNIGLKE-DKSEYLGPRNRRFHLFPGSGVRKK 660 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVT 723 +WVM AE+ ETSR++ A I PEW+E A HL+K+ EPH+ R G VMA E+ + Sbjct: 661 -VQWVMAAEIFETSRVFAHTVAEIKPEWLEQYASHLLKKRQFEPHFHRKSGQVMAYEQAS 719 Query: 724 VYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKS 783 +YGL I A ++VNYS+I+P R++F+R AL + Q+ F R N +L ++ ELE K Sbjct: 720 LYGLVIRARKRVNYSRINPVESRQIFVRDALADMQLQSEAPFMRHNRQLLEDIAELEAKG 779 Query: 784 RRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKI 843 RRRD+L+D++ F++QR+ DV A FD W KKV R+ P L + +++ + Sbjct: 780 RRRDLLLDEQPRIAFFEQRVPQDVGDAATFDRWRKKVERDDPYYLYLSERDCLRQADHAV 839 Query: 844 SKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELV 903 +P+ L L LSY FEPGAD+DG+T+HIP L QV+ W +PG + + Sbjct: 840 HTAQFPSELQFDELTLPLSYHFEPGADSDGITLHIPSAALKQVDAERCSWLVPGWLEDKI 899 Query: 904 IALIKSLPKPVRRNFVPAPNYA------------EAFLGRVKPLELPLLDSLERELRRMT 951 ALIKSLPK R FVP P+ A + G V+ L +L L R Sbjct: 900 AALIKSLPKAQRTRFVPVPDVASEARRELMRQNPQCGAGEVRSLS----RALAAWLGRYA 955 Query: 952 GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDG 1011 GV + D ++ HL++ F V + K + +GR L L+ +L +++ Sbjct: 956 GVALSPNDLAEAELEPHLRMRFEVRNADQKLIGQGRDLNALQASLAEHAEDSFYGGDFHD 1015 Query: 1012 IEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLR 1071 +E+ G+ W FG+LP+ ++ ++K +PAL+D DSV+I+L D ++++ +GL Sbjct: 1016 LERDGITRWDFGRLPDGVAFEQNGVQLKGYPALLDMGDSVSIRLLDTREDRQRQHRDGLA 1075 Query: 1072 RLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTE 1131 RL L + IKYL +P+ KL L+F P G EL++D I ++ +G Sbjct: 1076 RLFQLQLRDQIKYLKRHIPDIDKLALWFAPVGGKDELVEDIIYAVTQRVFLEHGELPSHP 1135 Query: 1132 EGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGG 1191 F + + ++E+ + +++Q+ +IL ++ +++ G + + DI Q+ Sbjct: 1136 ADFESEVARGKSEMVEAAAALSQQLVEILGQAHSVRQKIGGELPLNWVEAAQDIDDQLEW 1195 Query: 1192 LVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL 1251 L+Y GF++ L RYL AI+ RLEKL P +DR + ++E + +Q ++L Sbjct: 1196 LIYPGFLSETPSDWLAQYPRYLAAIQFRLEKLDHAPDKDRLRRSEIEPLWARFQGLWDEL 1255 Query: 1252 PPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 E E RW++EELRV+ +AQ L T S +R+ +A+ Sbjct: 1256 -----EAPQAAEARWLVEELRVARYAQHLKTRLKTSPERVEKAL 1294 >UniRef50_C1DAE5 HrpA n=2 Tax=Betaproteobacteria RepID=C1DAE5_LARHH Length = 1290 Score = 1133 bits (2930), Expect = 0.0, Method: Compositional matrix adjust. Identities = 604/1243 (48%), Positives = 830/1243 (66%), Gaps = 24/1243 (1%) Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 KV R P + + LPV+QK+ ++L AI +QVVIV GETGSGKTTQLPK+C++LGR Sbjct: 58 KVAARRERLPVPAFDEALPVNQKRDELLAAIDANQVVIVCGETGSGKTTQLPKLCLQLGR 117 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 G +GLIGHTQPRRLAAR+VA+RIAEEL T+ G +G+KVRF+D SD + +KLMTDGILL Sbjct: 118 GTRGLIGHTQPRRLAARSVASRIAEELGTQIGQGVGFKVRFTDRTSDQSFIKLMTDGILL 177 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 AE Q DR L YDT+IIDEAHERSLNIDFLLGYL++LLPRRPDLKIIITSATID ERFSR Sbjct: 178 AETQTDRYLEAYDTLIIDEAHERSLNIDFLLGYLRQLLPRRPDLKIIITSATIDAERFSR 237 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVE-EADDTERDQLQAIFDAVDELSQESHGDILIFMS 298 HFN AP+IEVSGRTYPVEVRYR + E + DD + AI DAVDEL++ GDIL+F+ Sbjct: 238 HFNGAPVIEVSGRTYPVEVRYRALGEKDEDDRDLAMEDAIVDAVDELARLGSGDILVFLP 297 Query: 299 GEREIRDTADALNK--LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 GEREIRDTA+AL K L +R+ E+LPL+ARLSN EQNR+F+ +GRRIVLATNVAETSLT Sbjct: 298 GEREIRDTAEALRKARLTVRY-EVLPLFARLSNEEQNRIFKGSNGRRIVLATNVAETSLT 356 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI+YVID G ARI RYS R KV++L +E ISQA+A QR GRCGRV+ G+CIRLY+EDD Sbjct: 357 VPGIRYVIDTGLARIKRYSPRAKVEQLLVEKISQAAARQRAGRCGRVAAGVCIRLYAEDD 416 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F +RP FTDPEI+R+NLA+VIL+M +L LG + FPF++ P R I DG +L ELGA++ Sbjct: 417 FNARPAFTDPEIVRSNLAAVILRMASLRLGAVVEFPFIDPPSARLIADGYDVLHELGAVS 476 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + LTPLGR+L+++PVDP++ RM+L A+ + C+RE +++ SALSIQDPRERP D Sbjct: 477 ERGE-----LTPLGRELARIPVDPKIGRMLLAARDYHCLREMLVLVSALSIQDPRERPFD 531 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN-AFRRLCRTDYLNYLRVREWQ 595 ++A++ RF D+ SDFL F+ LW++ + K SN LC + +L++LR+REW+ Sbjct: 532 AREAAERAQARFADERSDFLGFLALWDFFDDALKHKKSNRQLVELCHSHFLSHLRLREWR 591 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 +++ QL Q+ +L + N PA + ++H ALLTGLL ++GMK + +Y GAR F +F Sbjct: 592 ELHGQLAQIAHDLELRENQTPATFEQLHKALLTGLLGNLGMKSMEGDDYLGARGIHFHVF 651 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 PGSGL K PKW++ EL ETSRL+ R ARI+PEW+EP+A HL+KR Y EPHWE+A+G Sbjct: 652 PGSGLKKSKPKWLVAGELTETSRLYARTVARIEPEWIEPLAMHLVKRHYFEPHWEKARGE 711 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 V+A+E+VT+YGL IV R V+Y +ID R++F+R AL G T+ FFR N +L E Sbjct: 712 VVASERVTLYGLNIVPRRTVSYGRIDATEARQIFVREALANGQLHTQAPFFRHNQRLIRE 771 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSML 835 VEELEHK+RR+D+LVD+ETL FYD+RI D+ AR FD+W + + P LL ++ L Sbjct: 772 VEELEHKARRQDVLVDEETLVAFYDERIPADICDARSFDAWREGAEKADPKLLFLDRDYL 831 Query: 836 IKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQI 895 ++ AE I++ +P + + +LRL Y+FEP DGVTV +PL +LN++E + EW + Sbjct: 832 MQHAAEHITEEQFPEWLDTPDGRLRLRYRFEPNHPLDGVTVDVPLAILNRLEPARLEWLV 891 Query: 896 PGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMT-GVT 954 PG+ RE + LIK+LPK +RR VP P++ FL + P+ L R + R T GV Sbjct: 892 PGMIREKLALLIKALPKQIRRACVPVPDFVTRFLSTGPRQDQPVGPQLARFILRETGGVE 951 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 VD + ++P H ++ RV+DD ++L GR L L+ G E + E+ Sbjct: 952 VDPAAFEAAELPAHARMNLRVLDDGRQELGMGRDLVTLQKQF-GTAAELTFRDSTHEFER 1010 Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 + W G LPES + RG ++ +PAL E D VA++LFD P + + A G+ RLL Sbjct: 1011 DDVQGWDVGNLPESIQFARGRQQLTGYPALACEEDRVALRLFDTPEKARAAHRQGVVRLL 1070 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 + +K L + LP ++ L L+DD ++C D+ + +++ F Sbjct: 1071 RRELKEHMKQLAKGLPGFTQIALQLRGVASADALLDDAVACICDRAFIGDDDAPRSQKAF 1130 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAV---FNINKRLKGRVDMTMALGLSDIKAQMGG 1191 ++ R L + + V Q LTA+ + ++ + + LG +I+A Sbjct: 1131 DEQKKRARTRLP----AVTQAVTQYLTAIAAEYTKTTQMADKHRLGPKLG-PEIRA---- 1181 Query: 1192 LVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL 1251 LVY GF+ + +L + RYL+A + R++K A + RD + +V + Q W + +L Sbjct: 1182 LVYPGFLAATPWAQLPNLPRYLKAKQLRMDKYASNSQRDGQRGAEVAALWQRWADKVAEL 1241 Query: 1252 PPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQA 1294 + +++ RW+IEELRVS FAQ+L TP+P+S KR+ +A Sbjct: 1242 DAREGAPQALRDFRWLIEELRVSLFAQELKTPFPVSVKRLEKA 1284 >UniRef50_Q1YSZ9 ATP-dependent helicase HrpA n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=Q1YSZ9_9GAMM Length = 1309 Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 572/1225 (46%), Positives = 810/1225 (66%), Gaps = 14/1225 (1%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P +YP+ LPVS + +I E + HQV++VAGETGSGKTTQ+PKIC++ GRG++GLIGHT Sbjct: 78 PAFSYPE-LPVSARADEIAELLTKHQVIVVAGETGSGKTTQIPKICLQAGRGVRGLIGHT 136 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AARTVA RIAEELK G +GY+VRFSD + N+++KLMTDGILLAEIQ+DR L Sbjct: 137 QPRRIAARTVATRIAEELKVNIGEAVGYQVRFSDQSAPNSLIKLMTDGILLAEIQRDRFL 196 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 YDTIIIDEAHERSLNIDFLLGYLK LLP+RPDLKIIITSATID ++FS+HFN+AP++E Sbjct: 197 SAYDTIIIDEAHERSLNIDFLLGYLKNLLPQRPDLKIIITSATIDVDKFSKHFNDAPVVE 256 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTA 307 VSGR++PV+V Y DD E D+ Q I D + ++ + GD+LIF+SGEREIR+ Sbjct: 257 VSGRSFPVDVIY----NHPDDLEADRDQMIVDCLQDIHHNQKAGDVLIFLSGEREIREVN 312 Query: 308 DALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 A+ + L HTE++PLYARLS +EQ+++F H GRRIVL+TNVAETSLTVPGI+YVID G Sbjct: 313 LAIKRAQLPHTEVVPLYARLSLAEQSKIFSPHRGRRIVLSTNVAETSLTVPGIRYVIDTG 372 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427 AR+SRYS+RTKVQRLPIE ISQASANQR GRCGR+++G+C RLYSE+DF RP FTDPE Sbjct: 373 RARVSRYSFRTKVQRLPIEAISQASANQRAGRCGRIADGVCYRLYSEEDFEGRPAFTDPE 432 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 I+RTNLA+VILQM L +GDI FPFV+ PD R I DG +LLEEL A+T D KL+ Sbjct: 433 IVRTNLAAVILQMLQLRIGDIRNFPFVDPPDSRMISDGFKLLEELQAVTEDG-----KLS 487 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRR 547 LG++L +P+DPR ARM+LE+ K+GC+ E MIIT+ LSIQDPRERP DKQQA+D+ H++ Sbjct: 488 NLGKRLVNIPLDPRFARMLLESAKNGCLAEVMIITTGLSIQDPRERPADKQQAADQSHKK 547 Query: 548 FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 + + SDF++ +NLW + EQ++ LS N + R C+ ++++YLR+REW+D++ Q+ + Sbjct: 548 WQEPNSDFVSLLNLWRHFEEQRQQLSGNQYSRYCKRNHVSYLRMREWRDLHHQVHTACRG 607 Query: 608 LGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKW 667 L + N+EPAE IH ++L+GLL +G+ DK EY G RN +F IFPGSGL KKPPKW Sbjct: 608 LKLTANTEPAEQDAIHRSILSGLLGQVGILQ-DKWEYLGTRNRKFFIFPGSGLSKKPPKW 666 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 +M L+ET++ + A+ID +W+EP+A HL+K++YSEP + + G VMA E+ T++GL Sbjct: 667 LMAGSLMETTKQFALTVAKIDSDWLEPLAAHLVKKSYSEPFYNKKSGQVMAKERQTLFGL 726 Query: 728 PIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRD 787 IV + Y Q+ P R +FI+ ALVE ++ + F+R N KL AE++ LE + RRRD Sbjct: 727 SIVENKNRVYGQVAPQEARNVFIQQALVEEGYRGKGEFYRRNHKLVAELQALEDRFRRRD 786 Query: 788 ILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLD 847 +LV+ + +F+FYDQ + + + F+ W K+ +TP LL +K L+ G + + Sbjct: 787 LLVEQQAIFDFYDQLVPEGIYNLTAFEKWRKQAEAKTPKLLLLDKEYLLLRGLSQDEQAQ 846 Query: 848 YPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALI 907 +P + +L Y F+PG DGV+ +PL LL+Q+ FEW +PG+ R+ IALI Sbjct: 847 FPETISCDGIPYQLRYHFQPGHAEDGVSALVPLALLHQLPRYFFEWLVPGMLRDKCIALI 906 Query: 908 KSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPD 967 KSLPK RR+FVP P++ + FL + K + PL + L LR ++GV ++ E W + + + Sbjct: 907 KSLPKQTRRHFVPVPDHVDVFLRKAKSQDRPLTEVLAEHLRTVSGVVIEPEQWRQESLDN 966 Query: 968 HLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPE 1027 ++ F + DD+ + RSL+ L+ K ++ + L AD + G+ W F +LPE Sbjct: 967 WYQMNFVLEDDRGVTIAMARSLEQLQRDFKQQISQGLEKAADQSTSRQGITEWDFDELPE 1026 Query: 1028 SYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHE 1087 + G +KAWPAL D DSV++++ DNPL+ ++ G RL LL +KYL + Sbjct: 1027 EVALQHGKISIKAWPALRDCGDSVSLEVMDNPLQAEKVSRQGQLRLALLRGREQVKYLEK 1086 Query: 1088 KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELND 1147 L L L G LID IS + + + V ++ F +++ +++ Sbjct: 1087 NLLRGKDLALKAANVGARQRLIDALISASFQQAVFSGHSVVRDQQQFDQAYDQGISQVVG 1146 Query: 1148 TVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLG 1207 + +E +L + ++ K+L+G + + DI+ Q+ L + + + Sbjct: 1147 LAQSYTESIETLLPRLHDLQKQLRG-LGLPAIYAAEDIRNQLDWLFASETLCTVTDEIIS 1205 Query: 1208 DTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN-VQQAWQQWINKLPPARREDEDVKEIRW 1266 RY+ AI+ R+EKL +DR + ++ + + Q I P + + + + W Sbjct: 1206 QYPRYINAIQVRVEKLTQQQSKDRQHIAEISDLLTDCRQALIEDQPLSSDLEAALLDYCW 1265 Query: 1267 MIEELRVSYFAQQLGTPYPISDKRI 1291 ++EE RVS FAQQL T P+S KR+ Sbjct: 1266 LVEEYRVSLFAQQLKTRVPVSLKRL 1290 >UniRef50_A3YEF6 ATP-dependent helicase HrpA n=1 Tax=Marinomonas sp. MED121 RepID=A3YEF6_9GAMM Length = 1328 Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/1329 (44%), Positives = 844/1329 (63%), Gaps = 65/1329 (4%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQA-IFQEMAKEIDQAAGKVLLREAARPEITYP 74 + +M +DR R++ +++ + ++ A + +E+ I + KV R PEI Y Sbjct: 1 MQDVMSKDRYHIERKVQLIERQQKSNSLDANLVEEVKAMILASQEKVRERSELVPEIKYD 60 Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 +LPV+ K + I+ +I+ +QVVIVAGETGSGKTTQLPK+C++ G G+ G+IGHTQPRRLA Sbjct: 61 QSLPVAAKAEYIIASIKANQVVIVAGETGSGKTTQLPKMCLQAGLGVAGMIGHTQPRRLA 120 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 AR+VA+RI++EL E G +G++VRF+D SD T+VKLMTDGILLAEIQQD+ L +Y I Sbjct: 121 ARSVADRISDELGVELGDEVGFQVRFNDESSDKTLVKLMTDGILLAEIQQDKFLQKYQAI 180 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 IIDEAHERSLNIDFLLGYLK +LP RPDLKII+TSATID RFS+HFN+AP+ EVSGRT+ Sbjct: 181 IIDEAHERSLNIDFLLGYLKRILPSRPDLKIIVTSATIDVARFSKHFNDAPVFEVSGRTF 240 Query: 255 PVEVRYRPIVEEAD----DTERDQLQAIFDAVDELSQESH-------GDILIFMSGEREI 303 PVE+RY+P++ ++D D ++ Q I DAV + E DIL+F+ GEREI Sbjct: 241 PVEIRYQPLLLKSDSEEVDADQSMEQGIVDAVHTIIHEEKLSSFRGASDILVFLPGEREI 300 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 R+TA+ L + LRHTE++PLYARLS+SEQ ++F+SHSGRRIVL+TNVAETSLTVPGI+YV Sbjct: 301 RETAELLRREELRHTEVVPLYARLSSSEQQKIFKSHSGRRIVLSTNVAETSLTVPGIRYV 360 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 IDPG ARISRYS R+KVQ+LPIE ISQASANQR GRCGRV++GICIRLY E D+ +R EF Sbjct: 361 IDPGVARISRYSVRSKVQQLPIEKISQASANQRAGRCGRVADGICIRLYDEADYQARAEF 420 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 TDPEI RTNLASVILQM L LG + F FVE PDKR I DG R L ELGAI + Sbjct: 421 TDPEIFRTNLASVILQMANLRLGAVEKFSFVEMPDKRLINDGYRALNELGAINKE----- 475 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +LTP+GRQL++LP+DP+L RM++ A K G + E II SAL+IQDPRERP +K+ SD+ Sbjct: 476 -RLTPIGRQLAKLPIDPKLGRMIIAADKLGVLNEIAIIVSALTIQDPRERPQEKKTQSDQ 534 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H D +SDF+ +NLW+ EQ++ALS N R+ CR +LNY+R+REW+DI+ Q+ Sbjct: 535 AHAVDKDADSDFVVLLNLWHRFEEQRQALSQNHLRQFCRKQFLNYMRMREWRDIHRQILI 594 Query: 604 VVKELGI---------------------------------------PVNSEPA-EYREIH 623 K+LG P +S+P+ +Y +H Sbjct: 595 SCKQLGFKESQSKPQENENKKQAIQSQKHKANHVSAKSNVSEALEEPASSKPSVDYERVH 654 Query: 624 IALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRI 683 ALL GL + I K + +E+ R+ + IFPGS LFKKPP+WVM AE+VET++L+GR+ Sbjct: 655 RALLAGLFTQIANKLDETKEFVACRSRKMHIFPGSVLFKKPPQWVMSAEMVETTKLYGRV 714 Query: 684 AARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPA 743 +A+++P WVE A+ +KR Y +PHWE+ QG VMA E+V++YGL +VA R+V+YS+++P Sbjct: 715 SAKMEPLWVEEYAKPFVKRQYFDPHWEKKQGRVMAYEQVSLYGLILVAKRRVDYSRVNPD 774 Query: 744 LCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRI 803 RE+FIR ALVEG+ +TRHAFF++N L +EE E K R RDILVDDE +F FY ++I Sbjct: 775 EAREVFIRSALVEGEMRTRHAFFQQNQDLIKTIEEDEAKLRTRDILVDDEVVFAFYQKQI 834 Query: 804 SHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSY 863 ++ + + + W K + L + L+K+ + I +P + + L + Y Sbjct: 835 PDEICNQKSLEFWLKS----NQEALTLTRKDLVKQEVD-IDNTAFPTSFGLNGVNLPIEY 889 Query: 864 QFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPN 923 QFEPG DG T+ +P+ LL Q+ W +PG +E A +++LPK +RR FVP P Sbjct: 890 QFEPGKAVDGATLKVPVGLLRQLSADELSWAVPGYIKEKCEAYLRALPKALRRRFVPIPQ 949 Query: 924 YAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKL 983 + + + + LL+ L +++R T + + +W +++ +L + V+ D+ K + Sbjct: 950 FVDRIYPNLSSTKGDLLEQLSLQIKRETLIDIPLTEWQGEKLEAYLNLNIEVISDQGKII 1009 Query: 984 KEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPA 1043 G++L +L+ +V E+ + E+ GL W +PE + KV A+PA Sbjct: 1010 GTGKALDELQTKFAAQVDESFAKFGTKAHEEKGLTNWPDQDVPEQQTLSQAGIKVTAFPA 1069 Query: 1044 LVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 LV ++V++K+FD+ + G+ LL +++ +KYL + LP + L F P G Sbjct: 1070 LVSNDETVSVKMFDDKATALETHRKGVIALLRISLSKDMKYLEKNLPKLRESLLIFAPIG 1129 Query: 1104 KVLELIDDCISCGVDKL-IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTA 1162 K L+DD ++ +DK+ +D P T E F K + +L ++A Q+ Q+L++ Sbjct: 1130 KKELLLDDLLNAVLDKVFVDGQTLP-RTREEFDQTLLKNKPQLVTLANEMALQLHQVLSS 1188 Query: 1163 VFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEK 1222 + K++KG + + D+K Q+G L+Y GF+ LG RY + IE RL++ Sbjct: 1189 YQKVAKQMKGNIPLPWTRVYGDLKQQLGNLIYPGFIGDTPLFWLGQLPRYFKGIEVRLDR 1248 Query: 1223 LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGT 1282 +++ A + E + Q++ + D ++ + RW++EE RVS FAQ +GT Sbjct: 1249 FQNHLNKENALVTHCEQLWQSYAKQKQGHDAKNVYDPELLKYRWLMEEYRVSLFAQNVGT 1308 Query: 1283 PYPISDKRI 1291 P+S+KR+ Sbjct: 1309 LEPVSEKRL 1317 >UniRef50_B2U9W9 ATP-dependent helicase HrpA n=11 Tax=Betaproteobacteria RepID=B2U9W9_RALPJ Length = 1333 Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 597/1277 (46%), Positives = 844/1277 (66%), Gaps = 55/1277 (4%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG----L 124 P IT+P+ LPVS ++ +I +AI +QVVIV+GETGSGKTTQLPKIC+ +GRGI L Sbjct: 63 PPITFPEALPVSARRDEIAQAIAANQVVIVSGETGSGKTTQLPKICLSIGRGIGAGGTGL 122 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRR+AA + A RIA+E+ T G +G++VRF+D +S VKLMTDGILLAE Q Sbjct: 123 IGHTQPRRIAATSTAKRIAQEIGTPVGEHVGFQVRFNDTLSAGASVKLMTDGILLAETQN 182 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN- 243 D LL YDTIIIDEAHERSLNIDFL+GYLK+LLPRRPDLK+IITSATID +RF+ HF Sbjct: 183 DPLLRAYDTIIIDEAHERSLNIDFLIGYLKQLLPRRPDLKLIITSATIDAKRFAEHFAGP 242 Query: 244 ---APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 AP+IEVSGR YPVEVRYRPI + D ERD +A+ DAVDEL++E GD+LIF+ GE Sbjct: 243 KGPAPVIEVSGRLYPVEVRYRPIQRDEKDKERDLYEALVDAVDELAREGPGDVLIFLPGE 302 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIR+ A+AL K + HTEILPL+ARLS EQ RVF+ + RRIVLATNVAETSLTVPGI Sbjct: 303 REIREAAEALRKHHPAHTEILPLFARLSVQEQERVFRPSNARRIVLATNVAETSLTVPGI 362 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 +YV+D G AR+ RYSYR KV++L IEP+SQA+ANQR GRCGRV++G+CIRLY E DF++R Sbjct: 363 RYVVDTGLARVKRYSYRNKVEQLQIEPVSQAAANQRAGRCGRVADGVCIRLYDEADFIAR 422 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P FTDPEILR++LA+VIL+M AL L D+ FPF+E P R I DG +LL+ELGA+ DE Sbjct: 423 PRFTDPEILRSSLAAVILRMKALRLTDVEQFPFIEPPLGRAIADGYQLLQELGAV-DDEN 481 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 A LTPLG+Q+++LP+DPR+ARM+L + H C+RE +II SALS+QDPRERP + QQ Sbjct: 482 A----LTPLGKQVARLPLDPRVARMILAGRDHQCLREMLIIASALSVQDPRERPQELQQQ 537 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA-FRRLCRTDYLNYLRVREWQDIYT 599 +D+ HR+F D++S+FL +V LW + E SN + CR+ +L+++R+REW+D+++ Sbjct: 538 ADQAHRQFADEKSEFLGWVKLWKWFEEAVAHKKSNKQLQEQCRSHFLSHVRLREWRDVHS 597 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMK----DADKQEYTGARNARFSIF 655 QL V E G +N Y ++H+ALLTGLL +IG++ D +EY GAR +F ++ Sbjct: 598 QLHTTVAEQGWKLNESDPTYEQLHLALLTGLLGNIGVRIEEADGKGREYLGARGIKFFLW 657 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 PGS + +K KWV+ EL+ETSRL+GR ARI+PEWVE V HL+K ++S+PHWE+ G Sbjct: 658 PGSVIARKAGKWVVGGELIETSRLFGRTLARIEPEWVEKVGAHLLKVSWSDPHWEKKAGQ 717 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 VMA E+ T+YGLPI R+V++ + P RE+FIR ALV+G+++TR FF N +L E Sbjct: 718 VMAFERGTLYGLPIYQQRRVHFGPMQPKEAREMFIRRALVDGEFETRLPFFTHNQRLVRE 777 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVS----RETPDLLNFE 831 +E LEHKSRR+D+LVDDE ++ FYD +I D+ + F+ W+ + + + LL Sbjct: 778 IENLEHKSRRQDVLVDDELIYAFYDSQIPADIYNTVSFERWYAEAASAGGKSGQKLLYLN 837 Query: 832 KSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGF 891 + L++ A I+ +P + + L+Y FEPG+ DGVT+ +PL LNQV Sbjct: 838 RDDLMRHEAAGITTDLFPKVLPIAGIDMGLTYHFEPGSPRDGVTLTVPLYALNQVPAQRT 897 Query: 892 EWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMT 951 EW +PG+ +E V L+KSLP+ +RR+ VP P+YA F+ RV+ + LLD L ++R T Sbjct: 898 EWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFVARVRLGDGDLLDRLIADVREQT 957 Query: 952 GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA--- 1008 G+ + R D+ + +P H + F+V+D+ ++L GR+L L+ L G+ Q+T ++A Sbjct: 958 GMALKRADFKLETLPAHHFMNFKVIDEHGRQLDMGRNLAQLRAELGGRAQQTFQSIAAQD 1017 Query: 1009 -------DDGIEQ------------------SGLHIWSFGQLPESYEQKRGNYKVKAWPA 1043 +G + SGL W+FG+LPE E ++G+ + +PA Sbjct: 1018 AAVAGTPSEGTKAGQAGKSGKAEAPANAALYSGLTTWNFGELPELLEVRKGSQTLFGYPA 1077 Query: 1044 LVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 LVD D +++FD+P + + GLRRL + + P+KYL + +P +++ + F G Sbjct: 1078 LVDAGDHCDVEVFDDPAQATRIHGLGLRRLFAIQLREPLKYLEKNIPGLSQMAIQFMNLG 1137 Query: 1104 KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 +L D + +++ + P+ + F A ++ RA L +IA+ V IL Sbjct: 1138 TQDDLRDQILDATLERACLQDPLPI-DDASFGARKDESRARLTLLAQEIARLVGAILAEY 1196 Query: 1164 FNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 + ++L+ + A +DI AQ+ L+++ F+ + +L RYL+ I R++KL Sbjct: 1197 AQLPRKLQ--IAKPFAAATADIDAQLKTLMHKRFIEATPYAQLTHFPRYLKGIALRIDKL 1254 Query: 1224 AVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED--VKEIRWMIEELRVSYFAQQLG 1281 DP RD +M ++ + Q +Q+ L + D ++E RWM+EELR++ FAQ+L Sbjct: 1255 KADPARDTQRMQEMAPLIQQYQRAEKALRVQGQGGNDPRMEEFRWMLEELRIALFAQELR 1314 Query: 1282 TPYPISDKRILQAMEQI 1298 TP P+S KR+ + E + Sbjct: 1315 TPVPMSVKRLQKVWESM 1331 >UniRef50_A4BTJ3 ATP-dependent helicase HrpA n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTJ3_9GAMM Length = 1294 Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/1281 (46%), Positives = 824/1281 (64%), Gaps = 25/1281 (1%) Query: 27 FSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARP----EITYPDNLPVSQK 82 F RRL+G+++ + Q F++ + V R R + + LP+ + Sbjct: 29 FRRRLYGLERRQR---QGRPFEQGLNRLKHDLANVQQRYEQRQSQVLQPAFSAALPIMDQ 85 Query: 83 KQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRI 142 + +I A+ HQV++V G+TGSGK+TQLP+I + G G++G+I HTQPRR+AAR++A RI Sbjct: 86 RAEIARALSAHQVIVVCGDTGSGKSTQLPQIALASGFGVEGMIAHTQPRRIAARSLATRI 145 Query: 143 AEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202 AEEL TE G +GYKVRFSD V +T +KL+TDG+LLAE Q D L YDTIIIDEAHER Sbjct: 146 AEELNTEVGAGVGYKVRFSDRVRFSTRLKLVTDGMLLAETQGDPDLAHYDTIIIDEAHER 205 Query: 203 SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP 262 SLNID+LLGYLK LLPRRP+LK+IITSATIDP+RFSR+FN APII+++GR+YPVE+RYRP Sbjct: 206 SLNIDYLLGYLKRLLPRRPELKVIITSATIDPQRFSRYFNGAPIIQIAGRSYPVEIRYRP 265 Query: 263 IVEEADDTERDQL--QAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEI 320 +V E D+ ERD+ +AI +A+DEL+ E+ GD+L+F+ ER+IR+TA+ L K + TE+ Sbjct: 266 LVSE-DEDERDRSLPEAILEALDELAAETAGDVLVFLPSERDIRETAENLRKHHPPRTEV 324 Query: 321 LPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 LPL+ RLS +EQ RVF H RRIVLATNVAETSLTVPGI++V+D G ARISRYSYRTKV Sbjct: 325 LPLFGRLSATEQLRVFAPHDRRRIVLATNVAETSLTVPGIRHVVDSGLARISRYSYRTKV 384 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQM 440 QRLPIEPIS+ASA+QR GRCGR + G+CIRLY+E D+ R EFT+PEILRTNLASVILQM Sbjct: 385 QRLPIEPISRASADQRAGRCGREAPGVCIRLYAEADYQVRAEFTEPEILRTNLASVILQM 444 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 L LG+I F F++ PD R I+DG++LL ELGA+ D LT LGR+L+ LPVDP Sbjct: 445 KYLKLGEIERFDFIDPPDSRAIRDGLKLLYELGAVAADN-----TLTGLGRRLAALPVDP 499 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 R+ARM++ + + E ++I +ALSI DPR+RPM+ QA+D R+ D+ SDFLA V Sbjct: 500 RIARMLVAGETERALNEVLVIAAALSIPDPRQRPMNAPQAADAAQARWRDQRSDFLALVK 559 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 LWN EQ + LS R C +L+Y+R+REW+DI+ QLR++V +G N++ A+ Sbjct: 560 LWNDAQEQTRELSQRKLRLWCAEHFLSYVRLREWRDIHHQLRELVMGIGWRENAQQADTA 619 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 +H ALLTGLL +I + D+Q YTGAR + IFPGSG+ K+ P+W++ AELVETSR++ Sbjct: 620 AVHRALLTGLLGNIAWR-TDEQHYTGARGLKLLIFPGSGIAKRRPRWIVAAELVETSRIF 678 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R I PEWVEP+A HL++R Y EP WE +G V E VT+YGLP+VA RK++Y+++ Sbjct: 679 ARTVGEIRPEWVEPLAAHLVQRRYFEPFWEEKKGRVAGYESVTLYGLPLVARRKIDYTRV 738 Query: 741 DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYD 800 DPA R LFIR LV G +T+ F N +L AE+E LE KSRRRD+LVD++ L FY Sbjct: 739 DPAAARALFIREGLVYGRLRTQGRFLAHNRQLIAEIEALEAKSRRRDVLVDEDVLAAFYA 798 Query: 801 QRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLR 860 +R+ D+ F+ W ++ E L +L++ A +I+ YP G ++L Sbjct: 799 ERLPADLADGASFERWIRRP--EHDQALFMTPQLLMEREAVEITADAYPEHLSVGGMRLP 856 Query: 861 LSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVP 920 L Y F+ ADGVTV +PL LNQ+ FEW +PGL +E V+ALI+SLPK +RRNFVP Sbjct: 857 LRYHFDLNQAADGVTVIVPLAALNQLALERFEWLVPGLLQEKVVALIRSLPKRLRRNFVP 916 Query: 921 APNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKN 980 P +A A L L+ + EL+RMTGV + + W ++ HL++ FRVVD Sbjct: 917 VPEFAAAILAAAPQGTGSLIQVVRDELKRMTGVLIPFDAWENVELAAHLQMNFRVVDTHG 976 Query: 981 KKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKA 1040 + + EGR L L+ L G + A + GL W F L E E ++ Sbjct: 977 RTVGEGRDLAALQREL-GTCARVQAGDARHRWGRRGLQRWDFDTLDEHVEFNDAGITLRG 1035 Query: 1041 WPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFN 1100 +PA+VDE +SVA+ L D+P + + G+R+L +L +P KYL KLP +L L ++ Sbjct: 1036 YPAVVDEGESVALHLLDSPEQAARTSLGGIRKLFMLQLPDQAKYLRRKLPGIDRLCLLYS 1095 Query: 1101 PYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQIL 1160 G D ++ ++ +G T E F A + R EL T +A+ + Q+L Sbjct: 1096 VLGSCEAFKQDFLAATYQRVFMPDGTLPRTREAFQARLQAGREELIPTATRLAQTLLQVL 1155 Query: 1161 TAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRL 1220 +R K + D++ Q+ +VY GFV + LG+ RY++A+ +RL Sbjct: 1156 EHYQEARQRFKAPLPPAQLESYRDMREQLDAMVYAGFVQDTPSEWLGELPRYMRALVRRL 1215 Query: 1221 EKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARR---EDEDVKEIRWMIEELRVSYFA 1277 E+L DP +DR + + ++ W+Q+ + R ED ++ RW++EE RVS FA Sbjct: 1216 EQLRRDPGKDRRGL---QAIRPLWEQYRRRREQHARQGTEDLQLEHYRWLLEEYRVSLFA 1272 Query: 1278 QQLGTPYPISDKRILQAMEQI 1298 Q+LGT +S+KR+ A +++ Sbjct: 1273 QELGTREKVSEKRLRTAWQRV 1293 >UniRef50_B9ZMZ4 ATP-dependent helicase HrpA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMZ4_9GAMM Length = 1307 Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/1298 (45%), Positives = 824/1298 (63%), Gaps = 33/1298 (2%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 T AL Q + L + LR +R+ H K+ + D + E +Q + R+ Sbjct: 14 TVEALPQGRERRELGELLRRARQRH--KRGQPCDRLVSTLTERLARAEQGGAE---RQHL 68 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 RP+ TY +LP+ +++ I+ AIR+H V+++ GETGSGKTTQLPK+C+E GRG GLIGH Sbjct: 69 RPQPTYAGDLPIHAERERIVAAIREHPVLVLCGETGSGKTTQLPKLCLEAGRGETGLIGH 128 Query: 128 TQPRRLAARTVANRIAEELKTEPGG----CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 TQPRR+AAR+VA+RIAEEL T GG +G+KVRFSD N VKLMTDG+LLAE+ Sbjct: 129 TQPRRIAARSVASRIAEELGTTLGGDRNSTVGFKVRFSDQTGPNNWVKLMTDGMLLAELA 188 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L YDT+I+DEAHERSLNIDFL+G LK L +RP+L+IIITSAT+DPER S F++ Sbjct: 189 HDPELRAYDTLIVDEAHERSLNIDFLMGVLKRLSKKRPELRIIITSATLDPERLSAFFDD 248 Query: 244 APIIEVSGRTYPVEVRYRPI-VEEADD------TERDQLQAIFDAVDELSQESHGDILIF 296 API+ V+GRTYPVE+RYRPI E+AD+ ERD I DAV E + GDIL+F Sbjct: 249 APILTVAGRTYPVELRYRPIEPEDADEDNSTERGERDLFDGIRDAVAECERAGPGDILVF 308 Query: 297 MSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 + GEREIRD AL TE+L LYARLS EQ RVFQSHSGRRIVLATNVAET+LT Sbjct: 309 LPGEREIRDAHKALRGQVRADTEVLALYARLSAREQARVFQSHSGRRIVLATNVAETALT 368 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI++VID G ARISRYS+R++VQRL +EPISQA+ +QR GRCGR+ GICIRL+SEDD Sbjct: 369 VPGIRFVIDSGLARISRYSWRSRVQRLSLEPISQAACDQRAGRCGRLGPGICIRLFSEDD 428 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 + RP FTDPEI R+NLASVILQM AL LG FPFV+ PD R ++DG RLLEELGA+ Sbjct: 429 YNLRPPFTDPEIQRSNLASVILQMAALKLGQPRQFPFVDPPDPRLVKDGYRLLEELGAVD 488 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 T + TP GRQL+++P+DPR M+L HGCV E I + LS+QDPRERP + Sbjct: 489 T-----RGRTTPRGRQLARMPIDPRHGAMLLAGADHGCVTETATIAAFLSLQDPRERPAE 543 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 QA+D+ HR F + SDF+ + LW ++ L SNA +R CR +LN+LR+REWQ+ Sbjct: 544 ATQAADQAHREFQVEGSDFMGMLRLWEAWHTAREDLGSNALKRWCREHFLNFLRMREWQE 603 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + QL ++ +E+ + N +PA+ +H ALLTGL+S IG K ++ +Y GARN RF I P Sbjct: 604 LRVQLLRLAREMDLKPNHQPADAEPVHRALLTGLVSQIGQK-TERGDYLGARNRRFQIHP 662 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GS L KK P WVM AE+ ET+R++ R ARI+P+W+ A HL+K EPH++R G V Sbjct: 663 GSVLAKKKPAWVMSAEIAETTRVYARDNARIEPDWILAAAPHLLKHHIFEPHFQRRSGRV 722 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 A +++T+YGL + + V++++ DP+ R + IR LV G+ +TR + N + AE+ Sbjct: 723 GAFDRITLYGLVVAPKKPVDFAKHDPSEARRILIREGLVGGELRTRSKGVQANREAVAEI 782 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI 836 E E + RRRD+LV+++ LF+FYD R+ D+ F++W +K ++ PD L +++ L+ Sbjct: 783 AEQEARGRRRDLLVEEDRLFDFYDARLPADITDGTSFETWARKAEKQDPDALRIDRAELL 842 Query: 837 KEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIP 896 E + + YP+ L+L L+Y+FEPG DGVTV IP+ LN V + +W +P Sbjct: 843 NEPDATLPQGAYPDHLELEGLRLPLAYRFEPGQPDDGVTVTIPIAALNAVPDWLGDWLVP 902 Query: 897 GLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVD 956 GL E V L+KSLPK +RR FVPAP++A A L R++ + PL+ +L LR MTG + Sbjct: 903 GLLEERVTGLLKSLPKGLRRQFVPAPDFAAAALARIEHRQGPLIPALAEALRAMTGTEIP 962 Query: 957 REDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSG 1016 + W + + HL + FR++D + ++ GR+L LK L G + A D I + G Sbjct: 963 LDAWRPETLEPHLVMRFRILDPEGQEQASGRNLAALKRRLGGSAEAHFDASRPDEITREG 1022 Query: 1017 LHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLL 1076 + W FG LPES E +++A+P LVD D+V+++L +P + ++A GLRRL LL Sbjct: 1023 ITEWDFGALPESVEFDHQGAQLRAFPILVDRGDAVSLELEPDPAKAERAHRAGLRRLFLL 1082 Query: 1077 NIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAA 1136 + + L +LP + L ++ G L D + D++ A P E A Sbjct: 1083 SARKTARDLRRQLPEIERACLNYSTLGSCEALRDQILEAAADRVFLAEPWPRDAE----A 1138 Query: 1137 LHEKVRA---ELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLV 1193 E++ A E + TV+++++ +IL ++ RL+G + ++ DI+ Q+ LV Sbjct: 1139 FRERLEARLPEFSPTVMELSRLAAEILRHWHDLRTRLQGDLPLSWIEAARDIRGQLEALV 1198 Query: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPP 1253 F+ L + RYLQAI+KRLE+L P +DRA+ + VE + Q Q+ I + P Sbjct: 1199 PADFLLRTPHDVLPELPRYLQAIDKRLERLTQAPDKDRARRVAVEPLWQQAQELIARAP- 1257 Query: 1254 ARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 + DV R+ IEE RVS FAQ+LGT +S KR+ Sbjct: 1258 ---DHPDVLAFRYRIEEFRVSQFAQELGTREKVSPKRL 1292 >UniRef50_D0WKL4 ATP-dependent helicase HrpA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WKL4_9ACTO Length = 1331 Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 616/1340 (45%), Positives = 808/1340 (60%), Gaps = 123/1340 (9%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R+ + P I YPD LPVS ++ +I AIRD+QVV+VAGETGSGKTTQLPKIC+ELGRG Sbjct: 4 RKRSVPNIAYPD-LPVSARRDEIARAIRDNQVVVVAGETGSGKTTQLPKICLELGRGTSA 62 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 +IGHTQPRR+AAR VA+R+A EL + G +GY+VRF++ VS T+VKLMTDGILLAEIQ Sbjct: 63 MIGHTQPRRIAARAVADRLAHELGVDLGAQVGYQVRFTEEVSPGTLVKLMTDGILLAEIQ 122 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L +YDTIIIDEAHERSLNIDFLLGYL LLPRRPDLK+IITSATID +RF++HF N Sbjct: 123 SDPELARYDTIIIDEAHERSLNIDFLLGYLARLLPRRPDLKVIITSATIDTQRFAKHF-N 181 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREI 303 AP++EVSGRTYPVE+RYRP+V + DQ+ I +A +EL E GDIL+F+SGE EI Sbjct: 182 APVVEVSGRTYPVEIRYRPLVGDDGGEATDQVSGIVEACEELMAEGPGDILVFLSGEGEI 241 Query: 304 RDTADAL-NKLNLRH------------TEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 RD A ++L RH E+LPLY+RLS +EQ+R+F+ RRI+LATN+ Sbjct: 242 RDAQAAFADELGRRHIEPGGRSSVPDAVEVLPLYSRLSAAEQHRIFERRPHRRIILATNI 301 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGI+YV+DPGTARISRYS RTKVQRLPIEPISQASANQR GR GRV++GICIR Sbjct: 302 AETSLTVPGIRYVVDPGTARISRYSARTKVQRLPIEPISQASANQRAGRSGRVADGICIR 361 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYS++DF R +FT PEI RT+LASVILQM ALGLG++A FPF++ P++R ++ G +LL Sbjct: 362 LYSQEDFDGREKFTQPEIQRTSLASVILQMLALGLGNVADFPFIDPPEERAVRAGAQLLT 421 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 E+GAI +LTP+GR+L++LP+DPRL RM+LEA K+GC E +++ +ALS+QD Sbjct: 422 EIGAI------DGARLTPVGRRLARLPIDPRLGRMLLEADKNGCASEVLVLVAALSVQDV 475 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP +K+ +D+ H RF + SDFLA++ LW YL Q++ LS +AFRR+CR ++LNYLR Sbjct: 476 RERPAEKRPQADQLHARFTARSSDFLAYLTLWRYLNTQRRELSGSAFRRMCRAEFLNYLR 535 Query: 591 VREWQDIYTQLRQVVKELGIPV----------------NSEPA----------------- 617 REW D+ QLRQ+ K LGI N PA Sbjct: 536 FREWADVVAQLRQLAKPLGIDAASIGLPGRAQIRQAGENGAPALGGAPNSGAAAAACRDF 595 Query: 618 -------EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMV 670 E IH ++L GLLS++G ++Y GAR A F I+PGSGL K+ P WVM Sbjct: 596 GRGADTPEAGAIHRSMLVGLLSNLGNYSQRSRDYEGARGAHFVIWPGSGLSKRTPAWVMA 655 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIV 730 AELVETSRL+ R A I+P+W+EP+A++L+KRTYSEP W GA M EKVT+YG+ + Sbjct: 656 AELVETSRLFARTVAAIEPQWIEPLAKNLVKRTYSEPFWSSRNGAAMCKEKVTLYGMTLA 715 Query: 731 AARKV----NYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRR 786 A R V S+ RE+FI H LVEGDW+T HAF ++N + E ELE K RRR Sbjct: 716 ADRPVLLASTGSESAREEAREMFILHGLVEGDWRTHHAFLKDNERALEEARELEEKMRRR 775 Query: 787 DILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKL 846 ++ E L FYD+RI V+S RHFDSWWKK R+ P LL+F + +L+ E + + Sbjct: 776 GLVAGPEALAAFYDERIPDFVVSGRHFDSWWKKAKRDDPHLLDFTQELLVGEA--EADEN 833 Query: 847 DYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIAL 906 DYP W QG ++L + Y F PGA ADGVTV IP+ LL QV GF+W +PG+R +LV Sbjct: 834 DYPAEWRQGEIRLPIEYSFSPGAYADGVTVTIPVTLLPQVRPEGFDWLVPGMREDLVTGT 893 Query: 907 IKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLD--------------SLERELRRMTG 952 I++LPK VRR VPAP+ A L PL LP + + + R+ G Sbjct: 894 IRALPKRVRRQLVPAPDVARQIL----PL-LPRWEDVAHGQEGAPSFRRAFAEAVFRLRG 948 Query: 953 VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI 1012 +D W ++P+HL + FRV ++ L E SL+ LK L + + + +V + Sbjct: 949 FWIDDAAWEEARLPEHLSVLFRVRSERGAVLDESTSLERLKLELAPRTRSAVESVVKGAV 1008 Query: 1013 EQS----------------------GLHIW---SFGQLPESYEQKRGN-YKVKAWPALVD 1046 Q+ L W S G +P S E + V+ +PAL Sbjct: 1009 AQALDEAHFRLAGGAAEGAALPLGESLGGWPDASGGVIPTSVETTGAHGMTVRGYPALAA 1068 Query: 1047 ERDS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV 1105 D V + + +P Q + GL LL I P + + P L L +PY Sbjct: 1069 GADGKVRLDVLADPALQAREHRRGLAALLAAAIALPETRITSRWPGAQALALAGSPYPDT 1128 Query: 1106 LELIDDCISCGVDKLIDA----NG---GPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQ 1158 L+ D L NG V T + L + D V I+ V Sbjct: 1129 SALVADIQLASARNLAAKWAAENGLDVADVRTRSQWDELRAWAKQRHEDEVYRISLDVAG 1188 Query: 1159 ILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEK 1218 I ++K + + L+D+K Q+ LV GFV+ RL RYL+A Sbjct: 1189 ICARRAEVDKWITESRSPALLATLADVKEQVANLVPSGFVSRTPAARLPHIERYLRAAYI 1248 Query: 1219 RLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDE---DVKEIRWMIEELRVSY 1275 R++K A +P D A ++++V + + + E RWM+EELRVS Sbjct: 1249 RIQKAATNPSGDDALAWQIQDVNDKVEAARAAAASRAYDPSAAAALDEARWMVEELRVSL 1308 Query: 1276 FAQQLGTPYPISDKRILQAM 1295 FAQQLGT +S KRI + + Sbjct: 1309 FAQQLGTNGKVSAKRIAKVL 1328 >UniRef50_B2JJC7 ATP-dependent helicase HrpA n=89 Tax=cellular organisms RepID=B2JJC7_BURP8 Length = 1462 Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/1324 (45%), Positives = 827/1324 (62%), Gaps = 109/1324 (8%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG-- 126 P IT+P+ LPVS ++++I AI HQVVIV+GETGSGKTTQLPKIC+ LGRG+ G Sbjct: 152 PPITFPEALPVSGRREEIARAIEGHQVVIVSGETGSGKTTQLPKICLALGRGLGAGGGGL 211 Query: 127 --HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 HTQPRR+AA RIAEEL T G +GYKVRF+D++S VKLMTDGILLAE Q Sbjct: 212 IGHTQPRRIAASATGRRIAEELGTPFGEVVGYKVRFTDNLSPGASVKLMTDGILLAETQT 271 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN- 243 D LL YDT+IIDEAHERSLNIDFLLGYLKE+LP+RPDLK+I+TSATID +RF+RHF + Sbjct: 272 DPLLKAYDTLIIDEAHERSLNIDFLLGYLKEILPKRPDLKLIVTSATIDADRFARHFGSE 331 Query: 244 ---APIIEVSGRTYPVEVRYRPIVEEAD----------------------DTERDQLQAI 278 AP+IEVSGR YPVEVRYRP+ +++ +T+RD + AI Sbjct: 332 EKPAPVIEVSGRLYPVEVRYRPVADDSPAVKAAEGNSGREHRPDRPKTQRETDRDLMDAI 391 Query: 279 FDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQS 338 +A DEL +E GD+L+F+ GEREIRD A+AL K + HTEILPL+ARLS +EQ RVF+ Sbjct: 392 VEAADELCREGPGDVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAAEQERVFRP 451 Query: 339 HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398 + RRIVLATNVAETSLTVPGI+YVID G AR+ RYSYR KV++L +E ISQA+ANQR G Sbjct: 452 SNARRIVLATNVAETSLTVPGIRYVIDTGLARVKRYSYRNKVEQLQVEAISQAAANQRAG 511 Query: 399 RCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 RCGRV++GICIRLY E DF +R FTDPEILR++LA+VIL+M +L L I FPF+E P Sbjct: 512 RCGRVADGICIRLYEEADFQARVRFTDPEILRSSLAAVILRMKSLHLTAIETFPFIEPPP 571 Query: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518 R I DG +LL ELGA+ D LTPLGR+L++LP+DPR+ RM+L A+ +RE Sbjct: 572 GRAIADGYQLLNELGAVDDDN-----ALTPLGRELARLPLDPRVGRMILAARDQLALREV 626 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 +II SALS+QDPR+RP+D Q+ +D+ HR+F D+ S+FL ++ +W + E SN R Sbjct: 627 LIIASALSVQDPRDRPIDAQEQADQAHRKFADERSEFLQWLKIWTWFEEAVAHKKSN--R 684 Query: 579 RL---CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 635 +L CR ++L++LR+REW+D+++QL VV+E G +N A + +IH+ALLTGLL +IG Sbjct: 685 QLTDACRQNFLSHLRLREWRDVHSQLLTVVREHGWRLNESEATFEQIHLALLTGLLGNIG 744 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 +K D+ Y GAR +F ++PGS L KK KWVM AEL+ETSRL+ R A+I+PEWVE V Sbjct: 745 LKADDEPYYLGARGIKFYLWPGSALVKKAGKWVMAAELIETSRLYARCIAKIEPEWVERV 804 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 HL+K++ SEPHWE+ V A E+ +YGLP+ R+V++ + DPA RELFIR ALV Sbjct: 805 GAHLLKKSLSEPHWEKRAAQVTAFERAMLYGLPVYHRRRVSFGKQDPARARELFIRGALV 864 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 EG++ T+ AFF N KL A++E+LEHKSRR+D+LVDDE ++ FYDQ I + + + F+ Sbjct: 865 EGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIYAFYDQAIPNGIHTGAAFER 924 Query: 816 WWK---KVSRETPD---LLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA 869 W++ K S + D LL + L++ A ++ +P + + L+Y FEPG+ Sbjct: 925 WYRDEVKKSGQQEDKLRLLYLSRDDLMRHEAAGVTTDLFPKRMTMAGVDMALTYHFEPGS 984 Query: 870 DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL 929 DGVT+ +PL LNQV+ EW +PG+ RE L+KSLP+ +RR+ VP P YA F+ Sbjct: 985 PRDGVTLAVPLYALNQVDTRRVEWLVPGMLREKTQLLLKSLPQKLRRHVVPLPEYAAGFV 1044 Query: 930 GRVKPLEL---PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEG 986 R LLD++ ++R T V + D+ + + HL + F+V+D+ ++L G Sbjct: 1045 ERHSGPPFGAGGLLDTVIADVREQTQVATKQSDYKLETLAPHLFMNFKVIDEHGRQLAMG 1104 Query: 987 RSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWS------------------------- 1021 R+L L+ L G+ Q+ +A + ++ S Sbjct: 1105 RNLAQLRAELGGQAQQQFQKIATSAAGAALANVGSGGDASARAAASGAAAGAGRGASAAP 1164 Query: 1022 ------------------------FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 FG+LPE E +RG + +PALVD +++FD Sbjct: 1165 RTPTAGEAAAAPATALYENLTTWNFGKLPELLEIRRGGQTLFGYPALVDRGTHCDVEVFD 1224 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGV 1117 +P E + GLRRL L + PIKYL + LP ++ + F P G EL D I + Sbjct: 1225 SPDEAARIHRAGLRRLFALQLREPIKYLEKNLPGLREMAMQFMPRGTQEELRDQLIDTAL 1284 Query: 1118 DKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 D+ P + F A ++ R+ L +IA+ V QIL + K+L Sbjct: 1285 DRACLQEPLPD-DDASFHARKDEGRSRLTLLAQEIARLVGQILGEYSAVLKKLAQ--AKP 1341 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 A +D+ AQ+ L+ + FV + +L RYL+ I R++KL DP RD Q ++ Sbjct: 1342 FAAAYADMHAQLDALIGKRFVVDTPYAQLSHFPRYLKGIALRIDKLKADPARDARQFAEL 1401 Query: 1238 ENVQQAWQQWINK---LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQA 1294 + + Q +Q+ + + +P R + E RW++EELRVS FAQ+L TP P+S KR+ + Sbjct: 1402 QPLAQHYQRALGQRGGVPDVR-----LAEFRWLLEELRVSLFAQELRTPMPVSVKRLYKV 1456 Query: 1295 MEQI 1298 E + Sbjct: 1457 WESM 1460 >UniRef50_Q1C7D5 ATP-dependent helicase HrpA n=4 Tax=Bacteria RepID=Q1C7D5_YERPA Length = 644 Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/640 (83%), Positives = 579/640 (90%), Gaps = 1/640 (0%) Query: 6 KLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 K + TAL +L LMLRD+ R RRLH +K+ NPDA QAI E+ EI A +V R Sbjct: 2 KSSLTALSTQLGELMLRDQQRIQRRLHSARKINNPDAIQAITHEIEAEIAIAMQRVTRRR 61 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 AA P I+YPDNLPVSQKKQDI AIRDHQV+IVAGETGSGKTTQLPKIC+ELGRG+KG+I Sbjct: 62 AACPAISYPDNLPVSQKKQDIYNAIRDHQVIIVAGETGSGKTTQLPKICLELGRGVKGVI 121 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRRLAARTVANRIA+EL T GGC+GYKVRF+D V +NT+VKLMTDGILLAEIQQD Sbjct: 122 GHTQPRRLAARTVANRIADELDTSLGGCVGYKVRFNDQVGENTLVKLMTDGILLAEIQQD 181 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 RLLMQYDT+IIDEAHERSLNIDF+LGYL+ELLP+RPDLK+IITSATIDP+RFS+HFNNAP Sbjct: 182 RLLMQYDTLIIDEAHERSLNIDFILGYLRELLPKRPDLKVIITSATIDPQRFSQHFNNAP 241 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRD 305 IIEVSGRTYPVEVRYRPIV++ADD +RDQLQAIFDAVDEL +ES GDILIFMSGEREIRD Sbjct: 242 IIEVSGRTYPVEVRYRPIVDDADDVDRDQLQAIFDAVDELGRESAGDILIFMSGEREIRD 301 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 TADAL K NL HTE+LPLYARLSNSEQNRVFQSH GRRIVLATNVAETSLTVPGIKYVID Sbjct: 302 TADALIKQNLPHTEVLPLYARLSNSEQNRVFQSHHGRRIVLATNVAETSLTVPGIKYVID 361 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 PGTARISRYS+RTKVQRLPIEPISQASANQRKGRCGRVS+GICIRLYSE DFLSRPEFTD Sbjct: 362 PGTARISRYSFRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYSEQDFLSRPEFTD 421 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEILRTNLASVILQMT+LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI T + Sbjct: 422 PEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIQTASNGHQ-Q 480 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LTPLGRQL+QLPVDPRLARMVL+AQK GCVRE MIITSALSIQDPRERP+DKQQASDEKH Sbjct: 481 LTPLGRQLAQLPVDPRLARMVLQAQKSGCVRELMIITSALSIQDPRERPVDKQQASDEKH 540 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 RRF DK+SDFLAFVNLW+YL EQQKALSS FR+LCR+DYLNYLRVREWQDIYTQLRQVV Sbjct: 541 RRFADKDSDFLAFVNLWDYLKEQQKALSSAQFRKLCRSDYLNYLRVREWQDIYTQLRQVV 600 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYT 645 KELGIPVNS A+YR +H A+LTGLLSHIG KD +KQE+T Sbjct: 601 KELGIPVNSVAADYRSVHTAILTGLLSHIGQKDVEKQEFT 640 >UniRef50_C7QZ06 ATP-dependent helicase HrpA n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZ06_JONDD Length = 1435 Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/1380 (43%), Positives = 819/1380 (59%), Gaps = 158/1380 (11%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 ITYP++LPVS +++ I +A+R+HQV+IVAGETGSGKTTQ+PKI +ELGRG G IGHTQP Sbjct: 51 ITYPESLPVSAQRERIAQALREHQVIIVAGETGSGKTTQIPKIALELGRGRAGQIGHTQP 110 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA RIA+EL T+ G +GY+VRF+D S++T+VK+MTDGILLA+IQ+D L+ Sbjct: 111 RRIAARSVAERIADELGTQIGKIVGYQVRFTDESSEDTLVKVMTDGILLAQIQRDPQLLA 170 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------- 243 YDT+IIDEAHERSLNIDFLLGYL LLP+RPDLK+IITSATID RF+ HF + Sbjct: 171 YDTLIIDEAHERSLNIDFLLGYLTNLLPQRPDLKVIITSATIDSARFAEHFASPGPNGER 230 Query: 244 ------------APIIEVSGRTYPVEVRYRPIVEEA----------DDTERDQLQAIFDA 281 AP+IEVSGRTYPVE+RYRP+ EA + + D + ++ A Sbjct: 231 GPDAVASGLATPAPVIEVSGRTYPVEIRYRPLDGEALGVADGQGNRSNDDPDLMTSLCAA 290 Query: 282 VDELSQESHGDILIFMSGEREIRDTADALNK-LNLR--------HTEILPLYARLSNSEQ 332 DEL E GDIL+F+SGER+I D DAL L R +TEI+PL+ARLS +EQ Sbjct: 291 TDELMLEGPGDILVFLSGERDIHDAHDALTAHLGARATDPRDPGYTEIVPLFARLSAAEQ 350 Query: 333 NRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 +R+FQSHS RRIVLATN+AETSLTVPGI+YVIDPGTARISRYS TKVQRLPIEPISQAS Sbjct: 351 HRIFQSHSHRRIVLATNIAETSLTVPGIRYVIDPGTARISRYSKTTKVQRLPIEPISQAS 410 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDI 448 ANQR GRCGRV+EGI IRLYS++DF +RPEFT+PEILRT+LASVIL M ++G+ DI Sbjct: 411 ANQRSGRCGRVAEGIAIRLYSQEDFQARPEFTEPEILRTSLASVILHMVSVGVVRTPDDI 470 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE 508 A+FPFV+ PD + ++DGV LL+EL A+++ ++ + LTP+GRQL+ LP+DPRLARM++E Sbjct: 471 ASFPFVDPPDTKAVRDGVALLQELSALSSGKRGT--TLTPVGRQLAALPIDPRLARMIVE 528 Query: 509 AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 A + G E +II +ALSIQDPRERP + + +D HRRF + SDFL ++N+W Y+ Q Sbjct: 529 ANRRGVAGEVLIIAAALSIQDPRERPAEVRDEADTCHRRFVEGRSDFLTYLNMWEYVRSQ 588 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE---------- 618 QKALSS+AFRR+CR +YLN+LR+REWQD+ +QLR + + LGI V A+ Sbjct: 589 QKALSSSAFRRMCRREYLNFLRIREWQDVVSQLRDMARPLGITVTHRSAQPVGDALTTSE 648 Query: 619 -----------YREIHIALLTGLLSHIGMKDAD---------------------KQEYTG 646 IH ++L GLLS IGM+++ + EY G Sbjct: 649 DTSVDTRFVWDGEAIHRSILAGLLSQIGMQESTDVSATRKGKDAAQDRRAARMARNEYLG 708 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSE 706 +R +F+IFPGS L +KPP WVM A+LVETSRLW R A I+PEW E +AQ ++KRTYS+ Sbjct: 709 SRGTKFAIFPGSSLSRKPPTWVMAAQLVETSRLWARDVAAIEPEWAEELAQGIVKRTYSD 768 Query: 707 PHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFF 766 P W +GA M EKV +YG+PIV R + YS +D R++FIRHALV+G W T HAF+ Sbjct: 769 PAWSTKRGAAMVREKVMLYGVPIVTERPILYSHVDRDAARDMFIRHALVDGQWTTHHAFW 828 Query: 767 RENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPD 826 R N + AEVEE ++R + VDD L+EFYD R+ V+SA HFD WWK + P Sbjct: 829 RHNKAVIAEVEEFYARTRATQLEVDDTVLYEFYDARLPDSVVSAAHFDRWWKDTRKTEPT 888 Query: 827 LLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQV 886 LL+ + L+ ++ YP W QG+L ++Y + PG DG+TVHIP+ +LN+V Sbjct: 889 LLDLHRDDLLPAVDDEQVDALYPTSWPQGDLTFPITYSYTPGHSTDGLTVHIPIEVLNRV 948 Query: 887 EESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA---FLGRVKPLELPLLDS- 942 E GF+W +PGL EL IA IKSLPK RR VPAP+ A A +L P L+ Sbjct: 949 EAGGFDWLVPGLLTELCIATIKSLPKTWRRQLVPAPDTARAIATWLTERHPSWADLVRGG 1008 Query: 943 ---------LERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKK-------LKEG 986 + + V + + + +P H++I F V N+ L + Sbjct: 1009 NHAPQFHAEFTQAAYALRSVDIPADAYTPHTLPPHVRIMFSVEHTVNRGRRTVTEVLDQS 1068 Query: 987 RSLQDLKDALKGKVQETLSAVADDGIEQS--------------------------GLHIW 1020 SL+ L+ L QE +++ + + H Sbjct: 1069 PSLEHLQRTLSSHAQEAVASAVHTAVSAALAEARAAATPTPVPTGSTTTPRTPVRAQHHA 1128 Query: 1021 SFGQLPESYEQKRGNYKVKAWP------------------------ALVDERDSVAIKLF 1056 S P + + V WP AL D V + + Sbjct: 1129 STSTPPPAPALADSSDIVTDWPTAYPTIPLILDGTGPGGFAVRGYPALAVHPDGVRLDVL 1188 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 + +Q + L++ + + + L + +PY LI D Sbjct: 1189 AHDAQQATIHGQAVVELVVAATALSTSRISTRWSPRQALVMSTSPYPTTDALITDLQRAA 1248 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 + L+ + G + + + +VRA + D IA V LTAV +++ +K + Sbjct: 1249 IRSLL-PDAGTIRDVDTYRERVVQVRARIEDETYRIAGDVAAALTAVKDLDAAIKQHTSL 1307 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 + L+DI+A L+Y GF++ + +RY++A RL+K HRD+ + Sbjct: 1308 ALLATLNDIRAIRDALIYPGFISRTPPDHVRHLVRYVRAQIHRLDKAVDSVHRDQEVSWR 1367 Query: 1237 VENVQQAWQQWINKLPPARRE-DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 + V + + + + E + ++RWMIEELRVS +AQQLGT +S+KR+L+A+ Sbjct: 1368 LAEVTRMYDAAVASASASPHGVSEQLADVRWMIEELRVSMYAQQLGTARTVSEKRVLKAI 1427 >UniRef50_Q31H28 ATP-dependent helicase HrpA n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31H28_THICR Length = 1342 Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/1334 (44%), Positives = 836/1334 (62%), Gaps = 61/1334 (4%) Query: 10 TALQQRLDSLMLRDRLRFSRRLH-----------GVKKVKNPDAQQAIFQEMAKEIDQAA 58 +A+ + +D +++DR S+++ + +KN A +AK + Sbjct: 25 SAVIKAVDQALVKDRFFLSKQIQRFNVHANTSEADFEALKNDQAWLKFCDRLAKSV---- 80 Query: 59 GKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG 118 V + A P+ITY DNLPV++++ +ILE I+++QVV++AGETGSGKTTQ+PKIC+E G Sbjct: 81 ATVQKNQQAVPKITY-DNLPVAERRDEILELIQNNQVVVIAGETGSGKTTQIPKICLEAG 139 Query: 119 RGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGIL 178 RG+ G IG TQPRRLAAR+VA RIAEEL + G +GY+VRF D V +++K+MTDGIL Sbjct: 140 RGVFGRIGCTQPRRLAARSVAERIAEELGSSLGQLVGYQVRFHDQVHQQSLLKVMTDGIL 199 Query: 179 LAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFS 238 LAEIQ D L QYDTIIIDEAHERS+NIDFLLG LK+LLP+R DLK+IITSATID ERF+ Sbjct: 200 LAEIQNDPYLNQYDTIIIDEAHERSINIDFLLGILKKLLPKRRDLKLIITSATIDTERFA 259 Query: 239 RHFNNAPIIEVSGRTYPVEVRYRPIV----EEADDTERDQLQAIFDAVDELSQ-ESHGDI 293 F APIIEVSGRTYPVEVRY P+V +E ++ E+D AI A++ELS+ + GD+ Sbjct: 260 SFFEGAPIIEVSGRTYPVEVRYNPLVKIEDDEGNEFEQDIPTAIVYALEELSEIDPFGDV 319 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 L+F GER+I++TA+ L K NL++TEI+PLYARLS +EQN+VFQ+ RR++L+TNVAET Sbjct: 320 LVFQVGERDIKETAEVLRKQNLKNTEIVPLYARLSMAEQNKVFQTSQKRRVILSTNVAET 379 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLTVPGIK+VIDPG RISRYS R+KVQRLPIE ISQASANQR GRCGRVS G+CIRLY Sbjct: 380 SLTVPGIKFVIDPGLVRISRYSVRSKVQRLPIEKISQASANQRAGRCGRVSSGVCIRLYD 439 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 EDDF SRPEFT PEI RT+LA+VILQMT + LG + FPF+E P+ + I DG R L E+G Sbjct: 440 EDDFKSRPEFTPPEIHRTSLATVILQMTQMKLGSVKHFPFIEPPEDKAINDGFRQLHEIG 499 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ DE+ +LT GR L++LP+DPR+A+MVLE QK+G + E +II +A+SIQDPR+ Sbjct: 500 AL--DEKR---RLTESGRHLAKLPLDPRMAKMVLEGQKNGVLAEVLIIAAAISIQDPRDM 554 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 +QA+++ H+ F D SDFL F+NLW + ++++ LS N R+LC+T++L+YLR++E Sbjct: 555 NESNRQAANQAHKVFEDPRSDFLFFLNLWRFYEDKRRHLSQNKLRKLCKTNFLSYLRMKE 614 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYRE------------------IHIALLTGLLSHIG 635 W D++ QL +K + + V E Y E +H +L+ GLL +I Sbjct: 615 WHDLFFQLEMSLKRISVKV-GELHLYEEVKKGKTVTERLSDTHSMAVHRSLMAGLLGNIA 673 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 M+D D+ Y GARN + I P S LFK+ PKW++ ELVET++L+ R A ID WVE + Sbjct: 674 MRD-DENSYLGARNTKLFIHPSSVLFKRKPKWMLSGELVETTKLYARNNAIIDVNWVEAI 732 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 A HLIK +Y++PHW++ G V A E VT+YGLPIV R+ NY I+P R++F+RH LV Sbjct: 733 APHLIKHSYTDPHWQKKAGQVGAFESVTLYGLPIVNRRRCNYGPINPKEARKIFLRHGLV 792 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 EG+ ++ AFF N K+ AE+ +E K RR D LV+++ L++FY + I + S F+ Sbjct: 793 EGELNSKVAFFVHNQKMIAEIHHIESKLRRPDFLVEEDVLYDFYAKHIPEHIYSLPAFEK 852 Query: 816 WWKKVSRETPDLLN---FEKSMLIKEGAEKISKLDYPNFWHQGN-LKLRLSYQFEPGADA 871 W +K + P+ L + L+K+ + ++YP+ N L L + Y FEPG Sbjct: 853 WVRKTEKTDPEALKALYLTQEFLLKQSYDSRLDVEYPDQVQIKNQLDLDVDYFFEPGKAQ 912 Query: 872 DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGR 931 DG+ V +PL LN V+ FEW PGL +E IK+LPK +R+ F+PAPN AE L Sbjct: 913 DGMVVKVPLSALNLVQAEDFEWLTPGLLKEKTAFYIKALPKQLRKQFIPAPNTAELVLKE 972 Query: 932 VKP------LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 + P + + L L R V D+ ++P++L+ F + DDK KK+ E Sbjct: 973 MAPNKKLDGRKANYVTQLVWALNRRAQQKVTSHDFEAVELPEYLEPYFVLQDDKGKKIAE 1032 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGI-EQSGLHIWSFGQLPESYEQKRGNYKVKAWPAL 1044 L+ LK + V + + E + W FG L +S + ++ A+PAL Sbjct: 1033 KADLEALKTEYQHLVDARIQKHQSKKMPENRIIESWDFGDLADSQTIRSQGIEMVAYPAL 1092 Query: 1045 VDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 D++ + L + + + L+ + KYL +KLP + K L + PYG Sbjct: 1093 QVSGDTIELALLGDEDSAQAHHAEAVLALIKKELVEKEKYLQKKLPMQ-KACLCYAPYGT 1151 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 EL I + +L+ + + + F A+ E R++ + IA QV ILTA Sbjct: 1152 CQELTQQVIDRALFQLV-PHPEKIRKQTEFEAILETARSKWIEQAQQIASQVNTILTAHQ 1210 Query: 1165 NINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA 1224 I K++KG V+ ++DI+ Q+ L+ + FV + RYLQ +EKRL K+ Sbjct: 1211 KIAKQVKGNVNPRWLASVADIRTQLDQLISKDFVRVTPEEWFKQLPRYLQGLEKRLAKID 1270 Query: 1225 VDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPY 1284 VDP +D+ + +++ + A++ + PA + + EIRW+IEELR+S FAQ + T Sbjct: 1271 VDPSKDQKAIREIQPILDAFETLAKE--PAYQNHSGLVEIRWLIEELRLSLFAQPMKTLK 1328 Query: 1285 PISDKRILQAMEQI 1298 P+S +R+ + ++ + Sbjct: 1329 PVSIQRLQKKLKTL 1342 >UniRef50_Q2Y975 ATP-dependent helicase HrpA n=2 Tax=Proteobacteria RepID=Q2Y975_NITMU Length = 1329 Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 593/1318 (44%), Positives = 817/1318 (61%), Gaps = 90/1318 (6%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R A P+ YP+ LPV +Q+I +AI+ +QVVI++GETGSGKTTQLPKIC+ELG G+ Sbjct: 17 RLANLPKPAYPEELPVVALRQEIAQAIQKNQVVIISGETGSGKTTQLPKICLELGWGLHA 76 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 +IGHTQPRR+AARTVA RIA ELK+ G +GYKVRFSD VS T VKLMTDGILLAE Q Sbjct: 77 MIGHTQPRRIAARTVAARIASELKSPLGHAVGYKVRFSDKVSPETYVKLMTDGILLAETQ 136 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L+ YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+I+TSATI+ ERFS HF+N Sbjct: 137 GDPNLLAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIVTSATINSERFSAHFHN 196 Query: 244 APIIEVSGRTYPVEVRYRPI----------------------------------VEEADD 269 AP+IEVSGR YPVEVRYRPI ++ D Sbjct: 197 APVIEVSGRMYPVEVRYRPIEAPARAASAIAEDRNEDKAGNKTRDKDKDRQKDKHKDRDR 256 Query: 270 TERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNL-------RHTEILP 322 E D QAI DAVDE+++ GD+L+F+ GEREIRDTA+AL K EILP Sbjct: 257 DEGDIEQAILDAVDEINRCGPGDVLVFLPGEREIRDTAEALRKHAFGGPGTGRAGAEILP 316 Query: 323 LYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 L+AR S ++Q RVF+ S RRIVLATNVAETSLTVPGI+YVID G ARI RYSYR KV Sbjct: 317 LFARQSYADQERVFKPGGSSLRRIVLATNVAETSLTVPGIRYVIDTGVARIKRYSYRNKV 376 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQM 440 ++L +E IS+ASANQR GRCGRV GIC RLYSE D+L+RPEFTDPEILR++LA+VIL+M Sbjct: 377 EQLQVEKISRASANQRAGRCGRVMSGICFRLYSEQDYLARPEFTDPEILRSSLAAVILRM 436 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 +L +G I FPF+E P R I DG +LL ELGA+ DE + LT +G +L++ P+DP Sbjct: 437 KSLKIGSIENFPFLEPPLPRMIADGYQLLAELGAV--DESNT---LTSIGWRLARFPIDP 491 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 R+ARM+L A++ C+ E +II SALS+QDPR+RP ++Q+A+D H+ F D+ SDFL ++ Sbjct: 492 RIARMILAAKEENCLTEMLIIASALSVQDPRDRPFERQEAADRAHQSFQDERSDFLGYLK 551 Query: 561 LWNYLGEQQKALSSNAFRRL---CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA 617 LW++ + K SN R+L C+ ++L++ R+REW++++ QL +V E G N PA Sbjct: 552 LWDFFDDLLKHKKSN--RKLIEQCQENFLSHRRMREWREVHGQLHTLVVETGFKPNKIPA 609 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 Y EIH ALL GLL +IG + + EY G R +FSIFPGS L K PKW++ AEL ET+ Sbjct: 610 NYDEIHRALLAGLLGNIGFRIDEDNEYLGTRGIKFSIFPGSVLKKAKPKWIVAAELTETT 669 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNY 737 RL+GR A+IDP WVE + K+ Y +PHWE+ V A E+VT+YGL +V R+V Y Sbjct: 670 RLYGRGVAKIDPAWVERIGGKFCKKHYFDPHWEKKSAQVSAFERVTLYGLTVVPKRRVYY 729 Query: 738 SQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 I+P RE+FIR ALV G++ T+ FF+ N +L A V LEHK+RR D+LVD++ +F Sbjct: 730 GNINPKEAREIFIRSALVAGEYITQAPFFKHNHELIANVAALEHKTRRPDVLVDEQEIFV 789 Query: 798 FYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNL 857 FYD I + + F+ W ++ RE LL K L++ A+ +++ +P+ Sbjct: 790 FYDGLIPEGISNGAAFEKWHREAERENSRLLYIPKEYLMRHTAQSVTEERFPDTMLVDGF 849 Query: 858 KLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRN 917 L L+Y+F+PG DGVT+ +PLPLLN+++ + F+ +PGL RE + +++LPK +RR+ Sbjct: 850 PLSLTYRFDPGHVLDGVTITVPLPLLNKLDATQFDSLVPGLVREKITWYLRALPKQIRRH 909 Query: 918 FVPAPNYAEAFLGRV---------KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDH 968 VP P + FL +P L ++L R +R TG+TV + W ++ P H Sbjct: 910 VVPVPEFVTQFLESAEHAAATSPPEPSPSLLTETLARFIRTKTGLTVPPDAWD-EKPPSH 968 Query: 969 LKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLS---AVADDGIEQSGLHIWSFGQL 1025 L + +++VDD ++L R L LK L Q T S + + +E+ + W FG L Sbjct: 969 LMMNYKIVDDAGQELAMNRDLGQLKTQLGQAAQLTFSRSESGEHNPLERDDVKHWDFGDL 1028 Query: 1026 PESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYL 1085 P+ R + +PAL + VAI+LFD + +M G+R+LL + +K L Sbjct: 1029 PQEITFTRAGKNMTGFPALAERDGKVAIRLFDTREAAELSMRGGVRQLLGFELKEQMKQL 1088 Query: 1086 HEKLPNK----------AKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 + L + A+ + K +L +D ++ D+ A+ +E+ F Sbjct: 1089 EKDLSGQGAKSGKGRYLAQAAFQLHTLIKPEQLKEDILNAVADRAFIADDALPRSEKEFV 1148 Query: 1136 ALHEKVRAEL---NDTVVDIAKQV---EQILTA-VFNINKRLKGRVDMTMALGL------ 1182 A ++ R L ++ +V I + V Q+L A + +I K V T A Sbjct: 1149 AQRQRARTRLPAVSEALVRIVQNVASESQVLMARISSIGGTGKVGVQKTGAASGGGSGNP 1208 Query: 1183 -SDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQ 1241 +D+ Q+ LVY GF++ ++RL RYL+ + RL+K +P RD + + Sbjct: 1209 GADLMIQLRNLVYPGFLSATPWERLQHLPRYLKGMILRLDKYDANPERDARHAAAIAGLW 1268 Query: 1242 QAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 ++Q + K AR +D + E RW IEELR+S FAQ+L TP P+S KR+ + E+I+ Sbjct: 1269 NRYEQRLEKHRKARIDDPRLVEFRWQIEELRISLFAQELKTPSPVSAKRLQKLWEEIN 1326 >UniRef50_Q3SHC5 ATP-dependent helicase HrpA n=3 Tax=Betaproteobacteria RepID=Q3SHC5_THIDA Length = 1275 Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/1258 (46%), Positives = 788/1258 (62%), Gaps = 53/1258 (4%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 ITYPD LPV+ ++ DIL A+ H+V+I+ GETGSGKTTQ+PK+C+E G LIG TQP Sbjct: 20 ITYPD-LPVAARRDDILAALERHRVLILCGETGSGKTTQIPKMCLEAGIPPGKLIGCTQP 78 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA RIA+EL +E GG +GYKVRFSD V +T +K+MTDGILLAE Q D LL + Sbjct: 79 RRIAARSVAARIAQELGSELGGLVGYKVRFSDKVRPDTAIKVMTDGILLAESQGDPLLSR 138 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTII+DEAHERSLNIDFLLGYLK LL +R DL++++TSATID ERFS+HF++AP+IEVS Sbjct: 139 YDTIILDEAHERSLNIDFLLGYLKTLLDKRADLRVLVTSATIDAERFSKHFDDAPVIEVS 198 Query: 251 GRTYPVEVRYRPIV-----------EEADDTER------DQLQAIFDAVDELSQESHGDI 293 GR YPVE+R+RPI EA+ R DQ+ AI DA DEL++ GDI Sbjct: 199 GRLYPVEIRWRPIARDDEAGAPGNKREAEKPGRTYKDGPDQIAAILDATDELARLGPGDI 258 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAE 352 L+F+ GEREIRDTA+AL K + TEILPL++RLS +EQ+ +F+ S RRIVLATNVAE Sbjct: 259 LVFLPGEREIRDTAEALRKHHPPGTEILPLFSRLSVAEQDAIFKPTSALRRIVLATNVAE 318 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TSLTVPGI+YVIDPGTAR+ RYS R KV++L IE +SQASANQR GRCGRV++G+CIRLY Sbjct: 319 TSLTVPGIRYVIDPGTARVKRYSARNKVEQLLIEKVSQASANQRAGRCGRVADGVCIRLY 378 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 E DF +RP FTDPE+LR++LA VIL+M +LGLGD+ FPF++ P R + DG +LL EL Sbjct: 379 DEADFSNRPRFTDPELLRSSLAGVILRMKSLGLGDVVGFPFIDPPSSRLVTDGYQLLGEL 438 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 A+ DEQ +LT +GRQL++LP+DPR+ARM+L A++ CVRE +II SALS+QDPR+ Sbjct: 439 HAL--DEQG---QLTKIGRQLAKLPLDPRIARMLLAAEQQRCVREILIIASALSVQDPRD 493 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLRV 591 RPM++ QA+DEKH+ F D+ SDF+ ++ LW + EQ Q ++ + L + +L+ R+ Sbjct: 494 RPMERAQAADEKHKLFQDERSDFMGWLRLWRWYEEQVQHKKTNRQLQTLLQDHFLSPRRM 553 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQ--------- 642 REW+DI+ QL V ELG+ N + A Y IH ALL+GLL +IG K D + Sbjct: 554 REWRDIHGQLHAQVAELGLRENEKDAGYDAIHQALLSGLLGNIGFKSDDGRAKTGAGRPK 613 Query: 643 ----EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 Y GAR + SI PGS L KK PKW+M AEL +T RL R A + PEW+E +H Sbjct: 614 PGEGNYLGARGIKLSIHPGSALAKKGPKWIMAAELTDTGRLLARTVAEVRPEWIEGAGRH 673 Query: 699 LIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD 758 L+ R Y EPHWE+ V+A E+V++YG+ +V RK++Y IDP L RELFIR ALV GD Sbjct: 674 LLTRMYIEPHWEKDGARVVAWERVSLYGITLVPRRKIHYGPIDPELARELFIRGALVAGD 733 Query: 759 WQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWK 818 + TR +F N L E+E+LEHK+R+ + +D+ ++ +D R+ + + F+ W Sbjct: 734 YDTRAPWFAHNRALIQEIEDLEHKARKSGVWLDEARIYGIFDARVPAGIHNGVAFEKWRA 793 Query: 819 KVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHI 878 + P L + ++ EG L +P + L Y+FEPG DGVT+ + Sbjct: 794 EAEAADPRTLFLRREDILGEGLGADHTL-FPESMQVDGVMCALKYRFEPGHPLDGVTLRV 852 Query: 879 PLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELP 938 PL LLN++E +W +PGL RE + AL+K LPK RR +P P+ AFL +P E Sbjct: 853 PLYLLNRIEAPQIDWLVPGLIREKLTALLKFLPKDKRRPLIPLPDTVTAFLSSAQPGERV 912 Query: 939 LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKG 998 L ++L +R+ TG + +DW ++P HLK+ VVDD ++L GR L L+ L G Sbjct: 913 LTEALAAFVRKKTGADIHPDDWR-GELPAHLKMNLCVVDDSGQELASGRDLGALRQQLGG 971 Query: 999 KVQETL-SAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 + T AD E++GL W FG LPE + KRG ++ +PALVD SV ++L D Sbjct: 972 AARITYGGGAADSEFERTGLLEWDFGDLPEQVKFKRGGRELTGYPALVDTGTSVDLRLID 1031 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGV 1117 + G+ RLL L + + K L + L + L L F G L + Sbjct: 1032 TAEAARGETRRGVIRLLRLALAAQFKQLDKDLGRETALALKFRTLGSPETLRAHLLDAIA 1091 Query: 1118 DKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 + + + + FA E+ + + + + V +IL + RL + T Sbjct: 1092 ARALLGDDETPRDAKAFARQKERAKPRVAVVKQALLRDVAEILDLHAQVAARLAAKPQFT 1151 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 + D A + LV F+T + RL D RYL+ I KRLEKL RD M V Sbjct: 1152 AV--MRDETAHLAALVPSDFITATPWPRLKDLPRYLRGILKRLEKLPAAEQRDARAMAGV 1209 Query: 1238 ENVQQAWQ----QWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +Q +Q Q +LP A + + RW +EELRVS FAQ+L TPYP+S KR+ Sbjct: 1210 LTLQNKYQARRAQVRGELPAA------LDDFRWQLEELRVSLFAQELKTPYPVSVKRL 1261 >UniRef50_Q47AH6 ATP-dependent helicase HrpA n=7 Tax=Betaproteobacteria RepID=Q47AH6_DECAR Length = 1329 Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/1304 (44%), Positives = 819/1304 (62%), Gaps = 43/1304 (3%) Query: 28 SRRLHGVK---KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQ 84 +RRL ++ + + + QQ + ++A I+++ V R A P+ + +LPV++++ Sbjct: 33 ARRLSSLRAELRRSSGEKQQKLQADLAALIERSRAAVQERRAKLPKPEFQTDLPVNERRA 92 Query: 85 DILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAE 144 DI E I ++QVVIV GETGSGKTTQLPKIC++LG G +GLIGHTQPRRLAAR+VA R+A+ Sbjct: 93 DIAELIANNQVVIVCGETGSGKTTQLPKICLDLGIGARGLIGHTQPRRLAARSVATRLAQ 152 Query: 145 ELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSL 204 ELKT+ G +G K+RF D + + VKLMTDGILLAE Q D L Y+ IIIDEAHERSL Sbjct: 153 ELKTQVGAGVGVKIRFHDKSTSESWVKLMTDGILLAESQSDPYLNAYEAIIIDEAHERSL 212 Query: 205 NIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----NAPIIEVSGRTYPVEVRY 260 NIDFLLGYLK+LLP+RPDLK+IITSATID ERFS+HF+ +AP+IEVSGR +PVEVRY Sbjct: 213 NIDFLLGYLKQLLPKRPDLKLIITSATIDAERFSQHFSAHGKSAPVIEVSGRLFPVEVRY 272 Query: 261 RPIVE-EADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK------- 312 RP+V+ + D ERD AI DA DELS+ GDIL+F+ GEREIR+ A+AL K Sbjct: 273 RPVVDIDKKDDERDLYDAIVDAADELSRLGSGDILVFLPGEREIREAAEALRKHALARPG 332 Query: 313 LNLRHT-EILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVIDPGTAR 370 L+ H EILPL++RLS +Q+R+F+ G RRIVLATNVAETSLTVPGI+YVID G AR Sbjct: 333 LSSAHAPEILPLFSRLSAGDQDRIFKPSGGQRRIVLATNVAETSLTVPGIRYVIDTGLAR 392 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 + RYSYR KV++L +EPISQA+A QR GRCGRV+ G+C+RLY E DF +R FTDPEILR Sbjct: 393 VKRYSYRNKVEQLQVEPISQAAARQRAGRCGRVAAGVCVRLYDEADFNARAPFTDPEILR 452 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 ++LA VIL+M +L L D+ +FPF+E P + I DG LL+ELG + D +LT +G Sbjct: 453 SSLAGVILRMKSLKLTDVESFPFIEPPPAKAISDGYALLQELGGLDDDN-----RLTKVG 507 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 L++LP+DPR+ RM++ A+ GC++E +II + LS QDPRERP ++QQA+DEKH++F D Sbjct: 508 DALAKLPLDPRIGRMLVAARDLGCLKEVLIIAAGLSTQDPRERPQERQQAADEKHKQFAD 567 Query: 551 KESDFLAFVNLWNYLGEQQKALSSNAFRRL---CRTDYLNYLRVREWQDIYTQLRQVVKE 607 ++S+FL++V LW + + SN ++L C +L+YLR+REW++++ QL +V E Sbjct: 568 EKSEFLSWVKLWGWFQNVVEHKKSN--KQLIDNCHAHFLSYLRLREWREVHGQLHAMVTE 625 Query: 608 LGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKW 667 LG N P + IH ALLTGLL +IG K + Y GAR R+ I P S L KK KW Sbjct: 626 LGWKENDLPGTFDAIHQALLTGLLGNIGCKSDESGYYLGARGIRYLIHPSSPLQKKAGKW 685 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 +M AE+ ET+RL+GR ARI+ +W+E V HLIKR Y +PHWE+ V E+ T+YG+ Sbjct: 686 IMAAEITETTRLFGRCVARIEADWIEKVGAHLIKRQYFDPHWEKKSMQVAGWERTTLYGI 745 Query: 728 PIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHA----FFRENLKLRAEVEELEHKS 783 I R+++Y + PA RE+FIR LV + A FF+ N K ++E++EHK Sbjct: 746 VINPKRRIHYGPLAPAEAREIFIRQGLVGEEIDESFAKCWPFFQHNQKQIRDIEKIEHKQ 805 Query: 784 RRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKI 843 RR+D+LVDDE +F FYD I + + FD W K +E P LL K L++ A + Sbjct: 806 RRQDVLVDDELIFGFYDHLIPEGIHNGATFDHWRKTAEQENPKLLFLSKDDLMRHSAAGV 865 Query: 844 SKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELV 903 + +P+ G ++ L+Y FEPG+ DGVT+ +PL LNQ+ EW +PGL +E + Sbjct: 866 TTEAFPHHIKVGGVEYGLTYHFEPGSPRDGVTLTLPLAQLNQIPVLRMEWLVPGLLKEKL 925 Query: 904 IALIKSLPKPVRRNFVPAPNYAEAFLGRV--------KPLELPLLDS-LERELRRMTGVT 954 + LIK+LP+ +R VP P + E F+ + L PL+D LE G Sbjct: 926 VQLIKTLPQKIRAKLVPVPEFVEEFIAATAGNDKKMNQGLIPPLIDYILEARGLNARGWA 985 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 V + + D +P H + ++++D+ ++L RSL L+ + +E + + + E Sbjct: 986 VTPDAFRPDALPPHFSMNYKLIDEHGRQLDMNRSLLALRGEWGKEAKEEFADLHETPSEY 1045 Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 + L W+FG+LPE E G V +PAL DE ++V++K+FD+ E + GL RL Sbjct: 1046 TQLTDWTFGELPELMEVPVGKQTVIGYPALSDEGETVSLKVFDSAEEAAETHRKGLARLF 1105 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 +L ++Y + +P ++G+ + P G EL + ++ P T E F Sbjct: 1106 MLQFKEQVRYFDKNVPGLTQMGMQYMPLGSTDELKRQLVDLSFERACLTEPLPT-TPEAF 1164 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 A + +A L + ++ + V +LT + K+L A ++DI+AQ+ L+ Sbjct: 1165 KARCAEAKARLGLIMQEVCRMVGTVLTEWQAVTKKLPAFKAHAAA--VADIEAQLKRLLG 1222 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPA 1254 + FV F+RL RY++AI RL+KL +P RD M + + +++ +L Sbjct: 1223 KNFVVDTPFERLQHYPRYMKAIVVRLDKLKANPARDAQLMAEYGPLWSNYERRAIQLAKL 1282 Query: 1255 RREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 D V++ RW++EELRV +AQ+L TP P+S KR+ + E I Sbjct: 1283 GTLDPQVEQFRWLLEELRVGLYAQELRTPVPVSTKRLQKQWEGI 1326 >UniRef50_B8KHJ8 ATP-dependent helicase HrpA n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHJ8_9GAMM Length = 1254 Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 568/1238 (45%), Positives = 801/1238 (64%), Gaps = 32/1238 (2%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 A P ++YP +LPV++ +Q+I +A+R+HQVVIVAGETGSGKTTQLPKIC+ELGRG IG Sbjct: 14 AIPPLSYPSDLPVAEHRQEIADALREHQVVIVAGETGSGKTTQLPKICLELGRGRLQRIG 73 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRRLAARTVA RIAEE+ G +GY+VRF + + D T VKLMTDGILL+E+Q+DR Sbjct: 74 HTQPRRLAARTVAQRIAEEVGQPLGELVGYQVRFQEILGDRTAVKLMTDGILLSEMQRDR 133 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L QYDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+++TSATID RFS HFN AP+ Sbjct: 134 DLRQYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVLVTSATIDVGRFSEHFNGAPV 193 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH---GDILIFMSGEREI 303 IEVSGR+YPV Y P ++ ++E D L+ + V E+ H GD+L+F+SGER+I Sbjct: 194 IEVSGRSYPVTTHYLP--RDSSNSE-DLLRQVASVVKEVQAGIHGTPGDMLVFLSGERDI 250 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGR--RIVLATNVAETSLTVPGIK 361 RD A L ++LPLYARLS EQ RVF S R R+VL+TNVAETS+TVPGI+ Sbjct: 251 RDVARQLR--GAAGLDVLPLYARLSQGEQARVFGRGSARGLRVVLSTNVAETSVTVPGIR 308 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 +VIDPG ARISRYSYRT+VQRLPIEP+S+ASA+QR+GRCGRV GIC+RLY+E+D+L+RP Sbjct: 309 FVIDPGEARISRYSYRTRVQRLPIEPVSRASADQRRGRCGRVGPGICLRLYTEEDYLNRP 368 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 +FTDPEI R+NLA+V+LQM LGLGDI FPF+E PD R I+DG RLL+ELGA+ EQ Sbjct: 369 QFTDPEIKRSNLAAVVLQMLQLGLGDITKFPFLEPPDSRLIRDGYRLLDELGAVNQREQ- 427 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 LT LGR+++ P+DP L+RMVL AQ+ + E ++I SALSIQDPRERP D+Q + Sbjct: 428 ----LTRLGRRMAAFPIDPSLSRMVLAAQEFSVLPEMLVIASALSIQDPRERPADRQAQA 483 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 D+ H RF D SDF++ +NLW Y EQ++ LS N R+LC+ +YL++LR+REW+D++ Q+ Sbjct: 484 DQSHARFADPRSDFMSLLNLWRYYEEQRQTLSENKLRKLCKREYLSWLRMREWRDVHRQI 543 Query: 602 RQVVKELGIPVNSEPA---EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 + G+ E A +Y +H ALL+GLL +I +D +++EY RN R +FPGS Sbjct: 544 SIACRSQGLKPALELAPETDYAGVHRALLSGLLGNIAQQD-ERREYLATRNRRLQLFPGS 602 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 +++KPPKW++ E+VET R++ R AA I+P+W+ V L+K Y EP W+R QG V+A Sbjct: 603 VVYRKPPKWLVAGEIVETQRVYARTAASIEPQWLMQVNPALLKHQYYEPRWQREQGRVVA 662 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 K T++GL I V+Y++IDPALCREL IR AL+ G W AF + NL+L+ EVE+ Sbjct: 663 WRKTTLFGLTISDRVAVHYAKIDPALCRELLIREALIAGRWTKPPAFLKHNLRLQREVED 722 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE ++RRRD+LVD++TLF+FYD+ + + +W K+ S L +L ++ Sbjct: 723 LESRARRRDLLVDEDTLFQFYDELLPTHATNTTSLVAWIKEDSNRGTALKLRRDQLLTRD 782 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 +P+ + RLSYQF PG +ADGV++ +P+ LLN++ +W +PG+ Sbjct: 783 PGALTDA--FPDRLEWEDQSYRLSYQFSPGKEADGVSITVPVALLNRLPRFRLQWLVPGV 840 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958 RE IAL+K LPKP+R+ VP P++ + L ++P ++PL ++L L++ G + Sbjct: 841 LREKCIALLKGLPKPLRKQLVPVPDWVDRALQYMQPTDVPLTEALGGALKQAGGPLIAAS 900 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 DW + V D+ ++ RVVDDK K L + R + L + ++ L+ + ++GL Sbjct: 901 DWP-EIVDDYYRMNLRVVDDKGKLLAQHRDVDALIKEFEEATRQQLTTEDGNSPARTGLL 959 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 +W F +L Y K+ + A+PALVD ++SV+I+LFD P E A GL RLL+L+ Sbjct: 960 LWDFPRLEREYGFKQAGVDILAYPALVDAQNSVSIELFDYPGEALLAHRRGLARLLMLSS 1019 Query: 1079 PSPIKYLHEK-LPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 + ++ L + A L+ +L+D+ + + G ++ F Sbjct: 1020 KPLFRDFRKRFLKDNATALLFVALDVSRDDLLDELLPTLALNAGEVLDGDCRDKDQF--- 1076 Query: 1138 HEKVRAELNDTVV----DIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLV 1193 E +++ T V D Q++ L A+ + + L+ D A +DI AQ L+ Sbjct: 1077 -ETASRQMSRTAVGLGNDYEAQLKNTLAAMADAVRILQRYTDQ-YAQAKADITAQRSFLL 1134 Query: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPP 1253 RG + G L RY +A+ R E+LA + +D+ + +++ + + P Sbjct: 1135 SRGGLFGLASDELRHFPRYAKAMAVRAERLAANYRKDQEHQATLASLEAPMFELLAAQPG 1194 Query: 1254 ARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 A + + + M++ELRVS FAQ LGT P+S KR+ Sbjct: 1195 AAQLSPSLHTFQIMLQELRVSLFAQHLGTSRPVSVKRL 1232 >UniRef50_A6C1G8 ATP-dependent helicase HrpA n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1G8_9PLAN Length = 1334 Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 573/1319 (43%), Positives = 811/1319 (61%), Gaps = 55/1319 (4%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVK---KVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + L + + M D+ RFS+RL ++ K K P + Q + +E++++ + R Sbjct: 23 ALSELPKLISQAMAGDQFRFSQRLRSIRQAQKSKKPFDKN--LQRLREELEKSLARRDER 80 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 P+IT+ +LP+ Q+ I + I ++QVVIV GETGSGK+TQLPK+ + +GRGI G+ Sbjct: 81 LKRCPKITFDQSLPIHQELATIQKTIEENQVVIVCGETGSGKSTQLPKLLLSMGRGISGI 140 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRR+AAR+VA RI+EEL E G G+K+RF+D + NT +KLMTDGILLAE Q Sbjct: 141 IGHTQPRRIAARSVAARISEELGREQGTACGFKIRFTDTTNPNTYIKLMTDGILLAETQT 200 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN- 243 D L QYDTIIIDEAHERSLNIDFLLG+LK LLP+R DL++IITSATID ERFS HF Sbjct: 201 DSFLNQYDTIIIDEAHERSLNIDFLLGFLKRLLPKRRDLRVIITSATIDAERFSEHFAGS 260 Query: 244 ---APIIEVSGRTYPVEVRYRPIVEE-------------ADDTERDQLQAIFDAVDELSQ 287 API+ VSGRTYPVE+RYRP +E + ++ RD+ + DAV+EL+ Sbjct: 261 EGPAPILNVSGRTYPVEIRYRPFDDEPAGKEAGKETGNKSQNSSRDEQSQLADAVNELAA 320 Query: 288 ESHGDILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQSHSG 341 GDILIF++ E +IR+TA L ++ R TEI+PLY RLS +EQN+VF+ S Sbjct: 321 IDDGDILIFVATEWDIRETAKLLRGRSIIGDDGGRQTEIVPLYGRLSTAEQNKVFRPSSY 380 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 RRIV+ATNVAE+S+TVPGI+YVID G ARISRYS R++VQRLPIE +SQASANQR GRCG Sbjct: 381 RRIVIATNVAESSITVPGIRYVIDTGLARISRYSSRSQVQRLPIEAVSQASANQRAGRCG 440 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 RV+ GICIRLYSE D+ SR EFT PEILRTNLASVILQ + LG I FPF++ P Sbjct: 441 RVAPGICIRLYSEADYKSRDEFTSPEILRTNLASVILQTLNMRLGAIEEFPFIDPPKPTA 500 Query: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 I+DG L ELGAI DEQ +LT +GR++S+LPVDPR+ARM+L A C+ E +II Sbjct: 501 IRDGYSTLFELGAI--DEQN---RLTDIGRKISRLPVDPRIARMILAAHDENCLHEILII 555 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 +AL +QDPRERP++KQQA+DE H +F D +SDFL+F+ LW++ + ++ S + RR C Sbjct: 556 AAALELQDPRERPIEKQQAADEAHEQFRDPDSDFLSFLKLWDFYHKLKEEQSHSKLRRAC 615 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADK 641 ++L+Y R+REW DI+ QLRQ+V+E GI + + IH ALL GLLS+I M+ +D Sbjct: 616 VQNFLSYNRLREWADIFRQLRQLVEESGIKPHPRKDDSAAIHRALLPGLLSNIAMR-SDS 674 Query: 642 QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 EYTGA ++ ++PGSG+F+K PKW++ AEL+ETS+ + R A+I P W+EP A HL+K Sbjct: 675 HEYTGAGQQKYFLWPGSGIFEKKPKWIISAELIETSKRYARTVAKISPNWIEPAAPHLVK 734 Query: 702 RTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQT 761 +++S+P W + +A EKVT++GL IV R V+Y +IDP R L +++ LVEGD Sbjct: 735 KSWSDPRWNGEAASAVAAEKVTLFGLTIVPRRSVHYGKIDPEHSRTLLLQYGLVEGDINI 794 Query: 762 RHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVS 821 F N K ++E+ + +SRR D++ E F +YDQRI DV WWK S Sbjct: 795 NVDFLAHNQKFIEDLEQQQARSRRYDLIPSQEQQFAYYDQRIPEDVYDGVSLKKWWKVAS 854 Query: 822 RETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLP 881 +TP LLN +E+I + ++P+ + G ++ L Y EPGA+ DGVTV IP Sbjct: 855 LKTPTLLNMRLEDFFDTQSEEIDEGEFPDAINMGKMQFPLEYHLEPGAEEDGVTVSIPQE 914 Query: 882 LLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLD 941 LNQ+ W +PGL E V A+IK+LPK VRR VPAP A+ + +++ + + Sbjct: 915 SLNQLSPQRLGWLVPGLLEEKVAAMIKALPKAVRRMLVPAPETAKQVVSKLEFGKGSFEE 974 Query: 942 SLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQ 1001 ++ L +++G + + + ++P HL++ RV+D + R+L L+ K Sbjct: 975 TVAEMLSQISGERITADQFEIQRLPQHLQMNIRVLDQGGDAIAVNRNLTQLRQEYGSKAA 1034 Query: 1002 ETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLE 1061 + +A++DD QSGL W+FG P + + + +P+LVDE+ SVA+ L D P Sbjct: 1035 SSFTALSDDHWSQSGLTDWTFGDFPAEVQIQHDQLSLTGFPSLVDEQTSVALCLRDAPER 1094 Query: 1062 QKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG------KVLELIDDCISC 1115 GLRRL +L+ +K E LP+ ++ LY G +++EL+ + Sbjct: 1095 AAYETRFGLRRLFILSEHKRLKAQVEHLPDLNRISLYATAIGGINLREQLVELLAERTLF 1154 Query: 1116 GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 G + + N A + ++ E + + A+ + +L +F ++K +D Sbjct: 1155 GKKEQLPRN----------EAQYRQLVKEWRNQIPVAAQDLASLLPGLFEQYHKMKVTLD 1204 Query: 1176 MTMALG----LSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL-AVDPHRD 1230 T L D++AQ+ ++ F+ + L RYLQ +E RL KL +D Sbjct: 1205 KTKVPAWSEPLHDMRAQLNAMINNRFLVSTPYPWLQQFSRYLQGMEMRLSKLGGTGLKKD 1264 Query: 1231 RAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDK 1289 A + + + + Q + D + + RWM+EELRVS FAQ+LGT +S K Sbjct: 1265 IANIRSISRYFELYSQRARQHHEREIVDPQLIKFRWMLEELRVSLFAQKLGTALKVSPK 1323 >UniRef50_C1RH11 ATP-dependent helicase HrpA (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RH11_9CELL Length = 1120 Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/953 (55%), Positives = 667/953 (69%), Gaps = 97/953 (10%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P I YP+ LPVS ++Q+I +AIRDHQVV+VAGETGSGKTTQLPKI +ELGRG G IGHT Sbjct: 137 PAIVYPEQLPVSARRQEIADAIRDHQVVVVAGETGSGKTTQLPKIALELGRGRAGQIGHT 196 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AARTVA RIA+EL GG +GY+VRF+D SD+T+VK+MTDGILLA+IQ+D +L Sbjct: 197 QPRRIAARTVAERIADELGVPLGGVVGYQVRFTDESSDSTLVKVMTDGILLAQIQRDPML 256 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 243 YDT+IIDEAHERSLNIDF+LGYL LLP+RPDLK++ITSATID +RF+RHF + Sbjct: 257 RMYDTLIIDEAHERSLNIDFILGYLTRLLPQRPDLKLVITSATIDSDRFARHFGSPATAA 316 Query: 244 ------APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFM 297 AP++EVSGRTYPVE+RY+P+ + D +RD + I +AVDEL GD+L+F+ Sbjct: 317 AEDRTPAPVVEVSGRTYPVEIRYQPLSPD-DGPDRDLVTGITEAVDELMAAGPGDVLVFL 375 Query: 298 SGEREIRDTADALNK------LNLRH---TEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 SGEREIRD DAL + RH EI+PLYARLS +EQ RVF++H+ RR++LAT Sbjct: 376 SGEREIRDAEDALRGSLGPRVTDPRHPDGVEIVPLYARLSAAEQRRVFEAHTTRRVILAT 435 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 NVAETSLTVPG++YV+DPGTARISRYS TKVQRLPIEP+SQASANQR GR GRV+ GI Sbjct: 436 NVAETSLTVPGVRYVVDPGTARISRYSKATKVQRLPIEPVSQASANQRSGRSGRVAPGIA 495 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEAPDKRNIQD 464 IRLYSE+DF SRPE+T+PEILRT+LASVILQM A+G+ ++ FPFV+ PD R ++D Sbjct: 496 IRLYSEEDFESRPEYTEPEILRTSLASVILQMIAVGVVTSPDEVVDFPFVDPPDVRAVRD 555 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 GV LL EL A+ Q +LT GR L+QLP+DPRLARMV+EA + G RE ++I +A Sbjct: 556 GVALLTELHALEV--QGGRTRLTETGRALAQLPIDPRLARMVVEAGRRGVAREVLVIAAA 613 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LSIQDPRERP + ++ +D HRRF D SD L ++NLW YL ++Q+ LS +AFRRLC+ + Sbjct: 614 LSIQDPRERPAESRETADALHRRFADPSSDLLTYLNLWTYLRDRQRELSGSAFRRLCKAE 673 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE----------------------- 621 +L++LRVREWQD+ TQLRQ+ K+LG P + Sbjct: 674 HLHFLRVREWQDVVTQLRQMAKDLGFEAKGAPTPASDEVPAAAGHGRDGRRDGGRHTPTG 733 Query: 622 -------------------------IHIALLTGLLSHIGMK------------------- 637 IH ALL GLLS IGM+ Sbjct: 734 APTQDAGSVERPDALQTRWTWDGDAIHRALLPGLLSQIGMQVVTDVAAGAPAKGRDGKPR 793 Query: 638 ---DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 + EY GAR ARF+IFPGSGL ++PP WVM AELVETSRLW R A++DP WVE Sbjct: 794 RPDSRARNEYLGARGARFAIFPGSGLSRRPPSWVMAAELVETSRLWARDVAKVDPAWVEE 853 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 A HL+KRTY++P W QGA M EKV +YG+P+VA R+V ++IDP RELF+RHAL Sbjct: 854 AAAHLVKRTYADPAWSTRQGAAMVNEKVLLYGVPVVAQRRVLLARIDPEHARELFVRHAL 913 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 V+G+W T H FF EN +L AE E L ++RRRD++VDD+ LF+FYD R+ +V+SARHFD Sbjct: 914 VQGEWTTHHTFFHENRRLLAEAEALAARARRRDLVVDDDALFDFYDARVPPEVVSARHFD 973 Query: 815 SWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV 874 WWK R PDLL+F + +L+ + A +I + +P+ W QG L L+YQFEPG +ADGV Sbjct: 974 RWWKDARRADPDLLSFTRELLVGDDAAEIDEGAFPSRWPQGELSFPLTYQFEPGTEADGV 1033 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA 927 TVH+P+ L +V GF+W +PG+R EL+ A I++LPKPVR VPAP+ A A Sbjct: 1034 TVHVPISQLPRVRPEGFDWMVPGMRAELLTATIRALPKPVRVQLVPAPDVARA 1086 >UniRef50_D1BTV1 ATP-dependent helicase HrpA n=4 Tax=Bacteria RepID=D1BTV1_XYLCX Length = 1624 Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/1089 (50%), Positives = 692/1089 (63%), Gaps = 177/1089 (16%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P ITYP+ LPVS +++DI AIR++QVV+VAGETGSGKTTQLPKI ++LGRG G IGHT Sbjct: 77 PPITYPEQLPVSARREDIATAIRENQVVVVAGETGSGKTTQLPKILLDLGRGRAGQIGHT 136 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AAR+VA RIAEEL+T G +GY+VRF+D S+ T+VK+MTDGILLA+IQ+D L Sbjct: 137 QPRRIAARSVAERIAEELRTTLGEIVGYQVRFTDQSSEQTLVKVMTDGILLAQIQRDPEL 196 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN------ 242 + YDTI+IDEAHERSLNIDFLLGYL LLPRRPDLK+IITSATID +RF+ HF+ Sbjct: 197 LAYDTIVIDEAHERSLNIDFLLGYLSRLLPRRPDLKVIITSATIDSQRFAEHFSPSHLAA 256 Query: 243 --------------NAPIIEVSGRTYPVEVRYRPIVEEADDT-------ERDQLQAIFDA 281 AP++EVSGRTYPVE+RYRP+V E + ERD + I +A Sbjct: 257 LGGAPEAVVDVLPKAAPVVEVSGRTYPVEIRYRPLVPEVSENGLQKKGEERDLVTGIIEA 316 Query: 282 VDELSQESHGDILIFMSGEREIRDTADAL-NKLNLR--------HTEILPLYARLSNSEQ 332 DEL + GDIL+F+SGEREIRD D L L R H EILPLY+RLS +EQ Sbjct: 317 CDELMRCGPGDILVFLSGEREIRDALDGLEGHLGARARDPRHPQHVEILPLYSRLSAAEQ 376 Query: 333 NRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 +RVF +H GRRIVL+TNVAETSLTVPGI YV+D G ARISRYS TKVQRLPIE ISQAS Sbjct: 377 HRVFAAHPGRRIVLSTNVAETSLTVPGIHYVVDTGLARISRYSKATKVQRLPIEAISQAS 436 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDI 448 ANQR GR GRV++G+ +RLYS+ DF +RPE+T+PEILRT+LASV+LQM A+G+ ++ Sbjct: 437 ANQRSGRSGRVADGVAVRLYSQADFEARPEYTEPEILRTSLASVLLQMIAVGVVESPDEM 496 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL------------------- 489 A FPFVE PD R ++DGV LL ELGA+ T + + + P+ Sbjct: 497 ARFPFVEKPDTRAVRDGVMLLRELGALETVVEPTPAVVEPVETTPSPVVEPPSPVVEPVE 556 Query: 490 ----------------------------------GRQLSQLPVDPRLARMVLEAQKHGCV 515 GRQL+QLP+DPRLARM++E + G Sbjct: 557 TTPPPSDVVSTGSTTGGRTSTTGAGRTTTRLTTVGRQLAQLPMDPRLARMIIEGARRGAA 616 Query: 516 REAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN 575 RE +I +ALS+QDPRERP + ++ +D+ H RF D SDFL+++NLW YL +QQ+ LS + Sbjct: 617 REVAVIAAALSVQDPRERPAEVRERADQLHARFADPTSDFLSYLNLWEYLRDQQRDLSGS 676 Query: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI----------PVNSEP--------- 616 AFRRLC+ ++LNYLRVREWQD+ QLRQ+ ELGI PV + P Sbjct: 677 AFRRLCKAEHLNYLRVREWQDVVAQLRQMANELGINLSSRASVVEPVETTPRVDGGVVST 736 Query: 617 ---------------AEYRE------IHIALLTGLLSHIGMKDAD--------------- 640 E+R IH ALL GLLS +GM+D Sbjct: 737 GSTTAEGADDGQPRSGEWRRVWDGDTIHRALLAGLLSQVGMQDTGEIKASSVAHLKGEAR 796 Query: 641 -----------KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDP 689 + EY GAR ARF+IFPGS L KKPP WVM ELVETSRLW R ARI P Sbjct: 797 ARALRQQAKRVRNEYLGARGARFAIFPGSPLSKKPPAWVMAGELVETSRLWARDVARIQP 856 Query: 690 EWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELF 749 EW E +A L +RTYS+PHW QGA MATEKV +YG+PIV+ R V ++++DP RE+F Sbjct: 857 EWAEELAGDLARRTYSDPHWSTKQGAAMATEKVLLYGVPIVSDRPVLFARVDPEAAREMF 916 Query: 750 IRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVIS 809 IRHALV+G+W T H FF EN +L E E++E +SR+R ++ ++ LF FYD+R+ V+S Sbjct: 917 IRHALVQGEWTTHHTFFAENRRLLEEAEQVEARSRQRGLVASEDDLFAFYDERVPASVVS 976 Query: 810 ARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA 869 ARHFD WW + RETPDLL F L+ + + +P+ W QG L L L+YQF PG+ Sbjct: 977 ARHFDQWWSRARRETPDLLTFRLEDLVD--VDAVDPSQFPSSWTQGELTLPLTYQFRPGS 1034 Query: 870 DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL 929 DADGVTVH+PL +L ++ SGF+W +PGL EL +A I+SLPK VR VPAP+ A Sbjct: 1035 DADGVTVHVPLSVLPRLSPSGFDWMVPGLLEELCVATIRSLPKAVRVQLVPAPDVGNAVA 1094 Query: 930 G-------------RVKPLELPLLDSLERELRRMTGVTVDREDWHWDQV---PDHLKITF 973 G R + P + R +R + V V + W ++V P HL++TF Sbjct: 1095 GWLRQNTPTWEDMARAGDMAEPFHVAFTRAVRALRDVVVPGDAWDTERVERLPAHLRMTF 1154 Query: 974 RVVDDKNKK 982 RVV+ K Sbjct: 1155 RVVESGVKS 1163 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 90/308 (29%), Positives = 135/308 (43%), Gaps = 25/308 (8%) Query: 1013 EQSGLHIWSFG----QLPESYEQK-RGNYKVKAWPALVDE-----RDSVAIKLFDNPLEQ 1062 E+ GL W G +LP+ G V+ +PALV+E +VA+++ + LEQ Sbjct: 1312 ERLGLATWPDGLPDGRLPDVVSTDLGGGVVVRGYPALVEEPGPKQEPTVALRILADALEQ 1371 Query: 1063 KQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC--------IS 1114 G+RRLLL + + L L +PY L +D S Sbjct: 1372 PATHARGVRRLLLAENRLTAGRVTSRWSGTQALTLAASPYRNTNLLAEDLQLATVMALTS 1431 Query: 1115 CGVDKLIDANGGP----VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL 1170 D GP + E + A VR L D +A V LTA + + Sbjct: 1432 PAADLAPGTPAGPHAVQIRDAESYNAAKAHVRTHLEDETYRVAGHVVAALTAWRTLESEV 1491 Query: 1171 KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRD 1230 + + + L DI+ L++ GFV+ +RL +RYL+A RLEK PHRD Sbjct: 1492 RKTSSLALLNTLQDIREHAATLIHDGFVSATPPRRLPHLVRYLRAASYRLEKAQASPHRD 1551 Query: 1231 RAQMLKVENVQQ---AWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 ++ +V++ + P ++ E+RW+IEELRVS FAQQLGT +S Sbjct: 1552 AELAWRIHDVEEAYAKARAAYAAGPADAARAAELAEVRWLIEELRVSLFAQQLGTDGTVS 1611 Query: 1288 DKRILQAM 1295 +KRI + + Sbjct: 1612 EKRIRKTL 1619 >UniRef50_A0Z814 Helicase, ATP-dependent n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z814_9GAMM Length = 1246 Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 557/1228 (45%), Positives = 793/1228 (64%), Gaps = 21/1228 (1%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 I +PD LPV +++++I EAI HQVVI+AGETGSGKTTQ+PKIC+ELGRG + IGHTQP Sbjct: 17 IKFPDELPVCERREEIREAISQHQVVIIAGETGSGKTTQIPKICLELGRGQEARIGHTQP 76 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAAR VA RIA+EL++E GG +GYKVRF+D V+ +T +KLMTDGILLAE+Q+DR L Sbjct: 77 RRLAARRVAERIADELESELGGLVGYKVRFNDSVAPSTAIKLMTDGILLAELQRDRELRD 136 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDT+IIDEAHERSLNIDF+LGYL+ LLP+RPDLK+IITSATID +RFS+HF+NAP+IEVS Sbjct: 137 YDTLIIDEAHERSLNIDFILGYLRALLPKRPDLKVIITSATIDVDRFSQHFDNAPVIEVS 196 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL 310 GR +PVEV Y + A+D DQ+ D + GD+LIF+ GEREIRD + L Sbjct: 197 GRLFPVEVLYLGDSDGAEDGVEDQIVRAVDGIVAEDFGPRGDVLIFLPGEREIRDLSRRL 256 Query: 311 NKLNLRHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLATNVAETSLTVPGIKYVIDPGTA 369 R +ILPLYARLS +EQNRVF+ + SG R+VLATNVAETSLTVPGI+YVIDPGTA Sbjct: 257 KGDERR--QILPLYARLSAAEQNRVFKPTGSGMRVVLATNVAETSLTVPGIRYVIDPGTA 314 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 R+SRYS+RT++QRLP+E ISQ+SA+QRKGRCGRV+ G+C+RLYSE DFL+RP+FTDPEIL Sbjct: 315 RVSRYSHRTRLQRLPVERISQSSADQRKGRCGRVAAGVCLRLYSEQDFLARPQFTDPEIL 374 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 RTNLA+V+L+M LGLGD+ FPFV+ P+ + ++DG RLLEELGAI+ + KLT L Sbjct: 375 RTNLAAVVLKMLELGLGDVQKFPFVDPPEGKMVRDGQRLLEELGAIS-----ARGKLTSL 429 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GR++++LPVDP+LARMV A + C+ E +++ SAL++QDPR+RP +K+ +D+ H RF+ Sbjct: 430 GRKMARLPVDPKLARMVHAAGELKCLEEVLVVVSALAVQDPRDRPAEKRAQADQAHARFN 489 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL----RQVV 605 SDFL+++NLWNY EQ+++LS N FR+LC+ ++L+++R+REW+++++QL RQV Sbjct: 490 HPRSDFLSWLNLWNYYEEQRQSLSQNQFRKLCQREFLSFMRLREWREVHSQLVIACRQVQ 549 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 G +N E ++ +H ALL+GLL + D + ++Y RN IFPGS L KKPP Sbjct: 550 LRPGAALNDE-TDFEGVHKALLSGLLGQVAQLD-EGRKYNATRNRSVQIFPGSVLHKKPP 607 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVY 725 KW++ AE+VETS+++ R A IDP+W+ + ++KR + EP W+ G VMA E+VT+Y Sbjct: 608 KWLVAAEVVETSQVYARQCAAIDPKWLLRINPQILKRHHYEPAWQMRSGRVMAIERVTLY 667 Query: 726 GLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRR 785 GL I +++++ +++ RE+FIR LV GD++ AF + NL EV++LE ++RR Sbjct: 668 GLTISDGQRIHFGEVNSVAAREIFIRDGLVLGDYRKPPAFLKANLHSIKEVQDLESRTRR 727 Query: 786 RDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISK 845 RD+LVD++ LF+FYD+RI +SA + W K+++ + L+ + +L ++ E I+ Sbjct: 728 RDLLVDEQALFDFYDERIPAQCVSASSLEKWVKQLADDKQLRLD-QSQILTRDPGEAIAD 786 Query: 846 LDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIA 905 +P+ RL Y+FEPG + DG++V +PLPLLN+ FEW +PGL RE IA Sbjct: 787 -QFPSELEWREATYRLKYRFEPGKENDGISVTVPLPLLNRAPRYRFEWLVPGLLREKCIA 845 Query: 906 LIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQV 965 L+K LPK R+ VP P+ +A L ++ ++ L +L LRR GV + EDW + Sbjct: 846 LVKGLPKACRKQLVPVPDVVDAALASMQADDVALCSALSAALRRTRGVAIADEDWDIAGL 905 Query: 966 PDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQL 1025 + + RVVD++ K L +GR + L + + + Q + WSFG L Sbjct: 906 AELYRANIRVVDERGKLLAQGRDMAALVAQFRNGADVERLSEPSNSPAQHQVKSWSFGDL 965 Query: 1026 PESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYL 1085 P + KV+ +PALVD D +A++L D + + G+ L + +KYL Sbjct: 966 PNIWRTTAAGMKVERFPALVDHGDRIAVELHDYQPDAELLHRRGVAALAMSCSSQTVKYL 1025 Query: 1086 HEKL--PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRA 1143 ++L NKA L L + + + L+ + I + ++ D E F ++ Sbjct: 1026 RKQLFADNKASLALAGSGLDRSV-LVRETIMASLLEIWDETLPR--DEAAFTRGLNAIKG 1082 Query: 1144 ELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGF 1203 + T + + + L + K LK +DI Q+ L+ GF+ N Sbjct: 1083 QWVSTALAKEQVMINFLLPLAEAQKHLKQLTKTEFTAARADISGQIQCLLEPGFMVMNPG 1142 Query: 1204 KRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKE 1263 L RY +A+ R+++L +D+ + +E + P + Sbjct: 1143 YWLEQYPRYGKALLHRIQRLNGQTEKDQKSLRLLEPSLTRLSEAAANYPGLSGLSPPALQ 1202 Query: 1264 IRWMIEELRVSYFAQQLGTPYPISDKRI 1291 RWM+EE RVS FAQQLGT P+S KR+ Sbjct: 1203 YRWMLEEFRVSLFAQQLGTRLPVSSKRL 1230 >UniRef50_C7RBD8 ATP-dependent helicase HrpA n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBD8_KANKD Length = 1311 Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 564/1242 (45%), Positives = 789/1242 (63%), Gaps = 49/1242 (3%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 +I + LPV Q + D+ +AI ++QVV++AGETGSGKTTQLPKIC++LG G+ G IGHTQ Sbjct: 87 DIEFDMALPVCQARDDVRKAIEENQVVVIAGETGSGKTTQLPKICLQLGLGVYGKIGHTQ 146 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AA +VA RIAEELK+E G +GY +RF+D S T V++MTDGILL EI D LL Sbjct: 147 PRRVAATSVARRIAEELKSELGELVGYSIRFNDQSSAVTPVRVMTDGILLNEITHDPLLR 206 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----NNAP 245 QYDTIIIDEAHERSLNIDFLLGY++ +LP+RPDLK+IITSATID ERFS+HF AP Sbjct: 207 QYDTIIIDEAHERSLNIDFLLGYIRNILPKRPDLKVIITSATIDVERFSKHFAIDGKPAP 266 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTER--DQLQAIFDAVDELSQESHGDILIFMSGEREI 303 I+E+SGRTYPV+V YRP DD E Q++ I A+DEL + GDILIF+SGE EI Sbjct: 267 ILEISGRTYPVDVWYRP-----DDEENPSPQVERIGHALDELMSFAPGDILIFLSGEAEI 321 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKY 362 R+TA L K E+LPLYARLS EQ ++F G RRI+L+TNVAETS+TVPGI++ Sbjct: 322 RETAKFLRKERFEGCEVLPLYARLSMREQEKIFHPSGGKRRIILSTNVAETSVTVPGIRF 381 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 VIDPG ARISRYS R K+QRLPIE ISQASANQRKGRCGRV++G+CIRLY E+DFL+RPE Sbjct: 382 VIDPGFARISRYSVRNKIQRLPIEKISQASANQRKGRCGRVADGVCIRLYEEEDFLNRPE 441 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 FTD EILRTNLA+VILQM LGLGDI AFPF++ P + I DG+ LL EL A+ +Q Sbjct: 442 FTDAEILRTNLAAVILQMKQLGLGDIEAFPFIDEPAAKQISDGLNLLSELQAVDGKKQ-- 499 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 LT +GR++++LP++PRLAR++L A+ C+REA+I+ + LS++DPRE P +K++ + Sbjct: 500 ---LTNIGRKMARLPIEPRLARILLAAEDESCIREALILAAFLSVKDPREWPFEKRELAQ 556 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 +KH ++ +SDF+A +NLW++L +QQ+ LS+NAFRR C+ + +N+ REW+ + QL+ Sbjct: 557 QKHAKYKHPQSDFIAIINLWDHLHKQQEDLSNNAFRRYCQEELVNFNAYREWRSTFRQLK 616 Query: 603 QVVKEL-------GIPVN-SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 +VK P+N + Y ++H LLTGLLS IG KD +K Y G R RF I Sbjct: 617 SLVKSAHHQTQKQSEPINPDDKVYYAKLHSILLTGLLSFIGQKDIEKG-YLGTRQTRFMI 675 Query: 655 FPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 P S FKK P WVM E+VET++ + R+ A I+ W+E + +HLIK Y + HWE+ +G Sbjct: 676 HPQSANFKKQPPWVMAFEIVETTQNYARLTAMIETPWIETIGKHLIKSHYFDAHWEKKRG 735 Query: 715 AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA 774 AV+A+ + T+ GL IV+ R V+YS I+P LCRELFI H LV + + RH+F ++N +L Sbjct: 736 AVVASLQQTLLGLKIVSNRTVDYSSIEPELCRELFILHGLVRRELEPRHSFQQDNEQLWL 795 Query: 775 EVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSM 834 +VE+ K+R+ D+ D+ L ++D+R+ + + + + W KK +++ LL K + Sbjct: 796 DVEQEIAKARQADMRTDERDLIAWFDKRLPESICNVKQLNQWLKKNAKQNNQLLTLNKDV 855 Query: 835 LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQ 894 L K AE+ YP +++L LSY FEPG DGVTV IP L Q ++S FE Sbjct: 856 LFK--AEEQDASLYPETIQVKSIELPLSYHFEPGHPQDGVTVKIPQSLSQQFKDSDFERL 913 Query: 895 IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVT 954 +PGL E + +++SLPK R+NFVP P +++A +V + L+D + + L +MTGV Sbjct: 914 VPGLLEEKIEFMLRSLPKRFRKNFVPIPQFSQACYEQVLEQQGSLIDIISKHLFKMTGVI 973 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 + +E W +P+H + F +V DK K L GR+L+ ++ K + S + E+ Sbjct: 974 LPKEAWQELSLPEHYLMRFEIVGDKGKILTSGRTLEQSQEL---KQVKVKSKSSHKKKEE 1030 Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 + H W + E ++ G K+ AL D D V I N + + G+ RLL Sbjct: 1031 TFTH-WPASFIKEGMFEEAGT-KIPVTYALEDGGDKVRILAVVNKRQAENVHVRGVCRLL 1088 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 L + YL +K NK KL L + V E+IDD + L+ N + + F Sbjct: 1089 ALEKSQLLSYLKKKYHNKQKLTLSVSTLASVDEIIDDAAMASLKDLVQTNIP--YDKTSF 1146 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 A L +K+ EL ++ + Q+L I + KG + T+A DI Q L Sbjct: 1147 AELSKKMEKELVPATTELLDDLVQVLQLRSRILAQAKG-LGKTLASTRKDIGNQCDYLFQ 1205 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPA 1254 GF G ++ D RYL AIEKR+E+ ++P ++ ++ + + W++ + + Sbjct: 1206 PGFCFRFGADKIKDFKRYLSAIEKRIERAKLNPLKEAESLIVISD-------WVD-VRES 1257 Query: 1255 RREDE-----DVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +D+ +V E WM+EE R+S FAQ T +PIS KR+ Sbjct: 1258 LAQDQAIPTFEVDEFNWMLEEFRISLFAQGQKTRFPISAKRL 1299 >UniRef50_Q0VPC9 ATP-dependent helicase HrpA n=2 Tax=Alcanivorax RepID=Q0VPC9_ALCBS Length = 1316 Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 592/1336 (44%), Positives = 821/1336 (61%), Gaps = 82/1336 (6%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 T +L ++LD + DR R +RL G+ ++ ++A I + R A+ Sbjct: 4 TLKSLYEQLDKVRRADRFRLKKRLDGLARLPAKKRNDKAVDKVATAIASSVAGREQRLAS 63 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P + +PD LPV + +I +AI DHQVV++AGETGSGKTTQLPKIC+ELGRGI+G IGH Sbjct: 64 VPALEWPD-LPVVASRDEIKQAINDHQVVVIAGETGSGKTTQLPKICLELGRGIEGTIGH 122 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAAR VA+R+AEEL + G +G+KVRFS+ V +++++K++TDG+LL EIQQDR Sbjct: 123 TQPRRLAARAVASRVAEELHSPLGSTVGFKVRFSEQVGEHSLIKVLTDGMLLNEIQQDRF 182 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L QYDT+IIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID +RF+ HF AP++ Sbjct: 183 LNQYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDHQRFAEHFGGAPVL 242 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE--SHG-----DILIFMSGE 300 EVSGRT+PVE+RYRP E + + + I D + E+ +E S G D+L+F++GE Sbjct: 243 EVSGRTFPVEMRYRPPAEGQELSRQ-----IEDVLLEIQREERSEGLPMARDVLVFLAGE 297 Query: 301 REIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 R+IRD L + +LR EILPLYARLS +EQ+R+F +H GRR+VL+TNVAETSL Sbjct: 298 RDIRDVHHHLKRCATHGSSLRDMEILPLYARLSQAEQHRIFSAHRGRRVVLSTNVAETSL 357 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI+YVID GTARISRYS +KVQRLP+EP+SQASANQR GR GRV GIC RLY ED Sbjct: 358 TVPGIRYVIDAGTARISRYSVHSKVQRLPVEPVSQASANQRAGRSGRVMPGICFRLYDED 417 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DFL+RP FTDPEI RTNL +VILQM+ L LG + FPF+E PD R ++DG RLL+ELGA+ Sbjct: 418 DFLNRPAFTDPEIQRTNLGAVILQMSDLRLGKVEDFPFIEPPDGRLVRDGYRLLDELGAL 477 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 T + LT LGRQL++ P+DP L RM++ A + +REA+I+ SAL+ QDPRERP Sbjct: 478 TEKQ-----TLTALGRQLARFPLDPTLGRMLVAAAEKNVLREALIVVSALATQDPRERPH 532 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 DKQQ +D+ H+ F +KESDFL FV LW + Q++ALS N + +L + +L+ R+REW+ Sbjct: 533 DKQQQADQAHQPFTEKESDFLFFVKLWQWADAQREALSRNQYEKLLKKTFLSPTRMREWR 592 Query: 596 DIYTQLRQVVKELGIPVN---------SEPAE--------------YREIHIALLTGLLS 632 D + QL + KE G +N +EP Y +H ALLTGLL+ Sbjct: 593 DTHRQLLLLAKEQGWTLNAPIDSGLSLTEPDNANNKSAAKASPSPLYAPLHKALLTGLLA 652 Query: 633 HIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 ++ M+ ++ E+ RN + ++PGS L + +W+M AE VETSRL+ R A+IDP WV Sbjct: 653 NV-MQRTEEGEWLSTRNRKPLVWPGSALSRTKARWLMAAEQVETSRLFARTVAKIDPLWV 711 Query: 693 EPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRH 752 E A HL+KR Y EPHW + +G MA E+V ++GL + + R VNY I P REL IR Sbjct: 712 EEAAGHLLKRHYFEPHWSKKRGCAMAKEQVNLFGLILASGRGVNYGPIQPVESRELMIRE 771 Query: 753 ALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARH 812 LV G F + N + +E++EHK RRRDILVD+E FYD R+ D+ + Sbjct: 772 GLVMGHLHREPPFVKANRERFETLEDMEHKLRRRDILVDEEARVAFYDARLPGDIHTVAG 831 Query: 813 FDSWW-KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADA 871 +W+ K+ + E + L + L+ + + +P+ L+L L Y F+P + Sbjct: 832 LMNWYNKRATAEQKEALFMDDGFLLSRSPD-LGNDQFPDQLKLDGLRLPLEYSFDPTGER 890 Query: 872 DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGR 931 DGVT+ +PL LNQ+ ES +W +PGL RE + ALI++LPK RR+FVP P+Y A + Sbjct: 891 DGVTLIVPLAALNQISESRLDWLVPGLLREKLEALIRALPKARRRHFVPVPDYVSALMET 950 Query: 932 VKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVD--DKNKK-LKEGRS 988 + P E PLL ++ REL+RM+G+ +++E+W + DHL++ +VVD D ++K L +GR+ Sbjct: 951 LSPDE-PLLPAMTRELQRMSGLRIEQEEWQTANLADHLRMFIQVVDRVDGHRKVLAQGRN 1009 Query: 989 LQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDER 1048 L ++KD L V L + G W FG +PES EQ G V+ +PALVD Sbjct: 1010 LGEVKDRLVS-VTRDLPKPKQETPAVRG-QEWLFGDIPESQEQDLGGMTVRRFPALVDTG 1067 Query: 1049 DSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLEL 1108 + V ++ D+ + A G RLL + ++ L ++ A G + Sbjct: 1068 NDVELQFLDDEADAAWAHRWGTARLLGFKLTVQLRDLRKQAAQMAGFQKLKTEKGVMARQ 1127 Query: 1109 IDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE------LNDTVVDI---AKQVEQI 1159 D V E F LHE VR+E LND D A+Q I Sbjct: 1128 ALDHALLRV------------LAEHF-QLHEPVRSEAAFRDRLNDHRGDFVPWAQQQLSI 1174 Query: 1160 LTAVFNINKRLKGRVDMTMALGLS----DIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQA 1215 + +F ++L G+++ L + DIK Q+ L + ++ L + R L A Sbjct: 1175 MGKLFAHYRQLMGKLEKNFPLAWAHAHRDIKQQLACLFPDDVLLQMPWEWLQEYPRLLAA 1234 Query: 1216 IEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSY 1275 I+ RLEKL +DR ++E + + + P ++ E +++ WM++E RVS Sbjct: 1235 IDHRLEKLGGQIGKDRTLSAELEAYSKQHETRAAGV-PLWKQSEPLQQYFWMLQEYRVSL 1293 Query: 1276 FAQQLGTPYPISDKRI 1291 FAQQLGT +S KR+ Sbjct: 1294 FAQQLGTKLSVSAKRL 1309 >UniRef50_A4SYB1 ATP-dependent helicase HrpA n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYB1_POLSQ Length = 1330 Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/1317 (44%), Positives = 807/1317 (61%), Gaps = 100/1317 (7%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG-IKG--LIG 126 EI +P+ LPVS ++Q I +A++ HQVVIV GETGSGKTTQLPKIC++LGRG I G LIG Sbjct: 11 EIRFPEELPVSGQRQIIKDALQSHQVVIVCGETGSGKTTQLPKICLDLGRGTINGGKLIG 70 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AA A RIA+EL + G +GY+VRF+D S + +KLMTDGILLAE Q+D Sbjct: 71 HTQPRRIAATATAKRIAQELGSPIGQDVGYQVRFADKTSHSASIKLMTDGILLAETQRDP 130 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----N 242 L YDT+IIDEAHERSLNIDFLLGYL++LLP+RPDLK+IITSATID +RF+ HF Sbjct: 131 QLRAYDTLIIDEAHERSLNIDFLLGYLRQLLPKRPDLKLIITSATIDAQRFAEHFAINGK 190 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE----------SHGD 292 AP+IEVSGR +PVE RY P+ +A + +A + D +++E GD Sbjct: 191 VAPVIEVSGRLFPVEQRYSPLEPDAKPDGKKASKAAKEISDAVTEEIASLWREGAAGSGD 250 Query: 293 ILIFMSGEREIRDTADALNK---LNLR-HTEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 +L+F+ GEREIRD A+AL K L R H EIL L+AR S +EQ RVF +GRRI+L T Sbjct: 251 VLVFLPGEREIRDCAEALRKDHVLQQRFHPEILSLFARQSVAEQERVFSPGNGRRIILTT 310 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 NVAETSLTVP I+YVID G AR+ RYSYR KV++L IE ISQA+ANQR GRCGRVS+GIC Sbjct: 311 NVAETSLTVPNIRYVIDSGLARVKRYSYRNKVEQLQIESISQAAANQRAGRCGRVSDGIC 370 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 +RLYSE D+ SR +FTDPEILR++LASV+L+M++L L I FPF++ P R I DGV+L Sbjct: 371 VRLYSELDYQSRSQFTDPEILRSSLASVLLRMSSLRLPKIQHFPFIDKPLGRAIADGVQL 430 Query: 469 LEELGAITTDEQASA--------YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 L+ELGAI DE A +KLT +G+QL+ LP+DP + RM+L A++ ++E I Sbjct: 431 LDELGAIEFDESEPADGKDINNSFKLTAIGKQLADLPLDPCIGRMLLAAKEQNALKEVTI 490 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRR 579 I SAL+ QDPR+RPMD+ A+D+ H +F D+ S+FL+FV LWN Y Q S+ Sbjct: 491 IASALATQDPRDRPMDQATAADQAHLQFADERSEFLSFVKLWNWYQDALQHKHSNRQLET 550 Query: 580 LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA 639 LC++ +L+ R+REW+DI+ QL ++ E G N A Y ++H++LLTGLL ++ K+ Sbjct: 551 LCKSKFLSPRRLREWRDIHGQLHTMLGEKGWKENGLAATYEQVHLSLLTGLLGYVAKKEE 610 Query: 640 DKQE---------YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPE 690 D++ Y GAR R I+PGS + KK W++ EL ET+R++ R A+I+P+ Sbjct: 611 DEKSQDRNSKTGGYVGARGIRPFIWPGSTIGKKAGAWILAGELQETNRMYARTIAKIEPQ 670 Query: 691 WVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI 750 WVE VA H + ++ S+P W+ QG VMA E+ T+YGLPI R+V Y +P RELFI Sbjct: 671 WVERVAAHRLIKSLSDPFWDNRQGEVMAFERGTLYGLPIYHGRRVRYEPHNPDETRELFI 730 Query: 751 RHALV-----------------EGDWQTRHA----FFRENLKLRAEVEELEHKSRRRDIL 789 R ALV E D + ++ FF N +L E+E LEH+SRR D+L Sbjct: 731 RQALVQEEMFGRMDTPALQRETETDAKKKYPNLFNFFWHNRRLIKEIEALEHRSRRPDVL 790 Query: 790 VDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYP 849 VDD+ LF FYD RI +V S +W+ K E L EK+ L++ A I+ YP Sbjct: 791 VDDDLLFAFYDSRIPKEVRSRESLKAWFSK-DPELDSQLRLEKADLMRHEAAGITVDRYP 849 Query: 850 NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKS 909 G +L L+Y FEPG+ DGVT+ +PL LNQV+ EW +PG+ E V L+KS Sbjct: 850 KNMLVGGAQLSLTYHFEPGSPKDGVTLVVPLTQLNQVDGRRCEWLVPGMCEEKVHLLLKS 909 Query: 910 LPKPVRRNFVPAPNYAEAFLGRVKPLELP------LLDSLERELRRMTGVTVDREDWHWD 963 LP+ +RR+ VP P+YA++FL R LE LDSL ++R+ G+ + R D+ + Sbjct: 910 LPQKLRRHCVPLPDYAKSFLER--KLEEKQFGVGDFLDSLISDIRKERGLEIKRTDFRPE 967 Query: 964 QVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDG------------ 1011 +P H + FR++D+ ++L+ R+L L+ + A+A + Sbjct: 968 SLPLHSSMNFRLIDEHGRQLEVERNLSRLRSEYGETARSAFQAIAQETAQVELGVEPTQK 1027 Query: 1012 -------------IEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDN 1058 +EQ G W FG+LPE+ E ++GN + +PALVD D +++FD+ Sbjct: 1028 AGSNSSNEANARKVEQGGYRAWEFGELPETLEIQKGNKTLFGYPALVDRIDYCDLEVFDD 1087 Query: 1059 PLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVD 1118 LE ++ GLRRL L+ +K L ++LP +LGL F G V LID ++ ++ Sbjct: 1088 LLEARKQHALGLRRLFALSNKDTLKALQKQLPGIRELGLLFINVGSVEGLIDHILNLALE 1147 Query: 1119 KLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTM 1178 + PV E+ F + + L +I++ L A ++ K++ Sbjct: 1148 RAFMGESLPVNAEQ-FTERLQAGKPRLALIAQEISRHALNALQAHADLQKKIA-SAKAAS 1205 Query: 1179 ALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVE 1238 +DI+AQM GL++ FV + +L RYL+AI R++KL +P RD E Sbjct: 1206 PSAYADIQAQMQGLIFPKFVADIPYAQLVHVPRYLKAIAMRIDKLRSNPSRDAQCQKDWE 1265 Query: 1239 NVQQAWQQWI--NKLPP--ARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +V + WQ+ + NK A ED+ + + RW +EELRV+ +AQ+L TP P+S KR+ Sbjct: 1266 SVARPWQKLMQGNKGAASYAMTEDQALTDFRWQLEELRVALYAQELKTPTPMSLKRL 1322 >UniRef50_A9GK92 ATP-dependent helicase HrpA n=2 Tax=Myxococcales RepID=A9GK92_SORC5 Length = 1263 Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/1279 (43%), Positives = 773/1279 (60%), Gaps = 39/1279 (3%) Query: 40 PDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA 99 P + QE G+ A+ + +P+ LP+S + +DI AI HQVVIVA Sbjct: 6 PTVSHRVPQEQPPAPPSPGGRTSSPPASGGPVRFPEELPISARVRDIARAIEAHQVVIVA 65 Query: 100 GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVR 159 GETGSGKTTQLPKIC+ +GRG+ IG TQPRR+AA +VA R+A+EL E G +GYK+R Sbjct: 66 GETGSGKTTQLPKICLAMGRGLSARIGVTQPRRIAATSVAARVAKELGVELGKEVGYKIR 125 Query: 160 FSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR 219 FSD S T VK MTDGI+LAEIQ D L YDT+IIDEAHERSLNIDFLLGYLK LLP+ Sbjct: 126 FSDRTSPATYVKYMTDGIVLAEIQGDPRLSGYDTLIIDEAHERSLNIDFLLGYLKRLLPK 185 Query: 220 RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIF 279 RPDL++I++SAT++ +RF+ +F AP+IEVSGRTYPVEV +R Sbjct: 186 RPDLRVIVSSATLETDRFAAYFGGAPVIEVSGRTYPVEVIHR---RPESGEAEVADAVAA 242 Query: 280 DAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH 339 + S + GDIL+F+ GEREI DT L + L HT +LPLY RL S+Q RVFQS Sbjct: 243 TVEEITSIDPRGDILVFLPGEREIHDTMAELTRHGLPHTTLLPLYGRLPQSDQQRVFQSL 302 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 GRRIVLATNVAETSLT+PGI YVID G AR++RYS RT V +L IEPIS+ASA+QRKGR Sbjct: 303 PGRRIVLATNVAETSLTIPGIVYVIDSGLARVNRYSPRTGVTQLQIEPISRASADQRKGR 362 Query: 400 CGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459 GRV G+C RLY E D +RP +TDPEILR L+ VILQM ALGLG I FPF++AP K Sbjct: 363 AGRVQSGVCFRLYDEQDDRARPAYTDPEILRVGLSGVILQMKALGLGAIEDFPFLDAPSK 422 Query: 460 RNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAM 519 R + +G R+LEELGA+ A +LT +GR+L++LP+DPRL RMVL + G + E + Sbjct: 423 RAVDEGYRVLEELGALD-----DAGELTDIGRKLARLPLDPRLGRMVLGGESEGALAEVL 477 Query: 520 IITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR 579 II +AL +QDPRERP+ Q+ +D+ HR+F D+ SDF+ + LW++ + Q L+ N R+ Sbjct: 478 IIAAALGVQDPRERPLAAQKQADDAHRKFKDEASDFVGLLKLWSFYQDAQGRLTQNQLRK 537 Query: 580 LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA 639 CR +++YLR+REW D++ Q+ ++ KE+G N PA+ IH ALL GLLS IGM + Sbjct: 538 ACRDHFVSYLRMREWADVHRQISRITKEMGFSPNDAPAKGDAIHRALLPGLLSRIGMWNQ 597 Query: 640 DKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 + + Y GAR RF + P SGL KKPP W+M AELVETS+L+ R+AA +DP W+E A L Sbjct: 598 ENKVYLGARQTRFQLHPSSGLAKKPPAWIMAAELVETSQLFARMAAALDPAWIEAAAGPL 657 Query: 700 IKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDW 759 KR++S+PHW AVMA E+VT+YGLPI R+V++ IDP R++F+ HALV ++ Sbjct: 658 CKRSHSDPHWAAKPAAVMAREQVTLYGLPIARDRRVDFGAIDPKSARQIFLVHALVRQEY 717 Query: 760 QTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK 819 TR F N +L EV L K+RR ++L D+ L F+D+R+ V S + F++W K+ Sbjct: 718 ATRAPFMEANRRLFEEVSRLRDKARRSEMLADEHALELFFDRRVPEGVYSGKTFEAWRKE 777 Query: 820 VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIP 879 E P L+ + ++ + A ++ +P+ + LSY+F+PG D DG+++ +P Sbjct: 778 AEAEDPRALHLSLADVLLDEAADLTPERFPDSLDLYGAAVPLSYRFDPGEDDDGISLSLP 837 Query: 880 LPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPL 939 L LL Q + EW IPG E + L++SLPK +R+ VP A ++P + PL Sbjct: 838 LVLLPQADPDELEWMIPGWHAEKIAQLLESLPKSLRKALVPLREVAREIAAELRPFQGPL 897 Query: 940 LDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGK 999 +L R + T V + + +P +L+ FRV+D+ + + EGR L++LK+ L G+ Sbjct: 898 RPALARAVEDRTAERVPADAFRPQDLPPYLRFYFRVLDEDGRVIGEGRELRELKERLSGR 957 Query: 1000 VQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP 1059 +E + V G+E+ GL +S LPE + G +KV +PAL+D SV++++ + Sbjct: 958 AREAWARVGKAGLERDGLTSFSVEALPERVQVDAGRHKVFGYPALIDGETSVSVRVLASR 1017 Query: 1060 LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNK---AKLGLYFNPYGK------VLELID 1110 +A GLRRLLLL + + L + L + + LG P L +D Sbjct: 1018 AAAAEATRAGLRRLLLLQLGGKMSQLEQPLRSAVAVSGLGAKVAPGEPGLARQIALRALD 1077 Query: 1111 DCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL 1170 + G D P T+ F A +K R L + +A +I + + L Sbjct: 1078 EAFQLG-----DPGAFP-RTKAAFQARLDKGRGSLQGVLGKLAGLAREIGVELDRVQAML 1131 Query: 1171 KGRVDMTMA--LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPH 1228 + A L D++ Q+ L+ G + RL RYL+A + RLE+L P Sbjct: 1132 RSMTGKPGAPRPALDDVRTQVDFLLPVGLFSRAPIDRLAHLPRYLRAAQIRLERLPNGPQ 1191 Query: 1229 RDRAQMLKVENVQQAWQQWI-------NKLPPARREDEDVKEIRWMIEELRVSYFAQQLG 1281 +D++ K V WQ ++ +K PA E+++ RW+IEELRVS FA +L Sbjct: 1192 KDQS---KAAQVLPFWQDYLKHQQGLRDKGVPA----EELESFRWLIEELRVSLFAPELK 1244 Query: 1282 TPYPISDKRILQAMEQISG 1300 P+S +R+ + +++ G Sbjct: 1245 AAVPVSPQRLTEQWKRLLG 1263 >UniRef50_A0L8U8 ATP-dependent helicase HrpA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8U8_MAGSM Length = 1305 Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/1287 (43%), Positives = 781/1287 (60%), Gaps = 27/1287 (2%) Query: 20 MLRDRLRFSRRL------HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY 73 M+R R R L H + P A + Q + D+ A R P + Y Sbjct: 21 MIRHRHGLRRALGALQQDHRQGRAIAPHALEKFRQRLTASCDEVAK----RRQQLPILRY 76 Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 P+ LP+S K++ I +AI HQ+++++GETGSGKTTQLPKIC+ELG G+ G IG TQPRR+ Sbjct: 77 PEQLPISSKREAIQQAIAQHQIIVLSGETGSGKTTQLPKICLELGLGVHGYIGVTQPRRI 136 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA +A +A +L T G +GYKVRF D V ++ +VK++TDG+LLAE QQDR L +Y+ Sbjct: 137 AASGIAQFLASDLGTPLGEKVGYKVRFHDQVGEHALVKVLTDGMLLAETQQDRFLSRYEA 196 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 IIIDEAHERSLNIDFLLG LK + RRPDLKIII+SAT+D ++F+ HFN+APII VSGRT Sbjct: 197 IIIDEAHERSLNIDFLLGLLKGITVRRPDLKIIISSATLDTDKFAAHFNHAPIISVSGRT 256 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADALNK 312 YPV VRY P+ E+ + +++A+ AV+EL ++ GD+LIF+ GEREI++ A+AL K Sbjct: 257 YPVAVRYNPLDEKNEPDSDQRMEALLFAVEELFEDLPDGDVLIFLPGEREIKEAAEALRK 316 Query: 313 LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 + H EI+PLYARLS EQ R+F S RRI+L+TNVAETSLTVP I VID G AR+S Sbjct: 317 HHPAHVEIVPLYARLSAKEQQRIFNPGSKRRIILSTNVAETSLTVPRIHGVIDTGLARMS 376 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 R+S RT+VQRLPIE ISQASANQRKGRCGR++ GICIRLYSEDDF RP +TDPE+LRT+ Sbjct: 377 RFSTRTQVQRLPIERISQASANQRKGRCGRLAAGICIRLYSEDDFNQRPLYTDPEVLRTS 436 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LA+VIL M AL LGD FPF++AP I++G+RLL+EL + +E LT +GRQ Sbjct: 437 LAAVILTMKALKLGDPHKFPFIDAPKPTAIREGIRLLKELDGLDDNE-----NLTDIGRQ 491 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 L+ LP+DPRLARM+L A++ C++E +I+ +ALS QDPRE P ++ + + H RF + Sbjct: 492 LAHLPLDPRLARMLLAAERFHCLQELLILAAALSTQDPREFPEAEKGGAKQHHARFSEPR 551 Query: 553 SDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 S+F+ + LW ++ E ++A S R + YL+ LRVREWQDI QL + VKELG+ Sbjct: 552 SEFIGRLRLWRHIEEMAEQARSKTQLRNALKKQYLSPLRVREWQDITHQLTRTVKELGLK 611 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVA 671 +N P +Y IH ALL GLL ++GMK +K +Y G R F IFPGS LF K PKWV+ A Sbjct: 612 LNEAPGDYAAIHKALLAGLLGNLGMK-GEKHQYDGVRGLSFHIFPGSELFGKSPKWVVAA 670 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVA 731 ELVETS+L+ R+ A+I+PEWVE VA HL+K+ +PHWE+ M E+VT++GL ++ Sbjct: 671 ELVETSKLYARLLAQIEPEWVEEVAPHLVKKHPFDPHWEKRAAQTMVYERVTLFGLTLIP 730 Query: 732 ARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVD 791 R V Y+ I PA R +FI + LV GD + F++ N L E E LEH++R R L D Sbjct: 731 KRSVPYAPIAPADARAMFIHNGLVAGDMHSNAPFYQHNRALIEEAEGLEHRTRERGYLAD 790 Query: 792 DETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNF 851 D+ LF+F+D + D+ + + D W + R+ P L + ++ ++ A + +P Sbjct: 791 DQALFDFFDGVLPPDINNLQALDQWRRSAERKNPKALFLPREVVFQQRA-NLDDAQFPGH 849 Query: 852 WHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLP 911 + +L L YQF PG DGVT IPLP+LNQ + F+W +PGL E ++ L K LP Sbjct: 850 ITLRDHELALIYQFNPGQGNDGVTTVIPLPVLNQFRTADFQWLVPGLLEEKIVGLFKILP 909 Query: 912 KPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKI 971 K RR+ VP P A+ ++ + L L R + G + + W W+ +P+HL++ Sbjct: 910 KRYRRHLVPLPQTAKWCAAQLPFNQGTLTALLARLIEPKVGEEIPPDAWQWENLPEHLQM 969 Query: 972 TFRVVDDKNKK-LKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE 1030 FR+VDD N+K L +GR L L++ ++ A+ E+SGL W+F LP Sbjct: 970 NFRIVDDSNRKVLAQGRDLALLQEHYAEDARDRFEALPKVSHEKSGLLNWNFDPLPLRMA 1029 Query: 1031 -QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWN-GLRRLLLLNIPSPIKYLHEK 1088 N + +PAL D+ SV I + + EQ Q M + GLRRLLLL + +K + + Sbjct: 1030 LMTERNRPITCYPALRDDGGSVGIAMAETQ-EQAQRMHHAGLRRLLLLQVHQQVKMVQKN 1088 Query: 1089 LPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG----PVWTEEGFAALHEKVRAE 1144 P + ++ + L+ + D++ N G V + F + + RA Sbjct: 1089 PPISNQALAHYTHLERKEVLVKSLLHAAADRVFFENQGVLPEQVRNQADFQKILAQGRAH 1148 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 L V + K +++ + LK + T DI+A + L+ +GF+ + Sbjct: 1149 LIPEVEAMGKLLDETFVQFGLLRNALKKPMYPTQQKVAMDIEAHLDKLLGQGFLRTTPPQ 1208 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 L RYL+A+ RLE+ + +D + + Q+ + + + K + Sbjct: 1209 WLSHLPRYLKAMLLRLERGRHNSGKDLERQAEYSVWQEKYDRLMEKYQHETHLPAALVLF 1268 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRI 1291 RW +EE RVS FAQ L T P+S KR+ Sbjct: 1269 RWALEEYRVSLFAQDLKTAIPVSHKRM 1295 >UniRef50_C1ZJL9 ATP-dependent helicase HrpA n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJL9_PLALI Length = 1305 Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/1296 (41%), Positives = 779/1296 (60%), Gaps = 25/1296 (1%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE--- 65 F AL++RL M DR S+ L ++ Q + + + D + R Sbjct: 13 FAALRKRLPEAMAADRSGLSKLLETTARMAQ--RGQPFDRNLHRFTDWLEKSITARNDRL 70 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 A RP I Y + LP+ Q++++ L+ + H V+IV GETGSGK+TQLPK C+E RGI GLI Sbjct: 71 ARRPAIHYDNELPIMQRREEFLKLLSQHSVIIVCGETGSGKSTQLPKFCLEAQRGIDGLI 130 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRR+AAR+VA R++EEL+ G +GYKVRF + V + +KLMTDGILLAEIQ D Sbjct: 131 GHTQPRRIAARSVAMRLSEELRAPLGQAVGYKVRFQEAVGAESYIKLMTDGILLAEIQSD 190 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF---- 241 L +YDTIIIDEAHERSLNIDFLLGYLK LL +R DLK+IITSATID ERFS+HF Sbjct: 191 PHLRRYDTIIIDEAHERSLNIDFLLGYLKRLLTQRKDLKVIITSATIDAERFSQHFEVDG 250 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEAD---DTERDQLQAIFDAVDELSQESHGDILIFMS 298 APIIE SGR+YPVE+ YRPI+ + D D + D QAI +AV E + + GDIL+F+ Sbjct: 251 KPAPIIEASGRSYPVEILYRPILSKGDAAEDNDIDMQQAIVEAVQEATSQGFGDILVFLP 310 Query: 299 GEREIRDTADAL--NKLNLRHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLATNVAETSL 355 EREI +TA L + H EILPLYARLS +EQ RVFQ S S RRI+LATNVAE+SL Sbjct: 311 TEREIHETAKILRGGERAASHREILPLYARLSAAEQQRVFQVSQSQRRIILATNVAESSL 370 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI+YVID GT R+SRYS R+K+QRLPIEP+SQASANQR GRCGRV GIC RLY E Sbjct: 371 TVPGIRYVIDTGTVRLSRYSPRSKIQRLPIEPVSQASANQRAGRCGRVGPGICYRLYDEA 430 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DF +R FT PEILRTNLA VIL+ +LGLG +++FPF++ P +I+DG R L ELGA+ Sbjct: 431 DFAARDPFTVPEILRTNLAQVILKTESLGLGSLSSFPFLDPPRTESIRDGYRTLFELGAV 490 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 D +LT LG++LS++P DPR+AR++ A + C+ E +II SAL QD RERP+ Sbjct: 491 DLDN-----RLTELGKKLSRIPTDPRIARVLFAADEQLCLAEMLIIASALETQDVRERPV 545 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 KQ A+DE H +F D+ SDF+ ++ +W++ E + LS + ++ C +YL+ R+REW Sbjct: 546 GKQDAADEAHAKFLDETSDFVTYLKIWDFYHELKAKLSHSQLKKACSQNYLSLTRLREWS 605 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 D++ +L ++V+ G+ + + IH A+L G ++I MK D EY A I+ Sbjct: 606 DLHRELSELVRAAGLKIRPRLQDTSAIHRAILAGFPTNIAMK-TDSGEYQMGGGALGVIW 664 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 PGSG+ K+ P+W++ AE VET+R + RIA +I+ EWVEP +HL+ RTY +PHW+ + Sbjct: 665 PGSGMAKQKPRWIVAAEFVETTRRFLRIAGKIESEWVEPYVEHLVNRTYHDPHWDARSRS 724 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 V+A EKV++ GLPIV RK + +++ A +E+FIR ALVEGD+ AF NL LR E Sbjct: 725 VVAYEKVSLQGLPIVNRRKTQFGRVNAAQAQEIFIRQALVEGDYPNPPAFLAHNLALRQE 784 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSML 835 +E+L+ + R+ ++ D ET +FY QR+ D+ D W + ++++PDLL + L Sbjct: 785 LEDLQARLRKTSLIADPETQAKFYAQRLPPDIYDGPRLDKWLRIATKDSPDLLKMTREDL 844 Query: 836 IKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQI 895 + + A++ + +P+ G+L+ + Y EPG DG+T+ +P Q+E W + Sbjct: 845 LAQEADEDWRERFPDQIRVGSLQAEVEYHLEPGTAQDGITIKVPQAAFRQLEWQRLGWLV 904 Query: 896 PGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTV 955 PGL E ++AL++ LPK R P P + L +K + L+D L +R G V Sbjct: 905 PGLLEEKIVALLRGLPKEYRVTLSPIPESVKQILPLLKMGQGSLVDQLAEIVRSRFGARV 964 Query: 956 DREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQS 1015 + ++P+HL++ R++D+ +++ R L +A G++ S + +E++ Sbjct: 965 LPAMFDESKLPNHLRMNIRLIDNSGEEVLSSREQTQL-EAHAGQL--IPSELISKSMERT 1021 Query: 1016 GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 GL W F + E ++ ++ +PA+VDE +V +KLFD + G+RRL + Sbjct: 1022 GLKTWDFATVHEKVIVRQNGLEIDGFPAIVDEGKTVGLKLFDTAIRALHEHKRGVRRLAV 1081 Query: 1076 LNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 L + + LP + L + L + I + + + E F Sbjct: 1082 LKLQKELSMQVTHLPEIKRWELAAKALPQPFPLKEHLIDLLAMRAVCEGKVLPRSPEQFQ 1141 Query: 1136 ALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYR 1195 + EL + V ++ + + I I RL R+ L D++ Q L+ Sbjct: 1142 LAIDAGFDELGNAVTEVMRLMSSIFQQTAEIRVRLD-RIPPVHDLTKRDLQRQYQWLLTP 1200 Query: 1196 GFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR 1255 GF++ + L RYL+AI R+++L + +DR +++ +E + Q N+ + Sbjct: 1201 GFLSQTPWFWLAQFPRYLKAILLRMDRLTGNAAKDRDRIMNLEPWIVRYAQRWNEHKRRK 1260 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 D +++ RWMIEE R+ F Q++ T P+SDKR+ Sbjct: 1261 YVDVELETFRWMIEEYRIHLFVQEMATAVPVSDKRL 1296 >UniRef50_B0TXK9 HrpA-like helicase n=2 Tax=Francisella philomiragia RepID=B0TXK9_FRAP2 Length = 1266 Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/1258 (42%), Positives = 790/1258 (62%), Gaps = 51/1258 (4%) Query: 55 DQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC 114 +Q + K+L P+ITYPD LPV++K DI + I D+QV++VAGETGSGK+TQLPKIC Sbjct: 46 EQTSQKIL------PKITYPD-LPVAEKVDDIKKLIEDNQVIVVAGETGSGKSTQLPKIC 98 Query: 115 MELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMT 174 ++LG G +GLIGHTQPRRLAAR++A+R+A E+ + + +K+RFSD S+NT++K+MT Sbjct: 99 LDLGLGKRGLIGHTQPRRLAARSIASRVATEIGDQSK--VSFKIRFSDQTSENTLIKVMT 156 Query: 175 DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDP 234 DG+LL+EI+ D+ L QY+ IIIDEAHERSLNIDFLLG +K++LP RPDLK+IITSATID Sbjct: 157 DGVLLSEIKNDKFLSQYEVIIIDEAHERSLNIDFLLGCIKKILPYRPDLKVIITSATIDH 216 Query: 235 ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQA-IFDAVDELSQESHGDI 293 ++F +F NA I +SGRTYPVE+RY + +D E LQ I A+DEL + GD+ Sbjct: 217 QKFIDYFQNAKDITISGRTYPVEIRY----QNDEDFEEFSLQERILYALDELGR---GDV 269 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH-SGRRIVLATNVAE 352 L+F+ ER+I +T LNK +LR TE+LPL++RLSN +QN++F S RR++LATNVAE Sbjct: 270 LVFLPTERDIHETLAYLNKQDLRFTEVLPLFSRLSNKDQNKIFNPEGSVRRVILATNVAE 329 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TSLTVP IKYVID G ARISRYSYRTKVQRLPIE ISQASANQR GRCGR+S G+CIRLY Sbjct: 330 TSLTVPRIKYVIDSGLARISRYSYRTKVQRLPIEKISQASANQRAGRCGRLSAGVCIRLY 389 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 SE+DF +R E+TDPEILRTNLASVILQM L LG I FPF+++PD R ++DG +LL EL Sbjct: 390 SEEDFNNRKEYTDPEILRTNLASVILQMLFLKLGSIQDFPFIDSPDSRFVKDGFKLLFEL 449 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 AI+ + S K+T G +++ +P+DP+LA++V+E + +RE + I S LS+QDPRE Sbjct: 450 QAIS-ELNYSKPKITDDGMKMAIMPLDPKLAKIVIEGHRQNTLREIVSIVSFLSVQDPRE 508 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP++ QQ +DEKH DK SDF+A +NL N L K+LS+ + + ++++ +R Sbjct: 509 RPLNFQQKADEKHAIDKDKSSDFIAILNLANRLNSDLKSLSNREKKEYFKKNFISPVRFN 568 Query: 593 EWQDIYTQLRQVVKELGIPVNS-EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 EW DIY Q+ +VV + ++S E Y +H A+ +G LS++G + + EY GAR + Sbjct: 569 EWNDIYRQIVEVVHQFKWKLSSNEKLNYENLHKAIASGFLSNVGF-NYENAEYLGARGLK 627 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 F IFPGS FK PKW++ +E+VET++ + R A+I+PEW+E +A+HLIK+ Y EP W + Sbjct: 628 FFIFPGSSQFKAKPKWLLSSEIVETTKTYARNVAKIEPEWLESLAEHLIKKHYDEPVWSK 687 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLK 771 + AV+ E+VT+YGL IV+ R V YS+I+P RE+FIR ALV GD+ ++ F+++NLK Sbjct: 688 KRRAVVVNERVTLYGLEIVSKRSVQYSKINPQEAREIFIREALVNGDFDSKAYFYQQNLK 747 Query: 772 LRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFE 831 L +VEELE+KSRR+DILVD+E +F YD I DV S FD W K V++E F+ Sbjct: 748 LINQVEELENKSRRKDILVDEEVMFAHYDSFIPDDVCSGATFDKWLKSVTKEQQKGFIFD 807 Query: 832 KSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGF 891 L++ A++I++ +P+ ++ L L Y F+P + DG TV +P+ +N + + Sbjct: 808 IESLMQHDAKEITQQKFPDVLTIADMHLPLEYHFDPLDERDGATVTVPIVFINDINPTVL 867 Query: 892 EWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV---KPLELPLLDSLERELR 948 EW + G + ++AL+++LPK +R+N VP P YA+A + K PL + + + Sbjct: 868 EWGVYGFLYDKIVALLRALPKNIRKNCVPVPTYAQAIFESIDFDKDRHSPLKSIIAKHIT 927 Query: 949 RMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA 1008 R+ G VD W +++ HL + +VVD++ K L G+ + LK LK L A Sbjct: 928 RIVGFVVDETVWQDEELEKHLVLNVKVVDEQGKTLAVGKDIHILKQKLKN-----LVAKP 982 Query: 1009 DDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWN 1068 ++++ + W F + + + K VK + L + +D V + E K M Sbjct: 983 KQEVDETVYYDWDFADIVMTSQIKEYCITVKVYNCLEEYKDGVKLSYKATFDEAKLCMQK 1042 Query: 1069 GLRRLLLLNIPSPI-KYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP 1127 L+RL+ L + + + K + + L K+ + D+ + +D N Sbjct: 1043 SLKRLIKLRLQNQLSKNIKSNDLTSLSMSL------KLSDSKDNVVDKAMDLSFFDNIEL 1096 Query: 1128 VWTEEGFAALHE--KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVD-----MTMAL 1180 +T+ F + + LN T +VE +L + +L+ +++ + Sbjct: 1097 PYTKADFEKFYAFGMQKFALNKT------KVEALLLEITKFKSQLEKKLNVKKIPLNFIE 1150 Query: 1181 GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENV 1240 +D++ ++ L +++ + L YLQA+E RLEK ++ RDR ++V + Sbjct: 1151 LFTDVRNELTELFTDDYIS-QPVEFLQRYKYYLQALENRLEKAKLNLQRDRGYQVEVNEL 1209 Query: 1241 QQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + + I + E ++ + +I+EL VS++ Q + T +S K+IL + +I Sbjct: 1210 RSKLAKKITANHIGKSELIGIR-VSNLIQELWVSWYLQSVKTIESVSYKKILAYINEI 1266 >UniRef50_A5EVC9 ATP-dependent helicase HrpA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVC9_DICNV Length = 1302 Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/1263 (43%), Positives = 767/1263 (60%), Gaps = 63/1263 (4%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R+ P + ++LPV +K+ I E I HQVVI++GETGSGKTTQLP+IC+ELG G G Sbjct: 58 RQENLPRPHFQNDLPVLAQKERIKELIAQHQVVIISGETGSGKTTQLPQICLELGLGAGG 117 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 I HTQPRR+AAR+VA RIAEEL G +GY+VRF + S +T++KLMTDG+LLAE Sbjct: 118 QIAHTQPRRIAARSVAARIAEELSVPLGAAVGYQVRFDEQCSPDTVIKLMTDGLLLAETL 177 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L QY+ IIIDEAHERSLNIDFLLGYL LL +R DLK+IITSATID E+F+RHF+ Sbjct: 178 TDPYLYQYEVIIIDEAHERSLNIDFLLGYLHRLLEKRRDLKLIITSATIDAEKFARHFHQ 237 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREI 303 AP I VSGRTYPVE+RYR ++D +E I A+DEL E GDIL+F+ ER+I Sbjct: 238 APQINVSGRTYPVEIRYREPPADSDLSEE-----ILAAIDELDCEQRGDILVFLPTERDI 292 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 R+TA L++ L T+ILPL+ RLS ++Q VF+ + RRIVLATNVAETSLTVP IKYV Sbjct: 293 RETATFLSRAQLPATDILPLFGRLSLADQQAVFRPKNQRRIVLATNVAETSLTVPRIKYV 352 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 ID GTAR+SRYS RTK QRLPIE ISQASANQR GRCGR+S G+CIRLYSE+DF +RPEF Sbjct: 353 IDTGTARMSRYSLRTKTQRLPIEAISQASANQRAGRCGRLSAGVCIRLYSEEDFQNRPEF 412 Query: 424 TDPEILRTNLASVILQMTALGLG----DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 T+PEILRTNLA+VILQM L L DIA FPFV+ P+ R I DG RLL EL A+ Sbjct: 413 TEPEILRTNLAAVILQMLLLNLAQNGDDIARFPFVDPPEMRQINDGYRLLFELKAVDNHN 472 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 +LT LGR++++LP+DPR AR+V A++H C+ E +I+ +ALSIQDPRERP DK+Q Sbjct: 473 -----RLTDLGRKIARLPIDPRFARIVFAAEEHACLHETLIVLAALSIQDPRERPFDKEQ 527 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +D +HR F DK SDF +NL+ +Q++ LS+N R C++ +LN R++EW+ + Sbjct: 528 HADMRHREFADKTSDFQTLLNLFAVYQKQRRQLSNNKLRAWCKSYFLNAARMQEWRALVN 587 Query: 600 QLRQVVKELGIPVNS-------------------EPAEYREIHIALLTGLLSHIGMKDAD 640 QL + V + + +N E +H +LL G L +G+ D Sbjct: 588 QLLRDVHQQKLTINDYRPRPVISNETGEKGGLALENPNLMGLHRSLLAGFLDQVGLWDEQ 647 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 +EY G R +FS+FP S L K P+ VM A ++E +R++ R+ A I+ +E +A HL Sbjct: 648 NKEYAGPRQRKFSLFPASVLAKARPQAVMAAHIMELNRVYARMCAPIELHELEQLAAHLT 707 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 K S PHW + G V+A E V +YGLPIVA RK + D E+FIR ALV G+ Sbjct: 708 KTQLSAPHWSKRAGNVLAEETVLLYGLPIVAGRKKPLATQDRDSAHEIFIREALVSGEIN 767 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 TR N LRA++E LE K+R R I+VD+E + +FY QR+ V S + W KK Sbjct: 768 TRLTVIARNQALRAQLETLEDKTRSRGIVVDEEQVADFYLQRLPVTVYSTVTLEQWAKKY 827 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 DLL E +L++E A +SK DYP + L Y F+P DG+TV +PL Sbjct: 828 HEH--DLLMTEADLLMQEVA--VSKRDYPENLAIRGYQFPLKYVFDPTQSDDGITVLLPL 883 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 LN V + FE +P + +E + +++ LPK RR VP P++A+A R+ E PL+ Sbjct: 884 TALNAVCAADFERLVPAMLQEKIEMILRRLPKMWRRQMVPIPDFAQALYERIVETETPLI 943 Query: 941 DSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKV 1000 +L + M G+ + + + +++ DH ++ FR++D K + + EGR L+ L+ + Sbjct: 944 PALISGIDAMKGLKIPEDAFDQEKIDDHYRMNFRLLDAKKQVIAEGRDLEALQKQYAAEA 1003 Query: 1001 -----QETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKL 1055 + + S +A D I W + LP S E+ RG + +PAL E + ++L Sbjct: 1004 SLQFQKRSHSQLASDEIVTD----WLWENLP-SQEKMRGG--IIGYPALTLEDGQLYLRL 1056 Query: 1056 FDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISC 1115 D+P ++A G+R LL+ + S IKYLH+ LP K ++ L++ + L+DD IS Sbjct: 1057 HDDPERAERAHRVGVRFLLMQKLSSQIKYLHKNLPYKTQMSLHYRKISSDIYLLDDIISA 1116 Query: 1116 GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGR-- 1173 V+++ P T++ F+A + +L +A + +L IN+ L+ Sbjct: 1117 LVEQVCLTAALP-RTQKDFSAALLQGEKKLVAGGQQLAAVLVDLLAQYSRINEALRSTKP 1175 Query: 1174 VDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 VD +DI+ Q+ LV+ F+ L D RYL A+E RL+KLA DP +D AQ Sbjct: 1176 VDAK-----NDIERQLARLVFPSFIRLTERAYLNDIARYLHAVELRLQKLARDPQKD-AQ 1229 Query: 1234 MLKV-----ENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISD 1288 K+ E + QQ P + ++ +++EE R+ FAQ+LGT +S+ Sbjct: 1230 RQKIIAPWEEKLSAKMQQCAVTYPLTANTPKTLQRFFYLLEEFRIQVFAQELGTKEKVSE 1289 Query: 1289 KRI 1291 K++ Sbjct: 1290 KQL 1292 >UniRef50_C8N990 ATP-dependent helicase HrpA n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N990_9GAMM Length = 1310 Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/1274 (43%), Positives = 767/1274 (60%), Gaps = 61/1274 (4%) Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V +R AA P+ +LPV K DIL IR+HQVVI++GETGSGKTTQLP++C+ LG G Sbjct: 62 VEVRRAALPQPKLSADLPVLAAKNDILRLIREHQVVIISGETGSGKTTQLPQLCLALGLG 121 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 +G I HTQPRR+AAR+VA RIAEEL T G +GY+VRF + SD T++KLMTDG+LLA Sbjct: 122 ARGTIAHTQPRRIAARSVAARIAEELDTPLGDAVGYQVRFDEKTSDATVIKLMTDGMLLA 181 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E D L QY+ II+DEAHERSLNIDFLLGYL L RRPDLKIIITSATID E+F+ H Sbjct: 182 ETLSDPYLAQYEVIIVDEAHERSLNIDFLLGYLHRLAARRPDLKIIITSATIDAEKFAAH 241 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 F AP++ VSGRTYPVE+RYRP E+ D + AI AV EL Q DIL+F+ E Sbjct: 242 FGGAPVLNVSGRTYPVEIRYRPPGEDEDTAD-----AILRAVAELDQHGRNDILVFLPSE 296 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 R+IR+ AD L + LR T++LPL+ RLS ++Q VF+ + RRIVLATNVAETSLTVP I Sbjct: 297 RDIREAADRLRREQLRDTDVLPLFGRLSLADQQAVFRPQAPRRIVLATNVAETSLTVPRI 356 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 K VID GTARISRYS RTK QRLPIEPISQA+ANQR GRCGRVS GICIRLYSE+D+ R Sbjct: 357 KAVIDTGTARISRYSLRTKTQRLPIEPISQAAANQRAGRCGRVSSGICIRLYSEEDYAQR 416 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P +T+PEILRTNLA++ILQM L LGDIAAFPFV+APD+R I DG RLL EL A TDE Sbjct: 417 PAYTEPEILRTNLAAIILQMLVLKLGDIAAFPFVDAPDERQINDGYRLLYELQA--TDE- 473 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 A +LTPLGR +++LPVDPR AR+++ A+K GC+++A+I+ +ALSIQDPRERP ++ Sbjct: 474 --ARRLTPLGRHMARLPVDPRFARILVAAEKSGCLQDALILVAALSIQDPRERPFGQEAR 531 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +D+K F DK SD+ +NL+ ++++ S+N R+ C+ YLN R+REW+++ Q Sbjct: 532 ADQKQGEFADKSSDYQTLLNLFAAYQRERRSASNNRLRQWCKNYYLNPQRMREWRELVNQ 591 Query: 601 LRQVVKELGIPVNS--------------------EPAEYREIHIALLTGLLSHIGMKDAD 640 L + +E + ++S E + +H ALLTG L +G+ D Sbjct: 592 LLRDSREQKLHLDSAHPAAPKNDLPDGAKGWLALENPQIETLHRALLTGFLDQVGLWDEQ 651 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 ++Y R++RFS+FP S L KKPP+ VM A +VET R + R A I +E +A HLI Sbjct: 652 NRDYLRPRHSRFSLFPASVLAKKPPQAVMAASIVETQRTYARTCAPIQLAELEHLAAHLI 711 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 + YS PHW + G V+A++ T+YGLPIVA R V Y++ DPAL E+FI ALV G+ Sbjct: 712 RHQYSNPHWSKKAGNVLASQTTTLYGLPIVAGRNVPYARHDPALAHEIFIHDALVPGELN 771 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 TR +N L +EE EHK+R R IL D+ FY +R+ V S + W KK Sbjct: 772 TRLKVIAQNRALIETLEEREHKTRSRGILADESQQAAFYMERLPETVHSVVTLEQWAKKH 831 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 L E +L+ + E I + DYP KLRL Y F+PG ADG+TV+IPL Sbjct: 832 GEAA--LAMREADLLLSD--ETIDEADYPTSLTINGQKLRLEYHFDPGGAADGITVNIPL 887 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 P LN ++ FE +P + + AL+++LPK RR VP P +A+A R+ + PL Sbjct: 888 PALNALDARAFERLVPAMLPAKIEALLRALPKVWRRQLVPIPAFAQAVSERIAGDDAPLH 947 Query: 941 DSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK----DAL 996 ++ + + G + + + +++ DH ++ +R++D KN+ L E R L L+ D+ Sbjct: 948 TAIRAAVYAIKGTAIPEDAFDENKIDDHHRMNYRLLDAKNQPLAESRDLAALQAEYSDSA 1007 Query: 997 KGKV-QETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKL 1055 + + + S ADD + + W + +LP G + +PAL E ++L Sbjct: 1008 AAQFRRRSQSRHADD----APITDWQWDELPAQETLPNG---ITGYPALTLEDGKHYLRL 1060 Query: 1056 FDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISC 1115 D+P A + LL + + IKYL + LP ++ L++ G L DD I+ Sbjct: 1061 HDDPERAASAHHAAVHALLADKLQAKIKYLRKNLPGYTQMALHYRKIGSDSTLADDIIAR 1120 Query: 1116 GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 + + G P AAL R EL ++A ++ +IL A + ++L + Sbjct: 1121 LLAHVCLQGGVPRTRAAWEAALARGER-ELIPAASELATKLTRILAAYSDAKQQLH---N 1176 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 + SDI+A + L+Y F+ + + L R L A KR+EK +DP +D + Sbjct: 1177 LKQPAIKSDIEAHLARLIYPEFIRDSDSRDLDLIDRALAATLKRIEKARLDPLKDLQRQQ 1236 Query: 1236 KVENVQQAWQQWINK-------LPPARREDEDVKEI---RW-MIEELRVSYFAQQLGTPY 1284 ++ + + QQ + K P R + W + E R+ +AQ+LG+P Sbjct: 1237 ELASWEATLQQTLAKHGMTRASQTPPRGTPASTRAALLDYWRLTEAWRIQTYAQELGSPL 1296 Query: 1285 PISDKRILQAMEQI 1298 S KR+ +A E++ Sbjct: 1297 KASPKRLQEAAEKL 1310 >UniRef50_D0KXD2 ATP-dependent helicase HrpA n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXD2_HALNC Length = 1394 Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust. Identities = 569/1369 (41%), Positives = 795/1369 (58%), Gaps = 86/1369 (6%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQA-IFQEMAKEIDQAAGKVLLREAARPE 70 L+ L L L D+ SRRL G ++ + A E+ + +A + R +A Sbjct: 30 LRANLAELPLVDQPALSRRLAGAERALQQNRLDAGRLAELVTAFEASAALLTERRSAELN 89 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 I YP LPVS +++ I++ IR H VVIVAGETGSGKTTQLPK+ +ELG G+KG IGHTQP Sbjct: 90 IDYPAELPVSGQREAIMDLIRAHPVVIVAGETGSGKTTQLPKMLLELGFGVKGQIGHTQP 149 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR VA+R+AEEL G +GYKVRFSD ++ V +MTDGILLAEI D L++ Sbjct: 150 RRIAARNVASRLAEELGVTGAGVVGYKVRFSDQTRASSRVAVMTDGILLAEIHSDPDLLR 209 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------- 243 YD +IIDEAHERSLNIDFLLG ++ LL RRPD +++ITSATID RF+RHF Sbjct: 210 YDALIIDEAHERSLNIDFLLGIVRRLLDRRPDFRLVITSATIDTARFARHFAGTDASGEP 269 Query: 244 --APIIEVSGRTYPVEVRYRPIVEEADDT------ERDQLQAIFDAVDELSQESH----G 291 AP+I V+GR++PVE RYR + +D ERD A+ AVDEL E+ G Sbjct: 270 QPAPVITVAGRSFPVEYRYRSLTAPQNDNDTETEEERDLPAAVVAAVDELHAEAQTTGGG 329 Query: 292 DILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVA 351 DIL+F+ GEREIR+ A L + LRHTEILPL+ARLS +EQ R+F H+GRRIVL TNVA Sbjct: 330 DILVFLPGEREIRECAHRLGRHGLRHTEILPLFARLSAAEQQRIFAQHTGRRIVLTTNVA 389 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLTVPGI YVID G ARI+RYS R++VQ+L +E ISQASANQR GRCGR++ G+CIRL Sbjct: 390 ETSLTVPGILYVIDSGLARIARYSPRSRVQKLAVEAISQASANQRAGRCGRIAPGVCIRL 449 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 + E D+ RP FTDPEILRTNLASV+L+M L LG+ FPF+E PD R + RLL E Sbjct: 450 FDEADYAGRPAFTDPEILRTNLASVVLRMIELRLGEPEHFPFIEPPDSRQLAGARRLLFE 509 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE--AQKHGCVREAMIITSALSIQD 529 LGA+ DE+ ++TPLGRQL++LPVDP L RMVL ++ + +I+ + LSIQD Sbjct: 510 LGAL--DER---QRITPLGRQLARLPVDPTLGRMVLSNLSKADATSVDILIVVAFLSIQD 564 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 PRERP D QA+D+ + F +SDF + LW+ + + R + +L+Y Sbjct: 565 PRERPADHAQAADQAQQAFRLADSDFAGILALWDQWHTVVRHENQRKRRDWAKKHFLSYN 624 Query: 590 RVREWQDIYTQLRQVVKELG---------IPVNSEP------AEYREIHIALLTGLLSHI 634 R+ EW D++ QLR+ E+G +PV ++ A +H A+L GLL+ I Sbjct: 625 RLLEWHDLFGQLREQADEIGRVKLPDPLPLPVMTDGDEAPLRARLDALHQAMLPGLLAQI 684 Query: 635 GMKD----ADKQE-----------------YTGARNARFSIFPGSGLFKKPPKWVMVAEL 673 G++D DK Y GA N RF IFPGS L K PKW+M AE+ Sbjct: 685 GLRDEATRTDKNTPKDSRDQRGKKQRTPTIYIGANNRRFQIFPGSQLAKTQPKWLMSAEI 744 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAAR 733 VET+R++ R+ A I+P W+E +A HL R YSEP W++ G V A E V ++GLPIV R Sbjct: 745 VETTRVYARMNATINPRWIEDMAAHLTTREYSEPRWDQRGGRVAAFETVKLFGLPIVTKR 804 Query: 734 KVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDE 793 ++++ +IDP R +FIR ALVEG++ + F+R N L E+ E+E ++RR D+L+DD+ Sbjct: 805 RIDFGRIDPLGARAIFIRAALVEGEFDSGLKFWRHNQALIDEIREIEARNRRPDLLIDDQ 864 Query: 794 TLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWH 853 TLF+FY+ + +V A W K ++ + PD+L + L+ ++ +P+ Sbjct: 865 TLFDFYETHLPAEVYDAHTLVRWLKTITPKQPDVLCMTRDDLLAREPVELDPAGFPDRLS 924 Query: 854 QGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKP 913 G L L+Y F PG+ DGVT+ +PL L Q++ IPGLRRE + ALI+SLPK Sbjct: 925 MGAFSLPLAYHFAPGSADDGVTLRLPLAALKQIDADRASHLIPGLRREKIEALIRSLPKA 984 Query: 914 VRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITF 973 RR+FVPAP +A + RV L + +L RMTG + + + ++ HL++ F Sbjct: 985 DRRHFVPAPEFAASVNERVSVDRGGLPAQVAEQLARMTGHKITADAFDERRLEPHLRMRF 1044 Query: 974 RVVD----DKNKKLKEG-RSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPES 1028 ++D D +K++ + R L L+ + L +E+ L WSFG+LPES Sbjct: 1045 ALIDAKQTDPDKQIIDADRDLSALRARHAAAAERALVERTRHRLERDDLIDWSFGELPES 1104 Query: 1029 YEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK 1088 + ++ A+PAL+D+ D ++LFD P A +G+ RL+L+ + I++L + Sbjct: 1105 LTVEELGAELTAYPALIDQGDCAEVRLFDAPERAVLAHRSGVVRLMLIALGEQIRHLSQY 1164 Query: 1089 L-------PNKAKLGLYFN-----PYGKVLELIDDC------ISCGVDKLIDANGGPVWT 1130 L P + + + N +G L D I+ + KL + Sbjct: 1165 LKQERSLDPARLQYSQWSNTRPLPAFGLTLPQRRDAAFDQALIARSIAKLAVDALPFIRD 1224 Query: 1131 EEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMG 1190 E F A E+++ +L+DTV +A Q+ I + +LKGR+ ++ +I Q Sbjct: 1225 ESTFRARVERLKPQLDDTVRRLAAQIRTIFAQHQALRAKLKGRLPLSQIEAAREIAEQFD 1284 Query: 1191 GLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINK 1250 L Y G + L + RYL A EKRLEK+ P RDR ++ V I Sbjct: 1285 LLFYPGMIWNTPQTLLDNLPRYLTAAEKRLEKIDRHPERDRMLRVQFMPVCARVTDKITA 1344 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 P + ++ +EE RV+ FAQ+L K I QA++Q+S Sbjct: 1345 TAPTPEAFAALNQLHEQLEEWRVATFAQELARKGAPGAKEIEQAIKQLS 1393 >UniRef50_B7GWG2 ATP-dependent helicase HrpA n=17 Tax=Acinetobacter RepID=B7GWG2_ACIB3 Length = 1294 Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/1314 (41%), Positives = 793/1314 (60%), Gaps = 90/1314 (6%) Query: 19 LMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLP 78 +M RDR R +R ++K K + E+ K +Q+ KV R P+I +LP Sbjct: 20 VMARDRYRLNR----LRKDKKANTA-----EIEKLFEQSNAKVRQRFERLPKIKLNQDLP 70 Query: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138 V+Q ++EAI+ HQV+IVAGETGSGKTTQLP+I M GRG+ G+IGHTQPRRLAAR+V Sbjct: 71 VTQYTDRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARSV 130 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 + RIAEE+ + G IG+K+RF++ S +++V+LMTDGILLAE+ DR L +YDTIIIDE Sbjct: 131 SQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIIDE 190 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258 AHERSLNIDF++GYLK+LLP+RPDLK+I+TSAT+D RFS +FNNAPI EV GR+YPVEV Sbjct: 191 AHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVEV 250 Query: 259 RYRPIVE-------------EADDTERDQLQAI---FDAVDELSQESHGDILIFMSGERE 302 RYRPI E ++ R +QA+ F +E H DILIF S E+E Sbjct: 251 RYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQE 310 Query: 303 IRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLATNVAETSLTVPGIK 361 IR+ + L K RHTEILPLYARL+ SEQ ++F S GRRI++ATNVAET+LTVP I+ Sbjct: 311 IRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNIR 370 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVID G ARISRY+YR++VQRLPIE ISQA+ANQRKGRCGRV+ G+CIRLYSE+DFLSRP Sbjct: 371 YVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSRP 430 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 EFT+PEI RTNLASVILQM +LGLG++ F F+E PD R + DG +LL ELGA+ + Sbjct: 431 EFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN- 489 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 +LT +G+ ++++P+DPRLARM++ G ++E +++ SAL++QDPRERP DKQ + Sbjct: 490 ---ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQA 546 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKA-LSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 D+KH F + +SDFL ++ LW+ L + +A +S N R+ + +L++LR+REW+ + Q Sbjct: 547 DQKHALFKEADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQ 606 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L ++ + L + N +PA Y +H ALLTGLLS I K ++ + R + +FP S L Sbjct: 607 LVELAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTL 666 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 K WVM E+VETS+++ R A+IDPEW+ A+ L+K Y EPHW + G V A Sbjct: 667 HKTNTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYA 726 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +++++GL I R VN+ ++D E+F+R AL G+ T F + NL EVE +E Sbjct: 727 QISLFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVE 786 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 K RRRD++VD+ET+++FY +I ++ S R F+ W V + P L E L Sbjct: 787 DKLRRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLN-- 844 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 ++ + +P+ H G L+L +Y+F+P D DG TV IP+ L QV+E+ + W IPG R Sbjct: 845 DRPTTQQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRL 904 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL--PLLDSLERELRRMTGVTVDRE 958 +L+ AL+K+LPK RRN VP P+ A + + + L + L LR G + + Sbjct: 905 DLIEALLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALR---GEQITEK 961 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 D+ ++++ +L +V+D+K K + +GR L +LK + + + +Q G Sbjct: 962 DFSFERIDPYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVK-------QQKG-- 1012 Query: 1019 IWSFGQLPESY----EQKRGNYKVKAWPALVDERD----------SVAIKLFDNPLEQKQ 1064 F PE++ QK VK + ALV ++ V I+ F++ E + Sbjct: 1013 --EFKTFPENFTFEASQKVTGVVVKQYQALVPTKNFAELEAKDESGVVIQTFNDQAEAIK 1070 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 G+ RL+ + + ++ L +++ L L ++P G +L + + I Sbjct: 1071 QHREGIIRLVHMQLGDLVRQLKKQI--SKPLALAYSPLGDKAKLEQMLVYATLQMAITT- 1127 Query: 1125 GGPVWTEEGFAALHEKVRAEL-------NDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 P+ E F L E+V+ + + + DI Q +QI + ++ + GR Sbjct: 1128 -LPINAGE-FNQLLEQVKKQFLSYGQQALEQLSDIYIQWQQIRRQLLVLDPDVFGR---- 1181 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 + DI+ Q+ + FV + RYL+A+ RL++L + RD A + V Sbjct: 1182 ---SIDDIEDQLDLMSLGNFVYCQPVDLWQEYPRYLKALLLRLDRLPNNLQRDHAAIDDV 1238 Query: 1238 ENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 + W + K + D +KE+ M+EELR+S F+Q + T PIS R+ Sbjct: 1239 D----PWMDKVFKF----KNDPRIKELYLMLEELRISLFSQPMKTKMPISPTRL 1284 >UniRef50_C0VY42 HrpA family ATP-dependent helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY42_9ACTO Length = 1577 Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/987 (51%), Positives = 639/987 (64%), Gaps = 131/987 (13%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R + P I +P+NLPVS +K +I AI++HQVVIV+GETGSGKTTQLPKIC++LGRGI Sbjct: 34 RATSLPVIDFPENLPVSARKDEIANAIKNHQVVIVSGETGSGKTTQLPKICLQLGRGIAK 93 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGG--CIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 LIGHTQPRRLAAR VA RIAEEL + GG +GY+VRF+D VS T+VKLMTDGILLAE Sbjct: 94 LIGHTQPRRLAARAVATRIAEELNSTVGGEGIVGYQVRFTDQVSSATLVKLMTDGILLAE 153 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQ D LL +YDT+IIDEAHERSLNIDFLLG++K+LLP+RPDLK+IITSATID RF++HF Sbjct: 154 IQNDPLLNRYDTLIIDEAHERSLNIDFLLGFIKQLLPKRPDLKVIITSATIDSARFAQHF 213 Query: 242 -----NNAPIIEVSGRTYPVEVRYRPIVEE----ADDTERDQ------------------ 274 N AP+I VSGRTYPVEVRYRP+ AD E D+ Sbjct: 214 ADAHGNPAPVITVSGRTYPVEVRYRPLSPAEPPAADTAETDEESFKNLVLEDPDADLALN 273 Query: 275 ----------LQAIFDAVDELSQESHG-------DILIFMSGEREIRDTADAL------- 310 L AI A DEL E G DILIF+ GER+IRDT +AL Sbjct: 274 GYGYGQDIDYLSAICAATDELCAEPLGNAENPDRDILIFLPGERDIRDTTNALRDHLGTR 333 Query: 311 --------NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKY 362 K L E++PLY+RLS +EQ +F H RRIVLATNVAETSLTVPGIKY Sbjct: 334 FLKAGEASGKSPLDAIEVVPLYSRLSAAEQQLIFAPHPRRRIVLATNVAETSLTVPGIKY 393 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 VIDPG ARISRYS RTKVQRLPIEPISQASANQR GRCGRVS+G+ IRLYS+ DF +RP Sbjct: 394 VIDPGLARISRYSNRTKVQRLPIEPISQASANQRSGRCGRVSDGVAIRLYSQKDFQNRPR 453 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 FT+PEILRT+LASVILQM ALGLG + FPF++AP ++I+DGV LL E+GAIT +Q Sbjct: 454 FTEPEILRTSLASVILQMAALGLGLVEKFPFLDAPAPKSIKDGVALLAEIGAITVSKQE- 512 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 +LT +GR L++LP+DPRL RM+LEA K GC E ++I +ALS+QD RERP QQ +D Sbjct: 513 -LRLTKIGRDLAKLPIDPRLGRMLLEADKLGCSSEVLVIVAALSMQDVRERPEAYQQDAD 571 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL- 601 H RF D SDF+ ++NLW YL + LS++A RRLC+ ++L+YLR REW+D+ +QL Sbjct: 572 AAHARFLDPTSDFITYLNLWRYLRVCDRELSNSALRRLCKKEFLHYLRFREWEDVVSQLV 631 Query: 602 ------RQVVKELGIPVNSEPAEYRE--------------------------IHIALLTG 629 R ++ L +P S+ A R+ IH ALL G Sbjct: 632 DLAKPLRLSLEPLSLPAKSDLARARQMSGAQDGTVQAVLDFTEGTSSRNADSIHQALLVG 691 Query: 630 LLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDP 689 LLS++G + K +Y GAR +RF+++PGSGL +K WVM AELVETSRL+ R ARI P Sbjct: 692 LLSNLGAWNQQKSDYEGARGSRFTVWPGSGLARKHYDWVMAAELVETSRLFARTVARIKP 751 Query: 690 EWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKV-------------- 735 EWVE +A L+KR YSEP W ++GA + EK +YGL + A R+V Sbjct: 752 EWVERIAPDLVKRVYSEPFWAASRGAALVREKTMLYGLTLTADREVLLGGLPADIKLDRC 811 Query: 736 ----------------NYSQIDPA-LCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 + PA L R++FIRHALVE W+ +AF R+N +L + Sbjct: 812 ASAGFTIGARAGASADGLQGMTPAELARDMFIRHALVENQWRADYAFIRDNQRLLDSIRA 871 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 EH+ R ++ DD +F F+D+R+ V+SA HFD WW++ + LL+ E + Sbjct: 872 DEHRFRTGGVISDD-AIFAFFDERVPASVVSATHFDGWWRRQRNKRVLLLSREALL---P 927 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 G S D+P W QG +L L Y+F PG++ DGV+V IPL LL +V++ GF W +PG+ Sbjct: 928 GEFSSSAADFPAVWRQGEFELPLHYEFNPGSERDGVSVRIPLALLPRVQDQGFAWLVPGM 987 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYA 925 EL+ +I++LPK +R+ VPAP+ A Sbjct: 988 LEELLTGVIRALPKQLRQQLVPAPDVA 1014 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 114/474 (24%), Positives = 188/474 (39%), Gaps = 95/474 (20%) Query: 906 LIKSLPKPV--RRNFVPAPNYAEAFL-GRVKPLELP-LLDSLERELRRMTGVTVDREDWH 961 L SL KP + N V P AE + G +++P S + + + GV V E W Sbjct: 1106 LGTSLAKPAENQENSVVKP--AEPVIPGVSGSIDVPEFFASFTQAAKVLKGVDVPNELWD 1163 Query: 962 WDQVPDHLKITFRVVDDKNKKLKEGRSL--------QDLKDALKGKVQETLSAV--ADDG 1011 ++P HL+ TF VVD+K K+L + L Q + A++ ++ L++ A +G Sbjct: 1164 EIELPPHLRFTFVVVDEKGKELLASKELAWLQKELAQRSQTAVRSAMRSALTSALEATEG 1223 Query: 1012 I-------------------------------------------EQSGLHIW-SFGQ--- 1024 E +GL W + G Sbjct: 1224 TSSPKGRGKDRPRKKNLPGVTAPNVGTAANAPTPKNAAQTQLFKETTGLTDWPALGTADD 1283 Query: 1025 -LPESYEQKRG-NYKVKAWPAL-VDERDSVA------------IKLFDNPLEQKQAMWNG 1069 LP+ E V+A+PAL D +S A K++ E A G Sbjct: 1284 ALPKDIEATTAQGLMVRAFPALHTDTAESYANNKGTSLHFSAGTKIYATLHEADAAHQAG 1343 Query: 1070 LRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLID---ANGG 1126 L +L+L + + K L L +PY L+ + V+ L++ + Sbjct: 1344 LVQLVLAKTALTQTRITTRWSGKESLLLAASPYANTTALVAAAQTAAVNALLNDYAMHPA 1403 Query: 1127 PVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIK 1186 + + F L V+ L D V ++ K + L A ++ ++ +M + +K Sbjct: 1404 LIRSRSSFNELCAWVKPRLEDKVYELLKYLINALAASADLETTVRAHGTQSMLQVNAAVK 1463 Query: 1187 AQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA---------VDPHRDRAQMLKV 1237 A L+ GF T + R+++A E R++K A + RD A++ Sbjct: 1464 AHAQSLLNDGFFTQIPPLWIPHVARFIKADELRVKKAAQSAQALAKDANLQRDLAELEHT 1523 Query: 1238 ENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +QA L A R + ++E +W++EELRVSYFAQ+LGT +S KR+ Sbjct: 1524 LLQRQAG----TGLNDAARLTQ-LREAQWLLEELRVSYFAQELGTSQKVSAKRL 1572 >UniRef50_B6BTD8 ATP-dependent helicase HrpA n=2 Tax=Betaproteobacteria RepID=B6BTD8_9PROT Length = 1223 Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 499/1240 (40%), Positives = 773/1240 (62%), Gaps = 34/1240 (2%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++ + LP+ + + + I+++QV I+ GETGSGKTTQLPKIC+++GRG +IGHTQ Sbjct: 2 KLDFSSPLPILENIDQVAKIIKNNQVTIICGETGSGKTTQLPKICIKIGRGKNKIIGHTQ 61 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AAR+VA RIA+EL+T G +GYKVRF+D S +T +KLMTDG+LLAE Q D LL Sbjct: 62 PRRIAARSVATRIAQELETSIGNEVGYKVRFTDKTSSHTKIKLMTDGVLLAETQSDPLLK 121 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YDT+IIDEAHER+LNIDFL+G++K+LLP+RPDLKIIITSATID ++FS+HF+ AP +E+ Sbjct: 122 RYDTLIIDEAHERNLNIDFLIGFIKQLLPKRPDLKIIITSATIDADKFSKHFDGAPTLEI 181 Query: 250 SGRTYPVEVRYRPI--VEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTA 307 SGRT+PVE YRP+ +EE D + +++++ + E+ ++S GDIL+F+ GE++I D Sbjct: 182 SGRTFPVETLYRPMKNIEEEDVLSIE--ESVYEVIQEIGRKS-GDILVFLPGEKDIHDIR 238 Query: 308 DALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 LN++ E+LPL++RL +Q ++F + + +RI+LATN+AETSLTVP IK+VID G Sbjct: 239 RYLNEMLNHDYEVLPLFSRLPVPDQQKIFTTSTKKRIILATNIAETSLTVPNIKFVIDSG 298 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427 AR+ RY+ R ++++L IE ISQA+ANQR GRCGR++ G+C RLY EDDF +R E+TDPE Sbjct: 299 LARVVRYNPRLRIEQLLIEKISQAAANQRTGRCGRIAPGVCYRLYDEDDFKNRSEYTDPE 358 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 I+R++LASVIL+M +L LGD+ FPF++AP K+ IQDG LL EL A+ + +T Sbjct: 359 IMRSSLASVILRMASLNLGDVEVFPFIDAPFKKFIQDGYDLLFELHAVEKNR-----AIT 413 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRR 547 LGR ++Q+P+DP +R+++EA C+ E + I +A+S+ DP ERP DK + +++ Sbjct: 414 ELGRTMAQIPIDPVFSRIIIEASNQHCLSEIIPIIAAISVADPIERPFDKLEEAEKAQMN 473 Query: 548 FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 FHD S F++F LW L ++ ++ F C+ +L++ R+REWQ++Y QL Q+V+E Sbjct: 474 FHDPRSGFMSFYRLWLLLLDEVRSKKIKDFAVFCKKYFLSFTRMREWQEMYKQLMQIVEE 533 Query: 608 LGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK-KPPK 666 LG N++ + Y +IH +LL GLL +IG K+ + Y G ++ RF I G LF+ K K Sbjct: 534 LGYRFNNKESTYDQIHQSLLCGLLRNIGFKEVESNYYLGCKSLRFLI--GPKLFRNKKFK 591 Query: 667 WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYG 726 W+M AE+++T + + + A I+ +W+E A+HL++ YS P + + V AT+K++++G Sbjct: 592 WIMAAEIIDTGKFYAQCIAEINDQWIEKYAEHLLEAEYSNPRFNKKLNRVDATQKLSLFG 651 Query: 727 LPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRR 786 L IV R ++Y I+P L + +FIR +VE + + F++EN KL E+E+LEHKSRRR Sbjct: 652 LVIVPDRTIHYGPINPELSKSIFIRQGIVENQYISPGLFWKENQKLIREIEDLEHKSRRR 711 Query: 787 DILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKL 846 DIL++D+ LFEFYD++I+ +VI+A F+ W K V + P+ L K L++ A+ I++ Sbjct: 712 DILINDDVLFEFYDEKINENVINAAGFEHWRKGVEKNQPEHLYLTKEYLMQHSAKDITET 771 Query: 847 DYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIAL 906 YPN K +L Y FEP DG+T+ IPLP LN ++ S +W +PGL +E + Sbjct: 772 VYPNHITINQQKYQLKYHFEPNHPRDGLTIAIPLPNLNLIDSSELDWLVPGLLKEKITWS 831 Query: 907 IKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVD----REDWHW 962 K+LPK +RR +P ++ E F LE P S + R VD D ++ Sbjct: 832 FKNLPKDIRRKCIPVKDWLEKF------LEYPRQGSFKETFTRFIWKYVDPHFLMSDDYF 885 Query: 963 DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSF 1022 +P HLKI + V++D+ K + L LK K V+ + + + IEQ G+ W Sbjct: 886 AYIPSHLKIKYEVINDQGKMIDLNEDLDLLKKENKKNVEAVVERIQFN-IEQDGITSWPI 944 Query: 1023 GQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPI 1082 +LP EQ K +A+PALVD ++S++I++FDNP +Q GLRRL+ + Sbjct: 945 EELPIKVEQTINGKKFEAYPALVDYQNSISIEVFDNPKRAEQHHVQGLRRLIYFHFKERF 1004 Query: 1083 KYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVR 1142 K + + P+ ++ + + +L+++ VD++I + + + + L R Sbjct: 1005 KRIQKMPPDLSEAAIALSTQIPPKDLMENLCDVIVDEMI-GHKTNIRKQIDYEQLINDGR 1063 Query: 1143 AELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNG 1202 L + + + +I + I K + + + DI+ Q+ L+ Sbjct: 1064 NNLPRMIDHMTMHLNKIASFYKEIQKLRQSQ--SYIEEIEDDIEEQLEALLPPYEKPLFQ 1121 Query: 1203 FKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK 1262 + +L +YL+A++ R+EK P R + + +W+ K+ + ++ Sbjct: 1122 YDKLQFIPKYLEALKLRIEKY---PQRIDHDQECISQYNRIKNKWVEKVLGFVENELEIP 1178 Query: 1263 EI----RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 EI +W ++ELRVS+FAQ+L T PIS KR+ + QI Sbjct: 1179 EIYIDFQWKLQELRVSFFAQELKTNSPISVKRMDKEWTQI 1218 >UniRef50_A5WE54 ATP-dependent helicase HrpA n=4 Tax=Moraxellaceae RepID=A5WE54_PSYWF Length = 1438 Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/1346 (40%), Positives = 784/1346 (58%), Gaps = 143/1346 (10%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 D LPVS++ DI++AI DHQV+IVAGETGSGKTTQLPK+ M GRGI G IGHTQPRRLA Sbjct: 114 DELPVSKRSTDIIQAITDHQVIIVAGETGSGKTTQLPKLAMLAGRGITGQIGHTQPRRLA 173 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 AR+VANRIAEEL G + +K+RF++ S ++VKLMTDGILLAE+ DR L +YDTI Sbjct: 174 ARSVANRIAEELGEPLGETVSFKIRFNEQGSAQSVVKLMTDGILLAELGHDRFLTRYDTI 233 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----------A 244 IIDEAHERSLNIDF++GYLK+LLP+RPDLK+IITSAT+D RFS +F A Sbjct: 234 IIDEAHERSLNIDFIMGYLKQLLPKRPDLKVIITSATLDTGRFSEYFAQYDPVKKRMVPA 293 Query: 245 PIIEVSGRTYPVEVRYRPIVE---------EADDTERDQLQAIFDAVDELSQES------ 289 P+I+V GR YPVEVRYRP+ + DD E + +A+ AV+E +++ Sbjct: 294 PVIDVEGRGYPVEVRYRPLTDTPVSSSDDDSYDDFEDNLPRAVVAAVEECFEDAIAKGHP 353 Query: 290 -HGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLA 347 H DILIF + E EIR+ + L + RHTE+LPL+AR + +EQ R+FQ S GRRIV+A Sbjct: 354 EHADILIFAATEAEIREMQEVLVQHGPRHTEVLPLFARQTYAEQQRIFQPSGRGRRIVIA 413 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAET+LTVPGI+YVID G ARISRYSYR++VQRLPIE ISQA+ANQRKGRCGRV+ G+ Sbjct: 414 TNVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQAAANQRKGRCGRVAPGV 473 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLYSE+DF SRPEFT+PEILRTNLASVILQM +L LG + +F F+E PD R ++DG + Sbjct: 474 CIRLYSEEDFASRPEFTEPEILRTNLASVILQMASLRLGTVESFDFIEPPDSRLVKDGRK 533 Query: 468 LLEELGAITTDEQASA----------YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 LL+ELGA+T S KLT +G++++++P+DPRLARM++ C+ E Sbjct: 534 LLDELGALTPKNSDSKKPVAKQTLNDVKLTRIGQKMARMPIDPRLARMLVAGSDFDCMLE 593 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL-GEQQKALSSNA 576 +II +AL++QDPRERP +K+ +D+KH F ++SDFL +++LWN L G LSS+ Sbjct: 594 MLIIVAALAVQDPRERPAEKRAQADQKHAIFRQEDSDFLFYLSLWNALYGGGSNKLSSSQ 653 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS---------------------- 614 + + YL++ R+REW+ Y QL Q+V +L + +S Sbjct: 654 RKSFAKKHYLSFPRLREWEKTYRQLEQMVTDLKLLTDSGTEHKDKPHTQNDAAKGQRHAN 713 Query: 615 ---------------------------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGA 647 +Y +H ALLTGLLS I K + EY A Sbjct: 714 QAVTVAKSVATDLIVDNASDNKVNEAQRAVKYANLHRALLTGLLSVIAHKTDQRGEYLAA 773 Query: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 R + IFP S +FK+ P WVM E+VETS+++ R A+I+PEW+ +L+K Y EP Sbjct: 774 RQQKAKIFPASTVFKQVPAWVMAFEIVETSQVFMRTVAKIEPEWIISAGGNLLKYHYFEP 833 Query: 708 HWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFR 767 HW + G V A +++++GL +VA + NY QI+ RE+FIR LV G+ + F + Sbjct: 834 HWSKKTGRVRAYAQISLFGLIVVAKQLTNYEQINLEESREIFIRDGLVTGNLGRQAPFLQ 893 Query: 768 ENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDL 827 N+ A+VE +E K RRRD+LVD+E L++FY+++I + S + F+ W V ++ P Sbjct: 894 HNMDKIADVERIEEKLRRRDLLVDEEDLYQFYERKIPEHIASRKAFEDWRADVEKDDPKF 953 Query: 828 LNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVE 887 L F ++KE A ++P W G+LKL L Y F+P ++ DGVT+ +PL L Q++ Sbjct: 954 LFFTDEDVLKETAPTTG--EFPEVWQLGDLKLPLKYVFDPASEDDGVTIRVPLAALPQLD 1011 Query: 888 ESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV-KPLELPLLDSLERE 946 W +PG R ELV+ L+KSLPK +RR VP PN A++ + K + LL+ L + Sbjct: 1012 AIELLWGVPGWRYELVLQLLKSLPKEIRRKIVPIPNTADSLYDELEKNHQQGLLNQLCQA 1071 Query: 947 LRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSA 1006 L+R + V ED++ + +L+ VVDDK + +++GR L+ L+ K + LS+ Sbjct: 1072 LQRRGVLGVKPEDFNPSAIDRYLQPQICVVDDKKRVIEKGRDLKALQQRHASKTSQALSS 1131 Query: 1007 VADDGIEQSGLHIWSFGQLPESYEQKRGNYK----VKAWPALVDER--DSVAIKLFDNPL 1060 D G+H PE + + + +K + ALV + ++V I F + Sbjct: 1132 SQD----TQGVHT----SFPEHFRFSKNRHSAGIVMKEFSALVADEAGEAVTIHQFTDVT 1183 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 +A G+ L+ + + K L ++ KL F P G + +L + +D Sbjct: 1184 AALKAHRKGVLTLIRSKLGAKQKQLTSQIDKTFKLA--FAPLGDMEKLKTIVVDATLDAT 1241 Query: 1121 IDANGGPVWTEEGFA------ALHEKVRAELNDTVVDIAKQVEQILTA------------ 1162 ++A P + + A + EK+ +L + K E++L Sbjct: 1242 LEAY-APSFQDHDEALPDNADKVAEKLANQLPLDDTEFEKTSEKVLANFLLEGQKVLRLL 1300 Query: 1163 --VFNINKRLKGRVDM----TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAI 1216 V+ +R++ + M + DI+ Q+ L FV ++ RYL+A+ Sbjct: 1301 RDVYARWQRIRRSLLMLDRDVFGESIDDIEDQLDDLHLSDFVYRMAYEDWQQYPRYLEAL 1360 Query: 1217 EKRLEKLA--VDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVS 1274 E R+E+L +D D L V + A R +DE + + RW++EE R+ Sbjct: 1361 EIRIERLEHNLDGDLDAVYELDVHMERLA----------GRADDESISDYRWLVEEFRIQ 1410 Query: 1275 YFAQQLGTPYPISDKRILQAMEQISG 1300 FAQ + T +S KR+ + EQ++ Sbjct: 1411 LFAQPMKTRQSVSQKRLNKMWEQVNA 1436 >UniRef50_D2R0M6 ATP-dependent helicase HrpA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0M6_9PLAN Length = 1341 Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/1344 (39%), Positives = 762/1344 (56%), Gaps = 64/1344 (4%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE--- 65 + L+QR+D M RDR R L ++ + + Q + +AK +D A RE Sbjct: 4 YRQLEQRIDRAMQRDRHRLRNTLRAIQTAE--ERGQPFDERLAKFLDSLATSEFKREERA 61 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 +P + Y +LP++ K +I+ AI H VV+V GETGSGK+TQLPK C+E+GRGI+G I Sbjct: 62 QIKPRLEYDPSLPITAAKDEIIAAIEAHPVVVVCGETGSGKSTQLPKFCLEMGRGIRGWI 121 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRR+AAR+++ R+ EEL ++ +G+KVRF D D T+VK+MTDG+LLAE Q D Sbjct: 122 GHTQPRRIAARSISARLTEELGSQGSKQVGFKVRFHDSTDDRTLVKVMTDGVLLAETQTD 181 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN-- 243 R L QYDT+IIDEAHERSLNIDFLLGYL LL +R DL++IITSATID ER + HFN+ Sbjct: 182 RFLDQYDTLIIDEAHERSLNIDFLLGYLHRLLYKRNDLRLIITSATIDAERIAAHFNHTG 241 Query: 244 --APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGER 301 API++VSGR+YPVE+R+ P EE + + + A+ D+ + L +E+ GDIL+F+ ER Sbjct: 242 SPAPIVQVSGRSYPVEIRHEPPAEEQLEGA-ELITAVADSTERLLRETRGDILVFLPTER 300 Query: 302 EIRDTADALNK--LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 +IR L + +ILPLYARLS ++Q +VF +H+ RRIVLATNVAE+S+TVP Sbjct: 301 DIRIAHQVLRGRVASSGAIDILPLYARLSLADQQKVFAAHAKRRIVLATNVAESSVTVPA 360 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I V+D GTARISRYS R+KVQRLPIE ISQASANQR GRCGR++ GIC+RL+ E+DF S Sbjct: 361 ITAVVDTGTARISRYSPRSKVQRLPIERISQASANQRAGRCGRIAPGICVRLFGEEDFQS 420 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 R FT PEI RTNLA+V+LQ AL LG + FP ++ P I+DG + L EL AI Sbjct: 421 RDPFTSPEIQRTNLAAVLLQSLALDLGPLEEFPLLDVPRSEAIRDGFKTLFELQAIDDKR 480 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 + LTPLG +L++LPVDP +ARM+L A + + +II +AL +QDPR+RP DK Q Sbjct: 481 E-----LTPLGLKLARLPVDPSIARMLLAASAEHALADVLIIAAALEVQDPRDRPSDKAQ 535 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 + H ++ D +SDFL++++LW++L ++ LS R + ++L+ RVREWQD++ Sbjct: 536 EASAAHAQWSDPDSDFLSWLHLWDFLHGLKEKLSRGQLRMAMQRNFLSEPRVREWQDVHR 595 Query: 600 QLRQVVKELGIPVNS------------------------------------------EPA 617 QL ++ E G+ V E Sbjct: 596 QLLEMATEQGLQVGKRISPQIPPPHDHEEELQQQPTGRTPQRGRQPGRGSKNEASRVESP 655 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 Y IH ALLTGLL+ I + D EY ++ ++PGSG+ P W++ AELVETS Sbjct: 656 AYLAIHRALLTGLLTSIARR-TDTSEYQACGGQKYFLWPGSGVQHSRPAWIVAAELVETS 714 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNY 737 R + R ARI PEW+E +A HLI + YS+ W +G MA+E++ + GL + A R V Sbjct: 715 RKFARSVARIQPEWLEELALHLINKHYSDYRWSEKRGQAMASERLVLAGLTLAADRPVPL 774 Query: 738 SQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 + IDP+ RELFI L G + A R+N K+ E+ L K+RRRD+++D + L + Sbjct: 775 APIDPSAARELFIEQGLAAGLLPRKPAVVRDNEKVLEEIARLAAKTRRRDLVIDPQKLVD 834 Query: 798 FYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNL 857 FY +R+ +VI + WW K + L + L+ + E+ K YP+ Sbjct: 835 FYGKRLPREVIDMNSLERWWNKATNLERKTLQLTMNDLLDDEIERDVKTKYPDKLEVPGA 894 Query: 858 KLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRN 917 L L+Y FEPG ++DGVTV +P ++ + W +PGL E + ALI++LPK +RR Sbjct: 895 SLPLAYHFEPGTESDGVTVEVPAAAVSHLSAERLAWLVPGLLAEKIEALIRTLPKDIRRK 954 Query: 918 FVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVD 977 +PAP A ++ E LL L +L TG ++ + + ++P HL + RV D Sbjct: 955 IIPAPQVAREIASTLRFAEGRLLQVLATKLASHTGDRIEADSFDLTRLPPHLAMNVRVKD 1014 Query: 978 DKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYK 1037 + K + R ++K QS L W+FG LP G K Sbjct: 1015 AEGKVITASREWTEVKAVAGPAAAAAAPVATSGRWSQSKLKSWTFGDLPSEVVTTAGGVK 1074 Query: 1038 VKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGL 1097 + +PA+VD+ DSV+++L + PL+ + G+RR L + I+ LP AKL + Sbjct: 1075 LARYPAIVDDGDSVSLQLAETPLQAEALSRGGMRRFLAIEQNREIRGHVSWLPQLAKLRM 1134 Query: 1098 YFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEG-FAALHEKVRAE-LNDTVVDIAKQ 1155 + P L DD + + A G P LH + + L D+AK Sbjct: 1135 WSAPLCSKFPL-DDQLQLLIASRALAMGYPDLPRSADTYKLHISMATKHLPAAAQDVAKL 1193 Query: 1156 VEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQA 1215 + + A ++ T A L+D+KAQ+ L GF+ + L RY Q Sbjct: 1194 LPLLFEAYHQARLGIEQFKLSTAAYALADVKAQLAMLTPDGFLAATPWNWLLQFPRYFQG 1253 Query: 1216 IEKRLEK-LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVS 1274 I RL K LA RD+ VE +Q++W + + + ++E R+ IEELRVS Sbjct: 1254 ISARLRKLLAGGLARDKQNFAGVEKLQKSWSERVERERAQGTAPAALEEFRYSIEELRVS 1313 Query: 1275 YFAQQLGTPYPISDKRILQAMEQI 1298 FAQ+LGT P+S +R+ + + I Sbjct: 1314 LFAQELGTSIPVSVQRLEKNLAAI 1337 >UniRef50_C4KC73 ATP-dependent helicase HrpA n=1 Tax=Thauera sp. MZ1T RepID=C4KC73_THASP Length = 1411 Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/984 (49%), Positives = 640/984 (65%), Gaps = 44/984 (4%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P +P LPVS ++ +I A+ HQV+IV GETGSGKTTQLPKI M LGRG+ GLIGHT Sbjct: 75 PVPDFPPELPVSGRRDEIATALAAHQVIIVCGETGSGKTTQLPKIAMTLGRGVAGLIGHT 134 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRRLAAR A+RIA+ELK+ G +GYK+RF+D + + VKLMTDGILLAE Q D LL Sbjct: 135 QPRRLAARATASRIAQELKSPLGEVVGYKIRFTDKTGERSHVKLMTDGILLAETQTDPLL 194 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 243 YDT+IIDEAHERSLNIDFLLGYLK LLPRRPDLK+++TSAT+D ERF+RHF + Sbjct: 195 AAYDTLIIDEAHERSLNIDFLLGYLKTLLPRRPDLKVVVTSATLDAERFARHFADAAGKP 254 Query: 244 APIIEVSGRTYPVEVRYRPIVEE------------------ADDTERDQLQAIFDAVDEL 285 AP+IEVSGR YP+E+RYRP+ E A D RD + A+ DAVDE Sbjct: 255 APVIEVSGRLYPIEMRYRPVESEEIDPAAAARSAAKGGREAAKDRSRDLMDALVDAVDEA 314 Query: 286 SQESHGDILIFMSGEREIRDTADALNKL-NLRHTEILPLYARLSNSEQNRVFQSHSGRRI 344 + GD+L+F+ GEREIR+ A+AL K +L TEILPL+AR S EQ RVF + +GRR+ Sbjct: 315 QRCGPGDVLVFLPGEREIREAAEALRKAHHLPGTEILPLFARQSAQEQARVFSASNGRRV 374 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VL+TNVAETSLTVPGI+YV+D G ARI RYS R KV++L +E I++++A QR GRCGRV Sbjct: 375 VLSTNVAETSLTVPGIRYVVDTGLARIKRYSPRNKVEQLQVEKIARSAAQQRAGRCGRVM 434 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 +GICIRLY EDDF RP TDPEILR++LA VIL+M AL LG + FPF++AP R I D Sbjct: 435 DGICIRLYDEDDFNRRPAHTDPEILRSSLAGVILRMKALKLGAVEDFPFIDAPGARLIGD 494 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 G LL ELGA++ D++ KLTP G +L++LP+DPR+ RM+L A+ G + E ++I +A Sbjct: 495 GYALLAELGAVSDDDE---RKLTPTGVELAKLPLDPRIGRMILAARDRGALAELLVIAAA 551 Query: 525 LSIQDPRERPMDKQQASDEKHRRF----HDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 LS+QDPRERP D A+D+ H RF D++S+FL + +LW E Q+ SS+ + Sbjct: 552 LSVQDPRERPQDSPGAADQAHARFRGGEQDQKSEFLWYWHLWKAWDEVQRHESSSKQKAW 611 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAD 640 C+ +LNY+R+REW+D++ QL + E G N +PA Y IH ALL GLL +IG K D Sbjct: 612 CKKHFLNYMRMREWRDVFAQLHTLCAEHGWKENEQPANYEAIHKALLAGLLGNIGCKVED 671 Query: 641 KQ-----EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 Y GAR +F PGS L KK KW+M AE VETSRL+GR ARI+PEWVE V Sbjct: 672 ASGPQAGAYLGARGIKFWPHPGSALAKKAGKWIMAAEQVETSRLFGRCIARIEPEWVEEV 731 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 HLIKR EPHW +A GAV A E+ T+YGL I R V Y IDPALCRELFIR LV Sbjct: 732 GGHLIKRQVFEPHWSKASGAVRAWERGTLYGLVIYPRRGVAYRDIDPALCRELFIREGLV 791 Query: 756 EGDWQT----RHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISAR 811 +G+ AF N +L AE+E LEHKSRR D+LVD+ + FYD ++ +V Sbjct: 792 QGEIAEGPARAMAFLAHNQRLVAEIERLEHKSRRPDVLVDETLIEAFYDSKLPAEVCDLA 851 Query: 812 HFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADA 871 ++W K + P LL+ + L++ AE ++ +P KL+L+Y +PG Sbjct: 852 GLEAWRKPAEKAEPKLLHLSREQLMRHDAEGVTTDRFPPTLEVLGQKLKLAYLHQPGEAD 911 Query: 872 DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGR 931 DGVT+ +PL +LNQ+ + EW +PGL E V AL+K++P+ R P A AF+ Sbjct: 912 DGVTLAVPLAMLNQIPANRCEWLVPGLLEEKVAALMKTVPQKHRHRLQPVAESAAAFMAV 971 Query: 932 VKPLEL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGR 987 + E PLL L+R + + + E + + + H + FRV+D+ + + + R Sbjct: 972 FEAGEFDTDEPLLKMLQRFVEERVQLKLPLESFRPENLKPHCFMNFRVIDEHGRLMGQSR 1031 Query: 988 SLQDLKDALKGKVQETLSAVADDG 1011 +L +L+ + +V SA G Sbjct: 1032 NLMELRARFREQVAARFSAAKIGG 1055 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 4/216 (1%) Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 SG W+FG LPE E + +V +PAL D+ DSV+++ D P E + GL RL Sbjct: 1150 SGFTAWTFGALPELLEVRVAGREVIGFPALHDDGDSVSLRPHDTPEEASRVHRRGLARLF 1209 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 LN+ ++ + E+LP +L L + +G EL I + + P + F Sbjct: 1210 ALNLKDQVRAV-ERLPGLRELALQYMGFGTEAELKARLIEATLGRCCLLEPLPT-DADAF 1267 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 A + ++ ++ + + Q+L + KRL G T ++DI+ Q+G L+ Sbjct: 1268 AKRCAEAKSRVSLVAQEFMRLTGQLLVEHAALQKRLSGL--KTFPEVVADIQGQLGALLP 1325 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRD 1230 + F+ + +L RYL+ RL+KL +P RD Sbjct: 1326 KDFLVAFEWDKLAHFARYLKGAAVRLDKLRNNPARD 1361 >UniRef50_Q2LSZ0 ATP-dependent helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ0_SYNAS Length = 1282 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/1272 (40%), Positives = 762/1272 (59%), Gaps = 37/1272 (2%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 ++ K LR RP +TYP +LP++ ++++I++AI H+VV++ GETGSGKTTQLPK+C+ Sbjct: 15 RSGNKKELRRKNRPRVTYPADLPITARRREIVQAIARHRVVVITGETGSGKTTQLPKMCL 74 Query: 116 ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 E GRGI G+IG TQPRR+AA TVA RIAEEL G +GY++RF D + +++MTD Sbjct: 75 EAGRGINGIIGCTQPRRVAAVTVAERIAEELGQTVGQAVGYRIRFEDRSGPSPYIRIMTD 134 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 GILL E Q D LL YDTII+DEAHER+LNIDFLLGYLK LL +R DLKIIITSATID E Sbjct: 135 GILLMETQSDPLLHAYDTIIVDEAHERNLNIDFLLGYLKTLLRKRNDLKIIITSATIDTE 194 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL--SQESHGDI 293 +F+ F+ AP+IEV+GR YPVEV YRPI + D E ++A AV+EL + GDI Sbjct: 195 KFAAAFDGAPVIEVTGRVYPVEVLYRPIEQGDGDEEITHVEAAVRAVEELRARRSDRGDI 254 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 LIFM E++IRDT + L + ILPL+ARLS +EQ R+F + + ++I++ATN+AET Sbjct: 255 LIFMPTEQDIRDTCELLEGRRYENLVILPLFARLSWAEQRRIFSATTAQKIIVATNIAET 314 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLT+PGI+YVID G AR+S+Y+ RT+ LP+ IS++SA+QRKGRCGRV G+CIRLY Sbjct: 315 SLTIPGIRYVIDTGYARVSQYNPRTRTNSLPVRAISRSSADQRKGRCGRVQNGVCIRLYE 374 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E+D+L+RP+F+ PEILR+NLA VIL+M L LG AAFPF++AP+ ++++DG +L+ELG Sbjct: 375 EEDYLNRPQFSVPEILRSNLAEVILRMLKLRLGHPAAFPFIDAPNPKSVRDGFEILKELG 434 Query: 474 AITTDEQASA---------YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 AI+ ++ ++ +LT GR++++LP+DPR+AR++LEA+K GCV EA II S Sbjct: 435 AISIEKNRNSREEGNGEADVRLTERGRRMARLPMDPRIARILLEAEKEGCVEEATIIASG 494 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA-FRRLCRT 583 L IQDPRERP+D++ +D HR F D SDFL + +W+ Q+ L S R+ CR Sbjct: 495 LCIQDPRERPVDEEGLADAAHRVFLDPTSDFLTLLRIWDKYQRAQETLKSQGKMRKYCRV 554 Query: 584 DYLNYLRVREWQDIYTQLRQVVKE-------LGIPVNSEPAEYR-EIHIALLTGLLSHIG 635 +YL++ R+REW+DIY Q+R + +E + + + P + IH ++L+G LS I Sbjct: 555 NYLSWRRMREWKDIYEQIRTIRREEEKADRSISKKLAAAPEDLNAAIHRSILSGYLSGIA 614 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 +K +K Y+ R +FPGSGLF W++ AE+VETSRL+ RIAA I EW+E + Sbjct: 615 VKK-EKNIYSATRGREVMLFPGSGLFNSGGNWIVAAEMVETSRLFARIAANISSEWIEEL 673 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 A +L TYSEPHWE+ + V+A ++V+++GL IV RKV+Y+ IDP +F+R ALV Sbjct: 674 AGNLCTSTYSEPHWEKRREEVVAYQQVSLFGLVIVPQRKVSYAHIDPEEASRIFVRSALV 733 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 EG+ +T F N +L AEV +E K RRRD+L D+ L +FY R+ + + R Sbjct: 734 EGELKTPLPFLLYNRQLVAEVIGMEDKIRRRDLLQDESVLNDFYASRLP-GICNVRTLK- 791 Query: 816 WWKKVSRETPD-LLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV 874 +K+ + D L + ++ ++ +P+ G R Y+F+PG DGV Sbjct: 792 --RKIREQGGDAFLRMTPADVLTRLPDEEELSLFPDEVTVGGRSYRCVYRFDPGKADDGV 849 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP 934 T+ IP LL V + +W IPG R+ ++AL++ LPK R+ P A+ + + Sbjct: 850 TLKIPDVLLPDVPAAAADWMIPGHLRDRILALLRGLPKEYRKKLQPLAGTADYIVKHLGG 909 Query: 935 LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKD 994 PLL ++ LR GV + W +VPD L++ F VVD + ++ GR L L+ Sbjct: 910 PSGPLLSAVAGLLRERLGVDIPASAWSAREVPDFLQVRFAVVDGEGREKAAGRDLSLLQQ 969 Query: 995 ALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE-QKRGNYKVKAWPALVDERDSVAI 1053 L + A E+S L W FG++PES + G++K AWPAL V + Sbjct: 970 TLTAEQDSRAFEQARRKWEKSDLTAWDFGEIPESIDLHANGSFKGCAWPALTPGDGCVHL 1029 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCI 1113 +L+ E G+ L L +K L + L L + + V + + Sbjct: 1030 RLYKTREEAACVHREGIAALYGLYFTRELKELKKALKLTEPLKTWAESFIGVRNMESRLL 1089 Query: 1114 SCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNI-----NK 1168 L + V T E F A K+ ++ + + + VE +L A F I N Sbjct: 1090 EKVKKDLFAVD---VRTAEDFEAHARKIAGKILISGQEGIRTVEPLLKAWFEIAGDFRNL 1146 Query: 1169 RLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPH 1228 + R + + ++ +M GL+ F+ RL RYL+A++ R E+ ++P Sbjct: 1147 EIVNRGNSGAREFILQLRREMEGLLPADFLCRFDAGRLSHIPRYLKALKIRAERGLLNPE 1206 Query: 1229 RDRAQMLKVENVQQAWQQWINKLPPARREDED--VKEIRWMIEELRVSYFAQQLGTPYPI 1286 +DR + ++ + + + +++ + ++ MIEE +VS FAQ+L T +P+ Sbjct: 1207 KDRRRERELLPFVTRHNELVQNMTSGVSDEKQQALADLSLMIEEFKVSLFAQELKTAFPV 1266 Query: 1287 SDKRILQAMEQI 1298 S +R+ + + +I Sbjct: 1267 SARRLEEKLNEI 1278 >UniRef50_B8FCF5 ATP-dependent helicase HrpA n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCF5_DESAA Length = 1357 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/1331 (39%), Positives = 776/1331 (58%), Gaps = 68/1331 (5%) Query: 11 ALQQRLDSLMLRDRLRFSRRLHGVKKVK-NPDAQQAIFQEMAKEIDQAAGKVLLREAARP 69 +++ RL M RDR R+L ++ K + D + + ++ + + LRE +RP Sbjct: 48 SIRSRLPKAMGRDRHAILRQLDRLRSPKISLDKKSKTLSALQNQVAFSLKERKLREKSRP 107 Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 YP+ LP+S + ++I+EAI+++QVV++ GETGSGKTTQ+PK+C+ GRG+ GLIG TQ Sbjct: 108 SFAYPEELPISGRSEEIVEAIQENQVVVITGETGSGKTTQIPKMCLAAGRGVDGLIGCTQ 167 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDH--VSDNTMVKLMTDGILLAEIQQDRL 187 PRR+AA TVA RIAEEL + G +GYK+RF + S+ +K+MTDG+LLAE Q D Sbjct: 168 PRRVAAVTVAQRIAEELGEDLGKSVGYKIRFKETGGKSEAPFIKIMTDGVLLAEFQHDPF 227 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 +YDTII+DEAHERSLNIDF+LG LK LLP+RPDLK+IITSATID E+FS+ FN+API+ Sbjct: 228 FTKYDTIIVDEAHERSLNIDFILGILKNLLPKRPDLKVIITSATIDTEKFSKAFNDAPIV 287 Query: 248 EVSGRTYPVEVRYRPIVEEAD-DTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRD 305 EVSGR YPVEVRY P++ D +++ + AV+ + S+ GDIL+FM E +IR+ Sbjct: 288 EVSGRMYPVEVRYEPLLTSGDENSDAGYVDGAVRAVETIFSRRPKGDILVFMPTESDIRE 347 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 T D L + ILPL+ RL+ EQ RVF HSG ++V+ATNVAETS+T+PGI+YV+D Sbjct: 348 TCDLLQARRFPNALILPLFGRLAGGEQARVFARHSGIKVVVATNVAETSITIPGIRYVVD 407 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARISRYS RT LP++ IS++SA+QR GRCGRV+EGICIRLY E+D+ SRP+FT Sbjct: 408 TGLARISRYSPRTGTTSLPVDKISKSSADQRMGRCGRVAEGICIRLYDEEDYESRPQFTL 467 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA-SAY 484 PEILR NLA VIL+M A L ++ FPFV+ PD R+I+DG +L ELGA+ Q +Y Sbjct: 468 PEILRANLAEVILRMVASRLPEVHNFPFVDPPDPRSIRDGFNVLRELGALLDPRQGEKSY 527 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LTP GR +++LPVDPR++ +++EA GC+ EA+II SAL I DPRERP +K +D+ Sbjct: 528 TLTPKGRTMARLPVDPRISAILIEAHPRGCLAEALIIASALCIIDPRERPAEKAVQADQA 587 Query: 545 HRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 HR F SDFL ++NLW Y K S N ++ ++L+Y R+REW+D++ QL Sbjct: 588 HRTFAHGSSDFLFYLNLWQAYFQHMDKVKSGNQMKKWSIANFLSYKRMREWRDVHQQLTA 647 Query: 604 VVKELGIPVNSEP-----------AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 ++ + G N+ P Y +H ++ + LS + K DK Y G + Sbjct: 648 ILIDEGFIKNTLPMPKPFEPGMEDCRYEPLHQSIASAYLSQVASKK-DKNIYQGTKGREV 706 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 +FPGS LF +W++ A++V TSRL+ R+AA I PEW+E A L+ RTY EPH+E+ Sbjct: 707 MLFPGSFLFNHGGQWIVSAQMVHTSRLFARMAANILPEWLEEPAGPLLSRTYLEPHFEKN 766 Query: 713 QGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKL 772 +G V+A E+V++ GL I+A R +Y I+P ELFI+ ALVE + F N K+ Sbjct: 767 RGEVIAKEQVSLMGLIIIAGRPTSYGPINPQEATELFIQGALVECQTNEKFGFLAHNQKV 826 Query: 773 RAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEK 832 E ++E + RRRD++VD+ + FY+QR+ V S + K ++ ++ Sbjct: 827 LNEARDMEERLRRRDLVVDELGISRFYEQRLD-TVYSIQSLKKIIKDKGGDSFLRMDVTD 885 Query: 833 SMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFE 892 M+ AE +S+ YPN K +L Y+F+PG DGVT+ IP PL++ V E Sbjct: 886 VMVRSPEAEDLSQ--YPNRLKVDGAKFKLQYRFDPGRPGDGVTIKIPQPLVSSVPPEPLE 943 Query: 893 WQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV-KPLELPLLDSLERELRRMT 951 W +PGL E V A+IK LPKP+R VP + + ++ K L + +L + Sbjct: 944 WVVPGLLPEKVTAMIKGLPKPLRVKLVPVNKTVDRVMDKLDKYKHLSMGAALSHAIHETM 1003 Query: 952 GVTVDREDWHW-DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADD 1010 + + W +P HL V D K + ++ GR +++L +++ V D Sbjct: 1004 DIEIPAISWPGPSDLPPHLTARLAVTDSKGRVVRFGRDVREL--------AQSMGEVKDL 1055 Query: 1011 GI--------EQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQ 1062 G E++G+ W FG LP S K+G A+ L D V +K+ ++ ++ Sbjct: 1056 GHLEKLRKQWEKTGIKSWDFGDLPSSIPVKKG--APPAYVCLCPGDDCVDLKIVEDKVKA 1113 Query: 1063 KQAMWNGLRRLLLLNIPSPIKYLHEKLP---NKAKLGLYFNPYGKVLELIDDCISCGVDK 1119 + G+ L L IK++ + L N AK YF ++ +++ D + +++ Sbjct: 1114 QATHKKGVAALCTLECAKDIKHIKKYLALKGNAAKHAAYFGGTKQMEQVLFDTL---LER 1170 Query: 1120 LIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVE---QILTAVFNINKRL-----K 1171 ++ + TEE F E V+ + V K VE +I+ A + R+ + Sbjct: 1171 TLEKE---LHTEEEF---REHVKTRIPALVAQGEKLVESTSRIMEAFHKTSFRISELEAQ 1224 Query: 1172 GRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDR 1231 R + L +++ M L+ F RL RYLQA+ R E+ +D +D+ Sbjct: 1225 CRNNKFGLAFLKNLRTAMTQLLPPNFPNLYDDARLAHMPRYLQAVTIRAERGLLDLDKDK 1284 Query: 1232 AQMLKVENVQQAWQQWINKL----PPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 A+ +V + ++ +L P +R + V++ WMIEE +VS FAQ+L TP PIS Sbjct: 1285 AKAAQVREFEDHLRRLAKELGIKTTPEKR--QAVEDFFWMIEEFKVSVFAQELKTPMPIS 1342 Query: 1288 DKRILQAMEQI 1298 KR+ + + +I Sbjct: 1343 PKRLQKRLSEI 1353 >UniRef50_C2KSU4 HrpA family ATP-dependent helicase n=3 Tax=Mobiluncus RepID=C2KSU4_9ACTO Length = 1292 Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/1345 (40%), Positives = 766/1345 (56%), Gaps = 173/1345 (12%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++TYP LPV++ + +IL+A+R HQV++++G TGSGKTTQLPK+C+E+GRG G+IGHTQ Sbjct: 4 KLTYPPELPVTEARAEILDAMRHHQVIVISGATGSGKTTQLPKMCLEVGRGTNGIIGHTQ 63 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAARTVA RIA E+ G +GY+VRF +V +T +KLMTDGILL+E+ QD L Sbjct: 64 PRRLAARTVATRIAAEMDETLGQTVGYQVRFRQNVGADTRIKLMTDGILLSEMSQDPQLR 123 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-NAPIIE 248 +YDT+IIDEAHERSLNIDF+LGYL+ L+ RPDL +IITSATID +RF+ F + P+IE Sbjct: 124 RYDTLIIDEAHERSLNIDFILGYLQRLVKIRPDLLVIITSATIDSQRFATAFGVDTPVIE 183 Query: 249 VSGRTYPVEVRYRPIVEEAD-----------------------------DTERDQLQAIF 279 V+GRT+PVE+RYRP+V E D E DQ+ I Sbjct: 184 VAGRTFPVEIRYRPLVTEVSPGHLESCAIEPSLNPEKSLEIKETEVDVVDQEIDQVTGIL 243 Query: 280 DAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRH--------------TEILPLYA 325 AVDEL + GDIL+F++GE +IRDTA AL K +L H E+LPLY+ Sbjct: 244 RAVDELVEAGPGDILVFLAGEADIRDTAAAL-KGHLGHRFVEPDSKSNVPGAIEVLPLYS 302 Query: 326 RLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPI 385 RLS + Q +F HS RRIVLATNVAETSLTVPGI YVIDPG ARISRYS +T+VQRLPI Sbjct: 303 RLSEAAQQSIFAPHSLRRIVLATNVAETSLTVPGIVYVIDPGVARISRYSNKTRVQRLPI 362 Query: 386 EPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL 445 EPISQASANQR GRCGR GICIRLYS+ DFLSRPE+T+PEI RT+L++VILQM +LGL Sbjct: 363 EPISQASANQRAGRCGRTCPGICIRLYSQQDFLSRPEYTEPEIQRTSLSAVILQMASLGL 422 Query: 446 GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARM 505 G++A FPF++ P R++ DGV L +LGA+ D + ++T LGR++++LP+DPRLAR+ Sbjct: 423 GEVADFPFLDPPSPRSVTDGVLELSQLGAL--DTRKKPVRITRLGRKIARLPLDPRLARI 480 Query: 506 VLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL 565 +L A + G EA+I+ +AL++QD RERP +K+ +DE H RF D+ SDFLA++ LW+YL Sbjct: 481 LLAADELGVASEAVIVVAALAMQDVRERPSEKRSEADEMHARFEDERSDFLAYLRLWSYL 540 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI------PVNSEPAEY 619 Q+ +LS +AFRR C ++L+YLRVREW D+ QLR++++E+GI +N + + Sbjct: 541 QRQKGSLSGSAFRRRCSREFLHYLRVREWFDLAKQLREMLQEIGINTRSLNEINVDVVDA 600 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL 679 +H ALL G+L+ IG + K+EY GAR +F ++PGSGL K WVM AELVETSRL Sbjct: 601 NALHQALLYGMLAQIGYWSSQKREYLGARGQKFVVWPGSGLTSKHYDWVMAAELVETSRL 660 Query: 680 WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ 739 + R AR++PEW+E ++L+ R+Y EP+W A M E+VT+YGL +VA R + Sbjct: 661 FARTVARVEPEWIEQAGKYLLVRSYFEPYWSLRAQAAMIHERVTLYGLTLVADRAHTLAS 720 Query: 740 I-------DPA--LCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDIL- 789 + PA L R LFIRHALV G+W+ AF + N + +E +R R + Sbjct: 721 LGSTLVENQPARDLARALFIRHALVAGEWRENPAFIQTNRERLVAAQE----ARVRLQIP 776 Query: 790 --VDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI--KEGAEKISK 845 +DD TL ++D+++ +V SA F++WWK E P L+F +L+ E A++ Sbjct: 777 GEIDDFTLESWFDKKLPENVTSAAAFNAWWKTKRFEDPQYLDFPWELLVPASEDAQQ--- 833 Query: 846 LDYPNFWHQGNLKLRLSYQF---------EPGAD-------------------------- 870 +P+FW+Q L L+Y F P AD Sbjct: 834 --FPDFWNQNETLLPLAYTFGGKRGGITTAPTADIHRNTTQSKRHKSSRIPQREIDVVDL 891 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAE---- 926 ++GVT+ IP L ++ +GF+W IPG RE ++A IK+LPK VR+ VPA E Sbjct: 892 SEGVTIIIPERSLETIDPTGFDWPIPGALREHLLARIKALPKQVRKKVVPAAALVEEIWE 951 Query: 927 ---AFLGRVKPLELPLLDSLERE----LRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK 979 A+LG V P E P LD + + RR+ D H + +P++ + F ++ K Sbjct: 952 PISAYLG-VNPSERPSLDQVFSQAIATARRVELSRGDLSAMH-EALPENQRNHFAIITAK 1009 Query: 980 NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK 1039 + L +G L++ L + + Q +W + ++ +K +Y Sbjct: 1010 GRVLAKGDDFSVLRNTL----------IVNTTTHQG--KVWHQQEAEKAKVEKPRDYAAA 1057 Query: 1040 AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF 1099 AL + P + W G L P P Sbjct: 1058 LTEAL------------ELPQTRVITRWRGAEAAALAASPYP------------------ 1087 Query: 1100 NPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI 1159 +++ + + A G + E+ L + DTV I + V Sbjct: 1088 -STAALVQAAQSAAGVALTQEWLATGHQLEGEDDLVQLQAECANRFEDTVYRILQGVAAT 1146 Query: 1160 LTAVFNINKRL---KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAI 1216 + + + + + + T+ + +I + L+ F+ +K L +YLQA Sbjct: 1147 MHQRVELQRVIENARAKASPTLHHTIQEIVNHVNQLLEGDFLARTPYKWLQRLEKYLQAD 1206 Query: 1217 EKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL---PPARREDEDVKEIRWMIEELRV 1273 RLEK + D ++ V + ++ + + P ++EI W++EE R+ Sbjct: 1207 TLRLEKARHNSAADAELSQRLAEVTRDFETSVATIKARPFHADTHRKIQEIYWLLEEFRL 1266 Query: 1274 SYFAQQLGTPYPISDKRILQAMEQI 1298 S FAQQLGT +S KR+ + + +I Sbjct: 1267 SLFAQQLGTIEKVSAKRLRKLLAEI 1291 >UniRef50_A0LMI5 ATP-dependent helicase HrpA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LMI5_SYNFM Length = 1309 Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/1296 (39%), Positives = 761/1296 (58%), Gaps = 88/1296 (6%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 I YP +LP+ + + +IL AI ++QVV++ GETGSGK+TQ+PK+C+E GRG +G+IG TQP Sbjct: 25 IRYPSDLPIVEHRGEILGAIAENQVVVITGETGSGKSTQIPKMCLEAGRGARGMIGCTQP 84 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA T+A+R++EEL +GYK+RF D + +T +K MTDGILLAE Q DR Sbjct: 85 RRIAAVTLADRVSEELAETGPRRVGYKIRFHDRTTRSTRIKFMTDGILLAEAQSDRHFRA 144 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDT++IDEAHER+LNIDFLLG +K +LPRRP+LK+IITSATIDP +FS+ F +APIIEVS Sbjct: 145 YDTLVIDEAHERTLNIDFLLGLIKRILPRRPELKVIITSATIDPGKFSKAFQDAPIIEVS 204 Query: 251 GRTYPVEVRYRPIVE----EADDTERDQLQAIFDAVDEL---SQESH-GDILIFMSGERE 302 GRTYPV+VRYRP EAD + + A DEL QE GDIL+FM E + Sbjct: 205 GRTYPVDVRYRPPANGEGPEADAEDITHIDQAVAATDELKGSGQEGRRGDILVFMPTESD 264 Query: 303 IRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKY 362 IR+T L++ +T ++PL+ R++ ++Q RVF + +I++ATNVAETS+T+P IKY Sbjct: 265 IRETVQRLDEKRYFNTVVIPLFGRMAAADQKRVFLPTTEDKIIVATNVAETSITIPRIKY 324 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 VID G AR+S+Y+ R++ Q LP+ +S+ASA+QRKGRCGRV GICIRLYS +D+L+RP Sbjct: 325 VIDTGLARVSQYNTRSRTQSLPVARVSRASADQRKGRCGRVEAGICIRLYSVEDYLARPL 384 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 +T PEILR+NLA VIL+M L LG I FPF++ P ++DG +L ELGA+ DE Sbjct: 385 YTAPEILRSNLAEVILRMLFLRLGSIQEFPFLDPPSPSAVKDGFAVLRELGAV--DEH-- 440 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 +LT +GR +++LP+DPRL+RM+L+A++ G V E I+ +ALS+QDPRERP+DK+ +D Sbjct: 441 -RRLTAMGRVMARLPLDPRLSRMLLQAREEGAVTELTILAAALSVQDPRERPLDKETQAD 499 Query: 543 EKHRRFHDKESDFLAFVNLWNYL------------------------------------- 565 + H F D SDF+ + +W Sbjct: 500 QAHAVFRDTRSDFVTLLKIWEKCWPRCEAAIASSEARPQDPDRGAAANGPTRHDVALGTR 559 Query: 566 GEQQ----KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG-IPVNSEPAEYR 620 GE + + S + R+ CR +L+Y R+REW+D++ ++R++++E+G P NS+PA Y Sbjct: 560 GENRLVRYASRSQSQLRKFCREHFLSYRRMREWRDVWEEIREILEEMGGFPENSDPAGYE 619 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 IH ++++G LSHI M+ +K YTG +N + +FPGSGLF + WV AE+V+T+RL+ Sbjct: 620 AIHRSVVSGYLSHIAMRK-EKNIYTGTKNRQVMLFPGSGLFNRGGAWVTAAEVVQTTRLF 678 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R+AA +DPEW+E + HL + T EPHWER +G V A E+VT+YGLP+V RKVN+ + Sbjct: 679 ARMAANVDPEWLERLGGHLCRSTVFEPHWERKRGQVTAFERVTLYGLPVVDRRKVNFGAV 738 Query: 741 DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYD 800 PA R++FIR AL+E D + F N L ++EE+E K+RRRD+LVD+ET+F FYD Sbjct: 739 RPAEARDIFIRSALIEYDVPKPYGFLDHNRDLVRQIEEIESKTRRRDLLVDEETVFRFYD 798 Query: 801 QRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLR 860 +R+ + R D W K + L +S +++ + +P+ +++L Sbjct: 799 RRLPA-ICELRSLDKWIKDHGGD--HFLRMTESDILRTEPDFGELELFPDRLKLEDVELP 855 Query: 861 LSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVP 920 L Y F PG + DG+T +P+ +L ++ FEW +PG+ E + L+K LPK RR VP Sbjct: 856 LRYAFRPGEEDDGITATVPVHVLPRLAPQSFEWLVPGMLAEKLAILLKGLPKSQRRQLVP 915 Query: 921 APNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKN 980 A + ++ + L +R + GV+V + W +P HL++ + + Sbjct: 916 VGETAARLIEMLRRRSGDFHEQLSLCVRELAGVSVPVDQWRRIDLPPHLRMRLEITGPEG 975 Query: 981 KKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK- 1039 L GR L +LK K ++ L A E+ GL WSFG+LPE + + Sbjct: 976 NLLGVGRDLLELKSLAVEKHEDRLWEQARAAWEREGLTSWSFGELPERVPIGKDALGLTR 1035 Query: 1040 -AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLP-NKAKLGL 1097 A+P LV E + A++L+ P E +A GLR L L +KY +K + Sbjct: 1036 YAYPGLVAEGQTAAVRLYAEPEEATRASAGGLRLLFELTFGDELKYFRRDWTFSKKTASM 1095 Query: 1098 YFNPYGKVLELIDDCISCGVDKL------IDANGGPVWTEEGFAALHEKVRAELNDTVVD 1151 F G+ ++ + C D + +DA G P + F + ++ L Sbjct: 1096 LFFMGGR-----EEAVRCLHDYILRELFELDAPGLPSYGR--FYDVVRRLTGRLGAAARA 1148 Query: 1152 IAKQVEQILTAVFNINKRLKGRVDMTMA--------LGLSDIKAQMGGLVYRGFVTGNGF 1203 + +VE ++ + ++ M A LGLS ++ LV F+ +G Sbjct: 1149 LLDEVEAVIGERESTRSEIERYKRMAEANPAAVRCLLGLS---RELVTLVPGNFLVQSGS 1205 Query: 1204 KRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED--V 1261 R+ + RYL+A+ R E+ P +DR + ++ ++ ++ ++ E Sbjct: 1206 DRMRELPRYLKALRLRAERAYAAPEKDRLKAGQIAPYEKHLEEMRTRISEHSEESPRRLY 1265 Query: 1262 KEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 +E R M+EE ++S FA ++ T + IS KR+ + +E+ Sbjct: 1266 EEYRTMLEEFKISLFAPEIKTRFRISAKRLDEKLEE 1301 >UniRef50_C0QAN7 HrpA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAN7_DESAH Length = 1333 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/1316 (39%), Positives = 760/1316 (57%), Gaps = 59/1316 (4%) Query: 29 RRLHGVKKVKNPD--AQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDI 86 +RL + K PD Q+ + +D++ + R+A+ P+I Y LP++ KK +I Sbjct: 27 QRLKRLIKQNTPDRAGLQSRIAALEGRVDKSRQEREQRQASMPDIAYLPELPITGKKDEI 86 Query: 87 LEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEEL 146 + A++ H+VVI++GETGSGKTTQ+PK CM GRG G IG TQPRR+AA TVA RIAEEL Sbjct: 87 IHALKFHRVVIISGETGSGKTTQIPKFCMAAGRGAAGKIGCTQPRRIAAITVAARIAEEL 146 Query: 147 KTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNI 206 PGG +G+K+RF D S ++++K+MTDGILLAE Q D L +YDTII+DEAHERSLNI Sbjct: 147 GQLPGGVVGHKIRFDDRSSKDSIIKIMTDGILLAETQHDPFLNEYDTIIVDEAHERSLNI 206 Query: 207 DFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEE 266 DF LG L+ L+ +RPDL +++TSATID E+FS+ F+NAP+IEVSGR +PVE+RY PI + Sbjct: 207 DFTLGILRNLVRKRPDLTLVVTSATIDTEKFSKAFDNAPVIEVSGRMFPVELRYAPIDDP 266 Query: 267 ADDTERDQ--LQAIFDAVDELSQESH-GDILIFMSGEREIRDTADALNKLNLRHTEILPL 323 +D DQ ++A AVDE+ ++S GDIL+FM ER+I +T + + T +LPL Sbjct: 267 DNDDLDDQGYVEAAAGAVDEIQRQSRTGDILVFMPTERDIEETIELIQGRKYPGTLVLPL 326 Query: 324 YARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383 +ARLS +Q RVF GR+I+++TNVAETSLT+PGIKYV+D G ARI YS RT+ L Sbjct: 327 FARLSARDQARVFSRGVGRKIIVSTNVAETSLTIPGIKYVVDSGLARILHYSPRTRTTAL 386 Query: 384 PIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTAL 443 P+ PIS++SANQR GRCGRV+ GICIRL+SED F SRP FT PEILR+NLA VIL+M +L Sbjct: 387 PVSPISRSSANQRMGRCGRVANGICIRLFSEDAFESRPLFTSPEILRSNLAEVILRMISL 446 Query: 444 GLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT----TDEQASAYKLTPLGRQLSQLPVD 499 LG++AAFPF++ P ++I+DG L ELGAI + Q Y LT GR ++++PVD Sbjct: 447 KLGNVAAFPFIDPPAPKSIKDGFDTLVELGAIQQRRGKNNQRGGYALTTRGRVMAKIPVD 506 Query: 500 PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV 559 P+L+R++LEA +GC+ EA++I SALSI DPR+RP DK Q +D+ H F D SDF+ + Sbjct: 507 PKLSRILLEADHNGCLDEAVVIVSALSIADPRQRPKDKVQHADQMHAAFKDPSSDFVTLL 566 Query: 560 NLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE 618 N+W Y+ + + N RR C+ ++L++ R REW DI Q+R V+KE GI ++ + Sbjct: 567 NIWKAYVAAEHSLKTRNQVRRFCKDNFLSFRRFREWGDIQHQIRSVLKEHGITRSNTDST 626 Query: 619 --------------------YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 Y +H ++L G L++I K +K YT + +IFPGS Sbjct: 627 VTKVGTKGLKAKAFEIGGPFYTALHKSILAGYLANIAQKK-EKNNYTATKGRAATIFPGS 685 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 GL+ W++ AE VET++L+ R A IDP+W+E Q L+ RT+S P WE+ +G V+A Sbjct: 686 GLYNSGGSWIVAAEFVETTKLFARGVAIIDPQWLEETGQELLTRTWSTPRWEKQRGEVVA 745 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 TE+++++GL IV R V Y +I+P E+FIR ALVE + F N L E+ + Sbjct: 746 TEQISLFGLVIVPERTVAYGKINPREAGEIFIRQALVEQEVARPLGFMVHNQALIDELRQ 805 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 +E K+RRRDI+V ++ +F FY QR+ D + F + K+ + L L + Sbjct: 806 VEEKTRRRDIVVTEDDMFLFYQQRLDQDFSNLATFTRFLKEQGSDL--FLRMTLEDLQQR 863 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 ++ L +P+ G RL Y F+PGA+ DGVTV +P V S + +PGL Sbjct: 864 SPDRDELLKFPDSLEMGGGSFRLEYGFQPGAETDGVTVKVPATSAASVSVSTIDRLVPGL 923 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958 E + ALIK+LPK R VP + A + + PL L +++ V + Sbjct: 924 LTEKIAALIKALPKRFRVRLVPVADTAAMIADSLPESDRPLFVELSHFIKQRFKVDIPPS 983 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGK-VQETLSAVADDGIEQSGL 1017 W + +HLKI + D K K++ R L KG + L A +E++G+ Sbjct: 984 AWSDATLEEHLKIRISITDAKGKEVAASRENDLLDKYAKGHGSNDLLFEDAKRRLERTGV 1043 Query: 1018 HIWSFGQLPESYEQKRG---NYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 W FG + +G +Y V + L E V ++LF + E +++ G+ +L Sbjct: 1044 TSWDFGDISSPVLLGQGQELSYNV--YYGLQSEEQGVGLRLFKSHAEARRSHVAGVEKLS 1101 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 + + K L + + L + +G + +SC +L + V T + F Sbjct: 1102 TICFEADFKALKKDVKKWTLLRPRTSKFGGWERFQNALVSCVFRELFSRD---VRTPKAF 1158 Query: 1135 AALHEK-------VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKA 1187 L +K EL T+V + + ++ LT + N+ + G +A+ + ++ Sbjct: 1159 LELADKHLPLVYRHGEELMKTMVTLFDEHDRTLTLLKNLFLK-SGNRPTVLAMAQT-LEK 1216 Query: 1188 QMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQW 1247 + L+ F + F R+ RY+ AI R E+ AV+P +D + V Sbjct: 1217 DLAALLPELFPSLYDFTRIKKLERYVAAIRIRAERGAVEPVKDSVKAGLVAEHTLKLNNL 1276 Query: 1248 INKLP--PARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI------LQAM 1295 + L +R + E V+ WMIEE +VS FAQ+LGT IS KR+ +QAM Sbjct: 1277 VATLSKESSREKVEAVEAFYWMIEEYKVSVFAQELGTLVKISPKRLNTMWREIQAM 1332 >UniRef50_D0W5V2 ATP-dependent helicase HrpA n=3 Tax=Neisseria RepID=D0W5V2_NEICI Length = 1417 Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/790 (56%), Positives = 576/790 (72%), Gaps = 53/790 (6%) Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 L R AA P+ + + LPV +K ++I +AI ++QV I+ GETGSGKTTQLPKIC+ELGRG Sbjct: 44 LKRLAALPKPEFDNTLPVHEKLEEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGA 103 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 GLIGHTQPRRLAAR+VA RIAEELK+E G +GYKVRF+DH S + VKLMTDGILLAE Sbjct: 104 AGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAE 163 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 Q DR L YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID ERFS+HF Sbjct: 164 TQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHF 223 Query: 242 NNAPIIEVSGRTYPVEVRYRPIV-EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 N+AP++EVSGRTYPVE+ YRP+ ++ DD E + I DA DEL+ GDIL+F+ GE Sbjct: 224 NSAPVLEVSGRTYPVEILYRPLTSKDEDDAEVELTDVIVDAADELAGHGEGDILVFLPGE 283 Query: 301 REIRDTADALNKLNL-RHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLATNVAETSLTVP 358 REIR+ A+AL K L R+ EILPL+ARLS++EQ+++F + + RRIVLATNVAETSLTVP Sbjct: 284 REIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPTGAKRRIVLATNVAETSLTVP 343 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GIKYVID G AR+ RYS R KV++L +E ISQA+A QR GRCGRVS G+CIRL+SE+DF Sbjct: 344 GIKYVIDTGLARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFN 403 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 +RPEFTDPEI+R+NLA+VIL+M +L LGD+AAFPF+E PD R I DG ++L ELGA+ Sbjct: 404 NRPEFTDPEIVRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDGFQVLLELGAVNEH 463 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 LT LG Q++ LP+DP++AR++L A+KH C+ E ++I SALSIQDPRERP++ + Sbjct: 464 N-----GLTRLGEQMAHLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEAR 518 Query: 539 QASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 A+ + H RF DK+SDFLA++N+W+ + E+ K LS+ + CR +L++LR+REW+++ Sbjct: 519 DAAAKAHERFTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWREL 578 Query: 598 YTQLRQVVKELGIPVNS------------EPAE--------------------------- 618 + QL Q E+G+ +P+E Sbjct: 579 HHQLAQTAIEMGLTTKEATFRRPPTQEQLKPSESQGDQDLSAKLKQKQLDKKQHRAQIHA 638 Query: 619 -----YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAEL 673 Y +IH ALLTGL++++GMK D +YTGAR +RF +FP S LFK PKWVM AEL Sbjct: 639 AKEAGYEQIHRALLTGLITNVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAEL 698 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAAR 733 +ET+RL+ R A I PEW+E A HL++ Y EPHWE+ +G V+A+E+VT+YGL ++ R Sbjct: 699 METTRLYARDVAVIQPEWIEQEAPHLVRYHYYEPHWEQKRGEVVASERVTLYGLTVLPRR 758 Query: 734 KVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDE 793 V+Y ++ P RE+FIR ALV + + AFF N KL E+ ELEHKSR++D+LVDDE Sbjct: 759 PVSYGKVAPEEAREIFIRGALVAQESNLQTAFFAHNKKLIKEITELEHKSRKQDVLVDDE 818 Query: 794 TLFEFYDQRI 803 LF FY++R+ Sbjct: 819 ALFAFYNERL 828 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 140/494 (28%), Positives = 241/494 (48%), Gaps = 15/494 (3%) Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 R F++W K R+ P LL + L++ A I++ +P FW + K +LSY+FEP Sbjct: 921 RTFEAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHP 980 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 DGVT+ +PL +LN++ EW +PG+ RE + LIK+LPK +RR VP P++ FL Sbjct: 981 LDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPKQIRRICVPVPDFITKFLE 1040 Query: 931 RVKPLELPLLDSLERELRRMTG-----VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 + ++ L + + G +D++ W ++P+H + R++DD ++L Sbjct: 1041 SNPDRQAAIIPQLAHFIAKSAGDMRILEQIDQDAWAAQELPEHCYLNLRIIDDGGQELAG 1100 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 GR L +L+ L T + E+ + W G LPES + RG ++ + L Sbjct: 1101 GRKLHELQQQLGQAAAVTFRDNTQE-FERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQ 1159 Query: 1046 DERDS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 E+D +A++LFD +QA G+ L+ L + +K L++ + + + + Sbjct: 1160 KEKDGRIALRLFDTSAAAEQAHRLGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLK-HIN 1218 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 L DD D+ E+ F ++ R+ L +++ +++ + A Sbjct: 1219 ADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETVAAYA 1278 Query: 1165 NINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA 1224 +N +L + +T L L GF T + + YL+A+ RLEK + Sbjct: 1279 ELNGKL-SKHPLTHLLRLRLQTLLAA-----GFATRTPWAQWPRLPIYLKAMTLRLEKYS 1332 Query: 1225 VDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED-VKEIRWMIEELRVSYFAQQLGTP 1283 + RD A+ ++ ++Q WQ+ + L D + +WMIEELRVS FAQ+L TP Sbjct: 1333 SNLARDDAREADIQELEQMWQEKTDSLIKQGLPISDSLAGFKWMIEELRVSLFAQELKTP 1392 Query: 1284 YPISDKRILQAMEQ 1297 YP+S KR+++ E+ Sbjct: 1393 YPVSVKRLMKVWER 1406 >UniRef50_C5BVQ3 ATP-dependent helicase HrpA n=3 Tax=Bacteria RepID=C5BVQ3_BEUC1 Length = 1471 Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/1122 (45%), Positives = 673/1122 (59%), Gaps = 99/1122 (8%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL-NKLNLRHT--------- 318 D E DQ AI AVDEL+ GD+L+F SGEREIRD ADAL + L R+T Sbjct: 357 DEELDQPTAICRAVDELTALGPGDVLVFCSGEREIRDAADALASHLGTRYTAPGARNTAP 416 Query: 319 ---EILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 E+LPLYARLS +EQ+RVF H RR+VLATNVAETSLTVPGI YV+D G ARISRYS Sbjct: 417 GAVEVLPLYARLSAAEQHRVFAPHPYRRVVLATNVAETSLTVPGIHYVVDTGLARISRYS 476 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLAS 435 RTKVQRLPIEPISQASANQR GRCGRV++G+ IRLYS DF RPEFT+PEILRT+LAS Sbjct: 477 QRTKVQRLPIEPISQASANQRSGRCGRVADGVAIRLYSRGDFDRRPEFTEPEILRTSLAS 536 Query: 436 VILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI--TTDEQASAYKLTPLGRQL 493 V+LQM ALGLG + AFPFV+ PD R I+DGV LL ELGAI + A +LT +GRQL Sbjct: 537 VVLQMAALGLGRMDAFPFVDPPDTRAIRDGVALLTELGAIEEGQGDDAEDVRLTDVGRQL 596 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKES 553 +QLP+DPRL RM++EA + G VRE M++ +ALS+QD RERP D QQA+D+KHRRF D S Sbjct: 597 AQLPIDPRLGRMLVEAGRLGVVREVMVLVAALSVQDVRERPADHQQAADDKHRRFADPTS 656 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP-- 611 DFL LW YL +QQKA+ S+AFRRLCR+++L+YLRVREWQD++ QLRQ+ K LG+ Sbjct: 657 DFLTLYTLWTYLQDQQKAMGSSAFRRLCRSEFLHYLRVREWQDVHAQLRQLGKGLGLRPE 716 Query: 612 --VNSEPA----------EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 + PA + +H ALL GLLSH+G D ++EY GAR +RF +FPGS Sbjct: 717 PRADDAPAGVGDVRKPKVDSDAVHRALLAGLLSHLGSWDERRREYAGARGSRFVVFPGSS 776 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 L +KPP W++ AELVETSRL+ R AARI PEW E +HL+KRTYS P W QGA M Sbjct: 777 LARKPPAWIVAAELVETSRLFARTAARIQPEWAEQAGEHLVKRTYSGPFWSAKQGAAMCH 836 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 EKV ++G+PIVA R V ++++DPA RE+F+R+ALVEG+W+T HAF R N ++ E ++ Sbjct: 837 EKVLLFGVPIVADRVVPFARVDPAAAREMFLRNALVEGEWRTHHAFVRRNAEVLDEARQI 896 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E ++RRR +LVDDE L +F+D+R+ V +AR FD+WWK R PDLL + +L+ Sbjct: 897 EDRARRRGLLVDDEALVDFFDERVPESVTTARAFDAWWKDARRADPDLLTYTLDLLVPT- 955 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 A + +P W QG+L L L+YQF PG DADGVTVH+P+ +LN+V +GF+W +PGL Sbjct: 956 AHAVDDAGFPRTWTQGDLTLPLTYQFTPGTDADGVTVHVPIAVLNRVRPAGFDWLVPGLL 1015 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV--------KPLELPLL-DSLERELRRM 950 +LV A I++LPK VR VPAP+ A+A + R+ P P ++ +R + Sbjct: 1016 TDLVTATIRALPKQVRVQLVPAPDVAQAVVARLPDWADVAPAPDGAPSFHEAFASAVREV 1075 Query: 951 TGVTVDREDWHW--DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQ------- 1001 V V E +++P HL++TFRV+ ++ ++L EG SL L+ L + Q Sbjct: 1076 RDVVVPAEALEEADERLPAHLRMTFRVLGERGQELDEGHSLVALQRRLAAQAQSAVRSAV 1135 Query: 1002 ---------------------ETLSAVADDGIEQSGL-------HIWSFGQLP------E 1027 ET A+ G EQ G + ++ +P E Sbjct: 1136 RAALADASRTAAVPAGPVASPETTPTTAESG-EQQGRTGGAEVDTVRTWADVPGEAIPAE 1194 Query: 1028 SYEQKRGNYKVKAWPALVDE------RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSP 1081 ++ +PALV E R VA+++ + + +G+R LLL P Sbjct: 1195 LATTGPAGLDIRGYPALVVEPDPDGGRTRVALRVLADAERARAQHADGVRALLLQEFAIP 1254 Query: 1082 IKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKV 1141 + + + L L +PY L+ D V +L G T AA + +V Sbjct: 1255 TARVTSRWTGREALTLASSPYRDTDALVRDVQVAAVAQL---TAGTDLTTVRDAASYRRV 1311 Query: 1142 RAE----LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 RA+ L D V + +V + L A ++ ++ M + L+ ++ LVY GF Sbjct: 1312 RADVRDHLEDAVYGVVARVVEALQAHRELDSAVRASTSMALLGTLTQVRDHAASLVYDGF 1371 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQW-INKLPPARR 1256 V + L RYL+A RL K A +P RD +V ++ A L P R Sbjct: 1372 VARTPPESLRHLARYLRADGYRLAKAAENPGRDATLAWEVSELEDALASVRATHLSPDRA 1431 Query: 1257 EDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + +RW +EELRVS FAQQLGT P+S KRI A+ Q+ Sbjct: 1432 ARAEA--VRWQLEELRVSLFAQQLGTAQPVSAKRIRTALAQV 1471 Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 150/229 (65%), Positives = 179/229 (78%), Gaps = 15/229 (6%) Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 ++ +R AA P + +P +LPVS ++ DI AIRDHQVV+VAGETGSGKTTQLPKIC+ELGR Sbjct: 50 QLAVRRAALPTLAFPPDLPVSARRDDIAAAIRDHQVVVVAGETGSGKTTQLPKICLELGR 109 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 GI G IGHTQPRR+AAR+VA RIA E E GG IGY+VRF+DHV T+VK+MTDGILL Sbjct: 110 GITGTIGHTQPRRIAARSVAERIASECDVELGGAIGYQVRFTDHVGPTTLVKVMTDGILL 169 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 +EIQ+D L +YDTII+DEAHERSLNIDF+LGYL+ LLPRRPDLK+IITSATID ERF+ Sbjct: 170 SEIQRDPTLSRYDTIIVDEAHERSLNIDFILGYLRRLLPRRPDLKVIITSATIDSERFAA 229 Query: 240 HF---------------NNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 HF AP+IEV+GRTYPVE+RYRP+V +D E D Sbjct: 230 HFAQRDGVVVPRIGDPGTPAPVIEVNGRTYPVEIRYRPLVPGEEDEEPD 278 >UniRef50_Q1H207 ATP-dependent helicase HrpA n=3 Tax=Methylophilaceae RepID=Q1H207_METFK Length = 1376 Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/1026 (44%), Positives = 653/1026 (63%), Gaps = 16/1026 (1%) Query: 278 IFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQ 337 I D+V++LS+ GDIL+F+ GEREIR+TAD LNK +LRH EILPL+ARLS +Q +VF+ Sbjct: 359 ILDSVEQLSRLGGGDILVFLPGEREIRETADYLNK-HLRHVEILPLFARLSIEDQQKVFR 417 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 S GRR+VLATNVAETSLTVPGIKYVID G AR++RYS R KV++L +E ISQA+A QR Sbjct: 418 SSGGRRVVLATNVAETSLTVPGIKYVIDTGLARVNRYSARAKVEQLQVEKISQAAARQRA 477 Query: 398 GRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 GRCGRVS GICIRLY E DF RPEFTDPEILR++LA+VIL+M AL LG++ FPF+EAP Sbjct: 478 GRCGRVSNGICIRLYDEADFNHRPEFTDPEILRSSLAAVILRMAALKLGNVQDFPFIEAP 537 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 R I DG +LL+ELGA+ ++ +T GRQL++LP+DPR++RM+LE +K GCVRE Sbjct: 538 SSRYIADGYQLLQELGAVDAEQN-----ITDTGRQLARLPLDPRVSRMILEGKKQGCVRE 592 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA- 576 +II SAL+IQDPRERPMDK++A+D+ H +F+ + SDFL F+ LW + + K SN Sbjct: 593 ILIIASALAIQDPRERPMDKREAADQAHAKFNVEHSDFLGFIKLWEWYEDALKTKKSNKD 652 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 C +++L++LR++EW+++Y QLR++ +EL + +N +PA Y ++H ALL GLL +IG Sbjct: 653 LLNKCHSNFLSFLRLKEWRELYQQLREIAEELELKLNEQPASYEQVHRALLAGLLGNIGF 712 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 KD + Y GAR RF I PGS L K PKWVM AEL+ET++L+ R ARI+P+W+EP+A Sbjct: 713 KDGEADNYLGARGIRFHIAPGSTLKKARPKWVMAAELMETTKLYARCVARIEPDWIEPLA 772 Query: 697 QHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVE 756 + L + YS+P W+R V+A E+V++YGL +V R+V+Y I+P RE+FIR AL Sbjct: 773 RGLTQSHYSDPRWDRKAAQVVAWERVSLYGLTVVPRRRVHYGPINPQESREIFIREALAN 832 Query: 757 GDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSW 816 ++ TR FF N KL AE+EELEHK+RR+D+LVD+ TLF FYD I +++ F+ W Sbjct: 833 MEFDTRAPFFAANRKLIAEIEELEHKARRQDVLVDEHTLFAFYDAIIPAGIVNGAGFEKW 892 Query: 817 WKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTV 876 ++ RETP LL + L++ GA ++++ +P +KL L Y+FEPG DGVT Sbjct: 893 RQEAERETPRLLYLTRDHLMRHGAAGVTEVQFPESLELDGVKLPLKYRFEPGHPLDGVTA 952 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE 936 +PL LLNQ+ EW +PG+ RE V ALIK+LPK +RR VP P++ FL + Sbjct: 953 TVPLALLNQLNPVEAEWLVPGMIREKVTALIKALPKTLRRVCVPVPDFVTGFLETATRKD 1012 Query: 937 LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 LL +L +++ TG+ + +W D + HL + FRVVD+KN++L GR LK L Sbjct: 1013 GALLPALASYIQQRTGLKLSASEWQADALDAHLYMNFRVVDEKNRELGSGRDWHALKAQL 1072 Query: 997 KGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 Q T + + GIE++GL W FG LP + R ++ +PAL D DSVAIKLF Sbjct: 1073 GQAAQLTFRSNS-PGIEKAGLKQWDFGDLPPTLSFSRDGRQLTGYPALEDNGDSVAIKLF 1131 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 D L +Q+ G+RRL+ + +K L + LP + L EL +D + Sbjct: 1132 DTELAARQSHRAGVRRLMRFELKEQMKQLEKGLPGFNQYALQLRSIMSPEELREDMLVAI 1191 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 D+ + F AL + R L V + I T + ++L Sbjct: 1192 SDRAFIGEDELPRNSQDFMALKARARTRLPAVVEGAGRLATAIATEYTQLTQKLNA-APA 1250 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 +++ +++ Q+ L+ + F + + L RY++A+ RLEK RD Sbjct: 1251 SLSRVKKELEGQLARLLPKRFFSATPWDTLQHLPRYIKAMRLRLEKYPGAIERD---TRS 1307 Query: 1237 VENVQQAWQQWINKLPPARREDEDVK----EIRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 + VQQ W++W + + R+ +++V + RW+IEELRVS FAQ+L TP+P+S KR+ Sbjct: 1308 GQAVQQIWERWESHVQGLRKANQEVPPAVLDYRWLIEELRVSLFAQELKTPFPVSVKRLD 1367 Query: 1293 QAMEQI 1298 +A E + Sbjct: 1368 KAWEDM 1373 Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 162/253 (64%), Positives = 196/253 (77%), Gaps = 1/253 (0%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKV-KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 LQ +L +L DR RRL V + + + E+A ++ + + LR+ P+ Sbjct: 16 LQAQLPDCLLLDRFHLKRRLQQVGAMLEQGKPVDKLMTELATKVQTSLQRRQLRQEQLPK 75 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 YP LPVS +K +I +AI HQVVIV+GETGSGKTTQLPKIC+ELGRG+ GLIGHTQP Sbjct: 76 PEYPAELPVSARKDEIAQAIAKHQVVIVSGETGSGKTTQLPKICLELGRGVAGLIGHTQP 135 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA+RIA+ELK+ G +GYKVRF+D +S+ T +KLMTDGILLAE Q DR L Sbjct: 136 RRIAARSVASRIAQELKSPLGEAVGYKVRFNDRLSETTYIKLMTDGILLAETQGDRFLNA 195 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+I+TSATID ERFSRHFN AP+IEVS Sbjct: 196 YDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIVTSATIDAERFSRHFNGAPVIEVS 255 Query: 251 GRTYPVEVRYRPI 263 GRTYPVE+RYRP+ Sbjct: 256 GRTYPVEIRYRPL 268 >UniRef50_C8QXF3 ATP-dependent helicase HrpA n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXF3_9DELT Length = 1312 Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/1299 (39%), Positives = 765/1299 (58%), Gaps = 73/1299 (5%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 PE++ P LP++ +++I+ AI H VVI+AGE GSGKTTQ+PK+C+ GRG + IG T Sbjct: 16 PELSCPAELPIADFREEIIAAIISHPVVIIAGEPGSGKTTQIPKMCLAAGRGRQQKIGCT 75 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA ++A R+ +EL +GY++RFSDH S T VK MTDGILLAE Q DR L Sbjct: 76 QPRRIAAISMAARLRDELGPAGEVLVGYRIRFSDHTSRATRVKFMTDGILLAETQHDRQL 135 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 YDTII+DEAHERSLNIDFLLG LKELL RRPDLK+IITSATID E+FSRHF+ AP+I+ Sbjct: 136 ADYDTIIVDEAHERSLNIDFLLGILKELLKRRPDLKVIITSATIDTEKFSRHFDKAPVIQ 195 Query: 249 VSGRTYPVEVRYRPIVE---EADDTERDQLQAIFDAVDE-LSQESHGDILIFMSGEREIR 304 V+GRT+PVEVR++P E EAD E+ + AV E ++ E GDIL+FM ER+IR Sbjct: 196 VAGRTHPVEVRHQPPAETGGEADADEQGYTERAAAAVLEIINHEPPGDILVFMPTERDIR 255 Query: 305 DTADALN--------KLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 +TA+ L I+PLY RLS EQ R+FQ GR+IV+ATNVAETS+T Sbjct: 256 ETAELLEGALGAPAAAGRGGKNTIMPLYGRLSPKEQRRIFQPVKGRKIVIATNVAETSIT 315 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI+YV+D G AR++ Y+ R + +LP+ P+++++ +QR GRCGRV+ G+CIRLY EDD Sbjct: 316 VPGIRYVVDTGLARVAAYNPRARTYKLPVVPVARSACDQRAGRCGRVAPGVCIRLYGEDD 375 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 +L+RP +T PEI+R+NLA VIL+MTAL LGD AAFPFV+ P R I+DG +LL ELGA+ Sbjct: 376 YLNRPLYTPPEIVRSNLAEVILRMTALKLGDPAAFPFVDPPSARAIKDGYQLLAELGAL- 434 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 +L+ GR +S+LP+DP ++RM+LEA+ +RE +I +ALSIQDPR RP D Sbjct: 435 EGPSGGRLQLSRRGRLMSRLPLDPCISRMILEARDQNALREVCVIAAALSIQDPRIRPAD 494 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA-FRRLCRTDYLNYLRVREWQ 595 K++ +D+ HRRF +SDFL ++ LW+ + + S A R+ C++ +L++ R+REWQ Sbjct: 495 KEKEADQVHRRFSVPDSDFLFYLKLWDTMQNVLEQTGSKARLRKFCQSHFLSFQRIREWQ 554 Query: 596 DIYTQL-RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 DIY Q+ R + E G +N E A +H ALL+G L +I K +K Y G I Sbjct: 555 DIYGQIGRILAGEKGFSLNHEAAAADAVHKALLSGNLRNIAQKK-EKNIYQGGGGREVVI 613 Query: 655 FPGSGLFKK--------------------------PPKWVMVAELVETSRLWGRIAARID 688 FPGS L+ + P W+M AELVETSRL+ R A ID Sbjct: 614 FPGSSLYYRGGEGQAKGAKRQGRGAKEGGRPETGPTPGWLMAAELVETSRLYARTVAAID 673 Query: 689 PEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCREL 748 P+W+EP+A+ L++ +YS+PHWE+ +G V+A EK T++GL +VA RKV +++IDPA R + Sbjct: 674 PDWIEPLARPLMRYSYSDPHWEKRRGQVVAKEKGTLFGLVVVAGRKVPFARIDPAEARRI 733 Query: 749 FIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVI 808 FI+ ALVEG+ + + F N +L A++++LE +SRRRD+LV D+ +F+FY+QR+ +V Sbjct: 734 FIQSALVEGELKGNYHFLGHNRQLLADLKDLEERSRRRDLLVADDRIFQFYEQRLPPEVC 793 Query: 809 SARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPG 868 + KK +T L ++ L+ + +P G + L+LSY FEPG Sbjct: 794 DQASLNRLLKKRRGDT--FLQLQREDLLYREPKADLMEQFPTAMQVGQISLQLSYHFEPG 851 Query: 869 ADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAP----NY 924 A+ DG++V IP+ L + FEW +PG+ E + L+K+LPK +RR VP P Sbjct: 852 AEDDGLSVLIPVQLAAHLRPERFEWLVPGMLEEKIFFLLKNLPKNLRRQLVPIPRTAAEL 911 Query: 925 AEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLK 984 AE +++ + + L +L +E+ G+ ++ W +PDHL+ F +V+ ++K L Sbjct: 912 AEKLHEKLQSVNISLYQALGQEIYHRYGLRIEAAAWPIKALPDHLRCRFCLVNQEDKILA 971 Query: 985 EGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQ-----KRGNYKVK 1039 GR+L L VA +I S +LPE ++ G Sbjct: 972 SGRNLSALASGGPPAAPPPDKVVAALRQRWQRQNI-SGAELPEIPQRLPMTGPDGQLIGY 1030 Query: 1040 AWPALV-DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLY 1098 +P L D+R V + LF A GL RL + +K L + L + Sbjct: 1031 LFPGLQEDDRGRVNLHLFTAEKPAHLATCQGLLRLFCREFTARLKGLRKDLTFPRQHWRL 1090 Query: 1099 FNPYGKVLELIDDCISCGVDKLIDANG-GPVWTEEGFAALHEKVRAE--------LNDTV 1149 + LE ++ I V + I A G G + F A EK+R + L + + Sbjct: 1091 AHGVAS-LEELNRAIEQFVLREIFATGSGELIGAAEFQARVEKLRRDGFYQEARRLYELI 1149 Query: 1150 VDIAKQVEQILTAVFNINKRLKG---RVDMTMALGL-----SDIKAQMGGLVYRGFVTGN 1201 + + ++ + L A+ + G RV A GL ++++ ++ L+ F+ + Sbjct: 1150 LLVLQERWETLQAINRLVPPAAGGQSRVGSAAAAGLPAELIAELQQELAELLPPDFLEHH 1209 Query: 1202 GFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDV 1261 L RYL+A++ R ++ DP +D A+ ++ +Q Q++ + + + + Sbjct: 1210 DAASLARLPRYLKALQIRTQRALSDPAKDAAKAARLAAFKQRLQKYPDASELSAGKRSVL 1269 Query: 1262 KEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 E R M+ E ++S FAQ++ T +P+S +R+ + ++ G Sbjct: 1270 AEYRLMLAEYKISLFAQEIKTIFPVSPQRLEEKWREVEG 1308 >UniRef50_A3M3Z2 ATP-dependent helicase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M3Z2_ACIBT Length = 939 Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/916 (48%), Positives = 618/916 (67%), Gaps = 29/916 (3%) Query: 98 VAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYK 157 +AGETGSGKTTQLP+I M GRG+ G+IGHTQPRRLAAR+V+ RIAEE+ + G IG+K Sbjct: 1 MAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARSVSQRIAEEVGEKLGESIGFK 60 Query: 158 VRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL 217 +RF++ S +++V+LMTDGILLAE+ DR L +YDTIIIDEAHERSLNIDF++GYLK+LL Sbjct: 61 IRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIIDEAHERSLNIDFIMGYLKQLL 120 Query: 218 PRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE------------ 265 P+RPDLK+I+TSAT+D RFS +FNNAPI EV GR+YPVEVRYRPI E Sbjct: 121 PKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVEVRYRPISEMNIGGSDDDEFD 180 Query: 266 -EADDTERDQLQAI---FDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEIL 321 ++ R +QA+ F +E H DILIF S E+EIR+ + L K RHTEIL Sbjct: 181 DFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQEIRELQETLQKYGPRHTEIL 240 Query: 322 PLYARLSNSEQNRVFQ-SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 PLYARL+ SEQ ++F S GRRI++ATNVAET+LTVP I+YVID G ARISRY+YR++V Sbjct: 241 PLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNIRYVIDSGFARISRYNYRSRV 300 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQM 440 QRLPIE ISQA+ANQRKGRCGRV+ G+CIRLYSE+DFLSRPEFT+PEI RTNLASVILQM Sbjct: 301 QRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSRPEFTEPEIKRTNLASVILQM 360 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 +LGLG++ F F+E PD R + DG +LL ELGA+ + +LT +G+ ++++P+DP Sbjct: 361 QSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN----ELTKVGQMMARMPIDP 416 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 RLARM++ G ++E +++ SAL++QD RERP DKQ +D+KH F + +SDFL ++ Sbjct: 417 RLARMIVGGAHFGVLKEILVVVSALAVQDARERPADKQMQADQKHALFKEADSDFLFYLK 476 Query: 561 LWNYLGEQQKA-LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY 619 LW+ L + +A +S N R+ + +L++LR+REW+ + QL ++ + L + N +PA Y Sbjct: 477 LWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVELAEGLKLSFNEKPANY 536 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL 679 +H ALLTGLLS I K ++ + R + +FP S L K WVM E+VETS++ Sbjct: 537 ENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKTNTAWVMAFEMVETSQV 596 Query: 680 WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ 739 + R A+IDPEW+ A+ L+K Y EPHW + G V A +++++GL I R VN+ + Sbjct: 597 YLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQISLFGLIIEPKRLVNFEK 656 Query: 740 IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY 799 +D E+F+R AL G+ T F + NL EVE +E K RRRD++VD+ET+++FY Sbjct: 657 VDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFY 716 Query: 800 DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL 859 +I ++ S R F+ W V + P L E L ++ + +P+ H G L+L Sbjct: 717 ASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLN--DRPTTQQFPDHLHNGQLRL 774 Query: 860 RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV 919 +Y+F+P D DG TV IP+ L QV+E+ + W IPG R +L+ AL+K+LPK RRN V Sbjct: 775 ATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEALLKALPKDKRRNLV 834 Query: 920 PAPNYAEAFLGRVKPLEL--PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVD 977 P P+ A + + + L + L LR G + +D+ ++++ +L +V+D Sbjct: 835 PIPDTARKLMQGIDAVHLRQHIFSYLAFALR---GEQITEKDFSFERIDPYLVPFIKVID 891 Query: 978 DKNKKLKEGRSLQDLK 993 +K K + +GR L +LK Sbjct: 892 EKGKLIAKGRDLAELK 907 >UniRef50_Q7USX6 ATP-dependent helicase hrpA n=1 Tax=Rhodopirellula baltica RepID=Q7USX6_RHOBA Length = 1384 Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/1331 (39%), Positives = 756/1331 (56%), Gaps = 124/1331 (9%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 +I YP +LP++ + I++ + ++QV++V GETGSGK+TQLPK+ ++ G G G+IGHTQ Sbjct: 64 KIEYPSDLPITAHRDAIVDLLAENQVLVVCGETGSGKSTQLPKMLLDAGLGEHGMIGHTQ 123 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAAR++A R+AEE +T+ GG IGY+VRF D SD T +KLMTDGILLAE + DR L Sbjct: 124 PRRLAARSIATRLAEETETKLGGAIGYQVRFGDQTSDRTKIKLMTDGILLAETRIDRELR 183 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------ 243 Y IIIDEAHERSLNIDFL+GYL++L+ RRP+LK+IITSATID ERF+ HF Sbjct: 184 NYSAIIIDEAHERSLNIDFLMGYLRQLIDRRPELKVIITSATIDAERFAEHFGTYSEEAA 243 Query: 244 -----------APIIEVSGRTYPVEVRYRPIVE------EADDTERDQLQAIFDAVDELS 286 API++V GR YPVE+RY P + E D D + + +D LS Sbjct: 244 SDPENESNVIPAPILQVEGRGYPVELRYFPWEDIAGEDAEIDGRHYDLSRHVIGGLDSLS 303 Query: 287 QESHGDILIFMSGEREIRD----TADALNKLNLRH-TEILPLYARLSNSEQNRVFQ-SHS 340 ++ GD L+F+ ER+IR+ A ++ L + E+LPLYARL S+Q +F S + Sbjct: 304 RDGSGDTLVFLPTERDIREVSHHVAGHYKRMGLTNRVELLPLYARLPQSQQQAIFHPSGN 363 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 RRI+ ATNVAE+SLTVPGI+YVID GTARISRYS RTKVQRLP+E IS+ASANQR GRC Sbjct: 364 KRRIIFATNVAESSLTVPGIRYVIDSGTARISRYSARTKVQRLPVEAISRASANQRSGRC 423 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GRV GIC+RLYS +DF +R FT PEI RTNLASV+LQ L LG + FP ++ P Sbjct: 424 GRVGPGICVRLYSAEDFETRDAFTTPEIRRTNLASVVLQSKTLRLGRLEEFPLIDPPRAE 483 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 I++G+R L ELGAI D++ LT +G QL +LPVDPR+ R+++ A++ G + E + Sbjct: 484 AIREGMRTLHELGAIDEDKE-----LTEIGWQLGRLPVDPRVGRILIAAKEMGVLPEVLP 538 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 I +A+ DPR+RP +K+ A+DE H F D ESDFL+ + LW + + S R+ Sbjct: 539 IAAAMENPDPRDRPPEKRAAADEAHAAFKDPESDFLSLLRLWRFYDTMRSDHSRGKLTRI 598 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELG-------------------------IPVNSE 615 R ++L+ R+REW D+Y QL+++ +G P ++ Sbjct: 599 LRKNFLSPTRMREWSDVYRQLKEMSASIGENKRRSKNKSLTSRGSVGKIRYAELDPAKAD 658 Query: 616 PAE-------YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWV 668 + Y IH AL+TGLLS I M DK EYTGA + ++PGSG+F+ PKW+ Sbjct: 659 QEQPVVDSDKYALIHQALMTGLLSGIAMA-GDKNEYTGAGGLKLFLWPGSGIFEAKPKWI 717 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLP 728 + AELVET++ + R ARI P W+E VA HL+K +YS+PHW R G ++ +++GLP Sbjct: 718 VAAELVETAKQYARTCARIQPGWIEAVAPHLLKASYSDPHWSRKSGGAFCYQRQSLFGLP 777 Query: 729 IVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 +V R+V + IDPA R+L IRH LVE + T F R N +L +E+L K+RRRD+ Sbjct: 778 VVVRRRVPLAPIDPATSRDLLIRHGLVENELPTTAKFVRHNRRLIESIEKLAAKTRRRDL 837 Query: 789 LVDDETLFEFYDQRISHDVIS---ARHFD------SWWKKVS------------------ 821 +VDD +L FY R+ DV FD +W K++ Sbjct: 838 VVDDYSLLSFYASRLPEDVCDRPRLEKFDRQNPAPAWASKLNDDVALAAWLADPPATDSD 897 Query: 822 ---RETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHI 878 ET L + + + A I+ YP+ + G+ +L L Y F PGA+ DGV + I Sbjct: 898 DEHSETTPYLRPQDILSVDSVA--IAADAYPDEFAAGSSRLPLQYHFRPGAEDDGVHLTI 955 Query: 879 PLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV--KPLE 936 L QV + W +PGL VIA+IKSLPK +RRN VPA + A + + K + Sbjct: 956 HEAALPQVSDDALGWLVPGLLEPKVIAMIKSLPKRLRRNLVPAADVAARVVAEISDKRGQ 1015 Query: 937 LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 +P + +L L R V V D+ +++ HL+ VVDD +++ R + +K L Sbjct: 1016 VPFMPTLCEALTRHAEVRVVESDFQDEKLEPHLQFLVNVVDDTGNVIEKTRGVDAVKAKL 1075 Query: 997 KGK-VQETLSAVADDGIE----QSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSV 1051 + + ++ A A G E + + + LP +KRG +V +P LVD+ DSV Sbjct: 1076 GSRIIDDSEVAAAASGPEADWSREKMTSFDLDVLPREVVRKRGGVQVAQYPGLVDQGDSV 1135 Query: 1052 AIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPY--GKVLEL- 1108 + KLF + + A G+ RL + ++ LP A+ + P V+E Sbjct: 1136 STKLFSDEATAENATRLGMMRLFAIACRKDLRAQVRHLPALAEAKIKLAPIVSSAVIETA 1195 Query: 1109 IDDCISCGVDKLIDANGG---PVWTEEGFAALHEKVRA---ELNDTVVDIAKQVEQILTA 1162 + D I+ L+++ G PV + A E+++ + + DIA + ++ A Sbjct: 1196 LADLIARVA--LVESQPGRKMPVVRKR--AEFDERIQMAPQRIGEATQDIAGWLGKLTDA 1251 Query: 1163 VFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEK 1222 ++ + + M +D+ Q+ LV F+ ++ L RYL AI RL+K Sbjct: 1252 YHSMRCQWEESSSPKMNDVRADVMQQIEWLVADQFIQWTPWQHLQHLPRYLSAIAYRLDK 1311 Query: 1223 LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED--VKEIRWMIEELRVSYFAQQL 1280 + RD ++ + WQ+W++ LP RR+ + E RW+IEELRVS FAQ L Sbjct: 1312 ASSAASRDAEGRQLIDRL---WQRWLSGLPEDRRDPKSQCTSEFRWLIEELRVSQFAQPL 1368 Query: 1281 GTPYPISDKRI 1291 GT +S+KR Sbjct: 1369 GTAVKVSEKRC 1379 >UniRef50_A8ZWI2 ATP-dependent helicase HrpA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWI2_DESOH Length = 1307 Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/1308 (37%), Positives = 742/1308 (56%), Gaps = 35/1308 (2%) Query: 15 RLDSLMLR-DRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAAR----P 69 RL + LR DR RRL + + P + A+ +E+++ I + G V LR A R P Sbjct: 11 RLANQALRVDRQYALRRLSAISGGRRPLSGPALEREVSQLIARLEGSVALR-AFRYDRFP 69 Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 + LP++ ++ +I+ AI+ H VVIV+G TGSGKTTQ+P+ C+ G G G IG TQ Sbjct: 70 RLPSDPALPIAPRQDEIIAAIQKHPVVIVSGATGSGKTTQIPRYCVAAGCGRDGRIGCTQ 129 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AA +VA RIA+EL T G +G+K+RFSD + ++K+MTDGILLAE Q+DR L Sbjct: 130 PRRIAAVSVAARIADELGTASTGLVGHKIRFSDTTAGTHLIKIMTDGILLAEAQRDRYLN 189 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YD I++DEAHERSLNIDF+LG LK++L +R DL+++ITSATID E+FS F+ AP+IEV Sbjct: 190 EYDAIVVDEAHERSLNIDFILGILKQVLAKRDDLRVVITSATIDTEKFSAAFDQAPVIEV 249 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDA-VDELSQES-HGDILIFMSGEREIRDTA 307 SGR YPVE++Y P E + E + A V+ + + S GDIL+FM ++IR+T Sbjct: 250 SGRMYPVEIKYTPPEPEFGNGEPPTYVELAVAEVERVCRRSPFGDILVFMPTAQDIRETC 309 Query: 308 DALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 D + + ++PL+ARLS ++Q RVF GR+I++ATN+AETS+T+PGI+YV+D G Sbjct: 310 DMIEGRRMPGATVMPLFARLSGADQARVFSRPPGRKIIVATNIAETSITIPGIRYVVDTG 369 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427 ARIS Y+ RT+ L + ISQ+S QR GRCGRV G+C+RLY + DF SR FT PE Sbjct: 370 LARISYYNPRTRTTSLSVRSISQSSCQQRAGRCGRVENGVCVRLYDQKDFESRHLFTPPE 429 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 +LR NLA V+L+M AL LG FPFV+ P R+I+DG L ELGAI + Y+LT Sbjct: 430 VLRANLAEVVLRMMALKLGTPDTFPFVDRPADRSIRDGYDTLVELGAIQAVSRG-GYRLT 488 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRR 547 GR ++++P DPRLAR+++EA K+GC+ A+++ SALS+QDPRE P ++ + + H Sbjct: 489 ETGRLMAKIPADPRLARILIEAGKNGCLEPAVVVVSALSMQDPRETPAERLKEARAAHAA 548 Query: 548 FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 F SDF+ +N+W E + + +R CR +L++ R+REW+D+Y Q++Q+ KE Sbjct: 549 FAHPASDFITLLNIW----EACRDKGTGQLKRFCRDHFLSFRRMREWRDLYAQMQQIAKE 604 Query: 608 LGIPVNSEPAE--------YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 G+ + Y H LL+G LS+I K +K Y GA IFPGS Sbjct: 605 HGLGTGLAAIDRHQDPDGFYAAFHRTLLSGYLSNIAEKK-EKNIYNGAGGKTMMIFPGSA 663 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 LF P +M AELVETSRL+ R A ID +W+ P+A L + TY P W R++ V+A Sbjct: 664 LFNTEPSMIMAAELVETSRLYARTVAAIDRQWIRPLAGDLCRETYLAPRWRRSREEVVAD 723 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 + T++GL + V+Y ++DPA ++FIR ALV GD + +F N +L E E+ Sbjct: 724 CRTTLFGLTVDFRESVSYGRVDPAGAADIFIRSALVNGDVKQPLSFMAHNTRLIEEGVEI 783 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E++ RR+ L D+ LF FY QR+ +DV S R K+++ + D L ++ +IKE Sbjct: 784 ENRLRRKTFLAGDDDLFAFYRQRLDNDVYSMRTLK---KRIAEQGVDFLKMSRADVIKEE 840 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 + +P+ H G + Y F+P D DGVTV IP V+ +W +PGL Sbjct: 841 PDPEEMAGFPDTLHLGREQFACLYAFDPAKDEDGVTVRIPAHRAPDVDPDHLDWLVPGLL 900 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRED 959 E + AL+K LPK R+ VP E + + PL+ +L +R+ GV V Sbjct: 901 TEKIAALVKGLPKAYRKQLVPISRTVEIITTEMPQRKRPLVSALSLFIRKRFGVEVPASA 960 Query: 960 WHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHI 1019 W +++P+HL + D++N++++ R+ L+ + + A E++G Sbjct: 961 WQPEKLPEHLHARIAITDERNREIEVSRNRDILRQSFDQGLPADSLAPLKRQWEKTGCRT 1020 Query: 1020 WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIP 1079 W FG LPE G ++ +P LVD V ++LF++ + A G++RLLLL + Sbjct: 1021 WEFGDLPEEIVADAGKRHIRLFPGLVDRTGHVDLRLFESRSKALAAHVQGVKRLLLLALS 1080 Query: 1080 SPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHE 1139 +++L + + L G L D L+ + + T F AL Sbjct: 1081 REVRFLGRDVALSKQAALKAVLLGGAKSLEQRMQQKVADNLLAVS---IRTAAEFEALAI 1137 Query: 1140 KVRAELNDTVVDIAKQVEQILTAVFNINKRLKG-----RVDMTMALGLSDIKAQMGGLVY 1194 +V L + + VE ++ A + ++++ R AL L I+A + LV Sbjct: 1138 EVPGRLYERAHQLRTAVETVVGAYHDARRQIQTLVASQRAGGDTALVLKTIEADLATLVP 1197 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPA 1254 FVT L RY+QA R + + DR + KV + + +L P Sbjct: 1198 ETFVTIYHIADLERLPRYMQAAVIRARRAVENLAGDRQKAEKVAWSCAVLDRLVAELLPD 1257 Query: 1255 RREDE--DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 +++ V++ WM+EE +VS FAQ+L T +P+S KR+ + + +I G Sbjct: 1258 TSDEKRRAVEDFFWMVEEYKVSVFAQELKTAFPVSKKRLEENLREIEG 1305 >UniRef50_Q1NTJ0 ATP-dependent helicase HrpA n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NTJ0_9DELT Length = 1307 Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/947 (46%), Positives = 611/947 (64%), Gaps = 25/947 (2%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +T P LP++ +++I+ I VVI+AGE GSGKTTQ+PK C+ GRG + IG TQP Sbjct: 14 LTVPAELPIAAWQEEIVGQISASPVVIIAGEPGSGKTTQIPKFCLLAGRGRRQKIGCTQP 73 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAA +A R+ EL + +G++VRFSD T VK MTDGILLAE+Q+D L Sbjct: 74 RRLAAVAMAERLGVELGSSGSSLVGHRVRFSDRTDRATRVKFMTDGILLAEVQRDGELRD 133 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTII+DEAHER+LNIDFLLG LK+LL RR DLK+IITSATID +FSRHF++AP+IEVS Sbjct: 134 YDTIIVDEAHERTLNIDFLLGILKDLLARRDDLKVIITSATIDTAKFSRHFSDAPVIEVS 193 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDE-LSQESHGDILIFMSGEREIRDTADA 309 GR +PVE+RY+P EE + + ++ AV+E L+ + GDIL+FM ER+IR+TA+ Sbjct: 194 GRAHPVEIRYQPWDEE-NGEDPGHVERAAAAVEEILTTSTAGDILVFMPTERDIRETAEL 252 Query: 310 LN-----KLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVI 364 +N + +LPLY RLS +EQ R+F+ +GR++V+ATNVAETS+TVPGI+YV+ Sbjct: 253 INSQPAGRRRGGKAVVLPLYGRLSPAEQARIFRPVAGRKVVVATNVAETSITVPGIRYVV 312 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G ARI+ Y+ R + +LP+ P++++S +QR GRCGRV GICIRLY E+D+L+RP +T Sbjct: 313 DSGLARIAAYNPRARTHKLPVVPVARSSCDQRAGRCGRVGPGICIRLYREEDYLNRPLYT 372 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI+R+NLA VIL+M AL LG AFPFV+ P R I DG +LL ELGA+ + + Sbjct: 373 PPEIVRSNLAEVILRMVALKLGRPDAFPFVDPPSSRAISDGYQLLTELGAVAPEPRRGRQ 432 Query: 485 K------LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 K LTP GR +++LP+DP ++RM++EA+++ + E +I +ALSIQDPR RP DK+ Sbjct: 433 KGRPPLQLTPRGRLMARLPLDPCISRMIIEARENNALSEVCVIAAALSIQDPRLRPADKE 492 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS-NAFRRLCRTDYLNYLRVREWQDI 597 + +DE H RF SDFL +V LW E + S R+ C +L++ R+REWQDI Sbjct: 493 KEADEVHGRFAVPGSDFLFYVRLWETSREVLRQTGSLGRLRKFCAGHFLSFQRLREWQDI 552 Query: 598 YTQLRQVVK-ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + Q+ +++K E G N PAE +H ALL+G L +I MK +KQ Y G + IFP Sbjct: 553 HEQILRILKAERGFSFNRTPAEPAAVHRALLSGNLRNIAMKK-EKQHYQGGGGRQLMIFP 611 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GS LF KPP W+M AELVET RL+ R A I+PEWVEP+A L++ +Y PHWE+ +G Sbjct: 612 GSSLFGKPPPWIMAAELVETGRLYARTVAAIEPEWVEPLAGDLMRYSYGNPHWEKRRGQA 671 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 +A E+ T++GLP+V RKV +++D A R LFI+ AL+EG+ + + F R N +L ++ Sbjct: 672 VALERGTIFGLPVVTGRKVPLARVDAAEARRLFIQQALIEGEMRGDYDFLRANRELVQQL 731 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI 836 ELE +SRRRD+LVD+E +F FYD+R+ +V + KK + D L + L+ Sbjct: 732 AELEERSRRRDLLVDEEEIFNFYDRRLPAEVCDQAGLNRLLKK--QRGDDFLRLRREDLL 789 Query: 837 KEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIP 896 + +P G L+L LSY+FEPGA DG+TV +P+ L + FEW +P Sbjct: 790 SRPPDDDLPEKFPARLPIGELELALSYRFEPGAADDGLTVQVPIRLAGHLRPEPFEWLVP 849 Query: 897 GLRRELVIALIKSLPKPVRRNFVPAPNYA----EAFLGRVKPLELP---LLDSLERELRR 949 G+ E + L+K+LPK +RR VP P A A L R P L ++ RE+ Sbjct: 850 GMLEEKIFVLLKNLPKNLRRPLVPIPQTAAELTRALLRRGATTSGPVESLYQAMGREIYD 909 Query: 950 MTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 G+ + W +P+HL+ F ++ D ++L GR L L+ L Sbjct: 910 SYGLRIAGSAWPLAALPEHLRCRFSLLADDGRELAAGRELAALQSNL 956 Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 3/118 (2%) Query: 1182 LSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQ 1241 +++ + ++ LV F + L RYL+ + R+E+ P R+ A+ ++ + Sbjct: 1184 VANFRQRLAELVEPDFPAHCRAEELSRLARYLKGLAVRVERAYAVPARESAKAAQLAPFK 1243 Query: 1242 QAWQQWINKLP-PARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + + PA+RE + E R M+ + +S FAQ++GT +PIS +R+ + +I Sbjct: 1244 RRLADYPQAAASPAQREL--LAEYRRMLADYEISLFAQEIGTEFPISPQRLEEKWREI 1299 >UniRef50_Q12AX3 ATP-dependent helicase HrpA n=1 Tax=Polaromonas sp. JS666 RepID=Q12AX3_POLSJ Length = 1402 Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/1154 (40%), Positives = 673/1154 (58%), Gaps = 110/1154 (9%) Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGER 301 AP+I VSGR +PVE RYRP E D D AI D VDEL Q H GDIL+F+ GER Sbjct: 262 APVIMVSGRMFPVEQRYRPFEESRDYDLND---AIADGVDELWQNPHSAGDILVFLPGER 318 Query: 302 EIRDTADALNKLN-----LRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 EIR+ AD L K R+ E+LPL+ARLS +EQ+R+F H+GRRIVLATNVAETSLT Sbjct: 319 EIREAADHLRKHLAHQPLTRNAEVLPLFARLSQAEQDRIFDGHTGRRIVLATNVAETSLT 378 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI+YVID GTAR+ RYS+R+KV++L +EP+SQA+ANQR GRCGRV++GICIRLY E D Sbjct: 379 VPGIRYVIDAGTARVKRYSFRSKVEQLMVEPVSQAAANQRAGRCGRVADGICIRLYDEQD 438 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F+ R FTDPEILR++LA+VIL+M AL LG + F F+E P +R I DG +LL ELGA+ Sbjct: 439 FVGRSRFTDPEILRSSLAAVILRMKALHLGAVEDFAFIEPPQRRAIADGYQLLAELGAVD 498 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 D + LTP+GR L++LP+DPR+ RM+LEA+ + E ++I SALS+QD R+RPMD Sbjct: 499 DDNE-----LTPVGRTLAKLPLDPRVGRMILEAKDRQALDEVLVIASALSVQDVRDRPMD 553 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKA------------------------- 571 +Q +D+ H +F D++S+F ++ LW +LG+ + Sbjct: 554 RQAQADQAHAKFDDEKSEFSGYLKLWKWLGDSRGGRPSPQPSPKGRGGKTELLPLPLGEG 613 Query: 572 ---------LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREI 622 +S+ + L R +Y+N RVREW+DI++QL VV E G +N PA Y ++ Sbjct: 614 RGEGSPVHKISNRQYETLLRENYVNVRRVREWRDIHSQLHSVVGEQGWHLNERPASYEQL 673 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 H+++L GLL +IG K ++ Y GAR RF PG+ L KKP +W++ AELVET+RL+GR Sbjct: 674 HLSMLCGLLGNIGCKSDEEDWYLGARGIRFYRHPGAKLSKKPGRWIVAAELVETTRLFGR 733 Query: 683 IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDP 742 A I+P+W+E VA HL+K+ +PHWE+ V A E+ T+YGL + R+VN+ ++DP Sbjct: 734 GIANIEPQWIEQVAGHLLKKQLLDPHWEKKAAQVTALERATLYGLVVYNGRRVNFGRVDP 793 Query: 743 ALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQR 802 RE+FIR ALV G+W T+ F NL+L +V++LEHK+RR+D+LVD+E ++ FYDQ+ Sbjct: 794 VSAREIFIREALVAGNWDTKLTFLAANLRLVQQVQDLEHKARRQDVLVDEELIYAFYDQQ 853 Query: 803 ISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLS 862 + DV S +SW+K ++ P LL + L++ A I+ +P G + ++ Sbjct: 854 LPADVCSGASCESWYKDEVKKQPKLLLLTREELMRHEAAGITTQAFPKTLRLGGVDCMVT 913 Query: 863 YQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAP 922 Y EPG DGVTV +PL LNQV E EW +PG+ ++ V ALIK+L + R VP P Sbjct: 914 YLHEPGDPKDGVTVDVPLFALNQVNEERCEWLVPGMLKDKVQALIKTLHQRPRSRLVPLP 973 Query: 923 NYAEAFLGRVKPLEL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDD 978 A G++ E+ L D++ + +R T + + R D D +P HL + FRV+D+ Sbjct: 974 ETAARMAGQLLQPEVFGSGSLTDAILKLVRDATSLDIKRADMKLDMLPAHLFMNFRVIDE 1033 Query: 979 KNKKLKEGRSLQDLKDALKGKVQETLSAVAD----------------------------- 1009 ++L GR+L LK L + + A+A Sbjct: 1034 HGRQLGAGRNLGALKGELGPQARGAFQALAGLKNLARPAASAPNEESDRPSAQVPTGQAA 1093 Query: 1010 -----DGIEQSGLH---------IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKL 1055 G QS H WSFG+LPE E ++G+ + +PAL+D D+V I++ Sbjct: 1094 IKNVAKGSTQSESHPVKVAERYTSWSFGELPELMEIRKGSQTLIGFPALIDLGDAVTIEV 1153 Query: 1056 FDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF--------NPYGKVL- 1106 FD P GLRRL L I +KYL + LP+ K+ + N G L Sbjct: 1154 FDEPDLAAVKHRAGLRRLFSLQIKDALKYLEKNLPDLQKMATAYMLVGRAADNSGGGTLE 1213 Query: 1107 ELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNI 1166 EL I +D+ + P E F + R L ++A+ ILT Sbjct: 1214 ELRAQIIEVALDRAFLLDPLPT-GEADFKRRVDDGRGRLTLIASEVARLAAGILTEYAVA 1272 Query: 1167 NKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVD 1226 +++K + A ++D Q+ L+ + F+T + +L +RYL+AI RLEK D Sbjct: 1273 QRKIKDTKNAAEA--VADASQQLQRLMPKRFLTTTPYPQLQHFVRYLKAITLRLEKWRAD 1330 Query: 1227 PHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPI 1286 P RD A++ ++ +Q + + + + A D ++E RW++EELRVS+FAQ+L TP P+ Sbjct: 1331 PARDAARLAELRPQEQRYWRLVAERKGA--TDARMQEFRWLLEELRVSFFAQELRTPQPV 1388 Query: 1287 SDKRILQAMEQISG 1300 S KR+ +A +Q++G Sbjct: 1389 SVKRLDKAWQQLNG 1402 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 126/193 (65%), Positives = 149/193 (77%), Gaps = 11/193 (5%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-------KG 123 IT+P++LPVS K+ DI A++ HQV+IV GETGSGKTTQLPKI + +GRG Sbjct: 23 ITFPESLPVSGKRDDITAALQAHQVIIVCGETGSGKTTQLPKIALAMGRGKLNYPAGQGK 82 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRR+AA +VA RIAEELKT G +GYKVRF D +S + VKLMTDGILLAE Q Sbjct: 83 LIGHTQPRRIAASSVAKRIAEELKTPLGEVVGYKVRFQDRLSRDASVKLMTDGILLAETQ 142 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-N 242 D LL YDT+IIDEAHERSLNIDFLLGYL++LLPRRPDLK+IITSATID +RF+ +F + Sbjct: 143 TDPLLRAYDTLIIDEAHERSLNIDFLLGYLRQLLPRRPDLKVIITSATIDAQRFADYFAS 202 Query: 243 NAPIIEVSGRTYP 255 +AP GR P Sbjct: 203 SAP---APGRPKP 212 >UniRef50_B3DQA9 HrpA-like helicase n=21 Tax=Bifidobacteriaceae RepID=B3DQA9_BIFLD Length = 1378 Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/987 (45%), Positives = 608/987 (61%), Gaps = 133/987 (13%) Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPR 131 YP LPVS + +I A++ QVVIV+G+TGSGKTTQLPKI +ELGRG G I HTQPR Sbjct: 5 YPAELPVSAARDEIASAVKRSQVVIVSGQTGSGKTTQLPKILLELGRGTHGKQIVHTQPR 64 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R+AARTVA RIA E+ + G +GY+VRF+D S +T ++++TDGILLA+IQ+D L +Y Sbjct: 65 RIAARTVAERIASEMGVKLGDEVGYQVRFTDESSPSTRLRVVTDGILLAQIQRDPKLTRY 124 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA-----PI 246 DTIIIDEAHERSLNIDFLLGYL LLP+R DLK+IITSATID +F HF +A P+ Sbjct: 125 DTIIIDEAHERSLNIDFLLGYLTALLPQRRDLKLIITSATIDSVKFQEHFEHALHEKVPV 184 Query: 247 IEVSGRTYPVEVRYRPI------------------------------------------- 263 IEVSGRT+PV+V Y P+ Sbjct: 185 IEVSGRTFPVQVVYEPLGTAPALMREVPGFAVGARPGDADYDELASAIAESDSDRPRGRS 244 Query: 264 -VEEADDTERDQLQAIFDAVDEL---SQESHG--DILIFMSGEREIRDTADALNKL---- 313 ADD D A+ A EL S G DIL+F SGER+I + AL Sbjct: 245 GASYADDGITDMPTAVARACAELVIHSSHERGPRDILVFASGERDIHEFEAALRHHYGPR 304 Query: 314 --NLRH---TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGT 368 ++R EI+PL+ARLS ++Q++VF+SH +RIV+ATNVAETSLTVPGI+YV+DPG+ Sbjct: 305 ADDMRRPDAIEIMPLFARLSAADQHKVFESHLHQRIVIATNVAETSLTVPGIRYVVDPGS 364 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 ARISRYS KVQRLPIEPISQASA+QR GRCGRV++GI IRLYS +D+ +RP FT+PEI Sbjct: 365 ARISRYSKTAKVQRLPIEPISQASADQRSGRCGRVADGIAIRLYSREDYETRPRFTEPEI 424 Query: 429 LRTNLASVILQMTALGLG----DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 LRT+L +V+L M ++G+ D+ F F++ PD + + DG L EL AI + Sbjct: 425 LRTSLGAVVLHMLSVGVARTAEDVTNFGFIDPPDMKAVSDGFNELTELKAI--GRKRGEV 482 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGC---VREAMIITSALSIQDPRERPMDKQQAS 541 LT GRQL+++P+D RL RMV+EA K G + + +++ + LS+QDPRERP DK++ + Sbjct: 483 TLTHTGRQLARIPIDVRLGRMVIEAAKTGSPNLLAQVLVVVAFLSLQDPRERPDDKREDA 542 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 D H R+ D+ SDFL +N+W+ + + S+NA RR+C+T+Y ++LR+R+W+D+ +QL Sbjct: 543 DRIHNRYADETSDFLTALNIWDRVFQADGDPSNNALRRICKTEYFSWLRMRQWKDLVSQL 602 Query: 602 RQVVKELG------------------IPVNSEPA-------EYREIHIALLTGLLSHIG- 635 RQ+ KEL +P+N + A + IH ++L GLLS +G Sbjct: 603 RQMCKELKFKVGDPLPASRPGLEIRQLPLNQQAAHSLCCAWDADGIHKSMLAGLLSMMGM 662 Query: 636 ----------------------MKDADKQ---EYTGARNARFSIFPGSGLFKKPPKWVMV 670 MK A KQ +Y GAR RF++FP S + KK P WVM Sbjct: 663 QVVREPKASDFAGLTGSARARAMKRAQKQSKNDYQGARGTRFALFPASAVAKKTPSWVMS 722 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIV 730 ELVETSRLW R +A IDP W EP+A L + TY+EPHW ++G+ +AT +V +YGLPIV Sbjct: 723 TELVETSRLWARYSAAIDPAWAEPLAGQLTRTTYAEPHWSGSRGSAVATARVLLYGLPIV 782 Query: 731 AARKVNYSQIDPALCRELFIRHALVEGDWQTRHA---FFRENLKLRAEVEELEHKSRRRD 787 R V + +I+P R+ IR LVEGD Q R + F +N + + + ++R+ Sbjct: 783 QDRAVQWGRINPLEARDFLIRQGLVEGDIQQRFSYDDFVGKNRDILEDAADDASRTRQLA 842 Query: 788 ILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK-EGAEKISKL 846 V DE LF+FY+ I +DV S WWK P+LL+F+ + + + ++ +S Sbjct: 843 DTVSDEDLFDFYNAVIPNDVTSVSDLAKWWKSEHDRQPNLLDFDPAKVERLASSDSVSLD 902 Query: 847 DYPNFWHQGN-----LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRE 901 DYP+ WH + LRLSY ++P ADGVTVH+PL L+++ F W +PGL E Sbjct: 903 DYPDHWHTTGSDGQPIDLRLSYVYDPADPADGVTVHVPLKALSRITPDQFTWNVPGLLDE 962 Query: 902 LVIALIKSLPKPVRRNFVPAPNYAEAF 928 L++++IK+LPK +R FVPAP+ A A Sbjct: 963 LILSMIKALPKQLRVQFVPAPDAARAI 989 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 11/236 (4%) Query: 1066 MWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANG 1125 +W G L L P + + + L L PY +L++D V +L+ N Sbjct: 1147 LWRGALDALRL----PAERISSRWLGTEALMLASAPYKSTKDLVEDLQLATVKRLM-PNV 1201 Query: 1126 GPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDI 1185 + +E A VR DTV +A V +L A ++K G+ D+ M L I Sbjct: 1202 DRLSDDEALANAVLDVREVYEDTVYQVAHDVIAVLKAYAEVDKATGGKADLPMLSVLQSI 1261 Query: 1186 KAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQ 1245 + + LVY GF+ L RYL+A RL K D +RD + + +Q Sbjct: 1262 RDHIATLVYPGFIGRTPPDALKSLSRYLRADLSRLNKAKTDKNRDVKWAWQADEARQVVD 1321 Query: 1246 QWI--NKLPPARREDE----DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 + + K PA + E ++ RWM+EE VS +AQ+LGT P S RI +A+ Sbjct: 1322 KALARAKAEPAGPKHEALMKQAEQARWMLEEFYVSLWAQELGTKGPASLNRIKKAL 1377 >UniRef50_Q6AL39 Related to ATP-dependent helicase HrpA n=1 Tax=Desulfotalea psychrophila RepID=Q6AL39_DESPS Length = 1257 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/1263 (37%), Positives = 744/1263 (58%), Gaps = 80/1263 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K +I+ AI+++QV+++AG+TGSGKTT+LP+ C+E+ + K L+G TQPRRLAA Sbjct: 20 LPIDKHKDEIITAIKENQVIVIAGDTGSGKTTRLPQYCLEVAQEGK-LVGCTQPRRLAAV 78 Query: 137 TVANRIAEEL-KTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VA R+ EE+ ++E +GYK+RF D+ + T +K MTDG+LLAE + DR L +Y +I Sbjct: 79 SVAARVGEEVGRSEE---VGYKIRFHDYTTAKTKIKFMTDGVLLAETKSDRDLRKYSILI 135 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHER+LNIDFLLGYLK LLPRRPDLK+IITSATID F++HFNNAP+I + GRT+P Sbjct: 136 VDEAHERNLNIDFLLGYLKRLLPRRPDLKLIITSATIDTASFAKHFNNAPLISIEGRTFP 195 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN 314 +++RY PI +E + D L+ V +L +E D LIF+ E++IR+ + L K + Sbjct: 196 IDLRYAPIADE----DEDYLEHCTGVVSQLFLRERPADTLIFLPTEKDIRNCCEMLAK-H 250 Query: 315 LRHTEILPLYARLSNSEQNRVFQ-SHSGR--RIVLATNVAETSLTVPGIKYVIDPGTARI 371 + + EILPL+ RL S+Q R+FQ G+ +IV+ATNVAETS+TVPGI+YVID G AR+ Sbjct: 251 IPNVEILPLFGRLQGSDQRRIFQPCPQGKIAKIVVATNVAETSITVPGIRYVIDSGLARM 310 Query: 372 SRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRT 431 + YS R+K LPI+ IS+AS +QRKGRCGRVS G CIRL++E+D+L R EFT PEI R+ Sbjct: 311 TYYSVRSKTTSLPIQKISRASCDQRKGRCGRVSSGTCIRLFAEEDYLGRDEFTLPEIKRS 370 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491 NLA V+LQM++L LGD FPFV+ P I+DG LL+ELGAI Y+LT G+ Sbjct: 371 NLAEVLLQMSSLKLGDPNKFPFVDPPATSTIRDGYALLQELGAI------KGYELTLRGK 424 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 ++ LP+DP ++R+++EA + C+RE MII +ALS+QDPR RP +K++ +D+ H+RF K Sbjct: 425 IMADLPIDPCISRILIEASSNSCLRETMIIAAALSVQDPRIRPAEKEKEADQVHQRFAHK 484 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG-I 610 SDF+A +N+WN E+++ S + ++ C++++L++ R+REW D++ QL ++VK Sbjct: 485 HSDFMALLNIWNSFHEEEEKKSWSRLKKFCKSNFLSFQRMREWLDLHEQLCRIVKRYKEF 544 Query: 611 PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMV 670 N Y +IH ++L G L +I +K +K+ Y GA N +FPGS LF+ +W+M Sbjct: 545 SFNENDGSYEQIHRSILAGFLRNIALK-KEKKIYMGAGNRELMVFPGSHLFQSAGQWIMA 603 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIV 730 A ++T+RL+ A I+ +W+EP+A+ L + +++ P WE+ G V+A EKVT++GL ++ Sbjct: 604 AGFLDTNRLYALTVATIEVDWIEPLAKSLCRYSWANPRWEKKTGQVIADEKVTLFGLVLL 663 Query: 731 AARKVNYSQIDP---ALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRD 787 A+R+VN+ + D A R +FI AL+ GD ++ F + NL L ++ +E E + R+RD Sbjct: 664 ASRRVNFGKRDKKNRAEARRIFIESALLSGDLWGKYPFLKNNLTLVSQWQETEERLRKRD 723 Query: 788 ILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLD 847 I+ D L +FY R+ DV + + K+ E L + +++ E D Sbjct: 724 IVYSDTALHQFYQDRLGEDVYDRTSLEKFLKQT--EDKKALFMTEQDILRRTPETSEYAD 781 Query: 848 YPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALI 907 +P G+L L+LSY F+P + DG+TVHIP+ L + + F+W +PG +E + L+ Sbjct: 782 FPTTIQIGSLSLKLSYTFDPRGNRDGLTVHIPVDLADTISPGRFDWLVPGFLKEKITFLL 841 Query: 908 KSLPKPVRRNFVPAPNYAEAFLGRVKP-LELP---LLDSLERELRRMTGVTVDREDWHWD 963 K LPK +R+ VP + + + + + P +L LE + ++ + R DW Sbjct: 842 KGLPKSLRKKLVPINSSVDRIMDDISTKAQSPSGNMLSCLESSILKLYRFNLQRSDWP-Q 900 Query: 964 QVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL--KGKV-QETLSAVADDGI---EQSGL 1017 ++P HL F + D K++ G +L+ + KG + QE S D I + G Sbjct: 901 ELPHHLTPYFVLEADSGKEVCSGNNLKQMLTGTPNKGAISQEQFSLKKDAQIIVDKWKGW 960 Query: 1018 H--IWSFGQLPESYE--QKRGNYKVKAWPAL--VDERDSVAIKLFDNPLEQKQAMWNGLR 1071 W+F QLP S K+G+ + L +++R V + N E Q GL Sbjct: 961 EGDSWAFDQLPASIPLYNKQGSISGFLFTVLDPIEQRSKVQVNFTRNKQEALQRNQKGLS 1020 Query: 1072 RLLLLNIPSPIKYLHEKLPNKAKLGL---YFNPYGKVLELIDDCISCGVDKLIDANGGPV 1128 L L +K L + + Y E D + + + D + + Sbjct: 1021 YLYQLQFKGQLKPLRKSCSSALSAPSSLWLVKNYSDRKEASDHLLQFILQGIFDLSEATL 1080 Query: 1129 WTEEGFAALHEKVRA-----ELNDTVVDIA------KQVEQILTAVFNINKRLKGRVDMT 1177 +E FA + +V+ N DIA ++ ++L VF + ++ + T Sbjct: 1081 PGKESFAKVIGEVQKMGLLQRGNLICQDIAEIFRLRRETAELLEKVF-LTRKNANKEKET 1139 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRD--RAQML 1235 +L + +I + + F+ L R ++++ RLE+ + +P +D + +L Sbjct: 1140 FSLLIEEI-------LPKTFLQEKEID-LNSCRRQFRSLQVRLERFSANPVKDGQKNALL 1191 Query: 1236 --KVENVQQAWQQWINKLPPARREDEDVK---EIRWMIEELRVSYFAQQLGTPYPISDKR 1290 ++N++ A ++ KL DE + + + M++E R+S F+ ++ T P+SDK+ Sbjct: 1192 APHLKNIEVA-EKTREKL-----SDEACQLLDQYKKMVQEFRISVFSPEIKTQMPVSDKK 1245 Query: 1291 ILQ 1293 +LQ Sbjct: 1246 LLQ 1248 >UniRef50_B2UQA6 ATP-dependent helicase HrpA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UQA6_AKKM8 Length = 1231 Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/1258 (40%), Positives = 729/1258 (57%), Gaps = 60/1258 (4%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 ITYPD LP+S+++ DIL A+R+HQV++V GETGSGKTTQLPK+ MEL +G +G TQP Sbjct: 3 ITYPD-LPISRRRNDILAAMREHQVIVVVGETGSGKTTQLPKMAMELAGEARGRVGCTQP 61 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAA +V+ R+AEEL + GG +GY+VRF + +T +K MTDGILLAE Q D L Q Sbjct: 62 RRLAAASVSRRVAEELNCDLGGLVGYQVRFEEKAGLDTRLKFMTDGILLAETQHDPDLRQ 121 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y T+I+DEAHERSLNIDFLLGYL+ LL RR DL+++I+SAT+D FS F APII+V Sbjct: 122 YHTLILDEAHERSLNIDFLLGYLRLLLGRRRDLRLVISSATLDAGGFSEFFGGAPIIQVE 181 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL 310 GRTYPV+ Y P + + ++ +A+ D +D L + GD+L+F+ GEREIR+ A+ L Sbjct: 182 GRTYPVDFHYLPPLHDDEELPAHVARAV-DWLDTL--DDRGDVLVFLPGEREIREVAEKL 238 Query: 311 NKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVIDPGTA 369 NLR+T ILPL+ARL + Q R+F G RRIVLATNVAETSLT+PGI YVID G A Sbjct: 239 EGRNLRNTRILPLFARLGLANQQRIFHPEQGYRRIVLATNVAETSLTIPGIIYVIDSGLA 298 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 R+SRYS +VQRL IEP+S+ASA QR GRCGRV EG+CIRLYSE D+ RP+FTDPEI Sbjct: 299 RVSRYSPARQVQRLQIEPVSKASARQRAGRCGRVCEGVCIRLYSEKDWEDRPDFTDPEIR 358 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 R+ LA +L+M LGL ++ FP + P + + +G R L E+GA+ A +LTP+ Sbjct: 359 RSALAGALLRMKDLGLPEMPEFPLPDPPSSKLVTEGYRTLREIGALD-----KARQLTPV 413 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GR+L++LP+DPRLARM+LEAQ + E ++I + L I DPRERP D Q +D+ H ++ Sbjct: 414 GRKLARLPIDPRLARMLLEAQHEQALPEMLVIVAGLGIMDPRERPADAAQKADQAHAQWK 473 Query: 550 DKESDFLAFVNLWN--YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 +++SDFL+ + LW + + + N R+ C ++LN+ R+ EW +++ L ++V+E Sbjct: 474 EEDSDFLSLLKLWKAAWQFREGRRWRKNQLRKWCGKNFLNFNRMMEWFNLWEDLSRLVRE 533 Query: 608 LG----IPVNSEP---AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 P+ E A + IH ++L G+ G+ DAD +EY GA F IFPGSGL Sbjct: 534 TLKCRISPLEEETERQASFAMIHRSILAGVPRQFGLWDADNREYRGAGGRSFGIFPGSGL 593 Query: 661 F--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 F KK +WVM ELV+T+RLW R A+ ++P WVE VA HL + YS W+R QGAV A Sbjct: 594 FRRKKRSEWVMGVELVDTTRLWMRRASILEPGWVELVAPHLCESHYSGARWDREQGAVYA 653 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 E+V GL I+ R+V+Y +I+PA RE+ IR L+ G ++T+ A R LR EV + Sbjct: 654 VERVVCGGLRIIDNRRVHYGRINPAHAREIMIREGLLGGGFRTKPACIRHLETLREEVRQ 713 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 +E K RR D + +E +FEF+++ + D +AR F W + ++ P+ L+ + E Sbjct: 714 IELKLRRPDQVWCEEGVFEFFNRLVPPDCCTARAFLRWAAGMEKKNPEALHVPPQEAMYE 773 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 K +P+ + + YQ +PGA+ DGVT+ + + L + E EW +PG Sbjct: 774 FWGKDLLDGFPDEITCKGAEYAVYYQNDPGAEDDGVTLGVHIDQLPDIPEWLPEWGVPGH 833 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL--PLLDSLERELRRMTGVTVD 956 + L++SLPK +R P A F LE PL L + TG Sbjct: 834 LAQRAECLLRSLPKDLRVFLQPISQKAAYFAELRHGLEPDGPLAGKLAEFVEVETGKFCA 893 Query: 957 REDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSG 1016 + +++P L V DD+ ++L G + +L + L K+ A+D + +G Sbjct: 894 PSFFDMNRLPAELVTKIWVCDDEGEELAMGTDVAELNNRLGKKLSRRFQETAEDIVSVTG 953 Query: 1017 LHIWSFGQLPESYE-QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 + WS G L + + R Y ALVDE SV +++F++ L+ ++ G R + Sbjct: 954 MKEWSCGDLEYTVDVAGRPGYV-----ALVDEGASVGVRVFEDELDAAESHREGCLRFMR 1008 Query: 1076 LNIPSPIKYLHEKLPNK--AKLGLYF---NPYGKVLELIDDCISCGVDKLIDANGGPVWT 1130 L + +L K P K KL L+ P +L+D + + + T Sbjct: 1009 LRQTDQLNHLRRKFPLKLEGKLSLHMLGREPSTNAEDLVDVAAEIAMGRPLPR------T 1062 Query: 1131 EEGFAALHEKVRAELND---TVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKA 1187 E FAA +R L D V DI + V AV + KG V T + +D++ Sbjct: 1063 AEQFAAAEMNLRQNLFDAAHNVADIWELVAGTEHAVRDFTALQKG-VRHTERI-TADLQR 1120 Query: 1188 QMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDP-HRDRAQMLKVENVQQAWQQ 1246 Q+ L+ F+ +G +RL D RY+Q I +R+ ++ P R+ ++ E V W Q Sbjct: 1121 QLDWLLRPRFLWAHGAERLPDLKRYMQGIAERIRRIGQQPLARELERLDLFERVYFPWHQ 1180 Query: 1247 WINKLPPARREDEDVKEIRWM-----IEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + E ++RWM +EE R++ FA + +S+KR++ + E +S Sbjct: 1181 VLK---------EHAGDLRWMQYGYLLEEYRLAVFAPAISVKGRVSEKRLVASFEALS 1229 >UniRef50_Q0RE57 ATP dependent RNA helicase n=10 Tax=Bacteria RepID=Q0RE57_FRAAA Length = 1549 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/710 (52%), Positives = 482/710 (67%), Gaps = 30/710 (4%) Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF------------------ 661 R +H ALLTGLLSHIG D +++EY GAR +RF ++PGS + Sbjct: 841 RAVHRALLTGLLSHIGRYDPERREYAGARGSRFMLWPGSAMARGRGRADRAAAADAAIDA 900 Query: 662 ----------KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 PP WVM AELVETSRLWGR AARIDP+W+EP+A HL+ R+YSEP W R Sbjct: 901 TGPDAPRQRPSGPPAWVMAAELVETSRLWGRTAARIDPDWIEPLAGHLVHRSYSEPRWSR 960 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLK 771 QGAV+A E+VT+YG+PIVA R V YS+IDPALCRELFIRHALVEGDWQTRH FF+ N + Sbjct: 961 RQGAVLADERVTLYGVPIVAGRPVQYSRIDPALCRELFIRHALVEGDWQTRHEFFQHNQR 1020 Query: 772 LRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFE 831 L A+ EELEH++RRRDI+VDDE LF FY +RI DV+S RHFD+WW+K R +PDLL+F Sbjct: 1021 LLADAEELEHRARRRDIVVDDEVLFGFYAERIPADVVSVRHFDAWWRKARRGSPDLLDFP 1080 Query: 832 KSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGF 891 +S+L+ GA + + DYP+ W G L L LSYQFEPGA ADGVTVHIPLP+LNQV GF Sbjct: 1081 RSLLVSAGAGDVRETDYPDVWRLGELALPLSYQFEPGAAADGVTVHIPLPVLNQVSAEGF 1140 Query: 892 EWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMT 951 EWQ+PGLR ELV ALI+ LPK VRR+FVPAPNYA A L + P + PLL ++E ELRRM Sbjct: 1141 EWQVPGLREELVTALIRGLPKVVRRSFVPAPNYARAVLTHLTPGQAPLLVAVEHELRRMG 1200 Query: 952 GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDG 1011 G + R+ W VPDHL+ITFRV D + L EG+ L +K L+ + +E ++A A DG Sbjct: 1201 GPEIPRDSWSLAAVPDHLRITFRVEDARGAVLAEGKDLDAIKQRLRPRTREAVAAAA-DG 1259 Query: 1012 IEQSGLHIW-SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGL 1070 +E++GL W G LP E +RG + VKA+PALVDE +VA++ D EQ+QAMW G Sbjct: 1260 VERTGLRSWDGVGSLPRVVELRRGGHVVKAFPALVDEGSTVAVRATDTETEQRQAMWAGT 1319 Query: 1071 RRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWT 1130 RRL+LL + SPI+ L+ +L N AKL L NP+ +L+DDC+ D+LI A GGP W Sbjct: 1320 RRLVLLGVASPIRGLNGRLSNAAKLALSHNPHRDAADLLDDCVRAAADRLITAAGGPAWD 1379 Query: 1131 EEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMG 1190 E GF AL VRA L + + ++V+Q+L ++ L+ +A ++D + Q+ Sbjct: 1380 EAGFTALLAAVRAGLPEASFAVVREVQQVLALSHTVDLALRDLRAPALAASVADARGQLD 1439 Query: 1191 GLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINK 1250 L+YRGFVT G RL D RYL A+E+RLE+L DP RDR V ++A+++ + Sbjct: 1440 ALIYRGFVTDTGADRLADLARYLTALERRLERLPRDPGRDRINTATVGRAREAYRELLAT 1499 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 +P R E+++ IRWM+EELRVS FAQ L TPYP+S++R+ +A++ + G Sbjct: 1500 VPAGREPGEEIRRIRWMLEELRVSLFAQNLRTPYPVSEERVYRAIDTLLG 1549 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 235/391 (60%), Positives = 288/391 (73%), Gaps = 45/391 (11%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLS 328 + ERDQ QAI DAVDEL E GDIL+F+SGEREIRDTA+AL + +TEI+PLYARLS Sbjct: 352 EPERDQTQAISDAVDELCAEGPGDILVFLSGEREIRDTAEALAREQRPNTEIVPLYARLS 411 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 EQ+RVFQ H+GRR+VLATNVAETSLTVPGI+YVIDPGTARISRYS+RTKVQRLPIEP+ Sbjct: 412 AGEQHRVFQPHTGRRVVLATNVAETSLTVPGIRYVIDPGTARISRYSHRTKVQRLPIEPV 471 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 SQASANQRKGRCGR ++GICIRLYSE+DF RPEFTDPEILRTNLASVIL+M LGLGD+ Sbjct: 472 SQASANQRKGRCGRTADGICIRLYSEEDFAGRPEFTDPEILRTNLASVILRMADLGLGDM 531 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAI-----------------------TTDEQA---- 481 A F F++ PD R I DG LL ELGA TD A Sbjct: 532 ATFGFLDPPDPRQISDGELLLTELGAFDAGGTGPGRPVADAPAPDGTGASGTDAGAPVQG 591 Query: 482 ------------------SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 + ++TP+GR+L+Q+PVDPRLARMVL + GC+RE ++I + Sbjct: 592 GTGTSGAGASAARAGGTGTGRRITPIGRRLAQIPVDPRLARMVLAGDEQGCLREVLVIAA 651 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 AL+IQDPR+RP++ QQA+DE+H RF D SDFLA++NLWNYL + + LS+N FRR+CRT Sbjct: 652 ALAIQDPRDRPVEHQQAADERHARFADPTSDFLAYLNLWNYLRDARGELSANQFRRMCRT 711 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNS 614 ++LNYLR+REWQD++ QL V + LG+ ++ Sbjct: 712 EFLNYLRIREWQDVHGQLAAVARGLGLNADA 742 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 170/263 (64%), Positives = 209/263 (79%), Gaps = 3/263 (1%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI 71 L RL L D R RRL ++ + P A+Q + +A + D+AA +V R A P + Sbjct: 33 LSARLAELGPGDAHRLGRRLADTRRTREPAARQRALRAIAADTDRAAARVARRRANVPAL 92 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 +YP+ LPV+Q+K +IL AIRDHQVVI+AGETGSGKTTQLPKIC+ELGRG++G+IGHTQPR Sbjct: 93 SYPEILPVTQRKDEILAAIRDHQVVIIAGETGSGKTTQLPKICLELGRGVRGMIGHTQPR 152 Query: 132 RLAARTVANRIAEELKT---EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 R+AARTVA+RIAEEL T + GG +GY+ RF+D V D+T+VKLMTDGILLAEI DR L Sbjct: 153 RIAARTVADRIAEELGTPSPQAGGVVGYQTRFTDQVHDDTLVKLMTDGILLAEISSDRSL 212 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 +YDT+IIDEAHERSLNIDF+LGYL+ LLPRRPDLK++ITSATI+ RFS HF +AP+IE Sbjct: 213 RRYDTLIIDEAHERSLNIDFILGYLRSLLPRRPDLKVVITSATIETARFSAHFGDAPVIE 272 Query: 249 VSGRTYPVEVRYRPIVEEADDTE 271 VSGRTYPVEVRYRP+V A DT+ Sbjct: 273 VSGRTYPVEVRYRPLVPGARDTD 295 >UniRef50_D1N0X8 ATP-dependent helicase HrpA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0X8_9BACT Length = 1235 Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust. Identities = 476/1252 (38%), Positives = 699/1252 (55%), Gaps = 61/1252 (4%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 + +P+ LP+S+ +I +A V+IV G+TGSGKTTQLPKI + LG G +G IG TQP Sbjct: 19 VEFPEELPISRHVDEIKKAWESSPVIIVGGDTGSGKTTQLPKIALALGYGRRGRIGCTQP 78 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA ++ R+A+EL EPG +GY+VRF D + +T++K MTDGILLAE + DR L Q Sbjct: 79 RRIAASAMSRRVAQELGCEPGTGVGYQVRFDDRTTKSTVLKFMTDGILLAETRNDRSLRQ 138 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y+ +IIDEAHERSLNIDFLLGYLK LLP RPDLK+ I+SAT+D + FSR FN+AP+I + Sbjct: 139 YEVLIIDEAHERSLNIDFLLGYLKNLLPHRPDLKVAISSATLDTQEFSRFFNDAPVIAIE 198 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL 310 GRTYPVE + P E D+ Q+ + V L + GDIL+F+ GEREIRD D L Sbjct: 199 GRTYPVEDVFMP--PEYDEELSAQIARAAEFVTSL--DPQGDILVFLPGEREIRDATDVL 254 Query: 311 NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 LR+TE+LPL+ RLS ++Q +VF RRIVLATNVAETS+T+P I++VID G AR Sbjct: 255 TGRRLRNTEVLPLFGRLSAADQQKVFNPGGQRRIVLATNVAETSVTIPRIRFVIDSGLAR 314 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 I R++ RT+++ L +E ISQASA QR+GRCGR+++G+C+ LYSE+D +TDPEI R Sbjct: 315 IKRFNPRTQIEELQVESISQASARQRRGRCGRIADGVCVHLYSEEDLERSAPYTDPEIKR 374 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 T LA VILQM ALGL I FPF+ P +++G+R LE+L A+ A +LT G Sbjct: 375 TGLAGVILQMAALGLPRITHFPFINPPPPAAVREGLRTLEDLRALD-----PAGRLTREG 429 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 +L++LP+DP L +M+ A+K + E ++I + LSIQDP+ERP++KQQA+DE HRR+ D Sbjct: 430 WKLAELPIDPHLGKMLAFAEKRRVLPELLVIAAYLSIQDPQERPLEKQQAADEAHRRYRD 489 Query: 551 KESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL-- 608 K+SDF+ +NLWN + QQ+ S+ R R ++ N+ R+ EW+++ L +L Sbjct: 490 KKSDFVTILNLWNAI--QQECPSNRQLRVFARRNFYNFNRLLEWRNLAADLADAAADLKW 547 Query: 609 ---GIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK-KP 664 +P E Y ++H ++L G+ HI ++Q Y G +F IFPGSGLFK KP Sbjct: 548 SGAKLPKLLENPPYDQVHQSILAGIPRHIARYMPEEQHYLGTGARKFLIFPGSGLFKAKP 607 Query: 665 -PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVT 723 P+W+M LVETSRL+ R A I P+++E A HL R Y +P+W+ G V A E++T Sbjct: 608 APEWLMSFALVETSRLFARQNAAIRPDYLEQAAPHLCTRIYDQPYWDAESGFVYARERLT 667 Query: 724 VYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD------WQTRHAFFRENLKLRAEVE 777 GL I R+V YS+ PA RE+FIR AL G W + A E+L L Sbjct: 668 FGGLLIHNGRRVLYSKSHPAEAREIFIREALATGSVIIPKTWIEKSAHVLESLAL----- 722 Query: 778 ELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK 837 LE K RR ++D E + E Y + + S + K++ R + ++ Sbjct: 723 -LEEKVRRPGTILDPEAVVEHYLTLLPEGIDSVKSL----KELIRNDSQDYSITPQDAMQ 777 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 E + + DYP+ RL Y F PG DG+T+++P LN + +W +PG Sbjct: 778 EQFRQWEEGDYPDALAFSGQSFRLRYSFTPGEPEDGLTLYVPSDQLNLLPGHALDWLVPG 837 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP----LELPLLDSLERELRRMTGV 953 E V +I++LPKPVR+ P AF VK E PL +L LR G Sbjct: 838 YLPEKVELMIRALPKPVRQAAGPIAETVAAFCEAVKSGAVFSEQPLAAALAEYLRDNLGE 897 Query: 954 TVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIE 1013 V D+ ++P++L + ++ K ++ R ++ +++ + + + Sbjct: 898 PVAPADFDNVRLPEYLTMKLAELNRNGKIVQLHR---EIPASVQQGSRLSRAVAGAKNYT 954 Query: 1014 QSGLHIW-SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRR 1072 +G W LP E GN K A+PAL DE +S+ L+ E + G+ R Sbjct: 955 AAGCTAWPGLKPLPFEVELPNGNGKT-AYPALCDEGESIGQALYLKESEARMNHRKGIIR 1013 Query: 1073 LLLLNIPSPIKYLHE--KLPNKAKLGLYFNPYGKVLELIDDCISCGVDK-LIDANGGPVW 1129 L L + +K+ + +A+L + N +L+D I+ + L + G + Sbjct: 1014 LFKLENAAQLKFFKRTIRFSRQAELSWFLNYRDYADDLLDTAIAAAFESDLWEIRDGLAF 1073 Query: 1130 TEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQM 1189 G A H K EL V + KQ+E A + + + L R+ +D+K + Sbjct: 1074 ---GIGAEHAK--QELGCFVDRMVKQLEGYY-ANYQLGRDLAKRIKAQCPESAADMKRHL 1127 Query: 1190 GGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWIN 1249 L F+ + D RYL+ ++ R E+ A P RD ++ + + + Sbjct: 1128 DFLFRNRFLKSDFV--FEDYPRYLRGVKIRAERAAGAPGRDETKLDAISDYLDRFHLAAE 1185 Query: 1250 KLPPARREDEDVKEIRW-MIEELRVSYFAQQ--LGTPYPISDKRILQAMEQI 1298 +P D+ + W + EE R++ FA + LG P+ K++ +A E++ Sbjct: 1186 SVP--ELTDKPLLHDFWRLTEECRLAVFAPEVPLGERAPL--KKLDKAWEEL 1233 >UniRef50_UPI000050FFFD ATP-dependent helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FFFD Length = 1354 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/567 (64%), Positives = 445/567 (78%), Gaps = 24/567 (4%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++TYP+NLPVS K +I EAIRD+QVVIVAGETGSGKTTQLPKIC+ELG G+ GLIGHTQ Sbjct: 2 DVTYPENLPVSAAKDEIAEAIRDNQVVIVAGETGSGKTTQLPKICLELGLGVNGLIGHTQ 61 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AARTVA RIA+EL + GG IGY+VRF+ V+D+T VK+MTDGILL+E+ +D+LL Sbjct: 62 PRRIAARTVAERIADELGEDLGGTIGYQVRFTAQVADSTRVKVMTDGILLSELSRDKLLR 121 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 Y+ IIIDEAHERSLNIDFLLGYLKE++ +RP+LK+IITSATIDP+ F+ HF++APIIEV Sbjct: 122 DYEVIIIDEAHERSLNIDFLLGYLKEVMGKRPELKVIITSATIDPQSFAAHFDDAPIIEV 181 Query: 250 SGRTYPVEVRYRPIVE-----------EADDTE---RDQLQAIFDAVDELSQESHGDILI 295 +GRTYPVEVRYRP+V+ E+ E +Q + I A DELS E+ GDIL+ Sbjct: 182 AGRTYPVEVRYRPLVDDDEDDDVDGPGESGSYETGPEEQTEGIIAAFDELSTEAPGDILV 241 Query: 296 FMSGEREIRDTADAL-----NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 F+SGEREIRDTA+AL + L + E++PL+ARLS EQ +VF+ HS R+VLATNV Sbjct: 242 FLSGEREIRDTAEALEAHLRKRPRLSNWEVVPLFARLSAGEQQKVFKPHSRPRLVLATNV 301 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGIKYVID GTARISRYS RT+VQRLPIE ISQASANQRKGR GR S+GICIR Sbjct: 302 AETSLTVPGIKYVIDVGTARISRYSNRTRVQRLPIERISQASANQRKGRSGRTSDGICIR 361 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG----DIAAFPFVEAPDKRNIQDGV 466 LYSE DF SRPEFTDPEILRTNLASVILQMT LG +I FPF+ P+ + ++DG Sbjct: 362 LYSETDFDSRPEFTDPEILRTNLASVILQMTDLGFAASDKEILDFPFLTPPEAKAVRDGR 421 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 +L ELGA+T+D +A +TP GRQLS LP+DPRLARMV+ + GC E II +ALS Sbjct: 422 TMLAELGALTSD-KAGTITVTPTGRQLSLLPIDPRLARMVIAGAEAGCGGEVTIIVAALS 480 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 IQDPRERP + + A+DEKH RF SDFL+++NLWNYL +QQ AL+S+ FRR C+ ++L Sbjct: 481 IQDPRERPTEVRAAADEKHARFTHPGSDFLSYLNLWNYLDDQQSALTSSKFRRQCKAEFL 540 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVN 613 N++R+REWQD+ QLR + GI VN Sbjct: 541 NFVRIREWQDLVGQLRSLSGSAGIRVN 567 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 248/706 (35%), Positives = 368/706 (52%), Gaps = 38/706 (5%) Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 IH ALLTGLLS IG + ++Y GAR RF+IFPGSGLFKK P +VM AELVETSRLW Sbjct: 658 IHRALLTGLLSMIGSRSERNKDYQGARGTRFAIFPGSGLFKKKPDFVMAAELVETSRLWA 717 Query: 682 RIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQID 741 R + I+P+WV A L+ R YS+PHW + G M EK+++YG+ +V+ R+V Y D Sbjct: 718 RTVSAIEPDWVVEAAGDLVTRQYSDPHWSKKAGGSMVYEKISLYGVTLVSDRRVGYGTFD 777 Query: 742 PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQ 801 R++FIR L+EGDW R F N + E E L ++R +L D+ LFEFYD+ Sbjct: 778 REAARDMFIRKGLIEGDWHERFGFLETNAAVIDEAEALASRTRNSRVLDQDDALFEFYDE 837 Query: 802 RISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKL---DYPNFWH--QGN 856 RI + SA F +WWKK R +L+ S+L+ + +E+++ D+P W G+ Sbjct: 838 RIPATITSAADFRAWWKKQKRRDSHILDLSTSILLSDDSEELTASVADDFPMEWELVDGS 897 Query: 857 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 916 +L Y FEPG+ DGVTV +P + V+ F WQ+PGLR ELV A I+SLPK RR Sbjct: 898 TA-KLRYSFEPGSTEDGVTVELPAAAVPLVDSDEFSWQVPGLREELVAAYIRSLPKNKRR 956 Query: 917 NFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG---------VTVDREDWHWDQVPD 967 FVPAP+ A L + P L + L +L G +TV ED+ ++P Sbjct: 957 YFVPAPDVARDILPVLTPYRGALPEVLAAQLSERAGGGGLNDLVPITVTAEDFDLGRIPP 1016 Query: 968 HLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPE 1027 HL+I FRV+ D + G L+ L K +V++ A Q+G+ WSFG L Sbjct: 1017 HLRIRFRVI-DGTTTVGIGEDLKKLTKTAKPQVRKA-RAQQVSFTAQTGMTSWSFGALTN 1074 Query: 1028 SYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHE 1087 E + G A P LVD SV + FD + + + GL LL L +KYL + Sbjct: 1075 PDEAEVG-----AVPGLVDRGTSVDLVAFDTAAQARLSSREGLITLLSLRTNEALKYLRD 1129 Query: 1088 KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPV---WTEEG--FAALHEKVR 1142 L KL L + E++ + G+ +++A G W + F +L KV Sbjct: 1130 GLTTDEKLVLAGHQKTSD-EMLHALVRAGIRSVVEAELGAAETGWVADAVEFGSLETKVH 1188 Query: 1143 AELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNG 1202 A L D + + + L + ++K + + + L+D++A G V V Sbjct: 1189 AALTDMCASLLPHLMKALRSATELDKLVSKASSLAILSNLADVQAWRGSRVTGASVAAMS 1248 Query: 1203 FKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI-NKLPPARRED--- 1258 + + + R++QA R++ + P RD+ M +V + + + N+ P + D Sbjct: 1249 GQMVRELPRWVQAEVVRIDGMQNSPMRDKQLMDRVSGSTDSVMKKVGNRFPELSKADWSK 1308 Query: 1259 ------EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + +++ M+EELRVS +A LGT +P+S+KRI +A+ Q+ Sbjct: 1309 VVVSVPSEWRDVIIMLEELRVSLYANSLGTAHPVSEKRIAKALAQL 1354 >UniRef50_C0W5B9 Putative uncharacterized protein (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W5B9_9ACTO Length = 780 Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/780 (46%), Positives = 499/780 (63%), Gaps = 77/780 (9%) Query: 291 GDILIFMSGEREIRDTADAL-NKLNLRHT-----------EILPLYARLSNSEQNRVFQS 338 GDIL+F++GER+IRDT AL + L R+T E++PLY+RL+ +EQ+RVF++ Sbjct: 1 GDILVFLAGERDIRDTESALIDHLGPRYTMDGRTRTPGAVEVVPLYSRLTAAEQHRVFEA 60 Query: 339 HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398 HS RRIVLATNVAETSLTVPGI+YVIDPG ARISRYS RTKVQRLPIEPISQASANQR G Sbjct: 61 HSCRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSNRTKVQRLPIEPISQASANQRSG 120 Query: 399 RCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 RCGRV++GI IRLYSE D+LSRPE+T+PEILRT+LASVILQM LGLG + FPF++APD Sbjct: 121 RCGRVADGIAIRLYSEADYLSRPEYTEPEILRTSLASVILQMANLGLGAVEDFPFLDAPD 180 Query: 459 KRNIQDGVRLLEELGAITTDEQASAY------KLTPLGRQLSQLPVDPRLARMVLEAQKH 512 R ++DG++LL E+GAI + +LT +GR+L++LP+DPRL RM+L A + Sbjct: 181 HRAVRDGIQLLTEIGAIEPSMSGRSGRSSRGPRLTEVGRRLARLPIDPRLGRMLLRAGEL 240 Query: 513 GCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572 GC E M+I +ALSIQD RERP+DKQ+ +D HRRF D SDFL ++NLW YL Q + L Sbjct: 241 GCAGEVMVIVAALSIQDVRERPLDKQEQADALHRRFADPTSDFLTYLNLWRYLRTQSREL 300 Query: 573 SSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI---PVN-------------SEP 616 S +AFRR+C+ ++L+YLRVREWQD++TQLRQ+ + LG+ PV EP Sbjct: 301 SGSAFRRMCKAEFLHYLRVREWQDVHTQLRQLSRPLGLDAAPVELPTARSIRAARQALEP 360 Query: 617 AEYR-------------------------EIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 + IH +LL GLLS++G D ++EY+GAR R Sbjct: 361 GSHAAQIAHGDVAAAVVALGKSADTPDADAIHRSLLVGLLSNVGHWDERRREYSGARGTR 420 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH--LIKRTYSEPHW 709 F I+PGSGL +K WVM AELVETS L+ R A++D WVE A+ L+++ + EP+W Sbjct: 421 FMIWPGSGLRRKTYDWVMTAELVETSHLFARTVAKVDSRWVEETARQAGLLRQVFGEPYW 480 Query: 710 ERAQGAVMATEKVTVYGLPIVAARKVNYSQID-PA---LCRELFIRHALVEGDWQTRHAF 765 G M EKV VYG+ + A R + + PA + RE+F+R LVEG W RH F Sbjct: 481 STKNGCAMVHEKVMVYGMTLAADRPATLASVGTPAAREVAREMFLRSGLVEGGWHARHGF 540 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 N L E+ ++E + R +L DE L+ FYD R+ +V A FD+WW++ P Sbjct: 541 VSRNRDLIEELSDVEQRRREHGLLASDEALYRFYDDRVPDEVTGANDFDAWWRREKGRHP 600 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 LL++ + +L+ E YP+ W QG+L L L Y FEPG DGV+V +P+ +L + Sbjct: 601 HLLDYTRELLLPGADEDSLAAGYPDAWVQGDLTLGLDYVFEPGQADDGVSVLVPVEVLGR 660 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNY-AEAFLGRVKPLELP------ 938 +E +GF+W +PG+R ELV+A I++LPK VRR VPAP+ A+ + + + P Sbjct: 661 LEPAGFDWLVPGMRAELVVATIRALPKRVRRQLVPAPDVGAQVWAAMREEYQTPAGASAP 720 Query: 939 ---LLDSLERELRRMTGVTVDREDWHWDQ--VPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 ++ + R+ GV V DW Q +PDHL+++F +D + +++ G+ L L+ Sbjct: 721 PASFQEAFTAAVARLRGVEVTEADWAEAQEHLPDHLRVSFVALDSRGREIGRGKDLVALQ 780 >UniRef50_B1ZWH7 ATP-dependent helicase HrpA n=2 Tax=Opitutaceae RepID=B1ZWH7_OPITP Length = 1566 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/893 (41%), Positives = 509/893 (56%), Gaps = 161/893 (18%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 + +P LP+S + ++I AI+ + VVI+AGETGSGKTTQ+PK+C+ GRG G I TQP Sbjct: 33 LEFPPELPISARAEEITAAIQANAVVILAGETGSGKTTQIPKMCLAAGRGTHGRIACTQP 92 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA +V+ R+AEE+ G +G K+RFSD + +T+VK +TDG+LLAE+Q D LL Sbjct: 93 RRVAALSVSRRVAEEMNVTWGREVGCKIRFSDETTRDTVVKFLTDGMLLAEVQGDPLLRD 152 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTIIIDEAHERSLNIDFLLG+L+ L +RP+LKI+ITSATID E FS+ F++APII+V Sbjct: 153 YDTIIIDEAHERSLNIDFLLGHLRTLRYKRPELKIVITSATIDTEAFSKAFDDAPIIQVE 212 Query: 251 GRTYPVEVRYRPIVEEADD-------TERDQLQAIFDAVDE---------------LSQE 288 GR +PVEV Y P+ E D TE+ A+ A E + + Sbjct: 213 GRMFPVEVIYAPLDELGSDYDENDENTEKSDASAVASAKAEALHYIDGTVEAVERIIGES 272 Query: 289 SHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 S GDIL+F+ ER+IR+ + L +L +E++PL+ RLSN+EQ RVF R+I+LAT Sbjct: 273 SSGDILVFLPSERDIREVRELLEGRSLGRSELVPLFGRLSNAEQQRVFAPTQHRKIILAT 332 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLT+PGI +V+D G ARISRY+ + + +RLPIEP+SQ+SA+QRKGR GRV+ G+C Sbjct: 333 NIAETSLTIPGIHFVVDTGLARISRYAPQARTRRLPIEPVSQSSADQRKGRSGRVAHGVC 392 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 IRLYSE D+L RP FT PEI R NLA VIL+M A GLGDI FPF+ P ++I+ G L Sbjct: 393 IRLYSEKDYLERPRFTQPEIQRANLADVILRMKAFGLGDIERFPFINMPATKSIRAGYAL 452 Query: 469 LEELGAI-----------------------------------------------TTDEQA 481 LEELGA+ D Q Sbjct: 453 LEELGALDCRAGSPDPAVGAMLLRGAATPPSRPASTAATMRDEGIAPPFPSDPSAPDSQL 512 Query: 482 SAYKLTP---------LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 S P +GR+L++LPVDP + RM+L+A+ +RE ++I S LS+QDPRE Sbjct: 513 STLSSQPSPYSRPLTPVGRELARLPVDPTVGRMILQARTERALREVLVIASGLSVQDPRE 572 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP+DKQQ +D HRRF +SDFL +N+W+ ++ + LS RR CR +L+Y R+R Sbjct: 573 RPLDKQQQADTAHRRFRHPDSDFLTLLNIWDAYHDEFERLSQAKLRRFCREHFLSYTRMR 632 Query: 593 EWQDIYTQLRQVVKE---------------LGI------------PVNSEPA-------- 617 EW+DI+ QL V++E G+ P ++ PA Sbjct: 633 EWRDIHAQLLDVLEERRDFQLTSVAELARGTGVPPVSPKRGSPRHPASASPAGASLADAR 692 Query: 618 ------------------------EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 YR IH ++L GLL ++ D + Y + R + Sbjct: 693 NRRQTAPRVKSESQADDPLAFGTPAYRAIHRSILAGLLGNVATLDEENGNYKATHDRRVN 752 Query: 654 IFPGSGLF------KKP-----------------PKWVMVAELVETSRLWGRIAARIDPE 690 +FPGS LF KKP P+W+M AE++ETSRL+ R AR+DP Sbjct: 753 LFPGSVLFQRESPRKKPLNAQPSTLNSSAARGRAPRWIMAAEIMETSRLYARTCARLDPA 812 Query: 691 WVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI 750 W+ +A HL++ T+SEP W G VM ++ +YGL I +R V Y +I+P E+FI Sbjct: 813 WLLELAGHLVRVTHSEPFWNPDAGRVMVKQRTRLYGLEI-DSRAVGYGRINPTHATEIFI 871 Query: 751 RHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRI 803 R ALV + F N ++R +E + ++R L DE FY R+ Sbjct: 872 REALVNDTLTRQIDFLEHNRRIRENIEAILTRTRDTGYLNLDEAACRFYASRL 924 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 124/514 (24%), Positives = 217/514 (42%), Gaps = 70/514 (13%) Query: 848 YPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALI 907 +P N L L+Y ++PG DGVT+ + + + + +W +PG V + Sbjct: 1018 FPETLPLENRALPLNYAYKPGQAEDGVTLELNVREAEALTPAALDWAVPGYLEPKVEHYL 1077 Query: 908 KSLPKPVRRNFVPAPNYAEAFLG------RVKPLELPLLDSLERELRRMTGVTVDREDWH 961 ++LPK +RR FVP A A + R+ L ++L + V +D W Sbjct: 1078 RALPKELRRGFVPLAETARALVAQLAERDRLTGRRETLTEALAFLISERFRVAIDSALWA 1137 Query: 962 WDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI--------- 1012 PDHL++ RV+DD+ ++L R+L +++ AL + +E +AVA Sbjct: 1138 DKPPPDHLRVRVRVLDDEERELCASRNLDEIQAALHTQKREASAAVAHAEPVAWRQARAR 1197 Query: 1013 -EQSGLHIWSFGQLPES-YEQKRGNYKVKAWPALVDERD---------------SVAIKL 1055 E+ W+FG++P ++ V A+PAL E VA++L Sbjct: 1198 WEKPPQTEWTFGEIPARVLVTEQAGVPVFAFPALQPETGDKHAVGPALAAGRYRGVALRL 1257 Query: 1056 FDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLG-----------LYFNPYGK 1104 F P E AM +GL LL L + + +L L LG L + + Sbjct: 1258 FKTPEEAGAAMLHGLSTLLELQLSRDLGWLERDLRALRPLGPLAATLTPLESLQADAFAM 1317 Query: 1105 VLELIDDCISC-------GVDKLIDANGG---PVWTEEGFAALHEKVRAELNDTVVDIAK 1154 + + D C K D G P + + FAA + +++L + ++ Sbjct: 1318 LRRWLIDPERCRAGSPDSAAAKASDERRGAEPPPYNKPAFAAAVARAKSDLQGLIPRLSD 1377 Query: 1155 QVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQ 1214 + +ILT ++ + + + L+ F + +L RYL+ Sbjct: 1378 LLREILTLRQSL---------LVHPTPYPKLDQDLAALLPPDFPRHTPYSQLAHFPRYLK 1428 Query: 1215 AIEKRLEKLAVDPHRD--RAQML-----KVENVQQAWQQWINKLPPARREDED-VKEIRW 1266 A+ R ++ +P +D RA L + + +A P + D + ++ RW Sbjct: 1429 AMTLRADRWRKNPAKDAERAAQLAPYVAALVKLSRARTTPAAATPSSGSADVNRLESFRW 1488 Query: 1267 MIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 +IEE RVS FAQ+LGT P+S ++ +A+ +++G Sbjct: 1489 LIEEFRVSLFAQELGTAEPVSAVKLDRALAELTG 1522 >UniRef50_B5JKC1 ATP-dependent helicase HrpA n=5 Tax=Bacteria RepID=B5JKC1_9BACT Length = 1500 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/841 (43%), Positives = 506/841 (60%), Gaps = 87/841 (10%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHT 128 +I YP LP+SQ++ +I+ AI+ HQ +++ GETGSGKTTQ+PK+ ++ G G I T Sbjct: 19 QIHYPPELPISQRRDEIVSAIQAHQTIVLTGETGSGKTTQIPKMLLDAGYARSGKKIACT 78 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA +VA R++EEL E G +G K+RF+D S T VK MTDG+LL EI D L+ Sbjct: 79 QPRRVAALSVAKRVSEELGVEFGQEVGAKIRFTDQTSKKTRVKFMTDGMLLTEIHADPLM 138 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 YD +IIDEAHERSLNIDFLLG+L +L RRPDLKI+ITSATID ++FS F++APIIE Sbjct: 139 RDYDAVIIDEAHERSLNIDFLLGHLNQLRARRPDLKIVITSATIDTDKFSTAFDHAPIIE 198 Query: 249 VSGRTYPVEVRYRPIVEEADDT-ERDQLQAIFDAVDELSQE--SHGDILIFMSGEREIRD 305 VSGR YPV++ Y P+ E +D+ + L+ I ++ + E GDIL F+ E++IR+ Sbjct: 199 VSGRVYPVDIIYAPLDELLEDSGDYTYLEGIAESTQRIQDEFGPSGDILAFLPTEKDIRE 258 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 D L R EI+P + RLSN++Q R+FQ+ R+++LATN+AETSLT+PGI++VID Sbjct: 259 AMDLLEDRFGRRLEIIPCFGRLSNADQQRIFQTSPKRKLILATNIAETSLTIPGIRFVID 318 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARISRY+ R + +RLPI ISQ+SANQR GRCGRV++GICIRLYSE D+ SR ++ Sbjct: 319 TGLARISRYNPRGRTKRLPITKISQSSANQRSGRCGRVADGICIRLYSEKDYQSRDIYST 378 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT--DEQASA 483 PEI R NLA VIL+M A LG + FPF++ P I G +LL+ELGA+ + Sbjct: 379 PEIQRANLADVILRMLASRLGHVETFPFIDPPTPAAITAGYQLLQELGALKPPRTQNPEP 438 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 LT GRQL++LP DP + RM+LEA +H E ++I SALSIQDPRERPMD++ A+ + Sbjct: 439 KTLTQTGRQLARLPADPTVGRMLLEANRHNVTHEVLVIASALSIQDPRERPMDREAAARQ 498 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR- 602 H +F SDFL +N+W L + + LS + R+ C+ ++LNYLR+REW+DIY QL+ Sbjct: 499 AHAQFDHPHSDFLTLLNIWEALHDNFEKLSQSRLRKFCKKNFLNYLRIREWRDIYQQLQR 558 Query: 603 ---------------QVVKELG---------------------------------IPVNS 614 Q K G +P+ Sbjct: 559 SLPKGRSELAREHTTQSPKPTGSKSHLLGEADLTKSRRNPPTTKSNSPLTPHSSPLPIER 618 Query: 615 EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF------------- 661 A Y IH LLTGLLS+IG ++ + Y + N + IFPGS LF Sbjct: 619 ASARYESIHACLLTGLLSNIGRRE-ETNLYRSSANRKPLIFPGSALFIRQARNKKTGKRK 677 Query: 662 ----------KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 KK P+W++ E+VETSRL+ R A IDP W+ V H++ +YS+P + Sbjct: 678 DPGTESGPKKKKSPEWILSGEIVETSRLYARTVASIDPTWILDVGSHIVTHSYSDPDFLP 737 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTR---HAFFRE 768 QG V+A E + ++GL I ++V+Y ++DPA E+FIR AL+ D++ F Sbjct: 738 DQGRVVARESIRIHGLEI-QNKQVSYLKVDPAKATEIFIREALLNEDYEAPANWTTFLEP 796 Query: 769 NLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVIS----ARHFDSWWKKVSRET 824 N +L + ++ + + +E ++FY +R+ + V S R S S E+ Sbjct: 797 NRRLISRIQNAQTVISVAHWMGVEEAAYQFYKKRLQNQVASNADLNRLLKSLHHPASAES 856 Query: 825 P 825 P Sbjct: 857 P 857 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 122/546 (22%), Positives = 213/546 (39%), Gaps = 68/546 (12%) Query: 809 SARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPG 868 S++ F+S + +++P LL E + E A L +P N L + YQ++ G Sbjct: 913 SSKKFESIREIRGQQSPLLLMQESDLTSSETASVDLSL-FPETIQLENSALPIEYQYKAG 971 Query: 869 ADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAF 928 DGVT+ +P V ++ +W IPG + AL+K+LPK +R +P A+ Sbjct: 972 HANDGVTLKLPYAKAKSVNDALLDWLIPGHLEPKIHALLKALPKQIRARLIPLAETAKTI 1031 Query: 929 LGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRS 988 ++P L SL+ L++ + DW +PDHL+ + D K + + R Sbjct: 1032 AADIRPTGDTLTTSLQHHLQKTYSIETYASDWDDTVIPDHLRARVEIHDKTGKPIAQARD 1091 Query: 989 LQDLKDAL--------KGKVQETLS--------------AVAD--------DGIEQSGLH 1018 L L + +T S +++D D ++ L Sbjct: 1092 AATLHQKLAEQERALSEAATNDTTSLWQKARQTHERQIHSISDLRQVLSATDNRTEAPLP 1151 Query: 1019 IWSFGQLPESYE----QKRGNYKVKAWPALVDERDSVA---------------IKLFDNP 1059 S L Y + A+PAL S++ I LF P Sbjct: 1152 SQSNSPLTTHYSLLLIGCPNGIPLYAYPALRSSPISISTTQNPEPSTQHPEIHISLFRTP 1211 Query: 1060 LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDK 1119 E + G+ LL + + ++ L + +++G P+ + +L +D + + Sbjct: 1212 EEATASNHAGISALLEHELRRELAWIRTDLKDVSRVGPVAIPFRPIADLKEDVYE-HIRQ 1270 Query: 1120 LIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMA 1179 + + E A E+ + Q++ IL KR V +A Sbjct: 1271 TLRIHDLDTLDPEALHAARERAHERSKGILYKTVDQLKAIL------EKRQALIVQPPIA 1324 Query: 1180 LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN 1239 + A + L+ F+ L YL I R + A +P RD + ++++ Sbjct: 1325 KAYA---ADIDRLLPPDFLRHTPNHILPRIPVYLDTIAHRAKTAAQNPTRDAQRQTQLDH 1381 Query: 1240 VQQAWQQW------INKLPPARRE--DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +Q Q I+ P + + + ++R+MIEE VS FAQ LGT +PIS K++ Sbjct: 1382 YRQRLTQLHAGAGSIHHSPLTTHQSANSSIAKLRFMIEEFAVSLFAQHLGTAHPISPKKL 1441 Query: 1292 LQAMEQ 1297 QA + Sbjct: 1442 DQAFAE 1447 >UniRef50_A7NAU7 ATP-dependent helicase n=16 Tax=Francisella RepID=A7NAU7_FRATF Length = 1444 Score = 627 bits (1617), Expect = e-178, Method: Compositional matrix adjust. Identities = 319/569 (56%), Positives = 421/569 (73%), Gaps = 12/569 (2%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P+ITYPD LPV+++ DI + ++D+QV++VAGETGSGK+TQLPKIC++LG G +GLIGHT Sbjct: 51 PKITYPD-LPVAERVDDIKKLLQDNQVIVVAGETGSGKSTQLPKICLDLGLGKRGLIGHT 109 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRRLAAR++A+RIA E+ + + +K+RFSD S+NT++K+MTDG+LL+EI+ DR L Sbjct: 110 QPRRLAARSIASRIANEIGDQSK--VSFKIRFSDQTSENTLIKVMTDGVLLSEIKNDRFL 167 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 QY+ IIIDEAHERSLNIDFLLG +K++LP RPDLK+IITSATID ++F F NA I Sbjct: 168 SQYEVIIIDEAHERSLNIDFLLGCIKKILPFRPDLKVIITSATIDHQKFINFFQNAKDII 227 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTAD 308 +SGRTYPVE+RY+ + D E + I A+DEL + GD+L+F+ ER+I +T Sbjct: 228 ISGRTYPVEIRYQ---NDEDFDEFSLQERILYALDELGR---GDVLVFLPTERDIHETLA 281 Query: 309 ALNKLNLRHTEILPLYARLSNSEQNRVFQSH-SGRRIVLATNVAETSLTVPGIKYVIDPG 367 LNK NLR TE+LPL++RLSN +QN++F S RR++LATNVAETSLTVP IKYVID G Sbjct: 282 YLNKQNLRFTEVLPLFSRLSNKDQNKIFNPEGSVRRVILATNVAETSLTVPRIKYVIDSG 341 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427 ARISRYSYRTKVQRLPIE ISQASANQR GRCGR+S GICIRLYSE+DF +R E+T+PE Sbjct: 342 LARISRYSYRTKVQRLPIEKISQASANQRAGRCGRLSAGICIRLYSEEDFNNRKEYTEPE 401 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 ILRTNLASVILQM L LG I FPF++APD R ++DG +LL EL AI ++ S K+T Sbjct: 402 ILRTNLASVILQMLFLKLGSIQDFPFIDAPDARFVKDGFKLLFELQAI-SELNYSKPKIT 460 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRR 547 G +++ +P+DP+LA++V+E + +RE + I S LS+QDPRERP++ QQ +DEKH Sbjct: 461 DDGMKMAVMPLDPKLAKIVIEGYRQKTLREIVSIVSFLSVQDPRERPLNLQQKADEKHSV 520 Query: 548 FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 DK SDF+A +NL N L K LS+ + + ++++ +R EW DIY Q+ +V+ Sbjct: 521 DKDKSSDFVAILNLANRLNSDLKGLSNREKKEYFKKNFISLVRFNEWNDIYRQIIEVIHG 580 Query: 608 LGIPVNSEPAEYREI-HIALLTGLLSHIG 635 G +NS+ ++ H L HIG Sbjct: 581 FGWKLNSQLVIKKDSGHSGLDPESFEHIG 609 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 168/459 (36%), Positives = 270/459 (58%), Gaps = 9/459 (1%) Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 Y +H A+ +G LS+IG + + EY GAR +F IFPGS FK PKW++ +E+VET++ Sbjct: 669 YENLHKAIASGFLSNIGY-NYENAEYLGARGLKFFIFPGSFQFKAKPKWLLSSEIVETTK 727 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYS 738 + R A+I+PEW+E +A HL+K+ Y EP W + + AV+ E+VT+YGL IV+ R V YS Sbjct: 728 TYVRNVAKIEPEWLESLASHLVKKHYDEPVWSKKRRAVIVNERVTLYGLEIVSKRVVQYS 787 Query: 739 QIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF 798 +I+P RE+FIR ALV+GD+ ++ F+++NLKL +VE+LE+KSRR+DILVD++T+FE Sbjct: 788 KINPREAREIFIREALVKGDFDSKTYFYQQNLKLINQVEDLENKSRRKDILVDEQTMFEH 847 Query: 799 YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLK 858 YD IS +V + FD W K V + F L++ GA++I++ +P+ G++ Sbjct: 848 YDAFISDEVCNGATFDKWLKTVRKAQQQKFIFGLESLMQHGAKEITQQKFPDVLTIGDMH 907 Query: 859 LRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNF 918 L L Y F+P + DG TV +P+ +N + + EW + G + ++AL+++LPK +R+N Sbjct: 908 LPLEYNFDPLDERDGATVTVPIVFINNISSAVLEWGVYGFLYDKIVALLRALPKNIRKNC 967 Query: 919 VPAPNYAEAFLGRV---KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRV 975 VP P YA+A + K +PL + + + R+ G VD W +++ +L + +V Sbjct: 968 VPVPTYAQAIFESLDFDKDRYIPLKSVIAKHITRIVGFVVDETVWQNEELEKYLVLNIKV 1027 Query: 976 VDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGN 1035 VD+ K L G+ + LK LK V + AV ++ + W F + + + K Sbjct: 1028 VDEHGKTLALGKDINTLKQKLKNLVNKPKQAV-----DEKIYYDWDFADIALTNQIKEYG 1082 Query: 1036 YKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 VK + L + + V + E + M L+RL+ Sbjct: 1083 IVVKVYNCLEEYKGGVKLSYKATLAEAQSCMKRALKRLI 1121 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 3/88 (3%) Query: 1212 YLQAIEKRLEKLAVDPHRDRAQMLKVENVQ-QAWQQWINKLPPARREDEDVKEIRWMIEE 1270 Y+QA+E RL+K ++ RDR L+ + ++ + ++ + K DE+V +IR++I+E Sbjct: 1337 YIQALENRLDKAKLNLQRDRNYQLEADELKAKLAKKLVTK--HLSTGDEEVTKIRFLIKE 1394 Query: 1271 LRVSYFAQQLGTPYPISDKRILQAMEQI 1298 L +S++ Q + T IS K+IL + QI Sbjct: 1395 LWISWYLQNIKTSESISVKKILVYINQI 1422 >UniRef50_Q6A8Y5 ATP-dependent helicase HrpA n=3 Tax=Propionibacterium acnes RepID=Q6A8Y5_PROAC Length = 1361 Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust. Identities = 314/506 (62%), Positives = 384/506 (75%), Gaps = 32/506 (6%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +T+ +LP++ +I + I+ HQVV+VAGETGSGKTTQLPKIC+ LGR I HTQP Sbjct: 16 VTFDTDLPIAAHADEIADLIKHHQVVVVAGETGSGKTTQLPKICLALGRR---QIAHTQP 72 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA R+AEE+ E G +GY+VRF+ S +T + +MTDG+LLAEI DR L Sbjct: 73 RRIAARSVAERVAEEMGVELGEQVGYQVRFTRRASSDTALTVMTDGVLLAEISHDRDLCA 132 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 +DTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID RFS HF++AP+IEVS Sbjct: 133 HDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTARFSAHFDDAPVIEVS 192 Query: 251 GRTYPVEVRYRPI----------------------------VEEADDTERDQLQAIFDAV 282 GRTYPVEVRYRP+ + DD DQ+ I AV Sbjct: 193 GRTYPVEVRYRPLDPSEQIRPDDEDDIDDEDELLHRPSAPSLTSPDDEVVDQVTGICRAV 252 Query: 283 DELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGR 342 EL +E GDIL+F++GE+EIR+TA+AL LNL +TE+LPL+ARLS +EQ+RVF H+GR Sbjct: 253 QELCREESGDILVFLAGEQEIRETAEALADLNLSNTEVLPLFARLSAAEQHRVFTPHTGR 312 Query: 343 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGR 402 RIVLATNVAETSLTVPGI+YVIDPGTARISRYS RTKVQRLPIEP+SQASANQR GRCGR Sbjct: 313 RIVLATNVAETSLTVPGIRYVIDPGTARISRYSVRTKVQRLPIEPVSQASANQRAGRCGR 372 Query: 403 VSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 V+ GICIRLYS+ F SRPEFT+PEILRTNLA+VILQM LG I FPFVEAPD+ I Sbjct: 373 VAPGICIRLYSQTSFESRPEFTEPEILRTNLAAVILQMAQARLGAITDFPFVEAPDRSRI 432 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 DG+RLL+ELGA+ + A +LT +G QL+++P+DPRL RM+LE + G + E ++I Sbjct: 433 NDGIRLLDELGALKPGHR-DASRLTKIGHQLARVPLDPRLGRMLLEGARQGSLAEVLVIV 491 Query: 523 SALSIQDPRERPMDKQQASDEKHRRF 548 +ALSI+D RERP DK++ +D HRRF Sbjct: 492 AALSIRDVRERPADKREEADAFHRRF 517 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 294/790 (37%), Positives = 444/790 (56%), Gaps = 51/790 (6%) Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 D+ D +A LW YL Q++ + S+AFRR+CR +Y+NYLRVREW D++ QLRQ+ KEL Sbjct: 583 DEGGDIMAIHRLWRYLRHQRRQMGSSAFRRMCRAEYINYLRVREWDDLHGQLRQIAKELH 642 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGM-----------KDADKQEYTGARNARFSIFPGS 658 + VN A + +ALL+GLLSHIG+ + QEY GAR +F+I PGS Sbjct: 643 LEVNRTSAPTDRVLVALLSGLLSHIGLVQVRQPAKRHGQRPGPQEYLGARGTKFAINPGS 702 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 L +K P+ V+ ELVETSRLW R A + PEWVE VA LI+R+++ PHW + +V+A Sbjct: 703 LLARKSPELVVAVELVETSRLWARTVAAVQPEWVEEVAGPLIRRSWAVPHWAASTASVVA 762 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 TE+ T++G+P+ A R+V Y +IDP R++FIR ALVE +W++ H F + N ++R E + Sbjct: 763 TERGTLFGVPLWADRRVTYGRIDPVASRQIFIRSALVERNWRSDHGFLKHNDRVRDEAAD 822 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE +SR+R ++ DD+ +F FYD+RI ++S HFD+WW++V + L+ L+ Sbjct: 823 LEERSRQRGLVADDDAIFAFYDRRIPDGIVSGSHFDAWWRRV--QDRHQLDLSIDDLVDS 880 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 G+ + +P+ W GNL+L + Y FEPG+ DGVTV IPL LLNQV + F WQ+PGL Sbjct: 881 GS--VDADAFPDHWKVGNLELPVRYVFEPGSGHDGVTVTIPLALLNQVPTAPFSWQVPGL 938 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE----LPLLDSLERELRRMTGVT 954 R EL LI++LPK +R VPAP+ A A L ++ + P + L R LR +TGV Sbjct: 939 RTELATELIRALPKRIRTQLVPAPDRARAALTWLEDHDADRHAPFTNELGRALRTLTGVI 998 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNK--------------------KLKEGRSLQDLKD 994 ++ +DW+ +P HL+I F + D + + + L L+ Sbjct: 999 INPDDWNIAAIPAHLRIGFDITDAEGRPVGKKSKKNGKDKLKGSQPAPIARSEDLDALQT 1058 Query: 995 ALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIK 1054 L KV ++L+ A + G W+F +P+ + R +P LVDE DSV Sbjct: 1059 DLAPKVSQSLTKAAGQP-QIHGAKEWTFDPIPKRVDLSRKGPDAVGYPCLVDEGDSVGTT 1117 Query: 1055 LFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC-- 1112 + D P Q+ + +G+ +LL+LN+P P K++ + N KL L +PY V L+ D Sbjct: 1118 VLDTPRAQRTSHASGVVKLLVLNLPDPTKWVVTHMDNATKLALATSPYPSVPALLADARH 1177 Query: 1113 ---ISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKR 1169 S +K D +G + ++ F L VR + D + + + +IL+ V + Sbjct: 1178 KAVASVAQEKAGDLSG--IRDKKTFDDLALVVRQDQADRMARVVRTAGRILSRVVAARQA 1235 Query: 1170 LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHR 1229 L D + +DI AQ+ LV+ F++ D R++Q + R+E L +P R Sbjct: 1236 LATVSDPAIH---ADIVAQIDDLVFENFISATPDPWYDDMPRWIQGVSVRIESLMTNPSR 1292 Query: 1230 DRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDK 1289 D QM ++E + + + P + E V+EI +M+EELRV YFAQ+LGT +S K Sbjct: 1293 DPRQMAELEPLLADYDALCEEQPAGKLPAE-VEEIGFMLEELRVQYFAQKLGTRVSVSPK 1351 Query: 1290 RILQAMEQIS 1299 RI A+ ++S Sbjct: 1352 RIRMAIAKLS 1361 >UniRef50_B2SSX2 ATP-dependent helicase HrpA n=13 Tax=Xanthomonadaceae RepID=B2SSX2_XANOP Length = 1373 Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust. Identities = 330/617 (53%), Positives = 432/617 (70%), Gaps = 28/617 (4%) Query: 16 LDSLMLRDRLRFS---RRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEIT 72 +D M DR R R G K NP + A Q +A Q R +P IT Sbjct: 19 VDGAMSHDRGRLLGLWSRWQG--KPGNPQVRDAFEQALAASQAQRQA----RAEQQPAIT 72 Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 + LP++++ + I+ IRDHQVV++AGETGSGKTTQLPK+C+ GRG G+IG TQPRR Sbjct: 73 LDNQLPIAREAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRR 132 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AAR VA R+AEELKT G +G++VRF+D VS+ + +K MTDGILLAEI DR L YD Sbjct: 133 IAARAVAARVAEELKTPLGTIVGFQVRFTDRVSEQSRIKFMTDGILLAEIASDRWLSAYD 192 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGR 252 TII+DEAHERSLNIDFLLGYLK+LL +R DLK+I+TSATID ERF++HF+NAP+I V GR Sbjct: 193 TIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQHFDNAPVINVEGR 252 Query: 253 TYPVEVRYRPIVEEADDT-----------ERDQLQAIFDAVDELSQ-ESHGDILIFMSGE 300 T+PVEVRYRP+ + D+ ER AI A+DE+++ + GD+L+F+ GE Sbjct: 253 TFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGE 312 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIRD AL + R TE++PLYARLS ++Q+RVF RR+VLATNVAETSLTVP I Sbjct: 313 REIRDAHQALERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRI 372 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 +YV+DPG AR+ RYS R K+ RL IEPISQASANQR GRCGR++EGIC RLY+E DF +R Sbjct: 373 RYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGICYRLYAEADFAAR 432 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P FTDPEI R++L+ VIL+M LGLG I FPF+EAPD+R + DG + L ELGAI Sbjct: 433 PAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQLLELGAIDAQR- 491 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 +LT G Q+++LPVD +LARM++ AQ+HGC+RE +II + L IQDPRERP + ++A Sbjct: 492 ----RLTATGCQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPAEAREA 547 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +D H F D S+F+ + LW+ + + L+ + R C +L +LR+REW++++ Q Sbjct: 548 ADNAHALFADVRSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQ 607 Query: 601 LRQVVKELGIPVNSEPA 617 LR + +ELG + EPA Sbjct: 608 LRLLCEELGW--SEEPA 622 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 233/687 (33%), Positives = 358/687 (52%), Gaps = 28/687 (4%) Query: 617 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET 676 A Y+ +H ALL GL + IG + +K +Y AR RF FPGS L +KPP W++ A L++T Sbjct: 698 AAYQSLHRALLAGLPTQIGHR-TEKGDYLAARQRRFVPFPGSALARKPPPWIVAATLLDT 756 Query: 677 SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVN 736 ++WG A I+P+W HL+ R + + HW RAQG V+A+E+++++GL + + V+ Sbjct: 757 QKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASEQISLFGLVLAPKKPVH 816 Query: 737 YSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLF 796 + +IDPA +LF+R LV G+ TR AF +NLK+ + E E K RR I+ D++ Sbjct: 817 FGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEDWQA 876 Query: 797 EFYDQRISHDVISARHFDSWWKKVSRETPDLLNFE-KSMLIKEGAEKISKLDYPNFWHQG 855 +Y RI ++ SA D+WWK + + L++ +L EG E +P ++ G Sbjct: 877 RWYLDRIPAELHSASGLDAWWKSLPPDKRRSLHWSLNDVLPGEGCEADR---FPKYFPLG 933 Query: 856 NLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVR 915 + +L L Y+FEPGA DGVT+ + L LLN ++ + W PG + ALI+SLPK R Sbjct: 934 DARLPLHYRFEPGAIDDGVTLDVALHLLNALDPARLSWLAPGFVADKASALIRSLPKAQR 993 Query: 916 RNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRM----TGVTVDREDWHWDQVPDHLKI 971 RN+VPAP++ AF + + D + EL R TG V D+ + HL + Sbjct: 994 RNYVPAPDFGRAF---YEAFNVASADDIRGELARFLTKATGAHVAALDFDEQALDTHLLM 1050 Query: 972 TFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQ 1031 RV DD K L E R L L+ + + +A A + GL + +P EQ Sbjct: 1051 NLRVRDDDGKVLDESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFPTAPIP---EQ 1107 Query: 1032 KRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPN 1091 G V A+PALVD+ D+ A+++F + E +A G+RRLL + + IK ++LP Sbjct: 1108 VAGEAGVPAYPALVDQGDNAALRIFADRNEAARAHPRGVRRLLEIALADKIKQARKQLPV 1167 Query: 1092 KAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVD 1151 K GL + L D + ++ ++ G + FA + L ++ Sbjct: 1168 SPKTGLLYAAIESQERLRGDLVDAALNAVLADGLGAIRDPGAFAQRRDDAIKRLFGEAME 1227 Query: 1152 IAKQVEQILTAVFNINKRLKGRVDMTMALG-LSDIKAQMGGLVYRGFVTGNGFKRLGDTL 1210 E IL AV + L+ + M A G L D++ Q+ LV+ GF+ L + Sbjct: 1228 RLTLAESILGAVAELKPLLEAPL-MGWARGNLDDMEQQLRALVHAGFLRDTPADALANYP 1286 Query: 1211 RYLQAIEKRLEKLAVDPHRDRAQMLK----VENVQQAWQQWINKLPPARREDEDVKEIRW 1266 RYL+A+ R E+ DP RD+A+ML+ V+ V+ A + ED + +RW Sbjct: 1287 RYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQN-------REDWQALRW 1339 Query: 1267 MIEELRVSYFAQQLGTPYPISDKRILQ 1293 +EELRVS FAQ+LG +S K++ Q Sbjct: 1340 DLEELRVSVFAQELGAKSGVSAKKLSQ 1366 >UniRef50_D2UEZ1 Putative atp-dependent helicase protein n=1 Tax=Xanthomonas albilineans RepID=D2UEZ1_XANAL Length = 1375 Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust. Identities = 321/590 (54%), Positives = 422/590 (71%), Gaps = 17/590 (2%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 I LP++++ + I+ IR HQVV++AGETGSGKTTQLPK+C+ GRG G+IG TQP Sbjct: 72 IVLDPQLPIAREAERIVALIRAHQVVVIAGETGSGKTTQLPKLCLIAGRGAAGMIGCTQP 131 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR VA R+AEEL+T G +G++VRF+D V + T+VK MTDGILLAEI DR L Sbjct: 132 RRIAARAVAARVAEELRTPVGETVGFQVRFNDRVGEQTLVKFMTDGILLAEIASDRWLSS 191 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTII+DEAHERSLNIDFLLGYLK+LL +RP+LK+I+TSATID RF+ HF +AP+I V Sbjct: 192 YDTIIVDEAHERSLNIDFLLGYLKQLLRKRPELKVIVTSATIDTARFAAHFEDAPVIGVE 251 Query: 251 GRTYPVEVRYRPIVEEADDT--------ERDQLQAIFDAVDELSQ-ESHGDILIFMSGER 301 GRTYPVEVRYRP+ +E+ DT ER +AI AVDE+++ + GD+L+F+ GER Sbjct: 252 GRTYPVEVRYRPLQDESGDTDASGDSAGERTVNEAILAAVDEITRLDPRGDVLLFLPGER 311 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 EIRD AL + R TE+LPLYARLS S+Q+RVF RR+VLATNVAETSLTVP I+ Sbjct: 312 EIRDAHQALERRKYRETEVLPLYARLSASDQDRVFNPGPRRRLVLATNVAETSLTVPRIR 371 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YV+DPG AR+ RYS R K+ RL IEPISQASANQRKGRCGR++EGIC RLY+E DF +RP Sbjct: 372 YVVDPGYARVKRYSPRQKLDRLHIEPISQASANQRKGRCGRIAEGICYRLYAEADFQARP 431 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 FTDPEI R++LA VIL+M LGLG + FPF+E PD+R + DG + L ELGA+ ++ Sbjct: 432 MFTDPEIRRSSLAGVILRMLQLGLGRMEDFPFLEPPDERAVADGWQQLVELGAVGEPDRH 491 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 KLT +GR++++LPVD +LARM++ AQ+H C+R ++I + L IQDPRERP + ++A+ Sbjct: 492 GVRKLTEIGRKMARLPVDVKLARMLVAAQQHACLRPMLVIAAFLGIQDPRERPPEAREAA 551 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 D H +F D S+F+ + LW+ + + L+ + R C +L +LR+REW++++ QL Sbjct: 552 DNAHAKFADARSEFVGILRLWDGYRQAHEELTQSKLRDWCARHFLGFLRMREWRELHRQL 611 Query: 602 RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 + ELG + EPA ALL LL+ + T AR R Sbjct: 612 HLLCAELGW--SEEPAS------ALLQPLLTAAAAPAPARDAETAARMTR 653 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 227/682 (33%), Positives = 368/682 (53%), Gaps = 18/682 (2%) Query: 617 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET 676 A Y+ +H ALL GL + +G + +K ++ R RF +FPGS L +KPP WV+ A L++T Sbjct: 701 AAYQSLHRALLAGLPTQVGHR-TEKGDFLAPRQRRFLLFPGSTLARKPPPWVLPATLLDT 759 Query: 677 SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVN 736 ++WG A I+P+WV HL+ R + +PHW RAQG V+A+E+++++GL + + V+ Sbjct: 760 QKIWGLTNAAIEPDWVIAEVPHLLARKHFDPHWSRAQGQVLASEQISLFGLVLAPKKPVH 819 Query: 737 YSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLF 796 Y +IDP+ +LF+R ALV G+ TR +F +N K+ A+ E E K RR I+ D++ Sbjct: 820 YGRIDPSAAHDLFVRQALVPGEINTRASFVVDNQKVLAQAHEEEAKLRRAGIVADEDWQA 879 Query: 797 EFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN 856 +Y RI ++ S D+WW +S E L++ L+ E + YP ++ G+ Sbjct: 880 RWYLDRIPAEIHSTAGLDAWWNALSPEQRRALHWSLVDLLP--GEGSAADRYPKYFALGD 937 Query: 857 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 916 +L L Y+FEPGA DGVT+ +P+ LLN ++ + W PG + ALI+SLPK +RR Sbjct: 938 ARLALHYRFEPGAADDGVTLEVPVHLLNALDPARLSWLAPGFVADKAAALIRSLPKALRR 997 Query: 917 NFVPAPNYAEAFL-GRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRV 975 N+VPAP++A AF +P L L R L+R TGV + D+ + HL++ R+ Sbjct: 998 NYVPAPDFARAFYEAFAQPSADDLRGELARFLQRATGVPLSPLDFDESALEPHLRMHLRL 1057 Query: 976 VDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGN 1035 D+ K L E R L++L+ + +A A + +GL + +P G Sbjct: 1058 RDETGKVLAESRDLEELRARFGDRAGRAFAARAGREMAATGLREFPLTPIPLHVP---GE 1114 Query: 1036 YKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKL 1095 V A+PALVDE DSVA+++F + + + G+RRLL + + +K ++LP K Sbjct: 1115 AGVPAYPALVDEGDSVALRIFADRAQAETEHPRGVRRLLEIALTDKLKQARKQLPVSPKT 1174 Query: 1096 GLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQ 1155 L + L D + ++ L++ + + FA + V +L ++ K Sbjct: 1175 SLLYAAIESQERLRGDLVDATLNALLEQGLDTIRDADSFAQRRDTVAKQLFGEAMERLKL 1234 Query: 1156 VEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQA 1215 E I++A + +L+ + + L D++ Q+ L+ GF+ L RYL+A Sbjct: 1235 AEAIMSAAAELKPQLESPLMGWASGNLDDMRTQLAALMPPGFLRETPAHALAQFPRYLRA 1294 Query: 1216 IEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPA----RREDEDVKEIRWMIEEL 1271 + R E+ DP RD+A+ML++ + +++ L A RR+D + +RW +EEL Sbjct: 1295 MLLRAERAKRDPARDQARMLEL-------KPFVDVLTEAAVAGRRDDPQWQALRWDLEEL 1347 Query: 1272 RVSYFAQQLGTPYPISDKRILQ 1293 RVS FAQ+LG IS K++ Q Sbjct: 1348 RVSVFAQELGAKSGISAKKLAQ 1369 >UniRef50_A9C368 ATP-dependent helicase HrpA n=13 Tax=cellular organisms RepID=A9C368_DELAS Length = 1391 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 315/518 (60%), Positives = 401/518 (77%), Gaps = 30/518 (5%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG--------- 120 +I++P++LPVS ++++I+EA+ HQV+IV GETGSGKTTQLPKI + LGRG Sbjct: 36 KISFPESLPVSARREEIMEAMDRHQVIIVCGETGSGKTTQLPKIALALGRGKVNATPDDK 95 Query: 121 --IKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 ++G LIGHTQPRR+AA +VA RIAEEL T G +GYKVRF D +S + VKLMTDGI Sbjct: 96 GQVRGHLIGHTQPRRIAASSVAKRIAEELNTPLGDVVGYKVRFQDRLSKDASVKLMTDGI 155 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE Q D LL YDT+IIDEAHERSLNIDFLLGY+K++LPRRPDLK+++TSATID ERF Sbjct: 156 LLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYIKQILPRRPDLKVVVTSATIDAERF 215 Query: 238 SRHFNN----APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGD 292 SRHF AP+I VSGRTYPVE+R+RP E+ D D AI + VDEL + GD Sbjct: 216 SRHFEGPKGPAPVIMVSGRTYPVEMRWRPFEEKRDHDLND---AIAEGVDELWAGGVSGD 272 Query: 293 ILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 IL+F+ GEREIR+ AD L K LRH E+LPL++RLS +EQ+R+F SH+GRRIVLA Sbjct: 273 ILVFLPGEREIREAADHLRKHLAQQPVLRHAEVLPLFSRLSQAEQDRIFDSHTGRRIVLA 332 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPGI+YVID GTAR+ RYS+R+KV++L +EPISQA+ANQR GRCGRV+ GI Sbjct: 333 TNVAETSLTVPGIRYVIDAGTARVKRYSFRSKVEQLLVEPISQAAANQRAGRCGRVANGI 392 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLY E DF +R FTDPEILR++LA VIL+M +LGLGD+ FPF+EAP R I DG + Sbjct: 393 CIRLYDEADFGTRARFTDPEILRSSLAGVILRMKSLGLGDVVNFPFLEAPSGRAIADGYQ 452 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL ELGA+ DE+ +L P+GR+LS+LP+DPR+ RM+LEA+ G V E ++I SALS+ Sbjct: 453 LLGELGAV--DERG---ELLPMGRELSRLPLDPRVGRMILEARTRGAVAEVLVIASALSV 507 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL 565 QD R+RP++ QQ +D++H +F D++S+F ++ LW +L Sbjct: 508 QDVRDRPLEAQQQADQQHAKFDDEKSEFSGYLRLWKWL 545 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 282/785 (35%), Positives = 427/785 (54%), Gaps = 61/785 (7%) Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIAL 626 E LS+ + +L R +++N RVREW+DI++QL VV E +N+EPA Y +H+++ Sbjct: 613 EPSHKLSNRQWEQLLRQNFINIRRVREWRDIHSQLLTVVNEHKWKINTEPAGYDAVHLSM 672 Query: 627 LTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAAR 686 L+GLL ++G K + Y GAR RF PG+ L KKP +W++ AELVETSRL+GR A Sbjct: 673 LSGLLGNLGYKGDESDAYLGARGIRFYPHPGAHLSKKPGRWIVAAELVETSRLYGRGIAA 732 Query: 687 IDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCR 746 IDP+W+E V HL+K+ +PHW + Q V+A E+ T+YGL + R+++Y +IDP R Sbjct: 733 IDPQWLEEVGAHLLKKQLLDPHWSKNQADVVALERATLYGLVVYNGRRMSYGRIDPQSAR 792 Query: 747 ELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHD 806 E+FIR ALVEG W TR F NLKL +VEELEHKSRR+D+LVDDE ++ FYDQ+I D Sbjct: 793 EIFIRQALVEGQWDTRWHFLPANLKLVRKVEELEHKSRRQDVLVDDELIYAFYDQQIPKD 852 Query: 807 VISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFE 866 V S FD W+++ ++E DLL + L++ A I+ +P G + SY Sbjct: 853 VFSGATFDHWFREAAKENADLLRLSRDELMRHEAAGITTQAFPKVVKLGGVDCTASYLHS 912 Query: 867 PGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPN--- 923 PG DG+TV +PL +LNQV + EW +PG+ ++ + AL+KSLP+ R FVP P Sbjct: 913 PGDARDGITVTVPLFVLNQVSDERVEWLVPGMLKDKLQALLKSLPQRPRSRFVPLPESAQ 972 Query: 924 -YAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKK 982 AE F + + L+D+L +++R T + V R D+ D + HL + FR+ D+ ++ Sbjct: 973 RLAELFTTPERWGQGSLIDALLKQVRDETSLDVKRADFKLDMLSPHLFMNFRITDEHGRQ 1032 Query: 983 LKEGRSLQDLKDALKGKVQ---ETLSAVADDGIEQ------------------------- 1014 L +GR+L LK L K + + L+A+ + + Sbjct: 1033 LGQGRNLGALKAELGAKARGAFQALAALKVASVTEAPAPAANAATAPETGRKPAPAAKAE 1092 Query: 1015 ------------------SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 S WSFG+LPE E RG + +PAL+D D+V I++F Sbjct: 1093 KPDQATPARNAKPSQPADSRYKEWSFGELPELMEIGRGGQTLIGFPALIDHGDAVGIEVF 1152 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 D P GLRRL L I +KYL + +P+ K+ + + P G EL + I Sbjct: 1153 DEPEVAAARHRVGLRRLFALQIRDALKYLEKNIPDLQKMAVAYMPLGTQEELREQIIDVA 1212 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 +D+ P + F + R L ++A+ IL +++K + Sbjct: 1213 IDRAFLQEPLPT-NDAQFKQRVQDGRGRLTLIANEVARMASTILVEYAAAQRKIKDTKNA 1271 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 A +D Q+ LV + F+ + +L RYL+AI RL+K DP RD +++ + Sbjct: 1272 PDAT--ADAAQQLQRLVPKNFIAAAPWTQLQHYARYLKAITSRLDKYRADPARDASRLTE 1329 Query: 1237 VENVQQAWQQWINKLPPARRE---DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 + ++Q + + + A R+ D ++E RWM+EELRVS+FAQ+L TPYP+S KR+ + Sbjct: 1330 LRPLEQRYWRLV-----AERKGHIDARMQEYRWMLEELRVSFFAQELRTPYPVSIKRLDK 1384 Query: 1294 AMEQI 1298 +Q+ Sbjct: 1385 VWQQL 1389 >UniRef50_Q87DR2 ATP-dependent helicase n=8 Tax=Xylella fastidiosa RepID=Q87DR2_XYLFT Length = 1478 Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust. Identities = 312/649 (48%), Positives = 418/649 (64%), Gaps = 71/649 (10%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPD 75 +D M RDR R + + +A FQ + + + + +RE +P +T Sbjct: 31 IDDAMTRDRGRLLGLWSRWQSQPHDHEARANFQRV---LSASRAQRQVRENNQPVVTVDT 87 Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LP++Q+ + I+ IR H VVI+AGETGSGKTTQLPK+C+ GRGI G IG TQPRR+AA Sbjct: 88 RLPIAQEAERIVALIRAHPVVIIAGETGSGKTTQLPKLCLSAGRGIAGTIGCTQPRRIAA 147 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 R VA R+AEEL+T G +G++VRF++ VSD + +K MTDGILLAE+ DR L YDTII Sbjct: 148 RAVATRVAEELQTPLGMVVGFQVRFTEKVSDASRIKFMTDGILLAEVASDRWLSAYDTII 207 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 IDEAHERSLNIDFLLGYLK+LL +R DLK+I+TSATID RFS+HF++AP+I V+GRTYP Sbjct: 208 IDEAHERSLNIDFLLGYLKQLLKKRADLKVIVTSATIDTARFSKHFDDAPVIHVAGRTYP 267 Query: 256 VEVRYRP---------------------------------------IVEEADDTERDQLQ 276 VEVRYRP IV + +R Sbjct: 268 VEVRYRPLDAMWASDDRLGEAYGGTESLAVNRWAGGSEGDGALSKPIVALPQEDQRTVND 327 Query: 277 AIFDAVDELSQES-HGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRV 335 AI +DE+++E HGD+L+F+ GEREIR+ L + R TE+LPLYARLS +Q+RV Sbjct: 328 AIVAVIDEITREDPHGDVLVFLPGEREIRELYRVLERRKYRETELLPLYARLSARDQDRV 387 Query: 336 FQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 F SGRR+VL TNVAETSLTVP I+YVIDPG AR+ RYS R K+ RL IEPISQASANQ Sbjct: 388 FNPGSGRRLVLTTNVAETSLTVPRIRYVIDPGYARVKRYSARQKLDRLYIEPISQASANQ 447 Query: 396 RKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIA------ 449 R GRCGR+++G+C RLYSE+DFL+R FTDPEI R++LA VIL+M LGLG I Sbjct: 448 RAGRCGRIADGVCYRLYSEEDFLARSAFTDPEIRRSSLAGVILRMLQLGLGRIGGSAASL 507 Query: 450 -----------------AFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 +F F+E PD+R + DG + L ELGA+ S + LT +GR+ Sbjct: 508 SEPVSGPEQQRTSWIIESFSFLEPPDERAVADGWQQLVELGAVD-----SQHVLTAIGRE 562 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 +++LPVD + ARM++ A++HGCV E +I + L +QDPRERP + ++A+D H +F D Sbjct: 563 MARLPVDVKSARMLVAARQHGCVHEMTVIAAFLGVQDPRERPPEAREAADNAHAKFADAR 622 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 S+F+ + LW + + ++ + R+ C+ +L +L +REW ++ QL Sbjct: 623 SEFVGILRLWEAYRQIRGHMTQSKLRQWCQRHFLGFLHMREWCELQLQL 671 Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 233/710 (32%), Positives = 365/710 (51%), Gaps = 36/710 (5%) Query: 607 ELGIPVNSEP--------AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 + +P N P A Y+ +H ALLTGL IG + +K ++ R RF +FPGS Sbjct: 786 QFAVPPNDAPHIGERERAAAYQALHRALLTGLPIQIGHR-TEKGDFQAPRQRRFMLFPGS 844 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 L KKPP WV+ A L++T ++WG A I+P+WV HL+ R + PHW R QG V+ Sbjct: 845 MLAKKPPPWVLAANLLDTQKVWGLTNAAIEPDWVIAELPHLLMRKHFNPHWSRTQGRVLV 904 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 +E+++++GL + + ++Y +IDP +LF+R LV G+ TR F +NLK+ + E Sbjct: 905 SEQISLFGLLLAPKKPMHYGRIDPVAAHDLFVRQGLVTGEINTRAGFVADNLKVLEQAHE 964 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEK-SMLIK 837 E K RR I+ D++ +Y R+ D+ +A DSWWK + E L + +L Sbjct: 965 EEAKLRRAGIVADEDWQARWYFDRVPSDIHTADALDSWWKGLPVEKRHGLYWSLIDLLPG 1024 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 EG E+ YP ++ G+++L L Y F+PGA DGVT+ +PL LLN ++ W +PG Sbjct: 1025 EGGEEDR---YPKYFALGDVRLPLHYSFDPGAVDDGVTLEVPLHLLNALDPVRLSWLVPG 1081 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLD----SLERELRRMTGV 953 + ALI+SLPK +RR++VPAP++A AF + + P D L R L R+TGV Sbjct: 1082 FVADKAAALIRSLPKALRRSYVPAPDFARAF---AQAFQQPSADEMRGELARFLSRITGV 1138 Query: 954 TVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIE 1013 V D+ + +L + R+ D+ + L E R L+ E A A + Sbjct: 1139 RVAAIDFDEQTLEPYLHLRVRLYDESGQVLAESRDFDALRARFGSYSGEAFVARAGRTLI 1198 Query: 1014 QSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRL 1073 L + +P Q G V +PALVD+ + A+++F +P E Q +G+RRL Sbjct: 1199 MEELREFPAVSIP---LQLTGEAGVPMYPALVDDGEMAALRIFADPTEAAQVHPHGVRRL 1255 Query: 1074 LLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEG 1133 L + + + IK ++LP +K GL + L DD + ++ ++ + Sbjct: 1256 LEIALANKIKQARKQLPVSSKSGLLYAAIESKECLRDDLVKAALNAVLAHGLESIRDPVA 1315 Query: 1134 FAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALG-LSDIKAQMGGL 1192 FA + +L + E+IL AV + L+ + M A G L D++ Q+ L Sbjct: 1316 FAQCRDVAAQQLFSEAMARLSLAEEILAAVAELKPLLEAPL-MGWARGNLDDMERQLAQL 1374 Query: 1193 VYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK----VENVQQAWQQWI 1248 VY GF+ L RYL+A+ R E+ DP RD+A+ML+ ++ ++ A Q + Sbjct: 1375 VYPGFLRQTPADVLTQYPRYLKAMMMRSERAKRDPSRDQARMLELKPFLDALEVAMAQGV 1434 Query: 1249 NKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + P + +RW +EELRVS FAQ+LG IS K++ Q + + Sbjct: 1435 SDTP-------GWETLRWDVEELRVSLFAQELGVRSGISVKKLAQRLAAL 1477 >UniRef50_B4CU07 Helicase-associated domain protein n=2 Tax=Verrucomicrobia RepID=B4CU07_9BACT Length = 1021 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 366/1047 (34%), Positives = 561/1047 (53%), Gaps = 84/1047 (8%) Query: 297 MSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 M ER+IRDT + L E++ L+ R+ +EQ R+F RR+++ATN+AETSLT Sbjct: 1 MPTERDIRDTRELLEGSLGSSFEVISLFGRMPAAEQQRIFAPSPRRRVIVATNIAETSLT 60 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 +P I+YV+D G +R+SRY+ RT+ +RLP+E +SQ+SANQR GR GRV +G CIRLY+EDD Sbjct: 61 LPRIRYVVDAGLSRMSRYNPRTRTKRLPVEDVSQSSANQRAGRAGRVQDGTCIRLYAEDD 120 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F +RP FT PEI R NLA VIL+M A LGDI FPF+ P I+ G +LL ELGA+ Sbjct: 121 FSARPRFTQPEIQRANLAEVILRMKAFRLGDIETFPFINPPVSAAIRAGYQLLHELGALN 180 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + LT LGR+L++LP+DP L RM+L+A++ + E +II + LS+ DPRERP + Sbjct: 181 DSNE-----LTSLGRELARLPIDPTLGRMLLQAREEKVLPEMLIIAAGLSVPDPRERPEE 235 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 ++A+ H+ F D +SDFL+ +N+W + + S NA RR C+ +L+ R+REW+D Sbjct: 236 AKEAAATAHKAFADPDSDFLSLLNIWRAAPDAEGRGSGNALRRFCKASFLSLSRMREWRD 295 Query: 597 IYTQLRQVVKELGIPV---NSEPAE--YREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 I+ QL + E P N +P E Y IH A+L GLL HI + ++ Y + Sbjct: 296 IHRQLADAMDE-DAPARGGNRQPEENAYPPIHRAILAGLLGHIAFRQ-ERNVYKASGERL 353 Query: 652 FSIFPGSGLFK---KP---------------PKWVMVAELVETSRLWGRIAARIDPEWVE 693 ++FPGS L++ KP P+W++ E+VETS L+ R+ A I+PEW+ Sbjct: 354 VTLFPGSNLYERRDKPKKNAAPAKPADKSRQPQWIVAGEIVETSLLFARMVAGINPEWII 413 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 + HL Y+EP+W G V+ E+V + GL I R V++ +I+P ELFIR A Sbjct: 414 DLGGHLCTFRYTEPYWSAKAGRVLVLERVLISGLEIT-RRHVDFGRIEPEKATELFIRGA 472 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 LV + + H FF EN ++R ++E + R R DE +++FY +RI+ +V S Sbjct: 473 LVAEEAKLPHRFFSENHQVREKIETALTRVRSRRAHDLDEAMYQFYAERIT-NVSSVHDL 531 Query: 814 DSWWK-KVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADAD 872 + + + +++RE PD L ++ L+ E + +P+ GN L ++Y + PG DAD Sbjct: 532 NRFVRDRIARE-PDFLCATETDLVGEDDTTYDRQLFPDQVSLGNTALPVTYAYTPGQDAD 590 Query: 873 GVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV 932 GVTV +PLP+ +Q+ +W +PGLR E + L+++LPK VR+ +P + Sbjct: 591 GVTVRVPLPVASQLTTGQIQWMVPGLREEQIGVLLRALPKTVRKTLMPLEPKVREIVAEF 650 Query: 933 KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDL 992 +P L +L L R V V EDW +P HL+ V+D NK + GR L Sbjct: 651 QPGRGDFLTALADFLSRKYRVMVRAEDWPPQSLPTHLQPRVEVIDRGNKTVAAGRDL--- 707 Query: 993 KDALKGKVQ--ETLSAVADDGI---EQSGLHIWSFGQLPES-YEQKRGNYKVKAWPALVD 1046 +A++ +VQ + + D + E+ GL WS G LPES ++ G + A+P L Sbjct: 708 -EAIQAQVQKHDVRTDAWDKAVRKWERRGLTTWSIGDLPESVVVEEVGGAPLLAYPGLAL 766 Query: 1047 ERDSVAIKLFDNPLEQKQAMWNGLRRLL-------LLNIPSPIKYLHEKLPNKA------ 1093 V ++LF E ++A G+RRL L + + L + LP A Sbjct: 767 REGEVDVRLFRQREEAEKASRQGVRRLAELILARDLTRVWKELAGLAKHLPTHAPRQAAN 826 Query: 1094 ------KLGLYFNPYGKVL---ELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 ++ P + L +D ++ TE F A+ E R E Sbjct: 827 FHSALQQMSAKLQPAAPFVTPEALQKSAYQHLLDHVLQLTPVFPLTEARFLAMAETARRE 886 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 L I +V Q+ F++ ++L + + LV F+ Sbjct: 887 LPGLTYQIGDRVRQL----FDLREKL-----LASPKRYPGFDQDLQRLVPGDFLARTPHA 937 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 +L RYL+A++ R E+ ++P +D + ++E + +W +++P A++E Sbjct: 938 QLPHLHRYLRAMQVRAERAVLNPAKDAEKAKQLE----PFARWESRVPEAQQET-----F 988 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRI 1291 RWM+EE RVS FAQ+LGT P S +R+ Sbjct: 989 RWMLEEFRVSLFAQELGTAQPASAQRL 1015 >UniRef50_C9RLX0 Helicase-associated domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLX0_FIBSS Length = 1348 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 339/928 (36%), Positives = 525/928 (56%), Gaps = 91/928 (9%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL--------GRGI 121 +I YP+ LPV + +++ + + HQV+IV +TGSGK+TQLPK +E GR Sbjct: 7 KIEYPE-LPVVEHREEFFDLLEKHQVIIVKADTGSGKSTQLPKFLLEWFIAKTRDEGRET 65 Query: 122 KGL----------------------IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVR 159 + IG T+PRRLAA ++A+R+ EELK E + K+R Sbjct: 66 REAAAHTSKGEARAHTSEHEVRLFKIGVTEPRRLAAISIADRLREELKDEE--LVSTKIR 123 Query: 160 FSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR 219 F + ++ +K+MTDGILL E ++DRL QY+ I+IDEAHERSLNID LLG K +L R Sbjct: 124 FWEQGTNEAPIKVMTDGILLQEFRKDRLFRQYNAIMIDEAHERSLNIDILLGIFKTVLSR 183 Query: 220 RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRY-----------RPIVEEAD 268 RPD K+I+ SAT+D + F ++N+ ++E GRTYPV+V Y R I + D Sbjct: 184 RPDFKLIVASATLDAKLFEEFYDNSCVMEAEGRTYPVDVEYYFSDYGSASALRDISGKGD 243 Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL-NKLNLRHTEILPLYARL 327 ++ + DA+ +L +L F+ ER+I+D L ++L+ ++LPLY R+ Sbjct: 244 SGLIEEAR---DAILDLETRHRDHLLCFLPTERDIQDLMGELAHELDAATFDVLPLYGRM 300 Query: 328 SNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP 387 S EQ R+F+ R+VLATN+AETSLT+PGI YV+D G ARISRY+ + ++Q LP+E Sbjct: 301 SPDEQRRIFKHTGKTRVVLATNIAETSLTIPGIAYVVDTGMARISRYNAQARIQGLPVEE 360 Query: 388 ISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGD 447 IS+ASA QR GR GRV G+CIRLYS ++F R EFT+PEI R+NLA+V+LQ+ +LGL + Sbjct: 361 ISKASARQRTGRAGRVKPGVCIRLYSPENFEKRDEFTEPEIRRSNLANVVLQLRSLGL-E 419 Query: 448 IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVL 507 + FPF+++P + + L ELGA+T D +S Y +T LGR +++LP+D L+ ++L Sbjct: 420 LENFPFLQSPPHSAFRGAYKTLFELGALTAD-NSSGY-VTKLGRDMTRLPMDVSLSAVLL 477 Query: 508 EAQKHGCVREAMIITSALSIQDPRERPMDKQQAS--DEKHRRFHDKESDFLAFVNLWNYL 565 A+ G ++ A+I+ SALSIQDPR P D+ + + + HR+F +SDFL +V++WN Sbjct: 478 RARDLGVLQPALIVCSALSIQDPRVVPNDEPERTRIRQLHRKFCGHKSDFLVYVSMWNAF 537 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK-ELGIPVNSEPAEYRE-IH 623 S N R+ C + +++LR+REW D+Y Q ++++ + V + +R+ +H Sbjct: 538 CTDWDGKSWNKLRKFCDKNSMHFLRLREWVDLYEQFSRILEVKFENKVCPFDSFHRDNLH 597 Query: 624 IALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRI 683 IALL+G L I +D + Y +FPGS L+ K +W+ AE+ ETSR + Sbjct: 598 IALLSGFLGGIAHRDIENGCYRLVSGRETHVFPGSDLYAKSVEWLFSAEVRETSRTFLTK 657 Query: 684 AARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPA 743 AA I PEW+ VA+ R + EP W + +G V A E+V+ GL I +V+Y++++P Sbjct: 658 AAEIKPEWILQVAEPFCTRRWFEPTWNKERGFVEAVEEVSFRGLVISRGHRVDYARVNPE 717 Query: 744 LCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRI 803 C ++F R A+V G+ F + N + + LE + R+ + ++ L E+Y RI Sbjct: 718 DCAQIFWREAVVMGEVARPFDFMKHNDHVVENLHALEARKRQFGLAPSEDALVEYY-TRI 776 Query: 804 SHDVISAR--------HFDSWWKKVSRETPDLLN---FEKSMLIKEGAEKISKL-DY--- 848 + +V S + H D + K + DLL+ S+ K+ +KL D+ Sbjct: 777 AGNVNSIKTLKSYIYEHTDQFLKFDEKYWLDLLDERTLAGSLQTKDERGFGTKLSDFLPK 836 Query: 849 --------------PNF------WHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEE 888 P + G + F+ D DG+T+ +P LL ++ Sbjct: 837 QSQTSKARSADPIAPTLGGSIEHFRIGERVVTGEMVFDATRDCDGITLSLPYDLLTEISP 896 Query: 889 SGFEWQIPGLRRELVIALIKSLPKPVRR 916 + F I R ++ ++I+ +PK V++ Sbjct: 897 AKFAMSIQQWREWMIESVIREMPKSVKK 924 >UniRef50_UPI0001BCCC41 ATP-dependent helicase HrpA n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCCC41 Length = 622 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 266/636 (41%), Positives = 374/636 (58%), Gaps = 21/636 (3%) Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 PGSGL KKPP WVM ELVET+RLW R AR+ PEW+E A HL+KR Y+EPHW +GA Sbjct: 1 PGSGLAKKPPAWVMAGELVETNRLWARSVARVQPEWIEEAAAHLVKRQYAEPHWSIKRGA 60 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 VMA E+VT+YGLP+VA R V Y +IDP + RELFIRHALV+G+W+T H F+ N L E Sbjct: 61 VMARERVTLYGLPVVADRLVQYGRIDPEVSRELFIRHALVQGEWRTHHHFWDRNQALVTE 120 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSML 835 V+ELE + RRRD+ DD+TL FYD+RI +V+S RHFD+WWKK R +PDLL+ + ML Sbjct: 121 VDELEDRLRRRDLRADDDTLCAFYDERIPAEVVSVRHFDAWWKKTRRNSPDLLDLTREML 180 Query: 836 IKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQI 895 + + + + ++P WH L+Y FEPGAD DGVTV +PL L V++ F W + Sbjct: 181 LADSPD--ADAEFPREWHSDGESYPLTYAFEPGADVDGVTVDVPLARLLAVDDRAFAWHV 238 Query: 896 PGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTV 955 PG R ELV LI+SLPK +RR FVPA +A + + P L L R++R + G V Sbjct: 239 PGHRVELVTELIRSLPKRLRREFVPAGQFAPRLVAAMDPGSDDLTAELARQMRLLNGTVV 298 Query: 956 DREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQS 1015 D +D+ +PDHL++TFRVV D + +L G++L L++ L ++ L+AVA E++ Sbjct: 299 DADDFDVSALPDHLRVTFRVV-DGDSELARGKNLSALREQLTTHLRADLTAVARQE-ERT 356 Query: 1016 GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 GL W G L + +V +PALVDE SVA+++ D+ EQ AM G RLL Sbjct: 357 GLRRWEVGTLEPTLRAG----QVTGYPALVDEGSSVALRILDSEAEQTAAMVRGQARLLS 412 Query: 1076 LNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 +PSP+ + L AKL L P+ +I++C +D L+ +GGPV E + Sbjct: 413 FALPSPVPGIGRTLDLHAKLLLSTGPHRDAAAVIEECWLAALDALVVRHGGPVRDERSYD 472 Query: 1136 ALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYR 1195 AL E VR E+ D + E+ + ++ + V + D++ Q+ LV+ Sbjct: 473 ALREWVRGEMFD-------ETERAVRTSLDVLRAYGELVPLPKTEAGEDVRVQLSWLVHP 525 Query: 1196 GFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR 1255 GF+ G +L YLQA +RL+ D ++ + ++ + + L Sbjct: 526 GFIRDAGTAQLRRLPVYLQAARRRLDTPLTD------DLVAAQELEARFHERTAGLGTWA 579 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 R DV+ +RW +EELRVS AQQL T +P+S KR+ Sbjct: 580 RLAPDVQHVRWALEELRVSLLAQQLRTAFPVSVKRV 615 >UniRef50_A2EVN8 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EVN8_TRIVA Length = 1006 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 242/637 (37%), Positives = 374/637 (58%), Gaps = 28/637 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+S + I++ + ++V I+ GETG GKTTQ+P+ + G +IG TQPRR+AA Sbjct: 347 LPISDYESQIIDMLSKNRVFILVGETGCGKTTQIPQFLLRSGIAGDLMIGVTQPRRVAAI 406 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+A+E + G IGY+VRF + S NT VK MTDG+LL E DR L Y I++ Sbjct: 407 SVAKRVADETNSIIGDLIGYQVRFEEKTSRNTKVKFMTDGMLLKECLGDRQLSNYGVIML 466 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+++ D L G +KELL + LK+I+TSAT+ E+FS F N P++EV GRT+PV Sbjct: 467 DEAHERTIHTDVLFGLMKELLSKDDRLKVIVTSATLQKEKFSSFFFNCPVLEVPGRTFPV 526 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQ--ESHGDILIFMSGEREIRDTADALNKL- 313 + A D LQA + V +L Q E GDIL+F++G+ +I + + + Sbjct: 527 TTSF------AVTAFTDYLQASVNTVLKLHQTEEKPGDILLFLTGQDDIDTACEQIYQRS 580 Query: 314 -----NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDP 366 N +LP+Y+ L +Q +FQ R++V+ATN+AETS+T+ GI+YV+DP Sbjct: 581 KPMEENFGKLIVLPIYSSLPTEQQTMIFQPTPPGQRKVVVATNIAETSITIDGIRYVVDP 640 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFTD 425 G + RY RT + L + PIS+A+ANQRKGR GR + G CIRLY+ED + + E T Sbjct: 641 GLVKEMRYDPRTGMDTLEVVPISKAAANQRKGRAGRTAAGKCIRLYTEDSYNNEMKETTI 700 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI R+N+A V L M +G+ D+ F F++ P + I D + L LGA+ DE+ + Sbjct: 701 PEIQRSNMAMVALDMKVIGIDDLIGFDFMDKPPTKIIIDALDQLYTLGAL--DEEGN--- 755 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LTPLGR +S+ ++P+LA+M++ + GC E +++ + LS+Q RP KQ +D Sbjct: 756 LTPLGRDMSKFSLNPQLAKMLIMSSMLGCSEEVLVLVAILSVQGIWYRPRKKQAEADAMK 815 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 R + E D + ++++ E QK A+ C+ +Y++Y ++ +D+ TQLRQ + Sbjct: 816 ARLNRDEGDHMTLLHVFR---EWQKNGEREAW---CKENYVHYRSLKRAKDVMTQLRQQM 869 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 ++ +P+ S E I A+++G + + + T + IFPGS LF + P Sbjct: 870 EQFHVPLVSCGKEIIPILKAIVSGFFAKAARRYMGTEYKTIVDDHPVYIFPGSALFGREP 929 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 ++ + ELV T+R + R +DP W+ +A ++ Sbjct: 930 EYCVFHELVNTTREYMRNTVAVDPRWLVELAPAFYRK 966 >UniRef50_C8PMN0 ATP-dependent RNA helicase HrpA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMN0_9SPIO Length = 898 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 245/640 (38%), Positives = 370/640 (57%), Gaps = 31/640 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LPV ++K ILE++ HQV++V TGSGKTTQLP I E G G+IG TQPRR+AA Sbjct: 7 LPVYEQKARILESLERHQVIVVESPTGSGKTTQLPVILHEAGYTQTGIIGVTQPRRIAAL 66 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +V+ IA +L+ G +GYK+RF DH S +T +K+MTDGILL E++ D L +Y I++ Sbjct: 67 SVSEFIANQLRVPLGELVGYKMRFEDHTSPDTKIKIMTDGILLQELKLDPWLSKYSVIMV 126 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLNIDF+LG LK +L R D K+II+SATI+ + FS +FN P+I++ TYPV Sbjct: 127 DEAHERSLNIDFILGLLKRILQERQDFKVIISSATINTDMFSMYFNECPVIKIDAMTYPV 186 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDE-----LSQESHGDILIFMSGEREIRDTADALN 311 + + P A A+ D + LS+ G IL+F+ GER I+D + L+ Sbjct: 187 TLIFDPPALTASTETLAAETALLDKIAVIVGRILSEGRPGAILVFLPGERAIKDCIERLS 246 Query: 312 KLN-LRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGT 368 R LPLY RLS EQ RVF+S ++IV+ATN+AETS+T+ I VID G Sbjct: 247 HEPWFRKLYPLPLYGRLSKEEQERVFKSPPFGKKKIVIATNIAETSITINDIAAVIDSGL 306 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 ++++ Y+ T L P+S+AS NQR+GR GR EG+C RLY+ DF +R +T EI Sbjct: 307 SKLNFYNPFTYTSSLDEAPVSKASCNQRRGRAGRTQEGVCYRLYTRKDFETRVMYTTEEI 366 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 RT+L+ V+++M LG+ D A F F+ P K+ I V L LGA+ +D L+ Sbjct: 367 YRTDLSEVVMRMAELGIYDFANFDFISPPGKKGIIGAVDTLNMLGALESDNS-----LSK 421 Query: 489 LGRQLSQLPVDPRLARMVLEAQKH--GCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 +G+ + P+ PR +RM++EA + + + +I LS + P P ++ + + H Sbjct: 422 IGQMMCLFPLSPRQSRMIVEAVLYYPESIEDVLIAAGFLSARSPFLFPDGQELEARKAHA 481 Query: 547 RFHDKESDFLAFVNLW-NYL-GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 F D DF++F+ ++ Y+ E QK R C YL+ + E +I QL + Sbjct: 482 AFRDPLGDFVSFLKVYRQYMQAENQK--------RFCERSYLDERIMAEIANIKEQLELI 533 Query: 605 VKELGIPVNS--EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662 V ++G+P+ S +P++Y A+ G++ + + Y + SI PGS ++K Sbjct: 534 VSDMGVPILSGGKPSDYL---TAVARGMIQFVCAAQG-RDVYRSLTTEKISIHPGSCMYK 589 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 + P +++ E+V TSR++ + + + V VA L+ + Sbjct: 590 ERPSYIVAGEIVHTSRMYAMSVSPLSKDIVALVAPALLGK 629 >UniRef50_C5KUX0 ATP-dependent RNA helicase DHX8, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUX0_9ALVE Length = 1239 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 239/644 (37%), Positives = 383/644 (59%), Gaps = 38/644 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LP+ + + +L+A+ ++QV+IV GETGSGKTTQ+ + E G G+IG TQPRR+A Sbjct: 582 EGLPIFKLRSQLLQAMAENQVLIVIGETGSGKTTQMTQYMAEAGYADHGIIGCTQPRRVA 641 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A TVA R+AEE G +GY +RF DH S T +K MTDG+LL E D LL +Y I Sbjct: 642 AITVAKRVAEEYGCRLGQEVGYTIRFEDHTSPETRIKYMTDGMLLREALADPLLKKYSVI 701 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L G KE + R DLK+I+TSAT+D E+FSR+F ++ I + GRT+ Sbjct: 702 MLDEAHERTIHTDVLFGLCKEAIRERNDLKLIVTSATLDAEKFSRYFFDSHIFTIPGRTF 761 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL 313 PVE+ Y +++ E D +QA V ++ E GDIL+F++G+ EI DTA L L Sbjct: 762 PVEILY------SNEPEEDYVQAALMTVMQIHLTEQPGDILVFLTGQEEI-DTACQL--L 812 Query: 314 NLRHTEILPL----------YARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIK 361 + R ++ P+ YA + Q+ +F+ R+ V+ATN+AE S+T+ GI Sbjct: 813 DERMAQLAPMNPPPLIPMGVYAAQPSEVQSSIFEPAPPGSRKCVVATNIAEASITIDGIY 872 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR- 420 +V+DPG A+I ++ +T++ L + PISQA+A QR GR GR G C RLY+E F + Sbjct: 873 FVVDPGFAKIKTFNAKTQMDALIVTPISQANARQRAGRAGRTGPGKCYRLYTEKAFRTEM 932 Query: 421 -PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 P PEI R+NL++V+L + A+G+ D+ F F++AP + + + + L +LGA+ D+ Sbjct: 933 LPSAV-PEIQRSNLSNVVLTLKAMGINDLLGFDFMDAPPVQTLINSLEALWQLGAL--DD 989 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 + LT LGR++++ P+ P ++M+L + GC EA+ + + LS+Q+ RP DKQ Sbjct: 990 EG---LLTKLGRKMAEFPMPPEQSKMLLASVDLGCADEAITVVAMLSVQNVFYRPKDKQA 1046 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVREWQDIY 598 +D+K +F+ E D + + ++ KA S N F C +++ +R+ QD+ Sbjct: 1047 VADQKKSKFNSPEGDHVTLLEVY-------KAWSRNRFSAPWCYENFIQVRSLRKAQDVR 1099 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QL ++ + +NS +Y + A+ G +++ +D ++ + I P S Sbjct: 1100 KQLIGIMDRYRLEINSCGQDYNRLRQAIAAGYFNNLCRRDPNEGYRVMRDLQQVYIHPSS 1159 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 L++K P+WV+ ELV T+R + R ++PEW+ +A ++ K+ Sbjct: 1160 ALYQKNPEWVIYYELVMTTREYIREVCTVEPEWMPKIAPNMFKQ 1203 >UniRef50_B6ADS3 DHX8/prp22-type ATP-dependent RNA helicase, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6ADS3_9CRYT Length = 1078 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/638 (36%), Positives = 369/638 (57%), Gaps = 29/638 (4%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134 NLP+ ++ +++A+R +Q+++V GETGSGKTTQ+ + E G G +IG TQPRR+A Sbjct: 422 NLPIFALRESLVDAVRKNQIIVVIGETGSGKTTQITQYLYEEGFCDDGNMIGCTQPRRVA 481 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A+E+ G +G+ +RF D S T +K MTDG+LL E D L +Y+ I Sbjct: 482 ATSVARRVAQEVGCTIGSTVGFSIRFEDVTSSETRIKYMTDGMLLREALSDHSLSKYNVI 541 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER++ D L G LK RP ++I+TSAT++ ++FSR+F N I + GRT+ Sbjct: 542 MLDEAHERTITTDVLFGLLKATCIERPSFRLIVTSATLEADKFSRYFMNCNIFAIPGRTF 601 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK- 312 PVE+ Y + E D ++A V ++ +E GDIL+F++G+ EI + L++ Sbjct: 602 PVEILY------TREPESDYVEAALLTVLQIHLREPPGDILVFLTGQEEIDNACRTLHER 655 Query: 313 ------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVI 364 LN ILP+Y+ + Q+ +F+ R+ V+ATN+AE SLT+ GI +VI Sbjct: 656 MQKLENLNPPPLIILPVYSSQPSEVQSLIFEPTPEGCRKCVIATNIAEASLTIDGIYFVI 715 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EF 423 DPG A++ ++ +T + L + PISQASA QR GR GR G C RLY+E F + Sbjct: 716 DPGFAKMMVFNSKTGMDSLVVAPISQASARQRSGRAGRTGPGKCYRLYTEIAFKTEMLPV 775 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 T PEI RTNL++ +L + ALG+ D+ F F++ P + + L EL A+ D+ Sbjct: 776 TIPEIQRTNLSNTVLLLKALGINDLLNFDFMDPPPPHTLLIALETLYELDAL--DDNGI- 832 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 LT LGR++++LP+ P L++MVL + GC E + ITS LS+Q+ RP DKQ A+D Sbjct: 833 --LTRLGRKMAELPMSPNLSKMVLSSVDLGCSDEIITITSMLSVQNVFYRPKDKQAAADR 890 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 +FH D L ++N++N Q+ ++ C ++L +++ QD+ QL Sbjct: 891 HKSKFHHSYGDHLTYLNIYNSWQRQRYSVP------WCYENFLQSRSLKKAQDVRKQLIS 944 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 + + + + S +Y +I A+ G SH KD+ + + N + + P S LF K Sbjct: 945 IFDKYQLNIISARNDYDKIRKAICAGFFSHACKKDSQEGYRSLVDNQQVYLHPSSTLFNK 1004 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 P+W++ ELV T++ + R I P W+ +A +L + Sbjct: 1005 SPEWLLYHELVFTTKEYIRDCCTIQPNWLVELAPNLFQ 1042 >UniRef50_C4M6S9 Helicase, putative n=3 Tax=Entamoeba RepID=C4M6S9_ENTHI Length = 953 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/637 (36%), Positives = 378/637 (59%), Gaps = 27/637 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + ++E+I+ +Q++I+ GETG GKTTQL + E G G IG TQPRR+AA Sbjct: 293 LPIYSMRNKLMESIKKNQIIILIGETGCGKTTQLTQYLDEDGYSKNGRIGCTQPRRVAAI 352 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +V+ R+AEE+K + G +GY +RF D ++ T +K MT+G+LL E DR L QY +I+ Sbjct: 353 SVSQRVAEEMKVKLGEEVGYSIRFEDKTTEKTRIKYMTNGMLLREYLVDRDLPQYKVLIL 412 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER++ ID L G LKE + RRP+ K+IITSAT+D ++FS +FN APII + GRT+PV Sbjct: 413 DEAHERTVGIDILFGLLKETIKRRPEFKLIITSATLDADKFSIYFNKAPIIHIPGRTFPV 472 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN---- 311 E Y ++ E D +Q+ + + ++ + GDIL F++G+ EI T +N Sbjct: 473 EKLY------LEEPEMDYIQSGIETIMKIHLTQPPGDILFFLTGQEEIDSTCSIINEKVQ 526 Query: 312 KLNLRHTEI--LPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPG 367 KL+ R+ ++ LP+YA LS +Q R+F+ R+ ++ATN+AETS+T+ GI +V+D G Sbjct: 527 KLDKRYPKLIALPIYASLSTEQQKRIFEPAPPFTRKCIVATNIAETSITIDGIYFVVDSG 586 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFTDP 426 + ++ R + +L I PISQA A+QR GR GR G C RLY+E +L+ P + P Sbjct: 587 FVKQKVHNPRLGMDQLLITPISQACADQRAGRAGRTGPGKCYRLYTEKAYLNEMPIVSIP 646 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI R NLA +L + A+G+ ++ F +++ P + + L + A+ D KL Sbjct: 647 EIQRANLADTVLILKAIGINNVIDFDYMDPPMHNTLISALHHLYAISALDDDG-----KL 701 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T LGR++++ P++P LA+M++ +++ GC E + I +ALS+ + RP +K++ +D + R Sbjct: 702 TQLGRKMAEFPLEPPLAKMLIVSEQFGCSEEVVTIVAALSVGNLFIRPKEKEEEADRRKR 761 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK 606 + D L + ++N + K+ S C+ +Y+N+ + + +DI QL +++K Sbjct: 762 QLSSSAGDHLTMLQVYNNWIKNGKSPS------WCKENYINFRSLYKCEDIRKQLIKIMK 815 Query: 607 ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPK 666 + I + S I ++++G H +D + T + I P S LF + P+ Sbjct: 816 KYHIQLISSHNNPIPIIKSIVSGFFVHAAKRDPQEGYRTLVDGQQVFIHPTSSLFGRNPE 875 Query: 667 WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 WV+ ELV T++ + R IDP+W+ +A +++ Sbjct: 876 WVVYHELVLTTKEYMREIIAIDPQWLIELAPAFYQKS 912 >UniRef50_Q14562 ATP-dependent RNA helicase DHX8 n=78 Tax=Eukaryota RepID=DHX8_HUMAN Length = 1220 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/638 (37%), Positives = 364/638 (57%), Gaps = 29/638 (4%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LP+ + K+ +++A+ D+Q++IV GETGSGKTTQ+ + E G +G IG TQPRR+A Sbjct: 563 ESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVA 622 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R++EE G +GY +RF D S T++K MTDG+LL E D L QY I Sbjct: 623 AMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAII 682 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L G LK+ + +R D+K+I+TSAT+D +FS++F API + GRTY Sbjct: 683 MLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 742 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL 313 PVE+ Y + E D L A V ++ E GDIL+F++G+ EI + L + Sbjct: 743 PVEILY------TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYER 796 Query: 314 ------NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVID 365 ++ ILP+Y+ L + Q R+F R++V+ATN+AETSLT+ GI YV+D Sbjct: 797 MKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVD 856 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 PG + Y+ +T + +L + PISQA A QR GR GR G C RLY+E + T+ Sbjct: 857 PGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTN 916 Query: 426 -PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI RTNLAS +L + A+G+ D+ +F F++AP + + L LGA+ D++ Sbjct: 917 VPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGAL--DDEGL-- 972 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT LGR++++ P++P L +M++ + GC E + I S LS+Q+ RP DKQ +D+K Sbjct: 973 -LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQK 1031 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVREWQDIYTQLRQ 603 +FH E D L + ++N + +N F C +++ +R QDI Q+ Sbjct: 1032 KAKFHQTEGDHLTLLAVYN-------SWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLG 1084 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 ++ + V S + A+ +G + KD + T I P S LF + Sbjct: 1085 IMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR 1144 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 P+WV+ ELV T++ + R IDP W+ A K Sbjct: 1145 QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1182 >UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=10 Tax=Saccharomycetaceae RepID=PRP22_YEAST Length = 1145 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/635 (36%), Positives = 371/635 (58%), Gaps = 27/635 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LPV + ++++A+RD+Q +++ GETGSGKTTQ+ + E G G+IG TQPRR+AA Sbjct: 483 LPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV 542 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+AEE+ + G +GY +RF D +T +K MTDG+L E D + +Y I++ Sbjct: 543 SVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIML 602 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER++ D L LK+ +RP+LK+I+TSAT++ +FS +F N PII + G+T+PV Sbjct: 603 DEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPV 662 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-- 313 EV Y + + D ++A D V ++ E GDIL+F++G+ EI + L Sbjct: 663 EVLY------SQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVK 716 Query: 314 ----NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 ++ ILP+Y+ L + Q+++F+ R++V ATN+AETS+T+ GI YV+DPG Sbjct: 717 TLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPG 776 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EFTDP 426 A+I+ Y+ R +++L + PISQA ANQRKGR GR G C RLY+E F + E T P Sbjct: 777 FAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVP 836 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI R NL+ IL + A+G+ D+ F F++ P K + + + L L ++ D++ KL Sbjct: 837 EIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSL--DDEG---KL 891 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T LG+++S P+DP L+R +L + + C E + I S LS+Q+ RP D+Q +D K Sbjct: 892 TNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKA 951 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK 606 +FH D L +N++ + +N + C+T++L++ ++ +D+ +Q+ + K Sbjct: 952 KFHHPYGDHLTLLNVYT------RWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFK 1005 Query: 607 ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPK 666 ++G+ + S ++ I ++G + +D+ T I P S L+ K + Sbjct: 1006 KIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYE 1065 Query: 667 WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 +VM +V TSR + I+P+W+ VA H K Sbjct: 1066 YVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYK 1100 >UniRef50_P53131 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 n=167 Tax=Eukaryota RepID=PRP43_YEAST Length = 767 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/647 (36%), Positives = 377/647 (58%), Gaps = 44/647 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM--ELGRGIKGLIGHTQPRRLA 134 LPV ++ + L+ +++Q+++ GETGSGKTTQ+P+ + E+ + TQPRR+A Sbjct: 93 LPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVA 152 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+AEE+ + G +GY +RF + S+ T++K MTDG+LL E +D L +Y I Sbjct: 153 AMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCI 212 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHER+L D L+G LK+++ RRPDLKIII SAT+D E+F R+FN+AP++ V GRTY Sbjct: 213 ILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTY 272 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALNKL 313 PVE+ Y P + +RD L + V ++ + E GDIL+F++GE EI DA+ K+ Sbjct: 273 PVELYYTP------EFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIE---DAVRKI 323 Query: 314 NLRHTEIL-----------PLYARLSNSEQNRVF----QSHS---GRRIVLATNVAETSL 355 +L +++ PLY L +Q R+F +SH+ GR++V++TN+AETSL Sbjct: 324 SLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSL 383 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+ GI YV+DPG ++ Y+ R +V+ L + PIS+ASA QR GR GR G C RLY+E+ Sbjct: 384 TIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 443 Query: 416 DFLSR-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 F E + PEILR+NL+S +L++ LG+ D+ F F++ P + +R LEEL Sbjct: 444 AFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETM---MRALEELNY 500 Query: 475 ITT-DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 + D++ + LTPLGR SQ P+DP LA M++ + + C +E + I + LS+ + R Sbjct: 501 LACLDDEGN---LTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIR 557 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P ++ +D+ F + D + +N+++ + + CR YLNY + Sbjct: 558 PTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAY--EYGIHKWCRDHYLNYRSLSA 615 Query: 594 WQDIYTQLRQVVKELGIPVNS----EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 +I +QL +++ + +N+ P + I AL +G + K + + Y ++ Sbjct: 616 ADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKD 675 Query: 650 ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 + + S + +WV+ E V TS+ + R + PEW+ +A Sbjct: 676 NQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIA 722 >UniRef50_Q09530 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 n=44 Tax=Eukaryota RepID=MOG5_CAEEL Length = 1200 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/641 (36%), Positives = 369/641 (57%), Gaps = 35/641 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LP+ K++++EA+ D+Q+++V GETGSGKTTQ+ + +E G G +G IG TQPRR+A Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVA 597 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+AEE + G +GY +RF D S +T++K MTDG+LL E D L Y I Sbjct: 598 AMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLI 657 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L G LK +RP+LK+IITSAT+D +FS +F API + GRT+ Sbjct: 658 MLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTF 717 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL 313 PVE+ Y + E D L+A V ++ E GD+L+F++G+ EI + + L + Sbjct: 718 PVEILY------TREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYER 771 Query: 314 ------NLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVID 365 ++ ILP+Y L + Q R+F R++V+ATN+AETSLT+ GI YV+D Sbjct: 772 MKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVD 831 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE----DDFLSRP 421 PG + Y+ ++ + L + PISQA+A QR GR GR G C RLY+E D+ L P Sbjct: 832 PGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTP 891 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PEI RTNLAS +LQ+ A+G+ ++ F F++AP ++ + L L A+ D Sbjct: 892 V---PEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL- 947 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 LT LGR++++ P++P L+++++ + GC E + I + L++Q+ RP +KQ + Sbjct: 948 ----LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHA 1003 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVREWQDIYTQ 600 D+K +FH E D L + ++N + ++ F + C +++ ++ QDI Q Sbjct: 1004 DQKKAKFHQPEGDHLTLLAVYN-------SWKNHHFSQPWCFENFIQVRSMKRAQDIRKQ 1056 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L ++ + + S + + A+ +G + +D + T I P S Sbjct: 1057 LLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSAC 1116 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 F++ P+WV+ ELV T++ + R IDP+W+ A K Sbjct: 1117 FQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFK 1157 >UniRef50_Q6BRT9 DEHA2D13882p n=8 Tax=Saccharomycetales RepID=Q6BRT9_DEBHA Length = 1147 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 231/644 (35%), Positives = 368/644 (57%), Gaps = 33/644 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG----RGIKGLIGHTQP 130 ++LP+ + D+++A+R++Q +++ GETGSGKTTQ+ + E G + +IG TQP Sbjct: 478 ESLPIFPMRADLIKAVRENQFLVIVGETGSGKTTQIVQYLAEESLDKVEGEQKIIGCTQP 537 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA +VA R+AEE + G +GY +RF D S +T +K MTDG+L E D L+ + Sbjct: 538 RRVAAVSVAKRVAEEYGCKVGEDVGYTIRFEDKTSKDTRMKYMTDGMLQREALNDPLMSR 597 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y I++DEAHER++ D L LK+ + P+LKIIITSAT+D +FS +FN+ PI+ + Sbjct: 598 YSVIMLDEAHERTIATDVLFTLLKKAVANNPNLKIIITSATLDANKFSNYFNSCPIVRIP 657 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADA 309 GRTYPV++ Y + E D L + D+V ++ E GDIL+F++G+ EI + +A Sbjct: 658 GRTYPVDILY------TREPEMDYLSSALDSVIQIHISEPEGDILVFLTGQEEIDTSCEA 711 Query: 310 LNKL------NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIK 361 L + + ILP+Y+ L + Q+++F++ R+++LATN+AETS+T+ GI Sbjct: 712 LYERMKILGDTVPELIILPVYSALPSEMQSKIFEATPPGSRKVILATNIAETSITIDGIY 771 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR- 420 YV+DPG +I+ Y + + L I PISQA ANQR GR GR G C RLY+E F + Sbjct: 772 YVVDPGFVKINAYDSKLGMDSLTISPISQAQANQRSGRAGRTGPGKCYRLYTESAFKTEM 831 Query: 421 -PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 P T PEI R NL+ IL + A+G+ D+ F F++ P + + ++ L L A+ D Sbjct: 832 LPN-TVPEIQRQNLSHTILMLKAMGINDLLNFEFMDPPPTNTMMNALQDLYTLSALDDD- 889 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 Y LT LGR++++ P++P LA+ ++ + GC E + I + LS+Q RP DKQ+ Sbjct: 890 ---GY-LTKLGRKMAEFPMEPALAKTLIISVDFGCSDEILTIVAMLSVQTVFYRPKDKQK 945 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +D+K RFH + D L +N++ + +L+ N ++ C +Y+ ++ Q++ Sbjct: 946 QADQKKYRFHHQYGDHLTLLNVY-----RSWSLNGNN-KQWCVENYIQDRSMKRAQEVRK 999 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 QL ++ + P+ S + AL G H +D + T + P S Sbjct: 1000 QLVLIMSKYRHPIISCGPNIDRVRKALCAGFFKHSSKRDPQEGYKTLVEQTPVHLHPSSA 1059 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 LF K P +V+ L+ TS+ + ID +W+ +A K+T Sbjct: 1060 LFGKSPDYVIYHTLLLTSKEYMHCVTVIDAKWLLELAPGFFKKT 1103 >UniRef50_A0D4B2 Chromosome undetermined scaffold_37, whole genome shotgun sequence n=4 Tax=Oligohymenophorea RepID=A0D4B2_PARTE Length = 1059 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/626 (37%), Positives = 368/626 (58%), Gaps = 27/626 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LPV + ++++ + D++V I+ GETGSGKTTQL + E G G+IG TQPRR+AA Sbjct: 317 LPVFHCRSELVQLLHDNRVCIIVGETGSGKTTQLTQYLYEEGYTNTGVIGCTQPRRVAAV 376 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+AEE+ E G +GY +RF D+ S +T++K MTDG+LL E QD L +Y +I+ Sbjct: 377 SVAKRVAEEMGVELGSKVGYAIRFEDYTSKDTVIKYMTDGVLLRESLQDPDLEKYSAVIM 436 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLN D L G LK++ RR D++I+ITSAT++ ++FS F PI ++ GRT+PV Sbjct: 437 DEAHERSLNTDVLFGILKKVAQRRRDIRIVITSATMNAKKFSDFFGGVPIYKIPGRTFPV 496 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDT----ADALNK 312 +VR+ A D R AI ++ Q+ GD+LIFM+G+ +I T A+ LNK Sbjct: 497 DVRFEKA--PAQDYVR---SAIKKTIEVHIQQPPGDVLIFMTGQEDIETTCYLLAEELNK 551 Query: 313 LNLRHTE--ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 L+ ILP+Y++L + EQ R+F+ R+ ++ATN+AETSLT+ G+KYVID G + Sbjct: 552 LSEATPPLLILPIYSQLRSEEQARIFEKSEFRKCIVATNIAETSLTLDGVKYVIDTGYCK 611 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EFTDPEIL 429 + Y+ R + L + PISQA+A+QRKGR GR GIC RLYS ++ E PEI Sbjct: 612 MKVYNPRIGMDALQVTPISQANADQRKGRAGRTGPGICFRLYSSLNYRQDMLENNIPEIQ 671 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 RTNLA+V+L + +L + ++ F F++ P + I + + L LGA+ + +LT L Sbjct: 672 RTNLANVVLLLKSLNINNLLDFDFMDPPPQDTILNAMYQLWVLGALD-----NVGELTEL 726 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GR++S+ P+DP L++M+++ + GC E + + S LS+ RP D++ SD + Sbjct: 727 GRKMSEFPLDPPLSKMLIKGDQLGCTEEILTVVSMLSVPGIFYRPKDREAESDAAREKLF 786 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 ESD L +N++ EQ K + C ++ +R+ +++ QL+ + +LG Sbjct: 787 VGESDHLTMLNVF----EQWKRHEFSP--EWCNEHFVQAKSMRKVREVRAQLKDIAGKLG 840 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGSGLFK--KPPK 666 + +++ Y + A+ + + K +Y R + P S L+ P Sbjct: 841 LKMSTCNFSYDVVRKAICSAYFQN-AAKIKGVGDYINLRTGMPCKLHPSSALYSLGYAPD 899 Query: 667 WVMVAELVETSRLWGRIAARIDPEWV 692 +V+ ELV TS+ + + +DP+W+ Sbjct: 900 YVVYHELVMTSKEYMHCVSAVDPQWL 925 >UniRef50_B3L2J4 Atp-dependant rna helicase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L2J4_PLAKH Length = 857 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/623 (37%), Positives = 361/623 (57%), Gaps = 33/623 (5%) Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 V+I+ G+TGSGKTTQ+ + +E K I TQPRR+AA +VA R++EEL E G + Sbjct: 224 VLIIVGDTGSGKTTQISQFVLESKFAEKKSIAVTQPRRVAAMSVAARVSEELDVELGTYV 283 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D S T++K +TDG+LL E D LL +Y+TII+DEAHER+L D L G +K Sbjct: 284 GYTIRFEDRSSTKTVIKYLTDGMLLRESMYDPLLKRYNTIILDEAHERTLATDILFGVIK 343 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 + +R DLK+I+ SAT+D +F + FN + I+ + GR YPVE+ Y E+D Sbjct: 344 NIQEQRNDLKLIVMSATLDAGKFQKFFNGSQILNIPGRLYPVEIFY------TLQAEKDY 397 Query: 275 LQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLS 328 ++ + V ++ E GDIL+F++GE EI T + KL N +LPLY+ L Sbjct: 398 IRVVIRTVYDIHVNEEEGDILVFLTGEEEIEMTKKEIEKLVSKNENAGQLVVLPLYSSLP 457 Query: 329 NSEQNRVFQ---------SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK 379 +++Q ++F+ GR+ +L+TN+AETSLT+ GI YVIDPG ++ Y+ R + Sbjct: 458 STQQQKIFEPAPKPRFKGDKMGRKCILSTNIAETSLTIEGIVYVIDPGFSKQKVYNPRAR 517 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVIL 438 V+ L I PIS+ASA QR GR GR G C RLY+E F + PE T PEILR+NL SV+L Sbjct: 518 VESLLIAPISKASAQQRAGRAGRTKPGKCFRLYTEKCFEQTLPEQTYPEILRSNLGSVVL 577 Query: 439 QMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPV 498 + LG+ D+ F F++ P + + L LGA+ D++ +LT G +S+ PV Sbjct: 578 NLKKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGAL--DDEG---ELTQKGHFMSEFPV 632 Query: 499 DPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAF 558 DP+LA++++E+ + C E + I + LS+ RP K + +DE RF + D L Sbjct: 633 DPQLAKVLIESPNYCCSSEILTIAAMLSVPYCFLRPKVKGKEADEMKTRFSHLDGDHLTL 692 Query: 559 VNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV----NS 614 +N+++ + + NA ++ C +LN+ + Q++ QL + ++++ + + S Sbjct: 693 MNVFHAFVNYSR-MDINASKKFCYDYFLNHRAMTSAQNVRNQLIRTMEKMELKIVSMNPS 751 Query: 615 EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELV 674 P Y I ALL+G + K + K Y ++ + S +F+ P+WVM EL+ Sbjct: 752 HPDYYVNIRKALLSGFYQQVAYKTS-KGYYITVKDIQIVTLHPSTVFQINPEWVMYHELI 810 Query: 675 ETSRLWGRIAARIDPEWVEPVAQ 697 T++ + R +RID +W+ +A+ Sbjct: 811 LTTKNFIRTVSRIDGKWLLEIAR 833 >UniRef50_C4QEZ9 ATP-dependent RNA Helicase, putative n=21 Tax=Eukaryota RepID=C4QEZ9_SCHMA Length = 1569 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/636 (37%), Positives = 365/636 (57%), Gaps = 29/636 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K ++++A+ D++V+IV GETGSGKTTQ+ + E G G IG TQPRR+AA Sbjct: 908 LPIFRLKDELMKAVNDNKVLIVIGETGSGKTTQITQYLAEAGYVNTGRIGCTQPRRVAAM 967 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE G +GY +RF D + T +K MTDG+LL E D L QY I++ Sbjct: 968 SVAKRVSEEFGCRLGQEVGYTIRFEDCTAPETKIKYMTDGMLLRECLIDPDLRQYSVIML 1027 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+++ D L G LK+ + +R D+K+I+TSAT+D +FS++F API + GRTYPV Sbjct: 1028 DEAHERTIHTDVLFGLLKKAIQKRDDMKLIVTSATLDSVKFSQYFFEAPIFTIPGRTYPV 1087 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADAL-NKLN 314 E+ Y + + E D L A + V ++ E GDIL+F++G+ EI + L ++ Sbjct: 1088 EILY------SLEPENDYLDAALNTVMQIHLTEPPGDILVFLTGQEEIDSGCELLYERMK 1141 Query: 315 LRHTE-----ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPG 367 +E ILP+YA L + Q+R+F R++V+ATN+AETSLT+ GI YVIDPG Sbjct: 1142 ALGSEVPELIILPVYAALPSEMQSRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVIDPG 1201 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD-P 426 + YS ++ + +L + PISQA A QR GR GR G C RLY+E + T+ P Sbjct: 1202 FVKQKVYSSKSGMDQLIVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLATNVP 1261 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI RTNLAS +LQ+ A+G+ D+ +F F++ P + + + L L A+ D++ L Sbjct: 1262 EIQRTNLASTVLQLKAMGINDLLSFDFMDPPPLQTLVAAMETLHGLSAL--DDEGL---L 1316 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T LGR++++ P++P L++M++ + C E + + S LS+Q+ RP +K + +D++ Sbjct: 1317 TRLGRRMAEFPLEPMLSKMLIMSVHLQCSEEVLTVVSMLSVQNVFYRPKEKTELADQRKA 1376 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVREWQDIYTQLRQVV 605 +FH E D L + ++N A +N F C ++L ++ QD+ QL ++ Sbjct: 1377 KFHQPEGDHLTLLAVYN-------AWKNNKFSAPWCYDNFLQARTLKRAQDVRKQLLGIM 1429 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 + V S + A+L+G + KD + T I P S LF + P Sbjct: 1430 DRHKLDVVSCGKKTALAQKAILSGFFRNAAKKDPQEGYRTLVDQQVVYIHPSSALFNRQP 1489 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 WV+ ELV T++ + R IDP W+ A + K Sbjct: 1490 DWVVYHELVMTTKEYMREVTTIDPRWLVEFAPNFFK 1525 >UniRef50_Q7PT33 AGAP007212-PA n=4 Tax=cellular organisms RepID=Q7PT33_ANOGA Length = 1288 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 235/645 (36%), Positives = 372/645 (57%), Gaps = 35/645 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LP+ + + D+++A+ D+Q++IV GETGSGKTTQ+ + E G +G IG TQPRR+AA Sbjct: 631 SLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLAESGFIARGKIGCTQPRRVAA 690 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VA R+AEE G +GY +RF D S T++K MTDG+LL E D L Y I+ Sbjct: 691 MSVAKRVAEEYGCRLGQEVGYTIRFEDCTSQETVIKYMTDGMLLRECLVDFDLKSYSVIM 750 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHER+++ D L G LK+ + +RP+LK+I+TSAT+D +FS++F API + GRT+P Sbjct: 751 LDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFP 810 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL- 313 VE+ Y + E D L A V ++ +E GD+L+F++G+ EI + L + Sbjct: 811 VEILY------TKEPETDYLDASLITVMQIHLREPPGDVLLFLTGQEEIDTACEILYERM 864 Query: 314 -----NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDP 366 ++ ILP+Y+ L + Q R+F R++V+ATN+AETSLT+ GI YV+DP Sbjct: 865 KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDP 924 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE----DDFLSRPE 422 G + Y+ +T + L + PISQA+A QR GR GR G RLY+E D+ L P Sbjct: 925 GFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKAYRLYTERAYRDEMLPTPV 984 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 PEI RTNLA+ +LQ+ +G+ D+ F F++AP ++ V LE+L +++ + Sbjct: 985 ---PEIQRTNLATTVLQLKTMGINDLLHFDFMDAPP---VESLVMALEQLHSLSALDNEG 1038 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 LT LGR++++ P++P L+++++ + C E + I S LS+Q+ RP DKQ +D Sbjct: 1039 L--LTRLGRRMAEFPLEPNLSKLLIMSVALQCSDEVLTIVSMLSVQNVFYRPKDKQALAD 1096 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 +K +F+ E D L + ++N + SNA+ C +++ ++ QD+ QL Sbjct: 1097 QKKAKFNQIEGDHLTLLAVYNSWKNNK---FSNAW---CYENFVQIRTLKRAQDVRKQLL 1150 Query: 603 QVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662 ++ + V S + A+ +G + KD + T + I P S LF Sbjct: 1151 GIMDRHKLDVVSAGKNTVRVQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN 1210 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 + P+WV+ ELV+T++ + R IDP+W+ A + +S+P Sbjct: 1211 RQPEWVVYHELVQTTKEYMREVTTIDPKWLVEFAPAFFR--FSDP 1253 >UniRef50_O22899 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=8 Tax=Eukaryota RepID=DHX15_ARATH Length = 729 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/651 (36%), Positives = 375/651 (57%), Gaps = 47/651 (7%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL------GRGIKGLIGHTQ 129 +LPV +K D L + +Q +I+ GETGSGKTTQ+P+ ++ +G K L+G TQ Sbjct: 64 DLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQ 123 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AA +V+ R+A+E+ G +GY +RF D S TM+K +TDG+LL E D LL Sbjct: 124 PRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLE 183 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +Y II+DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F+ AP+++V Sbjct: 184 RYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKV 243 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTAD 308 GR +PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI D Sbjct: 244 PGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 297 Query: 309 ALNK--LNLRH----TEILPLYARLSNSEQNRVFQ---------SHSGRRIVLATNVAET 353 +NK NL +++PLY+ L + Q ++F +GR+IV++TN+AET Sbjct: 298 KINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAET 357 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+ Sbjct: 358 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 417 Query: 414 EDDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 E F + +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L Sbjct: 418 EKSFNNDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 476 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 LGA+ D++ + LT G +S+ P+DP++++M++ + + C E + +++ LS+ + Sbjct: 477 LGAL--DDEGN---LTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCF 531 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 RP + Q+A+DE RF + D L +N+++ + +N C +++N + Sbjct: 532 VRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ------NNEDPNWCFENFVNNRAM 585 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKDADKQEYTGA 647 + ++ QL +++ + + S R+ ++ A+L G + + T Sbjct: 586 KSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVK 645 Query: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 N + P + L K P+WV+ E V T+R + R I EW+ VAQH Sbjct: 646 DNQVVHLHPSNCLDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQH 695 >UniRef50_Q54MH3 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=5 Tax=Eukaryota RepID=DHX16_DICDI Length = 1106 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 243/679 (35%), Positives = 386/679 (56%), Gaps = 35/679 (5%) Query: 41 DAQQAIFQEMAKEIDQAAGKVLLRE----AARPEITYPD---NLPVSQKKQDILEAIRDH 93 D + I +E+ K+ + G ++L+ +A+ ++T + +LPV ++ +++A+R++ Sbjct: 424 DQIEFIKEEVLKQGQKGDGVMILKPGDDGSAQAKMTIQEVRKSLPVYPYREQLIDAVREY 483 Query: 94 QVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGC 153 QV+I+ GETGSGKTTQ+P+ E G G IG TQPRR+AA +VA R+AEE+ + G Sbjct: 484 QVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNE 543 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY +RF D S T+++ MTDG+L+ E L Y +IIDEAHER+L+ D L G L Sbjct: 544 VGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLL 603 Query: 214 KELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 K++ RPDLK++I+SAT+D ERFS +F+ AP + GR Y V Y E D Sbjct: 604 KDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHY------TQAPEAD 657 Query: 274 QLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK------LNLRHTEILPLYAR 326 L A V ++ E GDIL+F++G+ E+ A+ L ++ I +Y+ Sbjct: 658 YLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYST 717 Query: 327 LSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 384 L Q ++F+ + R++VLATN+AETSLT+ GI YVIDPG + ++ RT ++ L Sbjct: 718 LPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLV 777 Query: 385 IEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFTDPEILRTNLASVILQMTAL 443 I P+S+ASANQRKGR GRV+ G C RL++ F + E T PEI RTNL +V+L + ++ Sbjct: 778 ITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSM 837 Query: 444 GLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLA 503 G+ D+ F F++ P + + + L LGA+ Q LT LGR++++ PVDP+L+ Sbjct: 838 GINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQ-----LTKLGRKMAEFPVDPQLS 892 Query: 504 RMVLEAQKHGCVREAMIITSALSIQDP-RERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562 +M++ ++K+ C E + I + LS+ + RP DK A+D + F + D L +N++ Sbjct: 893 KMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFHPQGDHLTLMNVF 952 Query: 563 NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREI 622 N E A+ + C +++ + ++ QD+ QL +++ + IP+ S + I Sbjct: 953 NQWRESGYAV------QWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSI 1006 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 + +G + + T N I P S LF+ PPKWV+ ELV T++ + R Sbjct: 1007 RKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTKEFMR 1066 Query: 683 IAARIDPEWVEPVAQHLIK 701 I W+ +A H+ K Sbjct: 1067 QIVEIQSSWLHEIAPHIYK 1085 >UniRef50_B2S1H1 ATP-dependent protease La n=22 Tax=Borrelia RepID=B2S1H1_BORHD Length = 828 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 221/625 (35%), Positives = 365/625 (58%), Gaps = 20/625 (3%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K ++++ +R + V+IV TGSGKTTQ+P+I E G G IG TQPRR+A Sbjct: 6 LPIYKYKDELIKKLRTNNVLIVESPTGSGKTTQIPRIIYEAGLAKLGKIGVTQPRRIATI 65 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A IA+ + G +GYK+RF + S T +KLMTDG+LL E+++D LL +YD III Sbjct: 66 SIAEYIAKHIGVNLGEEVGYKIRFQEITSPKTKIKLMTDGVLLQELKKDTLLYEYDVIII 125 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLNIDF+LG +K++L +R D K+II+SATI+ + FS++FNNAPI+ + TYPV Sbjct: 126 DEAHERSLNIDFILGLIKDILKKRNDFKVIISSATINTKVFSKYFNNAPILNIETITYPV 185 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR 316 ++ Y P + + +++ I + + ++ GDILIF+SGE+EI++T A+ +LN + Sbjct: 186 QIIYNPPLLNTSKSMILKIKEIISGI--IKEKKEGDILIFLSGEKEIKETIKAIYELNSK 243 Query: 317 H-TEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 ILPLY R++ Q ++F + R+I+++TN+AETS+T+ IK VID G + ++ Sbjct: 244 QDLVILPLYGRMAKEAQEQIFMPTPKNKRKIIVSTNIAETSITIENIKIVIDSGKVKTNK 303 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 + +T L PIS++SA QR GR GR+S+G C RLY D++ R E+ EI RT+L Sbjct: 304 FQMKTHTYSLQEVPISKSSATQRAGRAGRLSKGTCYRLYKRDEYQLRDEYQKEEIYRTDL 363 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 + VIL+M +G+ + F F+ P ++IQ +L+ L AI + LT +G+ + Sbjct: 364 SEVILRMADIGIRNFTKFDFISKPSIKSIQTASDILKSLDAINEKNE-----LTEIGKYM 418 Query: 494 SQLPVDPRLARMVLEA--QKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 P+ P +R ++EA + I S LS P +++ + + H ++ + Sbjct: 419 IIFPLIPIHSRALVEAMINYQKAIYPTTIGLSFLSTSGVFLLPQNEEIEARQAHLKYKNP 478 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 D + F+N++ + +KA++ F + +YL+ + E ++ QL +V IP Sbjct: 479 LGDLIGFINIFE---DYKKAINKEDF---AKENYLDLQGLEEITNVQRQLENIVSSFNIP 532 Query: 612 VNSEPAEYREIHI-ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMV 670 + +E ++ +++ G+ +I K K +Y + I PGS + K+ + Sbjct: 533 IVHTHEIDQEGYLKSIMRGMKDYICFKSL-KNKYKTIKAQNVVIHPGSLINTDSVKYFVA 591 Query: 671 AELVETSRLWGRIAARIDPEWVEPV 695 E++ETS+ + R + EW+ + Sbjct: 592 GEIIETSKRYARSIGVLKKEWINDI 616 >UniRef50_Q75EQ9 AAR020Wp n=2 Tax=Saccharomycetaceae RepID=Q75EQ9_ASHGO Length = 1112 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/630 (35%), Positives = 366/630 (58%), Gaps = 30/630 (4%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LPV + ++ ++ AIRD+Q +++ GETGSGKTTQ+ + E G + G+IG TQPRR+A Sbjct: 447 ESLPVFKMRETLVSAIRDNQFLVIVGETGSGKTTQITQYLDEEGFSVGGMIGCTQPRRVA 506 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R++EE+ + G +GY +RF D S T +K MTDG+L E D + +Y I Sbjct: 507 AVSVAKRVSEEMGCKLGEDVGYTIRFEDQTSRKTRIKYMTDGMLQVEALLDPTMSRYSVI 566 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L LK+ +RPDL++I+TSAT+D E+FS++F + P+I++SG+T+ Sbjct: 567 MLDEAHERTVSTDVLFSLLKQAALKRPDLRVIVTSATLDSEKFSKYFLDCPVIKISGKTF 626 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN-- 311 PV+V Y ++ + D ++A D V E+ ES GDIL+F++ + EI + L Sbjct: 627 PVDVIY------SETPQLDYIEAALDTVMEIHINESPGDILVFLTSQEEIDACCEILYER 680 Query: 312 ----KLNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVID 365 K ++ ILP+Y+ L + Q+++F+ R+++ ATN+AETS+T+ GI YV+D Sbjct: 681 VQALKETIQELLILPVYSALPSEVQSKIFEPTPKGSRKVIFATNIAETSITIDGIYYVVD 740 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR--PEF 423 PG A+ + Y+ + +++L + PISQ+ A+QRKGR GR G C RL++E F P Sbjct: 741 PGYAKSNIYNPKIGIEQLVVSPISQSQADQRKGRAGRTGPGKCYRLFTEAAFHREMVPN- 799 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 + PEI R NL IL + A+G+ D+ F F++ P + ++ + L L A+ D Sbjct: 800 SVPEIQRQNLEHTILMLKAMGINDLLNFDFMDPPPRSSMVHALEALYNLQALDED----G 855 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK-QQASD 542 Y LT LG+++SQ P++P L++ ++ + + GC E + I + LS+Q+ RP DK Q+ Sbjct: 856 Y-LTQLGKRMSQFPMEPALSKSLIASVEQGCSDEILTIIAMLSVQNVFYRPKDKIQETRY 914 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 K FH D L +N+ N E +N + C ++L+ +R +D+ QL+ Sbjct: 915 SKKHGFHHPFGDHLTLLNIHNRWQE------NNFSKSFCAENFLHERHLRRAKDVKEQLK 968 Query: 603 QVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662 ++ K L +P+ S I L++G + +D T SI P S LF Sbjct: 969 RIFKNLDLPIRSCHGNVDLIRKTLVSGFFRNAAKRDPQVGYKTIVDETAVSIHPSSCLFG 1028 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWV 692 K +V+ LV TS+ + ID +W+ Sbjct: 1029 KECDYVIYHSLVLTSKEYMSQVTLIDRKWL 1058 >UniRef50_C5DJP0 KLTH0F17974p n=2 Tax=Saccharomycetaceae RepID=C5DJP0_LACTC Length = 1108 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 251/640 (39%), Positives = 370/640 (57%), Gaps = 40/640 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134 +LP Q + ++L+ IRD+QVV+V GETGSGKTTQL + E G G L+G TQPRR+A Sbjct: 396 SLPAYQVRSELLQLIRDNQVVVVIGETGSGKTTQLAQFLNEDGFCNSGRLVGCTQPRRVA 455 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A E+ E G +GY +RF D S +T +K MTDGILL E +L +Y I Sbjct: 456 AMSVATRVAMEMGVELGNEVGYSIRFEDKTSKDTKIKFMTDGILLRETLVSEMLDKYSCI 515 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHERSLN D L G LK LL +R DLK+IITSAT++ RFSR F AP + GRT+ Sbjct: 516 IMDEAHERSLNTDVLFGILKNLLSKRRDLKLIITSATMNANRFSRFFGAAPQFTIPGRTF 575 Query: 255 PVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL-- 310 PV+V Y P+ +D E +QA + + S+GDILIFM+G+ +I T + Sbjct: 576 PVQVVYSRHPV---SDYVESAIVQAC--KIHLSTPVSNGDILIFMTGQEDIEATCAGVYE 630 Query: 311 ------------NKLNL-RHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLATNVAETSLT 356 +LN EILP+Y+ L Q ++F+ + + R++V+ATN+AETSLT Sbjct: 631 KLLDVYAKRSGKQQLNQPEDIEILPIYSALPADVQGKIFEPTPNKRKVVVATNIAETSLT 690 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 V G++YVID G +++ Y+ + + L I PIS ASANQR GR GR G RLY+ED Sbjct: 691 VEGVRYVIDCGYSKLKVYNPQIGLDSLQIAPISMASANQRSGRAGRTGPGFAYRLYTEDS 750 Query: 417 FLSRPEF-TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 F T PEI RTNL++ +L + LG+ DI AFPFV+ P ++ I + L +GA+ Sbjct: 751 FFDDMYVQTIPEIQRTNLSNTLLLLKYLGVNDIMAFPFVDPPPEQIIMTSLFELWTIGAL 810 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 + LT LG+Q++ P+ P L++M+L + ++GC E + I S LS+ RP Sbjct: 811 D-----NFGNLTELGKQMAAFPLQPSLSKMLLVSSQNGCSEEILTIVSMLSVPQVFYRPK 865 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 ++++ SD+ RF ESD L +N+++ Q KA S ++ CR ++L + ++ + Sbjct: 866 EREKESDQCRTRFFVPESDHLTLLNVYS----QWKANSYSS--HWCRRNFLQFKSLQRAR 919 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA-RFSI 654 +I QL ++ + +PV S ++ + + G +H K + YT RN + Sbjct: 920 EIRRQLYTLMNKKKVPVVSSGTDWDAVRKCICAG-YAHQAAKLSGLSRYTQLRNGLELRV 978 Query: 655 FPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 P S LF P +V+ EL+ T+ + +DP+W+ Sbjct: 979 HPTSALFGAGDLPSYVVYHELLLTTNEYINTVTAVDPDWL 1018 >UniRef50_Q54NJ4 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 n=19 Tax=Eukaryota RepID=DHX15_DICDI Length = 727 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 228/638 (35%), Positives = 373/638 (58%), Gaps = 31/638 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LPV ++K+D ++ I+++QVVI+ GETGSGKTTQ+P+ ++ G G ++G TQPRR+AA Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAA 136 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VA R++EE+ E G +GY +RF + S T +K +TDG+LL E D L +YD II Sbjct: 137 ISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVII 196 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHER+L+ D L G +K++L RR DLK+I+ SAT++ +F ++F NAP+I+V GR +P Sbjct: 197 LDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHP 256 Query: 256 VEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDTADALNK-- 312 VE+ Y EEA +D L+ A+ +D + E GDIL+F++GE EI DT + + Sbjct: 257 VEIFY---TEEA---AKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRET 310 Query: 313 --LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 L + LPLY+ L +Q+++F + R+ +++TN+AETSLT+ GI +V+DPG ++ Sbjct: 311 RERGLPPMKTLPLYSSLPIYQQSKIFDTCKERKCIVSTNIAETSLTIDGIVFVVDPGFSK 370 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEIL 429 Y+ R++V+ L + PIS+ASANQR GR GR G C RLY+E F + T PEIL Sbjct: 371 QKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEIL 430 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 R+NLASV+LQ+ LG+ D+ F F++ P + + +L LGA+ + Q LT + Sbjct: 431 RSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQ-----LTEI 485 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 G +S+ P+DP+L++M++ + + C E + I + LS + RP D + +D + F Sbjct: 486 GSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAKKSFD 545 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 + D L +N+++ + + + C ++LN+ +++ + +QL +++ Sbjct: 546 HFDGDHLTMLNVYHSFKKNGEDPT------WCYDNFLNHRAIKQADSVRSQLARILTRFK 599 Query: 610 IP-----VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 +P VNS+ Y I + G + + +T P +GL ++ Sbjct: 600 LPLVSGDVNSK-FYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTRR- 657 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 P++ + E V TS + R + +W+ +A K+ Sbjct: 658 PEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQ 695 >UniRef50_C0H5K5 Splicing factor, putative n=2 Tax=Plasmodium falciparum 3D7 RepID=C0H5K5_PLAF7 Length = 1151 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/674 (33%), Positives = 365/674 (54%), Gaps = 72/674 (10%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K ++L+A+ ++ ++I+ GETGSGKTTQ+ + E G G+I TQPRR+AA Sbjct: 479 LPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAAV 538 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++ E+ + G +GY +RF D+ + +T ++ +TDGILL E D+ L +Y II+ Sbjct: 539 SVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIM 598 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERS+N D LLG LK + +R DLK+I+TSATID ++FS F NAPI + GRT+ V Sbjct: 599 DEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKV 658 Query: 257 EVRY--RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTA------- 307 + Y P + + + +Q D + GDILIFM+G+ +I T Sbjct: 659 HIEYLRTPCNDYIECAVQKAIQ--IHVSDNNYDNNFGDILIFMTGQEDINATCYLLSERF 716 Query: 308 ---------------DALNKLNLRHTE------------------------------ILP 322 D +NK+ E I P Sbjct: 717 YEVYESYKESKNNKKDTINKIKNILNEDNNNNNNDSNIKKKVDGDNNTNDHMIYPFYIFP 776 Query: 323 LYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 +Y++LS+ +Q+++F+ + R+I+++TN+AETSLT+ GIKYVID G ++ Y+ + Sbjct: 777 IYSQLSSEQQSKIFKKYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDV 836 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD-PEILRTNLASVILQMT 441 L + PISQA+ANQR GR GR GIC RLY+E+ FL + PEI R+NL++V+L + Sbjct: 837 LQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLK 896 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 +L + ++ F F++ P K +I + + L LGAI + LT +GR++ Q P+DP Sbjct: 897 SLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGN-----LTDIGRKMVQFPLDPP 951 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL 561 L+++V+ +Q C +E +II S LS + ++ + K +F ESD L +N+ Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNI 1011 Query: 562 WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE 621 + + S N C +++ Y + + +++Y+QL ++K L I S ++ Sbjct: 1012 Y------LQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWEL 1065 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGAR-NARFSIFPGSGLFK--KPPKWVMVAELVETSR 678 I + +G H K EY R N + P S L+ P +V+ E+V T++ Sbjct: 1066 IRKTICSGYF-HNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTK 1124 Query: 679 LWGRIAARIDPEWV 692 + R +DPEW+ Sbjct: 1125 EYMRNVTTVDPEWL 1138 >UniRef50_C0NP73 ATP-dependent RNA helicase DHX8 n=10 Tax=Dikarya RepID=C0NP73_AJECG Length = 1266 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 240/639 (37%), Positives = 364/639 (56%), Gaps = 31/639 (4%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LPV + ++ +LEA+ ++Q++IV G+TGSGKTTQL + E G G+IG TQPRR+A Sbjct: 600 ESLPVFKFRKQLLEAVTENQLLIVVGDTGSGKTTQLTQYLAEGGFANNGIIGCTQPRRVA 659 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R++EE+ G +GY +RF D S T +K MTDGIL EI D L +Y I Sbjct: 660 AVSVAKRVSEEVGCRLGAEVGYTIRFEDCTSPETKIKYMTDGILQREILLDPDLKKYSVI 719 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L G LK+ + RRPDLKII+TSAT+D ++FS +FN PI + GRTY Sbjct: 720 MLDEAHERTISTDVLFGLLKKTIQRRPDLKIIVTSATLDADKFSEYFNMCPIFSIPGRTY 779 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTA-----D 308 PVE+ Y + + E D L A V ++ E GDIL+F++G+ EI DTA + Sbjct: 780 PVEIMY------SREPESDYLDAALVTVMQIHLTEPAGDILLFLTGQEEI-DTACEILYE 832 Query: 309 ALNKLNLRHTE--ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVI 364 + L E ILP+Y+ L + Q+R+F+ R++V+ATN+AETS+T+ I YV+ Sbjct: 833 RMKALGPSVPELIILPVYSALPSEMQSRIFEPAPPGSRKVVIATNIAETSITIDQIYYVV 892 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EF 423 DPG + + Y + + L + PISQA A QR GR GR G C RLY+E + S Sbjct: 893 DPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRSGRAGRTGPGKCFRLYTEAAYQSEMLPT 952 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT-DEQAS 482 T PEI R NL+ IL + A+G+ D+ F F++ P + + LEEL A++ D++ Sbjct: 953 TIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTM---LTALEELYALSALDDEG- 1008 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 LT LGR+++ P++P LA++++ + + GC E + I + LS+ RP +KQQ +D Sbjct: 1009 --LLTRLGRKMADFPMEPALAKVLIASVEMGCSDEMLSIVAMLSVHSIFYRPKEKQQQAD 1066 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 +K +FHD D L +N++N G + SS C +++ ++R QD+ QL Sbjct: 1067 QKKAKFHDPHGDHLTLLNVYN--GWKNSRFSSP----WCFENFIQARQMRRVQDVREQLV 1120 Query: 603 QVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662 +++ V S + AL +G + KD + T + P S LF Sbjct: 1121 TIMERYKHKVVSCGRNTTRVRQALCSGFFRNAARKDPQEGYKTLIEGTPVYMHPSSALFG 1180 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 K + V+ LV T++ + I+P+W+ A K Sbjct: 1181 KAAEHVIFHTLVLTTKEYMHCTTSIEPKWLVEAAPTFFK 1219 >UniRef50_C4JEY7 ATP-dependent RNA helicase DHX8 n=25 Tax=cellular organisms RepID=C4JEY7_UNCRE Length = 1446 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 249/668 (37%), Positives = 381/668 (57%), Gaps = 38/668 (5%) Query: 50 MAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQ 109 +A++ID A K E R +LP+ Q ++++L+AI DHQ++I+ GETGSGKTTQ Sbjct: 433 LAQQIDAAEKKAASIEETR------KSLPIYQFREELLQAIADHQIIIIVGETGSGKTTQ 486 Query: 110 LPKICMELGRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNT 168 +P+ E G G+ IG TQPRR+AA +VA R+AEE+ + G +GY +RF D SD T Sbjct: 487 IPQYLHEAGYTKGGMKIGCTQPRRVAAMSVAARVAEEMGVKVGNEVGYAIRFEDATSDKT 546 Query: 169 MVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIIT 228 ++K MTDG+LL E+ + L QY ++IDEAHER++ D G LK++ RPDLK++I+ Sbjct: 547 ILKYMTDGLLLKELLTEPDLSQYAALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLIS 606 Query: 229 SATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-Q 287 SATID ++F ++F++API + GR YPV++ Y E + L A V ++ Sbjct: 607 SATIDAQKFQKYFDDAPIFNIPGRRYPVDIHY------TSQPEANYLAAAITTVFQIHIT 660 Query: 288 ESHGDILIFMSGEREI----RDTADALNKLNLRHTE--ILPLYARLSNSEQNRVFQSH-- 339 + GDIL+F++G+ EI ++ + KL + E I P+YA L + Q ++F+ Sbjct: 661 QGRGDILVFLTGQEEIEAAEQNLQETARKLGGKVPEMIICPIYANLPSELQTKIFEPTPP 720 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 R++VLATN+AETSLT+ GI YVIDPG + + ++ RT ++ L + P S+ASA QR GR Sbjct: 721 GARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASAGQRAGR 780 Query: 400 CGRVSEGICIRLYSEDDFLSRPEF-TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 GRV G C RLY++ + + E T PEI RTNL+SV+L + +LG+ D+ F F++ P Sbjct: 781 AGRVGPGKCFRLYTKWAYHNELEANTTPEIQRTNLSSVVLMLKSLGIDDLLDFDFMDPPP 840 Query: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518 + + L LGA+ + LT +GRQ+++ P DP LA+ +L A K+GCV E Sbjct: 841 AETLIRALEQLYALGALNDHGE-----LTKIGRQMAEFPTDPMLAKAILAAGKYGCVEEI 895 Query: 519 MIITSALSIQDPR-ERPMDKQQASDEKHRRFHDKE-SDFLAFVNLWNYLGEQQKALSSNA 576 + I + L RP DK+ +D RF K+ D L+ +N+WN + + S+ Sbjct: 896 LSIIAMLGEASALFYRPKDKKIHADSARARFTVKDGGDHLSLLNIWN------QWVDSDF 949 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA-EYREIHIALLTGLLSHIG 635 R ++L + +D+ QL ++ + + V++ A I A+ G + Sbjct: 950 SYVWARENFLQQRSLTRARDVRDQLAKLCDRVEVAVSTAGANNLVPIQKAITAGFFPNAA 1009 Query: 636 MKDADKQEYTGARNAR-FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 Y +N + + P S LF+ PKWV+ ELV TS+ + R + PEW+ Sbjct: 1010 RLQRGGDSYWTVKNGQTVYLHPSSTLFEVNPKWVIYHELVLTSKEYMRSNMPLQPEWLVE 1069 Query: 695 VAQHLIKR 702 VA H K+ Sbjct: 1070 VAPHYHKQ 1077 >UniRef50_Q5CYX6 Prp16p pre-mRNA splicing factor. HrpA family SFII helicase n=2 Tax=Cryptosporidium RepID=Q5CYX6_CRYPV Length = 1042 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 241/665 (36%), Positives = 377/665 (56%), Gaps = 43/665 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LPV + + +++ I +H VV+V GETGSGKTTQL + E G +G+IG TQPRR+AA Sbjct: 318 SLPVYKVRDSLIKLIGEHMVVVVVGETGSGKTTQLTQYLHEFGYSKRGIIGCTQPRRVAA 377 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VA R+A+E+ + G +GY +RF D S +T++K MTDG+L+ E D L +Y II Sbjct: 378 VSVAQRVADEMNVDLGKEVGYTIRFEDFTSKSTVIKYMTDGVLMRESLSDPELERYSAII 437 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHERSLN D L G + +L R D ++I+TSAT+D E+ S F NAPI + GRT+P Sbjct: 438 MDEAHERSLNTDVLFGIFRSVLSNRRDFRLIVTSATMDSEKLSSFFGNAPIFNIPGRTFP 497 Query: 256 VEVRY-RPIVEEADDTERDQLQAIF-----------DAVDELSQESHGDILIFMSGEREI 303 VE+ Y R ++ D Q I D DE Q+ GDILIFM+G+ +I Sbjct: 498 VEIEYLRYFPDDYIDAAVRQCLKIHCTNPLSLLENKDNSDE-KQKKDGDILIFMTGQEDI 556 Query: 304 RDT----ADALNKLNLRHTE---ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 T ++ L L + + ILP+Y++L + Q ++F+ R++++ATN+AETSLT Sbjct: 557 EATCILISEKLENLMIDGADPLMILPIYSQLPSDLQAKIFKPSPYRKVIVATNIAETSLT 616 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + GI+YVID G ++ Y+ + + L I PISQA+A QR GR GRVS GIC R+Y+E Sbjct: 617 LDGIRYVIDCGLCKVKVYNPKIGMDSLQITPISQANALQRSGRAGRVSSGICYRMYTEQT 676 Query: 417 FLSR--PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 FL+ P + PEI RTNL++V+L + +LG D+ +FPF++ P +I + L LGA Sbjct: 677 FLADMLPN-SVPEIQRTNLSNVVLLLKSLGSEDVFSFPFIDPPSSSSISTSLYQLWSLGA 735 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + D+ S LT LGRQ+++ P+DP L++++L A K C+ EA+++ + L++ RP Sbjct: 736 L--DDNGS---LTDLGRQMARFPLDPPLSKVLLTANKLDCLIEAIVVVAMLTVPSIFYRP 790 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 D+ + +D +F ESD L +N++ Q K SN R +L+ + Sbjct: 791 KDRLEEADASREKFSIPESDHLTLLNIF----IQWKRHGSNV--RWSERHFLHQKALMRV 844 Query: 595 QDIYTQLRQVVKELG-------IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGA 647 ++++ Q+ ++ + I P + + A +G + A Q + Sbjct: 845 EEVFNQIVEIYSNIMSMETMPRIDWKPNPLCWDNLRKAFCSGYFHNSAKIRAIGQYVNLS 904 Query: 648 RNARFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 + I P S LF P +++ E++ TS+ + + I+PEW+ A H+ K + Sbjct: 905 TSVPTYIHPSSSLFLSGVNPDYLIYHEVIITSKEYMNAVSAIEPEWLNFYAPHIFKLNIN 964 Query: 706 EPHWE 710 + + E Sbjct: 965 DSNKE 969 >UniRef50_A7AWE8 RNA helicase, putative n=2 Tax=Piroplasmida RepID=A7AWE8_BABBO Length = 1156 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 237/646 (36%), Positives = 360/646 (55%), Gaps = 35/646 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR-----GIKGLIGHTQ 129 ++LP+ + ++L+A++++ ++IV GETGSGK+TQ+P+ E G G +IG TQ Sbjct: 497 ESLPIFALRDELLQAVQENDILIVVGETGSGKSTQIPQYLAESGYTSGSDGESMVIGCTQ 556 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AA +VA R++EE+ G +GY +RF D + +T++K MTDG+LL E+ QD LL Sbjct: 557 PRRVAAMSVAKRVSEEVGCRLGQEVGYCIRFEDCTTKDTVIKFMTDGMLLREVLQDPLLE 616 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 QY I++DEAHER++ D L LK +R + K+I+TSAT++ E+FS +FN+A I + Sbjct: 617 QYACIMLDEAHERTIATDVLFALLKNCCSKRENFKLIVTSATLEAEKFSTYFNDASIFSI 676 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTAD 308 GR +PVE+ + D E D ++A V + E GDIL+F++G+ EI Sbjct: 677 PGRMFPVEILH------TTDQESDYMEASLITVLNIHLNEPAGDILLFLTGQEEIDVACR 730 Query: 309 ALNKLNLRHTE-------ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPG 359 L++ R ILP+YA L Q +F+ R+ V+ATN+AE SLT+ G Sbjct: 731 TLHERMKRLESMSPPPLIILPVYAALPGEMQGAIFEPTPPGCRKCVIATNIAEASLTIDG 790 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I YVIDPG A++ RY+ RT ++ L + PISQASA QR GR GR G C RLY+ED + S Sbjct: 791 IFYVIDPGFAKVKRYNPRTGMESLVVVPISQASAKQRAGRAGRTGPGKCYRLYTEDAYRS 850 Query: 420 RPEFTD-PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 T PEI RTNLA+V++ + A+G+ D F F++ P + D + L LGA+ D Sbjct: 851 EMLPTAVPEIQRTNLANVVILLKAMGINDFLNFDFMDKPPVETLIDALDNLYHLGAL--D 908 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 ++ LT LGR++++ P+DP LA+M+L + C E + I S LSIQ+ RP DKQ Sbjct: 909 DEG---LLTRLGRKMAEFPMDPNLAKMLLTSVDLECSDEVITIVSMLSIQNIFYRPQDKQ 965 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL-CRTDYLNYLRVREWQDI 597 +D RF E D L + ++N N F + C ++L + QD+ Sbjct: 966 AEADRAKSRFTQAEGDHLTLLYVYN-------QWRKNKFSSVWCHENFLQSRALLRAQDV 1018 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 QL ++ V S I ++ G H +D + T I P Sbjct: 1019 RKQLISIMDRYRFKVVSCGNNAEVISKSVCAGYFHHSARRDPQEGYRTIVDQQNVFIHPS 1078 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 S L+ + P++V+ ELV T++ + R + +W+ +A + KR+ Sbjct: 1079 SALYNRSPEYVVYHELVMTTKEYMRDLTIVKAQWLLELAPSMFKRS 1124 >UniRef50_C0SAG2 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 n=2 Tax=Eukaryota RepID=C0SAG2_PARBP Length = 1093 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 242/675 (35%), Positives = 375/675 (55%), Gaps = 41/675 (6%) Query: 43 QQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET 102 +Q +FQ+ +Q A + E R +LP+ + +++I++A+ DHQ++I+ GET Sbjct: 420 EQQLFQQKLNAAEQKAASI---EETR------KSLPIYRFREEIIQAVADHQIIIIVGET 470 Query: 103 GSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFS 161 GSGKTTQ+P+ E G G+ IG TQPRR+AA +VA R+AEE+ + G +GY +RF Sbjct: 471 GSGKTTQIPQYLHEAGYTKGGMKIGCTQPRRVAAMSVAARVAEEMGVKVGNEVGYAIRFE 530 Query: 162 DHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP 221 D SD T++K MTDG+LL E+ + L Y ++IDEAHER+++ D G LK++ RP Sbjct: 531 DATSDKTVLKYMTDGMLLRELLTEPDLGAYSVLMIDEAHERTVSTDIACGLLKDIAKARP 590 Query: 222 DLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDA 281 DLK++I+SATID ++F ++F++API + GR YPV++ Y E + L A Sbjct: 591 DLKLLISSATIDAQKFQKYFDDAPIFNIPGRRYPVDIHY------TLQPEANYLAAAITT 644 Query: 282 VDELS-QESHGDILIFMSGEREIRDTADALN----KLNLRHTE--ILPLYARLSNSEQNR 334 V + + GDIL+F++G+ EI ++ KL + E I P+YA L + Q + Sbjct: 645 VFHIHISQGKGDILVFLTGQEEIEAAEQSIQETARKLGSKIPELIICPIYANLPSELQAK 704 Query: 335 VFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 +F+ R++VLATN+AETSLT+ GI YVIDPG + + ++ RT ++ L + P S+AS Sbjct: 705 IFEPTPPGARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRAS 764 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFTDPEILRTNLASVILQMTALGLGDIAAF 451 A QR GR GRV G C RLY++ + + E T PEI RTNL V+L + +LG+ + F Sbjct: 765 AGQRAGRAGRVGPGKCFRLYTKWAYYNELEENTTPEIQRTNLNGVVLMLKSLGIDQLLDF 824 Query: 452 PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK 511 F++ P + + L LGA+ LT +GRQ+++ P DP LA+ +L A K Sbjct: 825 DFMDPPPAETLIRALEQLYALGALNDHGD-----LTKVGRQMAEFPTDPMLAKAILAADK 879 Query: 512 HGCVREAMIITSALS-IQDPRERPMDKQQASDEKHRRFHDKE-SDFLAFVNLWNYLGEQQ 569 +GCV E + I + L RP DK+ +D RF K+ D + +N+WN Sbjct: 880 YGCVEEVLSIIAMLGEASSLFFRPKDKKIHADSARARFTIKDGGDHFSLLNVWN------ 933 Query: 570 KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE-PAEYREIHIALLT 628 + + S+ R ++L + +D+ QL ++ + + + S + I A+ Sbjct: 934 QWVDSDFSYVWARENFLQQRSLTRARDVRDQLAKLCDRVEVTITSSGSSNLVPIQKAITA 993 Query: 629 GLLSHIGMKDADKQEYTGARNAR-FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 G + Y +N + + P S LF+ PKWV+ ELV TS+ + R + Sbjct: 994 GFFPNAARLQRGGDSYRTVKNGQTVYLHPSSTLFEVNPKWVIYYELVLTSKEYMRSNMPL 1053 Query: 688 DPEWVEPVAQHLIKR 702 PEW+ VA H K+ Sbjct: 1054 QPEWLVEVAPHYHKK 1068 >UniRef50_Q759P9 ADR224Wp n=2 Tax=Saccharomycetaceae RepID=Q759P9_ASHGO Length = 1090 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 249/642 (38%), Positives = 366/642 (57%), Gaps = 44/642 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134 LPV + K +L+ IRD+QV ++ GETGSGKTTQL + E G G IG TQPRR+A Sbjct: 377 TLPVYEVKSQLLQVIRDNQVTVIIGETGSGKTTQLAQYLHEDGFCRLGKQIGVTQPRRVA 436 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A E+ E G +GY +RF D S +T +K MTDGILL E D LL +Y I Sbjct: 437 AMSVAERVALEMGVELGKEVGYAIRFEDKTSADTRLKFMTDGILLRETLIDDLLEKYACI 496 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHERSLN D LLG+ K LL RR +LK+IITSAT++ +FS+ F +AP + GRT+ Sbjct: 497 IMDEAHERSLNTDVLLGFFKNLLTRRRNLKLIITSATMNASKFSQFFGDAPQFTIPGRTF 556 Query: 255 PVEVRYR--PIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK 312 PV++ Y P+ D E QA A LS GDILIFM+G+ +I T DAL + Sbjct: 557 PVQINYTSYPV---PDYVEAAVQQA---ASIHLSTSLLGDILIFMTGQEDIEATCDALKE 610 Query: 313 --LNLR-------------HTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSL 355 +++R EILP+Y+ L Q R+F R+IV+ATN+AETSL Sbjct: 611 RIVDMRVKRKGSIMQDILADVEILPIYSALPADIQGRIFNKSDAKKRKIVVATNIAETSL 670 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+ GIKYVID G +++ Y+ R + L I PIS A+A QR GR GR GI RLY+E+ Sbjct: 671 TIDGIKYVIDCGYSKLKVYNPRIGLYNLAITPISLANAQQRSGRAGRTGPGIAYRLYTEN 730 Query: 416 DFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 ++ P+ + PEI RT+LASV+L + +LG+ DI FPF+++P + + L LG Sbjct: 731 TAIADMHPQ-SIPEIQRTSLASVLLLLKSLGIEDIFNFPFMDSPPSATLMTSMFELWTLG 789 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ + LT +G ++++ P+ P L++++L + K+GC E + I S LS+ R Sbjct: 790 ALD-----NFGALTEMGSKMAKFPLQPSLSKILLLSAKYGCSEEMVTIVSMLSVPQIFYR 844 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P ++Q+ SD+ RF ESD L +N++ + +L CR +YL Y +R Sbjct: 845 PKERQKESDQARNRFVVPESDHLTLLNVFVQWKVHRYSLD------WCRKNYLQYRSLRR 898 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA-RF 652 DI QL + + + +P+ S + + + + G + H + + +Y +N Sbjct: 899 AYDIREQLIRAMLKEDVPIISSGSGWDILRKCICAGYV-HQAARKSGLNQYVHLKNGMEL 957 Query: 653 SIFPGSGL--FKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + P S L P +V+ EL+ T++ + + +DP W+ Sbjct: 958 KLHPTSALAGMGDLPPYVVYHELLLTTKEYINLVTAVDPFWL 999 >UniRef50_O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=75 Tax=Eukaryota RepID=DHX16_HUMAN Length = 1041 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 228/646 (35%), Positives = 365/646 (56%), Gaps = 31/646 (4%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLA 134 +LPV ++++L AI +HQV+I+ GETGSGKTTQ+P+ E G KG+ I TQPRR+A Sbjct: 398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 457 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A E+ + G +GY +RF D S+ T+++ MTDG+LL E + L Y + Sbjct: 458 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 517 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+L+ D L G +K++ RP+LK+++ SAT+D RFS F++AP+ + GR + Sbjct: 518 MVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRF 577 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK- 312 PV++ Y E D L+A +V ++ + GDIL+F++G+ EI + L Sbjct: 578 PVDIFY------TKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 631 Query: 313 -----LNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVID 365 +R +LP+YA L + Q R+FQ R++V+ATN+AETSLT+ GI YV+D Sbjct: 632 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 691 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFT 424 PG + Y+ RT ++ L + P S+ASANQR GR GRV+ G C RLY+ + E T Sbjct: 692 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 751 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI RT+L +V+L + +LG+ D+ F F++ P + + L LGA+ Sbjct: 752 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALN-----HLG 806 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP-RERPMDKQQASDE 543 +LT GR++++LPVDP L++M+L ++K+ C E + + + LS+ + RP DK +D Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 866 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 F D L +N++ E S + C +++ + +R +D+ QL Sbjct: 867 ARVNFFLPGGDHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEG 920 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 +++ + + ++S +Y + A+ G H + F I P S LF++ Sbjct: 921 LLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGYRTVKQQQTVF-IHPNSSLFEQ 979 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK-RTYSEPH 708 P+W++ ELV T++ + R I+ W+ VA H K + +PH Sbjct: 980 QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPH 1025 >UniRef50_B0JZ95 Dhx16 protein n=5 Tax=Fungi/Metazoa group RepID=B0JZ95_XENTR Length = 1016 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 234/655 (35%), Positives = 374/655 (57%), Gaps = 33/655 (5%) Query: 62 LLREAARPEITYPD---NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG 118 +L E+ R +++ + +LPV + D+L+AI DHQ++I+ GETGSGKTTQ+P+ E G Sbjct: 356 VLSESERKKLSIQEVRRSLPVFPYRSDLLQAISDHQILIIEGETGSGKTTQIPQYLHEHG 415 Query: 119 RGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 GL IG TQPRR+AA +V+ R+++E+ + G +GY +RF D S+ T++K MTDG+ Sbjct: 416 YTKNGLKIGCTQPRRVAAMSVSARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGM 475 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LL E + L Y IIIDEAHER+L+ D L G +K++ R DLK+++ SAT++ ERF Sbjct: 476 LLREFLTEPDLASYSVIIIDEAHERTLHTDVLFGLIKDIARFRQDLKVLVASATLNTERF 535 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIF 296 S F++AP+ + GR YPV++ Y E D L+A +V ++ + GDIL+F Sbjct: 536 SSFFDDAPVFRIPGRRYPVDIYY------TKAPEADYLEACVVSVLQIHVTQPPGDILVF 589 Query: 297 MSGEREIRDTADALN----KLNLRHTE--ILPLYARLSNSEQNRVFQSH--SGRRIVLAT 348 ++G+ EI + L +L + E +LP+YA L + Q ++F+ R++V+AT Sbjct: 590 LTGQEEIETCCEMLQERCRRLGSKIAEMLVLPIYANLPSDMQAKIFEPTPPGARKVVIAT 649 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLT+ GI YVIDPG + Y+ R+ ++ L + P S+ASANQR GR GRV+ G C Sbjct: 650 NIAETSLTIDGIIYVIDPGFCKQKSYNARSGMESLIVTPCSKASANQRAGRAGRVAAGKC 709 Query: 409 IRLYSEDDFLSRPEFTD-PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 RLY+ + + E T PEI RTNL +V+L + +LG+ D+ F F++ P + + Sbjct: 710 FRLYTAWAYKNEMEDTTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALE 769 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L LGA+ +LT LGR++++LPVDP L++++L ++++GC + + I + LS+ Sbjct: 770 QLYALGALN-----HLGELTKLGRRMAELPVDPMLSKIILASEQYGCSEQILTIAAMLSV 824 Query: 528 QDP-RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 + RP DK +D F D + +N++ E +L + C +++ Sbjct: 825 NNTIFYRPKDKLVHADTARANFTVPGGDHMVLLNVYTQWVESGHSL------QWCYENFI 878 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 +R +D+ QL ++ + I + S + + A+ G H + Sbjct: 879 QARSLRRARDVREQLEGLMGRIEIELTSCEGDSIPVRKAITAGYFYHTARLTRSGYKTVK 938 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + A + I P S L ++ P+WV+ ELV T++ + R ID W+ VA H K Sbjct: 939 QQQAVY-IHPNSSLHEEQPRWVIYHELVFTTKEYMRQIIEIDSTWLLEVAPHYYK 992 >UniRef50_A2EN72 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EN72_TRIVA Length = 890 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 243/658 (36%), Positives = 362/658 (55%), Gaps = 48/658 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ ++ IL+ I ++ VVI+ GETGSGKTTQL + E G G G I TQPRR+AA Sbjct: 189 LPIMDFREKILKVISENSVVIIVGETGSGKTTQLTQFFYEDGYGKFGQIVCTQPRRVAAC 248 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A R+A+E+ E GG +GY +RF + +SD T++K MTDGILL E + L +Y II+ Sbjct: 249 SIAKRVADEMGVELGGLVGYAIRFEEALSDKTIIKYMTDGILLRESLNEDDLYKYSVIIM 308 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+LN D L G LK++L RR DLK+I+TSAT+D +FS++F API + GRTY V Sbjct: 309 DEAHERALNTDVLFGVLKKILSRRSDLKVIVTSATMDASKFSKYFGGAPIFHIQGRTYDV 368 Query: 257 E---VRYRPIVEEADDTERDQL-QAIFDAVDELSQESHGDILIFMSGEREIRDTA----D 308 E +R P +D + +A+ A +ES GDILIFM+G+ ++ T + Sbjct: 369 EPFFLRSNP---------QDYVYEAVRQACSIHLKESPGDILIFMTGQDDVECTCQLIRE 419 Query: 309 ALNKL-NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 L K+ N + P+Y++L +Q +VF++ R+ V+ATN+AETSLT+ GI+YVID G Sbjct: 420 HLAKIENAPEMAVFPIYSQLPVEQQAKVFENLKIRKCVVATNIAETSLTIDGIRYVIDSG 479 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDP 426 + YS + + L ++PISQA+A QR GR GR SEG C RL++E F T P Sbjct: 480 FCKQKSYSSKAGLDTLLVQPISQAAATQRMGRAGRTSEGKCWRLFTETSFKYEMLPMTIP 539 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 E+ RTNLA+VIL + +LG D+ +F F++ P N + L L A+ + KL Sbjct: 540 EVQRTNLANVILLLKSLGFDDVLSFDFMDPPPLDNFLHAMNQLWSLRALDNEG-----KL 594 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T LG+ + Q P+DP L++M+L K GC+ E + I S LS+ + +P +++ +D Sbjct: 595 TKLGKDMVQFPLDPTLSKMLLVGNKFGCLEEILTIVSMLSVSEIFYKPHGREEEADAMRM 654 Query: 547 RFHDKESDFLAFV---NLWNYLG---------EQQKALSSNAFRRLCRTDYLNYLRVREW 594 +F ESD L + NLW G EQ++A+ + +L+ + + + Sbjct: 655 KFLVPESDHLTMLNVFNLWFNAGLNRPTKKEQEQERAI-------FAKRHFLHNVTLCKA 707 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEYREI-HIALLTGLLSHIGMKDADKQEYTGARNARFS 653 DI QL + + G+ ++ E +I + + H Y Sbjct: 708 LDIRQQLEDIALQGGMKMSHCGLENWDIVRKVICSSYFHHAAHLKNLSTYYNIQTGVECI 767 Query: 654 IFPGSGL--FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT--YSEP 707 + P S L P++++ ELV T R + IDP W+ +A T Y P Sbjct: 768 VHPTSSLAGLSYIPEYIVYHELVLTKRHYLHGVTAIDPLWLSQMAPEFFTATDLYGNP 825 >UniRef50_Q03319 Probable ATP-dependent RNA helicase prh1 n=2 Tax=Schizosaccharomyces RepID=PRH1_SCHPO Length = 719 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 244/715 (34%), Positives = 390/715 (54%), Gaps = 50/715 (6%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQ--------AIFQEMAKEIDQAAGKVLLREAARPE-- 70 L D L +R+ K KN A + ++ + ++ D A +V+ + + PE Sbjct: 19 LTDGLVGGQRIKAPNKKKNRKASKNTTKKSTVSVVNFLEQDTDFGANEVVGSDNSSPEKR 78 Query: 71 -----------ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + NLP+ + + + I+D++V++V GETGSGK+TQ+P+ E Sbjct: 79 SENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPY 138 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 +G + TQPRR+AA +A R+A E G +GY +RF D S T +K +TDG+LL Sbjct: 139 AQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLL 198 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 E+ D +L QY T+I+DEAHER+L D LLG++K+++ +RP L++II SAT++ ERFS Sbjct: 199 RELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSE 258 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMS 298 F+ A I +SGR YPV++ Y E D L A + +L ++ GDIL+F++ Sbjct: 259 FFDGAEICYISGRQYPVQIHY------TYTPEPDYLDACLRTIFQLHTKLPPGDILVFLT 312 Query: 299 GEREIRDTADALNK-------LNLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATN 349 G+ EI + +AL K NL + PL+A L +Q +VF + R++VL+TN Sbjct: 313 GQDEI-EALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTN 371 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AETS+T+ GI+YVID G A+I +++ + ++ L ++PISQ++A QR GR GR + G C Sbjct: 372 IAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCY 431 Query: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 R+Y+E DF P+ T PEI R +L+ +L + A G D+ F +++ P K + + L Sbjct: 432 RIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHL 491 Query: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 +GA+ + + LG Q+S +P+ P LAR VL A++H C+ E + + S LS Sbjct: 492 YSIGALDDNGH-----INDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDS 546 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVN-LWNYLGEQQKALSSNAFRRLCRTDYLNY 588 P +K+ + E +F E D L +N L YL S ++ ++ C +++N Sbjct: 547 MFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLES-----SHDSRKQWCSQNFINR 601 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE-IHIALLTGLLSHIGMKDADKQEYTGA 647 ++ DI QLR+ + G +NS P E + ++ L+G +++ + D T Sbjct: 602 RALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGSYRTII 661 Query: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 N SI P S LF K + +M ELV T++ + R + I W+ VA H + R Sbjct: 662 GNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLAR 716 >UniRef50_A7ASE9 RNA helicase, putative n=1 Tax=Babesia bovis RepID=A7ASE9_BABBO Length = 931 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/646 (35%), Positives = 373/646 (57%), Gaps = 35/646 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + ++L A+R+H +++V GETGSGKTTQ+P+ E+G G G IG TQPRR+AA Sbjct: 293 LPIYGYRHELLAAVRNHPILVVVGETGSGKTTQIPQYLYEVGYGKAGKIGCTQPRRVAAM 352 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+A+E+ T+ G +GY +RF D S+ T+VK MTDG+LL E+ + L Y ++I Sbjct: 353 SVATRVAQEVGTKLGQEVGYSIRFEDCTSNQTVVKYMTDGMLLREMMTEPDLSSYSVMMI 412 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+++ D + G +K+L R D ++I+ SAT++ E+F+ +F++API + GR +PV Sbjct: 413 DEAHERTVHTDIIFGLVKDLCRYRDDFRLIVASATLEAEKFALYFDHAPIFRIPGRRFPV 472 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSG-EREIRDTADALNKL- 313 ++ Y E + L A V ++ + GDIL+F+ G + + N+L Sbjct: 473 QIYY------TKAPEANFLDASVITVLQIHITQPLGDILVFLPGQQEIEEVQEELQNRLR 526 Query: 314 ----NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPG 367 ++R +LP+YA L + Q ++F+ + R+ +LATN+AETS+T+ I YVID G Sbjct: 527 NRGKDMRELIVLPVYATLPSDMQAKIFEPTPPNARKAILATNIAETSITLNEIVYVIDCG 586 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFTDP 426 +++ YS +T ++ L P S+ASANQR GR GRV G C RLY++ + + DP Sbjct: 587 FCKMNSYSPKTGMESLVTVPCSKASANQRTGRAGRVRPGHCFRLYTKFSYEKEMDDVNDP 646 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI R+NLA V+L + ALG+ D+ F F++ P + + L+ LGA+ + L Sbjct: 647 EIQRSNLAHVVLSLKALGIDDLINFDFMDPPAPETLIKALELIYALGALNDKGE-----L 701 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQASDEKH 545 T GR++++LP+DP ++M+L ++K+ C E + I + L + + RP DKQ +D H Sbjct: 702 TRTGRRMAELPMDPTYSKMLLASEKYKCSNEIITICAMLGVGNNIFYRPKDKQLHADNAH 761 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 + F D L +N++N + +++ C +++ + +R +DI QL +++ Sbjct: 762 KNFFRVGGDHLVLMNVYNQWEDTDFSVA------WCYENFVQHKSLRRARDIREQLVELM 815 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQ--EYTGARNAR-FSIFPGSGLFK 662 K + + V S + I +A+ GL + ++ K Y +N + I P S LF Sbjct: 816 KRVEVEVISNCNDTDAILMAVTAGLFTQAAVRSGPKNNASYRTLKNPQNVDIHPQSSLFD 875 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPH 708 + + V+ +LV T+R + RI A+I PEW+ +A H YS H Sbjct: 876 QDAQCVVYTDLVMTTRQYMRIVAQIRPEWLSQLAPHY----YSSDH 917 >UniRef50_Q10752 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 n=162 Tax=Eukaryota RepID=CDC28_SCHPO Length = 1055 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 233/641 (36%), Positives = 366/641 (57%), Gaps = 33/641 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG--RGIKGLIGHTQPRRL 133 +LPV Q K D+L+AI ++QV+++ ETGSGKTTQLP+ E G +G K I TQPRR+ Sbjct: 417 SLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKK-ICCTQPRRV 475 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA +VA R+A+E+ G +GY +RF + S+ T++K +TDG+LL E + L Y Sbjct: 476 AAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSV 535 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 IIIDEAHER+L+ D L G +K++ RPDLK++I+SATID E+FS +F+ AP+ V GR Sbjct: 536 IIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRR 595 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALNK 312 YPV++ Y P E + +QA + ++ + + GDIL+F++G+ EI ++ + + Sbjct: 596 YPVDIYYTP------QPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649 Query: 313 ----LNLRHTEIL--PLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVI 364 L R EI+ P+YA L + Q ++F R++VLATN+AETS+T+ G+ +VI Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVI 709 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF- 423 D G + + Y+ RT ++ L P S+ASA+QR GR GRV G C RLY+ + + + Sbjct: 710 DSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMV 769 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 T PEI RTNL +++L + +LG+ ++ F F++AP + + LL LGA+ + Sbjct: 770 TSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGE--- 826 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS-IQDPRERPMDKQQASD 542 LT LGRQ+++ P DP L++ ++ + K+GCV E + I S L RP DK +D Sbjct: 827 --LTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEAD 884 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 + F D L +++WN + + ++ R ++L Y + +D+ QL Sbjct: 885 KARANFTQPGGDHLTLLHIWN------EWVDTDFSYNWARENFLQYKSLCRARDVRDQLA 938 Query: 603 QVVKELGIPVNSEPAEYRE-IHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFPGSGL 660 + + + I + + +E + I A+ G S+ D Y T N I P S + Sbjct: 939 NLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSV 998 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 +K PK ++ ELV T++ + R I PEW+ ++ H K Sbjct: 999 AEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFK 1039 >UniRef50_C4QXH4 DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase n=1 Tax=Pichia pastoris GS115 RepID=C4QXH4_PICPG Length = 1005 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/633 (36%), Positives = 367/633 (57%), Gaps = 34/633 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG--LIGHTQPRR 132 ++LPV KQ +LE +++++ V++ GETGSGKTTQ+ + E G KG +IG TQPRR Sbjct: 349 ESLPVFSMKQMLLETVKNNKFVVIVGETGSGKTTQITQYLAEEGFN-KGNMIIGCTQPRR 407 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AA +VA R++EE+ G +GY +RF D+ SD T +K MTDG+L E D++L +Y Sbjct: 408 VAAVSVAKRVSEEVGCRLGQEVGYTIRFEDNTSDVTKIKYMTDGMLQREAMVDKMLSKYS 467 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGR 252 I++DEAHER++ D L LK +R DLKII+TSAT+D +FS +F N PII++ GR Sbjct: 468 VIMLDEAHERTIATDVLFVLLKTAAMKRDDLKIIVTSATLDSGKFSTYFENCPIIQIPGR 527 Query: 253 TYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADAL- 310 T+PVE+ Y + E D LQA + V + + ES GDIL+F++G+ EI + L Sbjct: 528 TFPVEIFY------TKEPELDYLQATLECVLSIHKNESRGDILVFLTGQEEIDTCCEVLY 581 Query: 311 NKLNLRHTE----ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVI 364 KL H E ILP+Y+ L + Q+++F+ R++++ATN+AETS+T+ GI YVI Sbjct: 582 EKLIDLHQENELIILPIYSSLPSEMQSKIFEPTPVGKRKVIIATNIAETSITIDGIYYVI 641 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR--PE 422 DPG +++ Y + + L + PISQA A QR GR GR G C RLY+E + P Sbjct: 642 DPGFVKVNAYDPKLGMDSLMVTPISQAQAKQRAGRAGRTGPGKCFRLYTETGYNKEMLPN 701 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 + PEI R NLA IL + A+G+ D+ F F++ P + + + L L A+T D Sbjct: 702 -SIPEIQRQNLAHTILMLKAMGVQDLIGFEFMDPPPLKTMLSALEELYNLEALTEDGD-- 758 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK-QQAS 541 LT LGR+++ P+DP LA++++++ + GC E + I S LS+Q RP + ++ + Sbjct: 759 ---LTELGRRMADFPMDPGLAKVLIKSIEFGCSEEMLSIVSMLSVQSIFYRPTGELRKKA 815 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 DEK RF+ D + +N++ +K + + + + C+ ++++Y + +D+ TQL Sbjct: 816 DEKRVRFNHPHGDHMTMLNVY------EKWVRNGSSKEWCKDNFIHYRSLLRVRDVRTQL 869 Query: 602 RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFP-GSG 659 ++++ + G + S I + L G + KD++ Y T N + P S Sbjct: 870 KKIMNKYGSEMRSCGQNSNLIRVNLCCGFFKNTAKKDSETSCYKTLLENTTVYLHPSSSL 929 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 K ++V+ L+ T++ + + I+P W+ Sbjct: 930 FGKSSSEYVIYHTLLLTTKEYMHCVSVIEPTWL 962 >UniRef50_B0ECA9 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative n=2 Tax=Entamoeba RepID=B0ECA9_ENTDI Length = 845 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/641 (35%), Positives = 371/641 (57%), Gaps = 35/641 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LP+ KK++I+ +I+++Q+ I+ GETGSGKTTQ+ + ME G G G IG TQPRR+A Sbjct: 224 EELPIFFKKKEIIRSIKENQINIIIGETGSGKTTQIAQYLMEEGIGKNGKIGCTQPRRVA 283 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R++EE+ ++ G +GY +RF D S T +K MTDGILL E+ +D +L +Y I Sbjct: 284 AVSVAQRVSEEVGSKLGEEVGYLIRFEDKTSKKTKIKFMTDGILLREVIKDPMLEEYSVI 343 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DE HERSLN D L G +K ++ R DLK+IIT+ATI+ + F PII + GRT+ Sbjct: 344 IMDEVHERSLNTDILFGIIKRIIQERNDLKLIITTATINENKLIEFFGIIPIIHIEGRTF 403 Query: 255 PVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDTADAL--- 310 PV V Y T +D ++ AI + + GDIL+FM+G+ +I + + L Sbjct: 404 PVSVEY------LKTTPKDYIEMAIKQILSIHMNQEKGDILVFMTGQEDIEVSCELLKEK 457 Query: 311 ----NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDP 366 + + EI+P+Y++LSN Q ++F + R+++++TN+AETSLTV GIKYVID Sbjct: 458 YKEIKEEKKQEIEIIPIYSQLSNEAQKKIFIKSNKRKVIISTNIAETSLTVKGIKYVIDS 517 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF----LSRPE 422 G + Y+ + ++ L I P S+ +A QRKGR GR GIC RL++E+ F L P Sbjct: 518 GLGKWKIYNPKIGMETLQIFPESKQNAEQRKGRAGRTETGICYRLFTENTFKYELLESP- 576 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 PEI R+NL +VIL++ A+G+ DI ++ P++ I + + L LGA+ DE + Sbjct: 577 --IPEIQRSNLNNVILELKAIGINDINKIELIDKPNEERILNSMYELWILGAL--DEIGN 632 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 +T LG+++ +LP++P L++MV+ +QK C++E + I + L++ + RP ++++ +D Sbjct: 633 ---ITKLGKEMVELPLEPSLSKMVIISQKFECIKEVLTIVAMLTVPNIFIRPKEREKEAD 689 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 +F+ +SD + +N++N E ++ + C +Y+N + + +DI QL+ Sbjct: 690 ISREKFYQPDSDHITLINVYNQWKEHEEN------EQWCNKNYINSKAMNKAKDIRNQLK 743 Query: 603 QVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662 ++ + GI S ++ +T + K K + I P S LF Sbjct: 744 DLINKKGINEISCGRNLDKLK-KCITASYFYNAAKLKGKNYINLRTGVQCLIHPTSALFN 802 Query: 663 K--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 K+V+ EL+ T++ + R I+ +W+ + + K Sbjct: 803 MGFKSKYVIYHELLLTTKSYMRCITSIEGKWLPELGEIFFK 843 >UniRef50_UPI000186CCEB ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CCEB Length = 695 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/632 (35%), Positives = 364/632 (57%), Gaps = 33/632 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LPV +Q ++ I H+++I+ GETG GKTTQ+P+ E +IG TQPRR+AA Sbjct: 64 LPVYNARQRLINLIEKHEILIIIGETGCGKTTQIPQFIFEERINGSKMIGVTQPRRVAAT 123 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 T++ R+AEE+ T G +GY +RF D S NT +K +TDG+LL E D LMQY+ II+ Sbjct: 124 TLSARVAEEMNTVLGETVGYSIRFEDLTSHNTKIKFLTDGMLLREAILDDKLMQYNFIIL 183 Query: 197 DEAHERSLNIDFLLGYLKELLPRR-----PDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 DEAHER+++ D L G +K+ R P LK+II SAT+D + FS +F + P++ + G Sbjct: 184 DEAHERTIHTDVLFGIIKKAHKTRKERGLPILKVIIMSATMDVDHFSSYFGDVPVVYLEG 243 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES--HGDILIFMSGEREIRDTADA 309 R Y VEV + V+ DD L +F ++ QE+ + DIL+F++G+ EI A Sbjct: 244 RQYSVEVLHA--VQSQDDYLFSSLVTVF----QIHQEAPPNEDILVFLTGQEEIESFAFK 297 Query: 310 LNKL--NLRHT----EILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIK 361 + + +L + ++LPLY+ L + + F+ H R+IV++TN+AETS+T+PGIK Sbjct: 298 VKSIVKDLENMTPPLKVLPLYSSLPSLQLAEAFKPTPHGLRKIVISTNIAETSVTIPGIK 357 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVID G + ++ T + L + ISQA A QR GR GR S G C R++++D+F Sbjct: 358 YVIDSGKVKAKMFNPITGLDMLQVRTISQAQAWQRSGRAGRDSSGHCYRIFTKDEFDKFD 417 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 + + PEILR NLASV LQ+ LG+ +I F F++ P K +++ + L+ LGAI E+ Sbjct: 418 KNSQPEILRCNLASVSLQLLTLGI-NILNFDFMDKPPKESLKSALTELKLLGAIDCVEKP 476 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 +LT LG+Q++Q P+DPR ++++L A +GC+ E + I + LS + + K+ + Sbjct: 477 ---QLTKLGKQMAQFPIDPRYSKILLSAIDYGCLDEIITIIALLSGESVLIHSLTKRDEA 533 Query: 542 DEKHRRFHDKESDFLAFVNLW-NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 E H++F D + +N++ N+ Q+ ++ C ++L++ + ++ Q Sbjct: 534 KEAHKKFLSSSGDHITLLNVFRNFKKMSQQ-------KQWCHENFLHFRNLVYASNVRKQ 586 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L ++ K I + S + +I L+TGL ++ DK+ + SI P S L Sbjct: 587 LVEICKRNDITITSCNSNIDQIRKCLVTGLFMNVAELQLDKKYMMLSTRQMVSIHPTSVL 646 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 P V+ +E+V T++ + R IDP+W+ Sbjct: 647 GGTLPHCVLFSEVVHTTKCYIRQLTVIDPDWL 678 >UniRef50_Q9H5Z1 Probable ATP-dependent RNA helicase DHX35 n=44 Tax=cellular organisms RepID=DHX35_HUMAN Length = 703 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/653 (34%), Positives = 374/653 (57%), Gaps = 46/653 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LPV + + IL I ++Q V++ GETG GK+TQ+P+ E G +G ++G TQPRR+AA Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSD-NTMVKLMTDGILLAEIQQDRLLMQYDTI 194 TVA R+AEE G +GY +RF D T +K +TDG+L+ E+ D LL +Y I Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVI 173 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----------NA 244 ++DEAHER+L D +G LK++ +R DL++I+ SAT+D ++F FN Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTC 233 Query: 245 PIIEVSGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGER 301 I+ V GRT+PV++ Y P+ D +++ + V ++ Q E GD+L F++G+ Sbjct: 234 VILTVEGRTFPVDIFYLQSPV--------PDYIKSTVETVVKIHQTEGDGDVLAFLTGQE 285 Query: 302 EIR-------DTADALNKLNL-RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVA 351 E+ + A AL + + RH +LP+YA L + EQ +VF+ S S R++++ATNVA Sbjct: 286 EVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVA 345 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETS+T+ GI YVID G ++ Y+ RT ++ L + P+SQASANQR GR GR G C RL Sbjct: 346 ETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRL 405 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 Y+E+ F P+ T PE+ R+NLA VILQ+ ALG+ ++ F F+ P +++ + LL Sbjct: 406 YTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYA 465 Query: 472 LGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 LG + D +LT PLG ++++ P++P A+M+LE+ GC +E + I + + IQ+ Sbjct: 466 LGGLDKD-----CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNI 520 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 P +++ + HR+F +E D L +N++ + + N + C+ +LNY Sbjct: 521 FVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIY------EAFIKHNKDSKWCQEHFLNYKG 574 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 + + QL++++ + +P S + + +++G ++ + T + Sbjct: 575 LVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDH 634 Query: 651 RFSIFPGSGLF-KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 I P S L+ +KPP+WV+ E+++TS+ + R I+ W+ +A H ++ Sbjct: 635 ELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQ 687 >UniRef50_C4QXR9 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QXR9_PICPG Length = 967 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 229/635 (36%), Positives = 356/635 (56%), Gaps = 42/635 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP ++D++ IR++Q+V+V GETGSGKTTQL + E G +G+IG TQPRR+AA Sbjct: 295 LPAFTVREDLIRTIRENQIVVVIGETGSGKTTQLTQFLYEEGFYKRGIIGCTQPRRVAAM 354 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE+ + G +G+ +RF D S TM+K MTDG+LL E D L +Y II+ Sbjct: 355 SVAKRVSEEMGVKLGNEVGFTIRFEDRTSPRTMIKYMTDGVLLRETLLDSGLEKYSCIIM 414 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLN D LLG K++L +R DL++IITSAT++ RFS F NA + GRT+PV Sbjct: 415 DEAHERSLNTDILLGLFKKILTKRRDLRLIITSATMNASRFSEFFGNADTFTIPGRTFPV 474 Query: 257 EVRYR--PIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL- 313 ++++ P+ + D + L+ + + GDIL+FM+G+ +I T L + Sbjct: 475 DIQFSKYPVADYVDAAIKQVLKIHYG-------KKPGDILVFMTGQEDIEATCQVLQERI 527 Query: 314 --------NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 N ILP+Y+ L Q +VF R+ ++ATN+AETSLTV GI +V+D Sbjct: 528 EEIEEDAENKNPLSILPIYSSLPADLQAKVFGRSEVRKCIVATNIAETSLTVDGIVFVVD 587 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS----EDDFLSRP 421 G ++ YS + + L + PIS A ANQR GR GR G+ RLY+ E + +P Sbjct: 588 AGLCKLKVYSSKLGMDILQLAPISFAQANQRSGRAGRTGPGVAYRLYTLTEAEKEMYVQP 647 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PEI RTNLA+ +L + +LG+ ++ FPF++ P I + L L AI Sbjct: 648 ---IPEIQRTNLANTLLLIKSLGVDNLLDFPFIDPPPHATIYSSLYDLWCLDAID----- 699 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 + LT LG +++ P++P L++M++++ + C E II + LS+ + RP ++Q+ S Sbjct: 700 NLGALTDLGHKMTSFPMEPVLSKMLIKSHEFKCSTEMCIIVAMLSVPNVFYRPKERQKES 759 Query: 542 DEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 D RF ESD L +N++N +L + A R C ++L+ +R Q+I Q Sbjct: 760 DRSRERFFIPESDHLTLLNVYNQWLNHRNSA-------RWCVQNFLHEKSLRRAQEIELQ 812 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA-RFSIFPGSG 659 L+ ++ + G+ S ++ I + + L + + EYT R+ + P S Sbjct: 813 LQSIMMQQGMACRSIGRQWDPIQECICSCLFVN-AARFKKFGEYTNLRSVMSMVLHPTSS 871 Query: 660 LFKKP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 L+ P++V+ EL+ TSR + + + PEW+ Sbjct: 872 LYGTADLPEYVVFQELLLTSREYMNVVTAVKPEWL 906 >UniRef50_B6JZW3 ATP-dependent RNA helicase Prp16 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JZW3_SCHJY Length = 1176 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 238/636 (37%), Positives = 360/636 (56%), Gaps = 46/636 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP ++ +L IRD+QV +V GETGSGKTTQL + E G+G G+IG TQPRR+AA Sbjct: 494 LPAFAVREQLLSIIRDNQVTVVVGETGSGKTTQLAQFLYEDGQGKLGMIGCTQPRRVAAM 553 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE--IQQDRLLMQYDTI 194 +VA R++EE+ + G +GY +RF D S T++K MTDG+LL E +Q D L +Y I Sbjct: 554 SVAKRVSEEMGVQLGTLVGYSIRFEDVTSPQTIIKYMTDGVLLRESLVQND--LDRYSVI 611 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHERSLN D L+G L+ +L RR DLK+I+TSAT++ +RFS F AP + GRTY Sbjct: 612 IMDEAHERSLNTDILMGLLRTILSRRRDLKLIVTSATMNAQRFSEFFGGAPQFTIPGRTY 671 Query: 255 PVEVRYR--PIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK 312 PV+V + P + + R LQ +SQ + GDIL+FM+G+ +I T D + + Sbjct: 672 PVDVLFSKAPCSDYVEAAVRQVLQI------HVSQPA-GDILVFMTGQEDIEVTCDVIKE 724 Query: 313 LNLRHTE-----ILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVID 365 + T+ +LP+Y+++ Q ++F + R++V+ATN+AETSLTV GI YV+D Sbjct: 725 RLAQLTDAAPLSVLPIYSQMPADLQTKIFDAAEPGVRKVVVATNIAETSLTVDGISYVVD 784 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF-- 423 G ++ Y+ + + L I PISQA+ANQR GR GR G+ RLY+E F+ R F Sbjct: 785 TGFCKLKMYNAKMGIDTLQITPISQANANQRSGRAGRTGPGVAYRLYTESAFV-REMFQT 843 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 T PEI RTNL++ +L + +LG+ +I F F++ P + L LGA+ + Sbjct: 844 TLPEIQRTNLSNTVLLLKSLGVKNIMDFDFMDRPPAATLTTSSYELWTLGALD-----NF 898 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 LT LG +++ P+DP LA++++ A ++GC E + I S LS+ RP ++ + SD Sbjct: 899 GNLTALGSKMANFPMDPSLAKLLIIAAEYGCSNEVLTIVSMLSVPSVFYRPKERLEESDA 958 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 +FH ESD L +N+ YL ++ S C +L+ + + I QL Sbjct: 959 AREKFHVPESDHLTLLNI--YLQWERNHCSVA----WCTKHFLHSRSLSRARSIRDQLLD 1012 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR-------NARFSIFP 656 ++K +P+ S +++ I L + + EY R +A S++ Sbjct: 1013 IMKFQKLPIVSCKSDWDVIRKVLCSAYFNQAATAKG-IGEYVHLRTGMPCHLHATSSLY- 1070 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 G G P +V+ ELV TS+ + + +DP W+ Sbjct: 1071 GLGYL---PDYVIYHELVLTSKEYMNVVTSVDPYWL 1103 >UniRef50_A4S4Y0 Predicted protein n=3 Tax=Mamiellales RepID=A4S4Y0_OSTLU Length = 679 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 227/653 (34%), Positives = 361/653 (55%), Gaps = 44/653 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC---MELGRGIKGLIGHTQPRR 132 +LP+ + K ++E IR + VI+ GETGSGKTTQ+P+ M L G+ +IG TQPRR Sbjct: 41 SLPIYRAKDRLMEEIRKSETVIIIGETGSGKTTQIPQYVYEDMTLTNGL--MIGVTQPRR 98 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AA +V+ R+A+E T G +GY +RF D S+ T +K +TDG+LL E D LL +Y Sbjct: 99 VAAVSVSRRVADETGTAHGTLVGYAIRFEDVSSEETRIKFLTDGMLLREAVGDPLLSKYG 158 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRR-------------PDLKIIITSATIDPERFSR 239 I+IDEAHER+L DFLLG +K + RR P L++I+ SAT++ FS+ Sbjct: 159 VIMIDEAHERTLQTDFLLGTIKGVQRRRRESLGEDQYGRALPPLRVIVMSATLEASSFSK 218 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMS 298 F+ AP+I GRT+PVE+ Y ++ E D L A V ++++E + GD+L+F++ Sbjct: 219 FFDGAPVIYSRGRTFPVEMFY------TEEPEEDYLDAAMWTVLQVNEEEAAGDVLVFLT 272 Query: 299 GEREI-------RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATN 349 G+ EI R+ A L N+ ++ L+A L EQ +VF+ R++VLATN Sbjct: 273 GQEEIESLGRMLREKASELPS-NVLKLNVVLLFAALPPEEQMKVFEPTPLGTRKVVLATN 331 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AETSLT+ GI+YV+D G +++ + R+ V L + PI+Q+ A QR GR GR + G C Sbjct: 332 IAETSLTINGIRYVVDSGLSKLRTHHPRSGVDELLVTPIAQSQAQQRAGRAGREAPGKCF 391 Query: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 RLY+E+ S ++ PE+LRTNL+ V+LQ+ A+ + DI +FPF++ P K + + LL Sbjct: 392 RLYTEEIMPSLEKYVKPELLRTNLSGVVLQLKAMQVDDILSFPFIDPPPKEALLRSLELL 451 Query: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 L A+ D KL +G+++++ P++P AR V+ A+ GC E + + S LS Sbjct: 452 YSLDALDDDG-----KLNDVGKKMARFPLEPMAARCVIAAEIEGCAIETLAVLSMLSTDS 506 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 + + + + KE D L + ++N A S R CR +N+ Sbjct: 507 VFQFSREADGQKNVARHKLKRKEGDHLTLLRVFNEF----SACSPKRSRDWCREHQINHR 562 Query: 590 RVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 + + I QL + GI + S ++ + +L++G + K+ D Sbjct: 563 AMTKAVKINEQLTRAAMSQGINLTSCEDDFTLVLRSLVSGFFMNTASKEMDGSFKVFTTG 622 Query: 650 ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 + +I P S +F+ PP+ ++ ELV T++++ R + I W+ +A R Sbjct: 623 QKLTIHPSSVMFQSPPETILFNELVRTNKMYARDVSSIKKSWLSELASKTFSR 675 >UniRef50_B6AHK6 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AHK6_9CRYT Length = 1052 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 235/686 (34%), Positives = 380/686 (55%), Gaps = 66/686 (9%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LPV K+++L I +H +V+V GETGSGKTTQL + E G G+I TQPRR+AA Sbjct: 308 LPVFAMKEELLNLIYEHPIVVVVGETGSGKTTQLTQYLYEAGYSNYGIIACTQPRRVAAV 367 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE+ + G +GY +RF D S T++K MTDG+L+ E D L +Y +I+ Sbjct: 368 SVAKRVSEEMNVKLGTKVGYTIRFEDLTSKETVIKYMTDGVLMRESLTDPELERYSVVIM 427 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSL+ D L G K +L RR D ++I+TSAT+D ++FS F API E+ GRT+PV Sbjct: 428 DEAHERSLSTDVLFGIFKSILRRRRDFRLIVTSATMDSDKFSNFFGRAPIFEIPGRTFPV 487 Query: 257 EVRY-------------RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREI 303 ++Y R ++ R LQ ++ +E+S + GDILIFM+G+ +I Sbjct: 488 TIQYLRTQSEDYIESVVRQCLQIHCSDMRCNLQKSGNS-EEIS--NGGDILIFMTGQEDI 544 Query: 304 RDT----ADALNKL---NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 T A+ ++ L + +LP+Y++L + Q ++FQ R++++ATN+AETSLT Sbjct: 545 EATCWLIAEKMSFLVEDGVSPLLVLPIYSQLPSDLQIKIFQPSIYRKVIVATNIAETSLT 604 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + GI++VID G ++ Y+ + + L + PISQA+A QR GR GR + GIC R+Y+E Sbjct: 605 LQGIRFVIDCGFCKVKVYNPKIGMDSLQVVPISQANAQQRSGRAGRTAPGICYRMYTEKA 664 Query: 417 FLSRPEFTD-PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 FL ++ PEI RTNLA+V+L + LG DI +FPF++AP + +I + L LGA+ Sbjct: 665 FLGEMLTSNIPEIQRTNLANVVLLLKTLGFNDILSFPFMDAPSESSILTSLYQLWSLGAL 724 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 D LT +G +++ P+DP LA+ ++ A + C+ E ++I + LS+ RP Sbjct: 725 DDDGN-----LTNIGNLMAKFPLDPPLAKTLITASELNCISEIIVIVAILSVPTIFFRPR 779 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 +++ SD +F ESD L +N+ YL Q K + N + C +L++ +++ Q Sbjct: 780 GREEESDATREKFVVPESDHLTLLNV--YL--QWKRHNYNP--KWCEKHFLHHKALKKAQ 833 Query: 596 DIYTQLRQ-----------------------VVKELGIPVNSEPA----EYREIHIALLT 628 D++ Q+++ +++ I + EP ++ + ++ + Sbjct: 834 DVFYQIKELYLNVMKDPYLIQKGISNKYNNLIIESHEISTSLEPTLDIKKWDNVRKSICS 893 Query: 629 GLLSHIGMKDADKQEYTGARNARFS-IFPGSGLFKKP--PKWVMVAELVETSRLWGRIAA 685 G H K EY R + + + P S L+ P +++ E++ T + + Sbjct: 894 GCF-HNSAKIRGIGEYVNLRTSMPAYLHPSSSLYNCGYIPDYIVYHEVIVTVKEYMNTVT 952 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWER 711 ++PEW+ VA L + S + R Sbjct: 953 SVEPEWLNEVAPKLFSLSTSNLNNNR 978 >UniRef50_Q9P774 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 n=1 Tax=Schizosaccharomyces pombe RepID=PRP16_SCHPO Length = 1173 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 236/632 (37%), Positives = 359/632 (56%), Gaps = 39/632 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP ++ +L IRD+QV+IV GETGSGKTTQL + E G G+IG TQPRR+AA Sbjct: 492 LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAM 551 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE+ G +GY +RF D +T++K MTDG+LL E L +Y II+ Sbjct: 552 SVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIM 611 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLN D L+G LK++L RR D+K+++TSAT++ ++FS F AP + GRTYPV Sbjct: 612 DEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPV 671 Query: 257 EVRYR--PIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDT----ADAL 310 ++ + P + + R LQ LSQ + GDIL+FM+G+ +I T AD L Sbjct: 672 DIMFAKAPCSDYVEAAVRQVLQI------HLSQPA-GDILVFMTGQEDIEATCEIIADRL 724 Query: 311 NKL-NLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPG 367 N+L + ILP+Y+++ Q ++F S R++V+ATN+AETSLTV GI YV+D G Sbjct: 725 NQLHDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTG 784 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EFTDP 426 ++ Y+ + + L + PISQA+ANQR GR GR GI RLY+E ++ E T P Sbjct: 785 YCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLP 844 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI RTNL++ +L + +LG+ +I+ F F++ P + + L LGA+ + KL Sbjct: 845 EIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALD-----NFGKL 899 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T LG+++S P+DP L+++++ A+ + C E + I S LS+ RP ++ + SD Sbjct: 900 TTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAARE 959 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK 606 +F+ ESD L +N++ + Q+ SN++ C +L+ ++ +DI QL +++ Sbjct: 960 KFNVPESDHLMLLNIYQHW---QRNGYSNSW---CSKHFLHSKTLKRARDIRQQLVEIMS 1013 Query: 607 ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR------FSIFPGSGL 660 + I + E +I +L H EY R+ S G G Sbjct: 1014 KQKISL--ESVSDWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGY 1071 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 P +V+ ELV TS+ + I +DP W+ Sbjct: 1072 L---PDYVIYHELVLTSKEYMNIVTSVDPYWL 1100 >UniRef50_D1H6K3 Whole genome shotgun sequence of line PN40024, scaffold_137.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H6K3_VITVI Length = 1408 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/645 (34%), Positives = 356/645 (55%), Gaps = 36/645 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LP++ ++ ++E ++ + +I+ GETGSGKTTQLP+ + G G +IG TQPRR+AA Sbjct: 767 LPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLPQFLLNGGFCHDGKIIGITQPRRVAA 826 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 TVA R+AEE E G +GY +RF D S +T +K MTDG+LL E D L +Y II Sbjct: 827 VTVAKRVAEECGVELGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFLSRYSVII 886 Query: 196 IDEAHERSLNIDFLLGYLKELLPRR------PDLKIIITSATIDPERFSRHFNNAPIIEV 249 +DEAHER+++ D LLG LK + R P LK+II SA++D FS +F A + + Sbjct: 887 VDEAHERTIHTDVLLGLLKNVQNARCQGVKFPSLKLIIMSASLDARGFSEYFGGARSVYI 946 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTAD 308 GR +PV++ Y E D + A + ++ +E GDIL+F++G+ EI ++ + Sbjct: 947 QGRQFPVDIFY------THHAEPDYVDAALITIFQIHLEEGPGDILVFLTGQEEI-ESVE 999 Query: 309 ALNKLNLRHTE-------ILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPG 359 L + LR +P+++ L + +Q + F R+++LATN+AETS+T+PG Sbjct: 1000 RLVQERLRQLPEGSQKLLTVPIFSSLPSEQQMKAFMPAPAGFRKVILATNIAETSVTIPG 1059 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 IKYVIDPG + Y+ T ++ L I S+A A QR GR GR G C RLY E +F Sbjct: 1060 IKYVIDPGVVKARTYNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPESEFGQ 1119 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 + T+PEI R NL++VILQ+ ALG+ DI F F+E P + I + L LGAIT D Sbjct: 1120 LADSTEPEIKRCNLSNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLFLLGAITDDS 1179 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 + S P+G Q+++LP+DP ++ ++ A + C+ E +I + LS++ P +K + Sbjct: 1180 KLS----DPIGHQMARLPLDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYTPREKLE 1235 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGE--------QQKALSSNAFRRLCRTDYLNYLRV 591 + + F E D + +N++ E K + R+ C+ +++N + Sbjct: 1236 EARTAMKCFSSPEGDHITLINVYRASDEFVEKIKQGNDKEKTEKKLRKWCKENFINSRSL 1295 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 R +DI++Q+R+ +++G+ V S + + L + +K + A Sbjct: 1296 RHARDIHSQIRRHAEQMGLCVASCGDDMLQFRRCLAASFFLNAALKQPEGTYRALASGQS 1355 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 I P S LF+ P+ ++ ELV+T+ + R RID W+ +A Sbjct: 1356 VRIHPSSVLFRTKPECIIFNELVQTNHCYIRNITRIDFLWLPELA 1400 >UniRef50_A7AVM7 DEAH box RNA helicase, putative n=3 Tax=Piroplasmida RepID=A7AVM7_BABBO Length = 1016 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 230/638 (36%), Positives = 355/638 (55%), Gaps = 38/638 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LPV + + ++L I QV++V GETGSGKTTQL + E G +G+IG TQPRR+A Sbjct: 327 EQLPVFKCRDELLSYIGQFQVMVVVGETGSGKTTQLAQFLYESGYYKRGVIGCTQPRRVA 386 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +V R+A E+ + G +GY +RF D S NT VK MTDGILL E D L +Y I Sbjct: 387 AVSVCQRVAAEMGSRVGDLVGYSIRFEDLTSRNTAVKFMTDGILLRETLMDPDLDRYSCI 446 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHERSLN D L G LK ++ RR D+++I+TSAT+D ++F+R F N PI ++ GRT+ Sbjct: 447 IMDEAHERSLNTDVLFGILKSVVARRRDIRVIVTSATMDADKFARFFGNCPIYKIPGRTF 506 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN-- 311 PV + Y D +++ D L E GD+LIFM+G+ +I T + L+ Sbjct: 507 PVRIEY------MRSMGNDYVESAVDKCVSLHISEGPGDVLIFMTGQDDINATCELLDLK 560 Query: 312 ---------KLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKY 362 + +L+ +LP+Y++L + Q RVF+ + R+++++TN+AETSLT+ GIK+ Sbjct: 561 LYKVMQSTTRADLQPFCVLPIYSQLPSELQQRVFKKYPYRKVIVSTNIAETSLTLDGIKF 620 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP- 421 VID G ++ Y+ + + L I P+SQA ANQR GR GR + GIC RLY+E +L+ Sbjct: 621 VIDSGFCKLKVYNPKVGMDSLQITPVSQAGANQRSGRAGRTAPGICYRLYTERTYLNDLF 680 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 E PEI+RTNL +V+L + +L + + F F++ P NI + L LG I DE Sbjct: 681 ENNVPEIMRTNLCNVVLLLKSLKVKRLTEFDFIDPPHAENILSAMLQLWILGGI--DEFG 738 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD----PRERPMDK 537 +LT +GR+L P++P L++M++ + C+ E + + S +S + E + Sbjct: 739 ---ELTDIGRKLVHYPLEPPLSKMMIAGESERCMSEILTVVSVMSAPNVFVVENETDAQR 795 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 + A + +F ESD L +N++ ++ S C L +R ++ Sbjct: 796 ESADNATREKFMVPESDHLTLLNVYKQWCANGRSDS------WCLQYRLQPKSLRRAAEV 849 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN-ARFSIFP 656 QL +V + GI S + ++ A+ +G H K EY+ R+ A + P Sbjct: 850 RQQLLDIVTKQGIEETSCGTNWDQVRRAICSGYF-HNASKLKGLGEYSNLRSFAPCFLHP 908 Query: 657 GSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWV 692 S L+ P +V+ E+V TS+ + R +D EW+ Sbjct: 909 TSALYGMGYTPDYVVYHEVVITSKEYMRHVTAVDAEWL 946 >UniRef50_B2ANS3 Predicted CDS Pa_6_9920 n=3 Tax=Saccharomyceta RepID=B2ANS3_PODAN Length = 1151 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 226/637 (35%), Positives = 347/637 (54%), Gaps = 45/637 (7%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LPV ++ ++ A+R++QV+IV GETGSGKTTQL + E G G+IG TQPRR+A Sbjct: 502 ESLPVFAFREQLINAVRENQVLIVVGETGSGKTTQLTQYLAEAGFTNNGIIGCTQPRRVA 561 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R++EE+ G +GY +RF D S T +K MTDG+L EI D L +Y I Sbjct: 562 AVSVAKRVSEEVGCRLGEEVGYTIRFEDVTSPATKIKYMTDGMLEREILIDPELGRYSVI 621 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER++ D L LK+ + R DLK+I+TSAT+D ++FS +FN PI + GRT+ Sbjct: 622 MLDEAHERTIATDVLFALLKKTMKSRKDLKVIVTSATLDADKFSEYFNACPIFTIPGRTF 681 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL---- 310 PVE+ Y E GDIL+F++G+ EI + + L Sbjct: 682 PVEILY-----------------------SREPEPMGDILLFLTGQEEIDTSCEILFERM 718 Query: 311 NKLNLRHTE--ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDP 366 L E ILP+Y+ L + Q+R+F R++V+ATN+AETS+T+ I YVIDP Sbjct: 719 KALGPSVPELIILPVYSALPSEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVIDP 778 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EFTD 425 G + + Y + + L + PISQA ANQR GR GR G C RLY+E + S T Sbjct: 779 GFVKQNAYDPKLGMDSLIVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTI 838 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI R NL++ IL + A+G+ D+ F F++ P + + L LGA+ D++ Sbjct: 839 PEIQRQNLSNTILMLKAMGINDLIRFDFMDPPPVNTMLTALEELYALGAL--DDEG---L 893 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT LGR+++ P++P L+++++ + GC E + I + L++ RP DKQ +D+K Sbjct: 894 LTRLGRKMADFPMEPSLSKVLISSVDKGCSDEVVSIVAMLNLSTIFYRPKDKQNQADQKK 953 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL-CRTDYLNYLRVREWQDIYTQLRQV 604 +FHD D L +N++N + ++ F C +++ +R +D+ Q+ ++ Sbjct: 954 AKFHDPHGDHLTLLNVYN-------SWKNHGFSPTWCHENFIQARSMRRAKDVRDQIVKI 1006 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 + P+ S E + AL +G + KD + T + P S LF K Sbjct: 1007 MNRHRHPIVSCGRETDRVRQALCSGFFRNTARKDPQEGYKTLTEGTPVYLHPSSALFGKQ 1066 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 +WV+ LV T+R + I+P+W+ A K Sbjct: 1067 AEWVIYHTLVLTTREYMHFTTAIEPKWLIDAAPTFFK 1103 >UniRef50_C5X1W0 Putative uncharacterized protein Sb01g037170 n=2 Tax=Poaceae RepID=C5X1W0_SORBI Length = 692 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 229/646 (35%), Positives = 363/646 (56%), Gaps = 72/646 (11%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL-GRGIKGLIGHTQPRRLA 134 LPV Q+K++ L ++RD+Q +I+ GETGSGKTTQ+P+ +E G + ++ TQPRR+A Sbjct: 64 TLPVWQQKEEFLRSLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPRRVA 123 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +V+ R+AEE+ G +GY +RF D S T++K +TDG+LL E D LL +Y I Sbjct: 124 AMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLEKYKVI 183 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F+ AP+++V GR + Sbjct: 184 VLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPGRLH 243 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNK- 312 PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI D +NK Sbjct: 244 PVEIFY------TQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKE 297 Query: 313 LN-----LRHTEILPLYARLSNSEQNRVFQ---------SHSGRRIVLATNVAETSLTVP 358 +N + +++PLY+ L + Q ++F+ GR+IV++TN+AETSLT+ Sbjct: 298 INNMGDQVGTVKVVPLYSTLPPAMQQKIFEPAPAPLKEGGPPGRKIVVSTNIAETSLTID 357 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI YVIDPG ++ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+E F Sbjct: 358 GIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFN 417 Query: 419 S--RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 +P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L LGA+ Sbjct: 418 EDLQPQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL- 475 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 D++ + LT LG +S+ P+DP++++M EAQK Sbjct: 476 -DDEGN---LTQLGEMMSEFPLDPQMSKM--EAQK------------------------- 504 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 A+DE RF + D L +N+++ + +N + C +++N ++ + Sbjct: 505 ---AADEAKARFGHIDGDHLTLLNVYHAYKQ------NNEDPQWCYENFINSRALKSADN 555 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKDADKQEYTGARNARF 652 + QL +++ + + S RE ++ A+L G + + T N Sbjct: 556 VRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVV 615 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 + P + + K P+WV+ E V T+R + R I EW+ +A H Sbjct: 616 HLHPSNCMDHK-PEWVIYNEYVLTTRNFIRTVTDIGGEWLIDIAPH 660 >UniRef50_B9WE17 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=2 Tax=Candida RepID=B9WE17_CANDC Length = 866 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 237/652 (36%), Positives = 379/652 (58%), Gaps = 51/652 (7%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134 +LPV +++ L+ I ++Q +IV GETGSGKTTQLP+ E G +I TQPRR+A Sbjct: 229 SLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLYEAGYSQNNRIIACTQPRRVA 288 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDT 193 A +VA R+A+E++ + G +GY +RF D+ D TM+K +TDG+LL E QD L +Y Sbjct: 289 ATSVAKRVADEMQVKLGEQVGYNIRFDDNCKDGITMIKYVTDGMLLREFLQDPTLEKYSV 348 Query: 194 IIIDEAHERSLNIDFLLGYLKELL---PRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 I+IDEAHER+L+ + LL LK+++ R+ DLKIII SATI+ E+FS+ FNNAPI+ + Sbjct: 349 IMIDEAHERTLSTEILLSLLKDIIMTTTRKNDLKIIIASATINAEKFSKFFNNAPILNIP 408 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDE--LSQESHGDILIFMSGEREIRDTA- 307 GR +PV++ Y E + +QA + + ++Q GDIL+F++G+ EI Sbjct: 409 GRRFPVKIHY------TKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETMEE 462 Query: 308 ---DALNKLN--LRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGI 360 D++ KL + + +YA L Q ++FQ + R+IVLATN+AETS+T+ GI Sbjct: 463 ILHDSIVKLGDQINPMMVCSIYANLPQELQQKIFQQTPTNTRKIVLATNIAETSITIDGI 522 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 YVIDPG + + Y+ T ++ L + P S+ASA+QR GR GRV G C RL+++ F + Sbjct: 523 SYVIDPGYVKQNVYNPITGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNE 582 Query: 421 PEFT-DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 + PEI R NL SVIL + +LG+ D+ F F++ P K+ I + LL LGA+ Sbjct: 583 LDLNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKQAIIKALNLLYALGALN--- 639 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS-IQDPRERPMDKQ 538 S KLT +G+++S+ P+DP + +L + K ++ + I + L+ + RP DK+ Sbjct: 640 --SQGKLTKIGKKMSEFPLDPIFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKK 697 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 + +D++ + F+D + D +N+W Q+ + S + C+ ++ Y ++ ++IY Sbjct: 698 ELADKRKQEFNDSQGDQFMLLNIW------QQWVDSGYSVQWCQDYFIQYKTMKRIKNIY 751 Query: 599 TQLRQVVKELGIPVNS--EPAEYRE------IHIALLTGLLSHI----GMKDADKQ---E 643 QL ++ +++GI VN+ P E + L++G ++I M D ++ Sbjct: 752 EQLIRLSRKIGIEVNNHQHPKESNNNDNCTLLTECLISGFFNNIVKLSPMGDCYQKLTNG 811 Query: 644 YTGARNARFSIFPGSGLFK-KP-PKWVMVAELVETSRLWGRIAARIDPEWVE 693 G N I P S L+K KP PK+++ ELV TS+ + R +D + ++ Sbjct: 812 KNGNNNTPCYIHPSSCLYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIK 863 >UniRef50_Q9H6R0 Putative ATP-dependent RNA helicase DHX33 n=37 Tax=Eumetazoa RepID=DHX33_HUMAN Length = 707 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/644 (34%), Positives = 358/644 (55%), Gaps = 33/644 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LP+ Q + +L +R+ ++ GETGSGKTTQ+P+ E G +G+I TQPRR+AA Sbjct: 73 SLPILQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 132 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A R+++E +TE G +GY VRF D S++T +K +TDG+LL E D LL +Y +I Sbjct: 133 ISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTGIKFLTDGMLLREAISDSLLRKYSCVI 192 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPD-----LKIIITSATIDPERFSRHFNNAPIIEVS 250 +DEAHER+++ D L G +K RR + LK+I+ SAT+D + FS++FN AP++ + Sbjct: 193 LDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLE 252 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE--SHGDILIFMSGEREI----- 303 GR +P++V Y + D L A +V ++ QE S DIL+F++G+ EI Sbjct: 253 GRQHPIQVFY------TKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSK 306 Query: 304 --RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPG 359 RD A L +LPLYA L ++Q RVFQ R+++++TN+AETS+T+ G Sbjct: 307 TCRDIAKHLPD-GCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITG 365 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 IKYV+D G + +Y+ + ++ L ++ +S+ A QR GR GR GIC RLY+ED+F Sbjct: 366 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK 425 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT-TD 478 + T PEI R NLASV+LQ+ A+ + ++ F F+ P +IQ + L+ LGA+ D Sbjct: 426 FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKD 485 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 +Q + LTP+GR+++ P++P+ A+ +L + K C E + I S LS+ P ++ Sbjct: 486 DQLT---LTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRR 542 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 + ++F E D + +N++ K L N + C+ +++N + ++ Sbjct: 543 EEVQGVRKKFISSEGDHMTLLNIYRTF----KNLGGN--KDWCKENFVNSKNMTLVAEVR 596 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QLR + ++ +P+ S + + L L D T + +I P S Sbjct: 597 AQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSS 656 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 LF P V+ EL+ T++ + R ID +W+ A +R Sbjct: 657 VLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRR 700 >UniRef50_Q6P404 DEAH (Asp-Glu-Ala-His) box polypeptide 38 n=9 Tax=Eukaryota RepID=Q6P404_DANRE Length = 1258 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 234/657 (35%), Positives = 370/657 (56%), Gaps = 31/657 (4%) Query: 47 FQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGK 106 F + KE +A+ ++ + Y LP+ +Q +L IRD+ +VIV GETGSGK Sbjct: 536 FADHMKEKSEASSDFAKKKTLLEQRQY---LPIFAVRQQLLNIIRDNNIVIVVGETGSGK 592 Query: 107 TTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD 166 TTQL + E G G++G TQPRR+AA +VA R++EE+ + G +GY +RF D S+ Sbjct: 593 TTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSE 652 Query: 167 NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII 226 TM+K MTDGILL E ++ L Y +I+DEAHERSLN D L G L+E++ RR DLK+I Sbjct: 653 KTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLI 712 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 +TSAT+D ++F+ F N PI + GRT+PV++ + +E D E QA+ + + Sbjct: 713 VTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQE-DYVEAAVKQALQIHLSGMV 771 Query: 287 QESHGDILIFMSGEREIRDTADAL-----NKLNLRHTEILPLYARLSNSEQNRVFQSHSG 341 GDILIFM G+ +I T+D + + N +LP+Y++L + Q ++FQ Sbjct: 772 ----GDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAKIFQKAPD 827 Query: 342 --RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 R+ ++ATN+AETSLTV GI +V+D G ++ ++ R + L + PISQA+ANQR GR Sbjct: 828 GVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGR 887 Query: 400 CGRVSEGICIRLYSEDDFLSRP-EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 GR G C RLY++ F + T PEI RTNLA+V+L + +LG+ D+ F F++ P Sbjct: 888 AGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPP 947 Query: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518 + N+ + + L LGA+ + LTP GR + + P+DP L++M++ + C + Sbjct: 948 EDNMLNSMYQLWILGALD-----NTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADI 1002 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 +II S LS+ RP +++ SD+ +F ESD L ++N+ YL + SS Sbjct: 1003 LIIVSMLSVPSIFYRPKGREEESDQVREKFSVPESDHLTYLNV--YLQWKNNNYSSI--- 1057 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD 638 C +++ +R+ +++ QL+ ++ + + + S +++ I + H K Sbjct: 1058 -WCNDHFIHTKAMRKVREVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYF-HQAAKL 1115 Query: 639 ADKQEYTGARNAR-FSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWV 692 EY R + P S LF P +++ ELV T++ + + +D EW+ Sbjct: 1116 KGIGEYVNVRTGMPCHLHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWL 1172 >UniRef50_A3FQE8 Putative uncharacterized protein n=2 Tax=Cryptosporidium RepID=A3FQE8_CRYPV Length = 867 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 239/670 (35%), Positives = 362/670 (54%), Gaps = 58/670 (8%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LPV + K+ I++++ +H ++IV GETGSGKTTQ+P+ E G G+I TQPRR+A Sbjct: 198 NSLPVVKFKEQIIKSLEEHPILIVVGETGSGKTTQIPQYLFEAGYYKNGIIACTQPRRVA 257 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A+E+ + GG +GY +RF D S+ T+VK MTDGILL E + L Y I Sbjct: 258 AMSVAARVAKEMGSRLGGLVGYSIRFEDCTSEETVVKYMTDGILLREFLSEPDLKNYSCI 317 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPD------------------------LKIIITSA 230 +IDEAHERSL+ D L G +K++ R K+II+SA Sbjct: 318 LIDEAHERSLHTDILFGLVKDVSRFRNSDIYLENDIGKNGKIEGCANYNKNPFKLIISSA 377 Query: 231 TIDPERFSRHFNNAPIIEVSGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQE 288 T++ +FS +F+NAPII + GR +PV + Y P D T LQ F + ++ Sbjct: 378 TLEANKFSEYFDNAPIIYIPGRRFPVNIYYTKSPEANFIDGTVVTVLQIHFSQIKRSNEN 437 Query: 289 SH--------GDILIFMSGEREIRDTADAL-----NK-LNLRHTEILPLYARLSNSEQNR 334 GDIL F+ G++EI + L NK NL ILP+Y+ L + +Q + Sbjct: 438 MSSKKIIPVGGDILCFLPGQQEIEEAQALLESRLVNKDPNLPELIILPIYSSLPSEQQAK 497 Query: 335 VFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 +FQ+ + R++VLATN+AET+LTV I +V+D G + + Y+ +T ++ L P SQA+ Sbjct: 498 IFQTTPYGFRKVVLATNIAETALTVDNIGFVVDCGFCKQNSYNPKTGLESLITVPCSQAA 557 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD-PEILRTNLASVILQMTALGLGDIAAF 451 ANQR GR GRV G C RLY++ F + E ++ PEI R NL + +L + +LG+ D+ F Sbjct: 558 ANQRSGRAGRVRPGKCFRLYTKLSFTTEMEVSNVPEIQRCNLGNAVLVIKSLGIDDLLHF 617 Query: 452 PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK 511 F++ P + + LL LGA+ D++ +LT +GR +++LP+DP +MVL +QK Sbjct: 618 DFMDPPPPETLIRALELLYSLGAL--DDKG---ELTKVGRTMAELPIDPMHGKMVLASQK 672 Query: 512 HGCVREAMIITSALSIQDP-RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQK 570 + V EA I S LS+ + RP +K + +D + F D L +N++N Sbjct: 673 YSVVNEATTIVSMLSVGNSIFIRPKEKAKQADSIRKAFTVHGGDLLTLLNVYN------- 725 Query: 571 ALSSNAFRRL-CRTDYLNYLRVREWQDIYTQLRQVVKE-LGIPVNSEPAEYREIHIALLT 628 SN F C ++L +++ +DI TQ+ ++ E L I ++S P E I A+ Sbjct: 726 QWQSNDFSGYWCYDNFLQVKSLKKARDIKTQIDSLLSEKLDIQISSNPNELEYIRKAITA 785 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688 G + T I P S LF P + ELV T++ + R I Sbjct: 786 GFFLQSARINKGGNYTTIKWRHIVDIHPSSTLFNLKPSAITYTELVLTTKEYMRNLTEIK 845 Query: 689 PEWVEPVAQH 698 +W+ VA H Sbjct: 846 TDWLLEVAPH 855 >UniRef50_Q5ANN5 Likely spliceosomal DEAD box ATPase n=3 Tax=Eukaryota RepID=Q5ANN5_CANAL Length = 865 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 237/654 (36%), Positives = 378/654 (57%), Gaps = 55/654 (8%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134 +LPV +++ L+ I ++Q +IV GETGSGKTTQLP+ E G +I TQPRR+A Sbjct: 228 SLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRRVA 287 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDT 193 A +VANR+A E++ + G +GY +RF D+ D T++K +TDG+LL E QD L +Y Sbjct: 288 ATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKYSA 347 Query: 194 IIIDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 I+IDEAHER+L+ + LL LK+++ R+ DLKIII SATI+ E+FS+ FNNAPI+ + G Sbjct: 348 IMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNIPG 407 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDE--LSQESHGDILIFMSGEREIRDTADA 309 R +PV++ Y E + +QA + + ++Q GDIL+F++G+ EI + Sbjct: 408 RRFPVKIHY------TKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETMEEI 461 Query: 310 LNKLNLRHTE------ILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIK 361 L L+ + + +YA L Q ++FQ + R+IVLATN+AETS+T+ GI Sbjct: 462 LRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDGIS 521 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVIDPG + + Y+ T ++ L + P S+ASA+QR GR GRV G C RL+++ F + Sbjct: 522 YVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNEL 581 Query: 422 EFT-DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 + PEI R NL SVIL + +LG+ D+ F F++ P K I + LL LGA+ T Sbjct: 582 DSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALNTQG- 640 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS-IQDPRERPMDKQQ 539 KLT G+++S+ P+DP + +L + K ++ + I + L+ + RP DK++ Sbjct: 641 ----KLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKE 696 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +D++ + F+D + D + +W Q+ + S + C+ ++ Y ++ ++IY Sbjct: 697 LADKRKQEFNDLQGDQFMLLKIW------QQWVDSGYSVQWCQDYFIQYKTMKRIKNIYE 750 Query: 600 QLRQVVKELGIPVNSEPAEYRE-----------IHIALLTGLLSHI----GMKDADKQEY 644 QL ++ K++GI VNS ++R+ + L++G ++I M D Q+ Sbjct: 751 QLIRLSKKIGIEVNSR-HQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDC-YQKL 808 Query: 645 T---GARNARFSIFPGSGLFK-KP-PKWVMVAELVETSRLWGRIAARIDPEWVE 693 T G N I P S ++K KP PK+++ ELV TS+ + R +D + ++ Sbjct: 809 TNGKGGNNTPCYIHPSSCIYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIK 862 >UniRef50_B2S3B9 ATP-dependent helicase n=3 Tax=Treponema RepID=B2S3B9_TREPS Length = 668 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 233/639 (36%), Positives = 356/639 (55%), Gaps = 27/639 (4%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LPV +K IL A+ H V++V TGSGKTTQLP I E G G IG TQPRR+A Sbjct: 6 QLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIAV 65 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +V+ IA+++ G +GYK+RF DH T +K+MTDGILL E++ D LL +Y I+ Sbjct: 66 LSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSIIM 125 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHERSLNIDF+LG LK +L +R D +I+I+SATI+ FSR+FN P+I++ YP Sbjct: 126 VDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAYP 185 Query: 256 VEVRYRPI-------VEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTAD 308 V V + P +EA+ +++ I + V ++ G ILIF+ GER I++ Sbjct: 186 VTVIFDPPDTPASTHTKEAEAALLEKIVCIVERV--IASRDKGAILIFLPGERSIKNCIT 243 Query: 309 ALNKLN-LRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVID 365 L+ R +LPLY RLS EQ +VF R++V+ATN+AETS+T+ + VID Sbjct: 244 RLSHERWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVID 303 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G +++ Y+ + L PISQAS NQR+GR GRV G C RLYS DDF R +T Sbjct: 304 SGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTL 363 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 EI RT+L+ V+++M LG+ D F F+ P I L LGA+ D Sbjct: 364 EEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDRS----- 418 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKH--GCVREAMIITSALSIQDPRERPMDKQQASDE 543 L+ +G+ + P+ PR +RM++EA + + + +I + LS + P D+++ + + Sbjct: 419 LSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKK 478 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H F D DF++F+ ++ ++ N C+ YL+ + E +I QL Sbjct: 479 AHGTFSDPMGDFVSFLRIYRAYAQE------NNKHSFCQHFYLDERIMAEISNIKEQLEL 532 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 +V +G P+ + E I + TG++ + +++ + Y I PGS ++K Sbjct: 533 IVSGMGFPLLTG-GTVEEYLICVGTGMIQFVCVQE-HRDSYRSLTAECIHIHPGSCVYKD 590 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 PK+++ E+V TSR++ + + + E +A L++R Sbjct: 591 RPKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAPALLER 629 >UniRef50_Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=55 Tax=Fungi/Metazoa group RepID=PRP16_HUMAN Length = 1227 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 242/684 (35%), Positives = 381/684 (55%), Gaps = 42/684 (6%) Query: 31 LHGVKKVKNPDA-----------QQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV 79 + GVKK + PD + F + K +A+ + +++ + Y LP+ Sbjct: 478 IMGVKKEEEPDKAVTEDGKVDYRTEQKFADHMKRKSEASSEFAKKKSILEQRQY---LPI 534 Query: 80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA 139 +Q++L IRD+ +VIV GETGSGKTTQL + E G G+IG TQPRR+AA +VA Sbjct: 535 FAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVA 594 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 R++EE+ G +GY +RF D S+NT++K MTDGILL E ++ L Y II+DEA Sbjct: 595 KRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEA 654 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR 259 HERSLN D L G L+E++ RR DLK+I+TSAT+D E+F+ F N PI + GRT+PV++ Sbjct: 655 HERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDIL 714 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA----LNKL-N 314 + +E D E A+ ++ + GDILIFM G+ +I T+D L +L N Sbjct: 715 FSKTPQE-DYVE----AAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELEN 769 Query: 315 LRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 +LP+Y++L + Q ++FQ R+ ++ATN+AETSLTV GI +VID G ++ Sbjct: 770 APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 829 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFTDPEILRT 431 ++ R + L I PISQA+ANQR GR GR G C RLY++ + + T PEI RT Sbjct: 830 VFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRT 889 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491 NLA+V+L + +LG+ D+ F F++ P + N+ + + L LGA+ + LT GR Sbjct: 890 NLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALD-----NTGGLTSTGR 944 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 + + P+DP L++M++ + GC E ++I S LS+ RP +++ SD+ +F Sbjct: 945 LMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVP 1004 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 ESD L ++N+ YL + S+ C +++ +R+ +++ QL+ ++ + + Sbjct: 1005 ESDHLTYLNV--YLQWKNNNYSTI----WCNDHFIHAKAMRKVREVRAQLKDIMVQQRMS 1058 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGSGLFKK--PPKWV 668 + S ++ + + H K EY R + P S LF P ++ Sbjct: 1059 LASCGTDWDIVRKCICAAYF-HQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYI 1117 Query: 669 MVAELVETSRLWGRIAARIDPEWV 692 + ELV T++ + + +D EW+ Sbjct: 1118 VYHELVMTTKEYMQCVTAVDGEWL 1141 >UniRef50_Q6FTI2 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida glabrata RepID=Q6FTI2_CANGA Length = 1057 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 230/642 (35%), Positives = 361/642 (56%), Gaps = 43/642 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134 +LP+ + + ++L+ IRD+QV I+ GETGSGKTTQL + E G G LI TQPRR+A Sbjct: 340 SLPIYKARANVLQMIRDNQVSILIGETGSGKTTQLAQYLYEDGYTRDGGLIACTQPRRVA 399 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A+E+ + G +GY +RF D +T +K MTDGILL E D L +Y I Sbjct: 400 AMSVAKRVAQEMDKKVGDLVGYSIRFEDKTGPSTKIKFMTDGILLRETLIDENLEKYKVI 459 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 IIDEAHERSLN D LLG LK L+ RR D+KIIITSAT+D +FS+ F P +V G+TY Sbjct: 460 IIDEAHERSLNTDVLLGLLKNLVKRRRDIKIIITSATLDANKFSQFFGGLPQYKVPGKTY 519 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES---HGDILIFMSGEREIRDTAD--- 308 PV+V + T D ++A + + GDILIFM+G+ +I + Sbjct: 520 PVQVMH------TSGTVPDYVEAAVSQAVRIHLTTAIQSGDILIFMTGQEDILCCIELIK 573 Query: 309 -----------ALNKLN-LRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETS 354 +N + + E+ P+Y+ L QNR+F R+IV++TN+AETS Sbjct: 574 ERIVDLYGKKYGINTFDKVDDVELFPIYSALPAEIQNRIFLDLDIGKRKIVVSTNIAETS 633 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LT+ GI+YVID G +++ Y+ + + L I PIS A+ANQR GR GR + GI RLYSE Sbjct: 634 LTISGIRYVIDCGYSKLKVYNPKIGLDSLAIAPISIANANQRSGRAGRTAPGIAYRLYSE 693 Query: 415 DDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 + L+ + T PEI RTNL++++L + +LG+ ++ FPF++ P + + L LG Sbjct: 694 ETELTDMYQQTIPEIKRTNLSNIVLTLKSLGIKNVVDFPFLDPPSIETLMASMYELWFLG 753 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 + D + L LG+++ P+ P L+++++++ GC +E + I + LS+ ER Sbjct: 754 VLNDDGE-----LNALGKKMVNFPLQPTLSKVLIQSISFGCSKEVVTIVAMLSVPQVFER 808 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P ++Q+ +DE +RF ESD L +N++ +Q K S+ + C+ +++ Y + Sbjct: 809 PKERQKEADEARKRFFISESDHLTLMNVY----DQWK--SAKYSPKWCKKNFVLYKSLIR 862 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA-RF 652 ++I TQ+ ++K+ + S ++ I + +G K + +Y R Sbjct: 863 AREIRTQIVSLLKQQKHKLKSAGSDLSIIRKCICSGFAQQ-AAKASGLTKYVHLRTGMEL 921 Query: 653 SIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 + P S L+ P P +V+ E++ T + + +DP W+ Sbjct: 922 RVHPTSSLYGLPNLPPYVIYHEMLLTEQEYICCVTSVDPLWL 963 >UniRef50_O45244 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 n=4 Tax=Chromadorea RepID=DHX16_CAEEL Length = 1008 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 227/641 (35%), Positives = 362/641 (56%), Gaps = 35/641 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLA 134 +LPV + +EA+++HQV+I+ GETGSGKTTQLP+ E G G IG TQPRR+A Sbjct: 363 SLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVA 422 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A+E+ + G +GY +RF D S+ T++K MTDG+LL E + L Y + Sbjct: 423 AMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 +IDEAHER+L+ D L G +K++ R DLK++I+SAT+D E+FS F++API + GR + Sbjct: 483 MIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRF 542 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDE--LSQESHGDILIFMSGEREIRDTADAL-- 310 PV++ Y E D + A + + L+Q GDIL+F++G+ EI +AL Sbjct: 543 PVDIYY------TQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALME 596 Query: 311 --NKLNLRHTEILPL--YARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVI 364 L + E++PL YA L + Q ++F+ R++VLATN+AETS+T+ GI YVI Sbjct: 597 RSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVI 656 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 DPG ++ + + R+ V+ L + IS+A+ANQR GR GR G C RLY+ + + E Sbjct: 657 DPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTA--WAYKHELE 714 Query: 425 D---PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 + PEI RTNL +V+L + +LG+ D+ F F++ P + + + L LGA+ + Sbjct: 715 EQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGE- 773 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR-ERPMDKQQA 540 LT LGR++++ P DP +++M++ ++K+ C E + I + LS RP + Sbjct: 774 ----LTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIH 829 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +D + F D + +N++N E S+ +R C +Y+ + ++ +D+ Q Sbjct: 830 ADSARKGFWSPAGDHITLMNVYNKWQE------SSFSQRWCVENYVQHRTMKRARDVRDQ 883 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L +++ + I S + +I A+ G ++ D T P S L Sbjct: 884 LVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCL 942 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 F++ P+WV+ ELV TS+ + R + I+ W+ VA H K Sbjct: 943 FEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983 >UniRef50_Q4Q2X4 ATP-dependent RNA helicase-like protein n=3 Tax=Leishmania RepID=Q4Q2X4_LEIMA Length = 805 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 238/680 (35%), Positives = 356/680 (52%), Gaps = 81/680 (11%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LPV +K+ I E +R + V ++ GETGSGKTTQ+P EL G+I TQPRR+AA Sbjct: 101 LPVFEKRHLIQETVRTNAVTLLVGETGSGKTTQVPHFLAELQDAFTGVIACTQPRRIAAI 160 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+AEE+ G +GY VRF D T V MTDG+LL E D L +Y +++ Sbjct: 161 SVATRVAEEMDVPLGAHVGYHVRFDSRQCDATRVLYMTDGMLLREAFTDSDLQKYSVVVV 220 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+++ D +LG LK LL RRP ++++ SAT+D + +F AP++ VSGR + V Sbjct: 221 DEAHERTIDTDVVLGLLKRLLTRRPLFRLVVMSATLDVAKIQSYFPGAPLVHVSGRMHDV 280 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNK--- 312 +V Y P RD ++A V +L + E GDIL F++GE EI AL++ Sbjct: 281 DVLYMP------HPVRDYVEATVSCVLQLHEREPAGDILCFLTGEAEIERAVAALHQALG 334 Query: 313 -----------------------LNL------RHTEIL--PLYARLSNSEQNRVFQSH-- 339 LN R TE++ PLY LS EQ +VF ++ Sbjct: 335 SSSAAASKEQNAPTQGPGKGLTVLNTPADDLARPTEVVVVPLYGSLSLQEQQKVFATYPP 394 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 + R++V+ATN+AETS+T+ GI YV+D G + S Y+ +V L IS+ASA QR GR Sbjct: 395 NTRKVVVATNIAETSVTIDGIVYVVDCGYQKQSLYNSEARVDYLLPAVISKASAEQRTGR 454 Query: 400 CGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459 GR G C RL++ DF + P+ T PEILRTN+ + +L + LG+ + FPF++ P Sbjct: 455 AGRTRPGKCFRLFTSADFATFPDQTHPEILRTNIVNTVLLLLTLGVANPCEFPFIDPPSD 514 Query: 460 RNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAM 519 + + D L GA+ Q LT GR+++ LPVD LARM+L A KHGC +A Sbjct: 515 QGMSDAFYQLLYFGAVDDGLQ-----LTDFGRRMAVLPVDVCLARMLLMAPKHGCGADAA 569 Query: 520 IITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFR 578 ++ + L + RP + + E H RF + + D +A +++ Y QQ + Sbjct: 570 VVAAMLEAGNAFSRPPSRLAEAREAHARFDNADGDHVALFRVFHAYFKNQQNG------K 623 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE----------------I 622 R C +YL + +++ +Y QLR+++ +L IPV S RE Sbjct: 624 RFCYENYLRHQTLQQAVQVYKQLRRLMSQLMIPVQSTYIPEREYVDTVALRKAVLEGFFT 683 Query: 623 HIALLTGL--LSHIGMKDADKQEYTGARNA------RFSIFPGSGLFKKPPKWVMV--AE 672 +A LT + ++H D + Y R+A R S+ + + P W++ E Sbjct: 684 QVAFLTPVAPITHRAGADPTTRVYRTVRDALSATLHRQSVLAAAHKLRALPTWIVFDRLE 743 Query: 673 LVETSRLWGRIAARIDPEWV 692 + S + R A+ ++ W+ Sbjct: 744 VQGDSGTFIRTASAVEVGWL 763 >UniRef50_A9US44 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9US44_MONBE Length = 1322 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 231/648 (35%), Positives = 356/648 (54%), Gaps = 50/648 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ +Q++L IRD+QV+I+ G+TGSGKTTQ+ + E G G G IG TQPRR+AA Sbjct: 610 LPIYAVRQELLNIIRDNQVIIIVGQTGSGKTTQMTQYLYEAGYGDFGTIGCTQPRRVAAM 669 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE+ E G +GY +RF D S T++K MTDGILL E + L QY II+ Sbjct: 670 SVAKRVSEEMGVELGKQVGYSIRFEDVTSRETVIKYMTDGILLRESLNEGDLDQYSAIIM 729 Query: 197 DEAHERSLNIDFLLGYLKELLP---------------------RRPDLKIIITSATIDPE 235 DEAHERSLN D L G L++++ RR DLK+I+TSAT+D Sbjct: 730 DEAHERSLNTDVLFGLLRDVVARCGTAAPRCVRPSHSRVPRCIRRRDLKLIVTSATMDST 789 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDIL 294 +F+ F N P+ + GRT+PVEV + A + D ++A ++ + H GD+L Sbjct: 790 KFATFFGNVPVFNIPGRTFPVEVFF------AKNPVDDYVEAAIKQAVQIHLQPHPGDML 843 Query: 295 IFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 IFM+G+ +I T L + ++ ILP+Y++L + Q ++F+ R+ ++AT Sbjct: 844 IFMTGQADIEATCSVLAERLEALGEDVPPLSILPIYSQLPSDLQAKIFKKSDVRKCIVAT 903 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLTV GI +VID G ++ Y+ + + L I PISQA+ANQR GR GR G Sbjct: 904 NIAETSLTVDGIMHVIDSGFCKLKCYNPKIGIDDLQIYPISQANANQRSGRAGRTGPGNA 963 Query: 409 IRLYSEDDFLSR-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 RLY+E + + T PEI RTNLA+V+L + +LG+ ++ F F++ P + I + + Sbjct: 964 YRLYTEAIYKNELLPLTVPEIQRTNLANVVLLLKSLGVENLMDFHFMDPPPQETILNSMY 1023 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L LGA+ + LTPLGRQ+ + P+DP ++M++ + C E + I S LS+ Sbjct: 1024 NLWILGALD-----NTGALTPLGRQMVEFPLDPAQSKMLIVSADLECSSEILTIVSMLSV 1078 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 RP +++ SD K +F ESD L +N + Q+ S+N +++ Sbjct: 1079 DKHFFRPPGREEESDLKREKFAVPESDHLTLLNTY------QQWKSNNYSSSWASEHFIH 1132 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGA 647 +R+ ++I QL ++K +PV S + + + + H + EY A Sbjct: 1133 AKSMRKVREIRMQLMDIMKSQKVPVISSGTSWDAVRKCICSAYFHH-AARLKGIGEYVNA 1191 Query: 648 RNARFS-IFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 R + + P S L+ P WV +LV T++ + + +DP W+ Sbjct: 1192 RTGMPAHLHPTSSLYGMGINPDWVCYHDLVMTTKEYMQFVTAVDPLWL 1239 >UniRef50_D2JWV9 Putative pre-mRNA splicing factor n=1 Tax=Filobasidiella depauperata RepID=D2JWV9_9TREE Length = 1087 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 230/641 (35%), Positives = 357/641 (55%), Gaps = 62/641 (9%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LP+ + + ++ AIRD+Q+++V G+TGSGKTTQ+ + E G +G +G TQPR++AA Sbjct: 448 SLPIYKLRDQLVAAIRDNQILVVVGDTGSGKTTQMAQYLAEEGFLERGRLGCTQPRKVAA 507 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VA R+AEE+ G +GY +RF D S T +K MTDG+LL E+ D +Y ++ Sbjct: 508 VSVAKRVAEEVGCRLGAEVGYTIRFEDMTSLETKIKYMTDGMLLRELLVDPDCSKYSVLM 567 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHER++ D L G LK+ RRPDLK+I TSAT+D +F+ +F PI + GR +P Sbjct: 568 LDEAHERTIATDVLFGLLKKACKRRPDLKLICTSATLDAAKFATYFWGCPIFTIPGRAFP 627 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTA-----DA 309 VE Y + E D L+A + ++ E GDIL+F++G+ EI DTA + Sbjct: 628 VETLY------TKEPEPDYLEASLITILQIHLMEPPGDILLFLTGQEEI-DTACEILYER 680 Query: 310 LNKLNLRHTE--ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVID 365 + L + E ILP+YA L + Q+R+F+ + R++V+ATN+AETS+T+ GI YVID Sbjct: 681 VKALGPQVPELLILPVYAALPSEMQSRIFEPAAPGARKVVIATNIAETSITIDGIYYVID 740 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE----DDFLSRP 421 PG A+ + Y + + L + PISQA A QR GR GR G C RLY+E ++ L P Sbjct: 741 PGFAKQNAYDPKLGMDSLIVTPISQAQARQRAGRAGRTGPGKCYRLYTEIAYRNEMLPNP 800 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PEI RTNLAS IL + A+G+ D+ +F F++ P + + L LGA+ D++ Sbjct: 801 ---IPEIQRTNLASTILTLKAMGINDLISFDFMDPPPAATMLTALEQLYALGAL--DDEG 855 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR-ERPMDKQQA 540 LT +GR+++ P+DP L++M++++ +GC EA+ I + L RP DKQ Sbjct: 856 ---LLTRIGRKMADFPLDPPLSKMLIKSVDYGCSEEALTIVAMLQAGGQVFYRPKDKQAQ 912 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +D K +FH E D L + ++N G + S+ C +++ ++ QD+ Sbjct: 913 ADAKKAKFHQAEGDLLTLLTVYN--GWKNSKFSNP----WCFENFIQTRAMKTAQDV--- 963 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 R++ L ++ E + L+ G SI P S L Sbjct: 964 -RKLA--LTQSSPPSVSDPSEGYKTLVEG--------------------TPVSIHPSSAL 1000 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 F++PP+W + ELV T++ + I+P+W+ VA + Sbjct: 1001 FQRPPEWCVYYELVLTAKEYMHQVTAIEPKWLSDVAPTFFR 1041 >UniRef50_Q7XIR8 Os07g0508000 protein n=4 Tax=Embryophyta RepID=Q7XIR8_ORYSJ Length = 1280 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 235/636 (36%), Positives = 363/636 (57%), Gaps = 41/636 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + D+L+ +R++QVV+V GETGSGKTTQL + E G G++G TQPRR+AA Sbjct: 583 LPIFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAM 642 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE++TE G +GY +RF D S NT++K MTDG+LL E +D L +Y I++ Sbjct: 643 SVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVM 702 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLN D L G LK+++ RR D K+I+TSAT++ ++FS+ F P+ + GRT+PV Sbjct: 703 DEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPV 762 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL------ 310 + + E D E QA+ + GDILIFM+G+ EI T AL Sbjct: 763 NIMFSKTPCE-DYVEAAVKQAMTIHI----TSGPGDILIFMTGQEEIEATCYALAERLEQ 817 Query: 311 ----NKLNLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVI 364 + + ILP+Y++L Q ++FQ R+ ++ATN+AETSLTV GI YVI Sbjct: 818 LISSSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVI 877 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE----DDFLSR 420 D G ++ Y+ R + L + P+S+A+A+QR GR GR G C RL++E ++ L Sbjct: 878 DTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLFTESAYQNEMLPN 937 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P PEI RTNL +V+L + +L + ++ F F++ P + NI + + L LGA+ Sbjct: 938 PV---PEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQENILNSMYQLWVLGALN---- 990 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 + LT +G ++ + P+DP LA+M+L ++ C+ E + I S LS+ RP D+ + Sbjct: 991 -NVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEE 1049 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR-RLCRTDYLNYLRVREWQDIYT 599 SD +F ESD L +N+ YL SN +R C +L+ +R+ +++ + Sbjct: 1050 SDAAREKFFVPESDHLTLLNV--YL-----QWKSNQYRGDWCNDHFLHVKGLRKAREVRS 1102 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGS 658 QL ++K L IP+ S E+ + A+ + H + EY RN + P S Sbjct: 1103 QLLDILKTLKIPLTSCHMEWDVVRKAICSAYF-HNAARLKGVGEYVNCRNGMPCHLHPSS 1161 Query: 659 GLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 L+ P +V+ ELV T++ + + +DP+W+ Sbjct: 1162 ALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWL 1197 >UniRef50_B6AI28 Pre-mRNA-processing protein 8, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AI28_9CRYT Length = 878 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 235/683 (34%), Positives = 373/683 (54%), Gaps = 75/683 (10%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LPV + +++IL ++ + ++IV GETGSGKTTQ+P+ E G KG I TQPRR+AA Sbjct: 198 SLPVIKYREEILSSLEKYPILIVVGETGSGKTTQIPQYLYEAGYAEKGTIACTQPRRVAA 257 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VANR+++E+ G +GY +RF D +++T +K MTDGILL E + L Y ++ Sbjct: 258 MSVANRVSKEMNCRLGSKVGYTIRFEDCTNEDTKIKYMTDGILLREFLSNPDLSGYSCLL 317 Query: 196 IDEAHERSLNIDFLLGYLKEL----------LPRRPD-------LKIIITSATIDPERFS 238 IDEAHERSL+ D L G +K++ L + D K+II+SAT++ E+F Sbjct: 318 IDEAHERSLHTDVLFGLVKDVSKFRNFKDDNLSTKSDCEDSTEPFKLIISSATLEAEKFG 377 Query: 239 RHFNNAPIIEVSGRTYPVEVRYR--PIVEEADDT-------------ERDQLQAIFD--- 280 ++F+N+PII + GR YPV++ Y P D T + ++ + I D Sbjct: 378 KYFDNSPIIYIPGRRYPVDIYYTKAPEANFIDATVVTVLQIHLSQLKKSNKTEGIIDNNS 437 Query: 281 ---AVDELSQE--------SHGDILIFMSGEREIRDTADALNKLNLRHTE------ILPL 323 ++D + + GDIL F+ G++EI + + LNK L + +LP+ Sbjct: 438 TIKSLDNIGMNFSRTRIIPTGGDILCFLPGQQEIEECMEMLNKKMLGKGKEVPELIVLPI 497 Query: 324 YARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 YA L + +Q ++F S R++VLATN+AET+LT+ I +VID G + + Y+ +T + Sbjct: 498 YASLPSEQQAQIFISTPQGARKVVLATNIAETALTIDNIGFVIDCGFCKQNSYNPKTGLD 557 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD-PEILRTNLASVILQM 440 L P S+A+ANQR GR GRV G C RLY++ F E ++ PEI R NL +V+L + Sbjct: 558 SLVTIPCSRAAANQRAGRAGRVRPGKCFRLYTKTSFYMEMEPSNTPEIQRCNLGNVVLML 617 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 +LG+ D+ F F++ P + + LL L A+ D++ LT +GR++++LP+DP Sbjct: 618 KSLGIDDLLHFDFMDPPPPETLVKALELLYGLNAL--DDKGD---LTNIGRKMAELPLDP 672 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRE-RPMDKQQASDEKHRRFHDKESDFLAFV 559 +++VL +Q++ V E++II S LS+ + RP DK +D + F D L + Sbjct: 673 MYSKVVLASQRYKVVDESIIIVSMLSLGNTVFIRPRDKSTQADNIRKSFFRSGGDHLTLL 732 Query: 560 NL---WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 616 N+ W GE SN + C ++++ ++ +DI QL ++++ L I + S P Sbjct: 733 NVYKQWENSGE------SNLW---CFENFIHGKSMKRARDIRIQLSELMETLDIEITSNP 783 Query: 617 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF-SIFPGSGLFKKPPKWVMVAELVE 675 E I ++ G + Y+ RN I P S LF+ P+ V+ ELV Sbjct: 784 NEVDGIRKSIAAGFFFQTARINKGGN-YSTLRNCHIVDIHPSSSLFESRPQTVVYTELVH 842 Query: 676 TSRLWGRIAARIDPEWVEPVAQH 698 T++ + R I EW+ VA H Sbjct: 843 TTKEYMRNITEIKAEWLFEVAPH 865 >UniRef50_A8IHD9 DEAH-box nuclear pre-mRNA splicing factor n=2 Tax=Viridiplantae RepID=A8IHD9_CHLRE Length = 689 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 235/640 (36%), Positives = 356/640 (55%), Gaps = 39/640 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM--ELGR--GIKG-LIGHTQP 130 LP + +L ++ H+ +++ GETGSGKTTQ+P+ + + G+ G KG I TQP Sbjct: 40 QLPAWAARDKLLALLQQHRTLVLVGETGSGKTTQIPQFLLAAKFGKSSGSKGACIAVTQP 99 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA TVA R+AEE+ T+ G +GY +RF D S T +K MTDG+LL E D LL + Sbjct: 100 RRVAAMTVARRVAEEMGTKIGQQVGYAIRFEDVTSPATRIKYMTDGLLLREALVDPLLSR 159 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEV 249 Y ++IDEAHER+++ D LLG +K + RR D ++++ SAT+D RF +F A V Sbjct: 160 YRVVVIDEAHERTVHTDVLLGLIKGVQARRGDDFRLVVMSATLDAARFVDYFPGAVAALV 219 Query: 250 SGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDT 306 GR +PV+V Y RP E + L A +A ++ +E GD+L+F++G+ EI D+ Sbjct: 220 RGRQFPVQVLYTARP--------EDNYLDAAINATLQVHGEEPEGDVLVFLTGQDEI-DS 270 Query: 307 ADALNKLNL------RHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVP 358 A+ L K R +LP+YA L +Q +VF+ R+ +LATN+AETS+T+P Sbjct: 271 AERLLKAAAAVGGRPRELLVLPIYAALPPEQQMKVFEPAPPGTRKAILATNIAETSITIP 330 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 G++YVID G + Y+ + ++ L + P+SQA A QR GR GR G RLY+E DF Sbjct: 331 GVRYVIDTGHVKARDYNAKLGLESLAVVPVSQAQARQRSGRAGREGPGKAYRLYTEADFS 390 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 T PEI R NLASV+LQ+ A+G+ D+ F F++ P + I + LL LGA+ Sbjct: 391 QLAATTPPEITRCNLASVVLQLKAMGIDDVLGFDFMDPPPRTAILRSLELLFALGALD-- 448 Query: 479 EQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 ++ KLT +G +LS+LPVDP R++L A + GC EA+ + + +S + P K Sbjct: 449 ---NSGKLTEEVGLRLSRLPVDPMFGRVLLAAAELGCGVEALAVVAMVSADNVFHTPRQK 505 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 + +F +E D L +N++ E K S A C +++N +R+ +DI Sbjct: 506 EAEWRAARLKFLSREGDHLTLLNVFRGFMELPK--SHKARTGWCSDNFINIRALRKAEDI 563 Query: 598 YTQLRQVVKE-----LGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 YTQL + + LG+P+ + E + AL GL H D A + Sbjct: 564 YTQLVRFMGHPCPPGLGLPLATCGDETTPLRRALTAGLFPHAARLQPDGSYRVIATGRQV 623 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + P S L ++ P ++ EL+ T+R + R A I+ W+ Sbjct: 624 FLHPSSVLLERKPDCLVFNELMHTTRTYARDATAIEARWL 663 >UniRef50_Q9VR29 CG3225 n=19 Tax=Neoptera RepID=Q9VR29_DROME Length = 678 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 231/646 (35%), Positives = 356/646 (55%), Gaps = 33/646 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LP+ Q + IL + HQVVI+ GETGSGK+TQ+P+ E G KGLIG T+PRR++ Sbjct: 45 ERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVS 104 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 T+ANR+A+E G +GY VRF + +S T +K MT+GILL E+ D LL QY I Sbjct: 105 TVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVI 164 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS---- 250 I+DEAHER++ D +LG LK++L +R LK+II+SATID FS F+ EVS Sbjct: 165 IVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLS 224 Query: 251 --GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTA 307 GR +PV Y ++ D ++ + V +L Q E GDIL F++G+ E+ + Sbjct: 225 IEGRMHPVSNFY------LNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEAL 278 Query: 308 DALNKL----NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIK 361 D L + + ++LP+Y +S+++Q VF + R++VLATN+AETS+T+PGI Sbjct: 279 DLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIV 338 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVID G ++ Y+ +T L I P+S+ASA QR GR GR+ G RLY++ D+ + Sbjct: 339 YVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALA 398 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PE+ R+ L+ ILQ+ ALG+G+I F F P +N+ + L L AI DEQ Sbjct: 399 PRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAI--DEQG 456 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD--KQQ 539 + K P+G L++LP L++M+ + + GC E + I + L +Q RP QQ Sbjct: 457 NLTK--PVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQ 514 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 + HR+F E DF+ +N Y G ++ ++ + C +L Y ++ + Sbjct: 515 SGRIAHRKFEVAEGDFITMLN--AYTGFVEEGMT----KEFCGQYFLIYRNLKRAHSLRE 568 Query: 600 QLRQVV-KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QL V K+ GIP+ S + ++ + G + + + +I P S Sbjct: 569 QLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNS 628 Query: 659 GLFKKP-PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 L+ P ++V+ EL++T++L+ I EW+ +A H ++T Sbjct: 629 TLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQQT 674 >UniRef50_Q5KGT3 Pre-mRNA splicing factor, putative n=7 Tax=Dikarya RepID=Q5KGT3_CRYNE Length = 1261 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 225/631 (35%), Positives = 356/631 (56%), Gaps = 36/631 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP +++++ IRDHQV++V GETGSGKTTQL + E G G+IG TQPRR+AA Sbjct: 558 LPAFAVREELMGMIRDHQVLVVVGETGSGKTTQLGQFLYEDGYCANGMIGCTQPRRVAAM 617 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE++ G +GY +RF D S +T +K MTDG+LL E + L +Y II+ Sbjct: 618 SVAKRVSEEMECTLGETVGYAIRFEDCTSKDTKIKFMTDGVLLRESLNEGDLDRYSVIIL 677 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSL+ D L+G L+++L RR DLK+I+TSAT++ E+FS+ F NA + GRT+PV Sbjct: 678 DEAHERSLSTDILMGLLRKILTRRRDLKLIVTSATMNAEKFSQFFGNAATYTIPGRTFPV 737 Query: 257 EVRY--RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN 314 E+ + P + D + LQ + S GDIL+FM+G+ +I + + Sbjct: 738 EIFHSKSPCEDYVDSAIKQVLQIHLSS-------SQGDILVFMTGQEDIECCCQVIEE-R 789 Query: 315 LRHTE------ILPLYARLSNSEQNRVFQ-SHSGRR-IVLATNVAETSLTVPGIKYVIDP 366 L + +LP+Y+++ Q ++FQ + GRR +V+ATN+AETSLTV GI YV+D Sbjct: 790 LSQLDDPPPLAVLPIYSQMPADLQAKIFQPTPDGRRKVVVATNIAETSLTVDGILYVVDC 849 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD- 425 G +++ Y+ + + L I PISQA+ QR GR GR G C RLY+E +L+ ++ Sbjct: 850 GYSKLKVYNPKVGMDALQITPISQANCGQRAGRAGRTGPGFCYRLYTETAYLNELFASNI 909 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI RTNLA+ +L + +LG+ ++ F F++ P + NI + + L LGA+ + Sbjct: 910 PEIQRTNLANTVLLLKSLGVKNLLEFDFMDPPPQENILNSMYQLWVLGALD-----NVGN 964 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT +GR++S P++P LA+M++ + + C E + I S LS+ RP + + SD Sbjct: 965 LTSIGRKMSDFPMEPSLAKMLIVSVDYQCSSEMLTIVSMLSVPSVFYRPPQRAEESDAAR 1024 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR-RLCRTDYLNYLRVREWQDIYTQLRQV 604 +F ESD L ++++ SN + C +L+ +R+ +++ QL + Sbjct: 1025 EKFFVPESDHLTLLHVYT-------QWKSNGYSDSWCMKHFLHPKLMRKAREVRGQLEDI 1077 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF-PGSGLFKK 663 +K+ + + S ++ + + G H + EY R + P S L+ Sbjct: 1078 MKQQKMDLLSVGTDWDIVRKCITAGYF-HQAARVKGIGEYMNIRTGLPCVLHPTSALYGL 1136 Query: 664 P--PKWVMVAELVETSRLWGRIAARIDPEWV 692 P +V+ ELV TS+ + +DP W+ Sbjct: 1137 GYMPDYVVYHELVLTSKQYMMCVTSVDPYWL 1167 >UniRef50_C4Y9K0 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y9K0_CLAL4 Length = 1131 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 232/679 (34%), Positives = 369/679 (54%), Gaps = 36/679 (5%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYP-DNLPVSQKKQDILEAIRDHQVV 96 KN D +Q +E +K +QA + ++ ++ LPV ++ +L A+RD+Q V Sbjct: 426 KNKDKEQNKDKEQSKGKEQAPYSKSRKNVSKSDLAQSRKRLPVYAMREQLLSAVRDNQFV 485 Query: 97 IVAGETGSGKTTQLPKICME--LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 IV GETGSGKTTQ+ + E RG K +I TQPRR+AA +VA R+A+E+ G + Sbjct: 486 IVVGETGSGKTTQIVQYLYEENFHRGDK-IIACTQPRRVAAESVAKRVAQEVGCPLGQEV 544 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D S T +K MTDG+L E D + +Y +++DEAHER++ D L LK Sbjct: 545 GYTIRFDDRTSPATRIKYMTDGMLQREALLDPQMSKYAVVMLDEAHERTVATDVLFALLK 604 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 + PDL+++ TSAT+D ++FSR+F P++ V GRT+PVE+ Y + + E D Sbjct: 605 KAARANPDLRVLATSATLDADKFSRYFGGCPVLHVPGRTFPVEIMY------SREPEPDY 658 Query: 275 LQAIFDAVDELS-QESHGDILIFMSGEREIRDTADAL----NKLNLRHTE--ILPLYARL 327 + A D V ++ E GDIL+F++G+ EI +AL L E +LP Y+ L Sbjct: 659 VAAALDCVMQIHVAEDSGDILVFLTGQDEIDTCCEALEARIKTLGRAVPELLVLPAYSAL 718 Query: 328 SNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPI 385 +Q R+F+ R++VLATN+AETS+T+ GI+YV+DPG +++ Y R + L + Sbjct: 719 PPDQQARIFEPAPPGARKVVLATNIAETSITIDGIRYVVDPGFVKLNAYDPRLGMDSLVV 778 Query: 386 EPISQASANQRKGRCGRVSEGICIRLYSEDDFLS--RPEFTDPEILRTNLASVILQMTAL 443 PISQA ANQR GR GR + G C RLY+E+ F + RP T PEI R NL IL + A+ Sbjct: 779 SPISQAQANQRSGRAGRTAPGKCFRLYTEEAFRTEMRPN-TVPEIQRQNLEHTILMLKAM 837 Query: 444 GLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLA 503 G+ D+ F F++ P ++ L L A+ DE LT +GR+++ P++P LA Sbjct: 838 GIDDVLRFEFMDPPPAPTTVQALKELYVLDAL--DENG---HLTSMGRRMADFPMEPALA 892 Query: 504 RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN 563 + VL + C + + + + LS+Q+ RP DKQ A+D++ +RFH D L +N++ Sbjct: 893 KTVLASVDLSCASDVLSVVAMLSVQNVFYRPKDKQAAADQRKQRFHSVHGDHLTLLNVFR 952 Query: 564 YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIH 623 G +Q S R C +++ + ++ QL ++ + V+ A + Sbjct: 953 --GWEQSGRS----RSWCAENFVQERAMWRAFEVRKQLAAIMVRFRLDVHGSDAS--AVR 1004 Query: 624 IALLTGLLSHIGMKDADKQEYTG-ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 A G + +D + +T + P S ++ K +V+ L+ T++ + Sbjct: 1005 KAFCAGYFRNSAKRDPHEGIFTTLVDQTPVHLHPSSAVYGKSVDYVIYHTLLLTTKEYMH 1064 Query: 683 IAARIDPEWVEPVAQHLIK 701 + +DP+W+ +A + Sbjct: 1065 CVSVVDPKWLVELAPRFFQ 1083 >UniRef50_B9H2M0 Predicted protein n=9 Tax=Embryophyta RepID=B9H2M0_POPTR Length = 702 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 234/658 (35%), Positives = 359/658 (54%), Gaps = 50/658 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LPV + + IL + H I+ GETGSGKTTQ+P+ E G G +I TQPRRLA Sbjct: 52 LPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAV 111 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTI 194 +TVA+R+AEE+ + G +GY +RF D + TM+K +TDG+LL EI D LL +Y I Sbjct: 112 QTVASRVAEEMDVKLGEEVGYTIRFEDVTNPAATMIKFLTDGVLLREIMNDPLLTKYSVI 171 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA---------- 244 ++DEAHERS++ D LLG LK++ RRP+L++II+SATI+ + S F + Sbjct: 172 MVDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFQTSKKHRGPEDHE 231 Query: 245 -------PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIF 296 I+ V GR + V + Y +VE D +QA V + QE GDIL+F Sbjct: 232 FVPRKVPAILSVEGRGFNVHIHY--VVEPVS----DYVQATVSTVLSIHEQEPAGDILVF 285 Query: 297 MSGEREIRDTADALNKLNLRHTE-------ILPLYARLSNSEQNRVFQ--SHSGRRIVLA 347 ++G+ +I DTA L + +LPLY+ L ++Q+ VF R++V++ Sbjct: 286 LTGQDDI-DTAIRLLTEEAHASRKISSGLIVLPLYSSLPRADQDLVFSPTPRGKRKVVIS 344 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETSLT+ G+ YV+D G ++ Y+ + ++ L + PIS+ASA QR GR GRV G Sbjct: 345 TNIAETSLTLEGVVYVVDSGFSKQQFYNPISDIENLVVAPISKASARQRAGRAGRVRPGK 404 Query: 408 CIRLYSEDDFLSRPEFTD-PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RLY+E+ F++ PE+ R+ L S ++Q+ ALG+ +I F + +P + + Sbjct: 405 CYRLYTEEYFVNEMSSVGIPEMQRSKLVSCVIQLKALGIDNILGFDWPASPPPEAMIRAL 464 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 +L LG + D + + +P+G Q +++P+DP +++M+L + + GC E + I + LS Sbjct: 465 EVLYSLGVLDDDAKLT----SPVGFQAAEIPLDPMISKMILSSNQLGCSDEIITIAAILS 520 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 IQ Q+ DE RF E D + F+N+ Y G Q SS + C +Y+ Sbjct: 521 IQSIWVSGRGVQKELDEAKLRFAAAEGDHVTFLNV--YKGFLQSGKSS----QWCHKNYM 574 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQE--Y 644 NY +++ +I QLR+ LGI + S + + A+ G ++ +A Y Sbjct: 575 NYQAMKKVIEIREQLRRTALRLGIVLKSCEGDMLAVRKAVTAGFFANASRLEAFSHNGMY 634 Query: 645 TGARNAR-FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 R ++ I P S LF+ PKWV+ LV T R + R +DP W+ A H + Sbjct: 635 KTVRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDRQYMRNVMTVDPSWLTEAAPHFFQ 692 >UniRef50_Q55CD3 DEAD/DEAH box helicase n=2 Tax=Eukaryota RepID=Q55CD3_DICDI Length = 730 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 214/646 (33%), Positives = 366/646 (56%), Gaps = 39/646 (6%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LPV K +L+ ++H VI+ ETG+GKTTQ+P+ E G G+I TQPRR+A Sbjct: 71 ESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRRVA 130 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +++ R+++E+ E G +GY VRF D ++ T +K MTDG+L+ E D L +Y I Sbjct: 131 AVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVI 190 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPD---LKIIITSATIDPERFSRHFNNAPIIEVSG 251 I+DEAHER+LN D L G LK + RR LKIII SAT+D E FS++FNNAP++ + G Sbjct: 191 ILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEG 250 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIF-------------DAVDELSQESHGDILIFMS 298 R +PV++ Y ++ ++D + A ++++ +E GDIL+F++ Sbjct: 251 RQFPVQIYY------TEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLT 304 Query: 299 GEREIRDTA----DALNKLNLRHTEIL--PLYARLSNSEQNRVFQS--HSGRRIVLATNV 350 G EI + D + +L + +++ P+++ L +Q +VF+ R+++LATN+ Sbjct: 305 GRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNI 364 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLT+ GI+YV+D G + ++ + + L I PIS+ASA QR GR GR EG C R Sbjct: 365 AETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYR 424 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LY+++ F + PEI R+N+A+VILQ+ +G+ DI +F F+E+P ++ + LL Sbjct: 425 LYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKSLELLF 484 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 L AI+ + LT LG++++ P+DP ++ ++++ + C E +II S LS++ Sbjct: 485 CLDAISDNGS-----LTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESI 539 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 P +K++ ++ + F + D + F+N++ E QK+ ++ C ++N Sbjct: 540 FFTPKEKKKEVEDVKKIFFSPDGDHITFLNVFR---EFQKS-KPQQQQQWCFDHFINLKS 595 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 + + +++ QL + L +P+ S +++ I + + G + + DK+ T N Sbjct: 596 MIKVLNVFEQLVKYCISLKLPIVSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNK 655 Query: 651 RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 I P S LF + P+ ++ EL T++ + R I+ W+ + Sbjct: 656 EIQIHPTSFLFDQKPQHILYNELTITTKAFARNIIPIEGSWLAEIC 701 >UniRef50_C4LWD6 Helicase, putative n=10 Tax=Eukaryota RepID=C4LWD6_ENTHI Length = 675 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 238/626 (38%), Positives = 362/626 (57%), Gaps = 31/626 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM--ELGRGIKGLIGHTQPRRLA 134 LPV Q +++++ ++ ++V+I+ G TGSGKTTQ+PK C+ E+ G KG + TQPRR+A Sbjct: 40 LPVKQYEKEVINELKKNRVLILEGATGSGKTTQIPKFCLNPEICGG-KG-VCCTQPRRVA 97 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+AEE+ + G +GY VRF D SD T + MTDG+LL E+ D + +Y I Sbjct: 98 AISVAQRVAEEMDVQLGEEVGYCVRFDDCRSDKTKLTYMTDGMLLRELMGDPKIQKYGVI 157 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L G LK LL R DLKI++ SAT++ +F +F+NAP + V GRTY Sbjct: 158 LLDEAHERTVSTDILFGVLKSLLEEREDLKIVVMSATLEATKFKEYFDNAPNMSVEGRTY 217 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN 314 PV + Y + E D +A V ++ E GD+LIFM+GE EI + +N + Sbjct: 218 PVTINY------SRYPENDYFEAAVKVVSKIDNEPEGDVLIFMTGEEEIEEMVARINSMK 271 Query: 315 LR-HTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 + H LPLY+ L EQ RVF+ +GR+++++TN+AETS+T+ GI YVID G + Sbjct: 272 TKSHMIALPLYSALPQQEQQRVFEKVNGRKVIVSTNIAETSVTIDGIVYVIDTGYVKQKV 331 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTN 432 Y T+V+ L + ISQA+A QR GR GR G C RLY+E F S P+ T PE+LRT+ Sbjct: 332 YLPSTRVETLQVTAISQAAAQQRAGRAGRTRPGQCYRLYTEKGFNESLPKQTVPEMLRTS 391 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LASVIL M +G+ DI F +++AP Q VR LE+L + + + LT +G + Sbjct: 392 LASVILHMKKIGIKDILHFDYLDAPSP---QVMVRALEQLYYLNALDDKT--NLTEIGSK 446 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS--DEKHRRFHD 550 +S++PVDP+LA ++ + + V E I S L++ RP ++++ S D F+D Sbjct: 447 ISEIPVDPQLAVTLIASIDYNVVDEISTIVSLLNVPSIFYRPKEQEEKSKADAAKAYFND 506 Query: 551 KESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI 610 ESD + +N +N E K + +Y+N +++ + I QL ++ +G+ Sbjct: 507 HESDHITLLNTYNAWIENGKD------SKWAWNNYVNQRALKQAESIKNQLLGILYRMGV 560 Query: 611 PVNSEPAE-YREIHIALLTGLLSHIGMKDAD--KQEYTGARNARFSIF-PGSGLFKKPPK 666 +P E R+ + L M+ A K Y + R + P S + K+ + Sbjct: 561 KQQQKPIEDVRKRKELIRKALCKGFFMQSAHQVKGGYQIVCDNRIVLLHPSSCIGKR--E 618 Query: 667 WVMVAELVETSRLWGRIAARIDPEWV 692 W++ E V T R + R A+ I PEW+ Sbjct: 619 WILYNEYVMTKREYVRTASSIQPEWL 644 >UniRef50_C9ZMN0 ATP-dependent RNA helicase, putative n=4 Tax=Trypanosoma RepID=C9ZMN0_TRYBG Length = 742 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 225/655 (34%), Positives = 358/655 (54%), Gaps = 58/655 (8%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LPV Q+ +++ + +RDHQVV+ GETGSGKTTQ+P+ E+ + G++ TQPRR+AA Sbjct: 82 TLPVYQRAKELTQNMRDHQVVLFVGETGSGKTTQVPQFISEME--LPGVVVCTQPRRIAA 139 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A R+A E+ + G +GY+VRF VSD T + MTDG+LL E DR L + ++ Sbjct: 140 MSIAVRVAAEMDVQLGEEVGYRVRFKSMVSDKTKLLYMTDGMLLREAFSDRDLSRISVVV 199 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHER++ D LLG L+ L+ RR D ++++ SAT+D ERF +F AP+I+V GR Y Sbjct: 200 VDEAHERTVETDVLLGVLRLLMQRRQDFRLVVMSATLDMERFQAYFPKAPLIQVEGRMYD 259 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN 314 V+V Y + +D ++A + V ++ E GDIL F++GE EI + A + KL Sbjct: 260 VQVLYSTV------PVKDYVEACVERVCDIHLNEPPGDILCFLTGEAEI-ERAVSRTKLK 312 Query: 315 LRH-----------------TEILPLYARLSNSEQNRVFQSHSG---RRIVLATNVAETS 354 L H +LPLY L +Q RVF S++G R+I+ ATN+AETS Sbjct: 313 LEHLLADDGNTVSSNGAQLLARVLPLYGSLGVDDQGRVF-SNAGKNTRKIIFATNIAETS 371 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LT+ GI YV+D G + S Y+ +V L IS+ASA QRKGR GR G C RL+ + Sbjct: 372 LTIDGIVYVVDCGYHKQSLYNAEARVDYLLPAVISKASAEQRKGRAGRTRPGKCFRLFQQ 431 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 DF S P T PE+LR+N+ + +L + L + + F F++ P ++++ D L GA Sbjct: 432 SDFSSFPNQTHPEVLRSNMINTVLLLLKLDVTNPYQFAFIDPPSQQSVMDAYCQLSLFGA 491 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + D Q LT GR ++ PVD LAR+++ + ++GC +A +I + L ++ RP Sbjct: 492 VDDDLQ-----LTDFGRLMADFPVDACLARVLMRSAQYGCAADAAVIVAMLETRNVLVRP 546 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 + +++KH F + D L +++ ++ + C ++L Y +++ Sbjct: 547 ASRGIEAEQKHVMFRHPDGDHLTLFKVFHAFWRSGQS------SQYCFDNFLAYQALQQA 600 Query: 595 QDIYTQLRQVVKELGIPV------NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR 648 ++YTQL +++K+ I S + I A+L G + + K + Y R Sbjct: 601 VNVYTQLTKLMKKKNICFVSTYDDRSGKLDSVAIRKAVLEGFFTQVAYKPPGGELYKTVR 660 Query: 649 NARFSI-----FPGSGLFKKPPKWVMV--AELVETSRLWGRIAARIDPEWVEPVA 696 +++ FP P W++ E+ + R+A+ I+PEW+ V+ Sbjct: 661 DSQMVALHRHSFPS---MSGSPSWIVYDRLEVQGQGGTFIRVASAIEPEWLLEVS 712 >UniRef50_A7E6W3 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E6W3_SCLS1 Length = 696 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 241/701 (34%), Positives = 370/701 (52%), Gaps = 87/701 (12%) Query: 69 PEITYPDNL-PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIG 126 P + P +L P++Q ++ +L I + V IV G TGSGKTTQ+P+ + G G I Sbjct: 12 PALHKPSSLLPIAQHRESLLYLIESYPVTIVIGHTGSGKTTQIPQFLEKAGWCANGKQIA 71 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AA TVA R+AEE+ E G +GY +RF D S T +K +TDG+LL E D Sbjct: 72 VTQPRRVAATTVAIRVAEEVGCEVGKEVGYSIRFEDVTSAATKIKFLTDGLLLREALVDP 131 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP-DLKIIITSATIDPERFSRHFNNAP 245 LL +Y I++DEAHERSL+ D LLG LK++L +RP DL+III+SAT+ E F F+N P Sbjct: 132 LLSRYSVIMVDEAHERSLSTDILLGVLKKILKKRPNDLRIIISSATLQAEDFLNFFSNDP 191 Query: 246 ------------------------------------IIEVSGRTYPVEVRYRPIVEEADD 269 II + GR YPV++ Y ++ Sbjct: 192 EVEAKPNVDDAMTLDDLIAQGSSSTNGSKNDGKIGQIISLEGRMYPVDILY------LEN 245 Query: 270 TERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALNK----LNLRHTEI--LP 322 D L+ D V ++ ++E GDIL+F++G EI A+++ L+ R + LP Sbjct: 246 PAEDYLERAIDTVFDIHTKEPDGDILVFLTGREEIDKAVQAISERAASLHPRSQALMPLP 305 Query: 323 LYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 LYA LS +Q VF+ + R+++ +TN+AE S+T+ GI YV+D G ++ Y+ T + Sbjct: 306 LYAGLSTEQQMFVFELAQENTRKVIFSTNIAEASVTIDGIIYVVDCGFVKLRAYNPITGI 365 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQM 440 + L PIS+ASA QR GR GR G C RLY+E +F + E T PEI R+NLA +ILQ+ Sbjct: 366 ETLTATPISKASATQRSGRAGRTKPGKCFRLYTEANFQALEEATVPEIQRSNLAPIILQL 425 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVD 499 ALG+ +I FPF+ +P I G+ LL LGA+ T KLT PLG ++++L V+ Sbjct: 426 KALGIDNIVRFPFLTSPPAELIIRGLELLYSLGALDT-----YAKLTKPLGTRMAELAVE 480 Query: 500 PRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQASDEKHRRFHDKESDFLAF 558 P +A+ +L A C+ E + I + S+ + D+++A + R+F +E D + Sbjct: 481 PMMAKTLLSASSFNCLSEILTIAAMTSVGGNIFYNDYDEKKAMETAKRKFAVEEGDHITL 540 Query: 559 VNLWNYL---GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615 +N++ G++Q R C +YLN+ + + I +QL++ ++ GI ++ Sbjct: 541 LNIYQSFITKGKKQP--------RFCHDNYLNFKALSKAISIRSQLKRYLERFGISIDET 592 Query: 616 --------------PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF 661 P + +I L TG +H D P S +F Sbjct: 593 LSSSSNPNMLSVGGPDKSEQIRRCLTTGYFAHAAKMQPDGTFRNIGGGTILHAHPSSLMF 652 Query: 662 KKPPKWVMVAELVET-SRLWGRIAARIDPEWVEPVAQHLIK 701 + +WV+ +E+VE ++++ R +RI+ W+ A K Sbjct: 653 NRKCEWVVFSEVVELGAKVYIRDLSRIEKGWLVEYAPEFYK 693 >UniRef50_A5E397 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E397_LODEL Length = 1015 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/577 (36%), Positives = 339/577 (58%), Gaps = 33/577 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LP+ + K+D++ IRD+Q +++ GETGSGKTTQ+ + E+G +IG TQPRR+AA Sbjct: 427 SLPIYKMKRDLINQIRDNQFLVIVGETGSGKTTQIVQYIYEVGLNQSKIIGCTQPRRVAA 486 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VA R+AEE+ GG +GY VRF D S NT +K +TDG+LL E D L +Y I+ Sbjct: 487 TSVARRVAEEMDVHLGGLVGYNVRFDDKTSTNTKIKYLTDGMLLREALTDPSLSKYSVIM 546 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHER++ D L G LK+ P+LK+I+TSAT+D +FS+ FN+ P+I + GRT+P Sbjct: 547 LDEAHERTIATDVLFGLLKKAAKANPNLKVIVTSATLDSNKFSKFFNSCPVINIPGRTFP 606 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN-KL 313 V++ Y + E D L A D+V ++ E GDIL+F++G+ EI ++ L ++ Sbjct: 607 VDIVY------TNKPEMDYLAAAIDSVCQIHISEPAGDILVFLTGQEEIEVASEILQERM 660 Query: 314 NLRHTE-----ILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDP 366 + ILP Y+ L + EQ R+F+ R++VLATN+AETSLT+ GIKYV+D Sbjct: 661 KMLQPNDPLMIILPCYSSLPSDEQLRIFEETPAGMRKVVLATNIAETSLTIDGIKYVVDS 720 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDP 426 G +++ + L I PISQA A+QR GR GR G C RLY+E + + P Sbjct: 721 GYCKLNLQDVTLGLDMLKICPISQAQASQRSGRAGRTGPGKCYRLYTESIYSKLAPSSTP 780 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI R NLAS +L + A+ L + F +++ P + + + L++L A+ DE+ ++ Sbjct: 781 EIRRRNLASSVLMLKAMHL---STFEWMDPPSMQAVNAAYKQLKQLKAL--DEK---LEI 832 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T LG LS++P +P LA+ +L +++ GC E + I + LSIQ+ RP +++ +D+ Sbjct: 833 TKLGVDLSKIPTEPSLAKCILLSEEMGCTMEMLAIVAMLSIQNVFHRPKAQRKLADQVIA 892 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL--CRTDYLNYLRVREWQDIYTQLRQV 604 R+ SD + + ++ + + A R+L C+ +++ + +R+ Q I QLR + Sbjct: 893 RWTHSISDHITLLRVYTEFVKVESA------RKLDWCKRNFVQHSSLRKAQQIVEQLRSI 946 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADK 641 + + S+ E I + LT LS I + +++ Sbjct: 947 CRFNNRDLQSKQKE--RIILNCLTNGLSQIQIDGSNR 981 >UniRef50_B4JQ72 GH13648 n=1 Tax=Drosophila grimshawi RepID=B4JQ72_DROGR Length = 698 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 227/637 (35%), Positives = 351/637 (55%), Gaps = 35/637 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LPV +Q IL+ + + +++ GETGSGKTTQ+P+ ++ G G+IG TQPRR+AA Sbjct: 71 SLPVYNCRQRILKELEANDTLLIMGETGSGKTTQIPQFLLQAGYANGGIIGITQPRRVAA 130 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 T+A R+A+EL T G +GY VRF D ++ T ++ MTDGILL E DRLL +Y I+ Sbjct: 131 ITIAKRVAQELATGIGETVGYTVRFEDATTERTRIRYMTDGILLREAIGDRLLRKYSAIM 190 Query: 196 IDEAHERSLNIDFLLGYLKELLPRR-----PDLKIIITSATIDPERFSRHFNNAPIIEVS 250 +DEAHER++N D L G +K+ R P LKIIITSAT+D + F ++F + + Sbjct: 191 LDEAHERTVNADVLFGIVKQAQLERAKQRLPKLKIIITSATMDIDHFGQYFGVRGMY-LE 249 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES--HGDILIFMSGEREIRDTAD 308 GRT+PV V + A D++ D + A + ++ + + D+LIF++G+ EI A Sbjct: 250 GRTHPVRVLH------AKDSQEDYIHAALVTLFDIHRHEPINHDVLIFLTGQEEIEALAQ 303 Query: 309 A------LNKLNLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGI 360 +N + LYA+L+ +Q F + R+IVLATN+AETS+T+PGI Sbjct: 304 QIRQLARINNTGPSDVRVFTLYAQLAQGKQLECFLPVPANTRKIVLATNIAETSITIPGI 363 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 + VID G + ++ T ++ L ISQA A QR GR GR + G C R YS+ Sbjct: 364 RCVIDCGYVKEKSFNPGTGLELLKTVRISQAQAWQRCGRAGRDAPGKCYRTYSKASMEQF 423 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 + PEILR+NL S +LQ+ ALG+ D + F F++AP I R LE+LGAI + Sbjct: 424 RSTSLPEILRSNLTSTVLQLLALGI-DCSNFDFIDAPPPEGISSAHRALEQLGAI----K 478 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 + +T GR ++Q P+DPR A+++L A GC+ E + + +ALS + DK + Sbjct: 479 PAPLVITTTGRWMAQFPLDPRYAKLLLSAPSFGCMEEMLSLVAALSSDNVFIGHTDKSEL 538 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 + H +F K D L +N+++ + +K + C ++LN + +++ Q Sbjct: 539 AALAHAKFQSKHGDHLTLLNVFSTFQKTEKP------KIWCHDNFLNIRNLTYARNVRNQ 592 Query: 601 LRQVVKELGIPVNSEPAEYRE-IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 L ++ L + +NS + + + LLTGL +I + + T + + I P S Sbjct: 593 LAEISGRLNLAINSCGGDNVDAVKKCLLTGLFENIALLQKEGHYLTVSGRVKAKIHPSSV 652 Query: 660 LFKK-PPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 L K P+ ++ E+V+T + R I EWVE V Sbjct: 653 LHGKYKPQCILFTEMVQTEHNFLRQVTEISSEWVEEV 689 >UniRef50_Q0UY60 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UY60_PHANO Length = 857 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 236/666 (35%), Positives = 364/666 (54%), Gaps = 53/666 (7%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLA 134 +LP+ + +++ ++A+ +HQ++++ G TGSGKTTQL + E G L IG TQPRR+A Sbjct: 183 SLPIYKYREEFIQAVSEHQIIVLVGATGSGKTTQLTQYLNESGYAKNSLRIGCTQPRRVA 242 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VANR+A E+ T+ G +GY VRF +SD+T ++ MTDG+ L D L Y + Sbjct: 243 AISVANRVAAEVGTKIGRRVGYSVRFESAMSDDTQIEYMTDGLALRLCLTDPTLSDYSVM 302 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHER+L D L+ LKE+ RP+ ++II SAT+ ++FS +F++API+ + GRT+ Sbjct: 303 ILDEAHERTLATDILMSLLKEICLARPEFRLIIASATLAAQKFSTYFHDAPIMNIPGRTF 362 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-------GDILIFMSGEREIRDTA 307 P+ + + E + L A V ++ S+ GDILIF +GE EI A Sbjct: 363 PITKAH------STQPEANYLSAAVTTVFQIHLGSNGSMNDVKGDILIFFTGEEEILAAA 416 Query: 308 DALN----KLNLRHTEIL--PLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPG 359 D +N KL R ++ P+Y L + Q +F R++VLATN+AETSLT+ G Sbjct: 417 DYINDTQKKLGSRSPPLIVAPVYGALPSEAQQLIFNPAPPGSRKVVLATNIAETSLTIDG 476 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I YVID G + + ++ T + L P S+ASA QR GR GR G+ RLY++ F Sbjct: 477 ISYVIDCGLEKQNSFNAATNMASLVTVPCSRASAEQRAGRAGRTGPGMAFRLYTKYAFYH 536 Query: 420 R-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL--------LE 470 PE + PEILR +L +L + A+G+ D+ F F+ +Q G +E Sbjct: 537 ELPESSLPEILRISLDGPVLTLKAMGIHDVLHFDFMVRISYPEVQIGTLANHPQDAPPVE 596 Query: 471 ELGAITTDEQASAY-----KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 L A A Y +T LGR+ S+LP+DPRLA+++L A GCV E I+T Sbjct: 597 ALAASLETLYALGYLDSNGAVTKLGRRASELPLDPRLAKVLLTADSLGCVDE--IVTLVA 654 Query: 526 SIQDPRE---RPMDKQQASDEKHRRFHDKES----DFLAFVNLWNYLGEQQKALSSNAFR 578 +Q+ P DK+ A++ RF + D +AF+N+WN E +++ Sbjct: 655 MVQEAGTLFFAPKDKKVAAEHAKARFTSSVAGTGGDLIAFLNVWNEFVENDYSVT----- 709 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA-EYREIHIALLTGLLSHIGMK 637 CR +++ Y + +D+ QL ++ + + I +S EY +I A ++G +++ Sbjct: 710 -WCRDNFVQYRCLNRVRDVRDQLVKLCERVEIFESSCGVHEYVKILKAFVSGYFANVARL 768 Query: 638 DADKQEY-TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 + D Q Y T + +I P S L PK ++ AELV TS+ + R A I+P W+ +A Sbjct: 769 NRDGQTYRTLKQGLSVNIHPSSCLRDVRPKLIVFAELVLTSKEFARTCAPIEPAWLTEMA 828 Query: 697 QHLIKR 702 H K+ Sbjct: 829 PHYHKQ 834 >UniRef50_D0MZQ2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ2_PHYIN Length = 910 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 226/653 (34%), Positives = 359/653 (54%), Gaps = 58/653 (8%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + I+EA+ D+QVVI+ GETGSGKTTQ+P+ E R + TQPRR+AA Sbjct: 271 LPIYAHRSKIIEAVNDNQVVILVGETGSGKTTQIPQYIWESDRA-HARVAITQPRRVAAI 329 Query: 137 TVANRIAEELKTEP-GGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 TVA R+ EE P G +GY VRF D S NT +K MTDG+L+ E L +Y ++ Sbjct: 330 TVAQRVCEEANRGPLGDSVGYCVRFDDTTSKNTRLKFMTDGMLVREALLSPTLERYSVVV 389 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--APIIEVSGRT 253 +DEAHER+L D L G +K + +R DLK+++ SAT+D F R F + +I++ GR Sbjct: 390 LDEAHERTLQTDILFGIVKRAMRKRKDLKVVVMSATLDVALFKRFFQDFKPAVIQIPGRM 449 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE---SHGDILIFMSGEREIRDT---- 306 + V+V Y T+ D L + AV ++ E S+G IL+F++G+ +I Sbjct: 450 FQVDVFY------TAKTQPDYLDSALVAVLQIHLEEKTSNGSILVFLTGQEDIETLETLL 503 Query: 307 --------ADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLT 356 ADAL + + P++A + +Q +VF+ R+++LATN+AETS+T Sbjct: 504 EEYARSLPADALKLM------VCPIFAAMPREQQMKVFEPAPAGVRKVILATNIAETSIT 557 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + G++YV+D G + + + ++ L E +S+A A QR GR GR + GIC RL+ E+ Sbjct: 558 INGVRYVVDTGLVKQRSFVASSGMEMLQTESVSKAQAWQRTGRAGREAPGICYRLFPEET 617 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F PE P+I R +L V+LQ+ +G+ D AF F+E P K ++ + L LGA+ Sbjct: 618 FEQLPERAIPDIQRVSLEVVVLQLKIMGIDDALAFDFIEKPLKTSLVKALEKLYALGAL- 676 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 D + KLT LGRQ++ LPV+P A M+L+A + GC EA+ + + LS++ P D Sbjct: 677 -DNKG---KLTTLGRQMAGLPVEPMYAVMLLKATELGCAEEALSVVAMLSVESIFYSPRD 732 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWN-YL--GEQQKALSSNAFRRLCRTDYLNYLRVRE 593 K+ + + RF E D + +N++N Y+ G +Q+ + CR Y+N+ + Sbjct: 733 KKAEAAQSRARFVAYEGDQITLLNVFNGYIQCGSKQR-------NKWCRDHYINHRAMTR 785 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD------ADKQEY--T 645 + + QL+ +++L +P+++ + + +++ G + M+ K Y Sbjct: 786 VESVRLQLKGYLEKLELPIDTSFPDIDPLRKSIVAGFFLNTAMRSVAEGLGGSKTAYKTM 845 Query: 646 GARNARFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 R+ + P S LF + PPKWV+ ELV TS+ + R I+ EW+ +A Sbjct: 846 CGRSEIVKVHPSSSLFMRNPPPKWVVYNELVFTSKHYIRSVLVIEKEWLVELA 898 >UniRef50_Q9VL25 CG4901 n=10 Tax=Drosophila RepID=Q9VL25_DROME Length = 694 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 226/657 (34%), Positives = 358/657 (54%), Gaps = 30/657 (4%) Query: 53 EIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPK 112 +I Q +LL +LPV + IL+ + + V++ ETGSGKTTQ+P+ Sbjct: 44 QIKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQ 103 Query: 113 ICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKL 172 + G G+IG TQPRR+AA TVA R+A+EL G +GY VRF D S T ++ Sbjct: 104 FLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRF 163 Query: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR-----PDLKIII 227 +TDG+LL E +DRLL++Y II+DEAHER++N D L G +K+ R +LK+++ Sbjct: 164 LTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVV 223 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ 287 TSAT+D + F +FN + + GRTYPV V + EE +D L +F + + Sbjct: 224 TSATMDIDHFGNYFNCKGMY-LEGRTYPVRVMHTK--EEHEDYIHTVLVTLFH-IHRTTP 279 Query: 288 ESHGDILIFMSGEREIRDTADALNKLNLRHTE------ILPLYARLSNSEQNRVF--QSH 339 ++H D+LIF++G+ EI A + +L T + LYA+LS +Q F Sbjct: 280 KNH-DVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPA 338 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 + R+++LATN+AETS+T+PGI+ VID G + ++ + L IS+A A QR GR Sbjct: 339 NVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGR 398 Query: 400 CGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459 GR ++G C R Y++ + S + T PEILRTN S++LQ+ AL + D F F++ P + Sbjct: 399 AGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLE 457 Query: 460 RNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAM 519 ++ + L+ LGAI T + + +TPLGRQ+ Q P+DP+ ++++L A GC+ E + Sbjct: 458 DGLRSAYKSLDALGAIKTGDDSY---ITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEIL 514 Query: 520 IITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR 579 + S LS +K + + H +F K D L +N++N + +K + Sbjct: 515 SLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKP------KM 568 Query: 580 LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA 639 C +YLN + +++ QLR++ + L + +NS + + +L G +I + Sbjct: 569 WCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSD-DIEMLKKCILNGFFENIAVLQR 627 Query: 640 DKQEYTGARNARFSIFPGSGLFKK-PPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 D T + N R I P S L K P +++ E+V+T + + R I EW++ V Sbjct: 628 DGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEV 684 >UniRef50_Q4N829 RNA helicase, putative n=2 Tax=Theileria RepID=Q4N829_THEPA Length = 974 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 227/681 (33%), Positives = 373/681 (54%), Gaps = 81/681 (11%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + ++L AI+ ++ +IV GETGSGKTTQ+P+ E+G G+IG TQPRR+AA Sbjct: 309 LPIYYYRTELLSAIKKYKTLIVVGETGSGKTTQIPQYLHEVGYSRAGVIGITQPRRVAAM 368 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+++EL + G +GY +RF D+ S NT +K MTDGILL E + L Y I+I Sbjct: 369 SVATRVSKELNVKMGSTVGYCIRFEDYTSSNTKIKYMTDGILLREFASNPTLENYSVIMI 428 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+L+ D + G +K+L+ R D ++II+SAT++ E+F+ +F+NAPI ++ GR YPV Sbjct: 429 DEAHERTLHTDVIFGLVKDLIRYRNDFRLIISSATLEAEKFALYFDNAPIFKIPGRRYPV 488 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDE--LSQESHGDILIFMSGEREIRDTADAL---- 310 ++ Y E + L A + + L+Q GDIL+F+ G++EI + L Sbjct: 489 QIYY------TKTPEANYLDASIITILQIHLTQPIDGDILVFLPGQQEIEYIQEELIARL 542 Query: 311 -NKLNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 N+ ++R IL +Y+ L + QN++F+ + R+++L+TN++ETS+T+ I YVID G Sbjct: 543 KNRKDIRELIILSIYSSLPSDMQNKIFEPTPENSRKVILSTNISETSITLDNIVYVIDTG 602 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT-DP 426 ++S YS +T + L + P S+A+ANQR GR GRV G C RLY++ + E +P Sbjct: 603 FCKLSLYSPKTGLDSLIVVPCSKANANQRSGRAGRVRAGHCFRLYTKLSYDKEMEDNHEP 662 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI R NL+SV+L + ++G+ D+ F F++ P ++ + + L+ LG + + +L Sbjct: 663 EIKRVNLSSVVLLLKSIGIDDLLNFDFMDPPTPESLINSLELIYSLGCLN-----DSGEL 717 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ----------DPRERPMD 536 T LG+ +S+LP+DP ++ +L + +H C + +II S L IQ + P Sbjct: 718 TKLGKIMSELPLDPMYSKSLLFSIQHNCHEDIIIILSML-IQSIFYLVIHSFNLHTYPNS 776 Query: 537 KQQASDE------KHRRFHDK---------ESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 Q K RR H + SD L +N++N E +++ C Sbjct: 777 ISQRLGNNIFYIPKDRRIHAENNYKNFYNNNSDHLMLLNVYNQWKENDFSIA------WC 830 Query: 582 RTDYLNY-------------------LRVREWQDIY--TQLRQVVKELGIPVNSEPAEYR 620 +YL Y L + + + Q Q KE+G +N Sbjct: 831 YENYLQYKSLIQIQNIIQQLQNLITRLNLVDGDTVNGDVQNNQKDKEIGSNMNYNDV--- 887 Query: 621 EIHIALLTGLLSHIGMKDADKQE--YTGARNAR-FSIFPGSGLFKKPPKWVMVAELVETS 677 I +++G +++ +K+ K E Y ++ + I P S +FK+ K+V+ +LV T+ Sbjct: 888 -IMKCIVSGFFTNVAVKNEKKSEKNYKTIKSKQVVYIHPNSSVFKQNIKFVVYNDLVLTT 946 Query: 678 RLWGRIAARIDPEWVEPVAQH 698 + + R + I +W+ +A H Sbjct: 947 KHFIRQVSEIQAKWLMELAPH 967 >UniRef50_Q9BKQ8 Probable ATP-dependent RNA helicase DHX35 homolog n=5 Tax=Bilateria RepID=DHX35_CAEEL Length = 732 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 228/646 (35%), Positives = 351/646 (54%), Gaps = 43/646 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LP+ + + IL ++ +I+ GETG GK+TQ+P+ +E G G I TQPRR+A Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAV 136 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 T+A R+AEE G +GY VRF D +T VK MTDG+LL EI D LL +Y I+ Sbjct: 137 VTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIM 196 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----------NNAP 245 IDEAHERS N D LLG L++++ R DL+II++SAT+D E F F + A Sbjct: 197 IDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAG 256 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIR 304 II V GRT+PV V + + D Q+ D V + + E+ GDIL+F++G+ E+ Sbjct: 257 IISVEGRTHPVAVHH------TKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVE 310 Query: 305 DTADALNKL--NLRHTE---ILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTV 357 D + L +L NL++ + ++P Y L EQ + F S H R++V+ATN+AE S+T+ Sbjct: 311 DVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITI 370 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI YVID G ++ V+ L +S+ASA QR GR GR+ G C RLY E +F Sbjct: 371 PGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF 430 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 E T PEI R +AS ILQ+ ALG+ ++ F ++ P + +G+ LL LGAI Sbjct: 431 ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDE 490 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 Q + +PLG Q+++ P+ P ++ +L++ + GC E + I + + IQD P + Sbjct: 491 TSQLT----SPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQ 546 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 + +D ++F +E D + +N++ E ++ ++ C ++NY + ++ Sbjct: 547 RHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRS------KKWCSDHFVNYRGLMRADNV 600 Query: 598 YTQLRQVVKELGIPVNSEPA---EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 +QL +++K I S I L+TG S + T + F++ Sbjct: 601 RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM 660 Query: 655 FPGSG-LFKKP-PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 + GS +FKK PKWV+ E+++ S R I+PEW+ +A H Sbjct: 661 YKGSSIMFKKDYPKWVIFTEVMQDSI---RDVTVIEPEWLYELAPH 703 >UniRef50_P15938 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=7 Tax=Saccharomycetaceae RepID=PRP16_YEAST Length = 1071 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 246/648 (37%), Positives = 364/648 (56%), Gaps = 50/648 (7%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG----RGIKGLIGHTQP 130 + LPV + + +L IR++QVV++ GETGSGKTTQL + E G RG ++ TQP Sbjct: 348 EQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV--TQP 405 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHV-SDNTMVKLMTDGILLAEIQQDRLLM 189 RR+AA +VA R+A E++ G +GY +RF D S+ T +K +TDGILL E D L Sbjct: 406 RRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLD 465 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +Y +IIDEAHERSLN D LLG+ K LL RR DLK+IITSAT++ ++FS F NAP + Sbjct: 466 KYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTI 525 Query: 250 SGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTA 307 GRT+PV+ Y P+ D E QA+ + + S GDILIFM+G+ +I T Sbjct: 526 PGRTFPVQTIYTSNPV---QDYVEAAVSQAV--KIHLANDCSSGDILIFMTGQEDIETTF 580 Query: 308 DAL---------------NKLNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNV 350 D L N + EILP+Y+ L Q ++FQ G R+I++ATN+ Sbjct: 581 DTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNI 640 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLT+ GI+YVID G +++ Y+ + + L I PIS+A+A+QR GR GR + G R Sbjct: 641 AETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYR 700 Query: 411 LYSEDDFLSRPEF-TDPEILRTNLASVILQMTALGLGD-IAAFPFVEAPDKRNIQDGVRL 468 LY+ED F T PEI RTNL++ +L + +L + D ++ FPF++ P + + Sbjct: 701 LYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYE 760 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L +GAI T Q LTPLG Q+++ P+ P L++++L A ++GC E + I S LS+ Sbjct: 761 LWFIGAIDTSGQ-----LTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVP 815 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 RP ++Q+ +D +F +SD L +N++ EQ +A +N C ++ Y Sbjct: 816 QVFYRPKERQKEADIARNKFFIAKSDHLTLLNVF----EQWRA--NNFSSHWCNKHFVQY 869 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR 648 + +DI QL ++K IPV S ++ I + +G +H K + Y + Sbjct: 870 KSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICSG-FAHQAAKITGLRNYVHLK 928 Query: 649 NA-RFSIFPGS---GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + P S GL PP +V+ EL+ TS+ + +DP W+ Sbjct: 929 TGVSVQLHPTSALHGLGDLPP-YVVYHELLMTSKEYICCVTSVDPFWL 975 >UniRef50_A5AMC2 Putative uncharacterized protein n=2 Tax=Eukaryota RepID=A5AMC2_VITVI Length = 855 Score = 362 bits (928), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 221/623 (35%), Positives = 350/623 (56%), Gaps = 55/623 (8%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ ++++L+ IR++QVV+V GETGSGKTTQL + E G G++G TQPRR+AA Sbjct: 197 LPIYSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLHEDGYTTNGIVGCTQPRRVAAM 256 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE++TE G +GY +RF D NT +K MTDG+L+ E +D L +Y +++ Sbjct: 257 SVAKRVSEEMETELGDKVGYAIRFEDVTGPNTKIKYMTDGVLMRETLKDSELDKYRVVVM 316 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLN D L G LK+++ +R D K+I+TSAT++ ++FS F + PI + GRT+PV Sbjct: 317 DEAHERSLNTDVLFGILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFPV 376 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR 316 + Y E D V+ G + M+G L+ Sbjct: 377 NILYSKTPCE-------------DYVE-------GAVKQAMTG---------CLSSQYSL 407 Query: 317 HTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRY 374 +T LP A L Q ++FQ R+ ++ATN+AETSLTV GI YVID G ++ Y Sbjct: 408 YTPQLP--ADL----QAKIFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVY 461 Query: 375 SYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD-PEILRTNL 433 + R + L + P+S+A+A+QR GR GR G C RLY+E +L+ + PEI RTNL Sbjct: 462 NPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNELLASPVPEIQRTNL 521 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 +V+L + +L + ++ F F++ P + NI + + L LGA+ + LT LG ++ Sbjct: 522 GNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQLWVLGALN-----NVGGLTELGWKM 576 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKES 553 + P+DP LA+M+L ++ C+ E + I S LS+ RP D+ + SD +F ES Sbjct: 577 VEFPLDPPLAKMLLIGEQLECINEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPES 636 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFR-RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 D L +N++ +Q KA N +R C +L+ +R+ +++ +QL ++K L IP+ Sbjct: 637 DHLTLLNVY----QQWKA---NQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPL 689 Query: 613 NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGSGLF--KKPPKWVM 669 S ++ + A+ + H + EY RN + P S L+ P +V+ Sbjct: 690 TSCGPDWDVVRKAICSAYF-HNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVV 748 Query: 670 VAELVETSRLWGRIAARIDPEWV 692 EL+ T++ + + A ++P+W+ Sbjct: 749 YHELILTAKEYMQCATAVEPQWL 771 >UniRef50_C5LYU2 ATP-dependent RNA helicase DHX8, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LYU2_9ALVE Length = 1016 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 218/633 (34%), Positives = 348/633 (54%), Gaps = 62/633 (9%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LP+ + + +L+A+ ++QV+IV GETGSGKTTQ+ + E G G+IG TQPRR+A Sbjct: 405 EGLPIFKLRSQLLQAMAENQVLIVIGETGSGKTTQMTQYMAEAGYADHGIIGCTQPRRVA 464 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A TVA R+AEE G +GY +RF DH S T +K MTDG+LL E D LL +Y I Sbjct: 465 AITVAKRVAEEYGCRLGQEVGYTIRFEDHTSPETRIKYMTDGMLLREALADPLLKKYSVI 524 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L G KE + R DLK+I+TSAT+D E+FSR+F ++ I + GRT+ Sbjct: 525 MLDEAHERTIHTDVLFGLCKEAIRERNDLKLIVTSATLDAEKFSRYFFDSHIFTIPGRTF 584 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL 313 PVE+ Y +++ E D +QA V ++ E GDIL+F++G+ EI DTA L L Sbjct: 585 PVEILY------SNEPEEDYVQAALMTVMQIHLTEQPGDILVFLTGQEEI-DTACQL--L 635 Query: 314 NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 + R ++ P+ +P Y P + S Sbjct: 636 DERMAQLAPM----------------------------NPPPLIPMGVYAAQPSEVQSSI 667 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD---PEILR 430 + + P + A+A QR GR GR G C RLY+E F R E PEI R Sbjct: 668 F------EPAPXSRLPTANARQRAGRAGRTGPGKCYRLYTEKAF--RTEMLPSAVPEIQR 719 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 +NL++V+L + A+G+ D+ F F++AP + + + + L +LGA+ D++ LT LG Sbjct: 720 SNLSNVVLTLKAMGINDLLGFDFMDAPPVQTLINSLEALWQLGAL--DDEG---LLTKLG 774 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 R++++ P+ P ++M+L + GC EA+ + + LS+Q+ RP DKQ +D+K +F+ Sbjct: 775 RKMAEFPMPPEQSKMLLASVDLGCADEAITVVAMLSVQNVFYRPKDKQAVADQKKSKFNS 834 Query: 551 KESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 E D + + ++ KA S N F C +++ +R+ QD+ QL ++ Sbjct: 835 PEGDHVTLLEVY-------KAWSRNRFSAPWCYENFIQVRSLRKAQDVRKQLIGIMDRYR 887 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM 669 + +NS +Y + A+ G +++ +D ++ + I P S L++K P+WV+ Sbjct: 888 LEINSCGQDYNRLRQAIAAGYFNNLCRRDPNEGYRVMRDLQQVYIHPSSALYQKNPEWVI 947 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 ELV T+R + R ++PEW+ +A ++ K+ Sbjct: 948 YYELVMTTREYIREVCTVEPEWMPKIAPNMFKQ 980 >UniRef50_Q38AN5 Pre-mRNA splicing factor ATP-dependent RNA helicase, putative n=7 Tax=Trypanosomatidae RepID=Q38AN5_9TRYP Length = 1062 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 229/652 (35%), Positives = 350/652 (53%), Gaps = 44/652 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 +LP+ + L+ + H V ++ GETGSGKTTQ+P+ +E G G G++ TQPRR+AA Sbjct: 399 SLPIYAFRDRFLQHVDAHAVTVLVGETGSGKTTQIPQYLVEHGYGKNGVVCCTQPRRVAA 458 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 T+A R+AEE G +GY VRF D S T +K MTDG+LL E D +Y II Sbjct: 459 ETLAIRVAEEYGCRLGEEVGYTVRFRDVTSSLTCIKYMTDGMLLREALLDDSFQRYSVII 518 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHERS+N D L ++ +RP LK+I+TSAT++ E+F +FN + + GRT+P Sbjct: 519 LDEAHERSVNTDLLFAIVRNATHKRPTLKVIVTSATLEREKFCSYFNVHDVFFIEGRTFP 578 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTAD------ 308 V+ + A+ TE D L V +L +E GD+L+F++G+ EI D Sbjct: 579 VDTYFL-----AEPTE-DYLDCALKTVMKLHLEEPPGDVLVFLTGQEEIEFGGDRLFRWM 632 Query: 309 ----ALNKLNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKY 362 L+ L + ILPL A L Q+RVF+ R++VLATNVAETS+T+ + Y Sbjct: 633 ERLRGLSDLPVPDMLILPLTATLPQDVQSRVFEPTPPHCRKVVLATNVAETSITISNLSY 692 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 V+D G ++ + + +T +++L I PISQA A QR GR GR+ G C R+Y+E F + Sbjct: 693 VVDSGYSKQNVFDPKTGMEQLKIMPISQAQARQRAGRAGRIGPGKCFRMYTEIQFRQDMD 752 Query: 423 -FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 T P+I R+NL V+LQ+ A+G+ D+ A ++ P + + ++ L L A+ D Sbjct: 753 PATVPDIQRSNLFHVVLQLKAMGINDLFALDLMDPPPQETLVTALQKLRYLEALDEDGL- 811 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR--ERPMDKQQ 539 LTPLG +++ LP+DP ++ +L A GC + I S L+ Q RP D+ + Sbjct: 812 ----LTPLGGRMAHLPIDPSHSKTLLTAVDLGCSEPVLTIVSMLAAQKRGVFYRPRDQHE 867 Query: 540 ASDEKHRRFHDKESD---FLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 A+D R+FH E D LA + W G LS N C+ ++L + + E +D Sbjct: 868 AADAAKRQFHQPEGDHITLLAVYDAWVANG-----LSEN----WCKRNFLKHRMLMEARD 918 Query: 597 IYTQLRQVVKELGIPV-NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 QL +++++ + + + E+ A+ G + + D T A + Sbjct: 919 TRDQLSEMLRKRHTNIEHHNDSSLTEVRRAITAGYFFNAARRITDVAYATLAERREVYVH 978 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 P S L PPK+++ E+ TSR + R I+P W+ +A YS+P Sbjct: 979 PSSCLRDTPPKYLLYNEVQLTSREYMREILAIEPRWLVELAPAF----YSKP 1026 >UniRef50_B6H7B9 Pc16g02360 protein n=34 Tax=Leotiomyceta RepID=B6H7B9_PENCW Length = 672 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 230/654 (35%), Positives = 355/654 (54%), Gaps = 53/654 (8%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LP+++ K+++L + + V IV G+TGSGKTTQLP+ + G G +I TQPRR+AA Sbjct: 22 LPIARHKKNLLYLVEKYPVTIVVGQTGSGKTTQLPQYLDQAGWCEDGKIIAVTQPRRVAA 81 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 TVA R+AEE++ + G +GY +RF D S T +K +TDG+LL E D LL +Y I+ Sbjct: 82 TTVATRVAEEMRCKVGEEVGYSIRFEDLTSPATRIKFLTDGMLLREALVDPLLSRYSVIM 141 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------------ 243 +DEAHERSL D LLG LK++ +RP+L+II++SAT+ E F R F Sbjct: 142 VDEAHERSLGTDVLLGTLKKIRKKRPELRIIVSSATLQAEDFLRFFAGEEYQPEAEPEDL 201 Query: 244 ----APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSG 299 II + GR YPV++ + + A+D ++ +FD +QE GD+L+F++G Sbjct: 202 GGSVGRIISLEGRMYPVDILF--LDSPAEDYIERAVKTVFDI---HTQEPEGDVLLFLTG 256 Query: 300 EREIRDTADAL--NKLNLRHTEI-----LPLYARLSNSEQNRVFQ--SHSGRRIVLATNV 350 EI DTA L + H + LPLYA L+ +Q VF+ + R+++++TN+ Sbjct: 257 REEI-DTAIQLISERAATLHPKAPSLLPLPLYAGLTTEQQMYVFEPTPENTRKVIVSTNI 315 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AE S+T+ GI YVID G A++ Y+ T + L PIS+ASA QR GR GR G C R Sbjct: 316 AEASVTIDGIVYVIDSGFAKLRAYNPNTGIDTLTAVPISKASATQRAGRAGRTKPGKCFR 375 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LY++ F PE PEI R+NLA VI+Q+ ALG+ +I F F+ P I + LL Sbjct: 376 LYTQQAFEQMPEARVPEIQRSNLAPVIMQLKALGIDNIVRFDFLTPPPAELIIRALELLS 435 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 LGA+ D+ A K PLG +++++ +DP +A+++L A C+ E + I + +++Q Sbjct: 436 SLGAV--DDYAKLTK--PLGMRMAEIALDPMMAKVLLVAPSFNCLSEILTIAAMVNLQGT 491 Query: 531 RERPMDKQQASDEKHRR-FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 + S E HRR F +E D L ++N++ + K S + CR + LNY Sbjct: 492 VWVQHAGDKRSAESHRRKFAVEEGDHLTYLNVYQAFVTKGKKDS-----KWCRDNLLNYR 546 Query: 590 RVREWQDIYTQLRQVVKELGIPVNSEPA----------EYREIHIALLTGLLSHIGMKDA 639 + I QL++ ++ GI V+ + + +I L TG +H Sbjct: 547 ALLRAVSIRGQLKRYLERFGIQVDETLSSRHGAADLSKQPEQIRRCLTTGYFAHAAKMQP 606 Query: 640 DKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS-RLWGRIAARIDPEWV 692 D T + P S +F + WV+ E+++T + + R +I+ ++ Sbjct: 607 DGTFKTVSGGLTLHAHPTSLMFNRKADWVIFHEIMQTGEKTYIRDVTKIEKSYL 660 >UniRef50_B9WL64 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=7 Tax=Saccharomycetales RepID=B9WL64_CANDC Length = 1050 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 229/656 (34%), Positives = 358/656 (54%), Gaps = 52/656 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-------RGIKGLIGHTQ 129 LP + D+L IRD+QV IV GETGSGKTTQL + E G G K +I TQ Sbjct: 335 LPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGSNIDKNGEKKIIACTQ 394 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLL 188 PRR+AA +VA R++EE+ + G +GY +RF D ++ T++K MT+GILL EI D LL Sbjct: 395 PRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTNNKKTIIKYMTEGILLREILVDPLL 454 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 + Y II+DEAHERSLN D LLG K LL +R DLK+IITSAT++ RF++ F AP Sbjct: 455 INYSCIIMDEAHERSLNTDILLGLFKNLLSKRKDLKLIITSATMNANRFTKFFGAAPQFH 514 Query: 249 VSGRTYPVEVRY-RPIVEEADDTERDQLQAI------FDAVDELSQESHGDILIFMSGER 301 + GRT+PVE+ + R + + + Q+ I +A + + GDIL+FM+G+ Sbjct: 515 IPGRTFPVEIFFNRDVNMDYVEMAVKQILTIHLGRWNINATN--GNGNDGDILVFMTGQE 572 Query: 302 EIRDTADALN-KLNLRH----TEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETS 354 +I T D + KL+L +I P+Y+ + Q ++F + R++V+ATN+AETS Sbjct: 573 DIEITCDLIKEKLDLLEDPPPLDIYPIYSTMPQDLQKKIFNKMNLQRRKVVVATNIAETS 632 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LTV GIKYVID G ++ Y+ + + L + PIS A+A+QR GR GR GI RLY+E Sbjct: 633 LTVDGIKYVIDCGLVKVKVYNPKLGMDTLQMVPISLANADQRSGRAGRTGAGIAYRLYTE 692 Query: 415 -----DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 ++ +P PEI R+NL++++L + +L + DI +FPF++ P K + + L Sbjct: 693 KATDPNNMYIQP---IPEIQRSNLSNIMLLLKSLKINDINSFPFLDPPPKDLLNCSLHDL 749 Query: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVL---EAQKHGCVREAMIITSALS 526 +GA+ Q LT LG+ + Q P++P LA+++L +++ H C E + I + LS Sbjct: 750 WAIGALDNLGQ-----LTKLGQSMIQFPIEPTLAKLILLSTQSEFH-CSEEIITIVAMLS 803 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNY--LGEQQKALSSNAFRRLCRTD 584 + + RP ++ +D +F ESD L +N++N + + N C + Sbjct: 804 VPNIYNRPKERSNEADMAREKFIISESDHLTLLNIFNQWEINLNKFKGDYNKINNWCNKN 863 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSH----IGMKDAD 640 +L + +DI QL+ ++++ + + + +I L I M Sbjct: 864 FLQLKSLYRVKDIKYQLKLIMQKNKLTILKSKND-NDIRKCLCASFYQQSAKLIKMNLNG 922 Query: 641 KQEYTGARNARFSIF--PGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWV 692 + E+ R++ +F P S L +V+ EL+ T + + +DP W+ Sbjct: 923 QPEFINLRHSYMKMFLHPTSCLLDSNLSTNYVIYHELILTKKEYMNYVTTVDPIWL 978 >UniRef50_D1ZEJ8 Whole genome shotgun sequence assembly, scaffold_22 n=1 Tax=Sordaria macrospora RepID=D1ZEJ8_SORMA Length = 1177 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 232/644 (36%), Positives = 356/644 (55%), Gaps = 38/644 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLA 134 +LPV + L+AI+++QV+I+ GETGSGKTTQ+P+ E G G+ + TQPRR+A Sbjct: 274 SLPVYAYRDAFLDAIKEYQVLILVGETGSGKTTQIPQYLHEAGYTEGGMKVACTQPRRVA 333 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R+A+E+ + G +GY +RF D SD T++K MTDG+LL E+ L Y I Sbjct: 334 AMSVAARVADEMGVKVGREVGYSIRFEDCTSDKTILKYMTDGMLLREMVTSPTLEGYSAI 393 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 +IDEAHER+++ D LL +K+L RPDLK+II+SAT++ E+FS +F++API V GR + Sbjct: 394 MIDEAHERTVHTDILLALIKDLTRARPDLKLIISSATLNAEKFSTYFDDAPIFNVPGRVH 453 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALN-- 311 PV+V Y E + L+A V ++ + + G IL+F++G+ EI + + Sbjct: 454 PVDVYY------TSAPESNYLEASLVTVFQIHATQPEGGILVFLTGQEEIDKACERVEEI 507 Query: 312 --KLNLRHTEI--LPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVID 365 KL R EI LP+YA + + Q ++F+ R++V +TN+AETSLT+ GI YVID Sbjct: 508 KRKLGSRVPEIIPLPIYANMPSELQAKIFEPTPPGARKVVFSTNIAETSLTIDGIVYVID 567 Query: 366 PGTARISRYS--YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PE 422 G + + +S T L + P S+A+ANQR GR GRV G C RLY++ +LS E Sbjct: 568 CGYVKENTFSPVGTTGQSTLAVVPCSRAAANQRMGRAGRVRPGKCFRLYTKFAYLSEMDE 627 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 PEI RT+L+SV+LQ+ ALG+ D+ F F++ P + + +L LGA+ S Sbjct: 628 SPTPEIQRTSLSSVVLQLKALGIEDLLGFDFLDPPPTELLIKSLNMLYALGALN-----S 682 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS-IQDPRERPMDKQQAS 541 A +LT +GRQ+ + P +P LA+ ++ A GCV E + I S L + P DK+ + Sbjct: 683 AGQLTRVGRQMGEFPAEPMLAKALIAATTEGCVDEMLTIVSMLGEVATLFFCPKDKKVHA 742 Query: 542 DEKHRRFHDKE-SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL---NYLRVREWQDI 597 D RF K+ D L +N++N + + ++ + ++L + R R+ +D Sbjct: 743 DSARARFTVKDGGDHLTLLNVYN------QWVDADYSPIWAKENFLTQRSLTRARDVRDQ 796 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFP 656 +L V E + + I AL + + Y T N + P Sbjct: 797 LAKLCDRVLEGSTSTCGGVSNMQPILRALTAAFFLNAARLNRGGDGYRTLKNNMTVYVHP 856 Query: 657 GSGL--FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 S + PPK ++ ELV T++ + R IDP+W+ H Sbjct: 857 SSVVKGMDPPPKVIIYHELVVTTKEFVRSVIPIDPKWLTEFGGH 900 >UniRef50_UPI0001925C54 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 35, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001925C54 Length = 748 Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 223/650 (34%), Positives = 355/650 (54%), Gaps = 53/650 (8%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-RGIKGLIGHTQPRRLAA 135 LP + + +L + +Q VI++ TGSGK+TQ+P+ E G K +IG TQPRR+A Sbjct: 52 LPSFKYRNAVLYLLEKYQTVIISASTGSGKSTQIPQYLYEAGWTNEKKIIGITQPRRVAV 111 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHV-SDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 +VA+R+AEE+ T G +GY +RF D D T +K +TDG L+ E+ D LL QY + Sbjct: 112 TSVASRVAEEMGTALGREVGYSIRFEDCTDKDLTKIKFLTDGYLVREMMADPLLSQYSVL 171 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----------NA 244 ++DE HER+L D ++G LK++L +RPDL++II+SAT+D +++ + FN + Sbjct: 172 MLDEVHERTLYTDVIIGLLKKILRKRPDLRLIISSATLDADQYQKFFNIKKSVNKAEVTS 231 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREI 303 I+E+ GRT+PV++ Y + +++ D V + + S GDIL+F++G+ E+ Sbjct: 232 VILEMEGRTFPVDIFY------LQAAIPNYVKSAVDTVINIHKSYSDGDILVFLTGQDEV 285 Query: 304 RDTADALNKLNLRHTEILPLYARLSN------------SEQNRVFQSH--SGRRIVLATN 349 N L L EI L + N +EQ +VFQ + R++V++TN Sbjct: 286 E------NALQLIQNEINLLPKNIQNVLLLPLYGGLPMAEQLKVFQRAPPNTRKVVVSTN 339 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 VAE S+T+ GI YVID G ++ Y+ + + L I PIS+ASA QR GR GRV G Sbjct: 340 VAEASITISGIVYVIDSGFVKLKAYNAASGLDSLVITPISKASAAQRSGRAGRVRAGKAY 399 Query: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 RLY E +F FT PEI RTNLASVILQ+ +LG+ ++ F F+ AP + + +G+ LL Sbjct: 400 RLYPECEFDKLSLFTIPEIQRTNLASVILQLKSLGISNVLRFNFLSAPPAQLMINGIELL 459 Query: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 LGA+T + + PLG Q+++ P++P L++M+L + C EA+ + + L I++ Sbjct: 460 FALGALTEEGNLTE----PLGVQMAEFPLNPMLSKMLLCSGNFQCSEEAVTLAAMLQIEN 515 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 + + RF KE D L +N++ + K++ C +LNY Sbjct: 516 VFVAVPNMKNKVTRSKLRFAAKEGDHLTLINVYRAFIKHGKSMD------WCHKHFLNYK 569 Query: 590 RVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 + + QL ++K+ IP+ S + I +++G +++ K EY R+ Sbjct: 570 SLVRVVKVRNQLISILKQYDIPIVSCKEDDEAIRKCIISGFFANVA-KYHPSGEYRTVRD 628 Query: 650 AR-FSIFPGSGL--FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 R + P S L PPK ++ E++ TS+ + R A I W+ +A Sbjct: 629 NRSLYLHPSSVLSSITPPPKLLIFNEVLCTSKDYMRDATDIKLSWLLELA 678 >UniRef50_A4RR62 Predicted protein n=3 Tax=Mamiellales RepID=A4RR62_OSTLU Length = 724 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 244/683 (35%), Positives = 359/683 (52%), Gaps = 59/683 (8%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGH 127 P + D+LPVS+ DI A++ + V +V GETGSGKTTQ+ +I + G G + Sbjct: 12 PSTSSTDDLPVSRYANDIASAVKTNAVTVVIGETGSGKTTQIAQILLRSGVVADGSAVAV 71 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AA +VA R+AEE+ E G +GY VRF D T +K +TDG LL E+ +D Sbjct: 72 TQPRRVAAVSVAKRVAEEMGVEIGKEVGYSVRFEDRTCRLTRIKYLTDGTLLRELLEDPT 131 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L +Y +++DEAHERSL+ D L G LK+L+ R +LK++ITSAT+D E+FS +F++AP+ Sbjct: 132 LSRYSVVVLDEAHERSLHTDILFGLLKKLVSAR-ELKLVITSATLDSEKFSTYFDDAPVF 190 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDT 306 V GRT+PV++ + A + + Q AI VD GD+L+F++G+ EI Sbjct: 191 TVPGRTFPVQIAH------ATEAPKSYFQSAIETVVDVHVNTGPGDMLVFLTGQEEIEKA 244 Query: 307 ADALNKLNLRH--------TEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLT 356 A+ + ++R ++LPLYA L Q+RVF H + RRI+ ATN+AETSLT Sbjct: 245 CRAV-EAHVRSMPEGECPDVQVLPLYASLPPDMQSRVFHPHDPNVRRIIFATNIAETSLT 303 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI +VIDPG + Y T + L + PIS A QR GR GR G C RLY++D Sbjct: 304 VPGIVFVIDPGVVKQVEYDAMTGMNALKVVPISSVQAKQRAGRAGRTQAGRCYRLYTKDA 363 Query: 417 F-LSRPEFTDPEILRTNLASVILQMTALGLG--DIAAFPFVEAPDKRNIQDGVRLLEELG 473 L P T PEI RT L IL + L L D+ F F++ PD I D +R L +G Sbjct: 364 LELDMPAITRPEIQRTCLVGTILYLKTLNLKGLDVMTFDFLDPPDTALIADALRQLYFVG 423 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 AI D +A T +GR++S LP++P L+R ++EA++ CV + + + LS+ ER Sbjct: 424 AIDPDGKA-----TSIGREMSSLPLEPCLSRAMVEAKRLDCVADTATVAAMLSV----ER 474 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 Q + DFL + L +A S+ ++R Y R E Sbjct: 475 VFLGQHRDATESLHELATHEDFL--LGDHAVLLRIYQAWESSGYQRKFHQRYSLSDRGME 532 Query: 594 W-QDIYTQLRQVVKEL------GIPVNSEPAE-YREIHIALLTGLLSHIGMKDADKQEY- 644 + ++I QL V K+ S E + +L G ++ I + + Y Sbjct: 533 FAREIRKQLLGVFKDKRKSDRNDFDCFSRTDEGLNRLRQSLCAGFVTKIAHRLPNHNGYR 592 Query: 645 -TGARNARFSIFPG--------SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 G + + P GL P+W++ EL+ TSR + R +I+PEW+ Sbjct: 593 TLGENSTLCQVHPSMARQLADKDGLL---PEWIVYHELITTSRPFLRHVCKIEPEWISKQ 649 Query: 696 AQHLIKRTYSEPHWERAQGAVMA 718 + L K+ + R G V++ Sbjct: 650 RELLSKKV----NIHRLSGGVLS 668 >UniRef50_Q9DBV3 Probable ATP-dependent RNA helicase DHX34 n=23 Tax=Euteleostomi RepID=DHX34_MOUSE Length = 1145 Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 202/547 (36%), Positives = 319/547 (58%), Gaps = 25/547 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP++Q IL+ +++HQVV+VAG+TG GK+TQ+P+ + G + TQPRR+A Sbjct: 164 LPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAG---FSHVACTQPRRIACI 220 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A R+ E ++ G +GY++RF S T + +T G+LL +IQ++ L QY +I+ Sbjct: 221 SLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIV 280 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DE HER L+ DFLLG L+ LLP+RPDLK+I+ SATI+ FS +F++AP+++V GR +P+ Sbjct: 281 DEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPI 340 Query: 257 EVRYRPIVEEADDTERDQ-------LQAIFDAVD-ELSQESHGDILIFMSGEREIR---D 305 V Y+P +EAD T + +A+D + E GD+L+F+SG EI D Sbjct: 341 TVVYQP--QEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITTVLD 398 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYV 363 A A L R +LPL++ LS S+Q++VF R+ +L+TN+AETS+T+ GI++V Sbjct: 399 AAQAYASLTQRWV-VLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFV 457 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 +D G + Y + K+QRL ISQASA QRKGR GR G+C RLY+E D+ + + Sbjct: 458 VDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPY 517 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 PEI R L +++LQM ++ +GD FPF+E P +++ + L+E GA+ + E Sbjct: 518 PVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSE---- 573 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 LTP+G L+QLPVD + +M++ + I +ALS+Q P R Sbjct: 574 -ALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCAT 632 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 R + D N++N + + S N+ R+ CR + R+ E ++ Q ++ Sbjct: 633 ARRPLESDQGDPFTLFNVFNAWVQVKSERSGNS-RKWCRRRGVEEHRLYEMANLRRQFKE 691 Query: 604 VVKELGI 610 ++++ G+ Sbjct: 692 LLEDHGL 698 >UniRef50_A5DRX8 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DRX8_LODEL Length = 1141 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 227/657 (34%), Positives = 365/657 (55%), Gaps = 45/657 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR-------------GIK 122 +LP K D++ IRD+QV I+ GETGSGKTTQL + E G G+ Sbjct: 418 SLPAFAVKDDVVATIRDNQVTIIIGETGSGKTTQLTQYLYEAGLAHNADEAGQGSGLGVA 477 Query: 123 G----LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGIL 178 G +I TQPRR+AA +VA R++EE+ + G +GY VRF D S++T++K MT+GIL Sbjct: 478 GQEKKMIACTQPRRVAAMSVAKRVSEEMGVKLGAEVGYSVRFDDKTSNSTLIKYMTEGIL 537 Query: 179 LAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFS 238 L EI D LL+ Y II+DEAHERSLN D LLG K LL RR DLK+I+TSAT++ +RF+ Sbjct: 538 LREILADPLLLDYSCIIMDEAHERSLNTDILLGLFKGLLARRRDLKLIVTSATMNADRFT 597 Query: 239 RHFNNAPIIEVSGRTYPVEVRY-RPIVEEADDTERDQLQAIF--DAVDELSQESHGDILI 295 R F AP + GRT+PV+V + R + + ++ Q+ +I +L + GDIL+ Sbjct: 598 RFFGAAPQFTIPGRTFPVDVYFNRNVSMDYVESAVKQILSIHLGSMAGKLEFVNDGDILV 657 Query: 296 FMSGEREIRDTADAL-NKLNLRHT----EILPLYARLSNSEQNRVFQSH--SGRRIVLAT 348 FM+G+ +I T D L KL + ++LP+Y+ + Q ++F+ + R++V+AT Sbjct: 658 FMTGQEDIEITCDILCEKLAMLENPPPLDVLPIYSTMPPEMQKKIFRKKNLARRKVVVAT 717 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLTV GIKYVID G ++ Y+ + + L + P+S A+A+QR GR GR S G+ Sbjct: 718 NIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPVSLANADQRSGRAGRTSAGVA 777 Query: 409 IRLYSEDDFLSRPEFTD--PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 RLY+E+ S+ + PEI RTNL++ +L + +L + DI FPF++ P K + Sbjct: 778 YRLYTENATSSKCMYAQPIPEIQRTNLSNTMLLLKSLNVKDINNFPFLDPPPKDLLNCS- 836 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK--HGCVREAMIITSA 524 L +L AI D + +LT LG ++ Q P++P L++++L + + C + + I + Sbjct: 837 --LYDLWAI--DALDNYGELTKLGLEMVQFPIEPTLSKLILLSTQPEFHCSEDIVTIVAM 892 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN--AFRRLCR 582 LS+ + R ++ + SD +F +SD L +N++ K +N + C Sbjct: 893 LSVSNIFFRSKERAKESDLAREKFVVADSDHLTLLNVYTQWEVNVKKFGNNWTKLTQWCE 952 Query: 583 TDYLNYLRVREWQDIYTQLRQVVKELGIPV--NSEPAEYREIHIALLTGLLSHIGMKDAD 640 ++L + ++I QL Q++ + +P+ + + R+ A + + + + Sbjct: 953 KNFLQLKSLHRAKEIRRQLVQIMHKNKLPLLKSYHDDDVRKCLCATFYHQAAKLIKTNVN 1012 Query: 641 KQ-EYTGARNARFSIF--PGSGLFKKPP--KWVMVAELVETSRLWGRIAARIDPEWV 692 E+ R++ ++ P S L +V+ ELV TS+ + ++P W+ Sbjct: 1013 GSPEFINLRHSYMKMYLHPTSSLLDSNMGLNYVVYHELVLTSKEYMNYVTCVEPTWL 1069 >UniRef50_Q5KMH9 Pre-mRNA splicing factor, putative n=4 Tax=Fungi/Metazoa group RepID=Q5KMH9_CRYNE Length = 699 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 225/657 (34%), Positives = 355/657 (54%), Gaps = 47/657 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-RGIKGLIGHTQPRRLAA 135 LP+ + ++ +L + + VVIV G+TGSGK+TQLP+ E G G ++ TQPRR+AA Sbjct: 48 LPIYKHREKLLWCVEKYPVVIVVGQTGSGKSTQLPQYLHEAGWTGQNHVVACTQPRRVAA 107 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTI 194 +VA R+AEE+ + G +GY +RF D T +K MTDG+L E D LL +Y I Sbjct: 108 TSVATRVAEEVGSILGDEVGYTIRFEDLSHPTRTKIKYMTDGMLFRETMMDPLLSKYSVI 167 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-----------N 243 +IDEAHER D LLG LK+++ +RP+L++II+SATID E F +FN + Sbjct: 168 MIDEAHERGAYTDLLLGLLKKIMRKRPELRVIISSATIDAEDFLEYFNTNADGTDRSKDD 227 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGERE- 302 A I+ + GR +PVEV Y + E D + +Q +FD +E GDIL+F++G E Sbjct: 228 AIIVSLEGRMFPVEVCY--LKEPCADYTQAAVQTVFDL---HLREPLGDILVFLTGREEI 282 Query: 303 ---IRDTADALNKLNLRHTEI--LPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSL 355 I++ AD L L ++ LPLYA L EQ+ +F R+++ +TN+AE S+ Sbjct: 283 DQVIQEVADRLLSLPKAAPKLLALPLYATLPPEEQSLIFDPPPRDTRKVIFSTNIAEASV 342 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY--- 412 T+ GIKYV+D G +I Y+ RT + L P S ASANQR GR GR S G C RLY Sbjct: 343 TIDGIKYVVDSGFVKIKTYNPRTCMDVLTTTPCSLASANQRAGRAGRTSAGKCFRLYPAS 402 Query: 413 ---SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 + + P T PE++R++++ +LQ+ ALG+ ++A F F+ P + + L Sbjct: 403 ILPTTNPSSPMPLTTPPELVRSDISLYLLQLKALGIDNLAKFDFMSPPPSEMMIRALEFL 462 Query: 470 EELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L AI D++ +LT P+G +++++P+DP +A ++L + + C E + I + S+Q Sbjct: 463 FCLKAI--DDEG---RLTRPMGERMAEVPLDPMMAAILLNSHEFRCGEEILTIAAMTSVQ 517 Query: 529 DP--RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 + + K ++ + R+F +E D L +N +N A ++ C L Sbjct: 518 NVFITAQGGTKATMAELERRKFTAEEGDHLTLLNAYNAF-----ARYGQNNKQWCGNHRL 572 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 NY + I QL++ ++ IP+ S + + L++G + D + Sbjct: 573 NYKALSRAMSIRKQLKKYMERFRIPIVSCEGDAIRLRKCLVSGYFKNAAKMMPDGTYRSA 632 Query: 647 ARNARFSIFPGSGLFKKPPK--WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 NA + P S +F + P WV+ E+VET++ + R I+ +W+ +A H K Sbjct: 633 RENAPLHVHPSSVMFTRQPSTGWVIYHEVVETTKSFMRDLTVINEDWLVELAPHFYK 689 >UniRef50_Q6CF95 YALI0B09053p n=1 Tax=Yarrowia lipolytica RepID=Q6CF95_YARLI Length = 1077 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 217/632 (34%), Positives = 347/632 (54%), Gaps = 35/632 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP + +L+ I+ +QV IV GETGSGKTTQL + E G +G+IG TQPRR+AA Sbjct: 402 LPAFAVRDPLLQVIQSNQVTIVIGETGSGKTTQLTQYLYEAGYAERGMIGCTQPRRVAAM 461 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+++E++ G +GY +RF DH S T +K +TDGILL E D L Y +I+ Sbjct: 462 SVAQRVSQEMEVRVGQEVGYAIRFEDHTSPATKIKYLTDGILLRETLTDPTLDNYSCVIM 521 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+LN D LLG + +L +R DLK+I+TSAT++ +RFS F AP + GRTYPV Sbjct: 522 DEAHERALNTDILLGLFRTILAKRRDLKLIVTSATMNSKRFSDFFGGAPTFTIPGRTYPV 581 Query: 257 EVRYR--PIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL- 313 V + P+ DD ++ + ++ S+ S GDIL+FM+G+ +I T + L + Sbjct: 582 SVHHERAPV----DDYVAAAVKKVL-SIHVSSEVSTGDILVFMTGQEDITVTCEVLEERL 636 Query: 314 -----NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDP 366 N ILP+++++ QN++F R+ ++ATN+AETSLTV GI +V+D Sbjct: 637 QKDLDNPAPLMILPIFSQMPADLQNKIFNKAPPGVRKCIVATNIAETSLTVDGITFVVDA 696 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF--- 423 G +++ YS +T + L + PIS A A QR GR GR ++G RLY+E R E Sbjct: 697 GYSKLKVYSPKTGMDSLQVAPISVAQAVQRSGRAGRTAKGTAYRLYTE--HAEREEMYPT 754 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 PEI RTNLA+ +L + ++G+ D+ F F++ P K I + L LGA+ + Sbjct: 755 AIPEIQRTNLANTLLLLKSVGVTDLMKFAFMDPPPKDTIMASLYELWSLGAVD-----NL 809 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +T LG ++SQ P+DP L ++++++ +GC +E + + + L + RP ++QQ +D Sbjct: 810 GNITQLGMKMSQFPMDPCLGKILIKSVDYGCSKEMLSVVAMLCVPTVFYRPPERQQEADS 869 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 +F ESD L ++++ +K+ C +L+ + + ++ QL Q Sbjct: 870 AREKFFVPESDHLTLLHVYTQWLHNKKSPV------WCAKHFLHAKALEKAHEVREQLEQ 923 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN-ARFSIFPGSGLFK 662 ++ + ++S ++ + + G H + Y R + P S L+ Sbjct: 924 IMTTNKMHIDSCGTDWDLLRKCICAGFF-HQAARVHGLGSYRNLRTLVSTQLHPTSALYG 982 Query: 663 KP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 P +V+ EL+ TS+ + +DP W+ Sbjct: 983 LGYLPAFVVYHELILTSKEYMSCVTSVDPAWL 1014 >UniRef50_Q3LVV7 Putative pre-mRNA splicing factor n=1 Tax=Bigelowiella natans RepID=Q3LVV7_BIGNA Length = 779 Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 216/660 (32%), Positives = 350/660 (53%), Gaps = 79/660 (11%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LP+ +++A+ + +IV ETG+GKTTQ+PK +G G G IG TQPRR+A Sbjct: 148 NQLPIINSFFPLMKAVDLYDTLIVVAETGAGKTTQIPKYLFSMGYGRLGQIGITQPRRIA 207 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A VA R+A E+ + G +GY +RF D +S+ T +K MT+GILL EI + LL+QY + Sbjct: 208 AINVATRVALEVNSSVGLLVGYVIRFEDCISNLTKIKFMTEGILLREIINEPLLLQYSVL 267 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHERS+ D L LK+L R DLK+II SATI+ +FS+ F+ AP+ ++ G+ Y Sbjct: 268 VLDEAHERSIFSDILFSLLKDLNILRSDLKLIICSATINTNKFSKFFSYAPLFQIPGKIY 327 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES-HGDILIFMSGEREIRDTADALNKL 313 VE+ + ++E D L A+ + ++ +S GDIL+F++G+ +I + ++K Sbjct: 328 SVEIY------NSKESEIDYLDAVVRTILQIHIKSKQGDILVFLTGQEDIEIVENIISKR 381 Query: 314 N------LRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVID 365 + + E PLYA LS + QN++F + R++VL+TN+AETSLT+ GI +VID Sbjct: 382 SKLIKTLMGQLETFPLYANLSYNLQNKIFLKLPTNKRKVVLSTNIAETSLTISGITFVID 441 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD--FLSRPEF 423 G ++ + Y K + L + PI+++SA QR GR GR ++GIC RLY+ D F+ R Sbjct: 442 SGLCKLKYFDYLAKYETLIVSPIAKSSAWQRSGRAGRTAKGICFRLYTVDTYKFVLRKAI 501 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 PEI R + SVIL + LG+ DI F F++ P ++ + L LG + + Q Sbjct: 502 V-PEIQRIEIDSVILILKCLGINDINNFEFLDKPPVESVFASLEHLYILGGLNEEGQ--- 557 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 L+ LGR + + P+ P L+++++ + H CV E +II S LS++ Sbjct: 558 --LSKLGRYMCEFPLKPSLSKILIISNFHQCVEEILIICSILSLES-------------- 601 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV-REWQD------ 596 R F+ +N+L + F + ++D+L+YL V REW + Sbjct: 602 --RIFN------------YNHLNNVDQKQVLKKFTIIPKSDHLSYLNVFREWINNDFSIN 647 Query: 597 ----------IYTQLRQVVKELGIPVNSEPAEYREIHI----------ALLTGLLSHIGM 636 I + R + ++L + +N + ++I I LL+GL + Sbjct: 648 WTDRNSIDAKIMFKARFIFEQL-LGLNQKLLNSQKIGINKTNPTMIIKCLLSGLFMNAAF 706 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 + + + S+ P S L KWV+ +V T++ + + + EW+ A Sbjct: 707 FYSANCYRLLSSSTVVSVHPSSLLLNYNTKWVVFQNIVLTNKEFINVITEVKIEWLIETA 766 >UniRef50_C3YFD5 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YFD5_BRAFL Length = 666 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 212/647 (32%), Positives = 344/647 (53%), Gaps = 73/647 (11%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LPV + + IL + +Q V++ GETG GK+TQ+P+ +E G G +G +IG TQPRR+A Sbjct: 50 LPVFKYRNQILYLVERYQTVVIVGETGCGKSTQIPQYLLEAGWGAEGHVIGVTQPRRVAC 109 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVS-DNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 TVANR+AEE G +GY +RF + + T +K +TDG+L+ E+ D LL +Y + Sbjct: 110 TTVANRVAEERGAVLGHEVGYSIRFDNRFDPEATRIKFLTDGMLVREMMADPLLKKYSIL 169 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----------NA 244 ++DEAHER+L+ D ++G LK++ +R DL+II++SAT+D + F FN A Sbjct: 170 MLDEAHERTLHTDIIIGLLKKIQKKREDLRIIVSSATLDAKAFRDFFNKNVSDLESFDTA 229 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREI 303 I+ + GR +PV V YR + D +A D + ++ + E GDIL F++G+ E+ Sbjct: 230 HILSIEGRAFPVNVYYR------ESPVPDYAKATVDTIVKIHEGEKAGDILAFLTGQEEV 283 Query: 304 RDTADAL---NKLNLRHTE------ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAE 352 L N+ N RH + +LP+YA L EQ +VF+ S S R+IV+ATN+AE Sbjct: 284 DSVVSDLIEYNRTNRRHVDGRMKMKVLPMYAALPPGEQLKVFERVSQSTRKIVVATNIAE 343 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 S+T+ GI YV+D G ++ Y+ ++ V Sbjct: 344 ASITINGIVYVVDSGFVKLRAYNPQSGV-------------------------------- 371 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 +E+DF T PE+ R+N A VILQ+ ALG+ +I F F+ +P + + G+ +L L Sbjct: 372 AEEDFHKLQTNTVPEMQRSNFAFVILQLKALGISNILRFNFLSSPPAQIVIRGLEVLYAL 431 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 GA+ D + + PLG +++ P+ P A+M+LE+ K GC E + I + L +Q Sbjct: 432 GALDKDGELT----RPLGSNMAEFPLSPMFAKMLLESGKFGCSEEILTIAAVLQVQSIFV 487 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 P +++ + H +F +E D + +N++ + L +N R C+ +L+Y + Sbjct: 488 HPSNRKIEALRAHHKFAVEEGDLVTMLNVY------EAFLKNNKSSRWCQQHFLHYKGLV 541 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 I QLR+++ + +P+NS + I ++ G ++ T + Sbjct: 542 RATMIREQLRKLLVKFDVPMNSSEGDVDPICQCIVAGFFANAARFHPTGVYRTVRDDHEL 601 Query: 653 SIFPGSGLFK-KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 I P S L++ KPP WV+ E++ TS+ + R IDP W+ +A H Sbjct: 602 HIHPNSCLYREKPPGWVVFNEVLHTSKQFMRDVTVIDPSWLYELAPH 648 >UniRef50_O01598 Putative uncharacterized protein T05E8.3 n=1 Tax=Caenorhabditis elegans RepID=O01598_CAEEL Length = 856 Score = 348 bits (894), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 217/677 (32%), Positives = 351/677 (51%), Gaps = 53/677 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ +Q ++ + + +IV GETGSGK+TQ+P++C+ G G I TQPRR+AA Sbjct: 161 LPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRVAAI 220 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A+R+A E+ T GG +GY VRF + T ++ MTDGI+L + LL +Y +II Sbjct: 221 SLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVII 280 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPD----LKIIITSATIDPERFSRHFNNAPIIEVSGR 252 DEAHERSL+ D L+ L++ +R + L++II SAT+ E+F +FNNA ++ V+GR Sbjct: 281 DEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGR 340 Query: 253 TYPVEVRYRPIVEEADDTERDQLQAIFDAV-----DELSQESHGDILIFMSGEREIRDTA 307 T+P+EV + V + +++AV L++ DIL+F++G EI A Sbjct: 341 TFPIEVFH---VNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVA 397 Query: 308 DALNKLNLR---HTEIL---PLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPG 359 L +LN ++L PLYA L +Q F+ R+++++TN+AETS+T+PG Sbjct: 398 SQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPG 457 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I+ VID G + R+ ++ L + +S+A A QR GR GR + G C RLYS +DF Sbjct: 458 IRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHK 517 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI-TTD 478 PEILR NL++ L++ LG+ + ++ P+ NI + L LGAI + Sbjct: 518 FEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRPVN 577 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 S + LT +G P+ P AR++ +AQK GC+ EA+ I +A+ D + Sbjct: 578 SDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSK 637 Query: 539 QAS--DEKHRRFHDKESDFLAFVNLW----NYLGEQQKALSSNA---------------- 576 + D RRF +E D + + L + + K S+A Sbjct: 638 SDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGKANKSLEREYNQT 697 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 R+ C + +N ++ I QL+Q+ E + ++ A++ ++ AL G+ + Sbjct: 698 IRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCE 757 Query: 637 KDADKQEYTGARNARFS--IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 D + Y N + I P S L + P +++ +EL++T+ L+ ID +WV P Sbjct: 758 YDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWVRP 817 Query: 695 V--------AQHLIKRT 703 + A HL + T Sbjct: 818 LISDHKKMRANHLAETT 834 >UniRef50_B3SBV6 Putative uncharacterized protein n=2 Tax=Fungi/Metazoa group RepID=B3SBV6_TRIAD Length = 679 Score = 348 bits (893), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 217/639 (33%), Positives = 338/639 (52%), Gaps = 84/639 (13%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQ-----------LPKICMELGRGIKGLI 125 LPV + K+ IL +R +Q ++ GETGSGKTTQ +P+ C+EL G +G + Sbjct: 69 LPVWEYKEKILSTLRKNQATVLVGETGSGKTTQFKQRDVWGGSYIPQWCVELVSGRRG-V 127 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 TQPRR+AA +VA R++EE+ G +GY +RF D S NT++K MTDG+LL E D Sbjct: 128 ACTQPRRVAAMSVAQRVSEEMDVTLGQQVGYSIRFEDCTSPNTLLKYMTDGMLLREAMND 187 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 LL +Y I++DEAHER+L D L+G LKE++ R DLKI+I SAT+D +F +F AP Sbjct: 188 PLLERYSVILLDEAHERTLATDILMGLLKEIVSNRSDLKIVIMSATLDAGKFQDYFEGAP 247 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRD 305 ++E+ D + I V L E+ GD+ Sbjct: 248 LLEI----------------------EDACRRIRQEVQNLGNEA-GDV------------ 272 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS-------GRRIVLATNVAETSLTVP 358 +++PLY+ L S Q R+F+S GR+IV++TN+AETSLT+ Sbjct: 273 -------------KVIPLYSTLPPSAQQRIFESAPPSRNERIGRKIVISTNIAETSLTID 319 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 G+ +V+DPG A+ Y+ R +V+ L + PIS+AS+ QR GR GR G C RLY+E F Sbjct: 320 GVVFVVDPGFAKQKVYNPRIRVESLLVTPISKASSQQRAGRAGRTRPGKCFRLYTEKAFQ 379 Query: 419 SR-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 + E T PEILR+NL +V+L + LG+ D+ F F++ P + + LL LGA+ Sbjct: 380 TEMQENTYPEILRSNLGTVVLHLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALND 439 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 D LT LG +++ P+DP+LA+M++ + + C E + ITS LSI RP D Sbjct: 440 DGD-----LTDLGSLMAEFPLDPQLAKMLIASTGYNCSNEILSITSMLSIPQVFLRPNDA 494 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 ++A+DE +F + D L +N+++ + ++ + C ++L ++ ++ Sbjct: 495 KKAADEAKAKFGHIDGDHLTLLNVYHAYKQNKED------SQWCYDNFLQSRSLKSADNV 548 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKDADKQEYTGARNARFS 653 QL ++ + +P S R+ ++ AL+ G + T N Sbjct: 549 RQQLAGIMDKHSLPRKSTDFNSRDYYLNIRKALVAGFFMQAAHLERAGHYLTVKDNQVVH 608 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + P + L K P+WV+ E V T++ + R + P+W+ Sbjct: 609 LHPSTCLSHK-PEWVIYNEFVLTTKNYIRTVTEVKPDWL 646 >UniRef50_A5DZ49 Pre-mRNA splicing factor ATP-dependent RNA helicase PRP2 n=1 Tax=Lodderomyces elongisporus RepID=A5DZ49_LODEL Length = 900 Score = 348 bits (893), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 211/559 (37%), Positives = 335/559 (59%), Gaps = 41/559 (7%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG--RGIKGLIGHTQPRRL 133 +LPV + + + L I ++QV+IV GETGSGKTTQLP+ + G + +IG TQPRR+ Sbjct: 322 SLPVYKFRDEFLRLISENQVLIVVGETGSGKTTQLPQYLYQAGYSQNDTKIIGCTQPRRV 381 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA +VA R+A+E++ G +GY VRF D S NT +K +TDG+LL E + + Y Sbjct: 382 AATSVAQRVAQEMQEPLGEKVGYTVRFDDKSSRNTRIKYLTDGMLLREFLNNPEMDSYGA 441 Query: 194 IIIDEAHERSLNIDFLLGYLKELL-PRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGR 252 I+IDEAHER+L+ + LL LK+L R DLKIII SATI+ +FS FNNAPI+ + GR Sbjct: 442 IMIDEAHERTLSTEILLSLLKDLTNSTRSDLKIIIASATINATKFSEFFNNAPILNIPGR 501 Query: 253 TYPVEVRYRPIVEEADDTERDQLQAIFDAVDE--LSQESHGDILIFMSGEREI----RDT 306 +PV++ Y E + LQA+ + + L+Q GDIL+F++G+ EI + Sbjct: 502 RFPVKIHY------TKQPEANYLQAVMTTIFQIHLTQPLPGDILVFLTGQEEIESLEQQM 555 Query: 307 ADALNKLNLRHTE-----ILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVPG 359 +A+ KL + E + +YA L N +Q R+F+ R++VLATN+AETS+T+PG Sbjct: 556 QEAIAKLGDQLKEQGKIMVCSIYANLPNEQQQRIFEPTPPFTRKLVLATNIAETSITIPG 615 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 + YVIDPG + + ++ T ++ L + P S+A+ +QR GR GR+ G C R++++ F Sbjct: 616 VSYVIDPGYVKQTEFNPHTGMESLLVVPCSKANCDQRAGRAGRIGPGKCFRIFTKHSFDH 675 Query: 420 RPEF-TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 E T PEI R NL SV+L + +LG+ D+ FPF++ P++++I + LL +LG + Sbjct: 676 EMEMNTKPEIERINLNSVVLLLLSLGINDLIKFPFLDPPNRQSIIKSLSLLYQLGGLN-- 733 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-----PRER 533 S +LT G ++S+ P+DP A+ +L +++ G +E II + L+ P++ Sbjct: 734 ---SRGELTRTGMKMSEFPLDPTYAKCILSSERFGITKEICIIIAMLTESSNLYYIPKK- 789 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 +DK+ ++H +F DK+ D L +N++ +Q A + + C+ ++ Y ++ Sbjct: 790 -LDKEMVK-KRHEQFVDKQGDHLTLLNVY-----KQWAGTGGYSNQWCQDYFIQYKTMKR 842 Query: 594 WQDIYTQLRQVVKELGIPV 612 +DIY QL + ++GI V Sbjct: 843 VRDIYKQLIGICLKVGITV 861 >UniRef50_A2D7A5 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2D7A5_TRIVA Length = 660 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 204/631 (32%), Positives = 349/631 (55%), Gaps = 23/631 (3%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLA 134 +LP+ + K+ I+E I ++ I+ GETG GK+TQ+P+ ++ +KG + TQPRR++ Sbjct: 44 SLPIWKSKKQIIELIANNPTTILVGETGCGKSTQVPQFLVD-SFELKGCRVAVTQPRRVS 102 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A ++A R+A E E G +GY VRF + S + +K +TDG+LL EI D L Y+ + Sbjct: 103 ATSLAARVAAERNCEVGSYVGYSVRFDNKSSPKSYIKYVTDGMLLREILVDNDLSAYNVV 162 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DE HER++ D L+G L++L RR DLK+I+ SAT++ + F FN PII V GRT+ Sbjct: 163 ILDEIHERTVQTDLLIGLLRDLQARRSDLKLILMSATLNCKLFVDFFNGPPIIHVEGRTF 222 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES-HGDILIFMSGEREIRDTADAL-NK 312 V ++Y D+ + D ++A AV +L++E GD L+F++G+ EI + + L + Sbjct: 223 KVAIKY------TDEPQTDYIEATTTAVLQLNEECDKGDFLVFLTGQEEIEEVMETLKTE 276 Query: 313 LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 ++LPLYA L +Q VF R+++L+TN+AETS+T+PGIKYVID G + Sbjct: 277 ETYPPLKVLPLYAALPMYQQQEVFNPVDEGTRKVILSTNIAETSVTIPGIKYVIDSGLVK 336 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 + Y+ + ++ L + P ++A QR GR GR SEGI RL++ED F + EI R Sbjct: 337 VKTYNPVSGIEILGVTPCAKAQVVQRAGRAGRESEGIAFRLFTEDSFFDLKDQPVAEIRR 396 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 +L+SV+LQ+ ALG+ + F F+E P IQ ++ L LGA+T + L+ G Sbjct: 397 ADLSSVVLQLFALGVKNPMTFGFLERPPTEMIQASIQQLWSLGALTPQGE-----LSDDG 451 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 + ++ P++P++ +++L A + GC A+ + + +S ++ +P +K++ + H F Sbjct: 452 KVMANFPMNPKMTKILLLACQSGCGGSALTLLAMMSCENLYVQPANKRKEARNAHSIFIH 511 Query: 551 KESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI 610 + D + + L+ K + C +++ ++ + +QL ++ ++ + Sbjct: 512 ETGDHVTLIRLYEAFAATPKEKQKD----FCFEKFVSLRALQFAVSVRSQLLEIAEQQKL 567 Query: 611 PVNSEPAEYREIHI--ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWV 668 V E R + I A+ ++ + + + SI P S F K K + Sbjct: 568 NVQDADEENRFLLIRQAISIACPENVATQISGGKYKCVLDGTEISIHPSSFAFNKGMKTI 627 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 + +E V+T +L+ R + D +W + VA L Sbjct: 628 VFSERVQTKKLYARWVSASDEKWTDLVAPTL 658 >UniRef50_D1IUD7 Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IUD7_VITVI Length = 687 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 216/642 (33%), Positives = 344/642 (53%), Gaps = 70/642 (10%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL------GRGIKGLIGHTQ 129 LPV +K++ L+ ++ +Q +I+ GETGSGKTTQ+P+ +E + K +I TQ Sbjct: 63 TLPVWHQKEEFLQVLKANQSLILVGETGSGKTTQIPQFVLEAVDIETPDKRKKMMIACTQ 122 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AA +V+ R+AEE+ G +GY +RF D S T++K +TDG+LL E D LL Sbjct: 123 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE 182 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +Y II+DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +FN AP+++V Sbjct: 183 RYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKVVVMSATLEAEKFQGYFNGAPLMKV 242 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTAD 308 GR +PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI D Sbjct: 243 PGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEGAGDILVFLTGEEEIEDACK 296 Query: 309 ALNK--LNLRH----TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKY 362 ++K NL + +PLY+ L + Q ++F+ A LT Sbjct: 297 KISKEIANLGDQVGPVKAVPLYSTLPPAMQQKIFEP------------APPPLT------ 338 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS--R 420 +V+ L + PIS+ASA+QR GR GR G C RLY+E F + + Sbjct: 339 --------------EVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 384 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P+ T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L LGA+ D Sbjct: 385 PQ-TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 443 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 LT LG +S+ P+DP++++M++ + + C E + I++ LS+ + RP + Q+A Sbjct: 444 -----LTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKA 498 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +DE RF + D L +N+++ + + S C +++N ++ ++ Q Sbjct: 499 ADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPS------WCYENFVNQRALKAADNVRQQ 552 Query: 601 LRQVVKELGIPVNSEPAEYREIHI----ALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 L +++ + + S R+ +I A+L G + + T N + P Sbjct: 553 LVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHP 612 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 + L K P+WV+ E V TSR + R + EW+ VA H Sbjct: 613 SNCLDHK-PEWVIYNEYVLTSRNFIRTVTDVRGEWLVDVAPH 653 >UniRef50_Q8IX18 Probable ATP-dependent RNA helicase DHX40 n=31 Tax=Deuterostomia RepID=DHX40_HUMAN Length = 779 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 215/649 (33%), Positives = 350/649 (53%), Gaps = 40/649 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 P+ ++++ I++A+RD+ +IV G TGSGKTTQLPK E G G+IG TQPR++AA Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +VA R+AEE+K G +GY+VRF D S T +K MTDG LL I D L ++ II Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171 Query: 196 IDEAHERSLNIDFLLGYLKELLP-----RRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 +DEAHER+L D L G LK+L R+ LK+++ SAT++ + S F N PI ++ Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADA 309 GR YPV ++ ++ D +QAI ++ E GDIL+F++G+ EI + + Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291 Query: 310 LNKL-------------NLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETS 354 L ++ L ILP Y ++ +Q R+F R+ V++TN++ TS Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LT+ GI+YV+D G + ++ R + L + PIS++ A QR GR GR S G C R+YS+ Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411 Query: 415 DDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 D + P+ PEI RT+L SV+L + L + D+ FP+++ P++R I + ++ L + Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 AI + +T LG + + P+ P L V++A C + I + LS+++ R Sbjct: 472 AID-----RSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIR 526 Query: 534 PMDK--QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 P+D Q+ ++++HR K F F L + EQ K SS A C+ ++++ + Sbjct: 527 PVDPEYQKEAEQRHRELAAKAGGFNDFATL-AVIFEQCK--SSGAPASWCQKHWIHWRCL 583 Query: 592 REWQDIYTQLRQVVKEL----GIPVNS-EPAEYREIHIALLTGLLSHIGMKDADKQEYT- 645 + QLR+++++L P + E ++ + L G ++ + + T Sbjct: 584 FSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTM 643 Query: 646 GARNARFSIFPGSGLFKKPPK--WVMVAELVETSRLWGRIAARIDPEWV 692 R + I P S L ++ K W++ E++ T++++ RI I EWV Sbjct: 644 DGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWV 692 >UniRef50_Q8SQQ2 PRE-mRNA SPLICING FACTOR (DEAD box family) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQQ2_ENCCU Length = 784 Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 220/638 (34%), Positives = 344/638 (53%), Gaps = 62/638 (9%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + D++E + H+V+++ GETGSGK+TQ+PK + G G KG+IG TQPRR AA Sbjct: 106 LPIESFRDDLMEFVGKHRVIVLVGETGSGKSTQVPKYLYQEGYGDKGIIGCTQPRRAAAI 165 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A+ LK E G +GY +RF + +T ++ MT+GILL E+ D++L +Y +I+ Sbjct: 166 SLAS----TLKREMGCAVGYSIRFDSTTTQDTKIRYMTEGILLQELLADKMLRRYSVVIL 221 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+ N+D +G LK L R DL+III SATI+ ++ +F P + GR+YPV Sbjct: 222 DEAHERTTNLDISMGLLKLALKERDDLRIIIMSATIEAQKLCNYF-GCPAFNIEGRSYPV 280 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL--- 313 E RY + DD ++ I + + GDIL+F++G ++ +N Sbjct: 281 ETRYLSV--NVDDYVEWTVKKILYIHENCGE---GDILVFVTGRDDVEGVVGIVNHCIRN 335 Query: 314 --------NLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVI 364 R ++LP Y++L QNRVFQ+ R+ +++TNVAETSLT+P I YVI Sbjct: 336 KCFGEGSEGGRGLKVLPFYSQLPEEMQNRVFQAEKDVRKCIVSTNVAETSLTIPNIGYVI 395 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS----EDDFLSR 420 D G +IS YSY T + L PIS+A+A+QR GR GR G+C R+Y+ E+D L Sbjct: 396 DTGLQKISVYSYDTG-ESLVTVPISRANADQRTGRAGRTRPGVCYRMYTADTYENDMLPS 454 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P PEI RTN+ +V+L + G+ DI F FV+ P + IQ + L LGA+ Sbjct: 455 PV---PEIQRTNIHNVVLLLLKHGVHDILGFDFVDRPSEELIQGALLGLHRLGAV----- 506 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 S LT +G+++S+L +DP LARMVL A +G V E I S LS+ + R DK Sbjct: 507 CSRGLLTKVGKEMSELRLDPPLARMVLGAAGYGAVNEIASIASMLSVHEVFHRDFDKSSP 566 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ-DIYT 599 + DFL +N++N Q+ R+++ N ++V E T Sbjct: 567 -------LCHQGCDFLTLLNIFNAFIRQKN-----------RSEWCNKMKVSEHALKRAT 608 Query: 600 QLRQVV----KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS-I 654 + ++ V +E+G+P++S + +I +++ + H + + Y N R + Sbjct: 609 ETKRAVLMSLREMGVPISSTRS-LDKIQRCIISSV--HYNVARRRGKGYVCLSNFRACMV 665 Query: 655 FPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 P S L ++++ + + T + + I P+ + Sbjct: 666 HPSSVLADSYSQYIIFYKHLSTRAEYMYCCSNISPQVI 703 >UniRef50_A2DQS5 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2DQS5_TRIVA Length = 785 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 216/643 (33%), Positives = 345/643 (53%), Gaps = 33/643 (5%) Query: 70 EITYPD---NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 EI Y + +LPV + K+ +L+A+ + V++V G+TGSGK+TQ+P+ +E R + Sbjct: 140 EIDYTEVQQSLPVFKYKKTLLDALVSNHVLVVVGDTGSGKSTQIPQYLLE--RSPNESVV 197 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AA +VA R+AEE E G +GY VRF D S+ T ++ MTDG LL E D Sbjct: 198 CTQPRRVAAMSVAARVAEERHVELGFEVGYAVRFDDKTSEFTKIRYMTDGTLLREFLVDP 257 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 LL +Y T++IDEAHERS++ D LL LK+L+ RP+ ++++ SAT+D S ++ PI Sbjct: 258 LLSKYTTVMIDEAHERSISTDILLSLLKDLMQVRPEFRLVVASATLDAASMSDFYDKCPI 317 Query: 247 IEVSGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIR 304 + V GR + V++ Y P+V D E + + E DIL+F++G+ EI Sbjct: 318 LTVPGRRFTVDINYTNTPVV----DYEIAAIDTVVKIHTSTEIEQPCDILVFLTGQDEID 373 Query: 305 DTADALNKL----NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVP 358 + +N+L + + E LPLY+ L + Q+ +F+ R+++ +TN+AETSLT+ Sbjct: 374 RSVAKINELISSKVINNIEALPLYSALPSERQSLIFKPAPRGTRKVIFSTNIAETSLTID 433 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF- 417 +KYVID G + Y + L PIS++SA+QR GR GR S GIC RLY+E F Sbjct: 434 TVKYVIDCGLVKEMSYDSKNGCSSLDRVPISKSSADQRAGRAGRTSHGICYRLYTESSFE 493 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 + T PEI R + A +L + ++G+ DI F FV++P NI + E+LGA+ Sbjct: 494 FEHEQMTKPEIKRCDFAPTLLLLISMGITDIVNFNFVDSPATNNI---ISAYEQLGALQA 550 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 + LT LG Q+SQLPV P AR +L++ + GC + I S L P Sbjct: 551 LDNDG--NLTELGEQMSQLPVSPMCARAILKSFELGCSESVITICSVLESGSPLFYFSQN 608 Query: 538 QQASDEKH-RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 + H ++F+D+E D + +N++N + + + ++ C + + + + ++ Sbjct: 609 ESKDAIAHIKQFYDEEGDHIMCLNVYN------QWVDAEYSQQWCIGNKVQHRTLLNAKN 662 Query: 597 IYTQLRQVVKELG-IPVNSEPAEYRE-IHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 I QL + + L + S+ E E I A G + ++ T I Sbjct: 663 IKNQLSDICQILNFVEDESKKNETSENISHAFCMGFFLNCAQLMSNGYYQTLRGQGEVKI 722 Query: 655 FPGSGLFK-KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 P S L + ++++ EL +T+ ++ R R PEW+ +A Sbjct: 723 HPSSCLLQYTAQQYLIFYELSKTTDIFMRTLMRTKPEWLREIA 765 >UniRef50_A8XFV1 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8XFV1_CAEBR Length = 859 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 219/677 (32%), Positives = 360/677 (53%), Gaps = 45/677 (6%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 RE A E LP+ +Q ++ + + +IV GETGSGK+TQ+P++C+ G KG Sbjct: 145 REDATYEKFIRPQLPIDVVEQQLMHELASQETLIVIGETGSGKSTQVPQLCVRAGIAEKG 204 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LI T+PRR+AA ++A+R+A E+ T+ GG +GY VRF + S T ++ MTDGI+L + Sbjct: 205 LIAVTEPRRVAAVSLASRVAVEMGTDLGGTVGYHVRFENVTSHRTKIEYMTDGIVLRKAL 264 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD----LKIIITSATIDPERFSR 239 LL +Y T+IIDEAHERSL+ D L+ L++ +R L++II SAT+ ++F Sbjct: 265 VSPLLDKYSTVIIDEAHERSLHSDVLMCILRKCQAQRRSTDNPLRLIIMSATLQADKFQA 324 Query: 240 HFNNAPIIEVSGRTYPVEVRY-RPIVEEA-DDTERDQLQAIFDAVDELSQESHGDILIFM 297 +F+NA ++ VSGRT+P+E+ + P + ++ T+ I L++ DIL+F+ Sbjct: 325 YFDNAKVVLVSGRTFPIEIHHVNPKINKSFSATDYVYNTVICVKHVHLTEPKGHDILVFL 384 Query: 298 SGEREIRDTADALNKLN---LRHTEIL---PLYARLSNSEQNRVFQS--HSGRRIVLATN 349 +G EI A L +LN R + + PLYA L +Q FQ R+++++TN Sbjct: 385 TGSEEIEAVAHQLAELNGSLPREADFILPVPLYAALRPEKQREAFQKTPQGARKVIISTN 444 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AETS+T+PGI+ VID G + R+ ++ L + +S+A A QR GR GR + G C Sbjct: 445 IAETSVTIPGIRVVIDSGKVKTKRFEASNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCY 504 Query: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 RLY+ +DF PEILR NL++ L++ LG+ + +++ P+ +NI + L Sbjct: 505 RLYTREDFQKFDAENMPEILRCNLSATFLELMKLGMKNPHRLGWIDPPESQNIDAALLEL 564 Query: 470 EELGAI-TTDEQASAYKLTPLGRQLSQLPVDP------RLARMVLEAQKHGCVREAMIIT 522 LGAI + S + LT +G P+ P ++ R++ +AQK GC+ EA+ I Sbjct: 565 TSLGAIRPINSDRSKFVLTEMGDVFCMYPLSPEHARKLKVFRILFQAQKEGCIMEAIKIV 624 Query: 523 SALSIQDPRERPMD-KQQASDEKHRR-FHDKESDFLAFV-------NLWNYLGEQQKALS 573 +A+ D K A E+ RR F +E D + + + ++ L + +A + Sbjct: 625 AAMQTDALFSGGSDSKSDAEVERVRRKFETREGDHITLLKIVLTTNDFFDQLNAKTEADA 684 Query: 574 -------------SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 + A R+ C + +N ++ I QL+Q+ E + ++ A+ Sbjct: 685 RYNKSNKSLEREYNEAIRKFCNDNMINEQHLKTGSMIEDQLKQIAIEQNVKFSTCGADLS 744 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFS--IFPGSGLFKKPPKWVMVAELVETSR 678 +I A+ GL + D + Y N + I P S L + P +++ +EL++T+ Sbjct: 745 KIRKAIAVGLFLNSCEYDRQEDRYRLMINPAITVKIHPSSALSRSKPAYIVFSELMKTND 804 Query: 679 LWGRIAARIDPEWVEPV 695 L+ ID +WV P+ Sbjct: 805 LYALQVTLIDADWVRPL 821 >UniRef50_Q9FZC3 T1K7.25 protein n=12 Tax=Embryophyta RepID=Q9FZC3_ARATH Length = 726 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 220/671 (32%), Positives = 349/671 (52%), Gaps = 67/671 (9%) Query: 86 ILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAE 144 ++E ++ + ++I+ GETGSGKTTQLP+ G +G +IG TQPRR+AA TVA R+AE Sbjct: 59 LVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAE 118 Query: 145 ELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSL 204 E + + G +GY +RF D S +T +K MTDG+LL E D L +Y II+DEAH+RS+ Sbjct: 119 ECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSV 178 Query: 205 NIDFLLGYLKELLPRRPD-----------------------------------------L 223 + D LL LK++ R L Sbjct: 179 HTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRKLSPL 238 Query: 224 KIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVD 283 K+II SA++D FS +F A + V GR +PV++ Y V D L IF Sbjct: 239 KLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILY--TVHPESDYVDATLVTIFQIHF 296 Query: 284 ELSQESHGDILIFMSGEREI----RDTADALNKLNLRHTEILPL--YARLSNSEQNRVFQ 337 E E GDIL+F++G+ EI R + L + ++LPL ++ L + +Q +VF Sbjct: 297 E---EKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFA 353 Query: 338 -SHSG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 + +G R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L + P S+A Q Sbjct: 354 PAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQ 413 Query: 396 RKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 R GR GR G RLY E +F + T PEI R NL+++ILQ+ ALG+ DI F F++ Sbjct: 414 RSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFID 473 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 P + I + L LGA+ D + P+G Q+S+LP++P ++ ++ A + C+ Sbjct: 474 KPSRGAIIKALAELHSLGALADDGKLE----NPVGYQMSRLPLEPVYSKALILANQFNCL 529 Query: 516 REAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW----NYLGEQQKA 571 E +I + LS++ P +K++ + F E D L +++++ +L +++ A Sbjct: 530 EEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAA 589 Query: 572 LSSNAFRRL----CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALL 627 S N ++ C+ +Y+N ++ +DIY Q+R+ V+++G V+S + L Sbjct: 590 GSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLA 649 Query: 628 TGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 + D I P S LF+ P+ V+ EL++TS+ + + I Sbjct: 650 ASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKKYIKNLTII 709 Query: 688 DPEWVEPVAQH 698 D W+ +A H Sbjct: 710 DSLWLSELAPH 720 >UniRef50_P20095 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 n=11 Tax=Saccharomycetaceae RepID=PRP2_YEAST Length = 876 Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 226/664 (34%), Positives = 362/664 (54%), Gaps = 61/664 (9%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG--LIGHTQPRRLA 134 LPV Q K ++L+ I+ +QV+I+ GETGSGKTTQLP+ +E G +G I TQPRR+A Sbjct: 223 LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVA 282 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDT 193 A +VA R+A+E+ G +GY++RF D + N T++K MTDG+LL E D L +Y Sbjct: 283 ATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSC 342 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 I+IDEAHER+L D L+G LK++LP+RP LK++I+SAT++ ++FS F+N PI V GR Sbjct: 343 IMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRR 402 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDEL--SQESHGDILIFMSGEREIRDTADAL- 310 YPV++ Y E + + A + ++ +Q GDIL+F++G+ EI T L Sbjct: 403 YPVDIHY------TLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLE 456 Query: 311 ---NKLNLRHTE--ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYV 363 +KL R + I P+YA L +Q ++FQ + R++VLATN+AETSLT+ GI+YV Sbjct: 457 EIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYV 516 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 IDPG + + Y T + +L P S+AS +QR GR GRV G C R++++ +L E Sbjct: 517 IDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELEL 576 Query: 424 T-DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 PEI RTNL++ +L + +LG+ D+ FP ++ P ++ + L LGA+ S Sbjct: 577 MPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALN-----S 631 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKH----GCVREAMIITSALSIQDPRERP-MDK 537 +T LG+ + + P +P A+++ A H G + E + I S L E P + Sbjct: 632 KGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSML-----HETPSLFI 686 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 Q D + ESD + ++ ++N + +S R C+ + + + ++I Sbjct: 687 GQKRDAAASVLSEVESDHILYLEIFN------QWRNSKFSRSWCQDHKIQFKTMLRVRNI 740 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIA----------LLTGLLSHIGMKDADKQEYTGA 647 QL + +++G+ ++ A + +IA ++G +I + G Sbjct: 741 RNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTGYQTMGR 800 Query: 648 RNA--RFSIFPGSGLF-------KKPPKWVMVAELVETSRLWGRIAARI-DPEWVEPVAQ 697 + S+ P S LF ++P K+V+ +L+ TS+ + R I EW+ + Sbjct: 801 SSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVP 860 Query: 698 HLIK 701 + K Sbjct: 861 QIFK 864 >UniRef50_UPI000186E82E ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E82E Length = 1041 Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 201/554 (36%), Positives = 328/554 (59%), Gaps = 25/554 (4%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LPVS + +I+E+++ V+I+AG+TG GK+TQ+P+ M G G I TQPRRLA Sbjct: 123 NELPVSVYESEIVESLKRDNVLIIAGDTGCGKSTQIPQFLMRNGFGS---IACTQPRRLA 179 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 ++ +R+ E T+ IGY+VRF + +T + +T+G+L+ ++ D L YD + Sbjct: 180 CVSLCSRLKYETLTQFQNKIGYQVRFERAKNKDTKIVFLTEGLLVRQMLSDPGLSSYDVV 239 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN-APIIEVSGRT 253 I+DE HER ++ DF+LG LK L+ +R +LK+++ SATI+ FS +F+ A +IE+ GR Sbjct: 240 ILDEVHERHIHSDFVLGLLKCLITKRDNLKLVLMSATININLFSDYFDKKAKVIEIPGRL 299 Query: 254 YPVEVRYRPIVEEADDTERDQLQA-----IFDAVDELSQESHGDILIFMSGEREIRDTAD 308 +PV+V Y+P+ E+ D +R ++ A I + +DE GD+LIFMSG EI AD Sbjct: 300 FPVQVIYKPVFED-DSKKRSKVDATPYLQIMNIIDEKYHNEKGDLLIFMSGISEIMCLAD 358 Query: 309 ALNKLNLRHTE--ILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVI 364 A+N+ + +L L++ L S+Q++VF ++ V++TN+AETS+T+ GI++VI Sbjct: 359 AINEYRKKSPNWIVLMLHSSLPLSDQDKVFDYAPEGYKKCVISTNIAETSITIDGIRFVI 418 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G + Y K+QRL ISQ+SA QRKGR GR GIC R+YSE ++L+ E++ Sbjct: 419 DSGKVKEMFYDTVYKIQRLKEFWISQSSAEQRKGRAGRTGPGICYRIYSEKEYLTFEEYS 478 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI ++ L +V+LQM LGL D+ FPF+E P+K+++++ + L++ A+T DE Sbjct: 479 LPEIKKSPLDTVLLQMINLGLSDVRKFPFIEEPNKQDLENCILSLKQQRALTDDEN---- 534 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 +T +G+ L+ LPV+ + +M++ V ++++SALSI P + + Sbjct: 535 -ITEIGKTLTNLPVELTIGKMLIIGSVFCQVDTTIVLSSALSIPSPYTNEAFRNFDMENL 593 Query: 545 HRRFHDKESDFLAFVNLWN--YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 + F D L +NL+ + +++K S RR C+ L R E + Q R Sbjct: 594 RKDFESNHGDPLTILNLYREWLIIKREKEDS----RRWCKKRGLEEQRFYEMTKLNHQFR 649 Query: 603 QVVKELGIPVNSEP 616 +++ E + +EP Sbjct: 650 EILTESELLELNEP 663 >UniRef50_UPI0001792F5D PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 33 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792F5D Length = 653 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 215/647 (33%), Positives = 355/647 (54%), Gaps = 37/647 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME-LGRGIKGLIGHTQPRRLA 134 +LPV+ +K + I+ ++ +I+ GETGSGKTTQ+P+I E + R + ++ TQPRR+A Sbjct: 13 SLPVTLQKDKLCSLIQKNETLIIIGETGSGKTTQIPQIVYENILRPDEDVVV-TQPRRVA 71 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A ++A R++ E+ TE G +GY+VRF D + T +K MTDG+LL ++ L Y + Sbjct: 72 AISLAERVSYEVNTEIGDLVGYRVRFIDKTNHFTKIKFMTDGMLLRTAILEKSLSAYGCV 131 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPD----LKIIITSATIDPERFSRHFNNAPIIEVS 250 I+DEAHER++N D L G +K++ R LK+I+ SAT++ + F+ +F NA I+ + Sbjct: 132 ILDEAHERTVNTDLLFGIVKKVQRSRKHSSNPLKVIVMSATMNADLFADYFGNAQIVYLQ 191 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL 310 GR + +++ + + +D D IF E + E H D L+F++G+ EI + A A+ Sbjct: 192 GRLHDIKIFHAK--KNVEDYFHDTFVTIFQLHKE-APERH-DFLVFLTGQEEIENMALAI 247 Query: 311 NKLN----LRHTEIL---PLYARLSNSEQNRVFQS----HSGRRIVLATNVAETSLTVPG 359 +N LR+ ++ LYA L +EQ +VF S R+I+L+TN+AETS+T+ G Sbjct: 248 EHINQDPSLRNYPVIKVRTLYASLPTNEQLKVFMSLEPNEFARKIILSTNIAETSVTLTG 307 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 IKYVID G ++ + T + L +E ISQA A QR GR GR S+G C R+YS+ + Sbjct: 308 IKYVIDCGKVKVRCFHPETSMDALKVENISQAQAEQRAGRAGRESDGYCYRIYSKKQYDE 367 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 + PEILR NL +V+LQ+ A+ + D F F+ P I +L LGA Sbjct: 368 MTKDPVPEILRCNLGNVVLQILAMNM-DPHKFDFINKPSTDAIDQAYNMLGNLGATKNS- 425 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD--K 537 LT LG ++++ P+DPR ++++L + +GC+ + + I S LS + K Sbjct: 426 -----ILTELGHKMTKFPLDPRYSKIILSSVNYGCMEDIVNIVSILSTDSIFVSSLSEKK 480 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD- 596 ++ +++ H +F SD + + + + +K S+ C ++LN +R E+ D Sbjct: 481 KKQAEDAHTKFKSSVSDHIMLLKTFRSYRKVRKDSKSS----WCDDNFLN-VRNLEYADR 535 Query: 597 IYTQLRQVVKELGIPVNSEPAE-YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 QL + + L +P+ + + + LLTG ++ + DK+ T I Sbjct: 536 AREQLLDICRYLHLPIGQSCGDNFDPLRKCLLTGFFENLAYINQDKKYVTVNAKKECKIH 595 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 P S LF P V+ E++ETS+ + + ID EW+ + ++ +R Sbjct: 596 PTSTLFHSYPHCVLYTEIIETSQPYMKYITVIDKEWLVDIVPNVHQR 642 >UniRef50_UPI0000E49F9A PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 34, partial n=3 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49F9A Length = 1098 Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 199/541 (36%), Positives = 320/541 (59%), Gaps = 21/541 (3%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 NLP+++ ++ I+EA+R + VVIVAG+TG GK+TQ+P+ M G + TQPRR+A Sbjct: 225 NLPIAKYRETIVEAVRKNSVVIVAGDTGCGKSTQVPQYLMSAGFDS---VAVTQPRRIAC 281 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A R+ E E G +GY++RF + T + +T+G+LL ++Q D +L QY +I Sbjct: 282 ISLAKRVGYETLHEYGSQVGYQIRFETTKTQATKLLFLTEGLLLRQLQLDPVLSQYSVLI 341 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DE HER L+ DFLLG L+ ++ +R DLK+++ SATI+ FS +F +AP+I+V GR YP Sbjct: 342 LDEVHERHLHGDFLLGVLRCMMEQRDDLKLVLMSATININLFSNYFKDAPVIQVPGRLYP 401 Query: 256 VEVRYRPIVEEADDTERDQLQA-----IFDAVDELSQESH-GDILIFMSGEREIRDTADA 309 ++V Y PI E ++ ++L A I +D +S GD+L+F+SG EI +A Sbjct: 402 IQVEYVPIKESEQGSKSERLDARPYLRIMQRIDHKYPDSERGDLLVFLSGVSEISSVVEA 461 Query: 310 LNKLNLRHTE---ILPLYARLSNSEQNRVFQ-SHSG-RRIVLATNVAETSLTVPGIKYVI 364 K+ T +LPL++ LS +EQ++ F S G R+ +++TN+AETS+T+ G+++++ Sbjct: 462 -AKMYASQTNRWIVLPLHSSLSVAEQDKAFDISPEGVRKCIVSTNIAETSVTIDGVRFIV 520 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G + Y+ + K+Q+L IS+AS+ QRKGR GR G+C RLY EDD+ + ++ Sbjct: 521 DSGKVKEMNYNSQAKMQQLQEFWISRASSEQRKGRAGRTGPGVCFRLYGEDDYDAFQAYS 580 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI R L S++LQM ALGL FPF+EAP +I++ + L+E GA++ E Sbjct: 581 TPEIQRVPLDSLLLQMVALGLKRPREFPFIEAPPANSIENSITFLKEQGALSEKE----- 635 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 +LTP+GR LSQLPVD + +M++ + + I +ALS+Q P + + Sbjct: 636 RLTPVGRMLSQLPVDVVIGKMLIMGTIFKMIDPVLSIAAALSVQSPFTSRAHRDHDAMSA 695 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 + D +N ++ Q KA ++ R+ C+ L R E + Q +++ Sbjct: 696 RKSLESDHGDPFTLLNAYDEWI-QMKASGGSSSRKWCKRRGLEEQRFYEMSKLKKQFKEL 754 Query: 605 V 605 + Sbjct: 755 L 755 >UniRef50_C4Y8X8 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y8X8_CLAL4 Length = 881 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 229/706 (32%), Positives = 377/706 (53%), Gaps = 69/706 (9%) Query: 51 AKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQL 110 A +I+ K+ + A+ + +NLP+ Q K I++ + ++QV ++ GETGSGK+TQ+ Sbjct: 180 AFKINSGVSKLERSQKAKELLKVRENLPIYQHKDKIIDYVTNNQVTVIIGETGSGKSTQI 239 Query: 111 PKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMV 170 P+ M L K + TQPRR+AA ++A R++EE G +GY+VRFS+ S T + Sbjct: 240 PQFLMPLN---KKRVAVTQPRRVAAASLAARVSEEYGCVLGEEVGYQVRFSNITSSKTQL 296 Query: 171 KLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP--RRPDLKIIIT 228 +TDG+L+ E+ D L +Y TIIIDEAHER++ D +LG+LK+L+ +R DLKII+ Sbjct: 297 NYLTDGMLIRELMLDPKLSKYSTIIIDEAHERTVLTDLILGFLKQLISSRQRTDLKIIVM 356 Query: 229 SATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE 288 SAT++ E FS+ F+ API+ V G+ YPV Y + E ++D ++AI V E Sbjct: 357 SATLNAELFSKFFDYAPILFVEGKMYPVSRHY--LSESSEDVVDTMVKAI---VQVNMSE 411 Query: 289 SHGDILIFMSGEREIRDTADALNKLNLRHTE------ILPLYARLSNSEQNRVFQSHSG- 341 GDIL F+ G+ EI + L+ L + + LPLYA LS +Q+++F+ SG Sbjct: 412 QEGDILCFLPGQEEIDNCVTILSTLAPQLPKEAPLIVPLPLYAALSPGQQSKIFEKLSGR 471 Query: 342 -RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 R++++ATN+AETS+TV G+K+VID G ++ + ++ + L PISQASA QR GR Sbjct: 472 KRKVIIATNIAETSITVSGVKFVIDSGLRKVKVWKHQLGLSTLLTTPISQASAKQRAGRA 531 Query: 401 GRVSEGICIRLYSEDDFLSR-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459 GR S G RL+ E+ F S+ P+ + EI+R ++ IL + +G+ D+ + ++E P + Sbjct: 532 GRESAGKVFRLFPENVFHSKLPKQQESEIMRNDVILPILTLKKMGVDDLLNWTWLEHPGQ 591 Query: 460 RNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAM 519 I + L LGA+ D+ K+TPLG +++ LP+ P L+ +++ A +G +++ + Sbjct: 592 EAIISALNTLYSLGAL--DDSG---KVTPLGYKMAILPLPPALSAVLIGASDYGVLQDVI 646 Query: 520 IITSALSIQDPRERPMDKQQASDE---KHRRF---HDKESDFLAFVNLWNYLGEQQKALS 573 I S LS+ + + DE K R++ + D +A + Y + + + Sbjct: 647 DIVSCLSVDNLVLNIGGNGELRDEINYKRRQYCPLGNTSGDLIALKEYFTYFEKLHREKN 706 Query: 574 SNAFRRLCRT------DYLNYLRVREWQDIY-----------------TQLRQVVKELGI 610 + + C+ ++N L+VR Y QL+++ +L + Sbjct: 707 ISELKMWCKDLFFSYRGFINVLKVRRQLTDYMITTIKSDDSLNQNEKDAQLKKMKAQLAL 766 Query: 611 -PVNSEPAEYRE--------------IHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 N+E + E I + L G + + D+ T A SI Sbjct: 767 QSSNTESSGEEEENFLDLKQSLDIPSILKSFLKGYALNTAIGMPDRSFRTCATGQLISIH 826 Query: 656 PGSGLFKKPP-KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 P S LF K +M E V T++ +GR + I+ W++ VA H++ Sbjct: 827 PSSNLFGKSNLDAIMYIEYVYTAKSYGRNCSSIELSWLQEVAPHIL 872 >UniRef50_Q22YX8 Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22YX8_TETTH Length = 812 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 215/655 (32%), Positives = 357/655 (54%), Gaps = 51/655 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAA 135 LP+ Q KQ+IL + ++ V+V ETGSGKTT++P+ +E G I G IG +QPRR+AA Sbjct: 60 LPIVQHKQEILYCVENYSCVVVIAETGSGKTTKIPQYLVEAGYAINGKKIGVSQPRRIAA 119 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTI 194 ++ANR+A+E+ G +GY VRF D+ + T +K MTDG+L+ +I D LL +Y + Sbjct: 120 ISIANRVAQEMGCIIGQEVGYSVRFDDNCDEELTQIKYMTDGMLINQILNDPLLSEYSVL 179 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN------------ 242 +ID+ HERS+N D LLG LK++ + P LK++I+SATID E S F Sbjct: 180 MIDDIHERSINTDILLGLLKKIRRKNPQLKLVISSATIDAESISTFFQERVTDPKTNQVI 239 Query: 243 ---NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL--SQESHGDILIFM 297 + I+ + GR +PV++ Y +T R+ + E+ + + GDILIF+ Sbjct: 240 ANLTSQILYIEGRQFPVDIYY------LKETTRNYVVKAVQVTLEIIRAPDKKGDILIFL 293 Query: 298 SGEREIRDTADALNKLNLRHTE-----ILPLYARLSNSEQNRVFQSHSG--RRIVLATNV 350 +G+ EI + + K + E ILPLY+ L +Q VF+ R+I+++TN+ Sbjct: 294 TGQEEIEAFIEIIQKNFIGDAERQNLKILPLYSGLPLEDQMEVFKPSESYVRKIIVSTNI 353 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AE+S+T+ G+ YVID +I+ Y ++ + L + PIS+A+A QR GR GRV G C R Sbjct: 354 AESSITISGVVYVIDTLFHKINYYDFKRGFENLLVVPISKAAAKQRAGRAGRVQRGECYR 413 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 L ++D F+ + + PEILR +L++ ILQ+ LG+GD+ F ++ P++ + LE Sbjct: 414 LCTKDQFVQLYDNSTPEILRCDLSTFILQLKTLGVGDVTNFELLQQPNENAY---AKALE 470 Query: 471 ELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQK--HGCVREAMIITSALSI 527 +L A+ ++ LT +G ++ ++ +L ++L + K GC ++ +++ S LS+ Sbjct: 471 QLFALKVIDKYC--NLTQEIGHKICDFNLETKLGVLLLNSFKDDFGCSQQMLVLCSMLSL 528 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL---WNYLGEQQKALSSNAFRRLCRTD 584 Q ++ ++ KE D + +N+ +N+L SS A + C Sbjct: 529 QGQVFYNGFDPATILKQKKKLGAKEGDHITLINIFLAFNHLK------SSQARQGFCSDH 582 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 LN + I+ QL + VK +G+ VN+ + I AL+T ++ D Y Sbjct: 583 KLNIKSLNMAVKIHDQLCKQVKRMGLKVNNSEDDIEGILRALVTAFFMNVAQLQPDG-SY 641 Query: 645 TGARNAR-FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 RN + P S L P+WV+ +E+V +++ + R + +DP+W+ +A H Sbjct: 642 RNLRNKEILYLHPTSILNINFPQWVIYSEVVFSTKYYMREVSEVDPKWLLELASH 696 >UniRef50_C5DCP1 KLTH0B04664p n=2 Tax=Saccharomycetales RepID=C5DCP1_LACTC Length = 700 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 225/658 (34%), Positives = 359/658 (54%), Gaps = 39/658 (5%) Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME-LGRG 120 L REAA + LPV + K I+ I +QV I+ GETGSGK+TQ+P+ ME Sbjct: 49 LAREAASL-LKVRATLPVYKHKDSIMSHINKNQVTILIGETGSGKSTQIPQFLMENFPEK 107 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 I TQPRR+AA +A+R+A+E G +GY VRF + + T +K +TDG+LL Sbjct: 108 TDKRIAVTQPRRVAAINLASRVAQEYGCRLGERVGYSVRFDNKSNARTKLKYLTDGMLLR 167 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL-PRRPDLKIIITSATIDPERFSR 239 EI D+ L Y +IIDEAHER++ D +LG+LKEL+ R DLK+++ SAT+ E+FS Sbjct: 168 EIMLDKNLSDYSCVIIDEAHERTILTDLILGFLKELINSSRQDLKVVVMSATLQAEKFSE 227 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMS 298 F API+ V GR +PV+ Y + + DD + AI +L+Q E GDIL FM Sbjct: 228 FFGRAPILFVEGRKFPVQRSY--LKAQCDDV----VDAIIRCCVQLNQSEQMGDILCFMP 281 Query: 299 GEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNV 350 G+ EI L+K+ ++ LPLYA L +EQ +VF G R++V +TN+ Sbjct: 282 GQEEIDKAVAILSKVGEHLGASVPRLVALPLYAALPPAEQAKVFAPVKGFKRKVVFSTNL 341 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETS+T+ G+K+V+D G ++ + ++ + L PIS+ASA+QR GR GR S G C R Sbjct: 342 AETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISKASASQRTGRAGRESAGKCFR 401 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LY E D+ P T+PEI R+ + S IL + +G+ DI + ++E P K+ I ++ L Sbjct: 402 LYREQDYQKLPNQTEPEIARSEVTSPILMLKKVGVKDIVNWSWLENPGKQAILMALQELF 461 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 +LGA+ D+ K+T G++++ LP+ P L+ ++L+A + GC+ + I S LS+++ Sbjct: 462 QLGAL--DDSG---KITNKGQKMALLPLAPHLSSVLLKAHEDGCLLPVIDIVSCLSVENL 516 Query: 531 RERPMDKQQASDEKHRRFH-----DKESDFLAFVNLWN-YLGEQQKALSSNAFRRLC--R 582 P +Q + +RF K D + ++ Y+ + A + + LC + Sbjct: 517 LINP-SPEQRDEVNEKRFSIATRGSKYGDLVMLKEFYDAYMSLKSAAEKDDWCKELCVSK 575 Query: 583 TDYLNYLRVREWQDIYTQLRQVVKELGIPVN---SEPAEYREIHIALLTGLLSHIGMKDA 639 + N +++R + + + ++ KE + N S+ + + I L G + + Sbjct: 576 RGFKNVVKIR--AQLLSYMERLFKE-KLSDNEDESDSFDIKAIVKCFLAGFAKNTAIGMP 632 Query: 640 DKQEYTGARNARFSIFPGSGLF-KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 D+ T S+ P S LF + ++ E V T++ + R +R++ W++ VA Sbjct: 633 DRSFRTSTTGETISVHPSSMLFMDRSCPAILYTEYVFTTKGYARNVSRLELSWLQEVA 690 >UniRef50_UPI0000DB6CD8 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 33 n=2 Tax=Apocrita RepID=UPI0000DB6CD8 Length = 694 Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 226/671 (33%), Positives = 359/671 (53%), Gaps = 45/671 (6%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVI 97 K+ D+QQ + E +D+ G + L++ + +LPV + ++ +LE IR + +I Sbjct: 41 KHEDSQQNVQTE---NVDK--GNITLQQQRK-------SLPVYRLRKRLLEEIRRNSTLI 88 Query: 98 VAGETGSGKTTQLPKICMELG-RGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 V GETGSGKTTQ+P++ + G G G IG TQPRR+AA +VA R+A+E E G +GY Sbjct: 89 VIGETGSGKTTQIPQLLLSSGIAGCSGCIGVTQPRRVAAVSVARRVAQEQGVEAGKLVGY 148 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 VRF D S T +K +TDG+++ E D +L Y +I+DEAHERS+ D LLG + Sbjct: 149 CVRFEDVTSPQTRIKYLTDGMMVREAMTDEILSDYSVVILDEAHERSVQTDVLLGVARRA 208 Query: 217 LPRR-----PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTE 271 R P LK+++ SAT+D ++F+++F AP + + GR +PV++ + V+ DD Sbjct: 209 QNLRKLKNLPPLKLLVMSATMDVDKFTKYF-QAPAVYLEGRQHPVKIYH--AVKSQDDYA 265 Query: 272 RDQLQAIFDAVDELSQESHGDILIFMSGEREI-------RDTADALNKLNLRHTEILPLY 324 L F ++ DIL+F++G+ EI R A L+ ++ PLY Sbjct: 266 FSALVTAFQI--HRDNPANEDILVFLTGQEEIEAAAVSARQVAKQLDGQGYPSLKVFPLY 323 Query: 325 ARLSNSEQNRVFQ-SHSG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 + L +Q F+ S G R+++L+TNVAETS+T+ GI++VID G + + T + Sbjct: 324 SALPTHQQLEAFKPSPPGMRKLILSTNVAETSVTIGGIRHVIDTGVVKARTHHPTTGLDV 383 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTA 442 L +E +S+A A QR GR GR + G C R Y++++F E PEI R +LA V LQ+ A Sbjct: 384 LRVEKVSKAQAWQRTGRAGREAAGKCYRTYTKEEFERMKEMPVPEIQRCSLAGVALQLLA 443 Query: 443 LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502 +G+ DI F F++ P K + V LE+LGA+ + S +LT LGR +S P+DPR Sbjct: 444 IGV-DITTFDFMDKPPKEAVDVAVTCLEKLGAV----KGSPPQLTTLGRTMSLFPLDPRF 498 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562 +++L + +H C+ EA+ + S LS + P K+Q + RF E D + +N++ Sbjct: 499 TKVILASVEHQCLEEALTVVSLLSGESVFTDPPAKRQQAYVARSRFASPEGDHVTLLNVF 558 Query: 563 -NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE 621 Y +QK + C ++L++ + ++ QL + + S Sbjct: 559 RGYTNTKQKKV-------WCHDNFLHHRNLEYAVEVRHQLAALADRANLERASCGTSTDR 611 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 + ALL GL ++ D+ T + SI P S L P ++ E++ T R + Sbjct: 612 LRKALLEGLHDNLAELQRDQTYVTVSSKQPVSIHPSSTLHATKPPLILFTEVIATGRCYI 671 Query: 682 RIAARIDPEWV 692 R + ID W+ Sbjct: 672 RGLSVIDSSWL 682 >UniRef50_Q2GVT0 Putative uncharacterized protein n=2 Tax=Sordariomyceta RepID=Q2GVT0_CHAGB Length = 626 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 217/660 (32%), Positives = 341/660 (51%), Gaps = 87/660 (13%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LP+++ ++ +L I V IV G+TGSGK+TQ+P+ G G +IG TQPRR+AA Sbjct: 21 LPIAKHRKSLLYLIETSPVTIVVGQTGSGKSTQIPQFLERAGWCADGKIIGITQPRRVAA 80 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 TVA R+AEE + G +GY +RF D S+ T +K +TDG+L+ E D LL +Y I+ Sbjct: 81 TTVAIRVAEEFGCDVGKEVGYSIRFEDATSETTRIKFLTDGLLIREALVDPLLSRYSVIM 140 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-------------- 241 +DEAHERS++ D LLG LK++ +RPDL+III+SAT+ E F F Sbjct: 141 VDEAHERSISSDILLGLLKKIRKKRPDLRIIISSATLQAEEFRNFFSEPKEETPNGKENG 200 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQL-QAIFDAVDELSQESHGDILIFMSGE 300 +NA I+ + GRTYP+++ Y D D L +A+ +D + E GDILI Sbjct: 201 DNASIVSLEGRTYPIDILY------LDSPAEDYLDKAVSTVIDIHTNEPKGDILI----- 249 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 ++ + S + +S + R+++ +TN++E S+T+ GI Sbjct: 250 ------------------------SKCTCSRK----RSENFRKVIFSTNISEASVTIDGI 281 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 YV+D G ++ Y +T ++ L P+S+ASA QR GR GR G C RLY+E+ + S Sbjct: 282 VYVVDSGFVKLRAYDPKTGIESLTATPLSKASAAQRAGRAGRTKPGKCFRLYTEEAYQSL 341 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 PE PEI R+NLA +LQ+ ALG+ ++ F F+ P + G+ LL LGA+ D+ Sbjct: 342 PEANIPEIQRSNLAPFVLQLKALGIDNVLRFDFLAPPPAELMVRGLELLYSLGAL--DDY 399 Query: 481 ASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS------IQDPRER 533 A KLT PLG ++++L V+P +A+ +L AQ GC+ E + I + S IQ E+ Sbjct: 400 A---KLTRPLGLRMAELAVEPMMAKTLLSAQSFGCLSEILTIAAMTSLGGNIWIQHEGEK 456 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 + ++ R+F +E D L +N++ + + S R C + LN+ + Sbjct: 457 -----KKTESAKRKFAAEEGDQLTLLNVYQAFVTKGRKES-----RFCHENLLNFKLMAR 506 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEY---------REIHIALLTGLLSHIGMKDADKQEY 644 I QL++ ++ G+ V+ A + +I L G +H D Sbjct: 507 AVSIRAQLKRYLERFGLNVDESLAAHSTSTASNKAEQIQRCLTAGYFAHAARMQPDGTFR 566 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVET-SRLWGRIAARIDPEWVEPVAQHLIKRT 703 + P S +F + +WV+ E++ET ++ + R RI+ W+ A K T Sbjct: 567 NVSGTTVLHAHPSSIMFNRKAEWVIFHEVMETGNKTFIRDITRIEKSWLLEYAPEFYKTT 626 >UniRef50_A4RXZ6 Predicted protein n=7 Tax=Eukaryota RepID=A4RXZ6_OSTLU Length = 713 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 222/680 (32%), Positives = 351/680 (51%), Gaps = 71/680 (10%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-RGIKGLIGHTQPRRLAA 135 LP++ +++ + HQ ++ G TG GKTTQ+P+ + G G + TQPRR+AA Sbjct: 53 LPIAAHADELMYCVEKHQTTVIVGHTGCGKTTQIPQYLRDGGWCGGGATVAVTQPRRVAA 112 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVS-DNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 +TVA R+AEE+ G +GY +RF D + T +K TDG LL E+ +D LL +Y + Sbjct: 113 QTVAQRVAEEVGCVIGDTVGYAIRFEDVCTPGKTEIKFCTDGALLRELAEDPLLTKYSVV 172 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA---------- 244 I+DEAHER+L D LLG LK++ R DL++I++SATI E F+ F+ + Sbjct: 173 IVDEAHERTLATDVLLGLLKKVQRARRDLRLIVSSATIQAESFAAFFDASGEDDDGDGPS 232 Query: 245 --PII-EVSGRTYPVEVRYRPIVEEADDTERDQ-LQAIFDAVDELSQESHGDILIFMSGE 300 PII V GR + V + Y D+ D L A+ A++ E GDILIF++GE Sbjct: 233 RKPIIMSVEGRAHGVLIHY------LDEPTGDYVLSAVETALEVHRNEGPGDILIFLTGE 286 Query: 301 REIRDTADALN------KLNLRHTE------ILPLYARLSNSEQNRVFQS--HSGRRIVL 346 EI D + L K + R + + PLYA L+ + Q F+ R++V+ Sbjct: 287 GEIDDAVNLLEEEAREMKRDPRRSHDALDLVVCPLYAGLNPAAQLEAFRPPRRGARKVVV 346 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATNVAETS+T+ G+ YVID A+ + ++ L + P S+AS NQR GR GRV G Sbjct: 347 ATNVAETSVTIEGVVYVIDSCFAKQKAFDPERGMESLFVAPASKASTNQRAGRAGRVRPG 406 Query: 407 ICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RL +E D+ S + T PEI+R++LAS +LQ+ A+G+ +I F +V P N+ + Sbjct: 407 KCFRLCTEIDYRSLADVTAPEIVRSDLASTVLQIKAMGIDNIMNFEWVSPPPAANMIKAL 466 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 LL L A+ D + + +PLG L+++P++P+L +M+L + + GCVREA+ + + + Sbjct: 467 ELLYALRALDDDAKLT----SPLGVHLAEIPLEPQLGKMLLVSGEMGCVREALTVAAYMQ 522 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGE--QQKALSSNAFRRLCRTD 584 +Q +++ DE RF +E D + +N+ + + Q +SN + Sbjct: 523 VQSLWVTHRGQKKRLDEMRDRFAVEEGDAVMMLNIHDAYCDARNQAKFASN--------N 574 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA-EYREIHIALLTGLLSHIGMKDADKQE 643 LN+ + D+ +QL++ + LG+ NS + I A+ G ++ A Sbjct: 575 MLNHRALLRAGDVRSQLKKHLARLGVVTNSSCGDDTVPIRRAIAAGFFANA----ATLAP 630 Query: 644 YTGARNA----------------RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 Y G + I P S LF+ P+ V V T R + R + Sbjct: 631 YGGGPDGSVFHSLRAMSARARARELRIHPSSALFRSRPQCVAYCSAVRTDREYMRDVTVV 690 Query: 688 DPEWVEPVAQHLIKRTYSEP 707 + +W+ +A H + + P Sbjct: 691 EADWLRELAPHFYRAVSANP 710 >UniRef50_D0NMK0 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NMK0_PHYIN Length = 912 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 230/701 (32%), Positives = 367/701 (52%), Gaps = 94/701 (13%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPK---ICMELGRGIKG------L 124 P LP + +++IL+A+ DHQVV+ GETGSGKTTQLP+ +C G Sbjct: 152 PTPLPALEHREEILQALNDHQVVVCVGETGSGKTTQLPQFLHVCGAYTSSKGGGDEKSQC 211 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGG--CIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 I TQPRR+A +VA R+AEE+ T GG +GY +RF S NT +K +TDG+L+ E Sbjct: 212 IAITQPRRVATVSVAQRVAEEMNTRVGGDGVVGYSIRFESRCSVNTKLKFLTDGVLVREC 271 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 D LL +Y +++DEAHERS++ D LLG LK++ RRP+ +++ITSAT+D ERF+ F Sbjct: 272 LSDPLLQKYSVVMLDEAHERSVHTDLLLGLLKQVTKRRPEFRVLITSATLDAERFAEFFG 331 Query: 243 NA------------PIIEVSGRTYPVEV---RYRPIVEEADDTERDQLQAIFDAVDELSQ 287 + PI+++ GR +PV++ + R I+ R L A E + Sbjct: 332 ESIGKKSKKKVKPCPIVKIPGRVFPVDIFHSKQRQIM-----GHRGPLSTYVRAAVETTM 386 Query: 288 ESH-----GDILIFMSGEREIRDTAD---ALNKLNLRHTE-----ILPLYARLSNSEQNR 334 + H G IL+F++G+REI D AL++ R ++ +LPLY L Q Sbjct: 387 QVHNSEEPGHILVFLTGQREIEDACAQMRALHREQERRSDGMELRVLPLYGALQGQRQRE 446 Query: 335 VFQSHSG---RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 +F + S R++++ATN+AETSLT+ G++YV+D G + Y+ +++ L + PIS+ Sbjct: 447 IFDAVSVSRVRKVIVATNIAETSLTIDGVRYVVDCGFTKQKVYNPVQQMESLVVVPISKV 506 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAF 451 SA QR GR GR + G C RLY++ + + T PEI RTNLA+ +L + LG+ D+ F Sbjct: 507 SAQQRAGRAGRTAPGKCYRLYNKTSYEEMAQETVPEIQRTNLANTVLYLKLLGVQDVIGF 566 Query: 452 PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK 511 P+++ PD+ ++ D ++ L LGA+ +A+A LG+ ++ P++P+L+R ++E+ Sbjct: 567 PYLDPPDEDSLLDALKQLYVLGALDATGEATA-----LGKLMAVFPLEPKLSRALVESLL 621 Query: 512 HGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDF------LAFVNLWNYL 565 C RE + + LS+++ +D QQ K+R D+ D+ L L + Sbjct: 622 LDCSREMTQVVAMLSVENVL---IDAQQNKKRKNRDGSDEGEDWEQNMLTLREDGLLHED 678 Query: 566 GEQ-----------QKALSSNAFR----RLCRTDYLNYLRVREWQDIYTQLRQVVKELGI 610 G+Q KA S+ R R C L + + I QLR ++ L Sbjct: 679 GDQLTYRLLLKAFESKARSAQGRRRDVERWCDDRRLRFRALTMAGSIVKQLRDILDTLSR 738 Query: 611 ----PVNSEPAEYREIHI------ALLTGLLSHIGMKDADKQEY------TGARNARFSI 654 V E + R+ + +L G + + + Y G + A Sbjct: 739 RDVEAVKGEKDDRRDASLDDRLRQSLCAGFFMNAARRCTMETVYRLVNHDDGKKVAHLVQ 798 Query: 655 F-PGSGL-FKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 F P S + + PP++ + ELV TS+ + R A ++ W++ Sbjct: 799 FHPLSVMCYTAPPEFCVYQELVVTSKPFMRGALAVERRWLD 839 >UniRef50_C4GIA8 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIA8_9NEIS Length = 1410 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 169/373 (45%), Positives = 238/373 (63%), Gaps = 46/373 (12%) Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 Y+LT LG Q+++LP+DP++AR++L A+KH C+ E ++I SALSIQDPRERP++ + A+ + Sbjct: 42 YRLTKLGEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAK 101 Query: 544 KHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 H RF DK+SDFLA++N+W+ + E+ K LS+ + CR +L++LR+REW++++ QL Sbjct: 102 AHERFTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLT 161 Query: 603 QVVKELGIPVN--------------------------------------------SEPAE 618 Q E+G+ ++ A Sbjct: 162 QTAIEMGLTTKEAAFRRPPEVRQLTSSENAGDQDLSAKLKQKQLDKKQHRTQIRAAKEAG 221 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 Y +IH ALLTGL++++GMK D +YTGAR +RF +FP S LFK PKWVM AEL ET+R Sbjct: 222 YEQIHRALLTGLIANVGMKSPDGNDYTGARGSRFHLFPASALFKSKPKWVMAAELTETTR 281 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYS 738 L+ R A I PEW+E A HL++ Y EPHWE+ +G V+A+E+VT+YGL ++ R V Y Sbjct: 282 LYARDVAAIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVAYG 341 Query: 739 QIDPALCRELFIRHALVEGDWQTRHA-FFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 +I PA RE+FIR ALV + + +A FF N KL EV ELEHKSRR+D+LVDDE LFE Sbjct: 342 RIAPAEAREIFIRSALVAQEMGSFNAPFFVHNQKLIREVAELEHKSRRQDVLVDDEILFE 401 Query: 798 FYDQRISHDVISA 810 FYD R+ V + Sbjct: 402 FYDARLPKTVFKS 414 Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 141/495 (28%), Positives = 245/495 (49%), Gaps = 15/495 (3%) Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 R F +W K R+ P LL + L++ A I++ +P W + K +LSY+FEP Sbjct: 923 RTFAAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFPKHWQTADGKFKLSYRFEPHHP 982 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 DGVT+ +PL +LN++ + EW +PG+ RE + IK+LPK +RR VP P + FL Sbjct: 983 LDGVTLTLPLTVLNRISPAALEWLVPGMIREKIQLQIKALPKQIRRICVPVPEFITQFLS 1042 Query: 931 RVKPLELPLLDSLERELRRMTG-----VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 + P+L L + + + G +++++W ++P+H R++DD ++L Sbjct: 1043 QNPDRNAPILPQLAQAIAKTAGDIRILEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAM 1102 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 GR L ++ L GK T E+ + W G LPES + RG ++ + L Sbjct: 1103 GRDLIQIQQQL-GKAAATTFRDNTQEFERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQ 1161 Query: 1046 DERDS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 E+D +A++LFD +QA G+ L+ L + +K L++ + + + + Sbjct: 1162 KEKDGRIALRLFDTSAAAEQAHRLGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLK-HIN 1220 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 L DD D+ E+ F ++ R+ L +++ +++ A Sbjct: 1221 ADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYA 1280 Query: 1165 NINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA 1224 +N +L G+ +T + + ++ L+ GF T + + YL+A+ RLEK + Sbjct: 1281 ELNGKL-GKHPLTHLM-----RQRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYS 1334 Query: 1225 VDPHRDRAQMLKVENVQQAWQQWINKLPPARRE-DEDVKEIRWMIEELRVSYFAQQLGTP 1283 +P RD A+ ++ ++Q WQ + L + +D+ +WMIEELRVS FAQ+L TP Sbjct: 1335 GNPARDAAREADIQELEQMWQDKVQSLLKQNQPVSDDLAAFKWMIEELRVSLFAQELKTP 1394 Query: 1284 YPISDKRILQAMEQI 1298 YP+S KR+ + E + Sbjct: 1395 YPVSVKRLWKEWEGV 1409 >UniRef50_D0A429 Pre-mRNA splicing factor ATP-dependent RNA helicase, putative n=2 Tax=Trypanosoma brucei RepID=D0A429_TRYBG Length = 754 Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 203/552 (36%), Positives = 316/552 (57%), Gaps = 31/552 (5%) Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME--LGRGIKGLI 125 RP++ +LPV++ + I+ IR H V++ GETGSGKTTQ+P+ + + +G G++ Sbjct: 71 RPQV----HLPVTEARAAIVRMIRRHNAVVIVGETGSGKTTQIPQYVWDDIVSKGDGGIV 126 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AA ++A +A++ + GG + Y VRF D + NT +K MTDGILL EIQ D Sbjct: 127 GCTQPRRVAAVSIARHVAQQRGGKVGGEVAYAVRFDDTCTKNTKIKFMTDGILLREIQTD 186 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNA 244 L Y +I+DEAHER+L+ D L G LK++ RR + L I+I SAT++ E FS+ + +A Sbjct: 187 PDLTHYRCLILDEAHERTLHGDVLFGLLKDIARRRKNTLSIVIMSATLNEEHFSKFWWDA 246 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREI 303 P+ + GRT+PV + Y + +AD E A A+ ++ Q E GD+L F++G EI Sbjct: 247 PVGVIHGRTFPVTI-YHTVEPQADYVE-----AAVSALLQIHQREEPGDVLCFLTGREEI 300 Query: 304 RDTADAL-NKLNLRHTEI-----LPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSL 355 D L ++ L +I LPLY+ + +Q VF R+I++ATN+AETS+ Sbjct: 301 EDAKRMLEQRMKLLPNDIGDFVVLPLYSAMPYEQQLVVFDPAPPGKRKIIIATNIAETSI 360 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TV GIKYV+D G + Y+ +T ++ L +S+A A QR GR GRV+ G C RLY+ Sbjct: 361 TVEGIKYVVDSGVVKAKHYNSKTGMEVLAEVDVSRAQATQRAGRAGRVAAGKCFRLYTAQ 420 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 F S E T PEI R +L SV+LQM +L + IA F F++AP+ + L L A+ Sbjct: 421 AFESLHENTVPEIQRCSLISVVLQMKSLNIDRIADFEFMDAPNPHALTKAEETLMLLNAL 480 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 ++ +TPLG++L+ P++P A ++L + G REA+I + S ++ Sbjct: 481 DSEG-----CVTPLGKRLTDFPIEPAAAMVLLAGKALGVEREAVIAIAMTSTENLFVTSR 535 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 D ++ +D F D V+++ K + + C T+ ++Y ++ + Q Sbjct: 536 DIKERADRCKGAFAKSAGDHATLVSIYQAFKHSPK----DQRKLWCETNAISYRQMLKVQ 591 Query: 596 DIYTQLRQVVKE 607 D+ TQL ++ E Sbjct: 592 DVITQLMAILAE 603 >UniRef50_Q4E099 ATP-dependent DEAD/H RNA helicase, putative n=5 Tax=Trypanosoma RepID=Q4E099_TRYCR Length = 887 Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 211/623 (33%), Positives = 331/623 (53%), Gaps = 77/623 (12%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME--LGRGIKGLIGH------ 127 +LP+ ++ +LE IR + VVI+ GETGSGKTTQL + E L R L Sbjct: 168 SLPIYHSREALLEIIRKNTVVIIVGETGSGKTTQLLQYLYEENLCRTPPCLTEGGDGGGK 227 Query: 128 ---------------------TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD 166 TQPRR+AA +VA R+A+E+ T G +GYKVRF + + Sbjct: 228 GKEEKEGEEEEGTSEEKRFICTQPRRIAAISVAERVAQEMNTRCGSIVGYKVRFDEKLGP 287 Query: 167 NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII 226 T + +TDG++L E+ D L I++DEAHERS+N D LLG LK++ R LK+I Sbjct: 288 TTRLLFVTDGMMLKELVGDPELRTVSAIMVDEAHERSINTDILLGLLKDITRRNKQLKVI 347 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDE 284 + SATI+ E+FS F+ API + GRT+PV+V Y P+ + T L + A Sbjct: 348 VASATINAEKFSSFFDGAPIFTIKGRTFPVDVSYLTEPMADYVSATAESVL--LLHATKP 405 Query: 285 LSQESHGDILIFMSGEREIRDTADALNK------LNLRHTEILPLYARLSNSEQNRVFQ- 337 L GDIL+F+ G+ +I + A A+ + LR +LP+YA L EQ R+++ Sbjct: 406 LP----GDILVFLPGQEDIENCAAAIREGIANSGGQLRPLMVLPIYASLPPREQRRIYEV 461 Query: 338 -SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 + R++V+ATN+AETS+T+ G+ YV+D G + + Y+Y++ V+ L + PISQASA QR Sbjct: 462 PPPTTRKVVIATNIAETSITIDGVVYVVDCGLCKQNYYNYQSMVEELRVLPISQASAKQR 521 Query: 397 KGRCGRVSEGICIRLYSEDDFLSR-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 GR GR +G C RLY+ F + P+ T PEI R+ ++SV+LQ+ ALG+ ++ F F++ Sbjct: 522 TGRAGRTQKGECYRLYTAYTFRNELPQETVPEIQRSCMSSVVLQLKALGIDNLLQFEFID 581 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 AP +++ + L LGAI + +LT GR++++ P+DP L++ +L C+ Sbjct: 582 APSTASLERALDHLYLLGAIKPNG-----RLTLTGRRMAEFPLDPSLSKCILRGSALRCL 636 Query: 516 REAMIITSALSI-------QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL---WNYL 565 R I + L++ +DP+ER + + F D + +V L W Sbjct: 637 RHMAIAVAMLTLDSVFVVSRDPKERA----SIASARDVLFSAGNGDVMGYVRLMEEWMRA 692 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YRE 621 G + C++ +N + + +D+ Q+ + LG+ + S E Sbjct: 693 GP--------SMHEFCQSHSVNAKALLQARDVLDQILNTCERLGLDLPSGEEETSLSMEN 744 Query: 622 IHIALLTGLLSHIGMKDADKQEY 644 ALL G ++ +AD++ Y Sbjct: 745 FTKALLAGFFMNVAKLNADRRTY 767 >UniRef50_A5DQ95 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DQ95_PICGU Length = 1084 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 218/649 (33%), Positives = 352/649 (54%), Gaps = 43/649 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-------RGIKGLIGHT 128 +LP + ++L I ++QV +V GETGSGKTTQL + +E G G + +IG T Sbjct: 382 SLPAFAVRHELLRTIAENQVTVVIGETGSGKTTQLTQFLLEDGFGSNLAKNGERLMIGCT 441 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS-DNTMVKLMTDGILLAEIQQDRL 187 QPRR+AA +VA R++EE + G +GY +RF D + + T++K MT+G+LL EI D Sbjct: 442 QPRRVAAMSVAKRVSEEYGCKLGEEVGYSIRFEDVTTKEKTIIKYMTEGVLLREILMDAN 501 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L Y II+DEAHERSL+ D LLG + L+ RR DLK+IITSAT++ ERF F + P Sbjct: 502 LEHYSCIIMDEAHERSLSTDVLLGLFRNLIRRRKDLKLIITSATMNAERFMNFFGDVPQF 561 Query: 248 EVSGRTYPVEVRY-RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDT 306 + GRT+PV+ + + + D Q+ I + + GDIL+FM+G+ +I T Sbjct: 562 TIPGRTFPVDTLFSKSTCSDYVDAAVKQVMTIHLQNYSKYKRNDGDILVFMTGQEDIEMT 621 Query: 307 ADAL-NKLNLRHT----EILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPG 359 + + KL L ++ P+Y+ + Q ++F S + R++V+ATN+AETSLTV G Sbjct: 622 CELVREKLALLDDPPPLDVYPIYSTMPADLQRKIFDKPSETRRKVVVATNIAETSLTVDG 681 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS-----E 414 IKYV+D G ++ Y+ + + L + PIS A+A QR GR GR G+ RLY+ E Sbjct: 682 IKYVVDTGLVKLKVYNPKLGMDTLQVVPISLANAQQRSGRAGRTGPGLAYRLYTERAIGE 741 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 D +P PEI RTNL +V+L + +L + D+ FPF+++P + + + L + A Sbjct: 742 DSMYIQP---IPEIQRTNLTNVMLLLKSLKVEDVTKFPFLDSPPTDLLSNSLYDLWIMEA 798 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK--HGCVREAMIITSALSIQDPRE 532 + + LT LG + P++ L++++ + + C E + I S LS+ Sbjct: 799 LD-----NCGNLTSLGHNMMVFPIEATLSKLIFLSCRPQFSCSSEIVTIVSMLSVPSVFF 853 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRV 591 RP ++ Q SD RF ESD L +N++N Y ++ K + A+ C ++L++ + Sbjct: 854 RPKERAQESDAARERFFVAESDHLTLLNVYNQYETQRSKGRKTAAW---CSKNFLHHKSL 910 Query: 592 REWQDIYTQLRQVVKELGIPV--NSEPAEYREIHIALLTGLLSHIGMKDADKQE-YTGAR 648 +DI QL ++K+ +P+ ++ R+ A+ + + D +K YT R Sbjct: 911 SRARDIRNQLILIMKKNKLPILKSTNNDTIRKCLCAVYFHQSATLAKTDFNKGSVYTHLR 970 Query: 649 NARFS--IFPGSGL---FKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + + + P S L + V+ EL+ T++ + +DP W+ Sbjct: 971 QSYMNMHLHPTSALNSGAEAMASHVIYHELILTTKEYMSCVTVVDPVWL 1019 >UniRef50_A2DDS9 Helicase, putative n=2 Tax=Trichomonas vaginalis RepID=A2DDS9_TRIVA Length = 740 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 229/647 (35%), Positives = 352/647 (54%), Gaps = 51/647 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR-GIKGLIGHTQPRRLAA 135 LPV ++K +I+EA+R+ +V I+ G TGSGKTTQ+P+ +E I TQPRR+AA Sbjct: 68 LPVYERKDEIIEAVRNSKVTIIEGSTGSGKTTQIPRFLLEANIIDPSQKIVCTQPRRVAA 127 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 VA+R+A+E+ E G +GY VRF + T + MTDG+L+ E D + +Y II Sbjct: 128 INVASRVADEMDIELGAEVGYCVRFDAKETSKTRLTYMTDGLLMREFVIDPNVTKYGIII 187 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN---------API 246 IDEAHER++N D ++G LK L+ +R DLK+++ SAT++ +F R F+N P Sbjct: 188 IDEAHERTINSDIIIGLLKRLVNKRDDLKVVVMSATLEATKFQRFFDNITDDSEPCVTPH 247 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDT 306 I V GR + V Y E A + +A+ +D + GDIL+F++GE EI T Sbjct: 248 IVVPGRLHKVVKVY---TEAAVPNYLN--EAVSRTLDIHFNQPEGDILLFLTGEEEIEST 302 Query: 307 ADALNKLNLRHTE-------ILPLYARLSNSEQNRVFQSH---SGRRIVLATNVAETSLT 356 D L T +LPLYA L EQ +VF+ + R+I+++TN+AETS+T Sbjct: 303 CDRLRAEISGQTHSTGISAYVLPLYASLPPQEQAKVFKPAKYPNTRKIIVSTNIAETSVT 362 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + G+ YVIDPG + + Y+ ++ L + PIS+A+A QR GR GR GIC RLY+++ Sbjct: 363 IDGVVYVIDPGMVKQNTYNPERRMSSLLVVPISKAAAVQRAGRAGRTRRGICYRLYTQET 422 Query: 417 FLSR-PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 F E T PEI R++LASV+L M A G+ DI FPF++ P+ + ++ + L LGA+ Sbjct: 423 FEKELQEQTTPEIQRSDLASVLLLMLAAGISDIMHFPFIDPPEYKLVKSSIEELYFLGAV 482 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ-DPRERP 534 D Q + LT GR +S +P++P+LA ++ ++ C E I + LS Q P RP Sbjct: 483 --DIQGN---LTEKGRLMSLIPIEPKLAAALISSKDFNCTVEMATIVAMLSEQGQPFMRP 537 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 + + +D HR F SD ++ + +N + + + C YLNY + Sbjct: 538 VKESAMADAAHRPFKCGFSDHISLLRCFN-------EFAKDPSKNFCNQHYLNYRMLDRA 590 Query: 595 QDIYTQLRQVVKELGIPVNS----EPAEYREIHI--ALLTGLLSHIGMKDADKQEY---T 645 QL ++++ GI S + + E HI ALL G+ + + ++Y T Sbjct: 591 YKSRQQLLSLLRKNGIEAVSIYDDKECQNPEKHIIHALLMGMFMQTCVYNPPTKQYSFMT 650 Query: 646 GARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 G + A I P S + + P W++ E V T+ + R + I+ W+ Sbjct: 651 GQKEA--DIHPSSSI-RSIPTWLIYTEYVFTNSEFIRGCSEIEDSWI 694 >UniRef50_A8PRC9 DEAH, putative n=1 Tax=Brugia malayi RepID=A8PRC9_BRUMA Length = 681 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 212/638 (33%), Positives = 330/638 (51%), Gaps = 29/638 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LPV + E IR + + ++ GETGSGK+TQ+P+IC G GL+ TQPRR+AA Sbjct: 28 LPVDGVHLQLAEVIRQNGISVIVGETGSGKSTQIPQICYNEGLIGSGLLAVTQPRRVAAI 87 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 T+A R+A E+ G + YKVRF + SD T + TDGI L E D LL Y +I+ Sbjct: 88 TLAKRVALEMNANLGEVVAYKVRFENTTSDETKIVYGTDGIFLRETFYDSLLTPYSIVIV 147 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPD---------LKIIITSATIDPERFSRHFNNAPII 247 DEAHERS++ D LL LK +R L ++I SAT++ FS +F+NAP+ Sbjct: 148 DEAHERSVHTDILLYLLKLCYKQRLGTSNPLKLRFLLVVIMSATLETNVFSEYFDNAPVY 207 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL--SQESHGDILIFMSGEREIRD 305 V GRTYPVE+ Y +++ DD D + + V ++ ++ D+L F++G+ EI Sbjct: 208 IVQGRTYPVEIFYANSLDKKDD---DYVFNVLTTVLQIHRTEPLSSDVLAFLTGQEEIET 264 Query: 306 TADAL---NKLNLRHTEILPLYARLSNSEQNRVFQSHS---GRRIVLATNVAETSLTVPG 359 + ++L LPLYA L S Q RVF+ R+++ ATN+AETS+T+PG Sbjct: 265 ACKKVQEASRLLPGDLVALPLYAGLPPSAQMRVFEPAGIPHTRKVIFATNIAETSITIPG 324 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 ++ ++D G ++ + + L +E ISQ SA QR GR GR + G C RLYSE F S Sbjct: 325 VRIIVDSGKIKVKTFLPDRHIDILRVENISQCSATQRAGRAGREAPGKCYRLYSEKHFHS 384 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 + T PEILR+NL+ V+L++ +GL I + + P K ++ + L L A+ + Sbjct: 385 LSKITVPEILRSNLSVVLLELLRIGLRRIKSLALISNPKKEGLEAAEKHLRLLDAVKQPD 444 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 + KLT +G +LS PVDP AR ++ A ++GC+ E + I + +SI + Sbjct: 445 EKGRLKLTEMGTRLSSFPVDPAFARALIAASQNGCLEEVLTIVAFMSIDSVFVSSAVGHE 504 Query: 540 ASDEKHRRFHDKESDFLAFVNLWN--YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 ++ R+F E D +N++ L ++K L C ++++ + I Sbjct: 505 RTNLSKRKFEAPEGDHCTLLNVYRGYRLARKEKKLEE-----WCEANHVHQRLLNTVFKI 559 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYT--GARNARFSIF 655 QLR + + + S + + L GL + + + + Y+ + I Sbjct: 560 RRQLRDICLKNSLIFRSCGTDTDRLRKTLCQGLFMNACVYERSQDRYSLLISPGTSLKIH 619 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 P S L + P + +LV T+ L+ R ID EW + Sbjct: 620 PSSCLSRSRPTAFIFTDLVRTNELYARDITVIDLEWAK 657 >UniRef50_A9M0L0 ATP-dependent RNA helicase HrpA n=20 Tax=Neisseria RepID=A9M0L0_NEIM0 Length = 1154 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 168/388 (43%), Positives = 245/388 (63%), Gaps = 50/388 (12%) Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 N+ DG L G I T+ + Y+LT LG Q+++LP+DP++AR++L A+KH C+ E ++ Sbjct: 21 NVSDG--LQNSSGHIGTN---TRYRLTKLGEQMARLPIDPKIARILLAAKKHDCMAEILV 75 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRR 579 I SALSIQDPRERP++ + A+ + H RF DK+SDFLA++N+W+ + E+ K LS+ + Sbjct: 76 IASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQ 135 Query: 580 LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN-------------------------- 613 CR +L++LR+REW++++ QL Q E+G+ Sbjct: 136 WCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRLSEIKQLTSSENQGDQDLSA 195 Query: 614 ------------------SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 ++ A Y +IH ALLTGL++++GMK D +YTGAR +RF +F Sbjct: 196 KRKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPDGNDYTGARGSRFHLF 255 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 P S LFK PKWVM AELVET++L+ R A I PEW+E A HL++ Y EPHWE+ +G Sbjct: 256 PASALFKAKPKWVMAAELVETTKLYARDVAVIQPEWIEQEAPHLVRYHYFEPHWEQKRGE 315 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 V+A+E+VT+YGL ++ R V+Y ++ P RE+FIR ALV + + FF N KL E Sbjct: 316 VVASERVTLYGLTVLPRRPVSYGKVAPEEAREIFIRSALVAQECDLKADFFVHNKKLIKE 375 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRI 803 + ELEHKSR++D+LVDDE LF FY++R+ Sbjct: 376 ITELEHKSRKQDVLVDDEALFAFYNERL 403 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 143/495 (28%), Positives = 241/495 (48%), Gaps = 15/495 (3%) Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 R F +W K R+ P LL + L++ A I++ +P FW + K +LSY+FEP Sbjct: 666 RTFQAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHP 725 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 DGVT+ +PL +LN++ EW +PG+ RE + IK+LPK +RR VP P + FL Sbjct: 726 LDGVTMTVPLTVLNRLHAPSLEWLVPGMIREKIQLQIKALPKQIRRICVPVPEFITQFLS 785 Query: 931 RVKPLELPLLDSLERELRRMTG-----VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 + P+L L + + + G +++++W ++P+H R++DD ++L Sbjct: 786 QNPDRNAPILPQLAQAIAKTAGDIRIFEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAG 845 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 GR L +L+ L T + E+ + W G LPES + RG ++ + L Sbjct: 846 GRKLHELQQQLGQAAAVTFRDNTQE-FERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQ 904 Query: 1046 DERDS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 E+D +A++LFD +QA G+ L+ L + +K L++ + + + + Sbjct: 905 KEKDGRIALRLFDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLK-HIN 963 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 L DD D+ E+ F ++ R+ L +++ +++ Sbjct: 964 ADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAVYA 1023 Query: 1165 NINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA 1224 +N +L G+ +T L L GF T + + YL+A+ RLEK + Sbjct: 1024 ELNSKL-GKHPLTHLLRLRLQTLLAA-----GFATRTPWAQWPRLPIYLKAMTLRLEKYS 1077 Query: 1225 VDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED-VKEIRWMIEELRVSYFAQQLGTP 1283 +P RD A+ ++ ++Q WQ+ + L D + +WMIEELRVS FAQ+L TP Sbjct: 1078 SNPARDAAREADIQELEQMWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTP 1137 Query: 1284 YPISDKRILQAMEQI 1298 YP+S KR+L+ E+I Sbjct: 1138 YPVSVKRLLKEWEKI 1152 >UniRef50_Q3LWK1 mRNA splicing factor PRP22 n=1 Tax=Bigelowiella natans RepID=Q3LWK1_BIGNA Length = 643 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 208/647 (32%), Positives = 352/647 (54%), Gaps = 48/647 (7%) Query: 68 RPEITYPD-NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 +PE++ +LP+ + ++ ++ + +++V+I+ GETGSGK+TQ+P+I + I Sbjct: 19 KPELSTDSMSLPIEEIRKVLVPFLLNNKVLIIYGETGSGKSTQIPQILLRSDNYSNSYIC 78 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AA ++A R++ ELK+E G +G+ +RF D+VS NT +K TDGILL E+ + Sbjct: 79 CTQPRRIAAVSLALRVSNELKSEIGCLVGFSIRFEDNVSSNTRIKYCTDGILLKELSLNP 138 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 +L++Y IIIDEAHER+LN D LLG K ++ + + IITSATID ++FS N PI Sbjct: 139 VLIEYSHIIIDEAHERTLNTDILLGLSKSIMKKNKKITFIITSATIDIKKFSWFLNRCPI 198 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREI--- 303 + G+ + V + + I + + + +QAI + +E GDIL+F++G+ +I Sbjct: 199 FTIPGKKFRVSILF--IKKLNFEYLKMAIQAI---IYIHKKEKLGDILVFLTGKSDIEFI 253 Query: 304 -----RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLT 356 ++ N+ LR ++L +++ L S+Q+ +F+ H+ RR +L+TN+ ETSLT Sbjct: 254 ENYFEKNIHKVNNQSKLR-LKVLKIFSNLPVSKQSLIFKKHAINSRRCILSTNITETSLT 312 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 +P I+YVID G + Y + + L I PIS++SA+QR GR GRVS+G C RLY+E Sbjct: 313 IPSIRYVIDSGYVKSKFYDPKANSENLLIVPISKSSADQRAGRSGRVSDGKCFRLYTEYV 372 Query: 417 FLSRPEFTD-PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 + + ++ PEI R+NL + IL + LG ++ +F F++ P I + L L A+ Sbjct: 373 YNNEMRKSNIPEIKRSNLLNTILILKTLGYVNVMSFDFIDKPSIFAIGKALEELFMLKAL 432 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 + LT GR +S P+DP+L+R++L +++ P E + Sbjct: 433 NKKGE-----LTNSGRLMSLFPIDPKLSRVLL---------------VSITFFVPIEIAI 472 Query: 536 DKQQASDEKHRRFHDK-----ESDFLAFVNLW----NYLGEQQKALSSNAFRRLCRTDYL 586 S+ + FH+K +++ F +L+ YL ++ L +N+ R C + L Sbjct: 473 IIGIISNSSN-LFHEKNLVSLKNETKYFNSLYGDHVTYLNIYKEWLKNNSSREWCVQNAL 531 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 NYL + + I QL ++K+L I + + + Y I + G +I K ++ Sbjct: 532 NYLYLANSKKICKQLLFLIKKLDIKIICKGSNYTNICKSFTKGFSKNIARKAKNEYYKII 591 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 + + P S L P W++ ++ S + ++ PEW E Sbjct: 592 YEKTLYKLHPKSSLLGTKPNWIVFETIINISGEYLYNVSKTKPEWSE 638 >UniRef50_Q22ZC0 Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22ZC0_TETTH Length = 699 Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 195/540 (36%), Positives = 313/540 (57%), Gaps = 33/540 (6%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 NLP+ + +Q +L+ I+ +Q+ ++AGETG GKTTQ+P+ +E G +I TQPRR+AA Sbjct: 40 NLPIFKHRQGLLDKIKSNQISVIAGETGCGKTTQIPQYLIEEGLNKNRMIAVTQPRRVAA 99 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHV-SDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 T+A R+A+E+ T G +GY VRF + V +NT + MTDG+LL E D L ++ I Sbjct: 100 ITIAQRVAQEMNTTVGNKVGYSVRFEEAVDKNNTKLLYMTDGMLLRETIVDPNLSRFSII 159 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 +IDEAHER++N D L+ LK+L RR DLKIII SATI+ E+F+ F II + GR + Sbjct: 160 VIDEAHERTINSDLLISLLKQLSERRKDLKIIIMSATIETEKFANFFETENIIYLEGRCH 219 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN-K 312 P+EV Y + D L A + + ++ +E GDIL F+ G+ +I D L K Sbjct: 220 PIEVFY------SKKPHADYLDAALNTILQIHFEEQDGDILCFLVGQEDIEDMQQMLEEK 273 Query: 313 LNL-----RHTEILPLYARLSNSEQNRVFQ-SHSG-RRIVLATNVAETSLTVPGIKYVID 365 + L + I LYA L + Q F+ S G R++VL+TN+AETS+T+ GIKYV+D Sbjct: 274 IELFPKEAKKLNICTLYAALPSHLQLLAFEKSQEGERKVVLSTNIAETSVTIDGIKYVVD 333 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 PG + +Y+ ++ L + P+S++SA QR GR GR S G C RLY++ + EF Sbjct: 334 PGLVKTRKYNPNKLIEMLLVVPVSKSSAMQRAGRAGRQSAGKCFRLYTKYTHDTLAEFML 393 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEILR+NL++VILQM A+G+ D+ F F++ P + + + L+++ A+ +E + + Sbjct: 394 PEILRSNLSTVILQMKAIGIKDVKGFQFIDRPHEDQFIESIENLQQMNALDANENITLH- 452 Query: 486 LTPLGRQLSQLPVDPRLARMVLE--AQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 G+++++LP++P A +L A + + S + +++ P + + + Sbjct: 453 ----GKEMAELPLEPIYAHFMLVAFATNPNSISVVLSAISLMQVENLFFIPKGAKISLLD 508 Query: 544 KHRRFHDKESDFLAFVNLWN--YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 RF SD L VN+ + YL + +K+ C+ +++N +++ ++ QL Sbjct: 509 VLLRFQLGNSDQLTKVNMLHQYYLAKNKKS--------FCKENFINQKNIKKALEVRQQL 560 >UniRef50_P36009 Probable ATP-dependent RNA helicase DHR2 n=16 Tax=Saccharomycetales RepID=DHR2_YEAST Length = 735 Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 223/661 (33%), Positives = 359/661 (54%), Gaps = 54/661 (8%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK--GLIGHTQPRR 132 + LPV Q K++I+ I + V ++ GETGSGK+TQ+P+ +E K G I TQPRR Sbjct: 79 ETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRR 138 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AA +A R+A+E + G +GY VRF + + T +K +TDG+LL E+ + L +Y Sbjct: 139 VAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYS 198 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPR-RPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 I+IDEAHER++ D +LG+LK L+ RPDL+II+ SAT+ E+FS FNNAPI+ V G Sbjct: 199 VIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEG 258 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADAL 310 R + V+ Y + DD + A+ +++Q E GDIL F+ G+ EI + Sbjct: 259 RKFDVKQYY--LKAPTDDI----VDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIM 312 Query: 311 NKLNLRHTE--------ILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGI 360 K+ ++ PLYA L +Q+ VF G R++V +TN+AETS+T+ G+ Sbjct: 313 EKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGV 372 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 K+V+D G ++ + ++ + L PISQASA QR GR GR SEG RLY E D++ Sbjct: 373 KFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKL 432 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P+ ++PEI R+++ S +L + G+ D+ + + E P K I G++ L ELGA+ T Sbjct: 433 PKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRG- 491 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 K+T G+Q++ LP+ P L+ ++++A + GC+ + + I S LS+++ P ++ Sbjct: 492 ----KITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNP-SPEER 546 Query: 541 SDEKHRRFH-----DKESDFLAFVNLWNY----LGEQQKALS--SNAFRRLCRT--DYLN 587 + RR + D + L++ LG+ Q A S ++ + LC + + N Sbjct: 547 DEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKN 606 Query: 588 YLRVREWQDIYTQ--------LRQVVKELGIPVNSEPAEY-REIHIALLTGLLSHIGMKD 638 +RVR+ +Y + + K++G E E +I LTG + + + Sbjct: 607 VIRVRDQLRVYCKRLFSSISEEDEESKKIG-----EDGELISKILKCFLTGFIKNTAIGM 661 Query: 639 ADKQEYTGARNARFSIFPGSGLF-KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 D+ T + SI P S LF K +M E V T++ + R +RI+ W++ V Sbjct: 662 PDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYARNVSRIELSWLQEVVT 721 Query: 698 H 698 + Sbjct: 722 N 722 >UniRef50_A2F2U1 Putative uncharacterized protein n=2 Tax=Trichomonas vaginalis RepID=A2F2U1_TRIVA Length = 706 Score = 332 bits (850), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 224/656 (34%), Positives = 363/656 (55%), Gaps = 61/656 (9%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAA 135 LPV + + +I+ AIRD+ +VI+ G+TGSGKTTQ+P+ +E G I TQPRR+AA Sbjct: 37 LPVYEHRMEIIAAIRDNPIVIIEGQTGSGKTTQIPQFVLEEALSPYGKKIVCTQPRRVAA 96 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A R+A+E+ + G +GY VR+ D+VS+NT + MTDG+L+ E D + +Y +I Sbjct: 97 ISIATRVAQEMDVKLGDVVGYSVRYDDYVSENTKLVYMTDGLLMREFISDPKISKYGVVI 156 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA----PIIEVSG 251 IDEAHER++N D ++G LK + RPDLKIII SAT+D +F + + + P +++ G Sbjct: 157 IDEAHERTVNTDIIIGILKLIGNVRPDLKIIIMSATLDAGKFVQFYTHGDITPPHLKIPG 216 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALN 311 R + VEV ++P + + + T A+ ++ L +ES GDILIFM+GE EI L Sbjct: 217 RQFNVEVFHQPQMVQNEIT-----AAVNKCMEILEKESSGDILIFMTGEDEIERACSILR 271 Query: 312 KLNLR--------HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIK 361 R + PLYA L EQ +VF S R++V++TN+AETS+T+ G+ Sbjct: 272 DRISRTRVTGSVVDALVFPLYAALPPGEQAKVFNKLSAGTRKVVVSTNIAETSVTIDGVV 331 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVID G + S YS ++ + L IS+A+ANQRKGR GR +G C R+Y+++ + Sbjct: 332 YVIDCGYVKQSGYSPSSRKRSLNRVYISKAAANQRKGRAGRTCDGFCYRMYTQEQYEMME 391 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT---- 477 E + PEI R++L SVIL M A + DI FPF++ P + + V LEEL + T Sbjct: 392 EQSVPEIQRSDLCSVILLMLAAHISDIVHFPFLDHPHYKLL---VGALEELYHLDTFLPH 448 Query: 478 ---DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP-RER 533 + + L+ G+ ++ LP++P+ A+ +L + ++G R+ + I + LS Q Sbjct: 449 SPLPQNSLPEVLSTEGKLMAGLPIEPKYAKALLSSYEYGNSRDIIAIVAILSEQGQIFLH 508 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 P +K++ +D H+ F +++ D L + ++ Y+ + K S +++ N+ + Sbjct: 509 PRNKKKEADIAHKPFINEKGDHLTLLQVYKEYIRQGNKGTS------WAISNFFNHRSLE 562 Query: 593 EWQDIYTQLRQVVK----------ELGIPVNSEPAEYREIHIALLTGLLSHIG-MKDADK 641 + QL +++K + PVN E + +ALL G ++ + + +K Sbjct: 563 NARKAAKQLERLLKNFNRYRNEDEDFNAPVNEE-----KFFLALLKGSFMNVAKLGEHEK 617 Query: 642 QEYTGARNA-----RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + R +FS S LF+ KWV+ E V+T + R + I+P W+ Sbjct: 618 YQVVTGRGQQKAEIKFSALETS-LFED-KKWVIFDEFVQTDHDYLRTVSVINPNWL 671 >UniRef50_C0DXW8 Putative uncharacterized protein n=2 Tax=Neisseriaceae RepID=C0DXW8_EIKCO Length = 1315 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 162/365 (44%), Positives = 234/365 (64%), Gaps = 45/365 (12%) Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 Y+LT LG Q+++LP+DP++AR++L A+KH C+ E ++I SALSIQDPRERP++ + A+ + Sbjct: 42 YRLTKLGEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAK 101 Query: 544 KHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 H RF DK+SDFLA++N+W+ + E+ K LS+ + CR +L++LR+REW++++ QL Sbjct: 102 AHERFTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLA 161 Query: 603 QVVKELGIPVN--------------------------------------------SEPAE 618 Q E+G+ ++ A Sbjct: 162 QTAIEMGLTTKEAAFRRPPEAKQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAG 221 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 Y +IH ALLTGL++++GMK D +YTGAR +RF +FP S LFK PKWVM AELVET++ Sbjct: 222 YEQIHRALLTGLIANVGMKSPDGNDYTGARGSRFHLFPASTLFKAKPKWVMAAELVETTK 281 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYS 738 L+ R A I PEW+E A HL++ Y EPHWE+ +G V+A+E+VT+YGL ++ R V+Y Sbjct: 282 LYARDVAAIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRPVSYG 341 Query: 739 QIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF 798 +I P RE+FIR ALV + + FF N KL E+ ELEHKSR++D+LVDDE LF F Sbjct: 342 RIAPEEAREIFIRSALVAQECDLKAEFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAF 401 Query: 799 YDQRI 803 Y +R+ Sbjct: 402 YHERL 406 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 143/495 (28%), Positives = 249/495 (50%), Gaps = 15/495 (3%) Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 R F +W K R+ P LL + L++ A I++ +P W + K +LSY+FEP Sbjct: 827 RTFQAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFPKHWQTADGKFKLSYRFEPHHP 886 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 DGVT+ +PL +LN++ + EW +PG+ RE + IK+LPK +RR VP P + FL Sbjct: 887 LDGVTLTLPLTVLNRISPAALEWLVPGMIREKIQLQIKALPKQIRRICVPVPEFITQFLS 946 Query: 931 RVKPLELPLLDSLERELRRMTG-----VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 + P+L L + + + G +++++W ++P+H R++DD ++L Sbjct: 947 QNPDRNAPILPQLAQVIAKTAGDIRILEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAM 1006 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 GR L ++ L GK T E+ + W G LPES + RG ++ + L Sbjct: 1007 GRDLIQIQQQL-GKAAATTFRDNTQEFERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQ 1065 Query: 1046 DERDS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 E+D +A++LFD +QA G+ L+ L + +KYL++ + + + + Sbjct: 1066 KEKDGRIALRLFDTSAAAEQAHRLGVIELMKLQLKEQVKYLNKGIQGFTQAAMLLK-HIN 1124 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 L DD D+ E+ F ++ R+ L +++ +++ A Sbjct: 1125 ADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYA 1184 Query: 1165 NINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA 1224 +N +L G+ +T + + ++ L+ GF + + + YL+A+ RLEK + Sbjct: 1185 ELNGKL-GKHPITHLM-----RQRLQTLLAPGFASHTPWAQWPRLPIYLKAMTLRLEKYS 1238 Query: 1225 VDPHRDRAQMLKVENVQQAWQQWINKL-PPARREDEDVKEIRWMIEELRVSYFAQQLGTP 1283 +P RD A+ ++ ++Q WQ+ + L + +D+ +WMIEELRVS FAQ+L TP Sbjct: 1239 GNPARDAAREADIQELEQMWQEKTDSLIKQGQPVSDDLAAFKWMIEELRVSLFAQELKTP 1298 Query: 1284 YPISDKRILQAMEQI 1298 YP+S KR+L+ E+I Sbjct: 1299 YPVSVKRLLKEWEKI 1313 >UniRef50_B8C4C7 Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana RepID=B8C4C7_THAPS Length = 702 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 221/695 (31%), Positives = 347/695 (49%), Gaps = 87/695 (12%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG------RGIKGLIGHTQP 130 LPV Q + ++ + + ++ VV+ ETGSGK+TQ+P E G + I TQP Sbjct: 15 LPVYQHRAELCKLVANNDVVLAVAETGSGKSTQIPAYVYESGLLTTSAKAYARTICVTQP 74 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS----DNTMVKLMTDGILLAEIQQDR 186 RR+AA T+A R++EEL PG +G++VRF D + T + TDG+LL E D Sbjct: 75 RRVAAVTLAKRVSEELNCVPGTIVGHRVRFDDTTDVRGFNTTKIIYATDGMLLREAMSDP 134 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR-PDLKIIITSATIDPERFSRHFNNAP 245 LL +Y +++DEAHERSL D L G ++ L P L++ + SAT+D F F + Sbjct: 135 LLQRYGLVVLDEAHERSLQTDVLFGMKQDALELGVPPLRVCVMSATLDIATFQAFFPGSA 194 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQL-QAIFDAVDELSQESHGDILIFMSGEREIR 304 +I++ GR +PV+ Y D + D + A+ A+ GD+L+F+ G+ EI Sbjct: 195 MIKIPGRQFPVQAVY------TDSIQEDYIDSALKTAIQIHKYGEEGDVLVFLPGQDEIE 248 Query: 305 DTA---------------------DALNKLNLRHTEILPLYARLSNSEQNRVFQSH---S 340 D A D+ N + + I LYA L Q F+ Sbjct: 249 DLASLNNNNNTDTVQNIKGIGTSIDSGNSMIVNGVLICVLYAALPPDAQMIAFRPKPEGC 308 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 R+I+L+TN+AETS+T+ GIKYV+D G + YS T ++ L + IS+A A QR GR Sbjct: 309 TRKIILSTNIAETSVTLDGIKYVVDCGKHKSREYSSSTGMESLKVSDISKAQAAQRMGRA 368 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GRVSEG+C+RLY E F S + T PEILR NLASV+LQ+ +G+ D +F F+ P Sbjct: 369 GRVSEGVCLRLYPEIAFDSLADTTVPEILRVNLASVVLQLKGMGVHDPRSFSFLTPPSPE 428 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 NI LL LGAI + LT G+++S+LP+DP A ++L++ K CV E + Sbjct: 429 NIVKSFELLTTLGAID-----KSMNLTMYGKEMSKLPLDPVFAHLLLQSPKFECVSEVLT 483 Query: 521 ITSALSIQDPRERPMDK--------QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572 + LS ++ RP + + HRRF E D +N++N ++ + Sbjct: 484 VVGMLSAENIFYRPGGRGDDSGGSLSAKATAAHRRFESYEGDLPTLMNVYNAWKKEAIYV 543 Query: 573 SSNAFRRL----CRTDYLNYLRVREWQDIYTQLRQVV------KELGIPVNSEPAE---- 618 NA + L C+ ++++ + D+ QL ++ LG+ VNS + Sbjct: 544 PGNAAKMLHGDWCKQNFISGRALVRAHDVRNQLSELCCRAVEKNGLGMDVNSTCVDDMTT 603 Query: 619 -YREIHIALLTGLLSHI--------------GMKDADKQEY-TGARNARFSIFPGSGLFK 662 ++ + L + + + G + + Y T + S+ P S +F Sbjct: 604 FFKCVCAGLFLQVATRVPSLAQTSKSSAPKAGSIPSTRGHYKTRIGGSIVSVHPMSSMFG 663 Query: 663 K--PPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 + PK V+ +L+ T+R++ R +I EW++ + Sbjct: 664 RNPAPKCVVYTDLLFTTRMYIRGVTQIREEWLDDI 698 >UniRef50_D2A664 Putative uncharacterized protein GLEAN_15049 n=1 Tax=Tribolium castaneum RepID=D2A664_TRICA Length = 1085 Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 187/500 (37%), Positives = 304/500 (60%), Gaps = 21/500 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP++ +Q+IL+ + +V+++AG+TG GK+TQ+P+ + G K ++ TQPRR+A Sbjct: 117 LPIAGYRQEILDKLGGCRVMLIAGDTGCGKSTQVPQFVYQ--GGYKKIVC-TQPRRIACV 173 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A R+A E T+ +GY++RF +T + MT+G+LL + Q++ L YD II+ Sbjct: 174 SLAKRVAHETLTDFKSTVGYQIRFEKSKRADTSIVFMTEGLLLRQAQEEDTLNSYDVIIL 233 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN--NAPIIEVSGRTY 254 DE HER L+ DFL+G +K LL +R D K+I+ SATI+ + F+ +F ++ V GR + Sbjct: 234 DEVHERHLHGDFLVGIMKCLLYKRQDFKLILMSATINLDLFTNYFKREKLEVVRVPGRLF 293 Query: 255 PVEVRYRPIVEEADDTERDQLQA-----IFDAVDELSQESH-GDILIFMSGEREIRDTAD 308 P+E+ YRPI+ + + +R++L I +DE Q S GD+LIF++G EI AD Sbjct: 294 PIEIVYRPIIRDPYERKREKLDCTPYLQIIQMIDEKYQPSQKGDLLIFLNGYSEISTLAD 353 Query: 309 ALNKLNL--RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVI 364 A+++ + ++ +L L++ LS EQ++VF R+ +++TN+AETS+T+ GI++VI Sbjct: 354 AVSEYSQVKKNWIVLQLHSSLSLEEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVI 413 Query: 365 DPGTARISRYSYRTK--VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 D G +++R +Y T V +L ISQ SA QR GR GR GIC RLYSE+DF + Sbjct: 414 DSG--KVNRMTYHTSGGVNKLTETTISQDSAKQRSGRAGRTGPGICYRLYSEEDFKNFEI 471 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 FT EI L +++L M +LGL D+ FPF+E P +++I++GV L+ GA+ + + + Sbjct: 472 FTPAEIHLVPLDTLLLHMISLGLTDLNHFPFLEKPSEKSIEEGVEKLKFTGAL--ELKIN 529 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 LTPLG LSQLPVD + +M++ + G V + + + LSIQ P + + + Sbjct: 530 CLALTPLGDALSQLPVDLSIGKMLVLSTVFGNVNAVLAVAALLSIQSPLTQNAYRNTEAQ 589 Query: 543 EKHRRFHDKESDFLAFVNLW 562 + R D ++ +N + Sbjct: 590 DLRRVLDSNHGDPISMLNYY 609 >UniRef50_C1E1Z9 Predicted protein n=2 Tax=Micromonas RepID=C1E1Z9_9CHLO Length = 725 Score = 328 bits (841), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 229/681 (33%), Positives = 345/681 (50%), Gaps = 71/681 (10%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRL 133 + LP+ + + IL + ++ G+TG GKTTQ+P+ +E G G L+ TQPRR+ Sbjct: 49 ERLPIFKTRDAILHLVETRATTVLVGQTGCGKTTQVPQYLVEAGWTAGGRLVACTQPRRV 108 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYD 192 AA TVA+R+A+E+ G +GY VRF + + T V+ TDG+LL E+ +D LL +Y Sbjct: 109 AAMTVASRVADEMGVTLGAEVGYAVRFENVSTPGVTRVRFCTDGVLLRELMEDPLLSRYS 168 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN---------- 242 +++DEAHERSL D LLG LK++ RRPDL+III SATI E F+ F+ Sbjct: 169 VVMVDEAHERSLATDLLLGLLKKVQRRRPDLRIIIASATIQAEEFAAFFDTRHLEPKPAS 228 Query: 243 -----NAP-----IIEVSGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQESH 290 NAP I+ V GR + V + Y +P+ + A+ A+D E Sbjct: 229 EASSVNAPSREPGIVSVEGRAHTVLIHYLEKPVPDYVK-------AAVGAAIDVHRAEGP 281 Query: 291 GDILIFMSGEREIRDTADAL------NKLNL--------------RHTEILPLYARLSNS 330 GD+L+F++GE EI L N L R T + PLYA LS + Sbjct: 282 GDVLVFLTGEEEIEAAVSMLQEEAEDNSRRLLGGGAGTNPAGGPERFT-VHPLYAGLSPA 340 Query: 331 EQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 +Q F+ R+IV+A+NVAETS+T+ G+ YV+D + Y ++ L Sbjct: 341 QQMEAFRPAPRYTRKIVVASNVAETSVTIEGVVYVVDCCFVKQKAYDPTRGMESLLTAEA 400 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 S+ASANQR GR GRV G RL +E F PE PE++R++LA+ +LQ+ ALG+ +I Sbjct: 401 SRASANQRAGRAGRVRPGKAYRLCTEKAFRDLPETAPPEMIRSDLAATVLQLKALGIDNI 460 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE 508 F ++ P N+ + LL L AI D + + PLG L++LP++P+L + +L Sbjct: 461 MNFEWLSPPPAANMIKALELLYALQAIDDDARLT----KPLGMHLAELPLEPQLGKALLV 516 Query: 509 AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 + + GCV E + +++ L +Q P +Q+ DE RF E D + +N+ Sbjct: 517 SGELGCVEEMLTVSAYLQVQTLWVSPRGRQKRLDECRDRFAVAEGDAVTALNI------- 569 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLT 628 A R + L++ + DI QL + V+ +G+ V+S + + A+ Sbjct: 570 HTAWCGGRARSFADKNMLSHRALVRASDIRAQLARHVRRVGLVVSSAGKDSAPVRRAMTA 629 Query: 629 GLLSHIGM-----KDADKQEYTGAR-NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 G ++ A+ + R A I PGS LF+ P V+ A V T R + R Sbjct: 630 GFFANAAALAPHGGGAEGSAFRSVRGGATLFIHPGSVLFRARPAMVVYAAAVRTGREYMR 689 Query: 683 IAARIDPEWVEPVAQHLIKRT 703 IDPEW+ +A H T Sbjct: 690 DVTAIDPEWLSELAPHFYAMT 710 >UniRef50_Q16ZW5 ATP-dependent RNA helicase n=11 Tax=Eukaryota RepID=Q16ZW5_AEDAE Length = 1246 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 201/576 (34%), Positives = 316/576 (54%), Gaps = 55/576 (9%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 NLPV+ + +I+ A+++ Q+VI+AG+TG GK+TQ+P+ G I TQPRR+A Sbjct: 251 NLPVASHRDEIVAAVKNEQIVILAGDTGCGKSTQVPQYLYHAGYE---KIACTQPRRIAC 307 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +++ R+A E+ E G +GY++RF S T + +T+G+LL ++ + L QY II Sbjct: 308 ISLSKRVAHEMLCEYGTQVGYQIRFERSKSTQTNILFITEGLLLRQLSAEENLSQYSVII 367 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF--NNAPIIEVSGRT 253 +DE HER L+ DFLLG K L+ +PD+K+++ SATI+ + F +F A IIEV GR Sbjct: 368 LDEVHERHLHGDFLLGITKCLMRAKPDIKLVLMSATINIKLFGDYFAEEKAQIIEVPGRL 427 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH----------------GDILIFM 297 +P+++ Y P +++ T + + D +S E + GD+LIF+ Sbjct: 428 FPIKLHYMPQIQDVPTTSSGKSKQ--KTSDRISPEPYIQILQLIDQKYPPTEKGDVLIFL 485 Query: 298 SGEREIRDTADALNKLNLRHTE--ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAET 353 SG EI DA + ++ ILPL++ LS +EQ++VF R+ +++TN+AET Sbjct: 486 SGLNEITSIVDAAKEYAEKNKNWIILPLHSTLSIAEQDKVFDYPPDGIRKCIISTNIAET 545 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 S+T+ GI++VID G + Y TK+QRL IS+ASA QRKGR GR GIC RLYS Sbjct: 546 SVTIDGIRFVIDSGKVKEMSYDATTKMQRLKEFWISKASAEQRKGRAGRTGPGICYRLYS 605 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E F +T EIL+ L S++LQM ++GL + FPF+E+P NI++ + L+ Sbjct: 606 EKQFYDFESYTTAEILKVPLESLLLQMISMGLPNARMFPFIESPPAENIENAIMNLKHHE 665 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV----REAMIITSALSIQD 529 A+T DE KLTPLG+ L+++PVD + +M+L GCV + + + + LS+Q Sbjct: 666 ALTVDE-----KLTPLGKALARIPVDIGIGKMLL----MGCVFQQLQPVLTLAATLSVQS 716 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAF-----------R 578 P ++ + + F D + +N + E L N F + Sbjct: 717 PFTNRAYREPECERARKSFESDHGDPITLLNAYKEWLE----LKQNRFEYRRDEHRESSK 772 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS 614 CR L R E + Q + ++++ G+ N+ Sbjct: 773 SWCRRRGLEEQRFYEITKLRRQFQDLLQDCGLMENA 808 >UniRef50_B5RU49 DEHA2E21340p n=4 Tax=Saccharomycetales RepID=B5RU49_DEBHA Length = 841 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 228/679 (33%), Positives = 355/679 (52%), Gaps = 68/679 (10%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ Q K +IL + +QV ++ GETGSGK+TQ+P+ M R I TQPRR+AA Sbjct: 167 LPIFQHKDEILRYVNKNQVTVIIGETGSGKSTQIPQFLMPTNRK---QIAVTQPRRVAAA 223 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A R++EE G +GY+VRFS+ + T +K +TDG+LL EI D L +Y TII Sbjct: 224 SLAARVSEEYGCRLGQEVGYQVRFSNVTHPHKTKLKYLTDGMLLREIMLDGNLNKYSTII 283 Query: 196 IDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 IDEAHER++ D ++G+LKEL+ +R DLKIII SAT++ E FS+ F+ API+ V G+ Sbjct: 284 IDEAHERTILTDLIMGFLKELIVSKKRADLKIIIMSATLNAELFSKFFDQAPILFVEGKM 343 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL 313 YPV Y AD TE + V E GDIL F+ G+ EI + L ++ Sbjct: 344 YPVSKHYL-----ADSTEDIADTMVRSIVQVNMSEQEGDILCFLPGQEEIDSCVNILQQV 398 Query: 314 NLRHTE------ILPLYARLSNSEQNRVFQSHSGRR--IVLATNVAETSLTVPGIKYVID 365 + LPLYA LS ++Q+++F+ GR+ ++LATN+AETS+TV G+KYVID Sbjct: 399 APQLPREAPLIVALPLYAALSPAQQSKIFEKLPGRKRKVILATNIAETSITVSGVKYVID 458 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFT 424 G ++ + ++ + L PISQASA QR GR GR S G RLYSE F ++ P+ Sbjct: 459 SGLRKVKVWKHQLGLSTLLTTPISQASAKQRAGRAGRESPGKVFRLYSEKTFFNQLPKQQ 518 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 + EI+R ++ IL + +G+ D+ + ++E P + I + L LGA+ D+ Sbjct: 519 ESEIMRNDIVLPILTLKKIGVDDLLNWTWLEHPGQEAILSALTTLYSLGAL--DDSG--- 573 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDE 543 K+T LG ++S LP+ P+L+ ++L A G + + I + +S+ + + DE Sbjct: 574 KITKLGYKMSVLPLPPQLSVVLLSALDFGVLSSVIDIVACISVDNLILNVGSGNGEIRDE 633 Query: 544 ---KHRRFHD---KESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY------LRV 591 K R + K+ D +A ++Y E +++ + C+ + +Y +RV Sbjct: 634 INFKRRNYCPLGCKQGDLIAVKEFFSYYKELIDNGNTSEAKAWCKELHFSYKGFKNVMRV 693 Query: 592 REWQDIYT-----------------QLRQVVKELG------------IPVNSEPAEYREI 622 R Y QLR + +L V+ +P + I Sbjct: 694 RNQLKDYMMATVRQDDTLKQHERDQQLRNIKLQLDAESLLDDDSDADTGVSKQPLDIPAI 753 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP-KWVMVAELVETSRLWG 681 + L G +++ + D+ T SI P S LF K +M E V T++ +G Sbjct: 754 LKSFLKGYITNTAIGMPDRSYRTCTTGQLISIHPSSTLFGKANLDAIMYIEYVYTAKGYG 813 Query: 682 RIAARIDPEWVEPVAQHLI 700 R + I+ W++ +A L+ Sbjct: 814 RNCSVIELGWLQEIAPQLL 832 >UniRef50_Q9HE06 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 n=1 Tax=Schizosaccharomyces pombe RepID=YK99_SCHPO Length = 647 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 209/636 (32%), Positives = 343/636 (53%), Gaps = 39/636 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK-GLIGHTQPRRLAA 135 LP+++ + +L A+ +Q+ IV G TG GKTTQ+P+ E G + G+IG TQPRRL A Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++V+ R++ EL + PG GY ++F +VS+ T +K MTDGILL EI D LL +Y +I Sbjct: 85 KSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVI 144 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS--GRT 253 +DE HER+L+ D LLG LK +L +R D +++++SA++D + S+ F + +S G+ Sbjct: 145 LDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKL 204 Query: 254 YPVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALN 311 +PVE + +P D AI ++ S GDIL+F+SG +EI + Sbjct: 205 FPVETLFLQKPTENYVD-------SAIETVININSTYPPGDILVFLSGRKEIEYCIKKIE 257 Query: 312 KLNLRHTE------ILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYV 363 + +E LPL+A L+ EQ RVF + G R+++ +TN+AETS+T+ GI YV Sbjct: 258 DSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYV 317 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPE 422 +D G + Y+ T+ +L PIS++SA QR GR GR G RLY+E + L + E Sbjct: 318 VDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEE 377 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 F + +IL +++ ++L + LGL +I FPF P ++ + L LG + DE + Sbjct: 378 F-EADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVL--DESGN 434 Query: 483 AYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA- 540 LT PLG Q+S +D +++ +L + + GC E + I S L+ + P + Sbjct: 435 ---LTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKND 491 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 + H F E D + +N++ +K L + CR +YLNY +R+ DI T Sbjct: 492 AFVAHSSFFANEGDIITALNVFESFVGNKKDL------QWCRKNYLNYQTLRQALDIRTH 545 Query: 601 LRQVVKELGIPVNSE--PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 L + + + IP ++ +I LL G + ++ D Y + + S Sbjct: 546 LVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDG-SYKTIGGKQVWLDSSS 604 Query: 659 GLFKKPPKWVMVAELVET-SRLWGRIAARIDPEWVE 693 L +K W+M + VE+ ++++ + ++I+ W++ Sbjct: 605 VLHEKKTPWIMYSSAVESETQIFVKNISKIESFWLD 640 >UniRef50_UPI0001924504 PREDICTED: similar to Probable ATP-dependent RNA helicase DHX34 n=1 Tax=Hydra magnipapillata RepID=UPI0001924504 Length = 1118 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 201/547 (36%), Positives = 312/547 (57%), Gaps = 20/547 (3%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 +NLP+ Q +Q I+ A++ +QVVIVAG+TG GK+TQ+P+ + G I TQPRRLA Sbjct: 128 NNLPIKQYEQSIVYALQQNQVVIVAGDTGCGKSTQVPQYLLLNGYSN---IACTQPRRLA 184 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 ++A R+ E E I Y+VRF + + NT V +T+G+LL + Q D L YD + Sbjct: 185 CISLAKRVGFETLNEYKSDIAYQVRFETNRTKNTKVVFLTEGLLLRQFQSDPNLSMYDVV 244 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DE HER +N DFLLG LK LL R DLK+I+ SATI+ + F+ +F++AP+I+V GR Y Sbjct: 245 VVDEVHERHINGDFLLGVLKCLLQHRSDLKLILMSATINIDLFASYFHDAPVIQVPGRLY 304 Query: 255 PVEVRYRPIVEEADDTERDQLQ-----AIFDAVDELSQESH-GDILIFMSGEREIRDTAD 308 P+E++Y + + D+L + +D+ S GD+LIFMSG EI + Sbjct: 305 PIELQYMQHFKSELKDKHDRLDPSPYLKVMQLIDKKYPSSERGDLLIFMSGMSEIAAVVE 364 Query: 309 ALNKLNLRHTE--ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVI 364 A + + ILPL++ LS EQ+++F R+ +++TN+AETS+T+ G++++ Sbjct: 365 AAKEYAAKSKSWIILPLHSSLSVEEQDKIFDVAPDGVRKCIVSTNIAETSITIDGVRFIA 424 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G + Y + K+QRL ISQASA QRKGR GR G+C RLYSE+D+ ++ Sbjct: 425 DSGKVKEMSYDPQVKMQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYSEEDYCEFSNYS 484 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI R L +++L M +LGL D FPF+E P K ++ + L+ A+ TD Sbjct: 485 TPEIHRVPLDTLVLHMASLGLRDATRFPFIEPPMKASLVNATYFLKLQNALNTDGT---- 540 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ-QASDE 543 LTPLGR LS+LPVD + +M++ + ++I +ALS+Q P + D ++ D Sbjct: 541 -LTPLGRMLSRLPVDIVIGKMLVMGSLFSIIEPILVIATALSVQSPLTKRFDSNAESCDI 599 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 K + + D ++ ++ + SN+ R+ C+ L R E + Q Sbjct: 600 KRKELFSEHGDPFTLLSAYDEWIIVKSDRRSNS-RKWCKHRGLEEQRFYEMSKLKQQFED 658 Query: 604 VVKELGI 610 ++ + G+ Sbjct: 659 LLIDHGL 665 >UniRef50_Q4QAM3 Pre-mRNA splicing factor, putative n=6 Tax=Trypanosomatidae RepID=Q4QAM3_LEIMA Length = 1138 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 224/707 (31%), Positives = 373/707 (52%), Gaps = 83/707 (11%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 SRR +++ + ++A + +A + D+ V R+A R + ++LP+ K ++L Sbjct: 386 SRRQRKDEQLARIEGRKAQMETLADDADE----VERRDAMRRQ---RESLPIHHCKDELL 438 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEEL 146 + + V +V GETGSGKTTQL + + G G +IG TQPRRLAA VA R+++E+ Sbjct: 439 RYVGESAVTVVVGETGSGKTTQLVQYLYQRGYARHGKIIGCTQPRRLAAIGVARRVSDEM 498 Query: 147 KTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNI 206 G +GY + D + +T VK MTDG+LL E D L +Y +++DEAHERS++ Sbjct: 499 GCALGTTVGYSIHLDDTTTADTRVKFMTDGVLLRETVNDPSLDKYSVVMLDEAHERSVDT 558 Query: 207 DFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR--PIV 264 D L+G LK L RR DLK+I+TSAT+D +FS F NAP E+ G+T+PV++ Y P+ Sbjct: 559 DVLMGVLKLALRRRGDLKLIVTSATMDVRKFSAFFGNAPCYEIPGQTFPVKIHYSATPVA 618 Query: 265 EEADDTERDQLQAIFDAVD---ELSQESHGDILIFMSGEREIRDTADA----LNKLNLRH 317 + +A+F ++ E+ DIL+FM+G ++ T + L +L+ +H Sbjct: 619 DYV-------AEAVFRVCQLHLQMPLEAKHDILVFMTGREDVYGTCELIRRRLTELSPQH 671 Query: 318 TEILPLYARLSNSEQNR-----VFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTAR 370 L + + LS + R V ++ R++V+ATNVAETSLT+ G++YV+D G + Sbjct: 672 LSTLLIISCLSEAAPARSTEIGVLEATPAGLRKVVVATNVAETSLTIDGVRYVVDCGFMK 731 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR--PEFTDPEI 428 + Y + L P SQA ANQRKGR GR +EG C RLY+E + P + PEI Sbjct: 732 TNVYRPSIGMNTLQRYPTSQAQANQRKGRAGRTTEGTCYRLYTEVQYAEEMLPN-SVPEI 790 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 R+++ SV+L + ++G+ + F F++AP N++ + L LG + A +T Sbjct: 791 QRSSVDSVVLLLKSIGVHRLRDFEFMDAPPAANVRSSMFHLWVLGFLD-----DAGAITA 845 Query: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR---ERPMDKQQASDEKH 545 G+Q + P+ P LA+++LE+ GC E I + +S DP+ E P +++ + + H Sbjct: 846 PGQQALEFPMSPVLAKLLLESATMGCALEMARIVAMIS-ADPKNLFELPKGREKVAQQHH 904 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW----------- 594 RF+ +SD L ++++ T YL++ R R+W Sbjct: 905 SRFYANDSDHLTLLHVF--------------------TQYLDHGRSRQWAQDHFLHAPTL 944 Query: 595 ---QDIYTQLRQVVKELGIPVNS-EPAEYREIHIALLTGLLSHIGMK-DADKQEYTGARN 649 D++ QL + +++L +P+ S AE ++ L + + D EY N Sbjct: 945 ARAHDVFAQLIEKLRKLHLPIQSCGHAETDKVRHCLAKAFVLQAARRSDRRWTEYRPLLN 1004 Query: 650 A--RFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 A ++ P S + + P +++ +L+ T + + + ++PEW+ Sbjct: 1005 AGVACAVHPASAVHARSEMPPYIIYNDLLLTHKEYLVMVTAVEPEWL 1051 >UniRef50_B0CX49 Predicted protein n=2 Tax=Agaricales RepID=B0CX49_LACBS Length = 706 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 210/638 (32%), Positives = 334/638 (52%), Gaps = 38/638 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ ++E I+ + V ++ GETGSGKTTQ+P+ +E G +I TQPR++AA Sbjct: 64 LPIYLGADALIEEIKKNDVTVLLGETGSGKTTQVPQYLLESGLAGNRMIAVTQPRKVAAT 123 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A R+A E G +GY VRF + S +T +K MTDG+++ E+ D L +Y +I+ Sbjct: 124 SLAQRVAAEQNGPLGKVVGYAVRFDEKSSPHTRIKYMTDGMIMRELMSDPSLSRYSVVIV 183 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPD---------------LKIIITSATIDPERFSRHF 241 DEAHER+L D L+ LK+L R LKI+I SAT+D E+FS+ F Sbjct: 184 DEAHERTLRTDLLIANLKKLQKERNGSSNAKGKGNSNNSKPLKIVIMSATLDAEKFSKFF 243 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGER 301 +NA I+ V GR +PV++ + E D ++ F + + GD+LIF+ G+ Sbjct: 244 DNAKILYVKGRQHPVKIFHS--AEGQPDYVDSAMRTFFQI---HTDQPPGDVLIFLPGQE 298 Query: 302 EIRDTADALNKLNLRHTE------ILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAET 353 +I +++ R + + P++A + + +VF S + R+ +LATN+AET Sbjct: 299 DIESLEKSIDMFAKRLPQDSPEVLVCPMFAAQAPGKNAKVFLSPPPNTRKCILATNIAET 358 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTK--VQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 S+T+PG+KYVID G + +Y R L I+++SA QR GR GR G+C RL Sbjct: 359 SITIPGVKYVIDTGKCKEKQYLARMAGGFDTLLTRDITKSSAMQRAGRAGREGSGLCFRL 418 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 Y+ED F S +PEILR +L S ILQ+ LG D+ ++APD I ++ L Sbjct: 419 YTEDAFNSMALSGEPEILRCSLTSSILQLRCLGQ-DLMELDLMDAPDTDTICSALKTLFI 477 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 +GA D+Q+ +LTP GR ++ P++P+ A ++ +++HGC E + + S LS Sbjct: 478 IGAF--DKQS---QLTPAGRHMASFPLEPQHACAIVASKEHGCSSEVIDVISVLSASSKL 532 Query: 532 ERPM-DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 + +K+ A E R+F D L +N+ + + + CR +LN Sbjct: 533 FLDVTEKRDAVSEARRKFRHPSGDHLTILNVVRAYQAIASSEKKKSRKDWCRKHFLNERT 592 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLT-GLLSHIGMKDADKQEYTGARN 649 + E ++I QLRQ +G+ + E IA L GL+++ D + Sbjct: 593 LIEAREIREQLRQTCTRVGVDYTTSCGENEGPVIACLGHGLVANSAFLQPDGSYKQTMGS 652 Query: 650 ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 + I PGS L K ++ ELV T++++ R + I Sbjct: 653 SFVKIHPGSTLSDKKVPAIVYDELVYTNQIYARGVSSI 690 >UniRef50_A4ICP7 DEAH-box RNA helicase, putative n=4 Tax=Trypanosomatidae RepID=A4ICP7_LEIIN Length = 944 Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 226/693 (32%), Positives = 348/693 (50%), Gaps = 108/693 (15%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQL------------PKICMEL------ 117 +LP+ Q ++++++ IRD++VVI+ GETGSGKTTQL PK L Sbjct: 192 SLPMHQAREELVKLIRDNRVVIIVGETGSGKTTQLLQYLYEEGFHLGPKARKRLLTTPAG 251 Query: 118 ------------GRGIKGLIGH----------TQPRRLAARTVANRIAEELKTEPGGCIG 155 G G + + TQPRR+AA +VA R+A+E+ G +G Sbjct: 252 AAASSKMKAEADGEGDRAMADEEQEEELRLICTQPRRIAAISVAERVAQEVGCPCGSVVG 311 Query: 156 YKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKE 215 YKVRF D T + +TDG++L E D L I++DEAHERSL+ D LLG L++ Sbjct: 312 YKVRFDDKTGPLTRILFVTDGMMLKEFTNDPDLSSVGAIMVDEAHERSLSTDILLGLLRD 371 Query: 216 LLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQL 275 ++ R PDLK+I+ SATI+ E+FS F+ AP+ VSGRTYPVE+ Y E D + Sbjct: 372 VIRRNPDLKVIVASATINAEKFSDFFDKAPVFTVSGRTYPVELFYSD--EPVADYVTESA 429 Query: 276 QAIFDAVDELSQESHGDILIFMSGEREIRDTADALN------KLNLRHTEILPLYARLSN 329 Q + LS+ GD+L+F+ G+ I A+ L K LR ILP+Y+ + Sbjct: 430 QTVLGL--HLSKPLPGDVLVFLPGQDAIETCAETLQSYMDEAKGRLRPLLILPIYSSMPP 487 Query: 330 SEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP 387 EQ R+++ R++V+ATN+AETS+T+ G+ YV+D G + Y+ + V+ L + P Sbjct: 488 KEQARIYERTLPGTRKVVIATNIAETSITIDGVVYVVDCGLCKQDYYNPQAMVEELRVVP 547 Query: 388 ISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFTDPEILRTNLASVILQMTALGLG 446 SQASA QR GR GR G C RL++ F + P T PEILR ++++V+LQ+ ALG+ Sbjct: 548 TSQASATQRAGRAGRTQPGECYRLFTAYTFHNELPPETIPEILRCSMSAVVLQLKALGIH 607 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 ++ F F++AP +++ + L LGA+ D +LT GR++++ P++P L++ + Sbjct: 608 NLLQFDFLDAPSTASLERALDHLFLLGAMKADG-----RLTVTGRRMAEFPLEPSLSKCL 662 Query: 507 LEAQKHGCVRE-----AMIITSALSI--QDPRERPMDKQQASDEKHRRFHDKESDFLAFV 559 + A GC R AMI ++ I +D +ER Q + F D ++ Sbjct: 663 IRACALGCGRHMAMAAAMITLDSIFINTRDAKER----QHIKSAREHLFGFGNGDVTGYI 718 Query: 560 NL---WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 616 L W G + CR++ +N + +D+ Q+ + +G+ V P Sbjct: 719 RLMEEWLRAGPRAG--------EFCRSNCINARSMLRARDVLDQILKTFDRIGLDVERVP 770 Query: 617 ----------------------AEYREIHI-----ALLTGLLSHIGMKDADKQEYTGARN 649 A +I + ALL+G ++ +ADK Y R Sbjct: 771 SKSHSDGKDLDDENDALEKVLSAAANQIDVEAVTRALLSGFFFNVAKLEADKWSYLVVRP 830 Query: 650 ARFSIFPGSG-LFKKPPKWVMVAELVETSRLWG 681 S+ G+ L VAE+ TS L+G Sbjct: 831 MDTSVPTGAKRLESAGTAEASVAEIHPTSFLFG 863 >UniRef50_Q4UH89 ATP-dependent helicase, putative n=2 Tax=Theileria RepID=Q4UH89_THEAN Length = 1160 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 197/564 (34%), Positives = 314/564 (55%), Gaps = 43/564 (7%) Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 K +IG TQPRR++ +A R+++E+ G +GY +RFSD SD T++K MTDG+LL E Sbjct: 521 KKMIGITQPRRISCINIAKRVSDEMYCIIGNEVGYCIRFSDVTSDKTIIKYMTDGMLLRE 580 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 I D LL Y TI++DEAHER++ D L LKE +R D ++I+TSAT++ E+FS++F Sbjct: 581 ILHDPLLNNYITIMLDEAHERTIATDVLFSLLKETCMKRKDFRLIVTSATLESEKFSKYF 640 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGE 300 N+ I ++ GR++PVE+ + + + E D L+ + + E GDIL+F++GE Sbjct: 641 FNSKIFKIPGRSFPVEIFH------SKEQEFDYLETSLITILNIHLNEKPGDILLFLTGE 694 Query: 301 REI-------RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVA 351 +I + + L +N+ + P+Y+ L +Q ++FQ R+ +LATN+A Sbjct: 695 EDIETGIKILEERLNKLKNMNIPKLLLFPVYSALPQDQQQQIFQPAPPGTRKCILATNIA 754 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 E S+T+ GI YVIDPG +I Y+ +T ++ L I PISQA+A QR GR GR + G C RL Sbjct: 755 EASITIDGILYVIDPGLCKIKSYNPKTGMESLIITPISQANARQRAGRAGRTAPGKCFRL 814 Query: 412 YSEDDF----LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA----PDKRNIQ 463 Y+E F L P PEI R NL +V++ + ++G+ D F F++ P + Sbjct: 815 YTEKTFHEEMLPTP---IPEIQRVNLTNVVIILKSMGINDFLHFDFMDKYALRPCNEMLI 871 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 D + +L LGA+ D++ LT LGR+++Q P+DP L++++L + + C E + I S Sbjct: 872 DALDILYHLGAL--DDEGL---LTHLGRKMAQFPIDPTLSKILLYSIEMDCYNEIITIIS 926 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 LS+Q+ RP DK++ +D+ R+F E D L ++ ++N Q SN + C Sbjct: 927 MLSVQNIFYRPSDKREKADQSRRKFFQSEGDHLTYLYIYNQWSNNQ---FSNYY---CYN 980 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMKDA 639 ++L Y + + QDI QL ++ + + I + +G H +D Sbjct: 981 NFLQYRALIKVQDIKKQLISIIDKYKFMKKKMKIDNLNKTERIQKCICSGFFHHSAKRDE 1040 Query: 640 DKQEYTGARNARFSIFPGSGLFKK 663 D T + I P S LF++ Sbjct: 1041 DSYR-TLLDEQKVYIHPSSSLFQR 1063 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 31/41 (75%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 NLP+ + +++I+ I +Q++IV GETGSGKTTQ+P+ E Sbjct: 378 NLPIYKLREEIINEIIHNQILIVIGETGSGKTTQIPQYLYE 418 >UniRef50_B0ECZ2 ATP-dependent RNA helicase, putative n=2 Tax=Entamoeba RepID=B0ECZ2_ENTDI Length = 664 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 212/658 (32%), Positives = 341/658 (51%), Gaps = 51/658 (7%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LP+ Q K DI+ ++ HQ ++V GETG GKTTQLP+ +E IG TQPRR+A Sbjct: 24 EQLPIRQSKDDIISELKKHQTMVVVGETGCGKTTQLPQFILESNICEGKKIGVTQPRRVA 83 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A T+A R+++E+ G +GY+VRF + +S +T ++ +TDG+LL D L Y I Sbjct: 84 AITLAERVSKEVGCRVGTTVGYRVRFEEKMSKDTKIEYLTDGMLLRTALLDPDLKSYGVI 143 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHER+++ D L+G L+ +L RR DLK+++ SAT+D + FS F P + ++GR + Sbjct: 144 VLDEAHERTVHTDILIGLLRGILRRRKDLKVVVMSATLDSQLFSNFF-AGPTLTIAGRQH 202 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILIFMSGEREIRDTADAL--- 310 P+E+ + + E++D+ D A A+ +L + GDIL+F+ G+ I AL Sbjct: 203 PIELFH---LTESEDSPVD---ASITAILQLHMSAGPGDILVFLPGQDAIESVEAALLER 256 Query: 311 ---NKLNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVID 365 ++ ++LPLYA L +Q +F R+IVL+TN+AETS+T+PG+++VID Sbjct: 257 MKNAPATVKPIQVLPLYAALPPEQQLLIFSPPPPDTRKIVLSTNIAETSVTIPGMRFVID 316 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G + Y + ++ L +S+A A QR GR GR + G C RLY+ F T Sbjct: 317 TGLVKEKEYQSKIGMEALKTTWVSKAQAMQRAGRAGREAPGQCYRLYTSKRFSEFSATTT 376 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI R +L V+LQ+ AL + D+ F F++ P +I L +LGA+ + Sbjct: 377 PEIQRCSLDGVVLQLKALNVIDVTQFDFLQPPSGDSISRAEINLSKLGALENG------R 430 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI--QDPRERPMDKQQASDE 543 +TPLG+ + LPV P AR ++ A + C+ + I + L++ Q P +++A + Sbjct: 431 ITPLGKVMVALPVAPPFARTIIAAAQSNCLAHILCIVAMLAVDTQFFVSAPSIREKA-QQ 489 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 R + D ++L+ K + N +R C + LNY + + QL Q Sbjct: 490 SMRMYSSDNGDHFMLLSLYLAF----KKVGVNRRKRWCVENALNYKALNTALSTHDQLVQ 545 Query: 604 VV-----KEL-GIPVNSEPAE---------------YREIHIALLTGLLSHIGMKDADKQ 642 KEL G + E + I A L G ++ ++ D Sbjct: 546 YCVGILDKELKGSTAKEQCTEENMKRIINEAIPETIIKSIKKAFLVGFPDNVAIRQPDNT 605 Query: 643 EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 T + I P S + K K+V+ AELV T++ + R ++ E ++ +LI Sbjct: 606 YLTTTQKI-VHIHPSSCVHNKKQKYVLFAELVYTTKPFIRSVLSLESELIQEEMPNLI 662 >UniRef50_A7AU05 Helicase associated domain containing protein n=2 Tax=Piroplasmida RepID=A7AU05_BABBO Length = 668 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 213/672 (31%), Positives = 347/672 (51%), Gaps = 66/672 (9%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 + P+ K +IL ++ QV+++ GETGSGK+T LPKI E G G I TQPRR+AA Sbjct: 6 DFPIWFHKDEILSKLKTSQVLVLTGETGSGKSTLLPKILYENGYG-DSTIVVTQPRRVAA 64 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A +A T+ G +GY VRFS+ S+ T +K +TDG+L E+ D++ +Y ++ Sbjct: 65 ISLARHVASLFNTDLGRLVGYAVRFSNCYSEETRIKYVTDGVLFQEVLDDQIFSRYSVVV 124 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 IDEAHERS+ D LLG L+ + RR DLK++I SAT+ FS F A ++ V GRTYP Sbjct: 125 IDEAHERSIRTDVLLGILRTSIKRRLDLKVVIMSATLKSITFSSFFEGAAVVRVPGRTYP 184 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGERE------------ 302 +++ Y P +E D L+A V +++ GDIL+F+ G+ + Sbjct: 185 LDIYYTPQPQE------DYLEAAMLTVLQINFTYKKGDILVFLPGQDDIETLENMISEKV 238 Query: 303 ------IRDTADALN-KL----------------NLRH---TEILPLYARLSNSEQNRVF 336 I+ T D +N KL +L+H +I+PLYA L +Q++VF Sbjct: 239 EAVKEFIKSTGDQINGKLSKIKKYTEVLLGDTPYDLKHWMELQIVPLYAALPLEQQSKVF 298 Query: 337 Q--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 Q R++VLATN+AETS+T+PGI++V+D G + +S + + L ++ IS+ SA+ Sbjct: 299 QVPGDGCRKVVLATNIAETSVTIPGIRFVVDSGLVKQKLFSVKKCFESLVLQKISKDSAH 358 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GR GR+ G RLY+ + F S PEI TN+A + L++ +G+ + FP + Sbjct: 359 QRAGRAGRMGPGKVFRLYTSEAFNSMRLCRIPEIQCTNVAHIYLELKMIGVHNPLEFPLI 418 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 +AP K + L L A+ T LT +G ++ ++P+ PR AR++L + + C Sbjct: 419 DAPSKNALLSAAMELYRLDALDTKTN-----LTDIGMKMGRIPLLPRHARLLLLSLEFKC 473 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 E + I + LS ++ S + + +K D L+ +N++N + Sbjct: 474 TSEILTIVAMLSTDMTLFTSERHEKESAKMRKNIINKSGDHLSLLNMYNIWNDSPNK--- 530 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE----LGIPVNSEPAEYREIHIALLTGL 630 + CR N + +I QL +V+ + + +P + +E+ + L Sbjct: 531 ---KECCRQFGFNPGAFKRAAEIRNQLVEVLTKRIGVMNVPSCKDSSEWDTVLKCLCRAN 587 Query: 631 LSHIGMKDADKQEYT-GARNARFSIFPGSGLF-KKP-PKWVMVAELVETSRLWGRIAARI 687 ++ D D + Y +N + I P S LF ++P P V+ E T +++ + + I Sbjct: 588 WMNLASLDTDGKSYKLEVQNTKVMIHPHSVLFTRRPCPPLVIFDECSSTKKVYIQNVSEI 647 Query: 688 DPEWVEPVAQHL 699 EWV + +L Sbjct: 648 SHEWVAQLLPNL 659 >UniRef50_B6KSU8 Pre-mRNA splicing factor RNA helicase, putative n=3 Tax=Toxoplasma gondii RepID=B6KSU8_TOXGO Length = 939 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 229/710 (32%), Positives = 342/710 (48%), Gaps = 100/710 (14%) Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 + LP+ + +A+ HQV ++ GETGSGKTTQ+P+ G KG++ TQPRR Sbjct: 228 FAGELPIHGFVDVVRDAVSRHQVTLIVGETGSGKTTQVPQFLHFFGFTQKGVVAVTQPRR 287 Query: 133 LAARTVANRIAEELKTEP-----------------GGCIGYKVRFSDHVSDNTMVKLMTD 175 +AA ++A R++EEL + GG +GY VRF D S T +K +TD Sbjct: 288 VAAVSLARRVSEELSRKQDASSETQEDLPEHNASLGGFVGYCVRFEDCTSAETRIKFLTD 347 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 G+L+ E D +L +Y +++DEAHERSL D LLG++K LLP+R DLK+I+ SAT+D E Sbjct: 348 GMLVREAMLDEMLSRYSVVVLDEAHERSLRTDILLGWMKRLLPKRKDLKVIVMSATLDTE 407 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRP-----IVEEADDT-------------------- 270 +F F A + V GR +PVE+ Y P +E A T Sbjct: 408 KFLGFFPGAQTVLVPGRQFPVELMYTPEPEGDYIEAALITVLQIHTQYPPGDILVFLPGQ 467 Query: 271 -ERDQLQAIFDAVDELSQES-----------------------------HGDILIFMSGE 300 + + LQ I + EL +++ H L + Sbjct: 468 EDIESLQTILEGKQELLRKALCMAASLGAGPAPKTAARSERGGEQRAVPHSKDLSSANCR 527 Query: 301 REIR---DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSL 355 E+R DTA R +I PL+A L Q VF R++++ATN+AETS+ Sbjct: 528 VEVRIGEDTAAVDQLPPCRDLQICPLFAALPFERQKAVFTPAPAGVRKVIVATNIAETSI 587 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TV GI+YV+D G A+ ++RT V+ L IE ISQ +A QR GR GR + G+ R+Y+ED Sbjct: 588 TVQGIRYVVDCGLAKAKCVNHRTGVEALVIEEISQDAAKQRAGRAGREAPGVVFRMYTED 647 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 F PEI+ +L V L++ LG+ + FPF+++P K + R L L A+ Sbjct: 648 TFNKFRPRKVPEIVTCDLDQVFLELKTLGVQNPLEFPFLDSPPKEAFVNAGRTLHRLEAV 707 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ----DPR 531 + Q LT LGR+L+ LP+ P L ++VL++ C E + I + LS R Sbjct: 708 DSRGQ-----LTELGRKLAVLPLKPILGKLVLDSVTFECTAEILSIVAMLSTDSLWYSHR 762 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 P DK RR D + D L +N + E ++ C+ L++ + Sbjct: 763 SLPADKSNRLLHARRRLSDNQGDHLTLLNAYTQWDEATDKIA------FCKEYGLHHNAL 816 Query: 592 REWQDIYTQLRQVV--KELGIP--VNSEPAEYR-EIHIALLTGLLSHIGMKDADKQEY-T 645 + I TQL Q++ ++G+ SE + R +I L G H D++ Y T Sbjct: 817 LRAKQIRTQLEQILLSPQIGVKNVAKSEAPDTRTKIRQCLAAGCWLHTARLQRDQKTYVT 876 Query: 646 GARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 I P S L K P W++ +E V T+R + R I+ W++ Sbjct: 877 TVERETAKIHPSSVLSGQKSLPWWIVYSEYVHTTRPYLRGVTAIEGPWLQ 926 >UniRef50_Q759Y3 ADR140Cp n=2 Tax=Saccharomycetaceae RepID=Q759Y3_ASHGO Length = 709 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 227/698 (32%), Positives = 370/698 (53%), Gaps = 58/698 (8%) Query: 33 GVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRD 92 G K V+ D ++ F MA+ ++ + LR+ A + + LPV + +Q I+E + Sbjct: 20 GPKVVEFRDDEEDQFDGMARRLNASQ----LRQRAAELLKVRETLPVYRHQQSIMEHLNS 75 Query: 93 HQVVIVAGETGSGKTTQLPKICMELGR--GIKGLIGHTQPRRLAARTVANRIAEELKTEP 150 + V I+ GETGSGK+TQLP++ + + KG I TQPRR+AA ++A R+A+E Sbjct: 76 NPVTILIGETGSGKSTQLPQLLLAQLKEEDKKGAIAVTQPRRVAAVSLATRVAQEHGCNL 135 Query: 151 GGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY VRF + T +K +TDG+LL E+ QD+ L +Y ++IDEAHER++ D + Sbjct: 136 GDEVGYSVRFDSCAHPSRTRLKYLTDGMLLRELIQDKNLRKYRYVVIDEAHERTILTDLI 195 Query: 210 LGYLKELL-PRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRY--RPIVEE 266 LG+LK+LL RPDL++++ SAT+ ++FS F+ AP++ V GR +PVE+RY +P + Sbjct: 196 LGFLKQLLRTTRPDLRVLVMSATLQGDKFSAFFDGAPVLFVEGRKFPVEIRYLSQPCEDV 255 Query: 267 ADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN------LRHTEI 320 D R +Q S E GD+L FM G+ EI L K++ + Sbjct: 256 VDAVVRCCVQIN-------SGEQLGDLLCFMPGQEEIDKAVGVLAKISEHLDPGVPRITA 308 Query: 321 LPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 378 LPLYA L +EQ +VF G R+I+L+TN+AETS+T+ G+KYV+D G + + ++ Sbjct: 309 LPLYAALPPAEQAKVFLPLKGFRRKIILSTNIAETSVTIAGVKYVVDTGLRKCKVWRHQL 368 Query: 379 KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVIL 438 + L PIS+ASA+QR GR GR S G C RLY E D+ P ++PEI+R + + +L Sbjct: 369 GLATLLTVPISKASASQRAGRAGRESAGKCFRLYREADYEQLPGQSEPEIVRCDATAPLL 428 Query: 439 QMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPV 498 + +G+ D+ + ++E P + +I G++ L +LGA+ D+ + +T GR+++ LP+ Sbjct: 429 MLKQIGVDDLLNWTWLEHPGRDSIVQGLQELYQLGAL--DDSGA---ITDDGRKMALLPL 483 Query: 499 DPRLARMVLEAQKHGCVREAMIITSALSIQD----PRERPMDKQQASDEKHRRFHDKESD 554 P L+R++LEA+++ C+ + I + LS+ + P D+ A + D Sbjct: 484 APHLSRVLLEARRNHCLPAVLDIVACLSVDNLLLSPPPEARDEVNARRAAACPRGARYGD 543 Query: 555 FLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS 614 L L+++ ++ RRLC + R QL + L + Sbjct: 544 LLMLKELYDHYAALPAPDRADWCRRLCASAR----GFRAAAKTRAQLHRYAAAL-LHWRP 598 Query: 615 EPAE-YREIHI--------ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF---- 661 EPA ++H + L G + ++ D+ T + SI P S LF Sbjct: 599 EPAAPAADLHAPQIAAVVKSFLAGFARNTAIRMPDRSYRTTSHGEPISIHPSSLLFFSTY 658 Query: 662 ------KKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 P ++ E V TS+ + R R++ +W++ Sbjct: 659 AAADRPSAPAPAILYVEYVFTSKGYARGVTRVELDWLQ 696 >UniRef50_A0E003 Chromosome undetermined scaffold_70, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0E003_PARTE Length = 616 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 208/626 (33%), Positives = 338/626 (53%), Gaps = 34/626 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ Q ++ I+++IRD+QV+I+AGETG GKTTQ+P+ E +K I TQPRRLAA Sbjct: 9 LPIFQFREKIIKSIRDNQVIIIAGETGCGKTTQIPQYIYENDPNVK--IAVTQPRRLAAM 66 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI-------QQDRLLM 189 T+A R + E +T+ G IGY VRF D S T + +TDG+L+ E +D+ L Sbjct: 67 TLAERCSLEKQTKLGQLIGYNVRFDDCTSKETQITFLTDGMLIREFIIGIFVDYKDQQLK 126 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YD IIIDEAHER++ D LLG LK L RR LK+I+ SAT+ E+F+ + I + Sbjct: 127 RYDVIIIDEAHERTVQSDLLLGLLKNLCRRRKQLKVILMSATMQIEKFANYLETEAIHII 186 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTAD 308 RT+ V+V PI ++D ++++ + + +L + GDIL F++G+ +I D + Sbjct: 187 EARTHTVDVFNVPI------RQQDYVESMVNTILQLHFTQPEGDILAFLTGQEDIEDVKE 240 Query: 309 AL-NKLNLRHTE----ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 L ++ + + E + LY+ L Q FQ R++VLATN+AETS+T+ GI YV Sbjct: 241 ILIERMKISNQEKQLDVKMLYSALPPEVQLEAFQKSVHRKVVLATNIAETSITIDGIVYV 300 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 +D G +I + + L + P+S+A A QR GR GR +G C RLY++ + ++ Sbjct: 301 VDCGYVKIRSFQIGKAIDTLLLAPVSKAQAEQRAGRAGRQRQGQCYRLYTQQTYERLAKY 360 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 PEILR NL SVILQM A+G+ ++ F ++ PD + + L +L A+ S Sbjct: 361 MLPEILRVNLLSVILQMKAIGIQNVLTFDLIDRPDMELMLANLNQLVKLKALD-----SE 415 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 + LT G+ +S LP++P+ + +++A + G A+ S L +++ +++ + Sbjct: 416 FNLTEHGKNMSSLPLEPQFSHFLIKAYECGIFDLALNSISILQVENLFYFQRGTKESMQK 475 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 +F SD L N+ E Q + C+ + LN+ +++ + QL+ Sbjct: 476 ILAKFKIANSDHLTKANILRKYEETQNK------KSFCKENCLNHKTLQKAMSVKQQLKD 529 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS-IFPGSGLFK 662 +K + I E +Y + L L+ + Q Y + + + I P S LF Sbjct: 530 YMKRI-IKKEFEKEDYDKFKQVLSEALMFKHAVYSPSDQAYKLKQTNQLAYIHPESVLFN 588 Query: 663 KPPKWVMVAELVETSRLWGRIAARID 688 + PK+V+ E++ T +++ R ID Sbjct: 589 QKPKYVIYNEVILTKKVYLRDVTEID 614 >UniRef50_Q8SQW7 Possible PRE-mRNA SPLICING FACTOR (ATP-DEPENDENT RNA HELICASE) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQW7_ENCCU Length = 664 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 170/453 (37%), Positives = 271/453 (59%), Gaps = 14/453 (3%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 + V K +I + QV+++ G+TG GKTT++PK + G I +QPRR+AA Sbjct: 57 VSVEDKMDEIFAKLEKSQVLLIQGDTGCGKTTKIPKYLLRK----YGKIVCSQPRRIAAV 112 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A ++A ++K + G +GY +RF D S T +K +TDG+LL EI+ D+ L +YD +II Sbjct: 113 SIAKKVAVDMKGKIGEDVGYSIRFDDMSSGRTRLKYVTDGVLLREIKNDKHLKKYDVVII 172 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERS+NID LLGYLK +L R DL+++I SAT++ E+F+ F +E+ R +P+ Sbjct: 173 DEAHERSVNIDILLGYLKSILSERKDLRVVIMSATLNSEKFASFFR-CQTVEIRHRMFPL 231 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR 316 E+ + + AD + +A+ V E GDIL+F++G EI + L ++ Sbjct: 232 EIFFLKKSDVADYVD----EAMKTVVQIHRGEESGDILVFLTGRDEINSGREILMEVLGN 287 Query: 317 HTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 376 E+ +Y+ LS EQ VF+ R+IVLATN+AETS+T+ G++YV+D G A+ RYS Sbjct: 288 DAEVCCIYSTLSPEEQEAVFRKTKKRKIVLATNIAETSITIEGVRYVVDSGRAKQMRYSA 347 Query: 377 RTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASV 436 + L + IS+A A QR GR GR G R+YS++++ + T PEI NL + Sbjct: 348 SFGMDILEVVWISKAQAKQRAGRAGRTQAGKVFRMYSKEEYQKMDDNTTPEIFCCNLGKI 407 Query: 437 ILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQL 496 +L++ ++G+ DI F ++ PD N++ + +L L AI D K+T +G + S + Sbjct: 408 VLELKSIGVDDIVNFNLIDKPDASNVKKALEMLYYLRAIGGDG-----KITSIGVKASTI 462 Query: 497 PVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 P+DP LA ++ + + GC+ + II + LS+ + Sbjct: 463 PLDPELAVSLIVSSELGCLEDVSIIAAMLSVGN 495 >UniRef50_B1ZU70 Helicase ATP-dependent domain protein n=5 Tax=Verrucomicrobia RepID=B1ZU70_OPITP Length = 865 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 211/675 (31%), Positives = 337/675 (49%), Gaps = 41/675 (6%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR-GIKGLIGHTQPRR 132 P LP+ + + ++ A+R H +IV TGSGK+TQ+P++ ++ G G +G + QPRR Sbjct: 3 PRELPIYELESAVVSAVRAHGRLIVQAPTGSGKSTQIPQMLLQHGLLGERGEVVVLQPRR 62 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 LAAR +A R+AEE+ + G +GY++R VSD T ++ +T+GILL ++ D L Sbjct: 63 LAARLLAKRVAEEMGSRLGDTVGYQIRLESRVSDRTRIRFVTEGILLRQMSFDASLRGVS 122 Query: 193 TIIIDEAHERSLNIDFLLG-YLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 ++ DE HER L D L L+ RPDLKI++ SAT+D + + G Sbjct: 123 AVVFDEFHERHLYGDISLARALQIQQSTRPDLKILVMSATLDAGALQTYLAPCETLVSQG 182 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDA----VDELSQESHGDILIFMSGEREIRDTA 307 R++PV + Y P D A++D + ++ GD+L+FM G EI T Sbjct: 183 RSFPVRIEYLPKTVNFDH------DAVWDVAARECERIATTQAGDMLVFMPGAYEISRTV 236 Query: 308 DAL-NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDP 366 A+ LR PL+ L Q+R + R+I+++TNVAETSLT+ G+ VID Sbjct: 237 QAIQGSRALRDCVCFPLHGELPPDAQDRAVARYDTRKIIVSTNVAETSLTIEGVTAVIDS 296 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDP 426 G AR++R+ + L IE IS ASA+QR GR GR + G+C+RL++E + R P Sbjct: 297 GLARMARFDPHRGINTLLIEKISAASADQRAGRAGRTAPGVCVRLWTEREHAQRAPQELP 356 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS---- 482 E+ R +LA V+L + A G+ D+A FP++E PD + ++ LL +LGAI +S Sbjct: 357 EVKRLDLAEVVLTLKASGIDDVANFPWLEKPDPKALERAEMLLADLGAIGAATPSSRQDR 416 Query: 483 ---------AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 +T +GR++ + PV PR ARM+L AQ+ GCVR ++ + + R Sbjct: 417 RDEGVAPPGETSITDVGRKMLRFPVHPRYARMLLAAQERGCVRPVALMAALTQGRSFLLR 476 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 + + + + ESDF + W+Y A SN CR ++ R+ Sbjct: 477 GVSRDVDDAREDALGEEHESDFFLLMRAWSY------ADRSNYSLEACRRLGIHAQAARQ 530 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMK-DADKQEYTGARNARF 652 ++ Q ++ ++ G+ V E ++ +L G H+ + DA R Sbjct: 531 VGPLFQQFLEIAEKEGLDVGERRVESSDVRKCVLAGFSDHLAKRLDAGTLRCELVHQRRG 590 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRI------AARIDPEWVEPVAQHLIKRTYSE 706 + S + K P ++ AE+ E G I A I+ W+E + ++T Sbjct: 591 LLARESAIHKAP--LLVAAEISEVEGRGGEINVLLSLATAIEEPWLEEIFPDDYRQTRGV 648 Query: 707 PHWERAQGAVMATEK 721 + E+A+ V E+ Sbjct: 649 VYDEQAKRVVSRRER 663 >UniRef50_Q55EC3 DEAD/DEAH box helicase n=1 Tax=Dictyostelium discoideum RepID=Q55EC3_DICDI Length = 716 Score = 315 bits (807), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 216/683 (31%), Positives = 357/683 (52%), Gaps = 80/683 (11%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG--RGIKGLIGHTQPRRL 133 +LP+ Q ++ IL + + +++ G TG GK+TQ+P+ E G G + ++ TQPRR+ Sbjct: 54 SLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILC-TQPRRV 112 Query: 134 AARTVANRIAEEL-KTEPGGCIGYKVRFSDHVSD-NTMVKLMTDGILLAEIQQDRLLMQY 191 AA ++A R+A+E+ + G +GY VRF + +SD T +K +TDG+L+ E+ D LL++Y Sbjct: 113 AAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPLLLKY 172 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPD----------LKIIITSATIDPERFS--- 238 I+IDEAHERSL D L+G LK++ +R LK+II+SAT++ F Sbjct: 173 SVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFF 232 Query: 239 -------RHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG 291 + + + I+ + GRTYPV++ Y + E + + +Q I +D + + G Sbjct: 233 NYNQTNDKSKDTSTILSIEGRTYPVDIHY--LEESTSNYIQTTIQTI---IDIHTTQPPG 287 Query: 292 DILIFMSGEREIRDTADALN-----------------KLNLRHTEILPLYARLSNSEQNR 334 DIL+F++G+ EI L+ + +LP+Y+ LS ++Q + Sbjct: 288 DILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIK 347 Query: 335 VFQSHSG----RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 VF+S R+I+++TN+AETS+T+ G+ YV+D G +I Y + ++ L I P S+ Sbjct: 348 VFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSK 407 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIA 449 +SANQR GR GR G C RLY+E + P+ T PEI R+NL + ILQ+ ALG+ +I Sbjct: 408 SSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNIL 467 Query: 450 AFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLE 508 F F+ P ++ G+ +L LGA+ D+ KLT P G +++ P DP ++M+++ Sbjct: 468 NFDFISQPPSSSLIRGLEVLYGLGAL--DDNG---KLTNPTGMIMAEFPTDPTFSKMIIQ 522 Query: 509 AQKHG--CVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 + +G C E + IT+ L+IQ Q KH KE D L +N++N Sbjct: 523 SSSNGFNCSDECITITAMLNIQG----LFTNQNHKSRKHLLV--KEGDHLTLLNIFNSF- 575 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS--EPAEYRE--- 621 +S+ + + C +NY ++ + QL K+ I V S + RE Sbjct: 576 -----ISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCFDSNNNREQCS 630 Query: 622 --IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL-FKKPPKWVMVAELVETSR 678 I A+++G ++ D T + + P S L P+WV+ E+ T++ Sbjct: 631 NLIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQWVIFNEVTITTK 690 Query: 679 LWGRIAARIDPEWVEPVAQHLIK 701 + + I+P W+ +A H K Sbjct: 691 EYMKDVTSIEPNWLFEIAPHYYK 713 >UniRef50_Q4PCT7 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PCT7_USTMA Length = 688 Score = 315 bits (807), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 221/637 (34%), Positives = 339/637 (53%), Gaps = 69/637 (10%) Query: 85 DILEAIRDHQVVIVAGETGSGKTTQLPKICMELG-RGIKGLIGHTQPRRLAARTVANRIA 143 IL A+ HQ++IV TGSGKTTQLP+I G G+I TQPRRL+A ++A+R++ Sbjct: 52 SILYALETHQILIVVAATGSGKTTQLPQILYHAGYTSTSGIIACTQPRRLSAISIASRVS 111 Query: 144 EELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERS 203 EL T G +GY +RF D+ S T +K MT G LL E +D LL +Y II+DEAHER Sbjct: 112 SELNTRLGTTVGYTIRFEDNSSAETRIKYMTAGALLRECIRDPLLTRYSVIIVDEAHERQ 171 Query: 204 LNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN---------------APIIE 248 + D LLG LK++L +R +L+++++SATID F R F + +++ Sbjct: 172 VQSDLLLGVLKKILRKRRELRVVVSSATIDALAFKRFFEHDIGGSGSAGDEPEEKVAVLQ 231 Query: 249 VSG-RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTA 307 + G T+PVE+ Y + + DD + ++ I+ L+ E GDIL F++ EI Sbjct: 232 LDGASTFPVEIAY--LKQPCDDWMLETIETIWRI--HLA-EPQGDILAFVTARHEID--- 283 Query: 308 DALNKLNLRHTEILP---------LYARLSNSEQNRVF----QSHSGRRIVLATNVAETS 354 AL L+ R ++ P L+A LS EQN +F H+ R++V+ATN+AE S Sbjct: 284 LALQHLSDRQLDLPPSALKMNLLALHAGLSMDEQNAIFARPLSPHTTRKVVIATNIAEAS 343 Query: 355 LTVPGIKYVIDPGTARI-SRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 +T+ GI YV+D G ++ S S+ + V L +EPIS+ASA QR GR GR + G C RLY+ Sbjct: 344 ITLDGIVYVVDCGLVKVRSAGSHGSCVDSLWLEPISRASATQRAGRAGRTAAGKCFRLYT 403 Query: 414 EDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV-EAPDKRNIQDGVRLLEE 471 E+ FL S E T PE+ R +L++ +L + +LG+ D+ F ++ AP ++ + L Sbjct: 404 EEYFLTSMRETTLPELYRVDLSATVLLLKSLGIDDLVKFDWLPPAPRVTSLASALSSLHS 463 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK--HGCVREAMIITSALSIQD 529 L A+ D+ A +LT +G + +LP+ P LAR+++ + + C +E + I + L++ D Sbjct: 464 LRAL--DDHA---RLTIVGAWMGELPLAPHLARILIASAQPEFACAQEMLSILAMLTVTD 518 Query: 530 P-RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL---GEQQKALSSNAFRRLCRTDY 585 P R + Q S R F +E DFL +N+ G +K + N RL T Sbjct: 519 PFFARDSVETQLSV---RNFAAQEGDFLTLLNILTGFMQNGSSKKWATKN---RLAFTVL 572 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPVN------SEPAEYREIHIALLTGLLSHIGMKDA 639 L +R + +R LGI +N P I L TGL +++ +A Sbjct: 573 HRALNIRSQLSRFL-VRFSSHPLGITLNPTSSVLDHPTARESITKCLCTGLYANLARYNA 631 Query: 640 DKQEYTGARNARFSIFPGSGLFKKPPK----WVMVAE 672 YT + + P S LF + P+ W++ + Sbjct: 632 ATMSYTSTSAHQLHVHPSSVLFNRQPQQGKFWIIFSH 668 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P43329 ATP-dependent RNA helicase hrpA n=101 Tax=Bacter... 1908 0.0 UniRef50_B7VPK9 ATP-dependent helicase n=201 Tax=Bacteria RepID=... 1768 0.0 UniRef50_Q65SL6 HrpA protein n=9 Tax=Pasteurellaceae RepID=Q65SL... 1744 0.0 UniRef50_P45018 ATP-dependent RNA helicase hrpA homolog n=53 Tax... 1729 0.0 UniRef50_Q47MH0 ATP-dependent helicase HrpA n=13 Tax=Bacteria Re... 1693 0.0 UniRef50_Q3JBJ6 ATP-dependent helicase HrpA n=3 Tax=Chromatiacea... 1653 0.0 UniRef50_A4X5M6 ATP-dependent helicase HrpA n=6 Tax=Actinomyceta... 1636 0.0 UniRef50_B5GG28 ATP-dependent helicase n=3 Tax=Streptomyces RepI... 1615 0.0 UniRef50_Q482P9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1583 0.0 UniRef50_A1U107 ATP-dependent helicase HrpA n=4 Tax=Gammaproteob... 1582 0.0 UniRef50_B9Z2A4 ATP-dependent helicase HrpA n=1 Tax=Lutiella nit... 1581 0.0 UniRef50_Q21LQ8 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1556 0.0 UniRef50_Q1N0P2 ATP-dependent helicase HrpA n=1 Tax=Bermanella m... 1551 0.0 UniRef50_Q0A864 ATP-dependent helicase HrpA n=9 Tax=Gammaproteob... 1550 0.0 UniRef50_Q0S1M3 ATP-dependent helicase hrpA n=5 Tax=Corynebacter... 1547 0.0 UniRef50_A6VYA9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1537 0.0 UniRef50_Q2Y975 ATP-dependent helicase HrpA n=2 Tax=Proteobacter... 1534 0.0 UniRef50_Q0F3B4 ATP-dependent helicase HrpA n=1 Tax=Mariprofundu... 1528 0.0 UniRef50_Q47AH6 ATP-dependent helicase HrpA n=7 Tax=Betaproteoba... 1522 0.0 UniRef50_B5JXZ9 ATP-dependent helicase HrpA n=1 Tax=gamma proteo... 1521 0.0 UniRef50_A9WQ04 ATP-dependent helicase n=1 Tax=Renibacterium sal... 1518 0.0 UniRef50_A4VNQ0 ATP-dependent helicase HrpA n=32 Tax=Proteobacte... 1514 0.0 UniRef50_A3YEF6 ATP-dependent helicase HrpA n=1 Tax=Marinomonas ... 1510 0.0 UniRef50_D1VDH3 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. ... 1509 0.0 UniRef50_Q1QXI6 ATP-dependent helicase HrpA n=17 Tax=Gammaproteo... 1507 0.0 UniRef50_B0RGP0 ATP-dependent helicase n=3 Tax=Actinobacteria (c... 1504 0.0 UniRef50_C5BR02 ATP-dependent helicase HrpA n=1 Tax=Teredinibact... 1503 0.0 UniRef50_B2U9W9 ATP-dependent helicase HrpA n=11 Tax=Betaproteob... 1501 0.0 UniRef50_C1DAE5 HrpA n=2 Tax=Betaproteobacteria RepID=C1DAE5_LARHH 1500 0.0 UniRef50_A4BTJ3 ATP-dependent helicase HrpA n=1 Tax=Nitrococcus ... 1492 0.0 UniRef50_B2GLW1 ATP-dependent RNA helicase HrpA n=7 Tax=Bacteria... 1478 0.0 UniRef50_A6C1G8 ATP-dependent helicase HrpA n=1 Tax=Planctomyces... 1476 0.0 UniRef50_B9ZMZ4 ATP-dependent helicase HrpA n=1 Tax=Thioalkalivi... 1474 0.0 UniRef50_C8NU49 ATP-dependent helicase HrpA n=8 Tax=Corynebacter... 1474 0.0 UniRef50_D2S4R8 ATP-dependent helicase HrpA n=1 Tax=Geodermatoph... 1470 0.0 UniRef50_Q3SHC5 ATP-dependent helicase HrpA n=3 Tax=Betaproteoba... 1470 0.0 UniRef50_B2JJC7 ATP-dependent helicase HrpA n=89 Tax=cellular or... 1467 0.0 UniRef50_C0VVM1 HrpA family ATP-dependent helicase n=2 Tax=Coryn... 1458 0.0 UniRef50_Q31H28 ATP-dependent helicase HrpA n=1 Tax=Thiomicrospi... 1456 0.0 UniRef50_Q1YSZ9 ATP-dependent helicase HrpA n=2 Tax=unclassified... 1454 0.0 UniRef50_D2NU22 HrpA-like helicase n=4 Tax=Bacteria RepID=D2NU22... 1453 0.0 UniRef50_C4LJ32 Putative ATP-dependent helicase n=1 Tax=Coryneba... 1442 0.0 UniRef50_C5CA12 ATP-dependent helicase HrpA n=5 Tax=Micrococcace... 1438 0.0 UniRef50_C8X757 ATP-dependent helicase HrpA n=1 Tax=Nakamurella ... 1427 0.0 UniRef50_D0LBQ9 ATP-dependent helicase HrpA n=2 Tax=Corynebacter... 1425 0.0 UniRef50_C8RTL0 ATP-dependent helicase n=4 Tax=cellular organism... 1424 0.0 UniRef50_C7ME24 ATP-dependent helicase HrpA n=1 Tax=Brachybacter... 1423 0.0 UniRef50_A0L8U8 ATP-dependent helicase HrpA n=1 Tax=Magnetococcu... 1419 0.0 UniRef50_C1ZJL9 ATP-dependent helicase HrpA n=1 Tax=Planctomyces... 1416 0.0 UniRef50_A0Z814 Helicase, ATP-dependent n=3 Tax=unclassified Gam... 1390 0.0 UniRef50_C7NIQ1 ATP-dependent helicase HrpA n=1 Tax=Kytococcus s... 1390 0.0 UniRef50_D1BIN2 ATP-dependent helicase HrpA n=1 Tax=Sanguibacter... 1387 0.0 UniRef50_A4SYB1 ATP-dependent helicase HrpA n=1 Tax=Polynucleoba... 1380 0.0 UniRef50_D0WKL4 ATP-dependent helicase HrpA n=1 Tax=Actinomyces ... 1379 0.0 UniRef50_A9GK92 ATP-dependent helicase HrpA n=2 Tax=Myxococcales... 1374 0.0 UniRef50_B8FCF5 ATP-dependent helicase HrpA n=1 Tax=Desulfatibac... 1374 0.0 UniRef50_Q0VPC9 ATP-dependent helicase HrpA n=2 Tax=Alcanivorax ... 1374 0.0 UniRef50_B8KHJ8 ATP-dependent helicase HrpA n=1 Tax=gamma proteo... 1371 0.0 UniRef50_B0TXK9 HrpA-like helicase n=2 Tax=Francisella philomira... 1357 0.0 UniRef50_A5EVC9 ATP-dependent helicase HrpA n=1 Tax=Dichelobacte... 1354 0.0 UniRef50_B6BTD8 ATP-dependent helicase HrpA n=2 Tax=Betaproteoba... 1354 0.0 UniRef50_C7RBD8 ATP-dependent helicase HrpA n=1 Tax=Kangiella ko... 1353 0.0 UniRef50_B7GWG2 ATP-dependent helicase HrpA n=17 Tax=Acinetobact... 1352 0.0 UniRef50_C0QAN7 HrpA n=1 Tax=Desulfobacterium autotrophicum HRM2... 1345 0.0 UniRef50_Q2LSZ0 ATP-dependent helicase n=1 Tax=Syntrophus acidit... 1340 0.0 UniRef50_C7QZ06 ATP-dependent helicase HrpA n=1 Tax=Jonesia deni... 1339 0.0 UniRef50_A6WCM9 ATP-dependent helicase HrpA n=5 Tax=Bacteria Rep... 1337 0.0 UniRef50_D2R0M6 ATP-dependent helicase HrpA n=1 Tax=Pirellula st... 1334 0.0 UniRef50_A0LMI5 ATP-dependent helicase HrpA n=1 Tax=Syntrophobac... 1334 0.0 UniRef50_D0KXD2 ATP-dependent helicase HrpA n=1 Tax=Halothiobaci... 1325 0.0 UniRef50_C8N990 ATP-dependent helicase HrpA n=1 Tax=Cardiobacter... 1319 0.0 UniRef50_A8ZWI2 ATP-dependent helicase HrpA n=1 Tax=Desulfococcu... 1317 0.0 UniRef50_A5WE54 ATP-dependent helicase HrpA n=4 Tax=Moraxellacea... 1300 0.0 UniRef50_C8QXF3 ATP-dependent helicase HrpA n=1 Tax=Desulfurivib... 1297 0.0 UniRef50_Q7USX6 ATP-dependent helicase hrpA n=1 Tax=Rhodopirellu... 1283 0.0 UniRef50_A8L7U0 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. ... 1263 0.0 UniRef50_Q1H207 ATP-dependent helicase HrpA n=3 Tax=Methylophila... 1249 0.0 UniRef50_Q1NTJ0 ATP-dependent helicase HrpA n=2 Tax=delta proteo... 1230 0.0 UniRef50_Q6AL39 Related to ATP-dependent helicase HrpA n=1 Tax=D... 1208 0.0 UniRef50_D1N0X8 ATP-dependent helicase HrpA n=1 Tax=Victivallis ... 1197 0.0 UniRef50_B2UQA6 ATP-dependent helicase HrpA n=1 Tax=Akkermansia ... 1193 0.0 UniRef50_C2KSU4 HrpA family ATP-dependent helicase n=3 Tax=Mobil... 1184 0.0 UniRef50_Q12AX3 ATP-dependent helicase HrpA n=1 Tax=Polaromonas ... 1181 0.0 UniRef50_B1ZWH7 ATP-dependent helicase HrpA n=2 Tax=Opitutaceae ... 1179 0.0 UniRef50_C4KC73 ATP-dependent helicase HrpA n=1 Tax=Thauera sp. ... 1172 0.0 UniRef50_B3DQA9 HrpA-like helicase n=21 Tax=Bifidobacteriaceae R... 1141 0.0 UniRef50_D1BTV1 ATP-dependent helicase HrpA n=4 Tax=Bacteria Rep... 1123 0.0 UniRef50_C5BVQ3 ATP-dependent helicase HrpA n=3 Tax=Bacteria Rep... 1112 0.0 UniRef50_A3M3Z2 ATP-dependent helicase n=1 Tax=Acinetobacter bau... 1099 0.0 UniRef50_C1RH11 ATP-dependent helicase HrpA (Fragment) n=1 Tax=C... 1090 0.0 UniRef50_C0VY42 HrpA family ATP-dependent helicase n=1 Tax=Actin... 1064 0.0 UniRef50_D0W5V2 ATP-dependent helicase HrpA n=3 Tax=Neisseria Re... 984 0.0 UniRef50_B4CU07 Helicase-associated domain protein n=2 Tax=Verru... 928 0.0 UniRef50_Q1C7D5 ATP-dependent helicase HrpA n=4 Tax=Bacteria Rep... 883 0.0 UniRef50_Q09530 Probable pre-mRNA-splicing factor ATP-dependent ... 869 0.0 UniRef50_B5JKC1 ATP-dependent helicase HrpA n=5 Tax=Bacteria Rep... 865 0.0 UniRef50_Q14562 ATP-dependent RNA helicase DHX8 n=78 Tax=Eukaryo... 860 0.0 UniRef50_Q7PT33 AGAP007212-PA n=4 Tax=cellular organisms RepID=Q... 860 0.0 UniRef50_Q6BRT9 DEHA2D13882p n=8 Tax=Saccharomycetales RepID=Q6B... 852 0.0 UniRef50_Q0RE57 ATP dependent RNA helicase n=10 Tax=Bacteria Rep... 851 0.0 UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helic... 850 0.0 UniRef50_C9RLX0 Helicase-associated domain protein n=1 Tax=Fibro... 849 0.0 UniRef50_B6ADS3 DHX8/prp22-type ATP-dependent RNA helicase, puta... 849 0.0 UniRef50_C0NP73 ATP-dependent RNA helicase DHX8 n=10 Tax=Dikarya... 849 0.0 UniRef50_C4QEZ9 ATP-dependent RNA Helicase, putative n=21 Tax=Eu... 848 0.0 UniRef50_A7AWE8 RNA helicase, putative n=2 Tax=Piroplasmida RepI... 846 0.0 UniRef50_Q54MH3 Putative pre-mRNA-splicing factor ATP-dependent ... 841 0.0 UniRef50_O22899 Probable pre-mRNA-splicing factor ATP-dependent ... 840 0.0 UniRef50_C5KUX0 ATP-dependent RNA helicase DHX8, putative n=1 Ta... 837 0.0 UniRef50_C4M6S9 Helicase, putative n=3 Tax=Entamoeba RepID=C4M6S... 836 0.0 UniRef50_B2ANS3 Predicted CDS Pa_6_9920 n=3 Tax=Saccharomyceta R... 829 0.0 UniRef50_A9C368 ATP-dependent helicase HrpA n=13 Tax=cellular or... 823 0.0 UniRef50_A0D4B2 Chromosome undetermined scaffold_37, whole genom... 819 0.0 UniRef50_C4QXH4 DEAH-box RNA-dependent ATPase/ATP-dependent RNA ... 819 0.0 UniRef50_Q6P404 DEAH (Asp-Glu-Ala-His) box polypeptide 38 n=9 Ta... 818 0.0 UniRef50_B0JZ95 Dhx16 protein n=5 Tax=Fungi/Metazoa group RepID=... 817 0.0 UniRef50_Q75EQ9 AAR020Wp n=2 Tax=Saccharomycetaceae RepID=Q75EQ9... 815 0.0 UniRef50_Q54NJ4 Putative pre-mRNA-splicing factor ATP-dependent ... 814 0.0 UniRef50_Q5KGT3 Pre-mRNA splicing factor, putative n=7 Tax=Dikar... 814 0.0 UniRef50_Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helic... 813 0.0 UniRef50_C0SAG2 Pre-mRNA-splicing factor ATP-dependent RNA helic... 812 0.0 UniRef50_C0W5B9 Putative uncharacterized protein (Fragment) n=1 ... 810 0.0 UniRef50_C4Y9K0 Putative uncharacterized protein n=1 Tax=Clavisp... 808 0.0 UniRef50_Q10752 Pre-mRNA-splicing factor ATP-dependent RNA helic... 805 0.0 UniRef50_P53131 Pre-mRNA-splicing factor ATP-dependent RNA helic... 802 0.0 UniRef50_O45244 Probable pre-mRNA-splicing factor ATP-dependent ... 801 0.0 UniRef50_B6AI28 Pre-mRNA-processing protein 8, putative n=1 Tax=... 799 0.0 UniRef50_D1H6K3 Whole genome shotgun sequence of line PN40024, s... 798 0.0 UniRef50_A7ASE9 RNA helicase, putative n=1 Tax=Babesia bovis Rep... 798 0.0 UniRef50_A3FQE8 Putative uncharacterized protein n=2 Tax=Cryptos... 797 0.0 UniRef50_Q5CYX6 Prp16p pre-mRNA splicing factor. HrpA family SFI... 797 0.0 UniRef50_A2EVN8 Helicase, putative n=1 Tax=Trichomonas vaginalis... 797 0.0 UniRef50_O60231 Putative pre-mRNA-splicing factor ATP-dependent ... 794 0.0 UniRef50_B6AHK6 Pre-mRNA-splicing factor ATP-dependent RNA helic... 790 0.0 UniRef50_B3L2J4 Atp-dependant rna helicase, putative n=1 Tax=Pla... 790 0.0 UniRef50_Q9P774 Pre-mRNA-splicing factor ATP-dependent RNA helic... 789 0.0 UniRef50_B6JZW3 ATP-dependent RNA helicase Prp16 n=1 Tax=Schizos... 786 0.0 UniRef50_Q7XIR8 Os07g0508000 protein n=4 Tax=Embryophyta RepID=Q... 784 0.0 UniRef50_A7AVM7 DEAH box RNA helicase, putative n=3 Tax=Piroplas... 784 0.0 UniRef50_C4JEY7 ATP-dependent RNA helicase DHX8 n=25 Tax=cellula... 784 0.0 UniRef50_D2JWV9 Putative pre-mRNA splicing factor n=1 Tax=Filoba... 783 0.0 UniRef50_Q55CD3 DEAD/DEAH box helicase n=2 Tax=Eukaryota RepID=Q... 782 0.0 UniRef50_Q03319 Probable ATP-dependent RNA helicase prh1 n=2 Tax... 782 0.0 UniRef50_B0ECA9 Pre-mRNA-splicing factor ATP-dependent RNA helic... 782 0.0 UniRef50_A2EN72 Helicase, putative n=1 Tax=Trichomonas vaginalis... 782 0.0 UniRef50_Q9H5Z1 Probable ATP-dependent RNA helicase DHX35 n=44 T... 781 0.0 UniRef50_C5X1W0 Putative uncharacterized protein Sb01g037170 n=2... 781 0.0 UniRef50_C0H5K5 Splicing factor, putative n=2 Tax=Plasmodium fal... 781 0.0 UniRef50_C4QXR9 Putative uncharacterized protein n=1 Tax=Pichia ... 780 0.0 UniRef50_A9US44 Predicted protein n=1 Tax=Monosiga brevicollis R... 776 0.0 UniRef50_Q759P9 ADR224Wp n=2 Tax=Saccharomycetaceae RepID=Q759P9... 773 0.0 UniRef50_Q6FTI2 Strain CBS138 chromosome G complete sequence n=1... 772 0.0 UniRef50_C5DJP0 KLTH0F17974p n=2 Tax=Saccharomycetaceae RepID=C5... 771 0.0 UniRef50_Q6A8Y5 ATP-dependent helicase HrpA n=3 Tax=Propionibact... 769 0.0 UniRef50_D1ZEJ8 Whole genome shotgun sequence assembly, scaffold... 766 0.0 UniRef50_UPI000186CCEB ATP-dependent RNA helicase, putative n=1 ... 765 0.0 UniRef50_A5AMC2 Putative uncharacterized protein n=2 Tax=Eukaryo... 763 0.0 UniRef50_Q9H6R0 Putative ATP-dependent RNA helicase DHX33 n=37 T... 758 0.0 UniRef50_A5DRX8 Putative uncharacterized protein n=1 Tax=Loddero... 757 0.0 UniRef50_Q6CF95 YALI0B09053p n=1 Tax=Yarrowia lipolytica RepID=Q... 757 0.0 UniRef50_P15938 Pre-mRNA-splicing factor ATP-dependent RNA helic... 757 0.0 UniRef50_C5LYU2 ATP-dependent RNA helicase DHX8, putative n=1 Ta... 756 0.0 UniRef50_D1IUD7 Whole genome shotgun sequence of line PN40024, s... 755 0.0 UniRef50_Q9VR29 CG3225 n=19 Tax=Neoptera RepID=Q9VR29_DROME 754 0.0 UniRef50_Q5ANN5 Likely spliceosomal DEAD box ATPase n=3 Tax=Euka... 753 0.0 UniRef50_B9WL64 Pre-mRNA-splicing factor ATP-dependent RNA helic... 753 0.0 UniRef50_B9WE17 Pre-mRNA-splicing factor ATP-dependent RNA helic... 753 0.0 UniRef50_B9H2M0 Predicted protein n=9 Tax=Embryophyta RepID=B9H2... 753 0.0 UniRef50_Q9BKQ8 Probable ATP-dependent RNA helicase DHX35 homolo... 749 0.0 UniRef50_D0MZQ2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 743 0.0 UniRef50_Q5KMH9 Pre-mRNA splicing factor, putative n=4 Tax=Fungi... 741 0.0 UniRef50_Q9FZC3 T1K7.25 protein n=12 Tax=Embryophyta RepID=Q9FZC... 741 0.0 UniRef50_Q4N829 RNA helicase, putative n=2 Tax=Theileria RepID=Q... 741 0.0 UniRef50_A8IHD9 DEAH-box nuclear pre-mRNA splicing factor n=2 Ta... 740 0.0 UniRef50_A7E6W3 Putative uncharacterized protein n=1 Tax=Sclerot... 740 0.0 UniRef50_A5DQ95 Putative uncharacterized protein n=2 Tax=Pichia ... 739 0.0 UniRef50_UPI0001925C54 PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 735 0.0 UniRef50_B3SBV6 Putative uncharacterized protein n=2 Tax=Fungi/M... 735 0.0 UniRef50_UPI000050FFFD ATP-dependent helicase n=1 Tax=Brevibacte... 734 0.0 UniRef50_B4JQ72 GH13648 n=1 Tax=Drosophila grimshawi RepID=B4JQ7... 734 0.0 UniRef50_A4S4Y0 Predicted protein n=3 Tax=Mamiellales RepID=A4S4... 733 0.0 UniRef50_Q9VL25 CG4901 n=10 Tax=Drosophila RepID=Q9VL25_DROME 727 0.0 UniRef50_Q0UY60 Putative uncharacterized protein n=1 Tax=Phaeosp... 723 0.0 UniRef50_Q38AN5 Pre-mRNA splicing factor ATP-dependent RNA helic... 719 0.0 UniRef50_A2D7A5 Helicase, putative n=1 Tax=Trichomonas vaginalis... 718 0.0 UniRef50_C4LWD6 Helicase, putative n=10 Tax=Eukaryota RepID=C4LW... 718 0.0 UniRef50_A2DQS5 Helicase, putative n=1 Tax=Trichomonas vaginalis... 718 0.0 UniRef50_A5E397 Putative uncharacterized protein n=1 Tax=Loddero... 715 0.0 UniRef50_B6H7B9 Pc16g02360 protein n=34 Tax=Leotiomyceta RepID=B... 715 0.0 UniRef50_Q55EC3 DEAD/DEAH box helicase n=1 Tax=Dictyostelium dis... 710 0.0 UniRef50_B0ECZ2 ATP-dependent RNA helicase, putative n=2 Tax=Ent... 708 0.0 UniRef50_P20095 Pre-mRNA-splicing factor ATP-dependent RNA helic... 707 0.0 UniRef50_C3YFD5 Putative uncharacterized protein n=1 Tax=Branchi... 705 0.0 UniRef50_UPI0001792F5D PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 703 0.0 UniRef50_A4RXZ6 Predicted protein n=7 Tax=Eukaryota RepID=A4RXZ6... 698 0.0 UniRef50_D2UEZ1 Putative atp-dependent helicase protein n=1 Tax=... 698 0.0 UniRef50_C9ZMN0 ATP-dependent RNA helicase, putative n=4 Tax=Try... 696 0.0 UniRef50_B0CX49 Predicted protein n=2 Tax=Agaricales RepID=B0CX4... 696 0.0 UniRef50_UPI0000DB6CD8 PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 695 0.0 UniRef50_A7NAU7 ATP-dependent helicase n=16 Tax=Francisella RepI... 694 0.0 UniRef50_B8C4C7 Atp-dependent RNA helicase n=1 Tax=Thalassiosira... 694 0.0 UniRef50_Q8IX18 Probable ATP-dependent RNA helicase DHX40 n=31 T... 693 0.0 UniRef50_B2SSX2 ATP-dependent helicase HrpA n=13 Tax=Xanthomonad... 693 0.0 UniRef50_C5DCP1 KLTH0B04664p n=2 Tax=Saccharomycetales RepID=C5D... 691 0.0 UniRef50_B3LCV7 ATP-dependent RNA helicase, putative n=3 Tax=Pla... 690 0.0 UniRef50_C1E1Z9 Predicted protein n=2 Tax=Micromonas RepID=C1E1Z... 689 0.0 UniRef50_Q4UH89 ATP-dependent helicase, putative n=2 Tax=Theiler... 686 0.0 UniRef50_P36009 Probable ATP-dependent RNA helicase DHR2 n=16 Ta... 686 0.0 UniRef50_Q87DR2 ATP-dependent helicase n=8 Tax=Xylella fastidios... 685 0.0 UniRef50_A2DDS9 Helicase, putative n=2 Tax=Trichomonas vaginalis... 681 0.0 UniRef50_Q2GVT0 Putative uncharacterized protein n=2 Tax=Sordari... 680 0.0 UniRef50_Q22YX8 Putative uncharacterized protein n=1 Tax=Tetrahy... 680 0.0 UniRef50_Q4QAM3 Pre-mRNA splicing factor, putative n=6 Tax=Trypa... 679 0.0 UniRef50_A8XFV1 Putative uncharacterized protein n=2 Tax=Caenorh... 679 0.0 UniRef50_O01598 Putative uncharacterized protein T05E8.3 n=1 Tax... 679 0.0 UniRef50_A2F2U1 Putative uncharacterized protein n=2 Tax=Trichom... 678 0.0 UniRef50_D0A429 Pre-mRNA splicing factor ATP-dependent RNA helic... 675 0.0 UniRef50_C8PMN0 ATP-dependent RNA helicase HrpA n=1 Tax=Treponem... 675 0.0 UniRef50_B5RU49 DEHA2E21340p n=4 Tax=Saccharomycetales RepID=B5R... 673 0.0 UniRef50_B6K8E7 Pre-mRNA-splicing factor ATP-dependent RNA helic... 672 0.0 UniRef50_C4Y8X8 Putative uncharacterized protein n=1 Tax=Clavisp... 672 0.0 UniRef50_A7AU05 Helicase associated domain containing protein n=... 672 0.0 UniRef50_A8PRC9 DEAH, putative n=1 Tax=Brugia malayi RepID=A8PRC... 671 0.0 UniRef50_Q4Q2X4 ATP-dependent RNA helicase-like protein n=3 Tax=... 670 0.0 UniRef50_UPI0001BCCC41 ATP-dependent helicase HrpA n=1 Tax=Aerom... 669 0.0 UniRef50_A4RR62 Predicted protein n=3 Tax=Mamiellales RepID=A4RR... 667 0.0 UniRef50_Q22ZC0 Putative uncharacterized protein n=1 Tax=Tetrahy... 666 0.0 UniRef50_Q8SQW7 Possible PRE-mRNA SPLICING FACTOR (ATP-DEPENDENT... 664 0.0 UniRef50_B7PNN0 ATP-dependent RNA helicase, putative (Fragment) ... 661 0.0 UniRef50_D0NMK0 Pre-mRNA-splicing factor ATP-dependent RNA helic... 661 0.0 UniRef50_Q3LVV7 Putative pre-mRNA splicing factor n=1 Tax=Bigelo... 658 0.0 UniRef50_Q9HE06 Putative pre-mRNA-splicing factor ATP-dependent ... 656 0.0 UniRef50_Q8SQQ2 PRE-mRNA SPLICING FACTOR (DEAD box family) n=1 T... 656 0.0 UniRef50_A5DZ49 Pre-mRNA splicing factor ATP-dependent RNA helic... 656 0.0 UniRef50_Q4E099 ATP-dependent DEAD/H RNA helicase, putative n=5 ... 654 0.0 UniRef50_Q4Q0J4 RNA helicase, putative n=7 Tax=Trypanosomatidae ... 646 0.0 UniRef50_B2S1H1 ATP-dependent protease La n=22 Tax=Borrelia RepI... 646 0.0 UniRef50_Q4N5J8 RNA helicase, putative n=1 Tax=Theileria parva R... 645 0.0 UniRef50_A0E003 Chromosome undetermined scaffold_70, whole genom... 644 0.0 UniRef50_B6H9G3 Pc16g10890 protein n=15 Tax=Leotiomyceta RepID=B... 643 0.0 UniRef50_D2A3P7 Putative uncharacterized protein GLEAN_15731 n=1... 639 0.0 UniRef50_B6K0W8 Pre-mRNA-splicing factor ATP-dependent RNA helic... 638 0.0 UniRef50_Q16ZW5 ATP-dependent RNA helicase n=11 Tax=Eukaryota Re... 638 0.0 UniRef50_Q9DBV3 Probable ATP-dependent RNA helicase DHX34 n=23 T... 637 e-180 UniRef50_B6KSU8 Pre-mRNA splicing factor RNA helicase, putative ... 634 e-180 UniRef50_B7FZA2 Predicted protein n=1 Tax=Phaeodactylum tricornu... 634 e-180 UniRef50_Q3LWK5 Spliceosome dissassembly protein PRP43 n=2 Tax=C... 633 e-179 UniRef50_A4ICP7 DEAH-box RNA helicase, putative n=4 Tax=Trypanos... 632 e-179 UniRef50_Q5KNB9 ATP-dependent RNA helicase prh1, putative n=1 Ta... 629 e-178 UniRef50_B2S3B9 ATP-dependent helicase n=3 Tax=Treponema RepID=B... 628 e-178 Sequences not found previously or not previously below threshold: >UniRef50_P43329 ATP-dependent RNA helicase hrpA n=101 Tax=Bacteria RepID=HRPA_ECOLI Length = 1300 Score = 1908 bits (4943), Expect = 0.0, Method: Composition-based stats. Identities = 1300/1300 (100%), Positives = 1300/1300 (100%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK Sbjct: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG Sbjct: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA Sbjct: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH Sbjct: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE Sbjct: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI Sbjct: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR Sbjct: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ Sbjct: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA Sbjct: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ Sbjct: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL Sbjct: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE Sbjct: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE Sbjct: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA Sbjct: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR Sbjct: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW Sbjct: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW Sbjct: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 Query: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS Sbjct: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 Query: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK Sbjct: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG Sbjct: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED Sbjct: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG Sbjct: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 >UniRef50_B7VPK9 ATP-dependent helicase n=201 Tax=Bacteria RepID=B7VPK9_VIBSL Length = 1355 Score = 1768 bits (4580), Expect = 0.0, Method: Composition-based stats. Identities = 901/1305 (69%), Positives = 1090/1305 (83%), Gaps = 9/1305 (0%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 T+ + + +L++ L M+RDR R S+R+ G K+KN ++ A+F E+A +I ++ Sbjct: 50 TKSSQNSPVSLRKALHECMMRDRFRLSKRITGASKIKNEQSKHAVFDEIALDIAKSMMTA 109 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R A +P I YP+ LPVSQK+ DI +AI ++QVVIVAGETGSGKTTQLPKIC ELGRG Sbjct: 110 TQRAAQKPTIEYPEILPVSQKRDDIAKAIAENQVVIVAGETGSGKTTQLPKICSELGRGR 169 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 GLIGHTQPRRLAAR+VANRIAEE++T+ G +GYKVRF+D +S+NT +KLMTDGILLAE Sbjct: 170 FGLIGHTQPRRLAARSVANRIAEEMETQLGEFVGYKVRFNDQISENTQIKLMTDGILLAE 229 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQ DR L QYDTIIIDEAHERSLNIDF++GYL+ELLP+RPDLK+IITSATIDPERFS+HF Sbjct: 230 IQHDRFLSQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHF 289 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGER 301 NNAPIIEVSGRTYPV+ RYRP+ + D++RDQ++ IF+AVDEL E GDILIFM+GER Sbjct: 290 NNAPIIEVSGRTYPVDTRYRPLGGDDSDSDRDQIEGIFEAVDELCDEGQGDILIFMNGER 349 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 EIRDTAD+L+K NLR TEI+PLYARLS EQNR+FQSH+GRRIVLATNVAETSLTVPGIK Sbjct: 350 EIRDTADSLSKRNLRDTEIVPLYARLSAGEQNRIFQSHTGRRIVLATNVAETSLTVPGIK 409 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVIDPGTARISRYSYRTKVQRLPIEP+SQASANQRKGRCGRV+EGICIRLYSE+DF SRP Sbjct: 410 YVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVAEGICIRLYSEEDFESRP 469 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI------ 475 EFTDPEILRTNLASVILQMTALGLGDI AFPFVEAPDKRNIQDGVRLLEELGAI Sbjct: 470 EFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDKRNIQDGVRLLEELGAIAIVEPS 529 Query: 476 ---TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 + KLT +GR+L++LP+DPRLARMV+EA + C+ E M+I SALSIQDPRE Sbjct: 530 ANKNKNHGDDKKKLTAIGRKLAKLPIDPRLARMVIEAPSNRCLHEVMVIASALSIQDPRE 589 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP DKQQ+SD+KH+RF DKESDF+ FVNLW+Y+ +QQKALSSN FR+ C+ DYLNYLR+R Sbjct: 590 RPSDKQQSSDDKHKRFFDKESDFITFVNLWDYVKQQQKALSSNQFRKQCKQDYLNYLRIR 649 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 EWQD+Y Q+ Q ++EL +N+EP Y IH++LL+GLLSHIGMKD +K EY GARNARF Sbjct: 650 EWQDVYFQIHQAMRELDTKLNTEPGSYDGIHMSLLSGLLSHIGMKDQEKNEYQGARNARF 709 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 IFP SGLFKK PKW+M AELVETS+LWGR+ A+I PEW+EP+A+HLIKR+YSEPHW + Sbjct: 710 HIFPASGLFKKQPKWIMSAELVETSKLWGRVIAKIQPEWIEPLAKHLIKRSYSEPHWSKK 769 Query: 713 QGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKL 772 Q AVMA EKV +YG+PI+ R VNY ID + RELF+R ALVEG+W+T+HAFF++N KL Sbjct: 770 QAAVMAHEKVMLYGIPIIPKRLVNYGAIDATVSRELFVRSALVEGEWETKHAFFKQNRKL 829 Query: 773 RAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEK 832 EVEELEHKSRRRDIL+DD+ LF+FYDQR+ + +S RHFD+WWKK S++TP+LLNFEK Sbjct: 830 LQEVEELEHKSRRRDILIDDDELFDFYDQRVGEEAVSGRHFDTWWKKTSQKTPELLNFEK 889 Query: 833 SMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFE 892 SML + A ++ LDYPNFWHQ +KL+LSYQFEPG D DGVTVHIPLP+LNQ++++GF+ Sbjct: 890 SMLFRGDASHVTDLDYPNFWHQNGIKLKLSYQFEPGDDNDGVTVHIPLPILNQIDQNGFD 949 Query: 893 WQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG 952 WQIPGLR+ELVI+LIKSLPK +RRNFVPAPNYA+AFL RV PLE PLLDSLE+ELRRMTG Sbjct: 950 WQIPGLRQELVISLIKSLPKTLRRNFVPAPNYADAFLARVTPLEAPLLDSLEKELRRMTG 1009 Query: 953 VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI 1012 V V R+DW DQ+P+HLK+TFR VD + +KLKE + L +LK++LK KVQETLS VADD I Sbjct: 1010 VEVVRDDWKLDQIPEHLKVTFRAVDHRKRKLKEQKDLHELKESLKDKVQETLSKVADDDI 1069 Query: 1013 EQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRR 1072 EQ LH WSFG+LP+ Y+QKRG Y VKA+PALVD +DSV IKLF+ EQ AM +G RR Sbjct: 1070 EQQNLHTWSFGELPKVYQQKRGGYDVKAFPALVDTKDSVEIKLFETEQEQITAMKSGQRR 1129 Query: 1073 LLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEE 1132 L+LLN+PSPIKYLH LPNK+KLGLYFNPYG+VL+LIDDCI+CG+DKLI+ GG VW E Sbjct: 1130 LILLNVPSPIKYLHSNLPNKSKLGLYFNPYGQVLDLIDDCIACGIDKLIEQKGGIVWEPE 1189 Query: 1133 GFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGL 1192 F AL E VRAEL+DTVV+IA+QVE ILT F I+K+LKGRVD++MA LSDIKAQ+ GL Sbjct: 1190 QFEALKEHVRAELDDTVVEIAQQVETILTTAFAISKKLKGRVDLSMAFALSDIKAQIEGL 1249 Query: 1193 VYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLP 1252 +++GF T G+KRL D LRY++AIE+R+EKL +DP++DR M+KV++V +++ +NK+P Sbjct: 1250 IFKGFATECGWKRLPDILRYMKAIERRMEKLPIDPNKDRLHMIKVDSVMNDYKELLNKIP 1309 Query: 1253 PARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 E+VKE+RWMIEELRVS+FAQQLGTPYP+SDKR+ A++ Sbjct: 1310 KGIAVPENVKEVRWMIEELRVSFFAQQLGTPYPVSDKRVKNAIDA 1354 >UniRef50_Q65SL6 HrpA protein n=9 Tax=Pasteurellaceae RepID=Q65SL6_MANSM Length = 1337 Score = 1744 bits (4517), Expect = 0.0, Method: Composition-based stats. Identities = 884/1336 (66%), Positives = 1067/1336 (79%), Gaps = 43/1336 (3%) Query: 3 EQQKLTFTALQQ----RLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAA 58 + K F ALQ+ +++ +M+ ++ R R+ G+ ++K +QQA ++ ++I QA Sbjct: 5 KTPKREFNALQKSLAEQIEDVMIVEQSRLLARIRGLGQIKKEQSQQAAALDIEQQIQQAK 64 Query: 59 GKVLLREAARP-EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 ++ LR++A I +P+NLPVSQ+K +I + I +QVVIVAGETGSGKTTQLPK+C+EL Sbjct: 65 LRLELRKSAVKNPIVFPENLPVSQRKTEIQKLIAQNQVVIVAGETGSGKTTQLPKMCLEL 124 Query: 118 GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 G G KGLIGHTQPRR+AAR+VA RIAEE++TE GG +GYKVRF+D + ++T +KLMTDGI Sbjct: 125 GFGQKGLIGHTQPRRIAARSVAARIAEEMQTELGGIVGYKVRFNDQIGEDTQIKLMTDGI 184 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAEIQ DR L +YD +IIDEAHERSLN DF+LGYLK+LLPRRPDLK+IITSATID ERF Sbjct: 185 LLAEIQTDRFLNRYDCLIIDEAHERSLNNDFILGYLKQLLPRRPDLKVIITSATIDVERF 244 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFM 297 S+HFNNAPIIEVSGRTYPVEVRYRP+ E E+DQLQ I +AVDEL E GDILIF+ Sbjct: 245 SKHFNNAPIIEVSGRTYPVEVRYRPVAETE---EQDQLQGILNAVDELQAEGRGDILIFL 301 Query: 298 SGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTV 357 SGEREIRDTA+AL K NLRHTEILPLYARLS EQN++F RIVLATNVAETSLTV Sbjct: 302 SGEREIRDTAEALEKQNLRHTEILPLYARLSAQEQNKIFHPGGLNRIVLATNVAETSLTV 361 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG+CIRLYSE DF Sbjct: 362 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGVCIRLYSEQDF 421 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 +RPEFTDPEILRTNLASVILQMTALGL DI AFPFV+APDKR+IQDG++LLEELGA Sbjct: 422 NNRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDKRHIQDGIKLLEELGAFEW 481 Query: 478 DE-----------------------------------QASAYKLTPLGRQLSQLPVDPRL 502 + + LT GRQL+QLPVDPRL Sbjct: 482 QKSPPSAFGTSPRKRGEGNLASNSSLPPFTGGAGHSPEGGKRVLTQTGRQLAQLPVDPRL 541 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562 A+M+L A GCV E MII +ALSIQDPRERP +KQQ++D+KHRRF DK+SDFLAF+NLW Sbjct: 542 AKMLLSAVDLGCVLEVMIIVAALSIQDPRERPQEKQQSADDKHRRFADKKSDFLAFLNLW 601 Query: 563 NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREI 622 NY+ EQQK LS N FRRLC+ DYLNYLRVREWQDIY Q+R V+E+G+P+NSEPA+Y +I Sbjct: 602 NYIQEQQKVLSKNQFRRLCQKDYLNYLRVREWQDIYHQIRLTVREMGLPINSEPAQYPQI 661 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 H ALL+GLLSHIGMK+A+KQ+Y GARNA F+IFP S LFKK PKWVM AELVETS+LWGR Sbjct: 662 HSALLSGLLSHIGMKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGR 721 Query: 683 IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDP 742 + A IDPEWVEP+A+HLIK +YSEP W +++G V+A EKV++YG+PIVA+R VNY IDP Sbjct: 722 MVAEIDPEWVEPLAKHLIKSSYSEPRWSKSRGQVIANEKVSLYGVPIVASRPVNYGAIDP 781 Query: 743 ALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQR 802 RE+FI+ ALVEGDW TRH FF EN KL EVE+LEHKSRRRDILVDD TLFEFYD R Sbjct: 782 QTSREIFIQSALVEGDWHTRHKFFFENQKLIREVEDLEHKSRRRDILVDDRTLFEFYDSR 841 Query: 803 ISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLS 862 I DV+S +HFDSWWKK +++ P+LLNFEKS L+KE A+K+S+LD+PNFWHQGNLKL+L+ Sbjct: 842 IGADVVSQKHFDSWWKKAAQQDPELLNFEKSFLMKEDAQKVSQLDFPNFWHQGNLKLKLT 901 Query: 863 YQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAP 922 YQFEPG DADGVTVHIPLPLLNQ+E GF+WQIPGLR EL+++LIK+LPK +RRNFVPAP Sbjct: 902 YQFEPGTDADGVTVHIPLPLLNQIEMQGFDWQIPGLRHELIVSLIKALPKSLRRNFVPAP 961 Query: 923 NYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKK 982 NYAEAFL RV + PL ++L ELRRMTGV V+ E+W +Q+P HL++TFRV+D+K KK Sbjct: 962 NYAEAFLARVANFDKPLTETLSYELRRMTGVNVEVEEWKLEQIPPHLRMTFRVIDEKGKK 1021 Query: 983 LKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWP 1042 + E +L +LK LK +VQ+++SAVADDGIEQSG+HIW+F LP+ YEQK+ + VKA+P Sbjct: 1022 IAESMNLDELKFGLKDQVQQSISAVADDGIEQSGIHIWNFDSLPQCYEQKKQGFTVKAFP 1081 Query: 1043 ALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPY 1102 A+ DE+++V IKLF+ EQ AM GLRRL+LLN+PSPIKYLHEKLPNK+KLGLYF P+ Sbjct: 1082 AITDEKEAVGIKLFETEYEQSVAMQQGLRRLILLNVPSPIKYLHEKLPNKSKLGLYFTPF 1141 Query: 1103 GKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTA 1162 GKVL+LIDDCI+C VDKLI GG VW E F L + VR LN+ VDIA+QVE++LT Sbjct: 1142 GKVLDLIDDCIACAVDKLIADFGGFVWNERDFERLRDFVRENLNEITVDIAQQVERLLTL 1201 Query: 1163 VFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEK 1222 F INKRLKG++D TMA LSDIK+Q+ GL+Y GFV G+ RL D RYLQAI+KR++K Sbjct: 1202 TFEINKRLKGKMDFTMAFALSDIKSQLAGLIYPGFVEKTGYARLPDIQRYLQAIDKRMDK 1261 Query: 1223 LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGT 1282 LA D +RDRA ML+VE QQA+QQ + KLP ++ +V EIR+MIEELRVS FAQQLGT Sbjct: 1262 LAQDINRDRAAMLRVEQCQQAYQQLLAKLPKSKPLSTEVLEIRYMIEELRVSLFAQQLGT 1321 Query: 1283 PYPISDKRILQAMEQI 1298 YP+S+KR+L + +I Sbjct: 1322 KYPVSEKRVLGVITEI 1337 >UniRef50_P45018 ATP-dependent RNA helicase hrpA homolog n=53 Tax=Bacteria RepID=HRPA_HAEIN Length = 1304 Score = 1729 bits (4478), Expect = 0.0, Method: Composition-based stats. Identities = 906/1303 (69%), Positives = 1075/1303 (82%), Gaps = 11/1303 (0%) Query: 3 EQQKLTFTALQQ----RLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAA 58 K T T LQQ +L+ +ML D+ R S R+HG+ K+K+ +AQQA+ E+ ++I+QA Sbjct: 4 SSVKHTLTPLQQSLFSQLNDIMLVDQRRLSARIHGIGKIKSQEAQQAVAAEIQQQIEQAR 63 Query: 59 GKVLLREAARP-EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 +V R++A I +P++LPVSQ+K +I + I +HQV++VAGETGSGKTTQLPK+C+EL Sbjct: 64 LRVEQRKSAVQNPIVFPESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLEL 123 Query: 118 GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 G G G+IGHTQPRR+AAR+VA RIAEEL+TE GG +GYKVRF+D +SDNT +KLMTDGI Sbjct: 124 GFGNLGMIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGI 183 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL-PRRPDLKIIITSATIDPER 236 LLAEIQ DR L QY +IIDEAHERSLN DF+LGYLK+LL RR DLK+IITSATID ER Sbjct: 184 LLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVER 243 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIF 296 FS+HFNNAPIIEVSGRTYPVEVRYRP+VEE D +DQLQ I +AVDEL E GDILIF Sbjct: 244 FSKHFNNAPIIEVSGRTYPVEVRYRPVVEEDD---QDQLQGILNAVDELQAEGRGDILIF 300 Query: 297 MSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 M+GEREIRDTA+AL K NL+HTEILPL+ARLS EQN++F RIVLATNVAETSLT Sbjct: 301 MNGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLT 360 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VP IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE+D Sbjct: 361 VPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEED 420 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F SRPEFTDPEILRTNLASVILQMTALGL DI AFPFV+APD+R+IQDGV+LLEELGA Sbjct: 421 FNSRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFE 480 Query: 477 TDEQASAYK--LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 T + S K LT +GRQL+QLPVDPRLA+M+L A GCV E MII SALSIQDPRERP Sbjct: 481 TVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERP 540 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 +KQQASDEKHRRF DK+SDFLAF+NLW YL EQQK S N FRR C+ D+LNYLR+REW Sbjct: 541 QEKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREW 600 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 QDIY Q+R V+E+ +P+NSE AEY++IH ALL+GLLSHIG+K+A+KQ+Y GARNA F+I Sbjct: 601 QDIYHQIRLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAI 660 Query: 655 FPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 FP S LFKK PKWVM AELVETS+LWGR+ A I+PEW+EP+A+HLIK++YS P W +++G Sbjct: 661 FPNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKSYSVPLWSKSRG 720 Query: 715 AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA 774 AV+A EKVT+YG+PIVA R VNY IDP + RE+FI+ ALVEG W T+H FF+EN +L Sbjct: 721 AVIADEKVTLYGVPIVAVRPVNYGAIDPTVSREIFIQSALVEGGWNTKHKFFKENQRLVR 780 Query: 775 EVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSM 834 EVEELEHKSRRRDILVDD TLFEFYDQRI +V+S +HFD+WWKK ++ P+LLNFE S Sbjct: 781 EVEELEHKSRRRDILVDDRTLFEFYDQRIGTEVVSQKHFDTWWKKAQQKDPELLNFEHSF 840 Query: 835 LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQ 894 LI + AE++SKLD+PNFWHQGNLKL+L+YQFEPG DADGVTVHIPLPLLNQVE +GF+WQ Sbjct: 841 LINDDAEQVSKLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQ 900 Query: 895 IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVT 954 IPGLR ELVIALIKSLPK RRNFVPAPNYA+AFL R PLE PLLD+L ELRRMTGVT Sbjct: 901 IPGLREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLIYELRRMTGVT 960 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 V+ E W+W+Q+P HLK+TFRVVD+ KK+ E +L +LK LK +VQE++SAVADDGIEQ Sbjct: 961 VEAEHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKFNLKDRVQESISAVADDGIEQ 1020 Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 SGLHIWSF LP+ YEQK+ + VKA+PA+VDE+D+V IKLF+ EQ AM GLRRLL Sbjct: 1021 SGLHIWSFADLPQCYEQKQRGFSVKAFPAIVDEKDAVGIKLFETEFEQSVAMQQGLRRLL 1080 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 LLN+PSPIKYLHEKLPNKAKLGLYF P+G+VL+LIDDCI+C VDKLI GG VW E GF Sbjct: 1081 LLNVPSPIKYLHEKLPNKAKLGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAGF 1140 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 L + VR LN+ VDIA++VEQILT + +N+RLKG++D TMA LSDIK+Q+ GLVY Sbjct: 1141 EKLRDFVRENLNEVTVDIAQKVEQILTLTYQLNQRLKGKMDFTMAFALSDIKSQLAGLVY 1200 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPA 1254 +GFV +G+ RL D RYLQA++KR++KLA D +RDRA ML+VE VQQA+QQ + KLP + Sbjct: 1201 QGFVQKSGYDRLPDLQRYLQAVDKRIDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPKS 1260 Query: 1255 RREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 + ++V EIR+MIEELRVS FAQQLGT Y ISDKRI + Q Sbjct: 1261 KPISDEVAEIRYMIEELRVSLFAQQLGTKYQISDKRIGNIISQ 1303 >UniRef50_Q47MH0 ATP-dependent helicase HrpA n=13 Tax=Bacteria RepID=Q47MH0_THEFY Length = 1324 Score = 1693 bits (4385), Expect = 0.0, Method: Composition-based stats. Identities = 808/1316 (61%), Positives = 1008/1316 (76%), Gaps = 19/1316 (1%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 T K F L++RL LM RDR R RR+ G +K+++PD ++A+ E++ +ID +V Sbjct: 3 TPSVKSPFADLRRRLPGLMPRDRHRLRRRIDGAEKIRDPDRRRAVAAEISADIDTCEARV 62 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R +A P I YP LPVSQKK +IL AIRDHQVVIVAGETGSGKTTQLPKIC+ELGRG+ Sbjct: 63 ERRRSAFPAIDYPAELPVSQKKDEILAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGV 122 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G IGHTQPRRLAARTVA RIAEEL T G +GYKVRF+D SD+T+VKLMTDGILLAE Sbjct: 123 LGQIGHTQPRRLAARTVAARIAEELGTTLGEWVGYKVRFTDVSSDDTLVKLMTDGILLAE 182 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQQDR+L YDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+IITSATIDPERFSRHF Sbjct: 183 IQQDRMLRAYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVIITSATIDPERFSRHF 242 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEE---------ADDTERDQLQAIFDAVDELSQESHGD 292 +NAPI+EVSGRTYPVEVRYRP+ E A +RDQ+Q I DAVDEL E GD Sbjct: 243 DNAPIVEVSGRTYPVEVRYRPLTAEQVVDDEDTVAATDDRDQIQGICDAVDELCAEGPGD 302 Query: 293 ILIFMSGEREIRDTADALNKLNLRH--------TEILPLYARLSNSEQNRVFQSHSGRRI 344 IL+F+SGEREIRDTA+AL K R EILPLYARLS +EQ RVFQ RRI Sbjct: 303 ILVFLSGEREIRDTAEALGKHLARRYPEGSPQAVEILPLYARLSAAEQQRVFQPRGKRRI 362 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VLATNVAETSLTVPGI+YV+DPGTARISRYS+RTKVQRLPIE ISQASANQRKGRCGRV+ Sbjct: 363 VLATNVAETSLTVPGIRYVVDPGTARISRYSHRTKVQRLPIERISQASANQRKGRCGRVA 422 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 EGICIRLYSE+DFLSRPEFT+PEILRTNLASVILQM ALGLGD+ FPFV+ PD+R ++D Sbjct: 423 EGICIRLYSEEDFLSRPEFTEPEILRTNLASVILQMAALGLGDVEEFPFVDGPDRRQVKD 482 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 GV LL ELGA+ + ++LT LGR L+QLP+DPRL RMV+EA ++GC+ E M+I +A Sbjct: 483 GVALLTELGALQP-AKDGRHRLTALGRTLAQLPIDPRLGRMVVEADRNGCLHEVMVIAAA 541 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LSIQDPRERP+++QQA+ +KH RF +SDFLA++NLWNYL E+Q+ LS N FR++CR + Sbjct: 542 LSIQDPRERPVEQQQAAAQKHARFAVPDSDFLAYLNLWNYLNERQQELSGNQFRKMCREE 601 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 +LNYLRVREWQDIY QLRQ+V+ LG+ VN+ PA+ + IH++LL GLLSHIG+KD +K EY Sbjct: 602 FLNYLRVREWQDIYAQLRQIVQSLGMKVNTAPADAKRIHLSLLAGLLSHIGLKDPEKHEY 661 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 GAR ARF+IFPGS LFKK P+WVM AELVETSRLW R+ ARI+PEWVE +A HL+KRTY Sbjct: 662 LGARGARFAIFPGSALFKKQPRWVMSAELVETSRLWARVNARIEPEWVEELAGHLVKRTY 721 Query: 705 SEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHA 764 SEPHWE+ +GAVMA E+VT+YG+PIV RKV+Y +IDP RELFIRHALV+G+W TRHA Sbjct: 722 SEPHWEKKRGAVMAYERVTLYGVPIVTQRKVDYGRIDPKTARELFIRHALVQGEWDTRHA 781 Query: 765 FFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRET 824 FFR N KL EVEELEH+ RRRDILVDD+ LF+FYDQR+ +V+S RHFDSWWK+V ++ Sbjct: 782 FFRRNQKLLQEVEELEHRVRRRDILVDDDVLFDFYDQRVGAEVVSVRHFDSWWKRVRQQQ 841 Query: 825 PDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLN 884 P LL+F+KSML+ E A + + YP+FW QG + RL+YQFEPG ADGVTVHIPL +LN Sbjct: 842 PRLLDFDKSMLVAEDAGEGIEEAYPDFWQQGEHRFRLTYQFEPGDAADGVTVHIPLNVLN 901 Query: 885 QVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLE 944 QV GF+WQIPGLR ELV+AL++SLPK +RR+FVP PNYA L R+KP PLL++L Sbjct: 902 QVSPEGFDWQIPGLREELVVALMRSLPKAIRRSFVPVPNYAADVLKRLKPYSEPLLEALS 961 Query: 945 RELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETL 1004 REL M G V +DW D+VPD+L++TFR VDDK + L E + L++L+ L+ ++++ + Sbjct: 962 RELTAMGGPRVTVDDWQLDRVPDYLRMTFRAVDDKGRTLAEAKDLEELRRRLQPRLRKAI 1021 Query: 1005 SAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQ 1064 SA A IE++GL W FG LP ++E++ + V+ +PALVDE +V +++FDN Q+Q Sbjct: 1022 SAEA-ASIERTGLTSWDFGPLPRTFERRTAGHIVRGYPALVDEGTTVGVRIFDNAAAQQQ 1080 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 AM G RRLL+L +PSP K+L L N+ L +P+G V L DDCI C VD L+ Sbjct: 1081 AMVAGTRRLLMLTVPSPAKFLRGHLSNQTTLVFSRSPHGSVAALFDDCIGCAVDSLVAEA 1140 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 GGPVW E FA L E VR L + V+++ VE+IL + K+LK + + ++D Sbjct: 1141 GGPVWDPESFAKLREHVRVNLVERVMELLPVVEKILATAQRVEKQLKSVTSLAVLPSITD 1200 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 I+ Q+G L+ GFVT G++RL D RYL+AIE RLE+L +P RD+ M K+E ++QA+ Sbjct: 1201 IQNQLGALIGPGFVTAAGYQRLRDLTRYLKAIEVRLERLPRNPRRDQVNMAKIEQLRQAY 1260 Query: 1245 QQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 QQ +++LPP + IRWM+EELR+SYFAQ++GT Y +S+KR+L+A+ ++ Sbjct: 1261 QQLLDRLPPGVPPGPAHENIRWMLEELRISYFAQEVGTAYSVSEKRVLKAISEVEA 1316 >UniRef50_Q3JBJ6 ATP-dependent helicase HrpA n=3 Tax=Chromatiaceae RepID=Q3JBJ6_NITOC Length = 1281 Score = 1653 bits (4282), Expect = 0.0, Method: Composition-based stats. Identities = 652/1291 (50%), Positives = 874/1291 (67%), Gaps = 22/1291 (1%) Query: 20 MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV 79 M RD+ R RRL + K + + + I+ + R++ P + +LPV Sbjct: 1 MQRDQHRLKRRLQRLTKGNS----SYNLGHLTQAIEDSRLWREQRQSQLPRPAFEQSLPV 56 Query: 80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA 139 +++++I AIR+HQVVI+ GETGSGKTTQLPKIC+ELGRG+ G+IGHTQPRR+AARTVA Sbjct: 57 IERREEIGAAIRNHQVVILCGETGSGKTTQLPKICLELGRGVAGMIGHTQPRRIAARTVA 116 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 NRIA+EL ++ G +GYKVRF D VS +T +KLMTDGILLAE Q DR L QYDT+IIDEA Sbjct: 117 NRIAKELNSDLGQIVGYKVRFHDQVSPSTYIKLMTDGILLAETQGDRFLDQYDTLIIDEA 176 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR 259 HERSLNIDFLLGYLK+LLP+RPDLK+IITSATID ERFS+HF APIIEVSGRTYPVE+R Sbjct: 177 HERSLNIDFLLGYLKQLLPKRPDLKVIITSATIDTERFSQHFGQAPIIEVSGRTYPVEIR 236 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTE 319 YRP+ E + ER+ + I DAVDELS+ GDIL+F+ GEREIR+TA+AL K + HTE Sbjct: 237 YRPLCGEQETQERNLSEGILDAVDELSRLGPGDILVFLPGEREIRETAEALRKHHPPHTE 296 Query: 320 ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK 379 ILPLYARLS++EQNRVF+ HSGRRIVLATNVAETSLTVPGI YV+DPG AR+SRYS R+K Sbjct: 297 ILPLYARLSSTEQNRVFKPHSGRRIVLATNVAETSLTVPGIHYVVDPGLARLSRYSVRSK 356 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ 439 VQRLPIE ISQ+SANQR GRCGRV+ G+CIRLYSE+DFL RPEFTDPE+LRTNLASVILQ Sbjct: 357 VQRLPIEKISQSSANQRAGRCGRVATGVCIRLYSEEDFLGRPEFTDPEVLRTNLASVILQ 416 Query: 440 MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD 499 M +L LG + FPF++ P + I DG+RLL ELGA+ A LTPLG++L++LP+D Sbjct: 417 MKSLQLGAVEDFPFLDPPLPKMINDGLRLLAELGAVD-----KAQNLTPLGQRLARLPID 471 Query: 500 PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV 559 PR+ RMVL + C+ E +II SALSIQDPRERP++ QQA+DE H RF D+ SDFL+++ Sbjct: 472 PRIGRMVLAGDEFHCLSEMLIIASALSIQDPRERPLEAQQAADEAHSRFQDERSDFLSYL 531 Query: 560 NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY 619 LW L Q+ LS N R CR +L+YLR+REW+DI+ QL+ + +G N AEY Sbjct: 532 KLWEDLHRQRARLSQNKLRAYCREHFLSYLRLREWRDIHQQLKLLATNIGFRPNQVAAEY 591 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL 679 IH ALLTGLL +I +K +K Y GARN + IFPGS LFKK PKW+M AELVETSRL Sbjct: 592 GAIHRALLTGLLGNIAVKS-EKDHYLGARNIKLQIFPGSALFKKSPKWIMAAELVETSRL 650 Query: 680 WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ 739 + R A +I+PEW+E +A HL+KR+Y +PHWE+ V+A E++T+YGL ++ R+++Y Sbjct: 651 YARCAGKIEPEWLEALALHLVKRSYFDPHWEKRPAQVIAYERITLYGLTVIPKRRIHYGP 710 Query: 740 IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY 799 ++P RE+FIR ALV GD+ T+ FFR N KL AE+EELEHKSRRRD+L+D+++L++FY Sbjct: 711 VNPEEAREIFIREALVNGDYDTQAPFFRHNQKLIAEIEELEHKSRRRDVLIDEQSLYQFY 770 Query: 800 DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL 859 ++R+ V + F W ++ ++ P LL + L++ A++I+ + +P+ L L Sbjct: 771 EERLPAGVYNGAGFKKWRQQAEKKNPQLLFLSREELMRHDAKEITGVRFPDQMTVKGLPL 830 Query: 860 RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV 919 LSY FEPG ADGVT+ +PL +LNQ+E S F+W +PGL +E +I LIK+LPK +RRNFV Sbjct: 831 ALSYHFEPGHPADGVTLTVPLAVLNQLEASHFQWLVPGLLKEKIICLIKALPKGLRRNFV 890 Query: 920 PAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK 979 P P++AEA + + P + PLLD L R L+ MTGV + W +P HL++ FR+VD+K Sbjct: 891 PVPDFAEACIRALSPAQGPLLDRLARHLQSMTGVPLSATCWQEVDLPLHLQMNFRLVDEK 950 Query: 980 NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK 1039 +K+L GR L L+ K Q + + + + G+ W FG+LPE E +R K+K Sbjct: 951 DKELATGRDLAILQRQWASKAQRSFRGWDNSELTREGITQWDFGELPERIELERQGLKLK 1010 Query: 1040 AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF 1099 +PAL D +V++ + D+ ++ GLRRL +L + IKYL + LP K+ L++ Sbjct: 1011 GYPALQDTETAVSLVIMDSAEAAQEITHLGLRRLFMLALTQQIKYLRKNLPGIQKMCLHY 1070 Query: 1100 NPYG------------KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELND 1147 L D I +D+ + PV E F A EK EL Sbjct: 1071 TSLPAMPWGDSAPSQSSCESLKDALIQGIIDRTFILDHPPVRNGEKFMARKEKGCGELMS 1130 Query: 1148 TVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLG 1207 T + + +E+ILT + ++LKG + + D+K Q+ LVY GF+ L Sbjct: 1131 TANEFCRLIEEILTEYHEVVRQLKGNLPFAWLNSIRDMKEQLTHLVYHGFINQTSPIWLI 1190 Query: 1208 DTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWM 1267 RYL+ I+ RL KL +P RD+ + ++ + QA+Q+ + ++ RWM Sbjct: 1191 HLPRYLKGIKLRLAKLQENPRRDQQRQAEITPLWQAYQKRMEIQHQEDGVVPALETYRWM 1250 Query: 1268 IEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +EE R+S FAQ+LGT P+S KR+ ++I Sbjct: 1251 LEEYRISLFAQELGTKRPVSPKRLAAQWKEI 1281 >UniRef50_A4X5M6 ATP-dependent helicase HrpA n=6 Tax=Actinomycetales RepID=A4X5M6_SALTO Length = 1339 Score = 1636 bits (4237), Expect = 0.0, Method: Composition-based stats. Identities = 782/1322 (59%), Positives = 999/1322 (75%), Gaps = 36/1322 (2%) Query: 10 TALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARP 69 L +RL LMLRD+ R RRL G +++ +P ++ E+ ++ +A ++ +R+AA P Sbjct: 14 RELHRRLRPLMLRDQHRLRRRLDGARRIPDPQRRETALAEITTDVVRAEARLAVRQAAVP 73 Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ITYP LPVS ++ +I AIRDHQVVIVAGETGSGKTTQLPKIC+ELGRG+ GLIGHTQ Sbjct: 74 AITYPAMLPVSDRRDEIAAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVHGLIGHTQ 133 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAARTVA+RIAEEL TE G +GY+VRF+D VSD ++VKLMTDGILLAE+Q DR+L Sbjct: 134 PRRLAARTVADRIAEELGTELGEVVGYQVRFADQVSDRSLVKLMTDGILLAELQHDRMLR 193 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-----NNA 244 QYDTII+DEAHERSLNIDF+LGYL++LLPRR DLK+IITSATI+ +RF+RHF N A Sbjct: 194 QYDTIIVDEAHERSLNIDFILGYLRQLLPRRRDLKVIITSATIETDRFARHFADADGNPA 253 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDT-------ERDQLQAIFDAVDELSQESHGDILIFM 297 P++EVSGRTYPVEVRYRP+VE +D RDQ+QAI DAV EL+ E GDIL+F+ Sbjct: 254 PVVEVSGRTYPVEVRYRPLVEVGEDEDDTDEEQVRDQVQAIGDAVQELATEGPGDILVFL 313 Query: 298 SGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAE 352 SGEREIRDTADAL KL LR+TEILPLYARLS +EQ+RVF H+GRR+VLATNVAE Sbjct: 314 SGEREIRDTADALGKLVAHRPTLRNTEILPLYARLSTAEQHRVFAPHTGRRVVLATNVAE 373 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TSLTVPGI+YV+DPGTARISRYS R KVQRLPIEP+SQASANQR GRCGR S+GICIRLY Sbjct: 374 TSLTVPGIRYVVDPGTARISRYSNRLKVQRLPIEPVSQASANQRTGRCGRTSDGICIRLY 433 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 E DF SRPEFTDPEILRTNLASVILQMTA+GLGDIAAFPF++ PD+R I DGV LL EL Sbjct: 434 DEPDFQSRPEFTDPEILRTNLASVILQMTAIGLGDIAAFPFIDPPDRRTITDGVNLLHEL 493 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 GA+ E A +LTPLGR+L+QLPVDPRLARMVLE +++GC E ++I +ALSIQDPRE Sbjct: 494 GALNPTETDPAKRLTPLGRRLAQLPVDPRLARMVLEGERNGCATEVVVIAAALSIQDPRE 553 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP+DKQ +D+ H RF D+ESDF+A++NLW +L EQQ+A SS+ FRR+CR++YLNYLRVR Sbjct: 554 RPVDKQAQADQAHARFADQESDFVAYLNLWRHLREQQRARSSSGFRRMCRSEYLNYLRVR 613 Query: 593 EWQDIYTQLRQVVKELGIPVN------------------SEPAEYREIHIALLTGLLSHI 634 EWQDI +QLRQ ++ E + ++H +LL GLLSH+ Sbjct: 614 EWQDIVSQLRQALRTPERSRRRGGPATDGGERRGGGADLPEEIDTPKVHQSLLAGLLSHV 673 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 G+KD + EY GAR A+F++FPGS L KKPP+WVM AELVET+RLWGR+ R++PEWVEP Sbjct: 674 GLKDTQRHEYLGARGAKFALFPGSALAKKPPRWVMAAELVETTRLWGRVNGRVEPEWVEP 733 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 +AQHL+KR+YSEPHWE+ Q AVMA EKVT+YG+PIV++RKVN+ +IDP + RELFIRHAL Sbjct: 734 LAQHLVKRSYSEPHWEKRQAAVMAVEKVTLYGVPIVSSRKVNFGRIDPVVSRELFIRHAL 793 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 VEGDWQT H F+R+N +L EV ELE++ RRRDILVDDET+F+FYD+R+ +V+S RHFD Sbjct: 794 VEGDWQTHHQFWRDNQQLLDEVTELENRVRRRDILVDDETIFQFYDERVPAEVVSGRHFD 853 Query: 815 SWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV 874 +WWK+ R+ PDLL F + +L+ G + ++ YP+ W ++L L+Y+F+PG ADGV Sbjct: 854 AWWKRERRQRPDLLTFTRDLLVNAGRGGVDEVGYPDEWRADGVRLPLTYRFDPGTPADGV 913 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP 934 TV IPLPLLNQV F+WQ+PGLR ELVIALI+SLPK VRRNFVP P+YA A L + P Sbjct: 914 TVDIPLPLLNQVPAESFQWQVPGLREELVIALIRSLPKAVRRNFVPVPDYARAVLAELPP 973 Query: 935 LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKD 994 E LLD+L R+LRRMTGVTV R+ W ++P HL++TFRV+ + ++ + E + L L+ Sbjct: 974 GEEDLLDALTRQLRRMTGVTVPRDAWDLGKLPPHLRVTFRVLGEDDRPVAESKDLPALQR 1033 Query: 995 ALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIK 1054 L +V++ ++A A D + +SGL W G LP + EQ R Y V A+PALVDE +V ++ Sbjct: 1034 ELTAEVRQVVAAAAPD-VTRSGLTDWEIGALPRTVEQVRAGYAVTAYPALVDEGATVGVR 1092 Query: 1055 LFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIS 1114 +FD+P EQ+ A W G RRLL L PSP K+L +L N+AKL L NP+G V LI+D Sbjct: 1093 VFDSPAEQEAAHWAGTRRLLRLTAPSPAKFLQGRLSNEAKLALSRNPHGGVPALIEDAAG 1152 Query: 1115 CGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRV 1174 +DKLI GGP W +G+AAL VR L +TVV++ ++V +L A + I +RL Sbjct: 1153 AALDKLIADAGGPAWDADGYAALRSTVRTGLVETVVEVMERVRGVLAAGYAIEQRLGATR 1212 Query: 1175 DMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQM 1234 ++ + L+D+++Q+ GL++ GF+T G+ RL D RYL AIE+RL++L +P RD+ Q Sbjct: 1213 NLAVVAALADVRSQLTGLIHPGFITEAGYPRLPDLRRYLTAIERRLDRLPGNPARDKQQQ 1272 Query: 1235 LKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQA 1294 ++ VQ+ + + LPPA+R V++IRWMIEELRV+ FAQ LGTPYP+S++RI +A Sbjct: 1273 DRIAVVQREYADLLAALPPAKRRTVAVRQIRWMIEELRVNVFAQALGTPYPVSEQRIYRA 1332 Query: 1295 ME 1296 M+ Sbjct: 1333 MD 1334 >UniRef50_B5GG28 ATP-dependent helicase n=3 Tax=Streptomyces RepID=B5GG28_9ACTO Length = 1333 Score = 1615 bits (4182), Expect = 0.0, Method: Composition-based stats. Identities = 784/1327 (59%), Positives = 990/1327 (74%), Gaps = 31/1327 (2%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 + T L RL L RD R RRL G ++V+ P+A+ A+ E+ EI +A ++ Sbjct: 4 SPAPAPTSADLAPRLALLAPRDAQRLGRRLEGTRRVRKPEARSAVLAEIEAEITKAEERL 63 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R A PE+ YP LPVS KK DI +AIR HQVVIVAGETGSGKTTQ+PKIC+ELGRG+ Sbjct: 64 AERAAHVPEVAYPPQLPVSAKKDDIADAIRAHQVVIVAGETGSGKTTQIPKICLELGRGV 123 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 +G+IGHTQPRRLAARTVA R+A EL T G +G+KVRF+D VS T VKLMTDGILLAE Sbjct: 124 RGMIGHTQPRRLAARTVAERVASELDTPLGEAVGWKVRFTDQVSRGTYVKLMTDGILLAE 183 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQ DR L YDTIIIDEAHERSLNIDFLLGYL +LLPRRPDLK+IITSATIDPERFSRHF Sbjct: 184 IQTDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPRRPDLKVIITSATIDPERFSRHF 243 Query: 242 NNAPIIEVSGRTYPVEVRYRPIV-EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 +API+EVSGRTYPVEVRYRP++ E++++ +RDQ+ AI DAV+EL +E GDIL+F+SGE Sbjct: 244 GDAPIVEVSGRTYPVEVRYRPLLAEDSEEPDRDQVTAIIDAVEELRREPSGDILVFLSGE 303 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG---RRIVLATNVAETSLTV 357 REIRDTADAL K TE+LPLYARLS++EQNRVF+ SG RRIVLATNVAETSLTV Sbjct: 304 REIRDTADALEKRKFPFTEVLPLYARLSHAEQNRVFKRASGDSARRIVLATNVAETSLTV 363 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGIKYVIDPGTARISRYS RTKVQRLPIE ISQASANQRKGRCGR S+GIC+RLYSE+DF Sbjct: 364 PGIKYVIDPGTARISRYSSRTKVQRLPIEAISQASANQRKGRCGRTSDGICVRLYSEEDF 423 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 +RPEFTD EILRTNLASVILQMT+ GLG+I FPF++ PD RNI+DGV+LL+ELGA+ Sbjct: 424 EARPEFTDAEILRTNLASVILQMTSAGLGEIEKFPFIDPPDHRNIRDGVQLLQELGALDP 483 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 +++ +LT GR+L+QLPVDPRLARMVLEA ++GCVRE M++ +ALS+QDPRERP +K Sbjct: 484 EQKDPRKRLTQTGRRLAQLPVDPRLARMVLEADRNGCVREVMVVAAALSLQDPRERPSEK 543 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 Q +D+ H RF D+ SDFLAF+NLW Y+ EQQKALSS+AFRR+CR ++LNYLR+REWQDI Sbjct: 544 QAQADQFHARFKDETSDFLAFLNLWTYIREQQKALSSSAFRRMCRNEFLNYLRIREWQDI 603 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD-----------------AD 640 Y Q+R V ++LG+ VN++ + ++H++LL GLLSHIGMKD Sbjct: 604 YAQVRSVAQQLGLHVNTDDSPPEQVHVSLLAGLLSHIGMKDVKESTAKDPAQQAKEKRRG 663 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 EY GAR A+F++FPGS LFKKPP++VM AELVETSRLW R+ ARI+PEW E + HL+ Sbjct: 664 GNEYLGARGAKFAVFPGSALFKKPPRYVMSAELVETSRLWARVNARIEPEWAERLGAHLV 723 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 KRTYSEPHWE+ Q AVMA EKVT+YG+ + A RKVNY +IDP + RELFIR+ALVEGDW+ Sbjct: 724 KRTYSEPHWEKDQAAVMAYEKVTLYGVTLAAQRKVNYGRIDPEVSRELFIRNALVEGDWR 783 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 T H FF +N +L EVEELEH++RRR I+VDDE LF+FYD+R+ V+S HFDSWWK+ Sbjct: 784 THHKFFADNRRLLTEVEELEHRARRRGIVVDDEALFDFYDERVPTHVVSGAHFDSWWKRK 843 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 +E P+LL+FE+SML+ E A+ I+K DYP+ W QG L LR++YQFEPGADADGVTVH+PL Sbjct: 844 RQEEPELLDFERSMLLTEAAQGITKDDYPDRWRQGPLDLRVTYQFEPGADADGVTVHVPL 903 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 +LNQV GF+WQIPGLR E+V LI+SLPKPVRRN+VPAPN+A FL PL PL Sbjct: 904 QVLNQVTSEGFDWQIPGLREEVVTELIRSLPKPVRRNYVPAPNFARRFLATASPLSAPLT 963 Query: 941 DSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKV 1000 +L + L++M GV V ED+ +VPDHLKITFR+VD++ +KL E + L L+D L+ K Sbjct: 964 TALAKGLQQMVGVPVTAEDFDVAKVPDHLKITFRIVDERRRKLAEDKDLDALRDRLRPKA 1023 Query: 1001 QETLSA--------VADDGIEQSGLHIW-SFGQLPESYEQKRGNYKVKAWPALVDERDSV 1051 ++ LS +E+ GL W G L + +E +RG VKA+PALVDE D+V Sbjct: 1024 RQALSRAAAATAERAGQASVERKGLTDWGDLGTLSKVFETRRGGQPVKAYPALVDEGDTV 1083 Query: 1052 AIKLFDNPLEQKQAMWNGLRRLLLLNIP-SPIKYLHEKLPNKAKLGLYFNPYGKVLELID 1110 ++LFD+ EQ+ AMW+G RRL+L NIP +P K+ ++L N KL L NP+G + L Sbjct: 1084 GVRLFDSEEEQRVAMWHGTRRLILRNIPVNPAKFARDRLTNPQKLALSANPHGSMQALFA 1143 Query: 1111 DCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL 1170 DC + D+LI+ GGP W E G+ L+E VRA + DT V+ V+Q++ A +RL Sbjct: 1144 DCATAAADRLIERAGGPAWDEAGYRKLYEFVRAGIVDTTVNAVAAVQQVVAAWQACERRL 1203 Query: 1171 KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRD 1230 K + L+D++ Q+ LV+ GFV G RL D LRYL+A+++RL+++ + RD Sbjct: 1204 KSTRSPALLANLADVREQLDELVHPGFVAEAGLLRLSDLLRYLRAVDRRLQQMPANAQRD 1263 Query: 1231 RAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKR 1290 +M KV ++ + + + P R + ++IRWM+EELRVSYFA LGT YP+SDKR Sbjct: 1264 TTRMEKVREMRDEYLWLLEQFPQGRPVPREARDIRWMVEELRVSYFAHALGTAYPVSDKR 1323 Query: 1291 ILQAMEQ 1297 I++A++ Sbjct: 1324 IVKAIDA 1330 >UniRef50_Q482P9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=Q482P9_COLP3 Length = 1375 Score = 1583 bits (4100), Expect = 0.0, Method: Composition-based stats. Identities = 741/1371 (54%), Positives = 964/1371 (70%), Gaps = 75/1371 (5%) Query: 3 EQQKLTFTALQQR---LDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMA-------- 51 + +F+ LQ+ L D +RF +RL +KK + Q E+A Sbjct: 6 KSVITSFSHLQKLFELLPQAKKSDAVRFRKRLINLKKTITKEVGQKSPTELAMLSLSEKH 65 Query: 52 --------KEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETG 103 + I ++ + + P+ITYP+ LP+S+ I AI +QVVI+AGETG Sbjct: 66 IKLVEPLQQHILRSIQDKQQKIRSLPKITYPEGLPISENAAQISAAIDANQVVIIAGETG 125 Query: 104 SGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDH 163 SGKTTQ+PKIC+ELGRG+ GLIGHTQPRR+AARTVANRIAEEL T+ G +GYKVRF+D Sbjct: 126 SGKTTQIPKICLELGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQ 185 Query: 164 VSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDL 223 VS+ + +KLMTDGILLAE+Q+DRLL++YDTIIIDEAHERSLNIDF+LGYLK++L +RPDL Sbjct: 186 VSEQSYIKLMTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDL 245 Query: 224 KIIITSATIDPERFSRHFN-----NAPIIEVSGRTYPVEVRYRPIVEEA-------DDTE 271 K+IITSATIDP+RF++HF+ APIIEVSGRT+PVE+RYRP+ + A E Sbjct: 246 KLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQE 305 Query: 272 RDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSE 331 D + I AVDELS +GDIL+F++GEREIRDTA AL K NLRHT +LPLYARL+ SE Sbjct: 306 VDIISGILSAVDELSDCGNGDILVFLNGEREIRDTAAALVKANLRHTNVLPLYARLTVSE 365 Query: 332 QNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 QN++F+ HSGR IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP+SQA Sbjct: 366 QNQIFKPHSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQA 425 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAF 451 SANQR GRCGRVSEGICIRLYSEDD+ SR EFTDPEILRTNLA+VILQM AL LGDIA F Sbjct: 426 SANQRSGRCGRVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANF 485 Query: 452 PFVEAPDKRNIQDGVRLLEELGAITTDEQA----------SAYKLTPLGRQLSQLPVDPR 501 PFVEAPD RNI DGVRLLEE+ A+ + E A +A +LT GR L++ P+DPR Sbjct: 486 PFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPR 545 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL 561 LA+MV+ + + GC+ + +II SALSIQDPRERP +KQQ SDEKH RF DK SDF++ +NL Sbjct: 546 LAKMVVSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNL 605 Query: 562 WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS------- 614 W Y+ EQ+K L+ N FR+LC+ ++L+Y+R+REWQDI++QL+ +KE I + S Sbjct: 606 WQYINEQKKDLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKEQQITLTSIDYQFSM 665 Query: 615 --------------------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 + + +H ALL+GLLSHIG +D ++ EY GAR +F I Sbjct: 666 PNVQQGQAASTAVDKTKETEQDSALTPVHQALLSGLLSHIGQQDENR-EYKGARGMKFFI 724 Query: 655 FPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 FPGS L KK PKW+M AELVETSRL+ R+ A+IDP W+EP+AQHL+KR YSEPHWE+ QG Sbjct: 725 FPGSALTKKSPKWLMSAELVETSRLFARMNAKIDPLWLEPLAQHLVKRNYSEPHWEKKQG 784 Query: 715 AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA 774 AVMA E+VT+YGL IV+ RK+N++ I+P CRE+FIR ALV GD + F +N +L Sbjct: 785 AVMAFEQVTLYGLSIVSKRKINFNVIEPVTCREIFIREALVNGDCVIKEKFLSKNQQLVE 844 Query: 775 EVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSM 834 +EELE K+RRRD L+D++ L +FY ++ V R F +WWKK RE LL+F K+ Sbjct: 845 SIEELEQKARRRDFLIDEQHLVDFYSDKLPDTVNCQRSFLAWWKKAKRENEQLLDFSKAF 904 Query: 835 LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQ 894 L+ E ++++S ++YP+ W Q ++ L L+Y F PG DG++V +P+ LLNQV+E GF+W Sbjct: 905 LLNESSDELSTIEYPDVWQQDSITLPLTYHFSPGDIDDGISVVLPIALLNQVQEVGFDWL 964 Query: 895 IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVT 954 IP LR EL IALIK+LPK +RRNFVPAPNYA+A L + + L D+L ++L RMTGV Sbjct: 965 IPALRDELAIALIKALPKTLRRNFVPAPNYAQACLAAMPAEQGHLQDALAKQLLRMTGVR 1024 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 + + W +P HL + F+VVDDK K +K+GR L +LK L+GKV+ ++ VA+ GIEQ Sbjct: 1025 LPEDAWQDITLPIHLTMNFQVVDDKGKLIKQGRDLNELKAELQGKVKASIKQVAEKGIEQ 1084 Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 + L W FG LP+ YE+K N +KA+PALVD ++SVAI+LF+ ++AM G+ RL+ Sbjct: 1085 ADLTKWDFGSLPKGYEKKVANITIKAFPALVDHKNSVAIELFEQEQHAQEAMLKGISRLI 1144 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDA------NGGPV 1128 LLNIP+P+KYL EKLPNKAKLGLYFNP+G + EL+ DCI L+ NG Sbjct: 1145 LLNIPTPLKYLQEKLPNKAKLGLYFNPFGSINELLQDCIQGACLSLVQQFSQHQNNGLLP 1204 Query: 1129 WTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQ 1188 E+ FA + VRAE+ D V+ A +VE+ LT + K++KG V + + DIK Q Sbjct: 1205 REEKQFAKCCDYVRAEIADCVLTAAIKVERALTLRHEVTKKMKGSVPLNVIQSHGDIKQQ 1264 Query: 1189 MGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI 1248 LV++GFVT +G +L D +RYLQ + +RLEKL DP++DR ++++V V +Q + Sbjct: 1265 CEQLVFKGFVTYSGLSKLDDIIRYLQGMLRRLEKLPSDPNQDRLKLIEVSKVNDMYQVIM 1324 Query: 1249 NKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 +K + D ++ RW+IEELR+S FAQ LGT PIS KRIL ++ S Sbjct: 1325 SKQRKDKPVDNELLATRWLIEELRISLFAQNLGTSAPISVKRILNYLKGFS 1375 >UniRef50_A1U107 ATP-dependent helicase HrpA n=4 Tax=Gammaproteobacteria RepID=A1U107_MARAV Length = 1312 Score = 1582 bits (4096), Expect = 0.0, Method: Composition-based stats. Identities = 618/1302 (47%), Positives = 869/1302 (66%), Gaps = 20/1302 (1%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + A+ +LD+ ++ R RR+ K + ++MA+ +DQ KV R Sbjct: 19 SRAAVKAMMNQLDACNQQEVARIIRRVSRCK----GNPGNKDLEKMAQWLDQGLDKVRKR 74 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 +A T+P LPVS + +DI +AI +HQVVI+AGETGSGKTTQ+PKIC+ LGRGI+G+ Sbjct: 75 QALHKPATFPAGLPVSDRVEDISDAINNHQVVIIAGETGSGKTTQIPKICLNLGRGIRGI 134 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRR+AAR+V++RIAEEL G IGY+VRF+D+ S+++ VK+MTDGILLAE+Q Sbjct: 135 IGHTQPRRIAARSVSSRIAEELGETVGQQIGYQVRFTDNTSESSRVKVMTDGILLAEVQH 194 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 DR L +YDT+IIDEAHERSLNIDFLLGYLK+LLP+RPDLK+IITSATI+ ERFS FN A Sbjct: 195 DRFLDRYDTLIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSATIEVERFSEFFNEA 254 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE------SHGDILIFMS 298 P+IEVSGRT+PV++RYRP+V + DD ++ + A+DE+ Q GD+L+F+ Sbjct: 255 PVIEVSGRTFPVDIRYRPLVGDEDDRDQGWTDGVLSALDEIEQHERQEKQPPGDVLVFLP 314 Query: 299 GEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVP 358 GEREIR + L +LRHTE+LPLY+RLSN EQNRVFQ H GRRIVL+TNVAETSLTVP Sbjct: 315 GEREIRALSKVLRHADLRHTEVLPLYSRLSNQEQNRVFQGHKGRRIVLSTNVAETSLTVP 374 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI+YVID G ARISRYS R+K+QRLPIEPISQASANQR GRCGRV+ GIC RLY E DFL Sbjct: 375 GIRYVIDTGVARISRYSVRSKIQRLPIEPISQASANQRAGRCGRVAPGICFRLYDETDFL 434 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 +RPE+TDPEILRTNLASVILQM GLG+I FPF+EAPD+R + DG +LLEEL A+ Sbjct: 435 NRPEYTDPEILRTNLASVILQMATSGLGEIRHFPFLEAPDRRQVNDGYKLLEELSAVDD- 493 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 ++T LGR +++LP+DPRLARM++ + + G + E +I+ + LS+QDPRERP DKQ Sbjct: 494 ----KRRVTRLGRTMARLPLDPRLARMLVTSAEQGSLAEVLIVIAGLSVQDPRERPQDKQ 549 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 QA+D+ H F+DKESDF +N+WN+ EQ++ LS N ++LC+ +L+++R+REW+DI+ Sbjct: 550 QAADQAHAPFNDKESDFATLLNIWNWFEEQRQELSQNQLKKLCQKTFLSWMRMREWRDIH 609 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QL + +E + +NS+PA Y +H A+L GLL + +K +K+EY RN + IFPGS Sbjct: 610 RQLTLICREQKLTLNSQPANYDAVHKAILGGLLGQVAVK-VEKREYLATRNRKVMIFPGS 668 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 + K PKW++ AE+VETS+++ R+ A I PEWVEP+A H++K Y EPHWE+ + VM Sbjct: 669 KVGKTAPKWIVAAEIVETSKVFARMVAAIQPEWVEPLAGHVVKHHYFEPHWEQKRAQVMG 728 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 EKVT+YGL +V R++ Y+++DPA CR LFIR ALVEGD+Q+R F N ++ VE Sbjct: 729 YEKVTLYGLDVVPKRRIPYAKVDPAECRNLFIRRALVEGDFQSRAPFIARNREMLDTVEN 788 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE K+RRRD+LVDDE L FYDQR+ D++S RHF+SWWK +S E L ++ +++ Sbjct: 789 LEKKTRRRDLLVDDEVLVAFYDQRLPSDIVSGRHFESWWKGLSAEELKKLELTETDVLQR 848 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 ++ S YP++ +K LSY+FEP ++ DGVT+++PL L Q+ EW +PGL Sbjct: 849 PLDETSAQQYPDYLEWEGVKYPLSYEFEPTSERDGVTLNVPLMALRQIPARRLEWLVPGL 908 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958 RE IAL+K LPK +RRNFVP P++ +A L ++P PL L +LRRMTGV +D + Sbjct: 909 LREKCIALVKGLPKALRRNFVPVPDFVDAALANLQPGNEPLAIKLGEQLRRMTGVQIDPD 968 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI---EQS 1015 W +++P HL++ RV DK K + E R +L+ L+G+ +E L++ D + Sbjct: 969 AWPEEELPRHLRMNLRVTGDKGKVIAESRDTDELQARLEGRAEEALASATRDEPGKKQAG 1028 Query: 1016 GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 W FG PE + ++G +V +PAL D + V + L + G+ RL++ Sbjct: 1029 EYTDWQFGTFPEQVQTEKGGMQVTVYPALEDLGNKVRASRCLDKLTAEDTHRRGVARLIV 1088 Query: 1076 LNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 + + L KLP + L F P G+ L+DD + V + A+ P TE+ FA Sbjct: 1089 NRFGNTLADLERKLPRFKQSALMFAPIGQAKGLLDDLVLSTVMQHFLADQLP-RTEQAFA 1147 Query: 1136 ALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYR 1195 L ++ R + + +++ Q + + K+LKG++++ +A ++D+K Q+ LV Sbjct: 1148 ELFDRHRGDFIPALEAADERLFQAMNGYQKVAKQLKGKINLALAASMADLKFQLQHLVSP 1207 Query: 1196 GFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR 1255 GF+ + L Y +A + RLEK+A + R+R + +E + + + + Sbjct: 1208 GFLVNTPVQWLERFGTYFEAADIRLEKMAREMGREREFLHTIEPLWARYAAKLEQQKRQG 1267 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 D +++ RWM+EE RVS+FAQQLGT +S KR+ + E+ Sbjct: 1268 VRDPELETYRWMMEEFRVSFFAQQLGTVMTVSAKRLDKQWEK 1309 >UniRef50_B9Z2A4 ATP-dependent helicase HrpA n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2A4_9NEIS Length = 1314 Score = 1581 bits (4095), Expect = 0.0, Method: Composition-based stats. Identities = 598/1321 (45%), Positives = 846/1321 (64%), Gaps = 39/1321 (2%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 L+ L S ++RDR R+L V +++K + ++A++I ++ G+ R Sbjct: 5 RPLAELKAALPSCLIRDRHGLKRKLADVEQRLKKQQPTDKLLADVAQQIARSQGRAEARS 64 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 A P+ + LPV+QK+++I AI HQVVI+ GETGSGKTTQ+PKIC+ELGRG+ GLI Sbjct: 65 ANLPKPEFDLALPVNQKREEIRAAIAKHQVVIICGETGSGKTTQIPKICLELGRGVYGLI 124 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRRLAAR+VA RIA+EL +E G +G+KVRF+D +SD +++KLMTDGILLAE Q D Sbjct: 125 GHTQPRRLAARSVATRIAQELGSELGAHVGFKVRFTDKLSDKSVIKLMTDGILLAETQTD 184 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 R L YDTIIIDEAHERSLNIDFLLGYLK++LPRRPDLK+I+TSATID ERF+RHF+ AP Sbjct: 185 RYLEAYDTIIIDEAHERSLNIDFLLGYLKQMLPRRPDLKVIVTSATIDAERFARHFDGAP 244 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIR 304 +IEVSGRT+PVEVRYRP+ E +D +++ AI DAVDE+S+ GD+L+F+ GEREIR Sbjct: 245 VIEVSGRTFPVEVRYRPLKERDEDEREVEMEDAIVDAVDEISRHGPGDMLVFLPGEREIR 304 Query: 305 DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVI 364 DTA+ L K +R EILPL+ARLSN +Q ++F+ GRRIVLATNVAETSLTVPGIKYVI Sbjct: 305 DTAEKLRKSGIRGYEILPLFARLSNEDQQKIFKPSGGRRIVLATNVAETSLTVPGIKYVI 364 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G AR++RYS R KV++L +E ISQA+A QR GRCGRV G+C+RLY EDDF +RP FT Sbjct: 365 DTGLARLNRYSPRAKVEQLQVEKISQAAARQRAGRCGRVEAGVCVRLYGEDDFNARPAFT 424 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 DPEI+R+NLA+VIL+M AL LG + FPF+EAP R I DG ++L ELGA+ + Sbjct: 425 DPEIVRSNLAAVILRMAALRLGRVDDFPFLEAPSSRLIADGYQVLTELGAVDEKSE---- 480 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LTP+G++L++LP+DP++ RM+L A+ GCVRE +II +ALSIQDPRERP + ++A++ Sbjct: 481 -LTPVGKELARLPIDPKIGRMLLAARDLGCVREVLIIAAALSIQDPRERPFEAREAAERA 539 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSN-AFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 ++F D++SDFL+F++LW++ + K SN LC +L+YLR+REW++++ QL + Sbjct: 540 QQKFADEKSDFLSFLHLWDFFQDALKHKKSNRQLINLCHEHFLSYLRMREWRELHGQLAE 599 Query: 604 VVKELGIPVNSEP-----------------------AEYREIHIALLTGLLSHIGMKDAD 640 + E+G+ E Y +H ALLTGL+ ++GMK + Sbjct: 600 IAAEMGLIQRHEAHADAEPSANLEQLSVKKRQQLDAVAYERLHQALLTGLIGNLGMKSQE 659 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 +Y G R F +FPGSGL K PKW++ AELVET++L+ R +++PEWVE +A HLI Sbjct: 660 SDDYLGTRGVHFHVFPGSGLKKAKPKWLVAAELVETTKLYARCVGKVEPEWVEKLAPHLI 719 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 K Y +PHWE+ +G V+A+E+VT+YGL +V R V+Y +I P RELFIR ALV ++ Sbjct: 720 KYHYFDPHWEKTRGEVVASERVTLYGLTLVPRRPVSYGRIAPEEARELFIRGALVAMEYA 779 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 + +F+ N +L EVE+LEHK+RR+D+LVD++ LF FY +RI V+ A F++W K+ Sbjct: 780 SNAPWFQRNQQLIREVEQLEHKARRQDVLVDEDALFAFYAERIPAHVVDAASFEAWRKEA 839 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 + P L + L++ A+ ++ +P + + KLRL Y+FEP DGVTV +PL Sbjct: 840 EQADPKRLFLTREELMRHAAQHVTVNQFPEWLEHEDGKLRLKYRFEPNHPLDGVTVDVPL 899 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 +LN++E + FEW +PG+ RE + +IKSLPK VRR VP P++ FL P+ Sbjct: 900 AILNRLEPAPFEWLVPGMIREKLQLMIKSLPKQVRRTCVPVPDFVTRFLSANPDTTQPIA 959 Query: 941 DSLERELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGK 999 L R + R T GV V +D+ +P HL FRV+DD +++ GR L L+ Sbjct: 960 PQLARFILRETGGVKVAVDDFDLATLPAHLLFNFRVIDDGKQEIGLGRDLLALQKQFGQA 1019 Query: 1000 VQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP 1059 Q T E+ + W FG+LP + + RG ++ +PAL E D VAI+L+D Sbjct: 1020 AQLTF-RDTSAEFERDDVTSWDFGELPAAIQFARGRQQLTGYPALTLETDKVAIRLYDTE 1078 Query: 1060 LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDK 1119 ++A G+ RLL L + +K L + LP +LGL + +L+ D I+C D+ Sbjct: 1079 YAAQRAHRQGVVRLLQLQLKEQMKQLGKGLPGMTQLGLQLRGVANIDDLLADAIACICDR 1138 Query: 1120 LIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMA 1179 + P TE+ F + R L + + + QI + +L Sbjct: 1139 AFIGDDEPPRTEKAFNDQKARARTRLPAVIQAVTAYLNQIAGEYQALQPKLAKH------ 1192 Query: 1180 LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN 1239 ++ Q+G LVY+GF++ + +L RYL+A+ R++K + RD + ++ Sbjct: 1193 KLGRELTEQLGRLVYKGFLSATPWSQLPHLPRYLKAMSLRMDKQVANAQRDGQRAAEIRQ 1252 Query: 1240 VQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + W+ + + + E RW IEELRVS FAQ+L TPYP+S KR+++ E IS Sbjct: 1253 LWTLWETRLAEAEDKGEATPALAEFRWKIEELRVSLFAQELKTPYPVSLKRLMKEWESIS 1312 Query: 1300 G 1300 G Sbjct: 1313 G 1313 >UniRef50_Q21LQ8 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=Q21LQ8_SACD2 Length = 1296 Score = 1556 bits (4029), Expect = 0.0, Method: Composition-based stats. Identities = 625/1274 (49%), Positives = 869/1274 (68%), Gaps = 17/1274 (1%) Query: 30 RLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 R + ++K + +++AK+I+QA + R+AA P I++P+ LP+S+K+ DI E Sbjct: 29 REKIIARIKREQPVDKLVEQLAKDIEQAQAVLAARKAAVPAISFPEQLPISEKRADIAEL 88 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 I ++QVVI+AGETGSGKTTQLPKIC+ELGRGI+GLIGHTQPRR+AARTVA+RIA+EL+ Sbjct: 89 IANNQVVILAGETGSGKTTQLPKICLELGRGIRGLIGHTQPRRIAARTVADRIAQELQVP 148 Query: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY+VRF+DHV+D+T++KLMTDGILLAEIQQD LL++YDT+IIDEAHERSLNIDFL Sbjct: 149 LGDAVGYQVRFTDHVTDSTLIKLMTDGILLAEIQQDPLLLKYDTLIIDEAHERSLNIDFL 208 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 LGYLK++L +RPDLK+I+TSATID +RFS+HFNNAP+IEVSGRTYPVEV YRP +E + Sbjct: 209 LGYLKQILAKRPDLKLIVTSATIDLDRFSKHFNNAPVIEVSGRTYPVEVLYRPWHDEFE- 267 Query: 270 TERDQLQAIFDAVDEL---SQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYAR 326 D QAI +AV+E+ S+ GD+L+F+SGER+IR+ + AL K NL H EI+PLYAR Sbjct: 268 ---DLTQAIVNAVEEIQSISKGRGGDVLVFLSGERDIREASHALKKANLPHWEIVPLYAR 324 Query: 327 LSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 LS EQNRVF H GRR+VLATNVAETSLTVPGI+YVIDPGTARI RYS RTKV+RLP+E Sbjct: 325 LSLEEQNRVFSPHKGRRVVLATNVAETSLTVPGIRYVIDPGTARIKRYSLRTKVERLPVE 384 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446 ISQASANQRKGRCGRVS+G+CIRLY +DF SR EFTDPEILR+NLA+VILQM + +G Sbjct: 385 NISQASANQRKGRCGRVSDGVCIRLYDREDFESRSEFTDPEILRSNLAAVILQMLQMRIG 444 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 D+ FPFV+ PD R I DG +LLEELGA+ + ++T LGR L QLP+DP+ RM+ Sbjct: 445 DVRKFPFVDKPDNRLINDGFKLLEELGAVD-----KSNRVTKLGRDLQQLPLDPKFGRMI 499 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 + A + GC+RE +II S L+IQDPRERP DKQQA+DEKHRRF D++SDFL+ VNLW+Y+ Sbjct: 500 VAAAEQGCLRELLIIVSGLTIQDPRERPADKQQAADEKHRRFWDEKSDFLSLVNLWHYVE 559 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIAL 626 EQ++ LS N R+LC+ ++LN++R+REW++++ QLR +K++G N EPA Y +H AL Sbjct: 560 EQRQELSQNQLRKLCQKEFLNFMRLREWRELHHQLRVTIKKMGFKENQEPASYDVVHEAL 619 Query: 627 LTGLLSHIGMKD--ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIA 684 LTGLLS++G K+ D ++Y G RN +F IFPGS L KK PKW+ AE++ETS+++ Sbjct: 620 LTGLLSNMGNKNEEPDARDYRGTRNRKFMIFPGSALRKKRPKWLFAAEMIETSQVYAHCV 679 Query: 685 ARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPAL 744 A+++PEW HL+K Y EPH+++ G V A +++++GL ++ ++V YS+IDPA Sbjct: 680 AQMEPEWALKSGAHLLKYNYFEPHYDKRAGQVKAFVRISLFGLVLIEKKRVGYSKIDPAE 739 Query: 745 CRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRIS 804 RE+FIR ALVEG ++ + AFF +N L AEVE+LE KSRR+DI+VDDE LF FY++ I Sbjct: 740 AREVFIRAALVEGQYRGKGAFFNKNNALIAEVEDLEAKSRRKDIMVDDEVLFNFYNEIIP 799 Query: 805 HDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQ 864 D+ + F+ W KK+ PD L + +L+ GAE +++ +P+ + L +SY Sbjct: 800 PDICNLAGFEHWRKKLEETQPDALLLSRDLLMLHGAEGVTEAQFPDQLDFDGVTLPVSYH 859 Query: 865 FEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNY 924 FEPG DGV+V +P+ LL+ + + W +PGL R+ IAL+K+LPK R+ VP P + Sbjct: 860 FEPGHPQDGVSVKVPVTLLHMLSDLYLPWLVPGLLRDKCIALVKALPKAKRKKVVPVPQF 919 Query: 925 AEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLK 984 + + R+ + L ++L REL+R+ + + +DW + + VVD K L Sbjct: 920 VDRAMARMTRSKASLTEALTRELKRLADIELTEDDWDETALEPFYHMNVIVVDAAGKPLD 979 Query: 985 EGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPAL 1044 +GR L L++ +G VQE+L + A EQ+ L W+F LPE+ + +G V+ +PAL Sbjct: 980 QGRDLNALRERYRGHVQESLQS-AGSSFEQTELTGWTFESLPETVDLDKGGVTVRGFPAL 1038 Query: 1045 VDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 D+ SV++++ DNP E QA GL RL L + ++YL ++L +GL GK Sbjct: 1039 QDDTSSVSLRVLDNPAEAYQASLAGLARLACLQLGQSVRYLQKQLLKGKDIGLTMVDLGK 1098 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 +++DD + V + + T F + EL + + IL V Sbjct: 1099 RDQVVDDILMAAVYRACFLDKPFPRTATEFKQCVDAGAGELVSIAQEYETLLLDILKYVV 1158 Query: 1165 NINKRLKG-RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 I K +K + +AL DI Q+ L+Y+GF+ + L RYL AIE R+EK Sbjct: 1159 AIKKAMKSNKSAFALALAFGDINQQLAQLIYKGFMFATPVQWLKQYPRYLNAIEVRIEKA 1218 Query: 1224 AVDPHRDRAQMLKVENVQQAWQ-QWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGT 1282 A +P +DR + ++ + Q Q + + + + ++ +E RWM+EELRVS FAQ L T Sbjct: 1219 AQNPQKDRVAIAELIGLWQKHQDRLLKEGSHSYIQNTAWQEYRWMLEELRVSLFAQTLKT 1278 Query: 1283 PYPISDKRILQAME 1296 P+S KR+ + + Sbjct: 1279 LMPVSAKRLNKQWQ 1292 >UniRef50_Q1N0P2 ATP-dependent helicase HrpA n=1 Tax=Bermanella marisrubri RepID=Q1N0P2_9GAMM Length = 1298 Score = 1551 bits (4016), Expect = 0.0, Method: Composition-based stats. Identities = 629/1299 (48%), Positives = 880/1299 (67%), Gaps = 21/1299 (1%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 L +++D ++RDR F +++ +KK +++ F+++A+++ ++ V RE Sbjct: 3 ELDLLAKQIDETLIRDRHGFRKQVGYLKKRLQSKQPIDKGFEKLAQQMQKSIDIVSHREQ 62 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 P + + D LP++QKKQ+I E I ++QVV++AGETGSGKTTQLPKICMELG G I Sbjct: 63 DCPRLEFDDQLPINQKKQEIAETIANNQVVVIAGETGSGKTTQLPKICMELGLAKYGKIA 122 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRRLAAR+VA+RIA+E G +GY+VRF+D D++++KLMTDGILLAE Q DR Sbjct: 123 HTQPRRLAARSVADRIAQECNVPLGEQVGYQVRFTDQSKDSSLLKLMTDGILLAETQNDR 182 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L QY IIIDEAHERSLNIDFLLGYLK+LLP+RPDLK++ITSATID +RFS HF+NAP+ Sbjct: 183 FLNQYQVIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVVITSATIDLQRFSEHFDNAPV 242 Query: 247 IEVSGRTYPVEVRYRPI--VEEADDTERDQLQAIFDAVDELSQESH-----GDILIFMSG 299 IEVSGRTYPVEVRYRPI V+ D+ E D Q I DAVDEL +E GD+L+F+SG Sbjct: 243 IEVSGRTYPVEVRYRPIVDVDTDDEQEGDMYQGIIDAVDELEREDAKRGQIGDVLVFLSG 302 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVP 358 EREIR+ + AL K NL+ TEILPLYARL++SEQ R+F+ G RRIVL+TNVAETSLTVP Sbjct: 303 EREIREASLALKKANLKQTEILPLYARLNSSEQQRIFKPTGGKRRIVLSTNVAETSLTVP 362 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI+YV+D G AR+SRYSYR+KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE+DFL Sbjct: 363 GIRYVVDTGVARVSRYSYRSKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFL 422 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 SRPEF+DPEI RTNLA+VILQM +L LGD+ AFPFV+APD R I+DG LL+EL A+ Sbjct: 423 SRPEFSDPEIQRTNLAAVILQMLSLRLGDVNAFPFVDAPDNRFIKDGYNLLKELSAVDKK 482 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 +T +GRQLS+ PVDPR+AR+++EA + EA+II SALSIQDPRERP++KQ Sbjct: 483 NN-----ITRIGRQLSRFPVDPRIARVLIEANAKHALAEALIIASALSIQDPRERPVEKQ 537 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 Q +D+KH F D ESDF+ +N+WN+ EQ++ALS+N R++C+ +LNY+R+REW+D++ Sbjct: 538 QQADQKHAEFRDDESDFITLINIWNWYEEQRQALSNNQLRQICKKHFLNYMRMREWRDVH 597 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QLR + KEL N E + Y ++H +L+G LSHIG K D+ +Y GARN RF +FPGS Sbjct: 598 YQLRILCKELKFVENKEVSSYDQLHKCILSGYLSHIGQKS-DENDYKGARNRRFLLFPGS 656 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 G+FKK PKWV+ AELVETS+L+GR+ A I PEW+EP+A++L+K+TY EPHW +G VMA Sbjct: 657 GIFKKRPKWVVSAELVETSKLYGRMNATIQPEWLEPLAKNLVKKTYLEPHWSIKRGQVMA 716 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 E+V+++GL I+ R++ Y+QIDP + E+FIR ALV+G +T+ F N L EV E Sbjct: 717 YEQVSLFGLIIIPRRRIGYAQIDPVVSHEIFIREALVQGQIKTQGDFLEYNQALMEEVAE 776 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE KSRRRDI++D+E LF+FY +R+ D+ F+ W KK +T L EKS L++ Sbjct: 777 LEDKSRRRDIVIDEERLFQFYFERVPDDIADTASFEKWRKKNGDDT---LLIEKSYLMQH 833 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 A +++ +P+ + G++ LSY+FEPG DGV+V +P P+L Q+ EW +PG+ Sbjct: 834 AASDVTEAQFPDHFSHGSVIYPLSYRFEPGHAEDGVSVMVPAPILKQLPVGRLEWLVPGM 893 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958 R+ VIAL+K+LPKP+R+ VP P++A+ FL + + LL + + + + V + Sbjct: 894 IRDKVIALLKALPKPIRKQLVPVPDFADGFLSQQPNRDQSLLAEICAYVYQQKRIKVSAD 953 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 D++ + DH ++ +V+ ++ L +GR Q L D + V E SA ++ IE+ G+ Sbjct: 954 DFNIASIDDHYRMNIKVIGAEDDLLAQGRDWQKLLDEVGD-VAEQFSADEENDIERQGIT 1012 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 W F +LP Y+ + +V +PAL+D++ SV IKL D EQ G+ RLL L + Sbjct: 1013 QWDFNELPLEYQLTQAGIQVTLYPALIDQQTSVDIKLLDRADEQAVQTRKGILRLLQLEL 1072 Query: 1079 PSPIKYLHEKLPNKA-KLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 + +H+ + + + +Y++ G EL++ P T + + Sbjct: 1073 KDQVSVIHKSVQKQLVQEIIYYSQLGNKTELLESITRQVFANSFCWQDNP-HTHSDYIKV 1131 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 ++ RA + + + +I + IL +NK LK + A +SDIK Q+ L+ +GF Sbjct: 1132 KDEGRANIGECLDEILPITKDILKQYHELNKALKKHNQLAFAFAVSDIKHQIQALMPKGF 1191 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 + + L RY++++ +RL KL + +D+ Q LKV + +Q+ ++ LP + Sbjct: 1192 LGFVPLEWLKHYPRYIKSMIQRLTKLQGNVQKDKLQQLKVSAWNEEYQKLLSDLPASLDC 1251 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 +V + WMI+E RVS FAQ+LGT P+SDKR ++ Sbjct: 1252 YPEVLTLNWMIQEYRVSLFAQELGTVIPVSDKRWKAQLQ 1290 >UniRef50_Q0A864 ATP-dependent helicase HrpA n=9 Tax=Gammaproteobacteria RepID=Q0A864_ALHEH Length = 1341 Score = 1550 bits (4013), Expect = 0.0, Method: Composition-based stats. Identities = 621/1336 (46%), Positives = 858/1336 (64%), Gaps = 51/1336 (3%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 L+ R+D R +RL G+ ++ + ++ ++I A + R A Sbjct: 13 ALRQLRPRIDRAFGPARPALRKRLAGLERRAHDGKPFDKGLVKLERDIAVACQRAETRAA 72 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 P + +LPV+Q+ D+ EAIRDHQVV++ G TGSGK+TQ+PKICM LGRG+ G IG Sbjct: 73 NLPSPRFDPSLPVNQRLDDLREAIRDHQVVVICGATGSGKSTQIPKICMALGRGVHGWIG 132 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRRLAART+A RI++EL T G +GYKVRF+D VS+ T +KL+TDG+LLAEIQ+DR Sbjct: 133 HTQPRRLAARTLAQRISDELGTALGEAVGYKVRFTDQVSERTHLKLLTDGMLLAEIQRDR 192 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L YDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+IITSATIDPERFS+HF+ API Sbjct: 193 HLDAYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVIITSATIDPERFSKHFDEAPI 252 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES-HGDILIFMSGEREIRD 305 +EVSGRTYPVEVRYRP+V++ D+ + D A+ +AV EL++E GD+L+F+SGEREIR+ Sbjct: 253 LEVSGRTYPVEVRYRPMVDDEDERDEDLPGAVVEAVHELAREPGQGDVLVFLSGEREIRE 312 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVI 364 +AL K + HTE+LPLYARLS +EQ RVF G RR+VLATNVAETS+TVPGI+YV+ Sbjct: 313 CTEALRKKHPPHTEVLPLYARLSAAEQQRVFNPKGGGRRVVLATNVAETSVTVPGIRYVV 372 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G ARI+RYSYRTKV RLPIEPISQASANQR GRCGR + G+ IRLYSE+DF R FT Sbjct: 373 DSGYARINRYSYRTKVSRLPIEPISQASANQRAGRCGREAPGVAIRLYSEEDFAGRSAFT 432 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 DPEI RTNLA+VILQM ALGLGDI FPFVE P+ + + DG +LL ELGA+T D + Sbjct: 433 DPEIQRTNLAAVILQMKALGLGDIQRFPFVEPPEHKFVNDGFKLLHELGAVTEDRE---- 488 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT LGRQL++LP+DP + RM+L A++ G + E ++I +ALS+QDPRERP+D QQA+D+ Sbjct: 489 -LTALGRQLARLPLDPPVGRMLLAAREQGVLDEVLVIAAALSVQDPRERPLDAQQAADQA 547 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H ++ +SDFL+ V LW Q++ LS+ R+ CR +L+ R+REW DI+ Q+R++ Sbjct: 548 HAQWRHGKSDFLSLVLLWQDYHRQKRRLSNRQLRQWCRERFLSPHRMREWLDIHRQIREL 607 Query: 605 VKEL-------------GIPVNSEPAE-------------------------YREIHIAL 626 V L G P+ S +E Y +H AL Sbjct: 608 VSGLSGGADRKGAGGGPGRPLRSTGSEGAAASPLARPHTVTTEQCAEWLDTHYEALHRAL 667 Query: 627 LTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAAR 686 L GL+S+I +K EY G R + IFPGSG FK+ PKW++ AE VETSRL+ R AA Sbjct: 668 LAGLVSNIAQHHENK-EYLGPRGVKLMIFPGSGQFKRNPKWIVAAEFVETSRLFARTAAE 726 Query: 687 IDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCR 746 + PEW+E A HL+ R+Y+EPHWE+ V A EKVT+YGL + + R+VNY IDP + R Sbjct: 727 VKPEWIEQTAAHLVSRSYAEPHWEKKPAQVAAYEKVTLYGLVLASQRRVNYGPIDPPVAR 786 Query: 747 ELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHD 806 +FIR ALV+G+++TR F+ N +L E+E LE K+RRRD+LVD+ET F FYDQRI Sbjct: 787 AIFIREALVQGEYRTRAPFWEHNRRLIEEIERLEAKARRRDVLVDEETRFRFYDQRIPEG 846 Query: 807 VISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQ-GNLKLRLSYQF 865 + S F+ W +VSR+ P L+ + L+++ A+ +S YP+ G L+L L Y Sbjct: 847 IYSGAAFERWLGEVSRDDPKRLHMSREALMRDDADPVSGEAYPDRLRLPGGLELPLEYHL 906 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 EPG++ DGV +P+ LNQ+ FEW +PGL E V+ALI+ LPK +RRNFVPAP++A Sbjct: 907 EPGSELDGVVARVPVAALNQLRPEPFEWLVPGLVHEKVVALIRGLPKAIRRNFVPAPDFA 966 Query: 926 EAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 A L + E L D++ R+L+RMTGV + +P+HL++ +RV+D++ L+ Sbjct: 967 RAVLEAIPHGEGSLTDAVARQLKRMTGVDIPPGALDAVALPEHLRMHYRVLDEQGNTLRT 1026 Query: 986 GRSLQDLKDALKGKVQETLSAVAD--DGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPA 1043 G L L+ L + E+ SA + G+ W FG LPE+ E R ++ +P Sbjct: 1027 GSDLAALQQGLGDQASESFSASGGGASEWTREGITTWDFGDLPEAVEIGRNGLTIRGYPC 1086 Query: 1044 LVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 LVDE SV + L D+P E ++ G+RRL +L +P ++YL LP +L L + G Sbjct: 1087 LVDEESSVRLTLADSPDEAERQHRAGVRRLYMLALPQQVRYLRRGLPGLDRLRLAYRGLG 1146 Query: 1104 KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 +L + + VD+ + P TE F E+ R L + +A+ +E++L Sbjct: 1147 SDEDLKRELVHAAVDRTFLGD-APPRTEAAFRQRLERGRPRLVENAQRLAEGLEEVLGRY 1205 Query: 1164 FNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 I K LK + + L D++ + LVY GF+ + L + RYL+A+E+R+EKL Sbjct: 1206 QAIRKALKQFNALALMDSLKDLQEHLECLVYPGFLQQTPPEYLAELPRYLRALERRVEKL 1265 Query: 1224 AVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTP 1283 DP RDR + + + W++ ++ + D ++ RW++EE RVS FAQ++G Sbjct: 1266 RQDPGRDRTPLRSIRPWWERWRERQSRREAQGKPDPALERFRWLLEEYRVSLFAQEVGAR 1325 Query: 1284 YPISDKRILQAMEQIS 1299 +S+KR+ A ++++ Sbjct: 1326 EKVSEKRLKAAWKEVA 1341 >UniRef50_Q0S1M3 ATP-dependent helicase hrpA n=5 Tax=Corynebacterineae RepID=Q0S1M3_RHOSR Length = 1296 Score = 1547 bits (4007), Expect = 0.0, Method: Composition-based stats. Identities = 710/1301 (54%), Positives = 927/1301 (71%), Gaps = 22/1301 (1%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 + L+ L L LRD R + + + PDA ++ E+A + A ++ + Sbjct: 7 SRRELKNSLGELTLRDEHRLR---RRLDRARTPDALASLSDEIAAARGRIARRL----DS 59 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P I YPD+LPVSQ++ DI +AI ++QVVIVAGETGSGKTTQ+PKIC+ELGRG++GLIGH Sbjct: 60 VPVIEYPDSLPVSQRRDDIAKAIAENQVVIVAGETGSGKTTQIPKICLELGRGVRGLIGH 119 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAARTVA RIAEEL++E G +GY VRF+D VSD T+VKLMTDGILLAEIQ+DR+ Sbjct: 120 TQPRRLAARTVAERIAEELRSELGETVGYTVRFTDQVSDGTLVKLMTDGILLAEIQRDRM 179 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN---- 243 L +YDT+IIDEAHERSLNIDF+LGYL++LLPRRPDLK+IITSATIDPERF++HF Sbjct: 180 LRRYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPERFAQHFATDDGV 239 Query: 244 -APIIEVSGRTYPVEVRYRPIVEEADD--TERDQLQAIFDAVDELSQESHGDILIFMSGE 300 API+EVSGRT+PVE+RYRP+ + D +RD + A+ +AV+ELS E GDIL+F+SGE Sbjct: 240 PAPIVEVSGRTFPVEMRYRPLTVDVGDQTFDRDPVDAVCEAVEELSGEGDGDILVFLSGE 299 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIRDTADAL LR TEI+PLYARLS +EQ++VF H+GRR+VL+TNVAETSLTVPGI Sbjct: 300 REIRDTADALRDRRLRGTEIVPLYARLSAAEQHKVFTPHTGRRVVLSTNVAETSLTVPGI 359 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 +YV+DPGTARISRYS RTKVQRLPIEPISQASA QR GRCGRV+EGICIRLYSE+DF +R Sbjct: 360 RYVVDPGTARISRYSVRTKVQRLPIEPISQASARQRSGRCGRVAEGICIRLYSEEDFEAR 419 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P FT+PEILRTNLASVILQMTALGLGDIAAFPFV+ PD R ++DG+ LLEELGAI Q Sbjct: 420 PAFTEPEILRTNLASVILQMTALGLGDIAAFPFVQPPDPRAVRDGIGLLEELGAIERKAQ 479 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 LT +GR+L+Q+PVDPR+ARM++EA ++GC+ E ++I SALSIQD RERP + QQA Sbjct: 480 NEQPVLTAVGRELAQIPVDPRMARMLVEAHRNGCLAEVLVIVSALSIQDVRERPAEFQQA 539 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +DEKH RF + SDFLAF+ LW YL EQ+ LSSN FR++CR ++L++LR+REWQD++ Q Sbjct: 540 ADEKHARFTVENSDFLAFLELWKYLREQRNELSSNQFRKMCRNEFLHWLRIREWQDLHGQ 599 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 LRQ+ + LG PA IH +LL GLLSHIG+++ DK+++ GAR +RF++FPGS L Sbjct: 600 LRQITRGLGWDTTDTPAGEAAIHQSLLAGLLSHIGLREGDKRDFLGARGSRFAVFPGSSL 659 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 FKKPP+WVM AELVETSRLW R++ARI+PEW E +A HL+KRTYSEPHW +GA MA E Sbjct: 660 FKKPPRWVMAAELVETSRLWARMSARIEPEWAEKLAPHLVKRTYSEPHWSSKRGAAMAYE 719 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +VT+YG+P+VA R V YS IDP R+LFIRHALV+G+WQT+H FF N L +VEELE Sbjct: 720 RVTLYGIPLVARRAVTYSTIDPETSRDLFIRHALVQGEWQTQHKFFHANRALLEDVEELE 779 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 H++RRRDILVDD+TL++FYDQR+ + +SARHFDSWWK R+ PDLL F ++ ++ + Sbjct: 780 HRARRRDILVDDDTLYDFYDQRVGPEAVSARHFDSWWKVARRKNPDLLTFTQATVVNAES 839 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 + +YP+ W QG+++ L+YQFEPG + DGVT IP+ LL + GF+W +PG+R Sbjct: 840 AAVLGGEYPDAWRQGDMQFPLTYQFEPGTEDDGVTARIPIALLAGLRPVGFDWLVPGMRV 899 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 ELV ALIK+LPK +RR VPAP++A A L VKP PL ++ REL R+ +D +D+ Sbjct: 900 ELVTALIKTLPKTLRRQVVPAPDFAAAALAAVKPRSEPLTMAMARELSRLGACRIDPKDF 959 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 +PDHL++TF VD+K L + L L+ +L +V+ ++ A + E+ W Sbjct: 960 DVTALPDHLRMTFAAVDEKGAVLGRDKDLVSLRKSLAPRVEVEVAKAASNS-ERPPALTW 1018 Query: 1021 ---SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLN 1077 + G L + ++ G KV +PALV E D VA+++ Q+ AM G RRLLL Sbjct: 1019 TPATLGSLEATVTRELGGQKVTGYPALVPEGDGVAVRVLSTAAAQRSAMRAGTRRLLLAA 1078 Query: 1078 IPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 +P+ K + L N +L L NP G + LIDDC + +++I A+G PV T + F AL Sbjct: 1079 VPTQAKTVTSGLSNAQRLALGQNPDGSLDALIDDCRNAAANQVIAAHGTPVRTPQEFDAL 1138 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 RAE+ V + + V +L A + L+ D++ Q L++ GF Sbjct: 1139 VATARAEMARNVAVLLRLVSPVLEADHRLTVVLER----ATGEAADDVREQRQSLLFPGF 1194 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 V G RL + RYL A RL+ L RD+ M ++ V +++ + LP R+ Sbjct: 1195 VADIGATRLRELPRYLAAAAARLDALPGSAPRDQKGMDVLDRVYAGYERMLAGLPEERQH 1254 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +V I WMIEELRVS FAQ LGTP P+S+KR++ AME++ Sbjct: 1255 TPEVDAIHWMIEELRVSLFAQTLGTPIPVSEKRVISAMEKV 1295 >UniRef50_A6VYA9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=A6VYA9_MARMS Length = 1308 Score = 1537 bits (3979), Expect = 0.0, Method: Composition-based stats. Identities = 603/1311 (45%), Positives = 853/1311 (65%), Gaps = 24/1311 (1%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRF-SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAG 59 + K + L +++M RDR +++ K+ K+ + E+ I+++ Sbjct: 5 FSAPSKKDTSLLIMPTNAVMTRDRHLIDQKQVQLSKRQKDGLPFDRMQAELNALIEKSET 64 Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 R++ P++TY ++LPV+ + +I++AI+D+QVVI+AGETGSGKTTQLPK+C++ GR Sbjct: 65 LYQARQSRMPKVTYDESLPVATRADEIIKAIQDNQVVIIAGETGSGKTTQLPKMCLQAGR 124 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 GI GLIGHTQPRR+AAR+VA RI++EL+ G +G++VRFSD ++ T++KLMTDGILL Sbjct: 125 GIAGLIGHTQPRRIAARSVAERISDELQVNLGEQVGFQVRFSDESNEETLIKLMTDGILL 184 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 AEIQQD+ L +YDTIIIDEAHERSLNIDFLLGYLK++L RPDLK+I+TSATID ERFS Sbjct: 185 AEIQQDKRLYKYDTIIIDEAHERSLNIDFLLGYLKQVLAARPDLKVIVTSATIDVERFSE 244 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD----QLQAIFDAVDELSQESH----- 290 HF NAPIIEVSGRTYPVE+RY+P++ ++D E D Q I DAV+ L E Sbjct: 245 HFENAPIIEVSGRTYPVEIRYQPLLSKSDSEELDEDQSMEQGILDAVELLIAEERQSGYR 304 Query: 291 --GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 GDIL+F+ GEREIRDTA+ L + LR TE+LPLYARLS SEQ R+F+SHSGRRIVL+T Sbjct: 305 GAGDILVFLPGEREIRDTAEILRRAELRSTEVLPLYARLSASEQQRIFKSHSGRRIVLST 364 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 NVAETSLTVPGI+YVIDPG ARISRYS R+KVQ+LPIE ISQASANQR GRCGRV++GIC Sbjct: 365 NVAETSLTVPGIRYVIDPGLARISRYSVRSKVQQLPIEKISQASANQRAGRCGRVADGIC 424 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 IRLY E+DF +RPEFTDPEI RTNLASVILQM L LG + FPFVE P+KR I DG R Sbjct: 425 IRLYDEEDFNNRPEFTDPEIFRTNLASVILQMANLKLGAVEKFPFVEMPEKRMINDGYRA 484 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L ELGA+ + +LTP+GRQL++LP+DP+L R+++ A++H ++E II SALSI Sbjct: 485 LTELGALHKE------RLTPIGRQLAKLPIDPKLGRILIAAEQHSVLKEVAIIVSALSIA 538 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 DPRERP DK+ SD+ H D++SDFL F+NLW EQ++ALS N R+ CR +LN+ Sbjct: 539 DPRERPQDKKTQSDQAHAVDKDEDSDFLVFLNLWERFEEQRQALSQNQLRQYCRKQFLNF 598 Query: 589 LRVREWQDIYTQLRQVVKELGIP-VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGA 647 +R+REW+DI+ Q+ K+LG V E Y IH ALL G+ + + K D +E G Sbjct: 599 MRMREWRDIHRQIMIACKQLGFKEVQHEERHYEAIHRALLAGMFTQVANKMEDSKEMLGC 658 Query: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 R+ + +IFPGS LFKKPP+W+M AEL+ETS+L+ R+ ARIDP W+E A +KR Y +P Sbjct: 659 RSRKLAIFPGSMLFKKPPQWIMAAELIETSKLYARVTARIDPAWIEEYAAPFVKRQYFDP 718 Query: 708 HWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFR 767 H+ER QG VMA E+V++YGL IVA R+++Y + P RE+FIR LVEG+ +T+ AFFR Sbjct: 719 HFERNQGRVMANEQVSLYGLIIVAKRRIDYGHVHPEDAREIFIRSGLVEGELRTKQAFFR 778 Query: 768 ENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDL 827 +N L +E E K R+RDILVDDET+F FY+ R+ V + + + + K +PD Sbjct: 779 KNKALMELLEAQEAKLRKRDILVDDETVFAFYNSRLPDHVRNLKSLEHFVKT----SPDA 834 Query: 828 LNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVE 887 L + LI + + +P+ + + L + Y+F+PG ADG T+ +P+ LL Q+ Sbjct: 835 LLMTREDLINQDV-SVDDQAFPDSFGLNGVALPIDYKFDPGQAADGATLKVPVGLLRQLS 893 Query: 888 ESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLEREL 947 W +PG +E AL+++LPK +RR FVP P + + + + LL+ L ++ Sbjct: 894 LEDLGWAVPGFIKERCEALLRALPKALRRRFVPIPQFVDRIYPNLSKDKGDLLEQLSLQI 953 Query: 948 RRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV 1007 +R T + + +W+ D++ HL + VVD++ K L G++L L+ V+E+ + Sbjct: 954 KRETLIDIPLNEWNADKLDSHLTLNLEVVDERGKVLGVGKNLAQLQTQFSDLVEESFAKF 1013 Query: 1008 ADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMW 1067 EQ GL W +PE E K+ KV A+PALV + D V++K+FD+ + Sbjct: 1014 GTKQHEQEGLTSWPEQGIPERQEIKQAGIKVTAFPALVAQGDHVSLKMFDDQNTALETHR 1073 Query: 1068 NGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP 1127 G+ LL L + ++YL + LP+ + L F+P G+ L+DD ++ +DK+ Sbjct: 1074 KGVVTLLKLTLSKEMRYLQKNLPHLKESMLIFSPLGQKETLLDDLLNAVLDKVFLDGRAL 1133 Query: 1128 VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKA 1187 T+ F + K + +L D+A Q+ ++L++ + KR+KG + + DIK Sbjct: 1134 PRTKAEFESCLVKNKPQLVSVANDMAGQLYRVLSSYQGVAKRMKGSIPLPWTRIYGDIKV 1193 Query: 1188 QMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQW 1247 Q+ L+Y GF+ LG RY + IE RLE+ +++ + ++E + Q + + Sbjct: 1194 QLEQLIYPGFIGNTPLFWLGQLPRYFKGIEVRLERFQNHLNKENQYVSELEILWQTYSRQ 1253 Query: 1248 INKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 D ++ + RWM+EE R+S FAQ +GT PIS+KR+ + +++ Sbjct: 1254 KKAHDEKALYDPELIKYRWMLEEYRISLFAQSVGTLEPISEKRLNKQWQEV 1304 >UniRef50_Q2Y975 ATP-dependent helicase HrpA n=2 Tax=Proteobacteria RepID=Q2Y975_NITMU Length = 1329 Score = 1534 bits (3972), Expect = 0.0, Method: Composition-based stats. Identities = 580/1326 (43%), Positives = 802/1326 (60%), Gaps = 86/1326 (6%) Query: 54 IDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKI 113 ++ + R A P+ YP+ LPV +Q+I +AI+ +QVVI++GETGSGKTTQLPKI Sbjct: 7 VNAKSRNFEQRLANLPKPAYPEELPVVALRQEIAQAIQKNQVVIISGETGSGKTTQLPKI 66 Query: 114 CMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLM 173 C+ELG G+ +IGHTQPRR+AARTVA RIA ELK+ G +GYKVRFSD VS T VKLM Sbjct: 67 CLELGWGLHAMIGHTQPRRIAARTVAARIASELKSPLGHAVGYKVRFSDKVSPETYVKLM 126 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATID 233 TDGILLAE Q D L+ YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+I+TSATI+ Sbjct: 127 TDGILLAETQGDPNLLAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIVTSATIN 186 Query: 234 PERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEA-------------------------- 267 ERFS HF+NAP+IEVSGR YPVEVRYRPI A Sbjct: 187 SERFSAHFHNAPVIEVSGRMYPVEVRYRPIEAPARAASAIAEDRNEDKAGNKTRDKDKDR 246 Query: 268 --------DDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL------ 313 D E D QAI DAVDE+++ GD+L+F+ GEREIRDTA+AL K Sbjct: 247 QKDKHKDRDRDEGDIEQAILDAVDEINRCGPGDVLVFLPGEREIRDTAEALRKHAFGGPG 306 Query: 314 -NLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTAR 370 EILPL+AR S ++Q RVF+ RRIVLATNVAETSLTVPGI+YVID G AR Sbjct: 307 TGRAGAEILPLFARQSYADQERVFKPGGSSLRRIVLATNVAETSLTVPGIRYVIDTGVAR 366 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 I RYSYR KV++L +E IS+ASANQR GRCGRV GIC RLYSE D+L+RPEFTDPEILR Sbjct: 367 IKRYSYRNKVEQLQVEKISRASANQRAGRCGRVMSGICFRLYSEQDYLARPEFTDPEILR 426 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 ++LA+VIL+M +L +G I FPF+E P R I DG +LL ELGA+ LT +G Sbjct: 427 SSLAAVILRMKSLKIGSIENFPFLEPPLPRMIADGYQLLAELGAVDESN-----TLTSIG 481 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 +L++ P+DPR+ARM+L A++ C+ E +II SALS+QDPR+RP ++Q+A+D H+ F D Sbjct: 482 WRLARFPIDPRIARMILAAKEENCLTEMLIIASALSVQDPRDRPFERQEAADRAHQSFQD 541 Query: 551 KESDFLAFVNLWNYLGEQQKALSSN-AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 + SDFL ++ LW++ + K SN C+ ++L++ R+REW++++ QL +V E G Sbjct: 542 ERSDFLGYLKLWDFFDDLLKHKKSNRKLIEQCQENFLSHRRMREWREVHGQLHTLVVETG 601 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM 669 N PA Y EIH ALL GLL +IG + + EY G R +FSIFPGS L K PKW++ Sbjct: 602 FKPNKIPANYDEIHRALLAGLLGNIGFRIDEDNEYLGTRGIKFSIFPGSVLKKAKPKWIV 661 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPI 729 AEL ET+RL+GR A+IDP WVE + K+ Y +PHWE+ V A E+VT+YGL + Sbjct: 662 AAELTETTRLYGRGVAKIDPAWVERIGGKFCKKHYFDPHWEKKSAQVSAFERVTLYGLTV 721 Query: 730 VAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDIL 789 V R+V Y I+P RE+FIR ALV G++ T+ FF+ N +L A V LEHK+RR D+L Sbjct: 722 VPKRRVYYGNINPKEAREIFIRSALVAGEYITQAPFFKHNHELIANVAALEHKTRRPDVL 781 Query: 790 VDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYP 849 VD++ +F FYD I + + F+ W ++ RE LL K L++ A+ +++ +P Sbjct: 782 VDEQEIFVFYDGLIPEGISNGAAFEKWHREAERENSRLLYIPKEYLMRHTAQSVTEERFP 841 Query: 850 NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKS 909 + L L+Y+F+PG DGVT+ +PLPLLN+++ + F+ +PGL RE + +++ Sbjct: 842 DTMLVDGFPLSLTYRFDPGHVLDGVTITVPLPLLNKLDATQFDSLVPGLVREKITWYLRA 901 Query: 910 LPKPVRRNFVPAPNYAEAFLGRV---------KPLELPLLDSLERELRRMTGVTVDREDW 960 LPK +RR+ VP P + FL +P L ++L R +R TG+TV + W Sbjct: 902 LPKQIRRHVVPVPEFVTQFLESAEHAAATSPPEPSPSLLTETLARFIRTKTGLTVPPDAW 961 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV---ADDGIEQSGL 1017 ++ P HL + +++VDD ++L R L LK L Q T S + +E+ + Sbjct: 962 D-EKPPSHLMMNYKIVDDAGQELAMNRDLGQLKTQLGQAAQLTFSRSESGEHNPLERDDV 1020 Query: 1018 HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLN 1077 W FG LP+ R + +PAL + VAI+LFD + +M G+R+LL Sbjct: 1021 KHWDFGDLPQEITFTRAGKNMTGFPALAERDGKVAIRLFDTREAAELSMRGGVRQLLGFE 1080 Query: 1078 IPSPIKYLHEKLPNK----------AKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP 1127 + +K L + L + A+ + K +L +D ++ D+ A+ Sbjct: 1081 LKEQMKQLEKDLSGQGAKSGKGRYLAQAAFQLHTLIKPEQLKEDILNAVADRAFIADDAL 1140 Query: 1128 VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGL----- 1182 +E+ F A ++ R L + + V+ + + + R+ Sbjct: 1141 PRSEKEFVAQRQRARTRLPAVSEALVRIVQNVASESQVLMARISSIGGTGKVGVQKTGAA 1200 Query: 1183 ---------SDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 +D+ Q+ LVY GF++ ++RL RYL+ + RL+K +P RD Sbjct: 1201 SGGGSGNPGADLMIQLRNLVYPGFLSATPWERLQHLPRYLKGMILRLDKYDANPERDARH 1260 Query: 1234 MLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 + + ++Q + K AR +D + E RW IEELR+S FAQ+L TP P+S KR+ + Sbjct: 1261 AAAIAGLWNRYEQRLEKHRKARIDDPRLVEFRWQIEELRISLFAQELKTPSPVSAKRLQK 1320 Query: 1294 AMEQIS 1299 E+I+ Sbjct: 1321 LWEEIN 1326 >UniRef50_Q0F3B4 ATP-dependent helicase HrpA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3B4_9PROT Length = 1289 Score = 1528 bits (3958), Expect = 0.0, Method: Composition-based stats. Identities = 618/1293 (47%), Positives = 855/1293 (66%), Gaps = 9/1293 (0%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 L +L M+ +R + S+RLHG+++ ++ + EI ++ R A Sbjct: 2 IDELSGQLAECMIAERRKLSKRLHGLRRRLQQKKPVDRALAALTAEIAASSACHARRRQA 61 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P ++YP LPVS+K++ I AI HQVVI+AGETGSGKTTQ+PKIC+ELGRG+ GLIGH Sbjct: 62 CPAVSYPAELPVSEKRETIAAAIAKHQVVIIAGETGSGKTTQIPKICLELGRGMAGLIGH 121 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AAR+VA RIAEE+ + G +GYKVRFSDH + +KLMTDGILLAEIQ D L Sbjct: 122 TQPRRIAARSVATRIAEEMGSPIGEHVGYKVRFSDHTGTDAYIKLMTDGILLAEIQSDPL 181 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L+ YDTIIIDEAHERSLNIDFLLGYLK+LLP+R DLKIIITSATI+ RFS FN AP+I Sbjct: 182 LLAYDTIIIDEAHERSLNIDFLLGYLKQLLPKRRDLKIIITSATINTGRFSAFFNEAPVI 241 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDT 306 EVSGRT+PVE+RYRP+ + DD +RD QAI DAVDE + + GDILIF+ GEREIR Sbjct: 242 EVSGRTHPVEIRYRPLQGDDDDRDRDLPQAIMDAVDEAALIDRFGDILIFLPGEREIRAV 301 Query: 307 ADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDP 366 +AL++ + TE++PL +RLS +EQ+RVFQ H+GRRIVLATNVAETSLTVPGI++VID Sbjct: 302 TEALHQHKMTQTEVIPLLSRLSPAEQDRVFQKHTGRRIVLATNVAETSLTVPGIRFVIDS 361 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDP 426 G ARISRYS RTKVQRLPIEP+SQASANQR GRCGRV+ GICIRLYSE+ F +RPE TDP Sbjct: 362 GLARISRYSTRTKVQRLPIEPVSQASANQRAGRCGRVAAGICIRLYSEESFDNRPEQTDP 421 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI RTNLASVILQM+ LGLGD+AAFPF++AP+K I+DG LLEEL A+ + + L Sbjct: 422 EIRRTNLASVILQMSNLGLGDVAAFPFMDAPEKPAIRDGYLLLEELQAVDSKRE-----L 476 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T +G++L +LPVDPR+ RM+L+A + E +II SALS+QDPR RPMD QQ +DEKHR Sbjct: 477 TLIGKKLVRLPVDPRIGRMLLQADSERSLHEVLIIASALSVQDPRTRPMDMQQQADEKHR 536 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK 606 F D SDFL ++ LW++ EQ + LS + R+LC +L+Y+R+REW D+++QL VV+ Sbjct: 537 LFADPASDFLVWLKLWDWYHEQARHLSRSKLRKLCHDRFLSYIRLREWHDLHSQLLAVVR 596 Query: 607 ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPK 666 E+ + N +PA IH ALL GLLSH+G+ D K++Y GARN RFS+FPGS L KKPPK Sbjct: 597 EMKMTPNKQPATADAIHRALLAGLLSHVGLYDEKKKQYLGARNLRFSLFPGSALCKKPPK 656 Query: 667 WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYG 726 WV+ ELVETSRL+GR AA I+P W+E +A HL+ R+YSEPHW R + V A EK+++YG Sbjct: 657 WVICGELVETSRLFGRTAAVINPAWLEELAPHLVNRSYSEPHWSRKRAQVAAYEKLSLYG 716 Query: 727 LPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRR 786 +PI+A+R ++Y +DP + RELFIRHALV+ ++ T N +L +E+E LE K RRR Sbjct: 717 IPIIASRLIHYGPVDPVVARELFIRHALVQHEFHTHAKAILHNRRLISELERLEAKQRRR 776 Query: 787 DILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKL 846 D+L +++ +F+F+D I V + + F+ W + ++ P LL ++ L+ A +I Sbjct: 777 DLLAEEQVVFDFFDAIIPAHVFTGKLFEQWRLQAEKKQPKLLYLQQQELLHSDAAQIDAA 836 Query: 847 DYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIAL 906 +P+ + G LKL+ Y F+P ADG+T+ +PLP+L Q++ FEW +PG+ +E ++ L Sbjct: 837 AFPDTFIDGLLKLKYRYHFDPAHKADGITLLVPLPVLGQLDAERFEWLVPGMLQEKLLLL 896 Query: 907 IKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVP 966 IKSLPK +RR+FVPAP++A A + + L+D L REL RMTGVT DWH D +P Sbjct: 897 IKSLPKAMRRHFVPAPDFARAAAENMPFGQGRLIDMLARELGRMTGVTPHHTDWHSDNLP 956 Query: 967 DHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV-ADDGIEQSGLHIWSFGQL 1025 H+++ F ++D++ K+++ R L+ L+ G + +L AV A +E+SG+ W FG+L Sbjct: 957 AHMRMQFCLLDEQGKEVESSRDLRALQHKYAGHSRRSLQAVDAVQALERSGITRWDFGEL 1016 Query: 1026 PESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYL 1085 P R +++ +PAL D+ D V+I++F++ E GL RL +L++ ++ L Sbjct: 1017 PTVVSTLRRGMQLQLFPALQDDGDKVSIRVFESRHEADTITRKGLLRLFMLHLHQQVQML 1076 Query: 1086 HEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAEL 1145 + P ++ + + G L DD I+ P +E F E+ R+ + Sbjct: 1077 KKSTPQLQQMSMRYALIGDPSTLKDDLITAAFTAQFMHEPLP-RSESAFNQRLEQGRSRI 1135 Query: 1146 NDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKR 1205 ++A + LTA + L+ + + DI+ Q+ LV GF+ + Sbjct: 1136 VARAAELAGHITAALTAHTELITALENSRAAPLKPVVDDIREQIERLVSAGFIADTPAEW 1195 Query: 1206 LGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIR 1265 L R++QA RL K + +D+ + + + L + + + + R Sbjct: 1196 LAHYPRFIQAATIRLGKAGRNLKQDQLHREALSRLWSLYVARRADLEHQQADTSAIDDFR 1255 Query: 1266 WMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 W IEELRVS FAQ L T P+S K++ + + Sbjct: 1256 WQIEELRVSLFAQDLKTSIPVSLKKLESLWQTL 1288 >UniRef50_Q47AH6 ATP-dependent helicase HrpA n=7 Tax=Betaproteobacteria RepID=Q47AH6_DECAR Length = 1329 Score = 1522 bits (3940), Expect = 0.0, Method: Composition-based stats. Identities = 572/1308 (43%), Positives = 814/1308 (62%), Gaps = 39/1308 (2%) Query: 20 MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV 79 + D R S +++ + + QQ + ++A I+++ V R A P+ + +LPV Sbjct: 29 LTSDARRLSSLRAELRRS-SGEKQQKLQADLAALIERSRAAVQERRAKLPKPEFQTDLPV 87 Query: 80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA 139 ++++ DI E I ++QVVIV GETGSGKTTQLPKIC++LG G +GLIGHTQPRRLAAR+VA Sbjct: 88 NERRADIAELIANNQVVIVCGETGSGKTTQLPKICLDLGIGARGLIGHTQPRRLAARSVA 147 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 R+A+ELKT+ G +G K+RF D + + VKLMTDGILLAE Q D L Y+ IIIDEA Sbjct: 148 TRLAQELKTQVGAGVGVKIRFHDKSTSESWVKLMTDGILLAESQSDPYLNAYEAIIIDEA 207 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----NAPIIEVSGRTYP 255 HERSLNIDFLLGYLK+LLP+RPDLK+IITSATID ERFS+HF+ +AP+IEVSGR +P Sbjct: 208 HERSLNIDFLLGYLKQLLPKRPDLKLIITSATIDAERFSQHFSAHGKSAPVIEVSGRLFP 267 Query: 256 VEVRYRPIVE-EADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN 314 VEVRYRP+V+ + D ERD AI DA DELS+ GDIL+F+ GEREIR+ A+AL K Sbjct: 268 VEVRYRPVVDIDKKDDERDLYDAIVDAADELSRLGSGDILVFLPGEREIREAAEALRKHA 327 Query: 315 LRH--------TEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVID 365 L EILPL++RLS +Q+R+F+ G RRIVLATNVAETSLTVPGI+YVID Sbjct: 328 LARPGLSSAHAPEILPLFSRLSAGDQDRIFKPSGGQRRIVLATNVAETSLTVPGIRYVID 387 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G AR+ RYSYR KV++L +EPISQA+A QR GRCGRV+ G+C+RLY E DF +R FTD Sbjct: 388 TGLARVKRYSYRNKVEQLQVEPISQAAARQRAGRCGRVAAGVCVRLYDEADFNARAPFTD 447 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEILR++LA VIL+M +L L D+ +FPF+E P + I DG LL+ELG + D + Sbjct: 448 PEILRSSLAGVILRMKSLKLTDVESFPFIEPPPAKAISDGYALLQELGGLDDDN-----R 502 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT +G L++LP+DPR+ RM++ A+ GC++E +II + LS QDPRERP ++QQA+DEKH Sbjct: 503 LTKVGDALAKLPLDPRIGRMLVAARDLGCLKEVLIIAAGLSTQDPRERPQERQQAADEKH 562 Query: 546 RRFHDKESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 ++F D++S+FL++V LW + + S+ C +L+YLR+REW++++ QL + Sbjct: 563 KQFADEKSEFLSWVKLWGWFQNVVEHKKSNKQLIDNCHAHFLSYLRLREWREVHGQLHAM 622 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 V ELG N P + IH ALLTGLL +IG K + Y GAR R+ I P S L KK Sbjct: 623 VTELGWKENDLPGTFDAIHQALLTGLLGNIGCKSDESGYYLGARGIRYLIHPSSPLQKKA 682 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTV 724 KW+M AE+ ET+RL+GR ARI+ +W+E V HLIKR Y +PHWE+ V E+ T+ Sbjct: 683 GKWIMAAEITETTRLFGRCVARIEADWIEKVGAHLIKRQYFDPHWEKKSMQVAGWERTTL 742 Query: 725 YGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHA----FFRENLKLRAEVEELE 780 YG+ I R+++Y + PA RE+FIR LV + A FF+ N K ++E++E Sbjct: 743 YGIVINPKRRIHYGPLAPAEAREIFIRQGLVGEEIDESFAKCWPFFQHNQKQIRDIEKIE 802 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 HK RR+D+LVDDE +F FYD I + + FD W K +E P LL K L++ A Sbjct: 803 HKQRRQDVLVDDELIFGFYDHLIPEGIHNGATFDHWRKTAEQENPKLLFLSKDDLMRHSA 862 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 ++ +P+ G ++ L+Y FEPG+ DGVT+ +PL LNQ+ EW +PGL + Sbjct: 863 AGVTTEAFPHHIKVGGVEYGLTYHFEPGSPRDGVTLTLPLAQLNQIPVLRMEWLVPGLLK 922 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE--------LPLLDSL--ERELRRM 950 E ++ LIK+LP+ +R VP P + E F+ + PL+D + R L Sbjct: 923 EKLVQLIKTLPQKIRAKLVPVPEFVEEFIAATAGNDKKMNQGLIPPLIDYILEARGLNAR 982 Query: 951 TGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADD 1010 G V + + D +P H + ++++D+ ++L RSL L+ + +E + + + Sbjct: 983 -GWAVTPDAFRPDALPPHFSMNYKLIDEHGRQLDMNRSLLALRGEWGKEAKEEFADLHET 1041 Query: 1011 GIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGL 1070 E + L W+FG+LPE E G V +PAL DE ++V++K+FD+ E + GL Sbjct: 1042 PSEYTQLTDWTFGELPELMEVPVGKQTVIGYPALSDEGETVSLKVFDSAEEAAETHRKGL 1101 Query: 1071 RRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWT 1130 RL +L ++Y + +P ++G+ + P G EL + ++ P T Sbjct: 1102 ARLFMLQFKEQVRYFDKNVPGLTQMGMQYMPLGSTDELKRQLVDLSFERACLTEPLPT-T 1160 Query: 1131 EEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMG 1190 E F A + +A L + ++ + V +LT + K+L A ++DI+AQ+ Sbjct: 1161 PEAFKARCAEAKARLGLIMQEVCRMVGTVLTEWQAVTKKL--PAFKAHAAAVADIEAQLK 1218 Query: 1191 GLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINK 1250 L+ + FV F+RL RY++AI RL+KL +P RD M + + +++ + Sbjct: 1219 RLLGKNFVVDTPFERLQHYPRYMKAIVVRLDKLKANPARDAQLMAEYGPLWSNYERRAIQ 1278 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 L D V++ RW++EELRV +AQ+L TP P+S KR+ + E I Sbjct: 1279 LAKLGTLDPQVEQFRWLLEELRVGLYAQELRTPVPVSTKRLQKQWEGI 1326 >UniRef50_B5JXZ9 ATP-dependent helicase HrpA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXZ9_9GAMM Length = 1300 Score = 1521 bits (3938), Expect = 0.0, Method: Composition-based stats. Identities = 604/1303 (46%), Positives = 835/1303 (64%), Gaps = 28/1303 (2%) Query: 10 TALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARP 69 AL+ R+ M D+ RRL + + D +A+ +AK+ID +A + R P Sbjct: 9 AALKARIAEAMRGDQFHLHRRLKRL----DADNAEAVSA-LAKDIDTSAQRRQQRAETLP 63 Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 Y LP+ + DIL+AI +HQVV++ GETGSGKTTQLPK+C+ELGRG+ G IGHTQ Sbjct: 64 TPEYDAQLPIVAARADILKAIEEHQVVVLCGETGSGKTTQLPKLCLELGRGVAGYIGHTQ 123 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAAR+VA RIAEELKTE G +G+KVRF+D VS+ + +KLMTDGILLAE Q DR L Sbjct: 124 PRRLAARSVAARIAEELKTELGQGVGFKVRFADKVSELSHIKLMTDGILLAETQGDRFLE 183 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YDT+IIDEAHERSLNIDFLLGY+K +LPRRPDLK+IITSATIDPERFS+HFN+API+ V Sbjct: 184 RYDTLIIDEAHERSLNIDFLLGYIKRILPRRPDLKVIITSATIDPERFSKHFNDAPILNV 243 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQL--QAIFDAVDELSQESHGDILIFMSGEREIRDTA 307 SGRTYPVEV YRP+V+ D ER+ Q + D VDE Q GDIL+F+ GER+IRDT Sbjct: 244 SGRTYPVEVEYRPLVDLDSDDERETSLRQGVADCVDEAMQNGPGDILVFLPGERDIRDTQ 303 Query: 308 DALNK----LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 L K + +ILPLY RLSN+EQ R+F+S RRIVL+TNVAETS+TVPGI +V Sbjct: 304 RFLEKHFASRRGQSADILPLYGRLSNAEQQRIFKSSGPRRIVLSTNVAETSVTVPGIVFV 363 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 ID G AR+SRYSYR+KVQRLPIE ISQASANQRKGRCGRV+ GIC RLYSEDDF +RPEF Sbjct: 364 IDTGLARVSRYSYRSKVQRLPIEAISQASANQRKGRCGRVAPGICYRLYSEDDFNARPEF 423 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 TDPEILRTNLA VILQM +L LG+I FPF+EAPD R I DG +LL ELGA++ Q Sbjct: 424 TDPEILRTNLAEVILQMESLRLGEIEQFPFIEAPDSRLISDGYKLLFELGAMS--RQGKR 481 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +KLT LG+++S+LP+DPRLARM++ + + C+ E + + +ALSIQDPRERP D +QA+DE Sbjct: 482 HKLTSLGQKMSRLPIDPRLARMLMASDRENCLEETLTLVAALSIQDPRERPHDHRQAADE 541 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H+++ D+ SDF+A +NLW + E+ +ALS N R+ CR ++L+++R+REW+D QL Sbjct: 542 AHQQWRDERSDFIALLNLWRHFNERSRALSQNQLRKWCRENFLSWVRMREWRDTRRQLSD 601 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 K+L + NS Y E+H ALL+GLL +IG+K+ DK EY G RN RF +FPGSG+ +K Sbjct: 602 FAKQLKLKRNSIEPVYDELHRALLSGLLGNIGLKE-DKSEYLGPRNRRFHLFPGSGV-RK 659 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVT 723 +WVM AE+ ETSR++ A I PEW+E A HL+K+ EPH+ R G VMA E+ + Sbjct: 660 KVQWVMAAEIFETSRVFAHTVAEIKPEWLEQYASHLLKKRQFEPHFHRKSGQVMAYEQAS 719 Query: 724 VYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKS 783 +YGL I A ++VNYS+I+P R++F+R AL + Q+ F R N +L ++ ELE K Sbjct: 720 LYGLVIRARKRVNYSRINPVESRQIFVRDALADMQLQSEAPFMRHNRQLLEDIAELEAKG 779 Query: 784 RRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKI 843 RRRD+L+D++ F++QR+ DV A FD W KKV R+ P L + +++ + Sbjct: 780 RRRDLLLDEQPRIAFFEQRVPQDVGDAATFDRWRKKVERDDPYYLYLSERDCLRQADHAV 839 Query: 844 SKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELV 903 +P+ L L LSY FEPGAD+DG+T+HIP L QV+ W +PG + + Sbjct: 840 HTAQFPSELQFDELTLPLSYHFEPGADSDGITLHIPSAALKQVDAERCSWLVPGWLEDKI 899 Query: 904 IALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE--------LPLLDSLERELRRMTGVTV 955 ALIKSLPK R FVP P+ A + L +L L R GV + Sbjct: 900 AALIKSLPKAQRTRFVPVPDVASEARRELMRQNPQCGAGEVRSLSRALAAWLGRYAGVAL 959 Query: 956 DREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQS 1015 D ++ HL++ F V + K + +GR L L+ +L +++ +E+ Sbjct: 960 SPNDLAEAELEPHLRMRFEVRNADQKLIGQGRDLNALQASLAEHAEDSFYGGDFHDLERD 1019 Query: 1016 GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 G+ W FG+LP+ ++ ++K +PAL+D DSV+I+L D ++++ +GL RL Sbjct: 1020 GITRWDFGRLPDGVAFEQNGVQLKGYPALLDMGDSVSIRLLDTREDRQRQHRDGLARLFQ 1079 Query: 1076 LNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 L + IKYL +P+ KL L+F P G EL++D I ++ +G F Sbjct: 1080 LQLRDQIKYLKRHIPDIDKLALWFAPVGGKDELVEDIIYAVTQRVFLEHGELPSHPADFE 1139 Query: 1136 ALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYR 1195 + + ++E+ + +++Q+ +IL ++ +++ G + + DI Q+ L+Y Sbjct: 1140 SEVARGKSEMVEAAAALSQQLVEILGQAHSVRQKIGGELPLNWVEAAQDIDDQLEWLIYP 1199 Query: 1196 GFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR 1255 GF++ L RYL AI+ RLEKL P +DR + ++E + +Q ++L Sbjct: 1200 GFLSETPSDWLAQYPRYLAAIQFRLEKLDHAPDKDRLRRSEIEPLWARFQGLWDELEA-- 1257 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 E RW++EELRV+ +AQ L T S +R+ +A+ + Sbjct: 1258 ---PQAAEARWLVEELRVARYAQHLKTRLKTSPERVEKALNGL 1297 >UniRef50_A9WQ04 ATP-dependent helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WQ04_RENSM Length = 1296 Score = 1518 bits (3932), Expect = 0.0, Method: Composition-based stats. Identities = 705/1298 (54%), Positives = 892/1298 (68%), Gaps = 78/1298 (6%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL----- 124 ITYP LPVS ++++++ AIRDHQVVI+AGETGSGKTTQ+PK+C+ELG G Sbjct: 4 TITYPPELPVSARREELMAAIRDHQVVIIAGETGSGKTTQIPKMCLELGLTEPGKDGKPR 63 Query: 125 -IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 IGHTQPRRLAARTVA RIA EL + G +G++VRF+ VS T VK+MTDGILLAEIQ Sbjct: 64 LIGHTQPRRLAARTVAERIAAELDVKIGEEVGFQVRFTGEVSRQTKVKVMTDGILLAEIQ 123 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN- 242 +D+LL +Y T+IIDEAHERSLNIDF+LGYL+++LP+RPDLKIIITSATIDPERF++HF Sbjct: 124 RDKLLHRYSTLIIDEAHERSLNIDFILGYLRQILPKRPDLKIIITSATIDPERFAQHFAI 183 Query: 243 ---NAPIIEVSGRTYPVEVRYRPI---------VEEADDTERDQLQAIFDAVDELSQESH 290 API EVSGRTYPVE+RYRP+ E D ++D L A+ DAV+ELS E+ Sbjct: 184 DNVPAPIEEVSGRTYPVEIRYRPLDGSDGEPAEQSEDDSEDKDPLDAVCDAVEELSGEAP 243 Query: 291 GDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIV 345 GD+LIF SGEREIRD A+AL LR EILPL+ARLS +EQ+ VF S RRIV Sbjct: 244 GDVLIFFSGEREIRDAAEALRGRFAHHPRLREAEILPLFARLSLAEQHAVFSPGSRRRIV 303 Query: 346 LATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSE 405 LATNVAETSLTVPGIKYVID GTARISRYS+RTKVQRLPIE ISQASANQR GRCGRVS+ Sbjct: 304 LATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERISQASANQRAGRCGRVSD 363 Query: 406 GICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG----DIAAFPFVEAPDKRN 461 GICIRLYSE DF R EFTDPEILRTNLA+VILQM+A+G+ D+A+FPFVE PD + Sbjct: 364 GICIRLYSEADFQGRREFTDPEILRTNLAAVILQMSAIGVAREPKDVASFPFVEPPDAKA 423 Query: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 I DGV LL ELGA+ D ++P+GRQL+QLPVDPRL RM++E+ K GC RE MI+ Sbjct: 424 IADGVALLSELGALQPDG-----GISPVGRQLAQLPVDPRLGRMIVESGKRGCAREVMIL 478 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 +AL+IQDPRERP +K+Q +DEKH+RF D+ SDF F+NLW YL E+QK LSS AFRRLC Sbjct: 479 AAALTIQDPRERPTEKRQIADEKHKRFSDENSDFTGFLNLWRYLQEKQKELSSTAFRRLC 538 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMK 637 + +++NYLRVREWQD++ QLRQ+ K L I +++ + + +H +LL GLLSH+G+ Sbjct: 539 KAEFINYLRVREWQDLFAQLRQLAKPLNITLSTGEVDPVGLHIPVHQSLLAGLLSHLGLF 598 Query: 638 DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 D K+EY GAR +RF+IFPGS LFKK P WVM AELVETSRLW R+ ARIDP W E VA Sbjct: 599 DDRKREYAGARGSRFAIFPGSALFKKNPDWVMSAELVETSRLWARVNARIDPIWAEEVAA 658 Query: 698 HLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEG 757 L+KR+YSEPHW + G+VMA EKVT++G+PIVA R++NY +ID L RELFIRHALVEG Sbjct: 659 GLVKRSYSEPHWSKRNGSVMAYEKVTLFGVPIVAQRRINYGRIDAPLSRELFIRHALVEG 718 Query: 758 DWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWW 817 DW+T H FF N + AEVEELE + RRRD+ VDDETLFEFYD R+ +V+S RHFD WW Sbjct: 719 DWRTHHKFFHRNQSVLAEVEELETRMRRRDLRVDDETLFEFYDARVGAEVVSERHFDKWW 778 Query: 818 KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA-------- 869 K E P LL+F+ +++ E A+ + + YP G +L LSY+F+P + Sbjct: 779 KSARHENPTLLDFDPGVVMTEDAD-LDETAYPKSIRHGEFELALSYEFQPSSQYLAAGTP 837 Query: 870 --DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA 927 D+DGVTV +P+ LNQ+E++ F+WQIPGLR ELV ALIKSLPKPVR+NFVPAP+ Sbjct: 838 VNDSDGVTVTVPVLFLNQLEDAPFKWQIPGLRAELVTALIKSLPKPVRKNFVPAPDVGRQ 897 Query: 928 ----FLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKL 983 + P + L SLE LRR+ G + W+WD VP HL++TF+VVD K L Sbjct: 898 AATALAADLDPSQDDLESSLELALRRLRGHVIPPGSWNWDAVPVHLRMTFQVVDSAGKIL 957 Query: 984 KEGRSLQDLKDALKGKVQETLS------------------------AVADDGIEQSGLHI 1019 +G+ L L+++L G + ++ A E SGL Sbjct: 958 DKGKDLAALQESLAGATRRAIAESLGAMPKTAAPKNPAQRGPSAAVAAEPSIRELSGLTS 1017 Query: 1020 WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIP 1079 WS G + S + + V +PAL DE + +++F N E + G+ RLL L IP Sbjct: 1018 WSLGTIERSVSRLVNGHSVTGYPALTDEGTTAGLRVFQNEDEALVSHRAGVIRLLALRIP 1077 Query: 1080 SPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHE 1139 SP +Y+ E L N KL NP+GKV +LI DC +DKLI +TE F AL+E Sbjct: 1078 SPDRYVLEHLSNSEKLTFSQNPHGKVTDLIADCTLAAIDKLIPEE--LPFTEAEFDALYE 1135 Query: 1140 KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVT 1199 RAEL DTV + VE+IL + I +LKG + + L+D++AQ+ GLVY GF++ Sbjct: 1136 ASRAELIDTVFAVVAVVERILASARRIETQLKGSTSLALISALNDVRAQLDGLVYAGFIS 1195 Query: 1200 GNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDE 1259 G+ +L R+L AIEKRLEKL + RD M V+ ++ + + L R + Sbjct: 1196 RTGYAQLSQLPRFLVAIEKRLEKLPTNVQRDGLNMAAVQRLEDEYDDAVAALAAGRSVPQ 1255 Query: 1260 DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 ++++RWM+EELRVS FA +LGT Y +S+KRI QAM Q Sbjct: 1256 SLRKVRWMLEELRVSLFAVELGTAYSVSEKRIRQAMSQ 1293 >UniRef50_A4VNQ0 ATP-dependent helicase HrpA n=32 Tax=Proteobacteria RepID=A4VNQ0_PSEU5 Length = 1425 Score = 1514 bits (3920), Expect = 0.0, Method: Composition-based stats. Identities = 629/1362 (46%), Positives = 843/1362 (61%), Gaps = 81/1362 (5%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 L + LD + DR R R+LH ++K + +A + + +A KV R + Sbjct: 74 AIDTLLKNLDQALFADRHRLRRQLHELRKQPD----EARLAQWLERFQASAAKVEARRQS 129 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P I Y D+LP++ K+ +I A+ HQV+++AGETGSGKTTQLPKIC+E+GRG+ GLIGH Sbjct: 130 VPRIRYDDSLPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLIGH 189 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAAR+VA R+AEEL G +GY+VRF D ++ T++KLMTDGILLAE Q DR Sbjct: 190 TQPRRLAARSVATRVAEELGAPLGELVGYQVRFEDQSTERTLIKLMTDGILLAETQHDRF 249 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L +YDTII+DEAHERSLNIDFLLG+LK LLPRRPDLK+IITSATID ERFS HF+ API+ Sbjct: 250 LEKYDTIIVDEAHERSLNIDFLLGFLKTLLPRRPDLKVIITSATIDLERFSEHFDGAPIV 309 Query: 248 EVSGRTYPVEVRYRPIVEEADDT------ERDQLQAIFDAVDELSQES------HGDILI 295 EVSGRTYPVE YRP+ E D+ + Q I A+DE++ GD+L+ Sbjct: 310 EVSGRTYPVETWYRPLAAEIDEDGNRVEDDLTVDQGILAALDEIAAHERSVGQRPGDVLV 369 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 F+ GEREIRD A+ L K NL+ TE+LPLYARL+ +EQ ++FQ GR+IVLATNVAETSL Sbjct: 370 FLPGEREIRDAAEVLRKANLKFTEVLPLYARLTPAEQQKIFQPRPGRKIVLATNVAETSL 429 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI+YVID GTARISRYSYR KVQRLPIE +SQASANQRKGRCGRV GICIRLYSE+ Sbjct: 430 TVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYSEE 489 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DFL RP FTDPEILRTNLA+VILQM L LGDI FPF+E PD + I DG LL+EL A+ Sbjct: 490 DFLGRPAFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELSAV 549 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 + Q LTPLGRQL++LP+DPRL RM+LEA + G + E +I+ SALS+QD RERP Sbjct: 550 NRENQ-----LTPLGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDVRERPA 604 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 D+QQA+D+ H ++ D +SDF A +NLW EQ++AL SNA R CR ++LNYLR+REW+ Sbjct: 605 DRQQAADQAHAQWKDPDSDFAALINLWRGFEEQRQALGSNALRSWCRKNFLNYLRLREWR 664 Query: 596 DIYTQLRQVVKE--LGIPVNS--------------------------------------- 614 D + QL + +E LG P +S Sbjct: 665 DAHRQLTLIARELKLGAPADSRGQGRPQKGEARGSALDRGTTAAAPSAEAPAPTKDNKVN 724 Query: 615 --------------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 + Y +H A+L GLLS IG K + ++ GAR RF + PGS + Sbjct: 725 AIVRQQVEASEAAQKAKSYAAVHKAILAGLLSQIGNKTEEG-DFLGARQRRFWVHPGSSI 783 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 +K P W+M AELVET++L+ R+ A+I+P+W+EP+A HL+K+ + EPHWE+ +G V+A E Sbjct: 784 GRKKPNWLMAAELVETTKLFARMVAKIEPDWIEPLAGHLVKKNHFEPHWEKKRGQVVAYE 843 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +VT+YGL +V R V+Y IDP RELFIR LV G+ +R N +L ++ELE Sbjct: 844 QVTLYGLIVVGRRPVHYGPIDPPAARELFIREGLVRGEINSRARALTANRELLERMDELE 903 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 K+RRRDIL D+ETLF +YD R+ D+ F++W+K+ S++ P LL + ++ A Sbjct: 904 AKARRRDILADEETLFGYYDARLPADIYQTASFETWYKRESQKNPQLLIMREEDVLAREA 963 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 +++ YP+ G L+L L Y FEP DGVT+ +P PLL Q+ +W +PGL Sbjct: 964 SEVTASQYPDHLRIGELQLPLEYHFEPNHPRDGVTLRVPAPLLPQLRRERLDWLVPGLIE 1023 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 +AL++ LPK +R+NFVP P++ A L ++ E L ++L REL RMTG V E W Sbjct: 1024 AKAVALVRGLPKAIRKNFVPVPDFVGAALAKITFGEGALSEALGRELTRMTGARVPDEAW 1083 Query: 961 HWDQ--VPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 + +HLK+ VVD + K L EGR L +L Q L A EQ + Sbjct: 1084 AEAAAGLENHLKMNIEVVDARGKFLGEGRDLAELTARFAEASQAAL-APPQQKAEQKPVE 1142 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 F Q+ E + K + +PALV+E V F E + L+RLLL + Sbjct: 1143 AKGFAQVAEKAQAKMAGLSMTVYPALVEEAGVVKEGRFPTQAEAEWQHRRALQRLLLQQL 1202 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDK-LIDANGGPVWTEEGFAAL 1137 P KYL +LP +LGL + GKV L++D + +D ++D A+L Sbjct: 1203 AEPAKYLRNRLPGLTELGLLYRDMGKVDALVEDILLASLDSCILDGEAALPRDGAALASL 1262 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 E+ R + +A+ +IL + KR KG++D+ A+ L+DIKAQ+ LVY GF Sbjct: 1263 AERKRGDWTAHAERLARLTLEILKHWHGLQKRFKGKIDLAQAVALNDIKAQLAHLVYPGF 1322 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 V + L + RYL+A+E+R +K+ RDR ++ + +Q +NK + Sbjct: 1323 VRETPAEWLKEYPRYLKAVEQRFDKIGAQLQRDRVWSGELGGYWEQYQARLNKHQQEGKR 1382 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 D + RWM+EE RVS +AQQLGT P+SDKR+ + Q+ Sbjct: 1383 DPQLALYRWMLEEYRVSLWAQQLGTKVPVSDKRLNKQWSQVE 1424 >UniRef50_A3YEF6 ATP-dependent helicase HrpA n=1 Tax=Marinomonas sp. MED121 RepID=A3YEF6_9GAMM Length = 1328 Score = 1510 bits (3910), Expect = 0.0, Method: Composition-based stats. Identities = 588/1333 (44%), Positives = 842/1333 (63%), Gaps = 63/1333 (4%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQA-IFQEMAKEIDQAAGKVLLREAARPEITYP 74 + +M +DR R++ +++ + ++ A + +E+ I + KV R PEI Y Sbjct: 1 MQDVMSKDRYHIERKVQLIERQQKSNSLDANLVEEVKAMILASQEKVRERSELVPEIKYD 60 Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 +LPV+ K + I+ +I+ +QVVIVAGETGSGKTTQLPK+C++ G G+ G+IGHTQPRRLA Sbjct: 61 QSLPVAAKAEYIIASIKANQVVIVAGETGSGKTTQLPKMCLQAGLGVAGMIGHTQPRRLA 120 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 AR+VA+RI++EL E G +G++VRF+D SD T+VKLMTDGILLAEIQQD+ L +Y I Sbjct: 121 ARSVADRISDELGVELGDEVGFQVRFNDESSDKTLVKLMTDGILLAEIQQDKFLQKYQAI 180 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 IIDEAHERSLNIDFLLGYLK +LP RPDLKII+TSATID RFS+HFN+AP+ EVSGRT+ Sbjct: 181 IIDEAHERSLNIDFLLGYLKRILPSRPDLKIIVTSATIDVARFSKHFNDAPVFEVSGRTF 240 Query: 255 PVEVRYRPIVEEADDTERDQ----LQAIFDAVDELSQESH-------GDILIFMSGEREI 303 PVE+RY+P++ ++D E D Q I DAV + E DIL+F+ GEREI Sbjct: 241 PVEIRYQPLLLKSDSEEVDADQSMEQGIVDAVHTIIHEEKLSSFRGASDILVFLPGEREI 300 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 R+TA+ L + LRHTE++PLYARLS+SEQ ++F+SHSGRRIVL+TNVAETSLTVPGI+YV Sbjct: 301 RETAELLRREELRHTEVVPLYARLSSSEQQKIFKSHSGRRIVLSTNVAETSLTVPGIRYV 360 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 IDPG ARISRYS R+KVQ+LPIE ISQASANQR GRCGRV++GICIRLY E D+ +R EF Sbjct: 361 IDPGVARISRYSVRSKVQQLPIEKISQASANQRAGRCGRVADGICIRLYDEADYQARAEF 420 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 TDPEI RTNLASVILQM L LG + F FVE PDKR I DG R L ELGAI + Sbjct: 421 TDPEIFRTNLASVILQMANLRLGAVEKFSFVEMPDKRLINDGYRALNELGAINKE----- 475 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +LTP+GRQL++LP+DP+L RM++ A K G + E II SAL+IQDPRERP +K+ SD+ Sbjct: 476 -RLTPIGRQLAKLPIDPKLGRMIIAADKLGVLNEIAIIVSALTIQDPRERPQEKKTQSDQ 534 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H D +SDF+ +NLW+ EQ++ALS N R+ CR +LNY+R+REW+DI+ Q+ Sbjct: 535 AHAVDKDADSDFVVLLNLWHRFEEQRQALSQNHLRQFCRKQFLNYMRMREWRDIHRQILI 594 Query: 604 VVKELGI---------------------------------------PVNSEPA-EYREIH 623 K+LG P +S+P+ +Y +H Sbjct: 595 SCKQLGFKESQSKPQENENKKQAIQSQKHKANHVSAKSNVSEALEEPASSKPSVDYERVH 654 Query: 624 IALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRI 683 ALL GL + I K + +E+ R+ + IFPGS LFKKPP+WVM AE+VET++L+GR+ Sbjct: 655 RALLAGLFTQIANKLDETKEFVACRSRKMHIFPGSVLFKKPPQWVMSAEMVETTKLYGRV 714 Query: 684 AARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPA 743 +A+++P WVE A+ +KR Y +PHWE+ QG VMA E+V++YGL +VA R+V+YS+++P Sbjct: 715 SAKMEPLWVEEYAKPFVKRQYFDPHWEKKQGRVMAYEQVSLYGLILVAKRRVDYSRVNPD 774 Query: 744 LCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRI 803 RE+FIR ALVEG+ +TRHAFF++N L +EE E K R RDILVDDE +F FY ++I Sbjct: 775 EAREVFIRSALVEGEMRTRHAFFQQNQDLIKTIEEDEAKLRTRDILVDDEVVFAFYQKQI 834 Query: 804 SHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSY 863 ++ + + + W K + L + L+K+ + I +P + + L + Y Sbjct: 835 PDEICNQKSLEFWLKS----NQEALTLTRKDLVKQEVD-IDNTAFPTSFGLNGVNLPIEY 889 Query: 864 QFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPN 923 QFEPG DG T+ +P+ LL Q+ W +PG +E A +++LPK +RR FVP P Sbjct: 890 QFEPGKAVDGATLKVPVGLLRQLSADELSWAVPGYIKEKCEAYLRALPKALRRRFVPIPQ 949 Query: 924 YAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKL 983 + + + + LL+ L +++R T + + +W +++ +L + V+ D+ K + Sbjct: 950 FVDRIYPNLSSTKGDLLEQLSLQIKRETLIDIPLTEWQGEKLEAYLNLNIEVISDQGKII 1009 Query: 984 KEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPA 1043 G++L +L+ +V E+ + E+ GL W +PE + KV A+PA Sbjct: 1010 GTGKALDELQTKFAAQVDESFAKFGTKAHEEKGLTNWPDQDVPEQQTLSQAGIKVTAFPA 1069 Query: 1044 LVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 LV ++V++K+FD+ + G+ LL +++ +KYL + LP + L F P G Sbjct: 1070 LVSNDETVSVKMFDDKATALETHRKGVIALLRISLSKDMKYLEKNLPKLRESLLIFAPIG 1129 Query: 1104 KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 K L+DD ++ +DK+ T E F K + +L ++A Q+ Q+L++ Sbjct: 1130 KKELLLDDLLNAVLDKVFVDGQTLPRTREEFDQTLLKNKPQLVTLANEMALQLHQVLSSY 1189 Query: 1164 FNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 + K++KG + + D+K Q+G L+Y GF+ LG RY + IE RL++ Sbjct: 1190 QKVAKQMKGNIPLPWTRVYGDLKQQLGNLIYPGFIGDTPLFWLGQLPRYFKGIEVRLDRF 1249 Query: 1224 AVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTP 1283 +++ A + E + Q++ + D ++ + RW++EE RVS FAQ +GT Sbjct: 1250 QNHLNKENALVTHCEQLWQSYAKQKQGHDAKNVYDPELLKYRWLMEEYRVSLFAQNVGTL 1309 Query: 1284 YPISDKRILQAME 1296 P+S+KR+ + + Sbjct: 1310 EPVSEKRLQKQWQ 1322 >UniRef50_D1VDH3 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. EuI1c RepID=D1VDH3_9ACTO Length = 1548 Score = 1509 bits (3908), Expect = 0.0, Method: Composition-based stats. Identities = 753/1434 (52%), Positives = 971/1434 (67%), Gaps = 136/1434 (9%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++ L RL +LMLRD R +RRL V+ + +++ + E++ A + Sbjct: 115 LGAAERTELAGLSARLPALMLRDGHRLARRLDAVRHDPDAESRARTIPAITDEVETAEIR 174 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V LR A P + YP LPVSQ+K +IL AIRD+QVVIVAGETGSGKTTQ+PKIC+ELGRG Sbjct: 175 VALRRDAVPALKYPAELPVSQRKDEILAAIRDNQVVIVAGETGSGKTTQIPKICLELGRG 234 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELK-TEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 + GLIGHTQPRRLAARTVA+RIAEE GG IGY+VRF+D V D+T+VKLMTDGILL Sbjct: 235 VTGLIGHTQPRRLAARTVADRIAEETGAGSLGGIIGYQVRFTDQVGDDTLVKLMTDGILL 294 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 AE+ DRLL QYDT+IIDEAHERSLNIDF+LGYL+ +LPRRPDLK++ITSATI+ ERFSR Sbjct: 295 AELGTDRLLRQYDTLIIDEAHERSLNIDFILGYLRRILPRRPDLKVVITSATIETERFSR 354 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD---QLQAIFDAVDELSQESHGDILIF 296 HF +APIIEVSGRTYPVEVRYRP+V+ D + AI DAVDELS E GD+L+F Sbjct: 355 HFGDAPIIEVSGRTYPVEVRYRPVVDPDDPEADPDRDVITAICDAVDELSAEGLGDVLVF 414 Query: 297 MSGEREIRDTADALNKLNLRHT---EILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 +SGEREIRDTADAL + + EILPLYARLS +EQ+RVFQ H GRRIVLATNVAET Sbjct: 415 LSGEREIRDTADALARRPSKELLPREILPLYARLSTAEQHRVFQPHPGRRIVLATNVAET 474 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLTVPGIKYV+D GTAR+SRYS+R KVQRLPIEP+SQASANQR GRCGR S+GIC+RLY+ Sbjct: 475 SLTVPGIKYVVDAGTARVSRYSHRLKVQRLPIEPVSQASANQRAGRCGRTSDGICVRLYA 534 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 EDDF +RPE+TDPEILRTNLASVIL M +LGLG++A +PF++ PD R + DG+ LL ELG Sbjct: 535 EDDFDARPEYTDPEILRTNLASVILSMASLGLGEVADYPFLDPPDPRQVTDGLALLHELG 594 Query: 474 AITT------------------------------------DEQASAYKLTPLGRQLSQLP 497 A + +LTPLGR+L++LP Sbjct: 595 AFEAVRPSRASAPVAPVTPAAPAGPAAPAGSAGSVDPAERAGEGRTPRLTPLGRRLARLP 654 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 +DPRLARM+L A + G + E +IIT+AL++ D RERP D QQA+ EKH RF + SDFL Sbjct: 655 IDPRLARMILAADEQGALAEVLIITAALAVGDVRERPADAQQAATEKHARFTEPTSDFLG 714 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA 617 ++NLWNYL E+ LSSN FRRLCR +YL+YLRVREWQD+++QLRQ + LG+ NS PA Sbjct: 715 YLNLWNYLREKAAELSSNQFRRLCRAEYLHYLRVREWQDVHSQLRQAARSLGLSTNSAPA 774 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 +++H ALLTGLLSHIG+ D +K++Y GAR ARF++FPGS LFKKPP+WV+ AELVETS Sbjct: 775 SPQQVHSALLTGLLSHIGLFDPEKRDYAGARGARFAVFPGSALFKKPPRWVVAAELVETS 834 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNY 737 RLWGR+AA+I+PEWVEP+A HLI+R+YSEPHW R AV+ATEKVT+YG+PIVAAR VNY Sbjct: 835 RLWGRVAAKIEPEWVEPLAGHLIRRSYSEPHWSRRSAAVLATEKVTLYGVPIVAARSVNY 894 Query: 738 SQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 S IDPALCRELFIRHALVEGDW+T+HAFF EN +L ++ +LEH++RRRDI+VDD+T+F+ Sbjct: 895 SGIDPALCRELFIRHALVEGDWETKHAFFAENSRLLSDAADLEHRARRRDIVVDDQTIFD 954 Query: 798 FYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFW---HQ 854 FYD RI DV+S RHFD+WWKK TP LL F+ +ML+ E A+ + D+P+ W Sbjct: 955 FYDARIPVDVVSGRHFDAWWKKTRPRTPGLLTFDPAMLVSETAKGVRADDFPDSWPAGRD 1014 Query: 855 GNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV 914 G ++ L+YQFEPG+ ADGVT HIPL +LNQVE GF WQ+PGLR +LV LI+SLPK + Sbjct: 1015 GEHRVSLTYQFEPGSAADGVTAHIPLAILNQVEPDGFTWQVPGLREDLVTELIRSLPKAL 1074 Query: 915 RRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRM-TGVTVDREDWHWDQVPDHLKITF 973 RR++VPAPNYA A LGRV P + PLL LEREL R+ G TV R D D++P HL+ITF Sbjct: 1075 RRSYVPAPNYARAVLGRVGPADGPLLAVLERELNRIGGGTTVSRADLDLDRLPPHLRITF 1134 Query: 974 RVVD--------------------DKN------------KKLKEGRSLQDLKDALKGKVQ 1001 RV D D + L EG+ L +LK L K+ Sbjct: 1135 RVYDGTGGRRTGGGQADDDGQAGRDGGGDRRQKSAESARRTLAEGKDLDELKRTLAPKLT 1194 Query: 1002 ETLSAVADDGIEQSGLHIW-SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 +SA A +E++GL W G +P + E++ G ++V+ +PALV E VA+++ Sbjct: 1195 AAVSA-AGGNLERTGLTGWGDLGTIPRTVERRAGRHQVRGFPALVAEPGGVALRVLATEA 1253 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 + +A G R LLL ++ SPI+Y++ +L N KL L +P+ V L+DD I+ D L Sbjct: 1254 DAARAHPLGTRALLLASVASPIRYINTQLSNATKLALRHHPHDSVGALLDDAIAAAADAL 1313 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL---------- 1170 I GGPVW E GF L ++VRAEL + + + + E++LT ++ R+ Sbjct: 1314 IAEAGGPVWDEAGFERLRDEVRAELPERSLAVVRAAERVLTLAHDVETRIDALTGRPTAG 1373 Query: 1171 ------------------------------------------KGRVDMTMALGLS--DIK 1186 +G +++ AL S D++ Sbjct: 1374 RASARPVQLTDLRSLGSAFAAAQGGKAQGGKAQSAKAQNGRAQGAANLSPALTASIEDLR 1433 Query: 1187 AQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQ 1246 Q+ L+Y GF+ G G RL D RYL +RL++L D ++ ++ KV V+ A+ + Sbjct: 1434 RQLAELIYPGFLAGAGADRLDDLARYLTGALRRLDRLPADATAEQPKLAKVTRVRTAYDE 1493 Query: 1247 WINK-LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 LPP D+ +RWMIEELR+S FAQ L TPYP+S++R+ ++M++++ Sbjct: 1494 LAADLLPPGTAPGPDLTRLRWMIEELRISLFAQTLRTPYPVSEERLYRSMDELA 1547 >UniRef50_Q1QXI6 ATP-dependent helicase HrpA n=17 Tax=Gammaproteobacteria RepID=Q1QXI6_CHRSD Length = 1325 Score = 1507 bits (3903), Expect = 0.0, Method: Composition-based stats. Identities = 654/1327 (49%), Positives = 877/1327 (66%), Gaps = 36/1327 (2%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVK-KVKNPDAQQAIFQEMAKEIDQAAGK 60 T + L+ +LD +LRD RRL + + ++ +++ + ++ + Sbjct: 6 TSDSRDQLARLRAQLDDCLLRDAHEQGRRLAKLNGRARSGKPIDRSLRDIEARLARSREQ 65 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 + R A + YPD+LPV ++++D+L A+ HQVV+VAGETGSGKTTQLPK+C+ELG G Sbjct: 66 LAARRAQPLTLRYPDDLPVVERREDLLAALDAHQVVVVAGETGSGKTTQLPKLCLELGLG 125 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 +GLIGHTQPRRLAARTVA R+AEEL G +GY+VRF+D + T+VKLMTDGILLA Sbjct: 126 RRGLIGHTQPRRLAARTVATRLAEELDVPLGAQVGYQVRFTDQTDERTLVKLMTDGILLA 185 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E Q D LM+Y+ IIIDEAHERSLNIDFLLGYLK L RRPDLKIIITSATID ERFS H Sbjct: 186 ETQNDPDLMRYEAIIIDEAHERSLNIDFLLGYLKRLTERRPDLKIIITSATIDVERFSHH 245 Query: 241 FN----NAPIIEVSGRTYPVEVRYRPIVEEADDTE-RDQLQAIFDAVDELSQ-------- 287 F AP++EVSGRTYPV+V YRP+V +ADD E R + I AV+E+ Sbjct: 246 FGRDGKPAPVVEVSGRTYPVDVFYRPLVRDADDEEDRTLQEGILHAVEEVETIERERRWY 305 Query: 288 ESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 D+LIF+ GEREIR+TAD L + +L+ TEILPLYARLSN+EQNRVFQ H+GRRIVLA Sbjct: 306 SGPRDVLIFLPGEREIRETADTLRRADLKGTEILPLYARLSNAEQNRVFQPHAGRRIVLA 365 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPGI+YVIDPG R+SRYSYR KVQRLPIEPISQASA+QRKGRCGR+SEG+ Sbjct: 366 TNVAETSLTVPGIRYVIDPGLVRMSRYSYRAKVQRLPIEPISQASADQRKGRCGRISEGV 425 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLYSE+DFL+RP +T+PEI RTNLASVIL M AL LGDI AFPFV+ PD R I+DG R Sbjct: 426 CIRLYSEEDFLARPTYTEPEIQRTNLASVILSMLALKLGDIEAFPFVDVPDSRFIKDGYR 485 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL ELGA+ D +L+ LGR++++LP+DPRLARM L + G +RE +I+ SALS Sbjct: 486 LLYELGAVGADN-----RLSELGRRVARLPIDPRLARMALAGAEQGSLRETLIVVSALST 540 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 QDPR+RP DK+QA+DEKHR++ D ESDF+A++NLW+ + + ++ LS N RR CR +YL+ Sbjct: 541 QDPRDRPADKRQAADEKHRQWQDPESDFMAWLNLWHGVEQARETLSGNQLRRWCRDNYLS 600 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNSEP--------------AEYREIHIALLTGLLSH 633 YLR+REW D + QL+Q+ +++G+ +S + +H ALL+GLLSH Sbjct: 601 YLRLREWHDTFRQLKQLTRDMGLEPSSAVLPPKEDDAASARPRVDGERLHKALLSGLLSH 660 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 +G ++ EY GA N +F I PGSGL KK PKWVM ELVETSRL+ R ARI P WVE Sbjct: 661 LGTLQENR-EYLGAHNRKFMIHPGSGLAKKTPKWVMAGELVETSRLYARDVARIQPAWVE 719 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 P+A HL+KR+YSEPHWE +G V+A E+VT++GLPIV R+++Y+++ P RELFIR A Sbjct: 720 PMASHLVKRSYSEPHWEMKRGQVVAFEQVTLFGLPIVTGRRIDYAKVAPEEARELFIRRA 779 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 LVEG+++T+ AFF+ N L +VEELE + R+RDILVD+ETLF FYD R+ DV AR F Sbjct: 780 LVEGEYRTQAAFFQHNRALIDDVEELEDRVRKRDILVDEETLFAFYDARLPADVAGARSF 839 Query: 814 DSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADG 873 + W K+ RE P++L E++ L+ AE++++ YP+ ++ L Y F PG DG Sbjct: 840 ERWRKQAEREAPEVLKLERATLMARDAEEVTQQAYPDELVHNGVRYPLDYHFAPGESDDG 899 Query: 874 VTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK 933 VT+ +P +L+Q+ E EW +PGL RE IAL+K+LPK +RR VP P++ +A L + Sbjct: 900 VTLTVPAAMLSQLPEGRLEWLVPGLLREKCIALLKTLPKAIRRQVVPIPDWVDAALATLV 959 Query: 934 PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 P E PL ++L LRR TGV + +DW DQ+ HL + RVV + L EGR L LK Sbjct: 960 PDERPLTEALGEFLRRRTGVRLSADDWRTDQLEPHLIMNLRVVAHDGEVLGEGRDLGALK 1019 Query: 994 DALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAI 1053 + A+A G L +PES ++ +V+A+PALVD DS+AI Sbjct: 1020 QRFDEAASQGARALAASGPTAEALAELPEQAIPESRSTQQAGIRVEAYPALVDRGDSLAI 1079 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCI 1113 + FD+P + A +G++R +L +P ++YL +L + L F G +L+DD + Sbjct: 1080 ESFDHPDKAHAAHRHGVKRAAMLRLPEQVRYLSRELKGLDRCALLFAKVGSKTQLVDDLV 1139 Query: 1114 SCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGR 1173 +++ + P + A E R+EL + +++ L + K LKG Sbjct: 1140 EAVFLQVVAVDPLP-RDRQSLEARIEATRSELVAHAEERVATLQKALEGHLEVTKALKGN 1198 Query: 1174 VDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 +++++AL SD+KAQM LVY GFV+ + L RY+QA RLEK + RD+ Sbjct: 1199 LNLSLALVYSDLKAQMARLVYPGFVSDAE-EWLEQYPRYMQAALIRLEKAPRERSRDQMA 1257 Query: 1234 MLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 M +V ++ + + R D E W +EELRVS FAQQLGT P+S KR+ + Sbjct: 1258 MQQVHAFEERLRARLEADQREGRRDPRFVEFGWWLEELRVSLFAQQLGTLAPVSAKRLER 1317 Query: 1294 AMEQISG 1300 +++G Sbjct: 1318 RWTELTG 1324 >UniRef50_B0RGP0 ATP-dependent helicase n=3 Tax=Actinobacteria (class) RepID=B0RGP0_CLAMS Length = 1272 Score = 1504 bits (3894), Expect = 0.0, Method: Composition-based stats. Identities = 662/1271 (52%), Positives = 887/1271 (69%), Gaps = 49/1271 (3%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 I YP LPVS+ + +I +AIRD+QVVIVAG TGSGKTTQLPKIC+ELGR IGHTQP Sbjct: 5 IVYPPELPVSRMRDEIADAIRDNQVVIVAGATGSGKTTQLPKICLELGRES---IGHTQP 61 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAART++ RIAEEL E G +GY+VRF+D VS +T +KLMTDGILL E+Q+DRLL + Sbjct: 62 RRLAARTISERIAEELGGEVGQLVGYQVRFTDKVSADTRIKLMTDGILLNELQRDRLLKK 121 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATIDP+ FS+HF +API+EVS Sbjct: 122 YDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIITSATIDPQSFSKHFGDAPIVEVS 181 Query: 251 GRTYPVEVRYRPIVEEA----------------DDTERDQLQAIFDAVDELSQESHGDIL 294 GRTYPVE+RYRP+V EA +RD L+ I A+DEL+ ES GD+L Sbjct: 182 GRTYPVEIRYRPLVAEAAVAGEDDDLADAPLERPADDRDFLEGINAALDELAAESSGDVL 241 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS----GRRIVLATNV 350 +F+SGE EIRD DA+ NL HTE+LPLY RLS+++Q+RVFQ + RRIVLATNV Sbjct: 242 VFLSGENEIRDAEDAIRSRNLPHTEVLPLYGRLSSADQHRVFQPSTQAGVRRRIVLATNV 301 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGIKYVID GTARISRYS R+KVQRLPIE ISQASANQR GR GR S+GI IR Sbjct: 302 AETSLTVPGIKYVIDAGTARISRYSVRSKVQRLPIEAISQASANQRSGRSGRTSDGIAIR 361 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYSE+DFL RPEFT+PEILRTNLA+VILQM +LGLGDIAAFPF++ PD R I+DGV LL Sbjct: 362 LYSEEDFLRRPEFTEPEILRTNLAAVILQMVSLGLGDIAAFPFLQPPDSRGIKDGVDLLT 421 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 ELGA+ + LT +GR LS+LP+DPR ARMV+E++KHG RE MII + L+IQD Sbjct: 422 ELGAVIRSPDGTP-ALTQVGRDLSRLPIDPRFARMVVESRKHGVSREVMIIVAGLTIQDV 480 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP++K+ +D++H RF D SDF+ +NLWN+L E++ LSS+AFRR+C+ ++LNY+R Sbjct: 481 RERPLEKRPQADQQHARFVDPSSDFITLLNLWNHLEEKEAELSSSAFRRMCKAEFLNYVR 540 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 VREW+D++ QLRQ+ + L + +N A+ IH +LL GLLSHIG+KDA K++Y GAR + Sbjct: 541 VREWKDVFRQLRQLARPLDLAMNEPKADPDGIHKSLLAGLLSHIGLKDAQKKDYVGARQS 600 Query: 651 RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWE 710 RF +FPGS L KK P +M AELVETSRL+ R A IDP W EP+A L+KRT+SEPHWE Sbjct: 601 RFVVFPGSALAKKQPDAIMSAELVETSRLFARTNAAIDPAWAEPIAGGLVKRTHSEPHWE 660 Query: 711 RAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENL 770 + QGA +A E+VT+YG+PIV R+V +S+IDPA RELFIRHALVEGDW+++ AF R N Sbjct: 661 KKQGATVAWERVTLYGVPIVLKRRVQFSRIDPAYARELFIRHALVEGDWESQQAFDRANR 720 Query: 771 KLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNF 830 +LR E+ E+E ++RRRDIL DDE +FEFYD+RI DV S R F+ WWKK +ETP+LL Sbjct: 721 RLREELAEVEERTRRRDILNDDEAVFEFYDKRIPRDVASTRAFEGWWKKQRQETPELLTM 780 Query: 831 EKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESG 890 L+ A + + +P W QG+ +L L+Y+FEPGA DGVTV +PL LL ++ +G Sbjct: 781 TAEELVASDAMDVDEAAFPPTWQQGDQRLSLTYRFEPGAPDDGVTVQVPLALLARLSPAG 840 Query: 891 FEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL----PLLDSLERE 946 F+WQ+PG+RR+LV A+IK+LPK +R+N VPA ++A+ L + + ++ Sbjct: 841 FDWQVPGMRRDLVTAMIKALPKALRKNVVPAADWADRLLEGLPEPDPQHPVAFTTTIAGL 900 Query: 947 LRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSA 1006 + R V V +D+ D++P HL++ FRVVD++ +++ GR L +L+ L + +++++ Sbjct: 901 IMRKAHVRVADDDFDLDRIPAHLRMAFRVVDERGREVAAGRDLTELQARLSSRARDSVAR 960 Query: 1007 V--------------ADDGIEQSGLHIWSFGQLPESYEQKRGN-----YKVKAWPALVDE 1047 A G+E++GL W +LP + +G + ++A+PALVDE Sbjct: 961 ATARPVERVAGAKGPATRGMERTGLTTWDLDELPRFVDTAQGGTGDSRHVIRAYPALVDE 1020 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 +VAI+L +Q +AM G+RRLL+L I +P Y+ + L ++ KL L +PY V Sbjct: 1021 GSTVAIRLMATAEDQARAMPGGVRRLLVLAIANPSAYVKQHLTSQEKLMLATSPYPNVQA 1080 Query: 1108 LIDDCISCGVDKLID--ANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 L DDC+ +D++++ A GG ++++E F ++V + D++ D V +ILT + Sbjct: 1081 LFDDCLLACIDQVLERVAPGGAIYSKELFETARDRVSGVVMDSMFDTVALVNRILTGARD 1140 Query: 1166 INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV 1225 + +K M + L+D + Q+ GLV+ GFV+ G RL YL + R+++L Sbjct: 1141 AERAIKQATSMQLIGALTDAREQLAGLVHPGFVSATGLARLQRLPAYLSGLTHRVQRLPD 1200 Query: 1226 DPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYP 1285 P RDRA M +V+ +++ +P A + RWM+EELR+S FAQ L T P Sbjct: 1201 QPARDRAWMTEVQKATDLYREAGGVIPSAPHAPASLVHARWMLEELRLSLFAQHLPTAEP 1260 Query: 1286 ISDKRILQAME 1296 +S +RI + + Sbjct: 1261 VSLQRIRKVLA 1271 >UniRef50_C5BR02 ATP-dependent helicase HrpA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR02_TERTT Length = 1353 Score = 1503 bits (3892), Expect = 0.0, Method: Composition-based stats. Identities = 607/1344 (45%), Positives = 842/1344 (62%), Gaps = 64/1344 (4%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKKVKN-PDAQQAIFQEMAKEIDQAAGKVLLREAA 67 ++ + D+L + D+ R + ++K + + +D A ++ R Sbjct: 14 LAHVRTQFDALCVDDKHRLQGLVRHIEKRLSLQKPCDRDLDRLTDRLDAALARIAERTRN 73 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P ++ D LP+S K+ +I I +QVVI+AGETGSGKTTQLPKIC+ELGRG++G+IGH Sbjct: 74 APTPSFDDALPISAKRDEIKSLIEANQVVILAGETGSGKTTQLPKICLELGRGLRGMIGH 133 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AARTVA+RIA+EL+ + G +GY+VRF+DH + T +KLMTDGILLAEIQQD L Sbjct: 134 TQPRRIAARTVASRIADELQVQLGSEVGYQVRFTDHSNSATHIKLMTDGILLAEIQQDPL 193 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN---- 243 L +YDT+IIDEAHERSLNIDFLLGYLK +L +RPDLK+I+TSATID ++F+ HF++ Sbjct: 194 LYKYDTLIIDEAHERSLNIDFLLGYLKGVLKQRPDLKLIVTSATIDLQKFAAHFSDQDGK 253 Query: 244 -APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS---QESHGDILIFMSG 299 AP+IEVSGRTYPVE YRP DD +D +AI A++E+ +S GDIL+F+SG Sbjct: 254 PAPVIEVSGRTYPVETLYRP----WDDDYQDINEAIVGAIEEILTMPHKSDGDILVFLSG 309 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 EREIR+ + A+ K + RH EILPLYARLS +EQNRVFQ+H GRR+VLATNVAETSLTVPG Sbjct: 310 EREIREASHAIKKADFRHLEILPLYARLSLAEQNRVFQAHRGRRVVLATNVAETSLTVPG 369 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I YVIDPG ARISRYS RTKVQRLPIE ISQASANQRKGRCGRVS G+CIRLY E DFL Sbjct: 370 IGYVIDPGRARISRYSVRTKVQRLPIEAISQASANQRKGRCGRVSNGVCIRLYDEADFLG 429 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 RPEFTDPEI RTNLA+V+LQM L +GD+ F FV+ P+ R I DG +LLEE+ A+ Sbjct: 430 RPEFTDPEIQRTNLAAVVLQMLQLRIGDVRKFDFVDRPENRLINDGFKLLEEIQAVD--- 486 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 K+T LGRQL LP+DPR AR++L +H C+RE +II S LSIQDPR+RP +K+Q Sbjct: 487 --RKGKITALGRQLYSLPLDPRFARIILAGAEHNCLREILIIVSGLSIQDPRDRPAEKRQ 544 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 A+DEKHRRF D+ SDFL F NLWNY+ EQ++ LS N ++LC+ +++NYLRVREW+D++ Sbjct: 545 AADEKHRRFWDENSDFLGFYNLWNYIEEQRQELSQNQLQKLCKKEFINYLRVREWRDLHH 604 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQ---------------EY 644 QLR +K LG+ N++PA Y +H AL+ GLLS++G+K + Y Sbjct: 605 QLRLAIKGLGLKENADPANYENVHRALVVGLLSNLGLKQEEAAKPGNKKEGGRPQQAFSY 664 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 G+RN RF IFPGS FKK PKW+ AE +ET++L+ +AA+++P W A+HL+K Y Sbjct: 665 HGSRNRRFQIFPGSSQFKKRPKWLAAAEFIETTQLYAHMAAKVEPLWALDAAEHLVKHHY 724 Query: 705 SEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRH- 763 EP ++ QG VMA +++T++GLP+V ++V YS+++ RE+FIR ALVEG + Sbjct: 725 HEPFYDATQGQVMAYDRITLFGLPLVEKQRVQYSKVNREESREVFIRQALVEGHYWRNKR 784 Query: 764 ---------------------------AFFRENLKLRAEVEELEHKSRRRDILVDDETLF 796 FF N L A VE LE KSRRRDILVDD+ +F Sbjct: 785 TKKAVETARVNWQKANQYGAGDLASIDHFFVYNEALSARVESLEAKSRRRDILVDDQVVF 844 Query: 797 EFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN 856 +FYD + D+ + F+ W K+ LL ++ L+ A I+ +P+ Sbjct: 845 DFYDAVLPADIANLASFEHWRKQEEMTNAQLLRMDQESLMLHSAGDITGAQFPDAIELDG 904 Query: 857 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 916 + L L Y FEPG DGV+V +P+ L+ V ES +W +PGL RE IAL+K+LPKP+R+ Sbjct: 905 VTLPLRYHFEPGDPDDGVSVCVPVDFLHMVPESRLQWLVPGLLREKCIALVKALPKPLRK 964 Query: 917 NFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVV 976 VP P + + L R+ P+ PL +L E R + + + + W ++ ++ +VV Sbjct: 965 QLVPVPQFVDRALARLAPVNQPLTTALAAEFRHLANIEIPDDAWQTGELDPFYRMNIQVV 1024 Query: 977 DDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNY 1036 DD+ + R + LK+ + +V+++LS A+ +E++ + W FG+LP R Sbjct: 1025 DDRGAVIDRSRDIVSLKEQYRSQVKKSLS-QANHALERNDIAQWDFGELPSQVTIPRNGV 1083 Query: 1037 KVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLG 1096 +VK +PALVD + V + + DNPL+ ++ G RL L + +KYL ++L LG Sbjct: 1084 EVKGFPALVDMANHVKLTVVDNPLDARRETRRGTLRLAALELSQTVKYLSKQLLKGRDLG 1143 Query: 1097 LYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQV 1156 L G ++I+D I + + V ++ F A + R+EL + + Sbjct: 1144 LAVLDIGTRDQVIEDIIFAAIQRACFNEQPWVADQQAFKAKLDHGRSELVTIAQEYEAVL 1203 Query: 1157 EQILTAVFNINKRLKG-RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQA 1215 + L+ +I K +K + + +A DI+ Q L GF++ ++ L RYLQA Sbjct: 1204 AECLSLSISIKKAMKSNKNALLLAFTFGDIQHQFQQLFAAGFMSDTPWQWLQHYPRYLQA 1263 Query: 1216 IEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE-DEDVKEIRWMIEELRVS 1274 I R+EK +P RDR Q +E Q + + K+ +E RWM+EELRVS Sbjct: 1264 ILVRMEKAPQNPQRDRVQCAALETHWQRHEDLLRKVGHGHYTSSPAWQEYRWMMEELRVS 1323 Query: 1275 YFAQQLGTPYPISDKRILQAMEQI 1298 FAQ L T P+SDKR+ +++ Sbjct: 1324 LFAQTLKTLMPVSDKRLNNQWQKV 1347 >UniRef50_B2U9W9 ATP-dependent helicase HrpA n=11 Tax=Betaproteobacteria RepID=B2U9W9_RALPJ Length = 1333 Score = 1501 bits (3887), Expect = 0.0, Method: Composition-based stats. Identities = 590/1281 (46%), Positives = 838/1281 (65%), Gaps = 55/1281 (4%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM----ELGRGI 121 P IT+P+ LPVS ++ +I +AI +QVVIV+GETGSGKTTQLPKIC+ +G G Sbjct: 60 NRVPPITFPEALPVSARRDEIAQAIAANQVVIVSGETGSGKTTQLPKICLSIGRGIGAGG 119 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 GLIGHTQPRR+AA + A RIA+E+ T G +G++VRF+D +S VKLMTDGILLAE Sbjct: 120 TGLIGHTQPRRIAATSTAKRIAQEIGTPVGEHVGFQVRFNDTLSAGASVKLMTDGILLAE 179 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 Q D LL YDTIIIDEAHERSLNIDFL+GYLK+LLPRRPDLK+IITSATID +RF+ HF Sbjct: 180 TQNDPLLRAYDTIIIDEAHERSLNIDFLIGYLKQLLPRRPDLKLIITSATIDAKRFAEHF 239 Query: 242 ----NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFM 297 AP+IEVSGR YPVEVRYRPI + D ERD +A+ DAVDEL++E GD+LIF+ Sbjct: 240 AGPKGPAPVIEVSGRLYPVEVRYRPIQRDEKDKERDLYEALVDAVDELAREGPGDVLIFL 299 Query: 298 SGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTV 357 GEREIR+ A+AL K + HTEILPL+ARLS EQ RVF+ + RRIVLATNVAETSLTV Sbjct: 300 PGEREIREAAEALRKHHPAHTEILPLFARLSVQEQERVFRPSNARRIVLATNVAETSLTV 359 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI+YV+D G AR+ RYSYR KV++L IEP+SQA+ANQR GRCGRV++G+CIRLY E DF Sbjct: 360 PGIRYVVDTGLARVKRYSYRNKVEQLQIEPVSQAAANQRAGRCGRVADGVCIRLYDEADF 419 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 ++RP FTDPEILR++LA+VIL+M AL L D+ FPF+E P R I DG +LL+ELGA+ Sbjct: 420 IARPRFTDPEILRSSLAAVILRMKALRLTDVEQFPFIEPPLGRAIADGYQLLQELGAVDD 479 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 + LTPLG+Q+++LP+DPR+ARM+L + H C+RE +II SALS+QDPRERP + Sbjct: 480 EN-----ALTPLGKQVARLPLDPRVARMILAGRDHQCLREMLIIASALSVQDPRERPQEL 534 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVREWQD 596 QQ +D+ HR+F D++S+FL +V LW + E S+ + CR+ +L+++R+REW+D Sbjct: 535 QQQADQAHRQFADEKSEFLGWVKLWKWFEEAVAHKKSNKQLQEQCRSHFLSHVRLREWRD 594 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMK----DADKQEYTGARNARF 652 +++QL V E G +N Y ++H+ALLTGLL +IG++ D +EY GAR +F Sbjct: 595 VHSQLHTTVAEQGWKLNESDPTYEQLHLALLTGLLGNIGVRIEEADGKGREYLGARGIKF 654 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 ++PGS + +K KWV+ EL+ETSRL+GR ARI+PEWVE V HL+K ++S+PHWE+ Sbjct: 655 FLWPGSVIARKAGKWVVGGELIETSRLFGRTLARIEPEWVEKVGAHLLKVSWSDPHWEKK 714 Query: 713 QGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKL 772 G VMA E+ T+YGLPI R+V++ + P RE+FIR ALV+G+++TR FF N +L Sbjct: 715 AGQVMAFERGTLYGLPIYQQRRVHFGPMQPKEAREMFIRRALVDGEFETRLPFFTHNQRL 774 Query: 773 RAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVS----RETPDLL 828 E+E LEHKSRR+D+LVDDE ++ FYD +I D+ + F+ W+ + + + LL Sbjct: 775 VREIENLEHKSRRQDVLVDDELIYAFYDSQIPADIYNTVSFERWYAEAASAGGKSGQKLL 834 Query: 829 NFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEE 888 + L++ A I+ +P + + L+Y FEPG+ DGVT+ +PL LNQV Sbjct: 835 YLNRDDLMRHEAAGITTDLFPKVLPIAGIDMGLTYHFEPGSPRDGVTLTVPLYALNQVPA 894 Query: 889 SGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELR 948 EW +PG+ +E V L+KSLP+ +RR+ VP P+YA F+ RV+ + LLD L ++R Sbjct: 895 QRTEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFVARVRLGDGDLLDRLIADVR 954 Query: 949 RMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA 1008 TG+ + R D+ + +P H + F+V+D+ ++L GR+L L+ L G+ Q+T ++A Sbjct: 955 EQTGMALKRADFKLETLPAHHFMNFKVIDEHGRQLDMGRNLAQLRAELGGRAQQTFQSIA 1014 Query: 1009 DDGIEQ----------------------------SGLHIWSFGQLPESYEQKRGNYKVKA 1040 SGL W+FG+LPE E ++G+ + Sbjct: 1015 AQDAAVAGTPSEGTKAGQAGKSGKAEAPANAALYSGLTTWNFGELPELLEVRKGSQTLFG 1074 Query: 1041 WPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFN 1100 +PALVD D +++FD+P + + GLRRL + + P+KYL + +P +++ + F Sbjct: 1075 YPALVDAGDHCDVEVFDDPAQATRIHGLGLRRLFAIQLREPLKYLEKNIPGLSQMAIQFM 1134 Query: 1101 PYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQIL 1160 G +L D + +++ + P+ + F A ++ RA L +IA+ V IL Sbjct: 1135 NLGTQDDLRDQILDATLERACLQDPLPI-DDASFGARKDESRARLTLLAQEIARLVGAIL 1193 Query: 1161 TAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRL 1220 + ++L+ + A +DI AQ+ L+++ F+ + +L RYL+ I R+ Sbjct: 1194 AEYAQLPRKLQ--IAKPFAAATADIDAQLKTLMHKRFIEATPYAQLTHFPRYLKGIALRI 1251 Query: 1221 EKLAVDPHRDRAQMLKVENVQQAWQQWIN--KLPPARREDEDVKEIRWMIEELRVSYFAQ 1278 +KL DP RD +M ++ + Q +Q+ ++ D ++E RWM+EELR++ FAQ Sbjct: 1252 DKLKADPARDTQRMQEMAPLIQQYQRAEKALRVQGQGGNDPRMEEFRWMLEELRIALFAQ 1311 Query: 1279 QLGTPYPISDKRILQAMEQIS 1299 +L TP P+S KR+ + E + Sbjct: 1312 ELRTPVPMSVKRLQKVWESMQ 1332 >UniRef50_C1DAE5 HrpA n=2 Tax=Betaproteobacteria RepID=C1DAE5_LARHH Length = 1290 Score = 1500 bits (3884), Expect = 0.0, Method: Composition-based stats. Identities = 598/1266 (47%), Positives = 828/1266 (65%), Gaps = 16/1266 (1%) Query: 37 VKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVV 96 +K + ++ +A KV R P + + LPV+QK+ ++L AI +QVV Sbjct: 35 IKAGKPADRLAAQLLAAAQASADKVAARRERLPVPAFDEALPVNQKRDELLAAIDANQVV 94 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 IV GETGSGKTTQLPK+C++LGRG +GLIGHTQPRRLAAR+VA+RIAEEL T+ G +G+ Sbjct: 95 IVCGETGSGKTTQLPKLCLQLGRGTRGLIGHTQPRRLAARSVASRIAEELGTQIGQGVGF 154 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 KVRF+D SD + +KLMTDGILLAE Q DR L YDT+IIDEAHERSLNIDFLLGYL++L Sbjct: 155 KVRFTDRTSDQSFIKLMTDGILLAETQTDRYLEAYDTLIIDEAHERSLNIDFLLGYLRQL 214 Query: 217 LPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE-EADDTERDQL 275 LPRRPDLKIIITSATID ERFSRHFN AP+IEVSGRTYPVEVRYR + E + DD + Sbjct: 215 LPRRPDLKIIITSATIDAERFSRHFNGAPVIEVSGRTYPVEVRYRALGEKDEDDRDLAME 274 Query: 276 QAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR-HTEILPLYARLSNSEQNR 334 AI DAVDEL++ GDIL+F+ GEREIRDTA+AL K L E+LPL+ARLSN EQNR Sbjct: 275 DAIVDAVDELARLGSGDILVFLPGEREIRDTAEALRKARLTVRYEVLPLFARLSNEEQNR 334 Query: 335 VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 +F+ +GRRIVLATNVAETSLTVPGI+YVID G ARI RYS R KV++L +E ISQA+A Sbjct: 335 IFKGSNGRRIVLATNVAETSLTVPGIRYVIDTGLARIKRYSPRAKVEQLLVEKISQAAAR 394 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GRCGRV+ G+CIRLY+EDDF +RP FTDPEI+R+NLA+VIL+M +L LG + FPF+ Sbjct: 395 QRAGRCGRVAAGVCIRLYAEDDFNARPAFTDPEIVRSNLAAVILRMASLRLGAVVEFPFI 454 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 + P R I DG +L ELGA++ +LTPLGR+L+++PVDP++ RM+L A+ + C Sbjct: 455 DPPSARLIADGYDVLHELGAVSE-----RGELTPLGRELARIPVDPKIGRMLLAARDYHC 509 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 +RE +++ SALSIQDPRERP D ++A++ RF D+ SDFL F+ LW++ + K S Sbjct: 510 LREMLVLVSALSIQDPRERPFDAREAAERAQARFADERSDFLGFLALWDFFDDALKHKKS 569 Query: 575 N-AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSH 633 N LC + +L++LR+REW++++ QL Q+ +L + N PA + ++H ALLTGLL + Sbjct: 570 NRQLVELCHSHFLSHLRLREWRELHGQLAQIAHDLELRENQTPATFEQLHKALLTGLLGN 629 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 +GMK + +Y GAR F +FPGSGL K PKW++ EL ETSRL+ R ARI+PEW+E Sbjct: 630 LGMKSMEGDDYLGARGIHFHVFPGSGLKKSKPKWLVAGELTETSRLYARTVARIEPEWIE 689 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 P+A HL+KR Y EPHWE+A+G V+A+E+VT+YGL IV R V+Y +ID R++F+R A Sbjct: 690 PLAMHLVKRHYFEPHWEKARGEVVASERVTLYGLNIVPRRTVSYGRIDATEARQIFVREA 749 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 L G T+ FFR N +L EVEELEHK+RR+D+LVD+ETL FYD+RI D+ AR F Sbjct: 750 LANGQLHTQAPFFRHNQRLIREVEELEHKARRQDVLVDEETLVAFYDERIPADICDARSF 809 Query: 814 DSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADG 873 D+W + + P LL ++ L++ AE I++ +P + + +LRL Y+FEP DG Sbjct: 810 DAWREGAEKADPKLLFLDRDYLMQHAAEHITEEQFPEWLDTPDGRLRLRYRFEPNHPLDG 869 Query: 874 VTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK 933 VTV +PL +LN++E + EW +PG+ RE + LIK+LPK +RR VP P++ FL Sbjct: 870 VTVDVPLAILNRLEPARLEWLVPGMIREKLALLIKALPKQIRRACVPVPDFVTRFLSTGP 929 Query: 934 PLELPLLDSLERELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDL 992 + P+ L R + R T GV VD + ++P H ++ RV+DD ++L GR L L Sbjct: 930 RQDQPVGPQLARFILRETGGVEVDPAAFEAAELPAHARMNLRVLDDGRQELGMGRDLVTL 989 Query: 993 KDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVA 1052 + + T + E+ + W G LPES + RG ++ +PAL E D VA Sbjct: 990 QKQFGTAAELTF-RDSTHEFERDDVQGWDVGNLPESIQFARGRQQLTGYPALACEEDRVA 1048 Query: 1053 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC 1112 ++LFD P + + A G+ RLL + +K L + LP ++ L L+DD Sbjct: 1049 LRLFDTPEKARAAHRQGVVRLLRRELKEHMKQLAKGLPGFTQIALQLRGVASADALLDDA 1108 Query: 1113 ISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKG 1172 ++C D+ + +++ F ++ R L + + + I ++ Sbjct: 1109 VACICDRAFIGDDDAPRSQKAFDEQKKRARTRLPAVTQAVTQYLTAIAAEYTK-TTQMAD 1167 Query: 1173 RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1232 + + +I+A LVY GF+ + +L + RYL+A + R++K A + RD Sbjct: 1168 KHRLG-PKLGPEIRA----LVYPGFLAATPWAQLPNLPRYLKAKQLRMDKYASNSQRDGQ 1222 Query: 1233 QMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 + +V + Q W + +L + +++ RW+IEELRVS FAQ+L TP+P+S KR+ Sbjct: 1223 RGAEVAALWQRWADKVAELDAREGAPQALRDFRWLIEELRVSLFAQELKTPFPVSVKRLE 1282 Query: 1293 QAMEQI 1298 +A + Sbjct: 1283 KAWADL 1288 >UniRef50_A4BTJ3 ATP-dependent helicase HrpA n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTJ3_9GAMM Length = 1294 Score = 1492 bits (3864), Expect = 0.0, Method: Composition-based stats. Identities = 588/1294 (45%), Positives = 827/1294 (63%), Gaps = 11/1294 (0%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 F L+ +L L F RRL+G+ ++ + + + ++ + R+ Sbjct: 9 RPFQELKTQLTRLPRAWVPTFRRRLYGLERRQRQGRPFEQGLNRLKHDLANVQQRYEQRQ 68 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 + + + LP+ ++ +I A+ HQV++V G+TGSGK+TQLP+I + G G++G+I Sbjct: 69 SQVLQPAFSAALPIMDQRAEIARALSAHQVIVVCGDTGSGKSTQLPQIALASGFGVEGMI 128 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 HTQPRR+AAR++A RIAEEL TE G +GYKVRFSD V +T +KL+TDG+LLAE Q D Sbjct: 129 AHTQPRRIAARSLATRIAEELNTEVGAGVGYKVRFSDRVRFSTRLKLVTDGMLLAETQGD 188 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 L YDTIIIDEAHERSLNID+LLGYLK LLPRRP+LK+IITSATIDP+RFSR+FN AP Sbjct: 189 PDLAHYDTIIIDEAHERSLNIDYLLGYLKRLLPRRPELKVIITSATIDPQRFSRYFNGAP 248 Query: 246 IIEVSGRTYPVEVRYRPIV-EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIR 304 II+++GR+YPVE+RYRP+V E+ D+ +R +AI +A+DEL+ E+ GD+L+F+ ER+IR Sbjct: 249 IIQIAGRSYPVEIRYRPLVSEDEDERDRSLPEAILEALDELAAETAGDVLVFLPSERDIR 308 Query: 305 DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVI 364 +TA+ L K + TE+LPL+ RLS +EQ RVF H RRIVLATNVAETSLTVPGI++V+ Sbjct: 309 ETAENLRKHHPPRTEVLPLFGRLSATEQLRVFAPHDRRRIVLATNVAETSLTVPGIRHVV 368 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G ARISRYSYRTKVQRLPIEPIS+ASA+QR GRCGR + G+CIRLY+E D+ R EFT Sbjct: 369 DSGLARISRYSYRTKVQRLPIEPISRASADQRAGRCGREAPGVCIRLYAEADYQVRAEFT 428 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 +PEILRTNLASVILQM L LG+I F F++ PD R I+DG++LL ELGA+ D Sbjct: 429 EPEILRTNLASVILQMKYLKLGEIERFDFIDPPDSRAIRDGLKLLYELGAVAADN----- 483 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT LGR+L+ LPVDPR+ARM++ + + E ++I +ALSI DPR+RPM+ QA+D Sbjct: 484 TLTGLGRRLAALPVDPRIARMLVAGETERALNEVLVIAAALSIPDPRQRPMNAPQAADAA 543 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 R+ D+ SDFLA V LWN EQ + LS R C +L+Y+R+REW+DI+ QLR++ Sbjct: 544 QARWRDQRSDFLALVKLWNDAQEQTRELSQRKLRLWCAEHFLSYVRLREWRDIHHQLREL 603 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 V +G N++ A+ +H ALLTGLL +I + D+Q YTGAR + IFPGSG+ K+ Sbjct: 604 VMGIGWRENAQQADTAAVHRALLTGLLGNIAWRT-DEQHYTGARGLKLLIFPGSGIAKRR 662 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTV 724 P+W++ AELVETSR++ R I PEWVEP+A HL++R Y EP WE +G V E VT+ Sbjct: 663 PRWIVAAELVETSRIFARTVGEIRPEWVEPLAAHLVQRRYFEPFWEEKKGRVAGYESVTL 722 Query: 725 YGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSR 784 YGLP+VA RK++Y+++DPA R LFIR LV G +T+ F N +L AE+E LE KSR Sbjct: 723 YGLPLVARRKIDYTRVDPAAARALFIREGLVYGRLRTQGRFLAHNRQLIAEIEALEAKSR 782 Query: 785 RRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKIS 844 RRD+LVD++ L FY +R+ D+ F+ W ++ + L +L++ A +I+ Sbjct: 783 RRDVLVDEDVLAAFYAERLPADLADGASFERWIRRPEHDQ--ALFMTPQLLMEREAVEIT 840 Query: 845 KLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVI 904 YP G ++L L Y F+ ADGVTV +PL LNQ+ FEW +PGL +E V+ Sbjct: 841 ADAYPEHLSVGGMRLPLRYHFDLNQAADGVTVIVPLAALNQLALERFEWLVPGLLQEKVV 900 Query: 905 ALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQ 964 ALI+SLPK +RRNFVP P +A A L L+ + EL+RMTGV + + W + Sbjct: 901 ALIRSLPKRLRRNFVPVPEFAAAILAAAPQGTGSLIQVVRDELKRMTGVLIPFDAWENVE 960 Query: 965 VPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQ 1024 + HL++ FRVVD + + EGR L L+ L + + A + GL W F Sbjct: 961 LAAHLQMNFRVVDTHGRTVGEGRDLAALQRELGTCARVQ-AGDARHRWGRRGLQRWDFDT 1019 Query: 1025 LPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKY 1084 L E E ++ +PA+VDE +SVA+ L D+P + + G+R+L +L +P KY Sbjct: 1020 LDEHVEFNDAGITLRGYPAVVDEGESVALHLLDSPEQAARTSLGGIRKLFMLQLPDQAKY 1079 Query: 1085 LHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 L KLP +L L ++ G D ++ ++ +G T E F A + R E Sbjct: 1080 LRRKLPGIDRLCLLYSVLGSCEAFKQDFLAATYQRVFMPDGTLPRTREAFQARLQAGREE 1139 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 L T +A+ + Q+L +R K + D++ Q+ +VY GFV + Sbjct: 1140 LIPTATRLAQTLLQVLEHYQEARQRFKAPLPPAQLESYRDMREQLDAMVYAGFVQDTPSE 1199 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 LG+ RY++A+ +RLE+L DP +DR + + + + +++ + ED ++ Sbjct: 1200 WLGELPRYMRALVRRLEQLRRDPGKDRRGLQAIRPLWEQYRRRREQHARQGTEDLQLEHY 1259 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RW++EE RVS FAQ+LGT +S+KR+ A +++ Sbjct: 1260 RWLLEEYRVSLFAQELGTREKVSEKRLRTAWQRV 1293 >UniRef50_B2GLW1 ATP-dependent RNA helicase HrpA n=7 Tax=Bacteria RepID=B2GLW1_KOCRD Length = 1418 Score = 1478 bits (3826), Expect = 0.0, Method: Composition-based stats. Identities = 669/1372 (48%), Positives = 869/1372 (63%), Gaps = 141/1372 (10%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 A P I YPDNLPVS +++DI+ AIR++QVV+VAGETGSGKTTQLPK+C+ELG G +GLIG Sbjct: 49 ATPRIVYPDNLPVSARREDIMSAIRENQVVVVAGETGSGKTTQLPKMCLELGLGERGLIG 108 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AAR+VA RIA EL G +GY+VRF+ V ++ +KLMTDGI+LAEI D Sbjct: 109 HTQPRRIAARSVAERIAHELGERVGATVGYQVRFTSEVGRDSRIKLMTDGIMLAEISHDP 168 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN---- 242 L +Y+ IIIDEAHERSLNIDFLLGYL+ LLP+RPDLK++ITSATIDP+RF+ HF Sbjct: 169 TLSRYNAIIIDEAHERSLNIDFLLGYLRRLLPQRPDLKVVITSATIDPQRFAEHFAQPDP 228 Query: 243 --------NAPIIEVSGRTYPVEVRYRPIVEEAD---------------DTERDQLQAIF 279 AP+IEVSGRTYPVE+RYRP+ +E D +RD + A+ Sbjct: 229 EHPEAEPVPAPVIEVSGRTYPVEIRYRPLTQERSGDGGPDEEDTGDGLADEDRDPIDAVC 288 Query: 280 DAVDELSQESHGDILIFMSGEREIRDTADALNK-----LNLRHTEILPLYARLSNSEQNR 334 DAV ELS+E GDIL+F +GEREIRD DAL K +L T+ILPL+ RLS +EQNR Sbjct: 289 DAVVELSREPRGDILVFFAGEREIRDAQDALQKVIDSHRSLAGTQILPLFGRLSMAEQNR 348 Query: 335 VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 VF S RRIVLATNVAETSLTVPGIKYV+DPGTARISRYS RTKVQRLPIE ISQASA Sbjct: 349 VFSQSSHRRIVLATNVAETSLTVPGIKYVVDPGTARISRYSARTKVQRLPIERISQASAK 408 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAA 450 QR GR GR S+G+CIRLYSE+DF SRPEFTDPEILRTNLA+VILQM ++G+ GDI Sbjct: 409 QRSGRSGRTSDGVCIRLYSEEDFESRPEFTDPEILRTNLAAVILQMISVGVVREPGDILD 468 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK------------------------- 485 FPFV+ PD R ++DGV LL+ELGA+ ++ + Sbjct: 469 FPFVQKPDPRAVKDGVVLLQELGALRGPGASAEHDDAASPPARRSRGGRRGRGRKGGARG 528 Query: 486 -LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT G L+ LPVDPRL RM++EA + GC RE +++T+AL++QDPRERP++K+QA+DE Sbjct: 529 PLTRTGEILAALPVDPRLGRMIVEADRRGCAREVLVLTAALTVQDPRERPLEKRQAADEF 588 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H RF DK SDFL++ LW YL EQQ LSS+ FR+LCR +YLN+LR+REWQD+Y QLRQ+ Sbjct: 589 HARFKDKTSDFLSYGLLWQYLQEQQAELSSSQFRKLCRREYLNFLRIREWQDLYAQLRQI 648 Query: 605 VKELGIPVNSE-----PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 ++ GI V A ++H +LL+GLLS+IG++D +EY GAR RF+IFPGS Sbjct: 649 ARQSGIDVGGSREIDVAAHQDDVHKSLLSGLLSNIGVRDERSREYRGARGTRFAIFPGSA 708 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 LFKK P W++ AELVETSRLW R A I PEW E +A L+KR+YSEPHW R++GAVMA+ Sbjct: 709 LFKKSPDWIVSAELVETSRLWARTNAAIQPEWAEEIAPSLVKRSYSEPHWSRSRGAVMAS 768 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 EKVT+YGLP+V+ R V +S IDP L RELFIRHALVEGDWQTRH F + N K AEVEEL Sbjct: 769 EKVTLYGLPLVSERPVLFSSIDPELSRELFIRHALVEGDWQTRHTFVKRNRKALAEVEEL 828 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E++ RR+D+ VDD+ LF+FYD R+ +V+S RHFD+WWKK + LL+ LI Sbjct: 829 ENRMRRKDLRVDDQVLFDFYDARVPANVVSQRHFDAWWKKARHQDEHLLDLTPEDLIAPE 888 Query: 840 AEKISKLDYPNFWHQ----GNLKLRLSYQFEPGAD-ADGVTVHIPLPLLNQVEESGFEWQ 894 A + +P WH G+L L L Y+F PG D ADGVTV IP+ L+++ FEW Sbjct: 889 APALDTDSFPRSWHVHSPEGDLSLDLDYEFAPGTDTADGVTVRIPVLFLDRLAPEQFEWH 948 Query: 895 IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK----PLELPLLDSLERELRRM 950 IPGLR ELV ALIKSLPK VRRNFVPAP+ A A + R+ P LL++L LRRM Sbjct: 949 IPGLRVELVTALIKSLPKAVRRNFVPAPDTAAAAVRRLDEEFDPPSGSLLEALATVLRRM 1008 Query: 951 TGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQD----LKDALKGKVQETL-- 1004 G V D+H + +P HL++ F V D ++ L G L + L+ ++ + ++L Sbjct: 1009 RGHPVQASDFHPETLPPHLRMRFEVRDARSAVLGRGDDLTELKQRLRPRVREALAQSLGQ 1068 Query: 1005 ------------------------------------------------SAVADDGIEQSG 1016 A + +E++ Sbjct: 1069 AAAQLYDAAGTSASAASGGDDDAAPGSRRGRRSGRDDRKGRGSARPDERAASSASLERTD 1128 Query: 1017 LHIWSFGQLPESYEQKRGNYKVKAWPALVD---------ERDSVAIKLFDNPLEQKQAMW 1067 L W P S E V +P LV E V +++ +P EQ+ A Sbjct: 1129 LRAWPEPDPPRSVETTVAGQTVTGYPTLVAVAPEKPGSTEPPRVDLRILSDPEEQRAAQR 1188 Query: 1068 NGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP 1127 +G+ LL +PS +Y+ + L + +L NP+G V LI DC +D+L+ + P Sbjct: 1189 DGVIALLQRVLPSVHRYVVDHLSQRERLIFTQNPHGSVEALIHDCTGAAIDRLVPHD--P 1246 Query: 1128 VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKA 1187 +T F L E VRAEL DTV D+ V LT + KRLK + +D+ Sbjct: 1247 PFTRAEFDRLAEHVRAELIDTVFDVTALVTTALTEATTVRKRLKKPGSLGAVPAFTDMAE 1306 Query: 1188 QMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQW 1247 Q+ L++ GFV G++ L RYL + RL+KL+ RD M V ++ A++ Sbjct: 1307 QVDRLIHPGFVARTGWQALQHLPRYLAGVNARLDKLSGHLQRDAVAMQTVHELEAAYRAA 1366 Query: 1248 INKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 ++ +PP ++EIRW +EELRVS+FAQ+LGT + +S+KR+ + + ++ Sbjct: 1367 LDTVPPTVPTPAALREIRWDLEELRVSFFAQELGTAHTVSEKRLRKKLRELG 1418 >UniRef50_A6C1G8 ATP-dependent helicase HrpA n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1G8_9PLAN Length = 1334 Score = 1476 bits (3822), Expect = 0.0, Method: Composition-based stats. Identities = 565/1317 (42%), Positives = 799/1317 (60%), Gaps = 33/1317 (2%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKV-KNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 + L + + M D+ RFS+RL +++ K+ Q + +E++++ + R Sbjct: 23 ALSELPKLISQAMAGDQFRFSQRLRSIRQAQKSKKPFDKNLQRLREELEKSLARRDERLK 82 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 P+IT+ +LP+ Q+ I + I ++QVVIV GETGSGK+TQLPK+ + +GRGI G+IG Sbjct: 83 RCPKITFDQSLPIHQELATIQKTIEENQVVIVCGETGSGKSTQLPKLLLSMGRGISGIIG 142 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AAR+VA RI+EEL E G G+K+RF+D + NT +KLMTDGILLAE Q D Sbjct: 143 HTQPRRIAARSVAARISEELGREQGTACGFKIRFTDTTNPNTYIKLMTDGILLAETQTDS 202 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----N 242 L QYDTIIIDEAHERSLNIDFLLG+LK LLP+R DL++IITSATID ERFS HF Sbjct: 203 FLNQYDTIIIDEAHERSLNIDFLLGFLKRLLPKRRDLRVIITSATIDAERFSEHFAGSEG 262 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTE-------------RDQLQAIFDAVDELSQES 289 API+ VSGRTYPVE+RYRP +E E RD+ + DAV+EL+ Sbjct: 263 PAPILNVSGRTYPVEIRYRPFDDEPAGKEAGKETGNKSQNSSRDEQSQLADAVNELAAID 322 Query: 290 HGDILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQSHSGRR 343 GDILIF++ E +IR+TA L ++ R TEI+PLY RLS +EQN+VF+ S RR Sbjct: 323 DGDILIFVATEWDIRETAKLLRGRSIIGDDGGRQTEIVPLYGRLSTAEQNKVFRPSSYRR 382 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 IV+ATNVAE+S+TVPGI+YVID G ARISRYS R++VQRLPIE +SQASANQR GRCGRV Sbjct: 383 IVIATNVAESSITVPGIRYVIDTGLARISRYSSRSQVQRLPIEAVSQASANQRAGRCGRV 442 Query: 404 SEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 + GICIRLYSE D+ SR EFT PEILRTNLASVILQ + LG I FPF++ P I+ Sbjct: 443 APGICIRLYSEADYKSRDEFTSPEILRTNLASVILQTLNMRLGAIEEFPFIDPPKPTAIR 502 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 DG L ELGAI +LT +GR++S+LPVDPR+ARM+L A C+ E +II + Sbjct: 503 DGYSTLFELGAIDEQN-----RLTDIGRKISRLPVDPRIARMILAAHDENCLHEILIIAA 557 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 AL +QDPRERP++KQQA+DE H +F D +SDFL+F+ LW++ + ++ S + RR C Sbjct: 558 ALELQDPRERPIEKQQAADEAHEQFRDPDSDFLSFLKLWDFYHKLKEEQSHSKLRRACVQ 617 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQE 643 ++L+Y R+REW DI+ QLRQ+V+E GI + + IH ALL GLLS+I M+ D E Sbjct: 618 NFLSYNRLREWADIFRQLRQLVEESGIKPHPRKDDSAAIHRALLPGLLSNIAMRS-DSHE 676 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 YTGA ++ ++PGSG+F+K PKW++ AEL+ETS+ + R A+I P W+EP A HL+K++ Sbjct: 677 YTGAGQQKYFLWPGSGIFEKKPKWIISAELIETSKRYARTVAKISPNWIEPAAPHLVKKS 736 Query: 704 YSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRH 763 +S+P W + +A EKVT++GL IV R V+Y +IDP R L +++ LVEGD Sbjct: 737 WSDPRWNGEAASAVAAEKVTLFGLTIVPRRSVHYGKIDPEHSRTLLLQYGLVEGDININV 796 Query: 764 AFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRE 823 F N K ++E+ + +SRR D++ E F +YDQRI DV WWK S + Sbjct: 797 DFLAHNQKFIEDLEQQQARSRRYDLIPSQEQQFAYYDQRIPEDVYDGVSLKKWWKVASLK 856 Query: 824 TPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLL 883 TP LLN +E+I + ++P+ + G ++ L Y EPGA+ DGVTV IP L Sbjct: 857 TPTLLNMRLEDFFDTQSEEIDEGEFPDAINMGKMQFPLEYHLEPGAEEDGVTVSIPQESL 916 Query: 884 NQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSL 943 NQ+ W +PGL E V A+IK+LPK VRR VPAP A+ + +++ + +++ Sbjct: 917 NQLSPQRLGWLVPGLLEEKVAAMIKALPKAVRRMLVPAPETAKQVVSKLEFGKGSFEETV 976 Query: 944 ERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQET 1003 L +++G + + + ++P HL++ RV+D + R+L L+ K + Sbjct: 977 AEMLSQISGERITADQFEIQRLPQHLQMNIRVLDQGGDAIAVNRNLTQLRQEYGSKAASS 1036 Query: 1004 LSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQK 1063 +A++DD QSGL W+FG P + + + +P+LVDE+ SVA+ L D P Sbjct: 1037 FTALSDDHWSQSGLTDWTFGDFPAEVQIQHDQLSLTGFPSLVDEQTSVALCLRDAPERAA 1096 Query: 1064 QAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDA 1123 GLRRL +L+ +K E LP+ ++ LY G + L + + ++ + Sbjct: 1097 YETRFGLRRLFILSEHKRLKAQVEHLPDLNRISLYATAIGGIN-LREQLVELLAERTLFG 1155 Query: 1124 NGG-PVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGL 1182 E + L ++ R ++ D+A + + + L + L Sbjct: 1156 KKEQLPRNEAQYRQLVKEWRNQIPVAAQDLASLLPGLFEQYHKMKVTLDKTKVPAWSEPL 1215 Query: 1183 SDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV-DPHRDRAQMLKVENVQ 1241 D++AQ+ ++ F+ + L RYLQ +E RL KL +D A + + Sbjct: 1216 HDMRAQLNAMINNRFLVSTPYPWLQQFSRYLQGMEMRLSKLGGTGLKKDIANIRSISRYF 1275 Query: 1242 QAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + + Q + D + + RWM+EELRVS FAQ+LGT +S K + Q + Sbjct: 1276 ELYSQRARQHHEREIVDPQLIKFRWMLEELRVSLFAQKLGTALKVSPKILDQQWAAV 1332 >UniRef50_B9ZMZ4 ATP-dependent helicase HrpA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMZ4_9GAMM Length = 1307 Score = 1474 bits (3817), Expect = 0.0, Method: Composition-based stats. Identities = 592/1303 (45%), Positives = 820/1303 (62%), Gaps = 27/1303 (2%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 T AL Q + L + LR +R+ H K+ + D + E +Q + R+ Sbjct: 13 RTVEALPQGRERRELGELLRRARQRH--KRGQPCDRLVSTLTERLARAEQGGAE---RQH 67 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 RP+ TY +LP+ +++ I+ AIR+H V+++ GETGSGKTTQLPK+C+E GRG GLIG Sbjct: 68 LRPQPTYAGDLPIHAERERIVAAIREHPVLVLCGETGSGKTTQLPKLCLEAGRGETGLIG 127 Query: 127 HTQPRRLAARTVANRIAEELKTEPGG----CIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 HTQPRR+AAR+VA+RIAEEL T GG +G+KVRFSD N VKLMTDG+LLAE+ Sbjct: 128 HTQPRRIAARSVASRIAEELGTTLGGDRNSTVGFKVRFSDQTGPNNWVKLMTDGMLLAEL 187 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 D L YDT+I+DEAHERSLNIDFL+G LK L +RP+L+IIITSAT+DPER S F+ Sbjct: 188 AHDPELRAYDTLIVDEAHERSLNIDFLMGVLKRLSKKRPELRIIITSATLDPERLSAFFD 247 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDT-------ERDQLQAIFDAVDELSQESHGDILI 295 +API+ V+GRTYPVE+RYRPI E D ERD I DAV E + GDIL+ Sbjct: 248 DAPILTVAGRTYPVELRYRPIEPEDADEDNSTERGERDLFDGIRDAVAECERAGPGDILV 307 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 F+ GEREIRD AL TE+L LYARLS EQ RVFQSHSGRRIVLATNVAET+L Sbjct: 308 FLPGEREIRDAHKALRGQVRADTEVLALYARLSAREQARVFQSHSGRRIVLATNVAETAL 367 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI++VID G ARISRYS+R++VQRL +EPISQA+ +QR GRCGR+ GICIRL+SED Sbjct: 368 TVPGIRFVIDSGLARISRYSWRSRVQRLSLEPISQAACDQRAGRCGRLGPGICIRLFSED 427 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 D+ RP FTDPEI R+NLASVILQM AL LG FPFV+ PD R ++DG RLLEELGA+ Sbjct: 428 DYNLRPPFTDPEIQRSNLASVILQMAALKLGQPRQFPFVDPPDPRLVKDGYRLLEELGAV 487 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 + + TP GRQL+++P+DPR M+L HGCV E I + LS+QDPRERP Sbjct: 488 D-----TRGRTTPRGRQLARMPIDPRHGAMLLAGADHGCVTETATIAAFLSLQDPRERPA 542 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 + QA+D+ HR F + SDF+ + LW ++ L SNA +R CR +LN+LR+REWQ Sbjct: 543 EATQAADQAHREFQVEGSDFMGMLRLWEAWHTAREDLGSNALKRWCREHFLNFLRMREWQ 602 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 ++ QL ++ +E+ + N +PA+ +H ALLTGL+S IG K ++ +Y GARN RF I Sbjct: 603 ELRVQLLRLAREMDLKPNHQPADAEPVHRALLTGLVSQIGQKT-ERGDYLGARNRRFQIH 661 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 PGS L KK P WVM AE+ ET+R++ R ARI+P+W+ A HL+K EPH++R G Sbjct: 662 PGSVLAKKKPAWVMSAEIAETTRVYARDNARIEPDWILAAAPHLLKHHIFEPHFQRRSGR 721 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 V A +++T+YGL + + V++++ DP+ R + IR LV G+ +TR + N + AE Sbjct: 722 VGAFDRITLYGLVVAPKKPVDFAKHDPSEARRILIREGLVGGELRTRSKGVQANREAVAE 781 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSML 835 + E E + RRRD+LV+++ LF+FYD R+ D+ F++W +K ++ PD L +++ L Sbjct: 782 IAEQEARGRRRDLLVEEDRLFDFYDARLPADITDGTSFETWARKAEKQDPDALRIDRAEL 841 Query: 836 IKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQI 895 + E + + YP+ L+L L+Y+FEPG DGVTV IP+ LN V + +W + Sbjct: 842 LNEPDATLPQGAYPDHLELEGLRLPLAYRFEPGQPDDGVTVTIPIAALNAVPDWLGDWLV 901 Query: 896 PGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTV 955 PGL E V L+KSLPK +RR FVPAP++A A L R++ + PL+ +L LR MTG + Sbjct: 902 PGLLEERVTGLLKSLPKGLRRQFVPAPDFAAAALARIEHRQGPLIPALAEALRAMTGTEI 961 Query: 956 DREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQS 1015 + W + + HL + FR++D + ++ GR+L LK L G + A D I + Sbjct: 962 PLDAWRPETLEPHLVMRFRILDPEGQEQASGRNLAALKRRLGGSAEAHFDASRPDEITRE 1021 Query: 1016 GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 G+ W FG LPES E +++A+P LVD D+V+++L +P + ++A GLRRL L Sbjct: 1022 GITEWDFGALPESVEFDHQGAQLRAFPILVDRGDAVSLELEPDPAKAERAHRAGLRRLFL 1081 Query: 1076 LNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 L+ + L +LP + L ++ G L D + D++ A P E F Sbjct: 1082 LSARKTARDLRRQLPEIERACLNYSTLGSCEALRDQILEAAADRVFLAEPWP-RDAEAFR 1140 Query: 1136 ALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYR 1195 E E + TV+++++ +IL ++ RL+G + ++ DI+ Q+ LV Sbjct: 1141 ERLEARLPEFSPTVMELSRLAAEILRHWHDLRTRLQGDLPLSWIEAARDIRGQLEALVPA 1200 Query: 1196 GFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR 1255 F+ L + RYLQAI+KRLE+L P +DRA+ + VE + Q Q+ I + P Sbjct: 1201 DFLLRTPHDVLPELPRYLQAIDKRLERLTQAPDKDRARRVAVEPLWQQAQELIARAP--- 1257 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + DV R+ IEE RVS FAQ+LGT +S KR+ + + Sbjct: 1258 -DHPDVLAFRYRIEEFRVSQFAQELGTREKVSPKRLEREYADV 1299 >UniRef50_C8NU49 ATP-dependent helicase HrpA n=8 Tax=Corynebacterium RepID=C8NU49_9CORY Length = 1313 Score = 1474 bits (3817), Expect = 0.0, Method: Composition-based stats. Identities = 638/1324 (48%), Positives = 851/1324 (64%), Gaps = 44/1324 (3%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 +T AL+ RLD L + RF RRL KK K P+A AI ++ +E+ KV Sbjct: 6 SSPPITRDALKARLDELPIAQVRRFDRRL---KKAKAPNALAAIHTDLEEEV----AKVA 58 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 +A P+ITYP+ LPVS +++DI IRD+QVV++AGETGSGKTTQ+PK+ +ELGRG + Sbjct: 59 AIDALVPQITYPEQLPVSARREDIKNLIRDNQVVVIAGETGSGKTTQIPKMLLELGRGRR 118 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 GLIGHTQPRR+AARTVA RIA+EL + G +GY +RF D VS T VKLMTDGILLAE+ Sbjct: 119 GLIGHTQPRRIAARTVAERIADELGQDIGRSVGYAIRFDDRVSATTAVKLMTDGILLAEM 178 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF- 241 Q+DR L YDTIIIDEAHERSLNIDFLLGYLK LLP RPDLKIIITSATIDPE F+ HF Sbjct: 179 QRDRYLNAYDTIIIDEAHERSLNIDFLLGYLKRLLPYRPDLKIIITSATIDPESFAEHFA 238 Query: 242 ----NNAPIIEVSGRTYPVEVRYRPIVEE-------ADDTERDQLQAIFDAVDELSQESH 290 N APIIEVSGRTYPVE+RYRP+ E + D L + +A+ EL E Sbjct: 239 DSDGNPAPIIEVSGRTYPVEIRYRPLETEVPTKDGGTKVVDTDMLDGLIEALKELMAEGD 298 Query: 291 GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 GDIL F + ER+IRD + + K R E+ PL+ RLSN+EQ+RVF HSGRRIVLATN+ Sbjct: 299 GDILCFFASERDIRDAMELIEKQRWRGVEVTPLFGRLSNAEQHRVFSPHSGRRIVLATNI 358 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGI YV+D G ARISRYS RTKVQRLPIE ISQASANQR GR GR+++GI IR Sbjct: 359 AETSLTVPGIHYVVDTGLARISRYSTRTKVQRLPIEEISQASANQRSGRSGRIADGIAIR 418 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYSED+F +RPEFTDPEILRTNLASVILQMT L LGDIA FPFV+ PDK+ ++DG+ LL Sbjct: 419 LYSEDNFHARPEFTDPEILRTNLASVILQMTNLRLGDIAEFPFVQPPDKKAVRDGLMLLH 478 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 ELGAIT E LT +GR ++++PVDPR+ARM++EA + G + + +I ++++IQD Sbjct: 479 ELGAITDKEDQDMPVLTGIGRDIARIPVDPRMARMLVEAHRLGVLDDVTVIVASMTIQDV 538 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP++ Q +D+ H RF DK SDFLA +NLW+YL + + LS NAFR+ + +YL+Y+R Sbjct: 539 RERPLEFQAQADQAHARFKDKTSDFLAALNLWDYLKDSRNELSGNAFRKRMKKEYLHYMR 598 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEY---------REIHIALLTGLLSHIGMKDADK 641 +REW D+ QLR+ ++LG + + + IH ALLTGLLS+IG +D Sbjct: 599 IREWFDLVRQLREAERQLGWARTATATDDHDDSRDRDPKSIHQALLTGLLSNIGARDGTS 658 Query: 642 QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 +E+ GAR RF IFPGS L KKPP++VM AELVETSRLW R A IDP WVE VA L+K Sbjct: 659 KEFKGARGTRFMIFPGSVLAKKPPEFVMAAELVETSRLWARDVAAIDPAWVEKVAGGLLK 718 Query: 702 RTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQT 761 YSEP W + A M +K +YG+ +VA R V Y ++D R +FIRHAL++G+W Sbjct: 719 HNYSEPIWSIKRAAPMVHQKSMLYGVTVVADRLVPYHRVDMDAARTMFIRHALIDGEWNA 778 Query: 762 RHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVS 821 HAF + N KL E ++E K RRR ++VD+E LF+FYD+R+ ++ + RHFD+WWKK Sbjct: 779 HHAFLKHNAKLLEEAAKVEEKVRRRGLVVDEEALFDFYDERLPDNIGTGRHFDAWWKKKK 838 Query: 822 RETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLP 881 E L+F+ S LI + S+ +P+ QG++ L Y+FEPG DGVTV +P+P Sbjct: 839 HEDAAFLDFDPSALIDDSDADTSEDSFPDKIRQGSIDYDLQYKFEPGDPFDGVTVLVPVP 898 Query: 882 LLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLD 941 LL +EE F+W +PGLR ELV LI+SLPK +R+ VPAP +A L ++ P E PL + Sbjct: 899 LLAGLEEREFDWLVPGLREELVTELIRSLPKALRKTVVPAPEFAARALDKLVPYESPLNE 958 Query: 942 SLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQ 1001 L LR + G ++ D+ + +P HLKITF +D K K SL LK G++ Sbjct: 959 QLAEVLRSLGGHGINASDFRPEALPPHLKITFASIDRKGKITDHDTSLAALKKRRAGQIT 1018 Query: 1002 ETLSAVADDGIEQSGLHIW---SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDN 1058 +++ A E + W + G +PE+ K V A+PAL D V +K+F Sbjct: 1019 SSVAK-ATKKAESDSVTKWTEDTLGDVPETVTTKIEGNNVDAFPALEATNDGVRVKVFPT 1077 Query: 1059 PLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVD 1118 Q+M +L+ I + + + LP + ++ + P+G L++D + Sbjct: 1078 KAAADQSMVTATLAMLMRQIDVSVSQMVKGLPLRQRVAVDKYPHGGAAGLVEDARVAAIR 1137 Query: 1119 KLIDANGGPVWTEEGFAALHEKVRAELNDTVVD----IAKQVEQILTAVFNINKRLKGRV 1174 L+ A+GGPV T F AL KV+ E+ V IA V + + + Sbjct: 1138 DLMFAHGGPVRTPAEFDALLNKVKPEVAGMVRRTVVGIAGGVVEYINTAAELQN------ 1191 Query: 1175 DMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQM 1234 + DI+ QM L+ + +T +G + L RY+ AI+ RLE++ DP RD + Sbjct: 1192 --WDGPAIDDIRQQMNFLLPKNAITVHGMENLQHLPRYMSAIQIRLEEMNRDPDRDADRQ 1249 Query: 1235 LKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQA 1294 V++V++ + +LP A R+ VK+I W I+ELRVS FAQ+LGT P+S +RI + Sbjct: 1250 SVVDDVKKYLDAKLARLPQAARKSRAVKDILWRIQELRVSLFAQRLGTAKPVSPRRIEKM 1309 Query: 1295 MEQI 1298 ++++ Sbjct: 1310 VDKL 1313 >UniRef50_D2S4R8 ATP-dependent helicase HrpA n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S4R8_9ACTO Length = 1333 Score = 1470 bits (3805), Expect = 0.0, Method: Composition-based stats. Identities = 693/1339 (51%), Positives = 907/1339 (67%), Gaps = 53/1339 (3%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 L+ RL L L D R RRL G +K ++ +A+ +A ++ A ++ R A Sbjct: 3 TPPDDLRARLAGLTLEDEHRLRRRLDGTRKTRDAEARARQRARIAADVAAAEERIARRRA 62 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 A P + YP LPVS ++ DI A+R+HQVV+VAGETGSGKTTQLPKI +ELGRG+ G IG Sbjct: 63 AVPTVRYPAELPVSARRDDIAAALREHQVVVVAGETGSGKTTQLPKIALELGRGVTGRIG 122 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AARTVA RIAEEL+T G +G+KVRF+D V D+T+VK+MTDG+LLAEI +DR Sbjct: 123 HTQPRRIAARTVAERIAEELETPLGEVVGWKVRFTDQVGDSTLVKVMTDGVLLAEIGRDR 182 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--- 243 LL QYDT+IIDEAHERSLN+DFLLGYL LLPRRPDLK++ITSATID +R ++HF Sbjct: 183 LLRQYDTLIIDEAHERSLNVDFLLGYLARLLPRRPDLKLVITSATIDVDRIAKHFTGLGE 242 Query: 244 -------------------APIIEVSGRTYPVEVRY---RPIVEEADDTERDQLQAIFDA 281 P++EVSGRTYPVEVRY + D +RDQ+ AI DA Sbjct: 243 KGQSAGLGDDGHGSADGAEVPVVEVSGRTYPVEVRYRPVVDPDDPDADPDRDQVTAIADA 302 Query: 282 VDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG 341 V+EL+ E GD+L+F++GEREIRDTAD L + E+LPLY+RLS ++Q+RVF H+G Sbjct: 303 VEELAAEGPGDVLVFLAGEREIRDTADVLTER-FPSVEVLPLYSRLSAADQHRVFAPHTG 361 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 RR+VLATNVAETSLTVPGI+YV+DPGTARISRYS R KVQRLPIEPISQASA QR GRCG Sbjct: 362 RRVVLATNVAETSLTVPGIRYVVDPGTARISRYSSRLKVQRLPIEPISQASARQRSGRCG 421 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 R SEGI IRLY+E+D+ RPE+TDPEILRT+LASV+LQM AL LGD+A FPF++ PD+R Sbjct: 422 RTSEGIAIRLYTEEDYEGRPEYTDPEILRTSLASVLLQMAALELGDVADFPFIDPPDRRA 481 Query: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 + DGV LLEELGA+ D LTP GR L+ LP+DPR+ARMV+EA + G + E ++I Sbjct: 482 VADGVALLEELGALGEDG-----GLTPTGRALATLPLDPRMARMVVEADRRGVLEEVLVI 536 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 + L+IQDPRERP + QQA+D H RF D+ SDFLA +NLW Y+ EQQ+ALS + FRR Sbjct: 537 AAGLTIQDPRERPSEHQQAADTAHARFADENSDFLALLNLWRYVTEQQEALSGSQFRRTL 596 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE--IHIALLTGLLSHIGMKDA 639 + ++L+YLR+REWQD+Y QLR + LG+ E E +H ALL GLLSH+G++ Sbjct: 597 KREFLHYLRIREWQDLYGQLRSTARRLGMTTGELATEPDERGVHTALLAGLLSHVGLQVE 656 Query: 640 D-----------KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688 + +EY GARNARF + PG+ L KKPP+WV+ AELVETSRL+ R ARID Sbjct: 657 EGKGRDGDRRRGGREYLGARNARFVLAPGTPLAKKPPRWVVAAELVETSRLFARTVARID 716 Query: 689 PEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCREL 748 PE VE +A+HL+KR YSEP W+ +G+V+ATE+VT+YG+P+V R+V Y IDP + REL Sbjct: 717 PEVVERLAEHLVKRQYSEPRWDAKRGSVVATERVTLYGIPLVVGRRVQYGSIDPVVSREL 776 Query: 749 FIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVI 808 FIRHALVEG+W T H F+ +N K V ELE ++RRRDI VDDETLFE YD RI DV+ Sbjct: 777 FIRHALVEGEWTTHHRFWHDNQKAMQRVAELEERARRRDIRVDDETLFELYDARIPADVV 836 Query: 809 SARHFDSWWKKVSRETPDLLNFEKSMLIKEGAE-KISKLDYPNFWHQG-NLKLRLSYQFE 866 S RHFD WWK R TPDLL F ML A ++ D+P+ L L LSY F Sbjct: 837 STRHFDRWWKAARRGTPDLLTFTPEMLTNAAAAGQVRVEDFPDEVPLSQGLTLPLSYAFA 896 Query: 867 PGADADGVTVHIPLPLLNQV----EESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAP 922 PGA DGVTV +PL +L+ V + +PGLR ELV AL+++LPK +RR VP P Sbjct: 897 PGAPQDGVTVDVPLAVLDTVAERTSGESLAFTVPGLREELVTALLRTLPKQLRRALVPIP 956 Query: 923 NYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKK 982 + L R+ P E PLL +LERELRR GV V + W DQVPDHL+ TFRVVDD+++ Sbjct: 957 DRVREVLPRIAPNE-PLLPALERELRRAAGVVVPPDAWAPDQVPDHLRATFRVVDDRHRP 1015 Query: 983 LKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWP 1042 L G+ LQ L+ + + + +L+A A D +E++G W+FG LP + E +RG + V A P Sbjct: 1016 LATGKDLQALRREVAPQSRASLAAAASD-VERTGQTAWTFGTLPRTVEVRRGGHVVTAHP 1074 Query: 1043 ALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPY 1102 ALVDE +V +++ +E + W G RRLL+L SP + + + L K++L L FNP Sbjct: 1075 ALVDEGTTVGVRVVATEVEATRLTWRGARRLLVLVAGSPARQVVKSLSPKSRLALQFNPD 1134 Query: 1103 GKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTA 1162 G++ L+DDC+ D+L+ A GGP E FAAL + RA+L D ++VE +L Sbjct: 1135 GEIPALVDDCVDAAADELLAAAGGPPRNEAAFAALVQTARAQLLPLTTDTVRRVEAVLVQ 1194 Query: 1163 VFNINKRLKGRVDMTMAL-GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLE 1221 + + + ++D++ QMGGL++RGFV G +RL D +RYL+ + RLE Sbjct: 1195 AREVAVAIGAAPGRRVPEAAVADLRRQMGGLLHRGFVAAAGRRRLPDLVRYLRGMVHRLE 1254 Query: 1222 KLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLG 1281 KL + RD M +V V ++Q ++P D+ V +RWM+EELRVS FAQ +G Sbjct: 1255 KLPANAVRDELWMQQVAAVSAEYEQLRAQVPSTGAPDDPVARVRWMLEELRVSLFAQTVG 1314 Query: 1282 TPYPISDKRILQAMEQISG 1300 TP P+S++R+ +A++ ++ Sbjct: 1315 TPRPVSEQRVYKAIDALTA 1333 >UniRef50_Q3SHC5 ATP-dependent helicase HrpA n=3 Tax=Betaproteobacteria RepID=Q3SHC5_THIDA Length = 1275 Score = 1470 bits (3805), Expect = 0.0, Method: Composition-based stats. Identities = 574/1263 (45%), Positives = 782/1263 (61%), Gaps = 45/1263 (3%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ITYPD LPV+ ++ DIL A+ H+V+I+ GETGSGKTTQ+PK+C+E G LIG TQ Sbjct: 19 RITYPD-LPVAARRDDILAALERHRVLILCGETGSGKTTQIPKMCLEAGIPPGKLIGCTQ 77 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AAR+VA RIA+EL +E GG +GYKVRFSD V +T +K+MTDGILLAE Q D LL Sbjct: 78 PRRIAARSVAARIAQELGSELGGLVGYKVRFSDKVRPDTAIKVMTDGILLAESQGDPLLS 137 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YDTII+DEAHERSLNIDFLLGYLK LL +R DL++++TSATID ERFS+HF++AP+IEV Sbjct: 138 RYDTIILDEAHERSLNIDFLLGYLKTLLDKRADLRVLVTSATIDAERFSKHFDDAPVIEV 197 Query: 250 SGRTYPVEVRYRPIVEEADD-----------------TERDQLQAIFDAVDELSQESHGD 292 SGR YPVE+R+RPI + + DQ+ AI DA DEL++ GD Sbjct: 198 SGRLYPVEIRWRPIARDDEAGAPGNKREAEKPGRTYKDGPDQIAAILDATDELARLGPGD 257 Query: 293 ILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVA 351 IL+F+ GEREIRDTA+AL K + TEILPL++RLS +EQ+ +F+ S RRIVLATNVA Sbjct: 258 ILVFLPGEREIRDTAEALRKHHPPGTEILPLFSRLSVAEQDAIFKPTSALRRIVLATNVA 317 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLTVPGI+YVIDPGTAR+ RYS R KV++L IE +SQASANQR GRCGRV++G+CIRL Sbjct: 318 ETSLTVPGIRYVIDPGTARVKRYSARNKVEQLLIEKVSQASANQRAGRCGRVADGVCIRL 377 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 Y E DF +RP FTDPE+LR++LA VIL+M +LGLGD+ FPF++ P R + DG +LL E Sbjct: 378 YDEADFSNRPRFTDPELLRSSLAGVILRMKSLGLGDVVGFPFIDPPSSRLVTDGYQLLGE 437 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 L A+ Q LT +GRQL++LP+DPR+ARM+L A++ CVRE +II SALS+QDPR Sbjct: 438 LHALDEQGQ-----LTKIGRQLAKLPLDPRIARMLLAAEQQRCVREILIIASALSVQDPR 492 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLR 590 +RPM++ QA+DEKH+ F D+ SDF+ ++ LW + EQ Q ++ + L + +L+ R Sbjct: 493 DRPMERAQAADEKHKLFQDERSDFMGWLRLWRWYEEQVQHKKTNRQLQTLLQDHFLSPRR 552 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADK--------- 641 +REW+DI+ QL V ELG+ N + A Y IH ALL+GLL +IG K D Sbjct: 553 MREWRDIHGQLHAQVAELGLRENEKDAGYDAIHQALLSGLLGNIGFKSDDGRAKTGAGRP 612 Query: 642 ----QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 Y GAR + SI PGS L KK PKW+M AEL +T RL R A + PEW+E + Sbjct: 613 KPGEGNYLGARGIKLSIHPGSALAKKGPKWIMAAELTDTGRLLARTVAEVRPEWIEGAGR 672 Query: 698 HLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEG 757 HL+ R Y EPHWE+ V+A E+V++YG+ +V RK++Y IDP L RELFIR ALV G Sbjct: 673 HLLTRMYIEPHWEKDGARVVAWERVSLYGITLVPRRKIHYGPIDPELARELFIRGALVAG 732 Query: 758 DWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWW 817 D+ TR +F N L E+E+LEHK+R+ + +D+ ++ +D R+ + + F+ W Sbjct: 733 DYDTRAPWFAHNRALIQEIEDLEHKARKSGVWLDEARIYGIFDARVPAGIHNGVAFEKWR 792 Query: 818 KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVH 877 + P L + ++ EG L +P + L Y+FEPG DGVT+ Sbjct: 793 AEAEAADPRTLFLRREDILGEGLGADHTL-FPESMQVDGVMCALKYRFEPGHPLDGVTLR 851 Query: 878 IPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL 937 +PL LLN++E +W +PGL RE + AL+K LPK RR +P P+ AFL +P E Sbjct: 852 VPLYLLNRIEAPQIDWLVPGLIREKLTALLKFLPKDKRRPLIPLPDTVTAFLSSAQPGER 911 Query: 938 PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALK 997 L ++L +R+ TG + +DW + +P HLK+ VVDD ++L GR L L+ L Sbjct: 912 VLTEALAAFVRKKTGADIHPDDWRGE-LPAHLKMNLCVVDDSGQELASGRDLGALRQQLG 970 Query: 998 GKVQETL-SAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 G + T AD E++GL W FG LPE + KRG ++ +PALVD SV ++L Sbjct: 971 GAARITYGGGAADSEFERTGLLEWDFGDLPEQVKFKRGGRELTGYPALVDTGTSVDLRLI 1030 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 D + G+ RLL L + + K L + L + L L F G L + Sbjct: 1031 DTAEAARGETRRGVIRLLRLALAAQFKQLDKDLGRETALALKFRTLGSPETLRAHLLDAI 1090 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 + + + + FA E+ + + + + V +IL + RL + Sbjct: 1091 AARALLGDDETPRDAKAFARQKERAKPRVAVVKQALLRDVAEILDLHAQVAARLAAK--P 1148 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 + D A + LV F+T + RL D RYL+ I KRLEKL RD M Sbjct: 1149 QFTAVMRDETAHLAALVPSDFITATPWPRLKDLPRYLRGILKRLEKLPAAEQRDARAMAG 1208 Query: 1237 VENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 V +Q +Q ++ + + RW +EELRVS FAQ+L TPYP+S KR+ + + Sbjct: 1209 VLTLQNKYQARRAQVR--GELPAALDDFRWQLEELRVSLFAQELKTPYPVSVKRLDKVWD 1266 Query: 1297 QIS 1299 ++ Sbjct: 1267 TLA 1269 >UniRef50_B2JJC7 ATP-dependent helicase HrpA n=89 Tax=cellular organisms RepID=B2JJC7_BURP8 Length = 1462 Score = 1467 bits (3799), Expect = 0.0, Method: Composition-based stats. Identities = 599/1361 (44%), Positives = 830/1361 (60%), Gaps = 100/1361 (7%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 ++ + + + A A Q +V+ P IT+P+ LPVS ++++I Sbjct: 112 RQQTRPEDRARAGNQSGADKPRNAPREPQKPARVVEPNPI-PPITFPEALPVSGRREEIA 170 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG----HTQPRRLAARTVANRIA 143 AI HQVVIV+GETGSGKTTQLPKIC+ LGRG+ G HTQPRR+AA RIA Sbjct: 171 RAIEGHQVVIVSGETGSGKTTQLPKICLALGRGLGAGGGGLIGHTQPRRIAASATGRRIA 230 Query: 144 EELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERS 203 EEL T G +GYKVRF+D++S VKLMTDGILLAE Q D LL YDT+IIDEAHERS Sbjct: 231 EELGTPFGEVVGYKVRFTDNLSPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERS 290 Query: 204 LNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----NAPIIEVSGRTYPVEVR 259 LNIDFLLGYLKE+LP+RPDLK+I+TSATID +RF+RHF AP+IEVSGR YPVEVR Sbjct: 291 LNIDFLLGYLKEILPKRPDLKLIVTSATIDADRFARHFGSEEKPAPVIEVSGRLYPVEVR 350 Query: 260 YRPIVEEA----------------------DDTERDQLQAIFDAVDELSQESHGDILIFM 297 YRP+ +++ +T+RD + AI +A DEL +E GD+L+F+ Sbjct: 351 YRPVADDSPAVKAAEGNSGREHRPDRPKTQRETDRDLMDAIVEAADELCREGPGDVLVFL 410 Query: 298 SGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTV 357 GEREIRD A+AL K + HTEILPL+ARLS +EQ RVF+ + RRIVLATNVAETSLTV Sbjct: 411 PGEREIRDAAEALRKHHPPHTEILPLFARLSAAEQERVFRPSNARRIVLATNVAETSLTV 470 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI+YVID G AR+ RYSYR KV++L +E ISQA+ANQR GRCGRV++GICIRLY E DF Sbjct: 471 PGIRYVIDTGLARVKRYSYRNKVEQLQVEAISQAAANQRAGRCGRVADGICIRLYEEADF 530 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 +R FTDPEILR++LA+VIL+M +L L I FPF+E P R I DG +LL ELGA+ Sbjct: 531 QARVRFTDPEILRSSLAAVILRMKSLHLTAIETFPFIEPPPGRAIADGYQLLNELGAVDD 590 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 D LTPLGR+L++LP+DPR+ RM+L A+ +RE +II SALS+QDPR+RP+D Sbjct: 591 DN-----ALTPLGRELARLPLDPRVGRMILAARDQLALREVLIIASALSVQDPRDRPIDA 645 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVREWQD 596 Q+ +D+ HR+F D+ S+FL ++ +W + E S+ CR ++L++LR+REW+D Sbjct: 646 QEQADQAHRKFADERSEFLQWLKIWTWFEEAVAHKKSNRQLTDACRQNFLSHLRLREWRD 705 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 +++QL VV+E G +N A + +IH+ALLTGLL +IG+K D+ Y GAR +F ++P Sbjct: 706 VHSQLLTVVREHGWRLNESEATFEQIHLALLTGLLGNIGLKADDEPYYLGARGIKFYLWP 765 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GS L KK KWVM AEL+ETSRL+ R A+I+PEWVE V HL+K++ SEPHWE+ V Sbjct: 766 GSALVKKAGKWVMAAELIETSRLYARCIAKIEPEWVERVGAHLLKKSLSEPHWEKRAAQV 825 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 A E+ +YGLP+ R+V++ + DPA RELFIR ALVEG++ T+ AFF N KL A++ Sbjct: 826 TAFERAMLYGLPVYHRRRVSFGKQDPARARELFIRGALVEGEFDTKLAFFAHNRKLLADI 885 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRET------PDLLNF 830 E+LEHKSRR+D+LVDDE ++ FYDQ I + + + F+ W++ +++ LL Sbjct: 886 EQLEHKSRRQDVLVDDELIYAFYDQAIPNGIHTGAAFERWYRDEVKKSGQQEDKLRLLYL 945 Query: 831 EKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESG 890 + L++ A ++ +P + + L+Y FEPG+ DGVT+ +PL LNQV+ Sbjct: 946 SRDDLMRHEAAGVTTDLFPKRMTMAGVDMALTYHFEPGSPRDGVTLAVPLYALNQVDTRR 1005 Query: 891 FEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV---KPLELPLLDSLEREL 947 EW +PG+ RE L+KSLP+ +RR+ VP P YA F+ R LLD++ ++ Sbjct: 1006 VEWLVPGMLREKTQLLLKSLPQKLRRHVVPLPEYAAGFVERHSGPPFGAGGLLDTVIADV 1065 Query: 948 RRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV 1007 R T V + D+ + + HL + F+V+D+ ++L GR+L L+ L G+ Q+ + Sbjct: 1066 REQTQVATKQSDYKLETLAPHLFMNFKVIDEHGRQLAMGRNLAQLRAELGGQAQQQFQKI 1125 Query: 1008 ADDGIEQ-------------------------------------------------SGLH 1018 A L Sbjct: 1126 ATSAAGAALANVGSGGDASARAAASGAAAGAGRGASAAPRTPTAGEAAAAPATALYENLT 1185 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 W+FG+LPE E +RG + +PALVD +++FD+P E + GLRRL L + Sbjct: 1186 TWNFGKLPELLEIRRGGQTLFGYPALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQL 1245 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALH 1138 PIKYL + LP ++ + F P G EL D I +D+ P + F A Sbjct: 1246 REPIKYLEKNLPGLREMAMQFMPRGTQEELRDQLIDTALDRACLQEPLPD-DDASFHARK 1304 Query: 1139 EKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFV 1198 ++ R+ L +IA+ V QIL + K+L A +D+ AQ+ L+ + FV Sbjct: 1305 DEGRSRLTLLAQEIARLVGQILGEYSAVLKKLAQ--AKPFAAAYADMHAQLDALIGKRFV 1362 Query: 1199 TGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRED 1258 + +L RYL+ I R++KL DP RD Q +++ + Q +Q+ + + D Sbjct: 1363 VDTPYAQLSHFPRYLKGIALRIDKLKADPARDARQFAELQPLAQHYQRALGQR--GGVPD 1420 Query: 1259 EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + E RW++EELRVS FAQ+L TP P+S KR+ + E + Sbjct: 1421 VRLAEFRWLLEELRVSLFAQELRTPMPVSVKRLYKVWESMQ 1461 >UniRef50_C0VVM1 HrpA family ATP-dependent helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVM1_9CORY Length = 1344 Score = 1458 bits (3774), Expect = 0.0, Method: Composition-based stats. Identities = 619/1349 (45%), Positives = 848/1349 (62%), Gaps = 67/1349 (4%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + +L RL S+ ++D RF RL + + + K++ A ++ Sbjct: 8 SSTSKKSLYARLASVRIQDERRFRARLKKAR-------TDRALEAIKKDLTHAEKRIAGV 60 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 + P +TYP LPVS++ DI AIRD+QVVI+AGETGSGKTTQ+PKIC+E+GRG +G+ Sbjct: 61 TSRIPTVTYPPELPVSRRVDDIAAAIRDNQVVIIAGETGSGKTTQIPKICLEIGRGRRGM 120 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRRLAARTVA RIAEE+ G +GY +RF D V +T VK+MTDGILLAE+Q+ Sbjct: 121 IGHTQPRRLAARTVAERIAEEVGQNIGESVGYAIRFDDKVGPHTAVKIMTDGILLAEMQR 180 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN- 243 DR L YDTIIIDEAHERSLNIDF+LGYLK LLP+RPDLK+IITSATIDPERF+RHF + Sbjct: 181 DRFLNAYDTIIIDEAHERSLNIDFILGYLKRLLPKRPDLKVIITSATIDPERFARHFADR 240 Query: 244 ----APIIEVSGRTYPVEVRYRPIVEEADDTE--RDQLQAIFDAVDELSQESHGDILIFM 297 APIIEVSGRTYPVE+RYRP+VE D E D+L + A++EL QE GDIL F Sbjct: 241 SGRPAPIIEVSGRTYPVEIRYRPLVEIHGDKEVAIDELDGLLAALEELMQEGPGDILCFF 300 Query: 298 SGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTV 357 +GER+IRD DA++ ++ E+ PL+ RLSN+EQ+RVF H GRRIVLATN+AETSLTV Sbjct: 301 AGERDIRDALDAISARKFKNVEVTPLFGRLSNAEQHRVFSPHRGRRIVLATNIAETSLTV 360 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI YV+D G ARISRYS RTKVQRLPIEPISQASANQR GRCGRV+ GI IRLYSE+DF Sbjct: 361 PGIHYVVDTGLARISRYSNRTKVQRLPIEPISQASANQRSGRCGRVANGIAIRLYSEEDF 420 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 SRPEFTDPEI RTNLASVILQM L LGDI FPFV+APD+++I++G++LL ELGAI Sbjct: 421 ASRPEFTDPEIHRTNLASVILQMALLRLGDIRNFPFVQAPDEKSIRNGIQLLLELGAINE 480 Query: 478 DEQAS-AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + + +LT +GRQ++++PVDPRLARM++EA+K + II +AL++QD RERP+D Sbjct: 481 QKPGDESPRLTAVGRQIARIPVDPRLARMLIEAEKMHVLAPVTIIVAALTLQDVRERPLD 540 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 KQQ +D+ H RF DK SD + ++ LW YL + LS N FR+ + +YL+Y+R REW+D Sbjct: 541 KQQQADQMHSRFKDKGSDLMGYLALWAYLCSLRSRLSGNQFRKRLQREYLHYMRSREWRD 600 Query: 597 IYTQLRQVVKELGIPVNSEP---------------------------------------- 616 + QL V ++L V++ Sbjct: 601 LIRQLVSVYEDLYWNVDTNALWCEDIPDLTAPPNLGCGEGSQQSKKAAAGAAPLSPVDAA 660 Query: 617 ----AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAE 672 + IH ALL+GLLSHIG++ D +E++GAR F IFPGSGL KKPP+++M AE Sbjct: 661 HAYFTDSDSIHKALLSGLLSHIGVRKGDSKEFSGARGTSFLIFPGSGLAKKPPEFIMAAE 720 Query: 673 LVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAA 732 LV+TSRLW R A I+PEWVE +A HL+KRTYSEP W + + A M EK VYG+PI+A Sbjct: 721 LVDTSRLWARGVAAINPEWVEGLAPHLLKRTYSEPTWSKKRSAAMVHEKTLVYGVPIIAD 780 Query: 733 RKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDD 792 R V Y +D R++FIRHALV+G+W T H FF EN +V +LE K+RRRDI VDD Sbjct: 781 RLVQYGAVDEEAARDMFIRHALVQGEWITHHRFFHENQDKLEQVRDLEEKARRRDITVDD 840 Query: 793 ETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFW 852 +TLF FYD+ + + S F+ WWK+ +++P LL+F+ LI A+ +++ +P+ W Sbjct: 841 DTLFAFYDRILPSHITSEIRFNHWWKRRKQKSPHLLDFDMDKLINPEADTVAEESFPDAW 900 Query: 853 HQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPK 912 QG+L+ LSY FEPG+ DGVTV IPLPLL V+ F WQ+ GLR ELV LI+ LPK Sbjct: 901 RQGSLEFELSYHFEPGSPFDGVTVRIPLPLLATVDPEPFTWQVHGLRLELVTELIRCLPK 960 Query: 913 PVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT 972 RR VPAP+YA L R+ P E L++ L R + ++ D++ +P H+++T Sbjct: 961 QYRRLLVPAPDYAAKVLPRLIPYEGTLVEQLTSIFRSLGLRNLEETDFNLGSLPPHVQVT 1020 Query: 973 FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWS---FGQLPESY 1029 F VD + + L+ L++ G+++ ++ A + W+ G +PE+ Sbjct: 1021 FAAVDKQGTITDSDKDLRALQNRRSGQIRSSIGKAARSSSSSL-VQSWTKENLGDVPETV 1079 Query: 1030 EQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKL 1089 + + V A+PALV ++ ++ + +M +L+ + K + + L Sbjct: 1080 DTEVDGQTVTAYPALVADQGGFKVQAMPTKAAAEASMVQATMTMLISAVTIGTKSMLKGL 1139 Query: 1090 PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTV 1149 P + ++ + P+G LI+D + L+ +GGPV + E F L KV+AE+ V Sbjct: 1140 PLQQRVAVENYPHGGADGLINDARIAAIRDLMLKHGGPVRSPEQFEELKTKVKAEVPSYV 1199 Query: 1150 VDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDT 1209 + L + + L + DI+ Q+ +V + V+ G +RL Sbjct: 1200 RQTVTALAPALYEYEALREEL----THWDGPAIDDIRKQLDIIVPKNAVSTFGIQRLTHL 1255 Query: 1210 LRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIE 1269 RY+QA RL+ L P +D + ++ + +N+LP + R + VK+I W+I+ Sbjct: 1256 QRYIQAARIRLDDLEAAPQKDEQRQDIIDRLAGQLSSKLNRLPKSARHSKKVKDIIWLIQ 1315 Query: 1270 ELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 ELRVS FAQ+LGT +S+K+I + + + Sbjct: 1316 ELRVSLFAQRLGTATKVSEKKISKQITAL 1344 >UniRef50_Q31H28 ATP-dependent helicase HrpA n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31H28_THICR Length = 1342 Score = 1456 bits (3771), Expect = 0.0, Method: Composition-based stats. Identities = 579/1331 (43%), Positives = 829/1331 (62%), Gaps = 55/1331 (4%) Query: 10 TALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKE---------IDQAAGK 60 +A+ + +D +++DR S+++ + + +A F+ + + + ++ Sbjct: 25 SAVIKAVDQALVKDRFFLSKQIQRFN--VHANTSEADFEALKNDQAWLKFCDRLAKSVAT 82 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V + A P+ITY DNLPV++++ +ILE I+++QVV++AGETGSGKTTQ+PKIC+E GRG Sbjct: 83 VQKNQQAVPKITY-DNLPVAERRDEILELIQNNQVVVIAGETGSGKTTQIPKICLEAGRG 141 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 + G IG TQPRRLAAR+VA RIAEEL + G +GY+VRF D V +++K+MTDGILLA Sbjct: 142 VFGRIGCTQPRRLAARSVAERIAEELGSSLGQLVGYQVRFHDQVHQQSLLKVMTDGILLA 201 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ D L QYDTIIIDEAHERS+NIDFLLG LK+LLP+R DLK+IITSATID ERF+ Sbjct: 202 EIQNDPYLNQYDTIIIDEAHERSINIDFLLGILKKLLPKRRDLKLIITSATIDTERFASF 261 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIV----EEADDTERDQLQAIFDAVDELSQ-ESHGDILI 295 F APIIEVSGRTYPVEVRY P+V +E ++ E+D AI A++ELS+ + GD+L+ Sbjct: 262 FEGAPIIEVSGRTYPVEVRYNPLVKIEDDEGNEFEQDIPTAIVYALEELSEIDPFGDVLV 321 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 F GER+I++TA+ L K NL++TEI+PLYARLS +EQN+VFQ+ RR++L+TNVAETSL Sbjct: 322 FQVGERDIKETAEVLRKQNLKNTEIVPLYARLSMAEQNKVFQTSQKRRVILSTNVAETSL 381 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGIK+VIDPG RISRYS R+KVQRLPIE ISQASANQR GRCGRVS G+CIRLY ED Sbjct: 382 TVPGIKFVIDPGLVRISRYSVRSKVQRLPIEKISQASANQRAGRCGRVSSGVCIRLYDED 441 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DF SRPEFT PEI RT+LA+VILQMT + LG + FPF+E P+ + I DG R L E+GA+ Sbjct: 442 DFKSRPEFTPPEIHRTSLATVILQMTQMKLGSVKHFPFIEPPEDKAINDGFRQLHEIGAL 501 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 +LT GR L++LP+DPR+A+MVLE QK+G + E +II +A+SIQDPR+ Sbjct: 502 DE-----KRRLTESGRHLAKLPLDPRMAKMVLEGQKNGVLAEVLIIAAAISIQDPRDMNE 556 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 +QA+++ H+ F D SDFL F+NLW + ++++ LS N R+LC+T++L+YLR++EW Sbjct: 557 SNRQAANQAHKVFEDPRSDFLFFLNLWRFYEDKRRHLSQNKLRKLCKTNFLSYLRMKEWH 616 Query: 596 DIYTQLRQVVKELGIPVNS-----------------EPAEYREIHIALLTGLLSHIGMKD 638 D++ QL +K + + V +H +L+ GLL +I M+D Sbjct: 617 DLFFQLEMSLKRISVKVGELHLYEEVKKGKTVTERLSDTHSMAVHRSLMAGLLGNIAMRD 676 Query: 639 ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 D+ Y GARN + I P S LFK+ PKW++ ELVET++L+ R A ID WVE +A H Sbjct: 677 -DENSYLGARNTKLFIHPSSVLFKRKPKWMLSGELVETTKLYARNNAIIDVNWVEAIAPH 735 Query: 699 LIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD 758 LIK +Y++PHW++ G V A E VT+YGLPIV R+ NY I+P R++F+RH LVEG+ Sbjct: 736 LIKHSYTDPHWQKKAGQVGAFESVTLYGLPIVNRRRCNYGPINPKEARKIFLRHGLVEGE 795 Query: 759 WQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWK 818 ++ AFF N K+ AE+ +E K RR D LV+++ L++FY + I + S F+ W + Sbjct: 796 LNSKVAFFVHNQKMIAEIHHIESKLRRPDFLVEEDVLYDFYAKHIPEHIYSLPAFEKWVR 855 Query: 819 KVSRETP---DLLNFEKSMLIKEGAEKISKLDYPNFWHQ-GNLKLRLSYQFEPGADADGV 874 K + P L + L+K+ + ++YP+ L L + Y FEPG DG+ Sbjct: 856 KTEKTDPEALKALYLTQEFLLKQSYDSRLDVEYPDQVQIKNQLDLDVDYFFEPGKAQDGM 915 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP 934 V +PL LN V+ FEW PGL +E IK+LPK +R+ F+PAPN AE L + P Sbjct: 916 VVKVPLSALNLVQAEDFEWLTPGLLKEKTAFYIKALPKQLRKQFIPAPNTAELVLKEMAP 975 Query: 935 ------LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRS 988 + + L L R V D+ ++P++L+ F + DDK KK+ E Sbjct: 976 NKKLDGRKANYVTQLVWALNRRAQQKVTSHDFEAVELPEYLEPYFVLQDDKGKKIAEKAD 1035 Query: 989 LQDLKDALKGKVQETLSAVADDGI-EQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDE 1047 L+ LK + V + + E + W FG L +S + ++ A+PAL Sbjct: 1036 LEALKTEYQHLVDARIQKHQSKKMPENRIIESWDFGDLADSQTIRSQGIEMVAYPALQVS 1095 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 D++ + L + + + L+ + KYL +KLP K L + PYG E Sbjct: 1096 GDTIELALLGDEDSAQAHHAEAVLALIKKELVEKEKYLQKKLP-MQKACLCYAPYGTCQE 1154 Query: 1108 LIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNIN 1167 L I + +L+ + + + F A+ E R++ + IA QV ILTA I Sbjct: 1155 LTQQVIDRALFQLV-PHPEKIRKQTEFEAILETARSKWIEQAQQIASQVNTILTAHQKIA 1213 Query: 1168 KRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDP 1227 K++KG V+ ++DI+ Q+ L+ + FV + RYLQ +EKRL K+ VDP Sbjct: 1214 KQVKGNVNPRWLASVADIRTQLDQLISKDFVRVTPEEWFKQLPRYLQGLEKRLAKIDVDP 1273 Query: 1228 HRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 +D+ + +++ + A++ + PA + + EIRW+IEELR+S FAQ + T P+S Sbjct: 1274 SKDQKAIREIQPILDAFETLAKE--PAYQNHSGLVEIRWLIEELRLSLFAQPMKTLKPVS 1331 Query: 1288 DKRILQAMEQI 1298 +R+ + ++ + Sbjct: 1332 IQRLQKKLKTL 1342 >UniRef50_Q1YSZ9 ATP-dependent helicase HrpA n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=Q1YSZ9_9GAMM Length = 1309 Score = 1454 bits (3764), Expect = 0.0, Method: Composition-based stats. Identities = 585/1300 (45%), Positives = 835/1300 (64%), Gaps = 16/1300 (1%) Query: 3 EQQKLTFTALQQRLDS-LMLRDRLRFSRRLHGVKKV-KNPDAQQAIFQEMAKEIDQAAGK 60 + F LQ +D RD R SR+L + + K + +Q+ + + Sbjct: 10 PSGQQDFQRLQLLVDETASTRDCFRLSRQLRDLSQQYKRGLDISSGWQQWHSALLKTQAL 69 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 R P +YP+ LPVS + +I E + HQV++VAGETGSGKTTQ+PKIC++ GRG Sbjct: 70 THSRRQTIPAFSYPE-LPVSARADEIAELLTKHQVIVVAGETGSGKTTQIPKICLQAGRG 128 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 ++GLIGHTQPRR+AARTVA RIAEELK G +GY+VRFSD + N+++KLMTDGILLA Sbjct: 129 VRGLIGHTQPRRIAARTVATRIAEELKVNIGEAVGYQVRFSDQSAPNSLIKLMTDGILLA 188 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ+DR L YDTIIIDEAHERSLNIDFLLGYLK LLP+RPDLKIIITSATID ++FS+H Sbjct: 189 EIQRDRFLSAYDTIIIDEAHERSLNIDFLLGYLKNLLPQRPDLKIIITSATIDVDKFSKH 248 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILIFMSG 299 FN+AP++EVSGR++PV+V Y DD E D+ Q I D + ++ GD+LIF+SG Sbjct: 249 FNDAPVVEVSGRSFPVDVIYN----HPDDLEADRDQMIVDCLQDIHHNQKAGDVLIFLSG 304 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 EREIR+ A+ + L HTE++PLYARLS +EQ+++F H GRRIVL+TNVAETSLTVPG Sbjct: 305 EREIREVNLAIKRAQLPHTEVVPLYARLSLAEQSKIFSPHRGRRIVLSTNVAETSLTVPG 364 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I+YVID G AR+SRYS+RTKVQRLPIE ISQASANQR GRCGR+++G+C RLYSE+DF Sbjct: 365 IRYVIDTGRARVSRYSFRTKVQRLPIEAISQASANQRAGRCGRIADGVCYRLYSEEDFEG 424 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 RP FTDPEI+RTNLA+VILQM L +GDI FPFV+ PD R I DG +LLEEL A+T D Sbjct: 425 RPAFTDPEIVRTNLAAVILQMLQLRIGDIRNFPFVDPPDSRMISDGFKLLEELQAVTEDG 484 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 KL+ LG++L +P+DPR ARM+LE+ K+GC+ E MIIT+ LSIQDPRERP DKQQ Sbjct: 485 -----KLSNLGKRLVNIPLDPRFARMLLESAKNGCLAEVMIITTGLSIQDPRERPADKQQ 539 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 A+D+ H+++ + SDF++ +NLW + EQ++ LS N + R C+ ++++YLR+REW+D++ Sbjct: 540 AADQSHKKWQEPNSDFVSLLNLWRHFEEQRQQLSGNQYSRYCKRNHVSYLRMREWRDLHH 599 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 Q+ + L + N+EPAE IH ++L+GLL +G+ DK EY G RN +F IFPGSG Sbjct: 600 QVHTACRGLKLTANTEPAEQDAIHRSILSGLLGQVGILQ-DKWEYLGTRNRKFFIFPGSG 658 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 L KKPPKW+M L+ET++ + A+ID +W+EP+A HL+K++YSEP + + G VMA Sbjct: 659 LSKKPPKWLMAGSLMETTKQFALTVAKIDSDWLEPLAAHLVKKSYSEPFYNKKSGQVMAK 718 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 E+ T++GL IV + Y Q+ P R +FI+ ALVE ++ + F+R N KL AE++ L Sbjct: 719 ERQTLFGLSIVENKNRVYGQVAPQEARNVFIQQALVEEGYRGKGEFYRRNHKLVAELQAL 778 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E + RRRD+LV+ + +F+FYDQ + + + F+ W K+ +TP LL +K L+ G Sbjct: 779 EDRFRRRDLLVEQQAIFDFYDQLVPEGIYNLTAFEKWRKQAEAKTPKLLLLDKEYLLLRG 838 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 + + +P + +L Y F+PG DGV+ +PL LL+Q+ FEW +PG+ Sbjct: 839 LSQDEQAQFPETISCDGIPYQLRYHFQPGHAEDGVSALVPLALLHQLPRYFFEWLVPGML 898 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRED 959 R+ IALIKSLPK RR+FVP P++ + FL + K + PL + L LR ++GV ++ E Sbjct: 899 RDKCIALIKSLPKQTRRHFVPVPDHVDVFLRKAKSQDRPLTEVLAEHLRTVSGVVIEPEQ 958 Query: 960 WHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHI 1019 W + + + ++ F + DD+ + RSL+ L+ K ++ + L AD + G+ Sbjct: 959 WRQESLDNWYQMNFVLEDDRGVTIAMARSLEQLQRDFKQQISQGLEKAADQSTSRQGITE 1018 Query: 1020 WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIP 1079 W F +LPE + G +KAWPAL D DSV++++ DNPL+ ++ G RL LL Sbjct: 1019 WDFDELPEEVALQHGKISIKAWPALRDCGDSVSLEVMDNPLQAEKVSRQGQLRLALLRGR 1078 Query: 1080 SPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHE 1139 +KYL + L L L G LID IS + + + V ++ F ++ Sbjct: 1079 EQVKYLEKNLLRGKDLALKAANVGARQRLIDALISASFQQAVFSGHSVVRDQQQFDQAYD 1138 Query: 1140 KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVT 1199 + +++ + +E +L + ++ K+L+G + + DI+ Q+ L + Sbjct: 1139 QGISQVVGLAQSYTESIETLLPRLHDLQKQLRG-LGLPAIYAAEDIRNQLDWLFASETLC 1197 Query: 1200 GNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN-VQQAWQQWINKLPPARRED 1258 + + RY+ AI+ R+EKL +DR + ++ + + Q I P + + Sbjct: 1198 TVTDEIISQYPRYINAIQVRVEKLTQQQSKDRQHIAEISDLLTDCRQALIEDQPLSSDLE 1257 Query: 1259 EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + + W++EE RVS FAQQL T P+S KR+ + ++ Sbjct: 1258 AALLDYCWLVEEYRVSLFAQQLKTRVPVSLKRLNKRWVEV 1297 >UniRef50_D2NU22 HrpA-like helicase n=4 Tax=Bacteria RepID=D2NU22_9MICC Length = 1504 Score = 1453 bits (3763), Expect = 0.0, Method: Composition-based stats. Identities = 681/1437 (47%), Positives = 887/1437 (61%), Gaps = 143/1437 (9%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 Q+ R S + R +RR + + QQ + Q Sbjct: 63 GAQKNNADRKSSSRGASERNSNASRSNRRGVANNRARKQGNQQGGTNGNRQGEQQNRPAS 122 Query: 62 LLREAARPE-ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 E PE ITYP+ LPVS+++ DI+ AIRD+QVVI+AGETGSGKTTQ+PK+C++LG G Sbjct: 123 RRYEPFIPEVITYPEELPVSERRDDIMNAIRDNQVVIIAGETGSGKTTQIPKMCLDLGLG 182 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 KGLIGHTQPRRLAAR+VA RIAEEL + G +GY+VRF+ V +++ +KLMTDGILLA Sbjct: 183 EKGLIGHTQPRRLAARSVAERIAEELGQKIGETVGYQVRFTSEVGEHSAIKLMTDGILLA 242 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ D+LL +Y T+IIDEAHERSLNIDF+LGYLK +LP+RPDLK+IITSATIDPERF+RH Sbjct: 243 EIQNDKLLRRYSTLIIDEAHERSLNIDFILGYLKRILPQRPDLKVIITSATIDPERFARH 302 Query: 241 FNNA-----------------------------PIIEVSGRTYPVEVRYRPIVEEAD--- 268 F+ + PIIEVSGRTYPVE+RYRP+ EE Sbjct: 303 FSPSYVPGKGIVDENLSAEEREIAEAILPDDAPPIIEVSGRTYPVEIRYRPLDEEDYLSD 362 Query: 269 ---DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR----HTEIL 321 + + D I DA+ ELS+E+ GDILIF SGEREIRD DA+ + L+ + E+L Sbjct: 363 DEIEDDHDPTDGILDAIKELSKEAPGDILIFFSGEREIRDAKDAIEAMVLKSPRLNYEVL 422 Query: 322 PLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 PLYARLS +EQ+RVF S RIVLATNVAETSLTVPGIKYVID GTARISRYS RTKVQ Sbjct: 423 PLYARLSLAEQHRVFSPGSRPRIVLATNVAETSLTVPGIKYVIDTGTARISRYSARTKVQ 482 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMT 441 RLPIE ISQASANQR GRCGRVS+GI IRLYSE+DF SRPEFTDPEILRTNLA+VILQM Sbjct: 483 RLPIERISQASANQRSGRCGRVSDGIAIRLYSEEDFNSRPEFTDPEILRTNLAAVILQMI 542 Query: 442 ALGL----GDIAAFPFVEAPDKRNIQDGVRLLEELGAITT------DEQASAYKLTPLGR 491 A+G+ GDI+ FPFV+ P R I DGV LL ELGA+T + ++ LT +GR Sbjct: 543 AIGVVREPGDISRFPFVQPPASRAINDGVNLLRELGALTERPRSPRKGRGNSATLTAIGR 602 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 ++ PVDPRLARM++E + C +E M++ +AL+IQDPRERP D + +D H RF D Sbjct: 603 AMAAFPVDPRLARMIIEGGRRNCAKEMMVLAAALTIQDPRERPADVRAEADAMHVRFVDD 662 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 SDF +F+ LW+Y+ EQQ ALSS+ R++C +Y+NYLR+REWQD++ QLR++ + I Sbjct: 663 TSDFSSFLLLWDYINEQQAALSSSQLRKMCHREYINYLRIREWQDLFAQLREMGRTANIH 722 Query: 612 VN-----SEPAEYREIHIALLTGLLSHIGMKDADK----------QEYTGARNARFSIFP 656 + + A +IH +LL+GLLSH+G+K+ + +EY GAR +F+IFP Sbjct: 723 ASGGRDINASAHEIDIHKSLLSGLLSHVGVKEEREKDSKGRTRGPREYLGARGTKFAIFP 782 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GSGLFKK P WV+ AELVETSRLW R A IDP+W+E + +HLI YSEPHW + GA Sbjct: 783 GSGLFKKSPDWVLSAELVETSRLWARTNASIDPQWIEEIGKHLISVQYSEPHWSLSSGAA 842 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 +A K T++GL I A R V Y+++D A RELFI+ ALVEG W T+H F+ N + AEV Sbjct: 843 VAYAKGTLFGLTIYADRPVQYARVDAAAARELFIQSALVEGQWHTQHKFYLRNQRALAEV 902 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI 836 EELE + RRRD+ VDD LF FYD RI V R FD WWK+ E + L+F LI Sbjct: 903 EELEARLRRRDLRVDDSVLFAFYDARIPAHVTDVRAFDKWWKQARLEDDNFLDFNPEKLI 962 Query: 837 KEGAEKISKLDYPNFWHQ----GNLKLRLSYQFEPGAD----------ADGVTVHIPLPL 882 E A +P W Q G L L L Y++ P A DGV V +P+ Sbjct: 963 NEEAADYDDSQFPRQWVQRTDSGELTLDLRYEYAPTAGVGGARTDAAKRDGVAVQVPILF 1022 Query: 883 LNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELP---- 938 LNQ+ F WQIPGLR ELV ALIKSLPK +RRNFVPAP+ A A ++ P Sbjct: 1023 LNQLSPEPFRWQIPGLRHELVTALIKSLPKAIRRNFVPAPDVARAACAALEEDYSPATDE 1082 Query: 939 LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKG 998 LL SL LRR+ GV V+ E ++WD VP+HLK+ F+V + +NK L EG+ L+ L+ L Sbjct: 1083 LLPSLALVLRRLRGVVVEPEAFNWDAVPEHLKMGFQVRNARNKILGEGKDLRALQQQLHK 1142 Query: 999 KVQETLS----------------------------------------------------A 1006 +++ L+ A Sbjct: 1143 EIRSALADSLGASDEAMAKMVALAQGGSGNSGGSGNSGGSARPGSAKGAKNPAKGTQAEA 1202 Query: 1007 VADDGI-EQSGLHI-----WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 A G+ E +GL + G++P ++ V +PALVDE SV +++F Sbjct: 1203 GASGGVREVTGLTAFPADLFPNGEIPRKVQRVIATQAVNGYPALVDEGSSVGLRIFPTEA 1262 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 EQ A G+ RLL L +PSP++Y+ E L +K K+ NP+G + ELI DC +D L Sbjct: 1263 EQLHAQRRGIIRLLQLQVPSPVRYVSEHLSHKEKIVFTQNPHGSIDELIRDCTVAALDHL 1322 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMAL 1180 + P++T ++ L+E VRAEL +TV D+ K V +IL+ + K +K +T Sbjct: 1323 VPHT--PIFTHAAYSELYEHVRAELIETVFDVTKLVAEILSEATALKKAIKKATSLTTMH 1380 Query: 1181 GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENV 1240 +SD+KAQM LVY GFV G+ +L RYL+A + RL KL + HRD ML V+++ Sbjct: 1381 AVSDVKAQMENLVYPGFVAQTGYDQLVHLPRYLKAAQVRLTKLGPNLHRDNQLMLTVQDL 1440 Query: 1241 QQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 + ++ + LP + ++ + WMIEELRVS+FAQ+LGT Y +S+KRI +A + Sbjct: 1441 EDSYDNAVKSLPAGTIVPDALRRVNWMIEELRVSFFAQELGTAYTVSEKRIAKAQRE 1497 >UniRef50_C4LJ32 Putative ATP-dependent helicase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJ32_CORK4 Length = 1409 Score = 1442 bits (3733), Expect = 0.0, Method: Composition-based stats. Identities = 609/1397 (43%), Positives = 835/1397 (59%), Gaps = 112/1397 (8%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 + L +L + D RF RRL KK ++ A+ AI +++A Q A K+ Sbjct: 23 ASNAPSRKELYAQLTEVSAADEHRFRRRL---KKARSDRARHAIARDLAAARTQFAAKI- 78 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 A P ITYP +LPVSQ+ DI + IR HQV IVAGETGSGKTTQ+PKIC+ LGRG K Sbjct: 79 ---ATLPTITYPPDLPVSQRVDDIADTIRTHQVTIVAGETGSGKTTQIPKICLALGRGRK 135 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 G+IGHTQPRRLAARTVA RIA E+ + G +GY +RF D V +T +KLMTDGILLAE+ Sbjct: 136 GMIGHTQPRRLAARTVAERIASEVGQDIGQSVGYAIRFDDRVGPSTAIKLMTDGILLAEM 195 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF- 241 Q+DRLL YDTIIIDEAHERSLNIDF+LGY+K LLPRRPDLK+IITSATIDPE+F+RHF Sbjct: 196 QRDRLLRAYDTIIIDEAHERSLNIDFILGYIKRLLPRRPDLKVIITSATIDPEKFARHFA 255 Query: 242 ----NNAPIIEVSGRTYPVEVRYRPIVEE-------ADDTERDQLQAIFDAVDELSQESH 290 N APIIEVSGRTYPVE+RYRP E + E+D + +A +EL Sbjct: 256 DEEGNPAPIIEVSGRTYPVEIRYRPPYIERERKDGSVERIEKDPQDTVCEACEELMAAGP 315 Query: 291 GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 GDIL F ER+IR+ DA+ + E+ PL+ RLSN+EQ+RVF H GRRIVLATN+ Sbjct: 316 GDILCFFPSERDIREAHDAIEAKKWPNVEVTPLFGRLSNAEQHRVFSPHRGRRIVLATNI 375 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGI YV+D GTARISRYS RTKVQRLPIEPISQASANQR GR GR+++GI IR Sbjct: 376 AETSLTVPGIHYVVDTGTARISRYSTRTKVQRLPIEPISQASANQRSGRSGRIAKGIAIR 435 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYSE+DF SRPEFTDPE+LRTNLASVI+ M +L LGDI FPF++ P+ R I+DG+ +L Sbjct: 436 LYSEEDFDSRPEFTDPEVLRTNLASVIITMASLKLGDINEFPFIDPPEPRAIRDGMMVLH 495 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 ELGA+ E+ + L+ +GR++S++PVDPRLARM++EA V ++ +ALSIQD Sbjct: 496 ELGALGEGERDGSPVLSSIGREISRIPVDPRLARMLVEAHHRDVVEATSVVIAALSIQDV 555 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP D + +D+ H RF D +SDF++++ LW YL +K LS NAFR+ CR +YL+Y+R Sbjct: 556 RERPTDHEPQADQAHARFKDTDSDFMSYLRLWAYLTSIKKELSGNAFRKRCRAEYLHYMR 615 Query: 591 VREWQDIYTQLRQVVKELGIPVNSE----------------------------------- 615 VREW D QLR+V ++L + Sbjct: 616 VREWMDFVRQLRRVTEDLSWSWDQNRLTAVIPNDNDESTTPSTKKRSRPNKKAKSQNNNA 675 Query: 616 -------PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWV 668 ++ +H ++L+GLLS IG++ ++EY G R RF IFPGS L KK P+W+ Sbjct: 676 HPDMPMLTVDHDGLHRSILSGLLSQIGLRSDVRKEYQGTRGTRFFIFPGSSLHKKQPQWL 735 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLP 728 M AE+VETSR++ R AA I P WVE A L++ YSEPHW R + A MA ++ T++GLP Sbjct: 736 MAAEIVETSRMFARDAAAIQPRWVEEQASDLLRHQYSEPHWSRRRSAAMAYQRSTLWGLP 795 Query: 729 IVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 +V R ++Y +I+P RE+FIR ALVEGDW TRH FF N A ELE K+RRRD+ Sbjct: 796 VVTDRPISYHRINPREAREIFIRSALVEGDWVTRHKFFHLNRDKLATAGELEEKTRRRDL 855 Query: 789 LVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDY 848 L+DD+TL++FYD RI V + RHFD+WWKK S++ P LL+F+ L+ A IS+ D+ Sbjct: 856 LIDDDTLYDFYDSRIPASVTTGRHFDAWWKKESKKDPHLLDFDPDKLLHPEAHTISEDDF 915 Query: 849 PNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVE-ESGFEWQIPGLRRELVIALI 907 P+ W + L L+Y+FEPG D DGV+V IPLP++ + + F+W +PGLRRELV ALI Sbjct: 916 PDRWRAHSTDLELTYKFEPGEDDDGVSVRIPLPIIGSLSWDDRFDWNVPGLRRELVTALI 975 Query: 908 KSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPD 967 ++LPKP+R VPAP++A + + P E PL DSL LR + G + D+ ++P Sbjct: 976 RTLPKPLRTTVVPAPDFARRAIEMMHPYEQPLTDSLADALRAVGGSGMTSSDFDVAKLPL 1035 Query: 968 HLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV-------------------- 1007 HL++ F+ +D + + + R L LK + +SA Sbjct: 1036 HLRMNFQAIDRHGRVIDQDRDLDALKKRQSSAATQAMSAAFKRSKVGSALSRGHSHDDGS 1095 Query: 1008 -----------ADDGIEQSG------------LHIWS---FGQLPESYEQKRGNYKVKAW 1041 +SG W+ G LPES + A+ Sbjct: 1096 AQDLPQTQPDSQSSTARRSGEDATTVPDLGKVYAEWTDEGIGTLPESVQTTIDGQPTTAY 1155 Query: 1042 PALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNP 1101 PAL + + + M+ + LL+ +I + LP + ++ + P Sbjct: 1156 PALKVTSKGIEVVTSASQSTANSMMFTAVLTLLVQSIKINENQAVKGLPLQQRVAVEHYP 1215 Query: 1102 YGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILT 1161 +G + L++DC + + +G + E F AL + E++ T+ +++ + Sbjct: 1216 HGGLSGLVNDCRVAAIKDALVDHGVIERSPEAFEAL----KKEMSHTIPAATRRMVVAMA 1271 Query: 1162 AVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLE 1221 + + + + DIK Q+ L+ VT G L RY++A+E RLE Sbjct: 1272 PGLVAYESMAEEIKKWDGQAIEDIKRQLNILLPPNAVTRYGTGHLKHLQRYMKAVEIRLE 1331 Query: 1222 KLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLG 1281 + DP RD ++ N+++A++ + LP R + I + ++ELRV FA++LG Sbjct: 1332 NMERDPDRDADGQEEINNLERAFRSKLKGLPQQRANSPAARAIIFSLQELRVQVFAERLG 1391 Query: 1282 TPYPISDKRILQAMEQI 1298 T +S +RI +A+ ++ Sbjct: 1392 TAQKVSPQRITKAINKL 1408 >UniRef50_C5CA12 ATP-dependent helicase HrpA n=5 Tax=Micrococcaceae RepID=C5CA12_MICLC Length = 1367 Score = 1438 bits (3724), Expect = 0.0, Method: Composition-based stats. Identities = 659/1344 (49%), Positives = 859/1344 (63%), Gaps = 119/1344 (8%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 IT+P++LPV++++++I+ AIRDHQVVIVAGETGSGKTTQLPK+C+ LG G G IGHTQ Sbjct: 23 AITFPEHLPVAERREEIMAAIRDHQVVIVAGETGSGKTTQLPKMCLALGLGEAGSIGHTQ 82 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AAR+VA RIA+EL E G +GY+VRF+ S T VK+MTDGILLAEI D L Sbjct: 83 PRRIAARSVAERIAQELGEEIGQTVGYQVRFTAQTSKATRVKVMTDGILLAEIPHDPQLR 142 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN------- 242 +Y II+DEAHERSLNIDFLLGYL+ LLP+RPDLK+IITSATIDPERF+RHF Sbjct: 143 RYSVIIVDEAHERSLNIDFLLGYLRNLLPQRPDLKVIITSATIDPERFARHFGRSLAAGE 202 Query: 243 ---------------NAPIIEVSGRTYPVEVRYRPIVEEADDTE-----------RDQLQ 276 APIIEVSGRTYPVE+RYRP+ EE + RD L Sbjct: 203 DHADAVEADDGGRVVPAPIIEVSGRTYPVEIRYRPLTEEPSPDDPEDDADDAAETRDPLD 262 Query: 277 AIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSE 331 AI DAV EL+ E GDIL+F+ GEREIR+ AD L + L TEILPL+ RLS +E Sbjct: 263 AIGDAVLELAAEPPGDILVFLPGEREIREAADHLTGVVAGTTRLAGTEILPLFGRLSMAE 322 Query: 332 QNRVFQSHSG---RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 Q+RVF RRIVLATNVAETSLTVPGIKYVID GTARISRYS+RTKVQRLPIE + Sbjct: 323 QHRVFGRAGAGVRRRIVLATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERV 382 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL--- 445 SQASANQR GR GR S+GI IRLYSE+D+LSRPEFTDPEILRT+LASVILQM +LG+ Sbjct: 383 SQASANQRAGRSGRTSDGIAIRLYSEEDYLSRPEFTDPEILRTSLASVILQMLSLGVART 442 Query: 446 -GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLAR 504 GD+ FPFV+ PD R + DG L ELGA+ A A +T +GR+L++LPVDPRL R Sbjct: 443 PGDVKEFPFVQPPDGRQVTDGAATLTELGALEAGG-ARAGTITRVGRRLARLPVDPRLGR 501 Query: 505 MVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNY 564 M+LEA + GCVRE M+I +AL+IQDPRERP ++++A+DE HRRF D+ SDF A +NLW Y Sbjct: 502 MILEAGERGCVREVMVIAAALTIQDPRERPTEQREAADELHRRFADENSDFSAILNLWAY 561 Query: 565 LGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YR 620 L E+Q+ LS + FR+LCR +++N+LRV+EWQD+ QLRQ+ K++G+ V + P + + Sbjct: 562 LRERQQELSGSQFRKLCRREHINWLRVQEWQDLVRQLRQLTKDVGLTVEAGPVDPVGRHE 621 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 +H +LLTGLLS IG D ++EY GAR RF++FPGS LFKK +VM AELVETSRLW Sbjct: 622 AVHKSLLTGLLSQIGAYDERRREYAGARGTRFAVFPGSALFKKRHPFVMAAELVETSRLW 681 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R ARI+PEW E VA HL+KR Y+EPHW R G+V+A EKVT++G+ ++ R V Y +I Sbjct: 682 ARTVARIEPEWAEEVAGHLVKRAYNEPHWSRRAGSVVAREKVTLFGVTLIPDRSVRYGRI 741 Query: 741 DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYD 800 DP L RELFIRHALVEGDW+TRH FF N EV+ LE + RRRD+ + DE LF FYD Sbjct: 742 DPELSRELFIRHALVEGDWRTRHRFFARNRAALEEVDALETRLRRRDLRIGDEDLFAFYD 801 Query: 801 QRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQ----GN 856 RI DV+S RHFD+WWKK +E PDLL+ + + L+ AE + +P + G+ Sbjct: 802 ARIPGDVVSERHFDAWWKKARQEQPDLLDLDVAALLTADAEDLDTDAFPTTFTYPMPGGD 861 Query: 857 LKLRLSYQFEPGADA--DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV 914 ++L L Y F+P A DGVTV +P+ LLNQV F W +PGLR ELV ALIK+LPK V Sbjct: 862 VELDLEYTFDPTGAAGTDGVTVAVPILLLNQVSPGPFAWLVPGLRVELVTALIKALPKAV 921 Query: 915 RRNFVPAPNYAEAFLGRVKPLELP----LLDSLERELRRMTGVTVDREDWHWDQVPDHLK 970 R+N VPAP+ A+ + ++ P L D+L +RR+ GV V+ W D VP HL+ Sbjct: 922 RKNLVPAPDVAQQLVADLEAHADPLRDELPDALSAAVRRVRGVVVEPGLWALDAVPLHLR 981 Query: 971 ITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSA------------------------ 1006 + +RVVD + + G+ L L+ L + ++A Sbjct: 982 MDYRVVDARGAVMGAGQDLPALQARLAQANRSAIAARLAGTDDPASARPGPRGTGRGGRA 1041 Query: 1007 ---------------------VADDGIEQSGLHIWSFGQLPESYEQKRG--NYKVKAWPA 1043 E+ GL WS G +P++ G + +P+ Sbjct: 1042 QTDARAGAEGRRRPEGPGRSDATPAFEERHGLTSWSIGTVPKTVSTAAGARGPAITGYPS 1101 Query: 1044 LV-----DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLY 1098 LV D + + + + +Q G+ RLLL +PSP +Y+ + L N+ KL Sbjct: 1102 LVPETTPDGGPAAGLTVARSADDQAAWHRAGVIRLLLATLPSPQRYVLDHLDNREKLTFT 1161 Query: 1099 FNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQ 1158 NP+G V L+ DC VD+L+ + E F AL ++VRA+L DTV + VEQ Sbjct: 1162 QNPHGSVDSLVADCTQAAVDRLV--GDELPFDEAAFRALFDRVRADLIDTVFAVTSLVEQ 1219 Query: 1159 ILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEK 1218 +L+ + +RLKG V +A LSD+KA + LV+ GFV G++RL RYLQ + Sbjct: 1220 VLSRAAQVRRRLKGSVSPALASALSDVKAHLEQLVFPGFVAATGWERLQHLPRYLQGMLT 1279 Query: 1219 RLEKL--AVDPHRDRAQMLKVENVQQAWQQWINKLP---PARREDEDVKEIRWMIEELRV 1273 RL++L RD M V+ ++ + + +++ +RW+IEELRV Sbjct: 1280 RLDRLDAGGHLQRDGQHMAVVQGLEDEFDAAVAAHRARFAGTPVPAELERVRWLIEELRV 1339 Query: 1274 SYFAQQLGTPYPISDKRILQAMEQ 1297 S+FAQ+LGT +S+KR+ QA+ + Sbjct: 1340 SFFAQELGTAVSVSEKRVRQALAR 1363 >UniRef50_C8X757 ATP-dependent helicase HrpA n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X757_NAKMY Length = 1349 Score = 1427 bits (3694), Expect = 0.0, Method: Composition-based stats. Identities = 648/1340 (48%), Positives = 859/1340 (64%), Gaps = 56/1340 (4%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY 73 +RL L + DR R RL +++ +P + + E+ +++ A ++ R+AA P IT+ Sbjct: 13 ERLADLTIVDRRRLQGRLRSAERIPDPAKRDLVLAEIDHQLEAGAARLARRQAAVPTITF 72 Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 P LPVS + QD+ I +HQVVIVAGETGSGK+TQLPK+C++LGRG++G+IGHTQPRR+ Sbjct: 73 PAQLPVSARVQDLARTIAEHQVVIVAGETGSGKSTQLPKLCLQLGRGVRGMIGHTQPRRI 132 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AAR +A RIAEE T+ GG IGY +RF DH T+VKLMTDGILL EI +DR+L YDT Sbjct: 133 AARALAERIAEETGTQLGGAIGYSIRFGDHTGPTTLVKLMTDGILLTEIARDRMLWAYDT 192 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 IIIDEAHERSLNIDFLLGYL+ LLP+RPDLK+IITSATIDP +FSRHF +AP++EVSGRT Sbjct: 193 IIIDEAHERSLNIDFLLGYLQGLLPQRPDLKLIITSATIDPGKFSRHFADAPVVEVSGRT 252 Query: 254 YPVEVRYRP----IVEEADDTE----------RDQLQAIFDAVDELSQESHGDILIFMSG 299 +PVE+RYRP + E DD + DQ QAI AVDEL GDIL+F+SG Sbjct: 253 FPVEIRYRPYGLDALPEVDDPDAEQSRGSSESADQGQAITAAVDELLAAGDGDILVFLSG 312 Query: 300 EREIRDTADALNKLNLRH---TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 EREI DT + L TE+LPLY RLS+++Q++VF +H GRRIVL+TNVAETSLT Sbjct: 313 EREITDTTEVLRGHLAGRRGLTEVLPLYGRLSSADQHKVFSAHPGRRIVLSTNVAETSLT 372 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI+YVIDPGTARISRYS R+KVQRLPIEPISQASA QR GRCGRV+ GICIRLYSE D Sbjct: 373 VPGIRYVIDPGTARISRYSPRSKVQRLPIEPISQASAGQRAGRCGRVANGICIRLYSEKD 432 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F RP +TDPEI RT+LASVILQM AL LGDI FPF++ PD+R I DGV +L ELGAI Sbjct: 433 FDERPAYTDPEIARTSLASVILQMAALELGDIVDFPFLDPPDQRQITDGVTVLTELGAID 492 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 +LTP GR+++ LP+DPRLARM++E ++ RE +++ SAL++ D RE P+D Sbjct: 493 RSA-GDRVRLTPTGREMADLPLDPRLARMLVEGERRNVRREMLVLVSALAVIDVREYPLD 551 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 ++ + H RF D SDF A ++LW YL EQ K S NAFRR+CR +YLNYLR+REWQD Sbjct: 552 ERDKATAAHARFVDGNSDFNALISLWAYLEEQAKTQSGNAFRRMCRREYLNYLRIREWQD 611 Query: 597 IYTQLRQVVKEL------------------GIPVNSEPA-------------EYREIHIA 625 ++ QL Q++ +P +P + +H A Sbjct: 612 LHAQLSQLLDGGRRRGGRRRPDRPAPADRGSLPQRRDPDATQGGRGSLAVDVDTERVHTA 671 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 LL GLLSHIG++ +EY G R +SI+PGS L + P V+ AELVETSRLW RI A Sbjct: 672 LLAGLLSHIGLRKEGTREYQGTRGISYSIWPGSALARTGPVLVVAAELVETSRLWARICA 731 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 R++P WVE V L++R YSEP W + +V ATEKVT+ G+ ++AAR V + +IDP L Sbjct: 732 RVEPGWVEQVGADLLRRNYSEPRWNGKRASVEATEKVTLLGVTLIAARTVQFDRIDPELS 791 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 RELFIRHALVE DWQTRH FF +N + +V E E ++RRRDIL+DD+T+F YD RI Sbjct: 792 RELFIRHALVERDWQTRHRFFADNQRALEQVTEWEERARRRDILIDDDTMFALYDARIPP 851 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 V S RHFDSWWKK SR PDLL MLI GAE+ +P+ + G ++L L Y F Sbjct: 852 QVTSGRHFDSWWKKASRTQPDLLTLTPDMLIAAGAERFDSAAFPDRFTSGEVELPLDYVF 911 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 +PG DGVTV IPLP+L +V+ +GFE QIPGLR +L +ALI++LPK +RRNFVPAP++A Sbjct: 912 DPGRADDGVTVSIPLPVLARVDPAGFEAQIPGLRADLAVALIRTLPKTLRRNFVPAPDFA 971 Query: 926 EAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 A L R+ PL + L L RMTGV V D+ D+VP+HL++ FR+VD+ + Sbjct: 972 RAALDRIDAAR-PLAEELAGALTRMTGVVVRTADFDPDKVPEHLRMNFRIVDEHGATVAS 1030 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 GR L L+ L+ Q + A +E+ GL + +P + ++V +PALV Sbjct: 1031 GRDLPTLQSTLRTDTQRAV-VQATKSLERHGLTAFPEPGVPRRVRARVAGHEVTGYPALV 1089 Query: 1046 DER-DSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 E +V + +FD+ +Q++AM G LL + + + + L + ++ L P Sbjct: 1090 VEGPGTVGVAVFDSEADQRRAMRAGTIELLAAALTPSLTRVRQLLTREQQITLATAPGTT 1149 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 + L+ D VD L+D GGP W+ GFAA+ K+ + +V D+ E +L+A Sbjct: 1150 IPTLVADATRAAVDALLDWAGGPSWSAAGFAAVRTKLTPSMLTSVRDVLAAAETVLSAAG 1209 Query: 1165 NINKRL----KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRL 1220 + L +G +A D++AQ V GF+ G L D R LQA+ R Sbjct: 1210 AAARALDTAERGPGAAAVADLTRDMRAQWRAAVAPGFIVATGAAGLPDRARQLQALRIRA 1269 Query: 1221 EKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQL 1280 E++ RDR ++ ++ +Q + + +LP RR D DV+ + ++ E RV+ FAQ + Sbjct: 1270 ERVREAAGRDRERLAEIRELQAEVDRAVEELPEERRSDPDVQALHHLLAEYRVALFAQPM 1329 Query: 1281 GTPYPISDKRILQAMEQISG 1300 T P+S KRI A + G Sbjct: 1330 RTSVPVSAKRIRSAAAALGG 1349 >UniRef50_D0LBQ9 ATP-dependent helicase HrpA n=2 Tax=Corynebacterineae RepID=D0LBQ9_GORB4 Length = 1324 Score = 1425 bits (3690), Expect = 0.0, Method: Composition-based stats. Identities = 607/1330 (45%), Positives = 832/1330 (62%), Gaps = 46/1330 (3%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQ------QAIFQEMAKEIDQ 56 + L+ + +L + D R RRL + P A ++ + ++ Sbjct: 8 PAHRDDAAELRSSMATLTISDEHRLRRRLDKLVGSDKPTASAGESPDSEPWRRLRADVAA 67 Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 A +V R A+ P +T+P LPVS + +I EAIRDHQVV++AGETGSGKTTQLPKIC+ Sbjct: 68 AHRRVAKRTASVPTLTFPPELPVSAARTEIAEAIRDHQVVVIAGETGSGKTTQLPKICLG 127 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 LGRG++G+IGHTQPRR+AA +VA RIA+E +T G +GY VRF+D S ++++++MTDG Sbjct: 128 LGRGVRGMIGHTQPRRIAASSVARRIADETETTLGDVVGYSVRFTDRSSADSLIRVMTDG 187 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 ILL EI D LL +YDT+IIDEAHERSLNIDF+LGYL+ LLPRRPDLK+IITSATI+PER Sbjct: 188 ILLREIGTDPLLRRYDTLIIDEAHERSLNIDFILGYLRRLLPRRPDLKVIITSATIEPER 247 Query: 237 FSRHF----NNAPIIEVSGRTYPVEVRYRPIVEEA-----------DDTERDQLQAIFDA 281 F+RHF PI+EVSGRTYPV+VRYR + + + D Q I A Sbjct: 248 FARHFSTPAGEVPILEVSGRTYPVDVRYRALTLRESPDHGDDLGGGEHADLDLFQGIDAA 307 Query: 282 VDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG 341 +DEL GD+L+F+ ER+IRD AD L + EI+PLYARLS ++Q RVF G Sbjct: 308 IDELWSTGRGDVLVFLPTERDIRDAADTLRRRASAGAEIVPLYARLSVADQQRVFAPSDG 367 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 RRIVLATNVAETS+TVPGI+YV+D GTARISRYS RTKV RLPIEPISQASA QR GRCG Sbjct: 368 RRIVLATNVAETSVTVPGIRYVVDSGTARISRYSTRTKVNRLPIEPISQASARQRAGRCG 427 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 RV+ GICIRLYSE+DF +RP FTDPEILRTNLA+VILQMT+L LGDIA FPFV PD R Sbjct: 428 RVAPGICIRLYSEEDFDARPAFTDPEILRTNLAAVILQMTSLRLGDIADFPFVAPPDPRA 487 Query: 462 IQDGVRLLEELGAIT-TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 I+DG+ +L ELGAI D Q+ +LT +GR +++LPVDPR+ARM++ + GC+ ++ Sbjct: 488 IRDGIAVLTELGAIEMPDGQSGLPRLTAVGRSMARLPVDPRIARMLIAGHELGCLDHLVV 547 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 + +ALS+ D RERP D ++A+D HRRF SDFL+++ LW+YL E++ LS N FRR+ Sbjct: 548 LAAALSLPDVRERPSDHREAADAAHRRFAVPNSDFLSYLELWSYLEEKRTELSGNQFRRM 607 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAD 640 C +YL+YLR+REW+D+ QLR++V L + IH A+L+GLLS+I ++A+ Sbjct: 608 CEREYLHYLRIREWRDLTRQLREIVGNLDWSTARTERDADAIHRAVLSGLLSNIAARNAE 667 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 +E+TGARN IFPGSGL KKPP ++M AE++ETSRL+ A IDP W E +A L Sbjct: 668 GREFTGARNTTLMIFPGSGLAKKPPSFLMAAEILETSRLFAHTVAGIDPLWAEKLAGPLA 727 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 KRTYSEPHW +GA MA E+VT+YG+P+VA R+V+Y +IDP RELF+RHALVEGDW Sbjct: 728 KRTYSEPHWSARRGAAMAYERVTLYGVPLVARRRVDYGRIDPETSRELFLRHALVEGDWH 787 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 T+HAFF N L ++EHK RR+ +++ ++ LF+FYDQR+ +V SARHFD+WWKK Sbjct: 788 TQHAFFARNRALLEAAADVEHKVRRKGLVITEDQLFDFYDQRVGAEVTSARHFDTWWKKT 847 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 R PDLL+ ++ + A ++ D+P W QG+ + L Y+F+P A DGVTV IP Sbjct: 848 RRTQPDLLDLTPDDVVTDIA--VADTDFPGAWQQGDTRFELRYRFDPTAADDGVTVVIPE 905 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 PLL V +GF+W +PG R EL AL+K+LPK +R++ PA +A+ L R+ P P++ Sbjct: 906 PLLAHVRSAGFDWSVPGFRSELATALVKTLPKHLRKSMSPAQRFADLALSRLTPRAEPII 965 Query: 941 DSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKV 1000 L REL +T +TV D+ D++P HL++ F + D + + SL DL+ Sbjct: 966 TGLSRELSAITSMTVSAGDFDTDRLPAHLRVHFALADASGRIVDTDDSLADLQHRHSDT- 1024 Query: 1001 QETLSAVADDGIEQSGLHIWS---FGQLPESYEQKRGNYKVKAWPALVDERD------SV 1051 + ++ W+ G L + + ++ +PAL D V Sbjct: 1025 ------DSHRAPQRQVYTAWTSDGIGTLGDHTRMRVAGQQLTRYPALESVLDAQGRARGV 1078 Query: 1052 AIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDD 1111 NP + + + + LL + IP K + L +L L +PY +L D Sbjct: 1079 TRTDASNPESRDRLVGGAVTTLLEIAIPPLTKKIVGGLDAGGRLALSQSPYRHGEDLFAD 1138 Query: 1112 CISCGVDKLIDANG--GPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKR 1169 C + L + T E F AL +++R ++ + L AV + Sbjct: 1139 CTRRAIRDLAAQRPAIAAIRTPEDFHALRDELRPLVSTAAPEYFALAVDALRAVAPLRTL 1198 Query: 1170 LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHR 1229 + D+ Q+ L++ GFV + L + RYL + RLE L R Sbjct: 1199 IDRHAGSV---AADDVAEQLDHLIFDGFVRATPRRHLAELGRYLLGAQTRLEGLPASADR 1255 Query: 1230 DRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDK 1289 DRA + ++ V Q W Q + ++P RR D +E +W++EELRV FAQ+LGT YP+S+K Sbjct: 1256 DRAGVAIIDRVTQRWNQRLAQVPENRR-DAVNEEAQWLVEELRVGVFAQRLGTAYPVSEK 1314 Query: 1290 RILQAMEQIS 1299 R L+ ++++ Sbjct: 1315 RALRTLDRLG 1324 >UniRef50_C8RTL0 ATP-dependent helicase n=4 Tax=cellular organisms RepID=C8RTL0_CORJE Length = 1325 Score = 1424 bits (3686), Expect = 0.0, Method: Composition-based stats. Identities = 599/1294 (46%), Positives = 834/1294 (64%), Gaps = 72/1294 (5%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 + P I+YPD LPVS++++DI +AI D+QVVI+AGETGSGKTTQ+PK+C+ELGRG +IG Sbjct: 41 SIPPISYPD-LPVSERREDIKQAIEDNQVVIIAGETGSGKTTQIPKMCLELGRGRTKVIG 99 Query: 127 HTQPRRLAARTVANRIAEELKTEPGG---CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 HTQPRR+AAR+VA RIAEEL E G +GYK+RF D +S +T VKLMTDG+LL EIQ Sbjct: 100 HTQPRRIAARSVAERIAEELDQEIGDDTSLVGYKIRFDDTISKHTAVKLMTDGVLLNEIQ 159 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 +DRLL YDTII+DEAHERSLNIDFLLGYLK+LLP+RPDLK+IITSATIDPE F++HF + Sbjct: 160 RDRLLRDYDTIIVDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSATIDPESFAKHFAD 219 Query: 244 A-----PIIEVSGRTYPVEVRYRPIVEEADDT--------ERDQLQAIFDAVDELSQESH 290 A PIIEVSGRTYPVE+RYRP+V E ++ E D L + A EL + Sbjct: 220 ANGSPAPIIEVSGRTYPVEIRYRPLVTERENPKTGEVIEVETDPLDGLVGACRELMRAGD 279 Query: 291 GDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIV 345 GDIL F SGEREIRD A+AL R ++LPL+ RLSN+EQ+RVF + RRIV Sbjct: 280 GDILCFFSGEREIRDAAEALEGEFAGAGGARKVDVLPLFGRLSNAEQHRVFHTGPRRRIV 339 Query: 346 LATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSE 405 LATN+AETSLTVPGI YV+D G ARISRYS RTKVQRLP+EPISQASA QR GR GR+++ Sbjct: 340 LATNIAETSLTVPGIHYVVDTGYARISRYSNRTKVQRLPVEPISQASAKQRSGRSGRIAD 399 Query: 406 GICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 GI IRLYSE+DF +RPEFTDPEILRT+L+SVIL M ALGLGDI FPF++APD ++I+DG Sbjct: 400 GIAIRLYSEEDFEARPEFTDPEILRTHLSSVILSMAALGLGDIERFPFLQAPDSKSIRDG 459 Query: 466 VRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 V LL+ELGA+ + ++A+ LTP+GR ++++P DPRLARM++ + + +I SAL Sbjct: 460 VALLQELGALASTKEAA---LTPIGRDMARIPTDPRLARMLVAGHANNIIEPIAVIVSAL 516 Query: 526 SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY 585 SIQD RERP++KQQ +DE H RF SDF++ + LWNYL EQ++ LS+N FRRLC+ ++ Sbjct: 517 SIQDVRERPLEKQQQADEMHARFK-ANSDFVSLLKLWNYLQEQRQELSANKFRRLCQREF 575 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPV-----------NSEPAEYREIHIALLTGLLSHI 634 ++Y+RVREW D+ Q+ VV++L + E + +H ++LTGLL+H+ Sbjct: 576 IHYVRVREWMDLVRQMLSVVQDLSWKIPNIRHVRELVFEPEAIDEDLVHQSILTGLLTHV 635 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 GM++ + +++TG R + F + P S + KKPP+W+M AELVETS+++ R IDP W+E Sbjct: 636 GMREGNSKQFTGTRGSHFVVHPSSHVSKKPPQWLMAAELVETSQVFARTVGPIDPSWIET 695 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 +A H++K YSEP W ++GA M EKV + GLPIVA R VN S++D AL RELFIRHAL Sbjct: 696 IAPHMVKYNYSEPVWSSSRGAAMVHEKVLLLGLPIVADRMVNASKVDRALARELFIRHAL 755 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 VEGDW+TRH FF N KL +E ELE K+RRRDI+VDD+TLF+FYD R+ ++S+RHFD Sbjct: 756 VEGDWKTRHHFFAHNQKLLSEATELEDKARRRDIVVDDQTLFDFYDARLPEKIVSSRHFD 815 Query: 815 SWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV 874 SWWKK + P L+F LI + ++P+ W QG+L+ LSY F PG DG+ Sbjct: 816 SWWKKARHKDPHQLDFTLDALIDSEEAAKAADEFPDVWRQGSLEFELSYVFLPGDPDDGM 875 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP 934 T+ +P+PLL V E W + G+R EL IALI+SLPKP+R + VPA N+A A L R+ P Sbjct: 876 TMRVPIPLLANVSEPETRWLVAGMREELAIALIRSLPKPLRTSVVPASNFASAALKRMVP 935 Query: 935 LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKD 994 + +L LR + G + +D+ W +VP HL++ F +D + +++ R L+ L++ Sbjct: 936 FDGEFGFALAEALRELGGQGISAQDFDWSRVPGHLRMQFAAIDRRGNVIEKSRDLKYLQN 995 Query: 995 ALKGKVQETLSAVA-------------------DDGIEQSGLHI--------WS---FGQ 1024 L G+V ++ A +Q+G W+ G Sbjct: 996 KLAGQVTSAIAQAAARSKGAAPSDAAQHTPSRRKASKKQAGTSTGVLATADAWTADGIGV 1055 Query: 1025 LPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKY 1084 LPE+ E + +PA+V +D V +K F + + +++ K Sbjct: 1056 LPETVETVVDGQTLNTYPAIVATQDRVTLKAFPTKQAADGQQFTTVLNMMVAACTVSPKQ 1115 Query: 1085 LHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 + + LP + ++ + P G V L++D ++ ++ G + + + ++ Sbjct: 1116 MIKGLPLRQRVAMENTP-GGVDGLVNDVVALACRDMLMKLGPVIRDPDKCDEVVAVAHSQ 1174 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 V + + AV +++ LKG + D+ AQ+ + + + NG + Sbjct: 1175 GPGRVRQYVVALAPAVLAVADMSAELKG----WSGEAIDDMHAQLNFFLGKHAIARNGIE 1230 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 + RY++A+ RLE + DP+++ +V+ + ++ +LP AR +KE+ Sbjct: 1231 HMRHVPRYVEAMRARLELMKADPYKEEDLDQEVQEAFELLEKTKKRLPTARAASPQIKEV 1290 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RWMIEELRVS FAQ LGT + +S +RI + +E+I Sbjct: 1291 RWMIEELRVSLFAQNLGTAHSVSLQRIRKKLEKI 1324 >UniRef50_C7ME24 ATP-dependent helicase HrpA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7ME24_BRAFD Length = 1297 Score = 1423 bits (3683), Expect = 0.0, Method: Composition-based stats. Identities = 633/1283 (49%), Positives = 842/1283 (65%), Gaps = 55/1283 (4%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGH 127 P +TYP +LPVSQ+++DI AI +HQVV++AG TGSGKTTQ+PK+ +ELG G G IGH Sbjct: 18 PRLTYPGDLPVSQRREDIQAAITEHQVVVIAGATGSGKTTQIPKMLLELGYGQGGKLIGH 77 Query: 128 TQPRRLAARTVANRIAEELKTEPGG-CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AAR+VA RIA E+ + G +GY+VRF+ S T +KLMTDGILLAEI +DR Sbjct: 78 TQPRRIAARSVAQRIAGEMGEKLGEGTVGYQVRFTRETSRGTRLKLMTDGILLAEIGRDR 137 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN---- 242 LL +YD IIIDEAHERSLNID +LGYL+++LP+RPDLKIIITSATIDPERF+ HF Sbjct: 138 LLKRYDAIIIDEAHERSLNIDVILGYLRQILPQRPDLKIIITSATIDPERFAEHFAKVLP 197 Query: 243 -----NAPIIEVSGRTYPVEVRYRPIVEE-----------ADDTERDQLQAIFDAVDELS 286 APIIEVSGRTYPVE+RYRP+V E ERD QAI DAVDELS Sbjct: 198 SGERRPAPIIEVSGRTYPVEIRYRPLVLEPEMEDDDELEDVHSIERDLTQAIIDAVDELS 257 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLR--------HTEILPLYARLSNSEQNRVFQS 338 E GD+L+F+ GEREIR+ ++AL R E+LPL+ RLS +Q ++F Sbjct: 258 AEGPGDMLVFLPGEREIREISEALTTHLSRGTRGRGALPVEVLPLFGRLSAQDQQKIFSP 317 Query: 339 HSG---RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 RR++L+TNVAETSLTVPGI YVID G ARISRYS RTKVQRLPIEPISQASA+Q Sbjct: 318 PKAGTYRRVILSTNVAETSLTVPGITYVIDSGLARISRYSQRTKVQRLPIEPISQASADQ 377 Query: 396 RKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 R GR GR + GI IRLYS++DF RPEFT+PEILRT+LASV+L MT+LGLGD+ AFPFVE Sbjct: 378 RSGRSGRTAPGIAIRLYSQEDFEGRPEFTEPEILRTSLASVVLLMTSLGLGDVEAFPFVE 437 Query: 456 APDKRNIQDGVRLLEELGAI-TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 P R I DGVRLL+ELGAI + +LT +GR L++ P+DPR+ARM++EA + G Sbjct: 438 PPANRAITDGVRLLDELGAIEDAPGEPGGRRLTRIGRSLARFPLDPRMARMLIEADRLGA 497 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 +RE ++I + LSIQDPRERP+ ++Q + EKH+RF D+ SDFLAF+NLWN+L +++K LSS Sbjct: 498 LREVLVIVAGLSIQDPRERPLGQEQQAKEKHKRFEDETSDFLAFLNLWNHLRQRRKELSS 557 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 +AFRR R ++L+YLR+REW D++ QLR + K+ G+ N A + IH +LL GLLSH+ Sbjct: 558 SAFRREVRAEHLHYLRIREWWDLHAQLRDMAKDAGLSRNDNDASPQAIHQSLLAGLLSHV 617 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 G+ D +EY GAR ARF+++PGS L KK P +VMVAELVETSRLWGR AARIDP W E Sbjct: 618 GLLDDRTREYAGARGARFALWPGSALAKKRPDYVMVAELVETSRLWGRTAARIDPAWAEE 677 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 H++KR++S PHW + + MA +KVT+YG+P+VA R V Y +IDP RE+F++HAL Sbjct: 678 TGAHVVKRSHSAPHWSSKRASAMARQKVTLYGVPLVADRVVGYGRIDPEAAREIFLQHAL 737 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 +EGDW+TRH FFR+N L E+EELE K+RRRD+L+ DE LF FYD+RI V+S RHFD Sbjct: 738 IEGDWRTRHHFFRDNRALIQELEELEAKTRRRDLLISDEQLFRFYDERIPRTVVSGRHFD 797 Query: 815 SWWKKVSRETPDLLNFEKSMLI--KEGAEKISKLDYPNFWHQGNLKLRLSYQF-EPGA-D 870 SWWK ETPDLL + L+ E + D+P+ W QG++ L LSY F E GA Sbjct: 798 SWWKTQRHETPDLLTLTEKDLLAADESVAEAIAADFPDSWVQGDITLPLSYAFGEVGAKG 857 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 ADGVT +PL +LN+++ GF+W +PG+R ELV LI+SLPKP+RR+ VPAP A+A Sbjct: 858 ADGVTATVPLAVLNRLQARGFDWLVPGMREELVTELIRSLPKPIRRHLVPAPERAKAVAT 917 Query: 931 RVKPLE----LPLLDSLERELRRMTGV----TVDREDWHWDQVPDHLKITFRVVDDKNKK 982 + + P L+++ EL + GV + ++ ++P HL++ FRVVDDK ++ Sbjct: 918 TLHDDDPDTGEPFLEAVADELVALPGVPDDLPLYGPEFDVAKLPAHLRMHFRVVDDKGRQ 977 Query: 983 LKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWP 1042 + G L+ LK LK +V ++S+ A D + ++ L + +P +E G KV +P Sbjct: 978 IGTGDDLEALKGTLKERVDASVSSQA-DSLARTDLPAFPDEGVPAVHESTVGGLKVTGYP 1036 Query: 1043 ALVDERD------SVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLG 1096 ALV R V + + EQ A G+ LL ++ + + + LP KL Sbjct: 1037 ALVARRGEDGRLQRVDLAVLATADEQALAHREGVIALLDRDLGADLAAVLNALPTPTKLA 1096 Query: 1097 LYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQV 1156 + Y L+ D L A V T+ + AL ++VR + + K Sbjct: 1097 AASSDYASTAALLADASRAATVHL--AGTAEVRTKAQYDALLDRVRRQHDALAAQAVKDA 1154 Query: 1157 EQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAI 1216 L ++K L + + L+ I+ L+ GF++ G + L D RYL+A Sbjct: 1155 AAALAVSGTLHKALSRVPSLAVLSHLTQIREHAASLLGDGFISRTGIEHLPDLRRYLEAD 1214 Query: 1217 EKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYF 1276 RLEKL +P RD ++ +++Q W KL RR + DV+EI W++EELRVS F Sbjct: 1215 AIRLEKLPSNPRRDEQLAWQIGDLEQYWAARKAKLSARRRAEADVREIDWLLEELRVSLF 1274 Query: 1277 AQQLGTPYPISDKRILQAMEQIS 1299 AQ LGT +SDKRI +A+ +I+ Sbjct: 1275 AQTLGTKQTVSDKRIRKAIAEIA 1297 >UniRef50_A0L8U8 ATP-dependent helicase HrpA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8U8_MAGSM Length = 1305 Score = 1419 bits (3675), Expect = 0.0, Method: Composition-based stats. Identities = 545/1287 (42%), Positives = 779/1287 (60%), Gaps = 17/1287 (1%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQ--QAIFQEMAKEIDQAAGKVLLREAARPEITY 73 + M+R R R L +++ ++ + + + +V R P + Y Sbjct: 17 VAHTMIRHRHGLRRALGALQQDHRQGRAIAPHALEKFRQRLTASCDEVAKRRQQLPILRY 76 Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 P+ LP+S K++ I +AI HQ+++++GETGSGKTTQLPKIC+ELG G+ G IG TQPRR+ Sbjct: 77 PEQLPISSKREAIQQAIAQHQIIVLSGETGSGKTTQLPKICLELGLGVHGYIGVTQPRRI 136 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA +A +A +L T G +GYKVRF D V ++ +VK++TDG+LLAE QQDR L +Y+ Sbjct: 137 AASGIAQFLASDLGTPLGEKVGYKVRFHDQVGEHALVKVLTDGMLLAETQQDRFLSRYEA 196 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 IIIDEAHERSLNIDFLLG LK + RRPDLKIII+SAT+D ++F+ HFN+APII VSGRT Sbjct: 197 IIIDEAHERSLNIDFLLGLLKGITVRRPDLKIIISSATLDTDKFAAHFNHAPIISVSGRT 256 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADALNK 312 YPV VRY P+ E+ + +++A+ AV+EL ++ GD+LIF+ GEREI++ A+AL K Sbjct: 257 YPVAVRYNPLDEKNEPDSDQRMEALLFAVEELFEDLPDGDVLIFLPGEREIKEAAEALRK 316 Query: 313 LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 + H EI+PLYARLS EQ R+F S RRI+L+TNVAETSLTVP I VID G AR+S Sbjct: 317 HHPAHVEIVPLYARLSAKEQQRIFNPGSKRRIILSTNVAETSLTVPRIHGVIDTGLARMS 376 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 R+S RT+VQRLPIE ISQASANQRKGRCGR++ GICIRLYSEDDF RP +TDPE+LRT+ Sbjct: 377 RFSTRTQVQRLPIERISQASANQRKGRCGRLAAGICIRLYSEDDFNQRPLYTDPEVLRTS 436 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LA+VIL M AL LGD FPF++AP I++G+RLL+EL + +E LT +GRQ Sbjct: 437 LAAVILTMKALKLGDPHKFPFIDAPKPTAIREGIRLLKELDGLDDNEN-----LTDIGRQ 491 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 L+ LP+DPRLARM+L A++ C++E +I+ +ALS QDPRE P ++ + + H RF + Sbjct: 492 LAHLPLDPRLARMLLAAERFHCLQELLILAAALSTQDPREFPEAEKGGAKQHHARFSEPR 551 Query: 553 SDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 S+F+ + LW ++ E ++A S R + YL+ LRVREWQDI QL + VKELG+ Sbjct: 552 SEFIGRLRLWRHIEEMAEQARSKTQLRNALKKQYLSPLRVREWQDITHQLTRTVKELGLK 611 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVA 671 +N P +Y IH ALL GLL ++GMK +K +Y G R F IFPGS LF K PKWV+ A Sbjct: 612 LNEAPGDYAAIHKALLAGLLGNLGMK-GEKHQYDGVRGLSFHIFPGSELFGKSPKWVVAA 670 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVA 731 ELVETS+L+ R+ A+I+PEWVE VA HL+K+ +PHWE+ M E+VT++GL ++ Sbjct: 671 ELVETSKLYARLLAQIEPEWVEEVAPHLVKKHPFDPHWEKRAAQTMVYERVTLFGLTLIP 730 Query: 732 ARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVD 791 R V Y+ I PA R +FI + LV GD + F++ N L E E LEH++R R L D Sbjct: 731 KRSVPYAPIAPADARAMFIHNGLVAGDMHSNAPFYQHNRALIEEAEGLEHRTRERGYLAD 790 Query: 792 DETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNF 851 D+ LF+F+D + D+ + + D W + R+ P L + ++ ++ A + +P Sbjct: 791 DQALFDFFDGVLPPDINNLQALDQWRRSAERKNPKALFLPREVVFQQRA-NLDDAQFPGH 849 Query: 852 WHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLP 911 + +L L YQF PG DGVT IPLP+LNQ + F+W +PGL E ++ L K LP Sbjct: 850 ITLRDHELALIYQFNPGQGNDGVTTVIPLPVLNQFRTADFQWLVPGLLEEKIVGLFKILP 909 Query: 912 KPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKI 971 K RR+ VP P A+ ++ + L L R + G + + W W+ +P+HL++ Sbjct: 910 KRYRRHLVPLPQTAKWCAAQLPFNQGTLTALLARLIEPKVGEEIPPDAWQWENLPEHLQM 969 Query: 972 TFRVVDDKNK-KLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE 1030 FR+VDD N+ L +GR L L++ ++ A+ E+SGL W+F LP Sbjct: 970 NFRIVDDSNRKVLAQGRDLALLQEHYAEDARDRFEALPKVSHEKSGLLNWNFDPLPLRMA 1029 Query: 1031 -QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKL 1089 N + +PAL D+ SV I + + + ++ GLRRLLLL + +K + + Sbjct: 1030 LMTERNRPITCYPALRDDGGSVGIAMAETQEQAQRMHHAGLRRLLLLQVHQQVKMVQKNP 1089 Query: 1090 PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG----PVWTEEGFAALHEKVRAEL 1145 P + ++ + L+ + D++ N G V + F + + RA L Sbjct: 1090 PISNQALAHYTHLERKEVLVKSLLHAAADRVFFENQGVLPEQVRNQADFQKILAQGRAHL 1149 Query: 1146 NDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKR 1205 V + K +++ + LK + T DI+A + L+ +GF+ + Sbjct: 1150 IPEVEAMGKLLDETFVQFGLLRNALKKPMYPTQQKVAMDIEAHLDKLLGQGFLRTTPPQW 1209 Query: 1206 LGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIR 1265 L RYL+A+ RLE+ + +D + + Q+ + + + K + R Sbjct: 1210 LSHLPRYLKAMLLRLERGRHNSGKDLERQAEYSVWQEKYDRLMEKYQHETHLPAALVLFR 1269 Query: 1266 WMIEELRVSYFAQQLGTPYPISDKRIL 1292 W +EE RVS FAQ L T P+S KR+ Sbjct: 1270 WALEEYRVSLFAQDLKTAIPVSHKRME 1296 >UniRef50_C1ZJL9 ATP-dependent helicase HrpA n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJL9_PLALI Length = 1305 Score = 1416 bits (3667), Expect = 0.0, Method: Composition-based stats. Identities = 533/1298 (41%), Positives = 776/1298 (59%), Gaps = 21/1298 (1%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKKV-KNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 F AL++RL M DR S+ L ++ + ++++ R A Sbjct: 13 FAALRKRLPEAMAADRSGLSKLLETTARMAQRGQPFDRNLHRFTDWLEKSITARNDRLAR 72 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 RP I Y + LP+ Q++++ L+ + H V+IV GETGSGK+TQLPK C+E RGI GLIGH Sbjct: 73 RPAIHYDNELPIMQRREEFLKLLSQHSVIIVCGETGSGKSTQLPKFCLEAQRGIDGLIGH 132 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AAR+VA R++EEL+ G +GYKVRF + V + +KLMTDGILLAEIQ D Sbjct: 133 TQPRRIAARSVAMRLSEELRAPLGQAVGYKVRFQEAVGAESYIKLMTDGILLAEIQSDPH 192 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----NN 243 L +YDTIIIDEAHERSLNIDFLLGYLK LL +R DLK+IITSATID ERFS+HF Sbjct: 193 LRRYDTIIIDEAHERSLNIDFLLGYLKRLLTQRKDLKVIITSATIDAERFSQHFEVDGKP 252 Query: 244 APIIEVSGRTYPVEVRYRPIVEEAD---DTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 APIIE SGR+YPVE+ YRPI+ + D D + D QAI +AV E + + GDIL+F+ E Sbjct: 253 APIIEASGRSYPVEILYRPILSKGDAAEDNDIDMQQAIVEAVQEATSQGFGDILVFLPTE 312 Query: 301 REIRDTADALN--KLNLRHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLATNVAETSLTV 357 REI +TA L + H EILPLYARLS +EQ RVFQ S S RRI+LATNVAE+SLTV Sbjct: 313 REIHETAKILRGGERAASHREILPLYARLSAAEQQRVFQVSQSQRRIILATNVAESSLTV 372 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI+YVID GT R+SRYS R+K+QRLPIEP+SQASANQR GRCGRV GIC RLY E DF Sbjct: 373 PGIRYVIDTGTVRLSRYSPRSKIQRLPIEPVSQASANQRAGRCGRVGPGICYRLYDEADF 432 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 +R FT PEILRTNLA VIL+ +LGLG +++FPF++ P +I+DG R L ELGA+ Sbjct: 433 AARDPFTVPEILRTNLAQVILKTESLGLGSLSSFPFLDPPRTESIRDGYRTLFELGAVDL 492 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 D +LT LG++LS++P DPR+AR++ A + C+ E +II SAL QD RERP+ K Sbjct: 493 DN-----RLTELGKKLSRIPTDPRIARVLFAADEQLCLAEMLIIASALETQDVRERPVGK 547 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 Q A+DE H +F D+ SDF+ ++ +W++ E + LS + ++ C +YL+ R+REW D+ Sbjct: 548 QDAADEAHAKFLDETSDFVTYLKIWDFYHELKAKLSHSQLKKACSQNYLSLTRLREWSDL 607 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 + +L ++V+ G+ + + IH A+L G ++I MK D EY A I+PG Sbjct: 608 HRELSELVRAAGLKIRPRLQDTSAIHRAILAGFPTNIAMKT-DSGEYQMGGGALGVIWPG 666 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVM 717 SG+ K+ P+W++ AE VET+R + RIA +I+ EWVEP +HL+ RTY +PHW+ +V+ Sbjct: 667 SGMAKQKPRWIVAAEFVETTRRFLRIAGKIESEWVEPYVEHLVNRTYHDPHWDARSRSVV 726 Query: 718 ATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVE 777 A EKV++ GLPIV RK + +++ A +E+FIR ALVEGD+ AF NL LR E+E Sbjct: 727 AYEKVSLQGLPIVNRRKTQFGRVNAAQAQEIFIRQALVEGDYPNPPAFLAHNLALRQELE 786 Query: 778 ELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK 837 +L+ + R+ ++ D ET +FY QR+ D+ D W + ++++PDLL + L+ Sbjct: 787 DLQARLRKTSLIADPETQAKFYAQRLPPDIYDGPRLDKWLRIATKDSPDLLKMTREDLLA 846 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 + A++ + +P+ G+L+ + Y EPG DG+T+ +P Q+E W +PG Sbjct: 847 QEADEDWRERFPDQIRVGSLQAEVEYHLEPGTAQDGITIKVPQAAFRQLEWQRLGWLVPG 906 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDR 957 L E ++AL++ LPK R P P + L +K + L+D L +R G V Sbjct: 907 LLEEKIVALLRGLPKEYRVTLSPIPESVKQILPLLKMGQGSLVDQLAEIVRSRFGARVLP 966 Query: 958 EDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGL 1017 + ++P+HL++ R++D+ +++ R L+ + S + +E++GL Sbjct: 967 AMFDESKLPNHLRMNIRLIDNSGEEVLSSREQTQLEAHAGQLIP---SELISKSMERTGL 1023 Query: 1018 HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLN 1077 W F + E ++ ++ +PA+VDE +V +KLFD + G+RRL +L Sbjct: 1024 KTWDFATVHEKVIVRQNGLEIDGFPAIVDEGKTVGLKLFDTAIRALHEHKRGVRRLAVLK 1083 Query: 1078 IPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 + + LP + L + L + I + + + E F Sbjct: 1084 LQKELSMQVTHLPEIKRWELAAKALPQPFPLKEHLIDLLAMRAVCEGKVLPRSPEQFQLA 1143 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 + EL + V ++ + + I I RL R+ L D++ Q L+ GF Sbjct: 1144 IDAGFDELGNAVTEVMRLMSSIFQQTAEIRVRL-DRIPPVHDLTKRDLQRQYQWLLTPGF 1202 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 ++ + L RYL+AI R+++L + +DR +++ +E + Q N+ + Sbjct: 1203 LSQTPWFWLAQFPRYLKAILLRMDRLTGNAAKDRDRIMNLEPWIVRYAQRWNEHKRRKYV 1262 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 D +++ RWMIEE R+ F Q++ T P+SDKR+ + Sbjct: 1263 DVELETFRWMIEEYRIHLFVQEMATAVPVSDKRLEKQW 1300 >UniRef50_A0Z814 Helicase, ATP-dependent n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z814_9GAMM Length = 1246 Score = 1390 bits (3598), Expect = 0.0, Method: Composition-based stats. Identities = 546/1234 (44%), Positives = 784/1234 (63%), Gaps = 17/1234 (1%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 I +PD LPV +++++I EAI HQVVI+AGETGSGKTTQ+PKIC+ELGRG + IGHTQ Sbjct: 16 PIKFPDELPVCERREEIREAISQHQVVIIAGETGSGKTTQIPKICLELGRGQEARIGHTQ 75 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAAR VA RIA+EL++E GG +GYKVRF+D V+ +T +KLMTDGILLAE+Q+DR L Sbjct: 76 PRRLAARRVAERIADELESELGGLVGYKVRFNDSVAPSTAIKLMTDGILLAELQRDRELR 135 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 YDT+IIDEAHERSLNIDF+LGYL+ LLP+RPDLK+IITSATID +RFS+HF+NAP+IEV Sbjct: 136 DYDTLIIDEAHERSLNIDFILGYLRALLPKRPDLKVIITSATIDVDRFSQHFDNAPVIEV 195 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA 309 SGR +PVEV Y + A+D DQ+ D + GD+LIF+ GEREIRD + Sbjct: 196 SGRLFPVEVLYLGDSDGAEDGVEDQIVRAVDGIVAEDFGPRGDVLIFLPGEREIRDLSRR 255 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHS-GRRIVLATNVAETSLTVPGIKYVIDPGT 368 L R +ILPLYARLS +EQNRVF+ G R+VLATNVAETSLTVPGI+YVIDPGT Sbjct: 256 LKGDERR--QILPLYARLSAAEQNRVFKPTGSGMRVVLATNVAETSLTVPGIRYVIDPGT 313 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 AR+SRYS+RT++QRLP+E ISQ+SA+QRKGRCGRV+ G+C+RLYSE DFL+RP+FTDPEI Sbjct: 314 ARVSRYSHRTRLQRLPVERISQSSADQRKGRCGRVAAGVCLRLYSEQDFLARPQFTDPEI 373 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 LRTNLA+V+L+M LGLGD+ FPFV+ P+ + ++DG RLLEELGAI+ KLT Sbjct: 374 LRTNLAAVVLKMLELGLGDVQKFPFVDPPEGKMVRDGQRLLEELGAISA-----RGKLTS 428 Query: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548 LGR++++LPVDP+LARMV A + C+ E +++ SAL++QDPR+RP +K+ +D+ H RF Sbjct: 429 LGRKMARLPVDPKLARMVHAAGELKCLEEVLVVVSALAVQDPRDRPAEKRAQADQAHARF 488 Query: 549 HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 + SDFL+++NLWNY EQ+++LS N FR+LC+ ++L+++R+REW+++++QL +++ Sbjct: 489 NHPRSDFLSWLNLWNYYEEQRQSLSQNQFRKLCQREFLSFMRLREWREVHSQLVIACRQV 548 Query: 609 GIPVN---SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 + ++ ++ +H ALL+GLL + D + ++Y RN IFPGS L KKPP Sbjct: 549 QLRPGAALNDETDFEGVHKALLSGLLGQVAQLD-EGRKYNATRNRSVQIFPGSVLHKKPP 607 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVY 725 KW++ AE+VETS+++ R A IDP+W+ + ++KR + EP W+ G VMA E+VT+Y Sbjct: 608 KWLVAAEVVETSQVYARQCAAIDPKWLLRINPQILKRHHYEPAWQMRSGRVMAIERVTLY 667 Query: 726 GLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRR 785 GL I +++++ +++ RE+FIR LV GD++ AF + NL EV++LE ++RR Sbjct: 668 GLTISDGQRIHFGEVNSVAAREIFIRDGLVLGDYRKPPAFLKANLHSIKEVQDLESRTRR 727 Query: 786 RDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISK 845 RD+LVD++ LF+FYD+RI +SA + W K+++ L ++S ++ + Sbjct: 728 RDLLVDEQALFDFYDERIPAQCVSASSLEKWVKQLA--DDKQLRLDQSQILTRDPGEAIA 785 Query: 846 LDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIA 905 +P+ RL Y+FEPG + DG++V +PLPLLN+ FEW +PGL RE IA Sbjct: 786 DQFPSELEWREATYRLKYRFEPGKENDGISVTVPLPLLNRAPRYRFEWLVPGLLREKCIA 845 Query: 906 LIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQV 965 L+K LPK R+ VP P+ +A L ++ ++ L +L LRR GV + EDW + Sbjct: 846 LVKGLPKACRKQLVPVPDVVDAALASMQADDVALCSALSAALRRTRGVAIADEDWDIAGL 905 Query: 966 PDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQL 1025 + + RVVD++ K L +GR + L + + + Q + WSFG L Sbjct: 906 AELYRANIRVVDERGKLLAQGRDMAALVAQFRNGADVERLSEPSNSPAQHQVKSWSFGDL 965 Query: 1026 PESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYL 1085 P + KV+ +PALVD D +A++L D + + G+ L + +KYL Sbjct: 966 PNIWRTTAAGMKVERFPALVDHGDRIAVELHDYQPDAELLHRRGVAALAMSCSSQTVKYL 1025 Query: 1086 HEKLPNKAKLGLYFNPYG-KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 ++L K L G L+ + I + ++ D E F ++ + Sbjct: 1026 RKQLFADNKASLALAGSGLDRSVLVRETIMASLLEIWDET--LPRDEAAFTRGLNAIKGQ 1083 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 T + + + L + K LK +DI Q+ L+ GF+ N Sbjct: 1084 WVSTALAKEQVMINFLLPLAEAQKHLKQLTKTEFTAARADISGQIQCLLEPGFMVMNPGY 1143 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 L RY +A+ R+++L +D+ + +E + P + Sbjct: 1144 WLEQYPRYGKALLHRIQRLNGQTEKDQKSLRLLEPSLTRLSEAAANYPGLSGLSPPALQY 1203 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RWM+EE RVS FAQQLGT P+S KR+ + +++ Sbjct: 1204 RWMLEEFRVSLFAQQLGTRLPVSSKRLDEQWQKV 1237 >UniRef50_C7NIQ1 ATP-dependent helicase HrpA n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ1_KYTSD Length = 1331 Score = 1390 bits (3598), Expect = 0.0, Method: Composition-based stats. Identities = 644/1323 (48%), Positives = 845/1323 (63%), Gaps = 111/1323 (8%) Query: 82 KKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANR 141 +K D+ AIRDHQVV+VAGETGSGKTTQLPKIC+ELGRG+ G+IGHTQPRR+AAR+VA+R Sbjct: 4 RKDDLAAAIRDHQVVVVAGETGSGKTTQLPKICLELGRGVTGMIGHTQPRRIAARSVADR 63 Query: 142 IAEELKTEP---GGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 IA EL E G +GY+VRF+D S T+VK+MTDGILL ++Q DR L YDT+IIDE Sbjct: 64 IAHELGVELEDPQGPVGYQVRFTDLSSPTTLVKVMTDGILLNQMQFDRDLRAYDTLIIDE 123 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-----NNAPIIEVSGRT 253 AHERSL IDF+LGYL++LLPRRPDLK+IITSATIDPERF+ HF N API+EVSGRT Sbjct: 124 AHERSLTIDFILGYLQQLLPRRPDLKVIITSATIDPERFAHHFADAEGNPAPIVEVSGRT 183 Query: 254 YPVEVRYRPIVEEA------------------DDTERDQLQAIFDAVDELSQESHG---- 291 YPVE+RYRP+ + + + DQ+ I AV EL E G Sbjct: 184 YPVEIRYRPLSLQETSNVAALADPEGYDETVYGEDDIDQVTGIGQAVQELWTEVIGPDDP 243 Query: 292 -----DILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 DIL+F SGEREIRD +AL L L TEI+PLY RLS++EQ RVF HS RR+VL Sbjct: 244 RPQDRDILVFCSGEREIRDATEALEGLKLPGTEIVPLYGRLSSAEQQRVFAPHSTRRVVL 303 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATNVAETSLTVPGI+YV+D GTARISRYS R KVQRLPIE IS+ASANQR GR GRVS G Sbjct: 304 ATNVAETSLTVPGIRYVVDTGTARISRYSQRLKVQRLPIEKISRASANQRAGRSGRVSAG 363 Query: 407 ICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 ICIRLYS++DF +RPEFTDPEI RT+LASVILQM LGLGD+ F FV+ PD R I DG+ Sbjct: 364 ICIRLYSQEDFEARPEFTDPEIQRTSLASVILQMAHLGLGDVQRFGFVDPPDPRQITDGL 423 Query: 467 RLLEELGAITTD--EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 RLL ELGA+T + + LTP GR+L+ +P DPRLARM+LEA + G + E ++I + Sbjct: 424 RLLHELGAVTRETASRGGVVTLTPEGRELASIPADPRLARMLLEAHRRGALAEVLVIVAG 483 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LSIQDPRERP +K++ +D+ H RF D+ SDF+A +NLW Y E++ +LS +AFRRLCR + Sbjct: 484 LSIQDPRERPAEKRERADQLHARFKDENSDFVALLNLWQYARERKGSLSGSAFRRLCRAE 543 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNS------------------EPAEYREIHIAL 626 +L+YLR+REW D++ QLR VVK LG +S +PA+ +H +L Sbjct: 544 FLHYLRLREWVDVHHQLRSVVKGLGWQDSSLGLESDRTRQRDHGFAPVDPAKAEVVHRSL 603 Query: 627 LTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAAR 686 L GLLS +G++D + ++Y GAR A FSI PGSGLF+ P W+M AELVET+RLW R A Sbjct: 604 LPGLLSQVGLRDRETRDYLGARGAHFSIQPGSGLFRTRPDWIMSAELVETTRLWARTNAT 663 Query: 687 IDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCR 746 +DP WVE A HL+KR YSEP W + + +A E+VT+ G+P+VA R+V + +D L R Sbjct: 664 VDPAWVEEAADHLVKRQYSEPRWSAKRASAVADERVTLLGIPLVAGRQVGLATVDAPLAR 723 Query: 747 ELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHD 806 ELFIRHALVEGDWQT HAF+ N K+ AEVE+LE +SRRRD+L DDE LF FYD+R+ + Sbjct: 724 ELFIRHALVEGDWQTGHAFWGHNKKVLAEVEQLEARSRRRDLL-DDEALFAFYDERLPAE 782 Query: 807 VISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFE 866 V+SA HFDSWWK R P LL+ ++ E + + D+P W QG+++L L+YQFE Sbjct: 783 VVSAAHFDSWWKSHRRTEPHLLDLSVEEVVGEDSSGVDLADFPATWVQGDVELPLTYQFE 842 Query: 867 PGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAE 926 PG +ADGVT H+ L LN+V + GF+WQ+PGLR EL +AL++SLPK VRR+FVPAP++A Sbjct: 843 PGTEADGVTAHLTLSQLNRVRDEGFDWQVPGLREELAVALLRSLPKAVRRSFVPAPDHAA 902 Query: 927 AFLGRVKP---------------LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKI 971 A L + +L L R TG +D D VP HL++ Sbjct: 903 AALKDLSEQLADAPTGTATEPMRGSGTFAAALAGALTRRTGTPLDPADMDTAAVPAHLRM 962 Query: 972 TFRVVDD----KNK----------------------------KLKEGRSLQDLKDALKGK 999 TFRV +D + L EG L L+ L G Sbjct: 963 TFRVTEDAPGEGGRVPGGKGAGGGAPRGKGSRGRRGPRQRPTVLAEGNDLTALQAQLAGS 1022 Query: 1000 VQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP 1059 +QE ++ A G+ SGL W+ +LP ++ G V+ WPALVDE + +++F +P Sbjct: 1023 LQEAVAGAA-AGLTASGLTSWTLDELPAHFD--DGG--VQGWPALVDEGTTAGVQVFADP 1077 Query: 1060 LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDK 1119 + GLRRL+L P + + N+ KL L P+G L++D ++ VD Sbjct: 1078 RQAAHEHALGLRRLVLAGFNPPWNRILRSVDNQTKLALGAAPHGSTQALLEDALAAAVDS 1137 Query: 1120 LI---DANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 +I A G V T E F + + ++++ ++L V + + ++ Sbjct: 1138 VIAERLAAAGTVRTREAFEQVQATAVQQAAPRILEMVGAAGKVLAGVPAVERAVESMTAP 1197 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 +A D+ AQ+ GLV+ GF+T G++++ RYLQA+E+R K D RD ++ Sbjct: 1198 RLAPLREDLTAQLRGLVHPGFLTHAGYEQVRHLPRYLQAMEQRAAKAPTDLARDTERLAV 1257 Query: 1237 VENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 V+ V++ + L R DV+ +RWM EELRVS FAQQLGT + +S+KRI AM+ Sbjct: 1258 VQTVERERADLLAGLDELERLRPDVRALRWMTEELRVSLFAQQLGTAHAVSEKRIYAAMD 1317 Query: 1297 QIS 1299 + Sbjct: 1318 AVE 1320 >UniRef50_D1BIN2 ATP-dependent helicase HrpA n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BIN2_SANKS Length = 1560 Score = 1387 bits (3591), Expect = 0.0, Method: Composition-based stats. Identities = 662/1481 (44%), Positives = 859/1481 (58%), Gaps = 221/1481 (14%) Query: 23 DRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQK 82 D R R G ++ + A+ +D P I +P+ LPVS + Sbjct: 92 DERRGKDRRTGDRRPRVDHARLERAAAARTAVD------------LPPIVFPEQLPVSAR 139 Query: 83 KQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRI 142 ++DI AIRDHQVVIVAGETGSGKTTQLPKI +ELGRG G IGHTQPRR+AARTVA RI Sbjct: 140 REDIAAAIRDHQVVIVAGETGSGKTTQLPKIALELGRGRAGQIGHTQPRRIAARTVAERI 199 Query: 143 AEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202 AEE+ T G +GY+VRF+D S+NT+VK+MTDGILLA+IQ+D L+ YDT+IIDEAHER Sbjct: 200 AEEIGTPLGEIVGYQVRFTDTSSENTLVKVMTDGILLAQIQRDPQLLAYDTLIIDEAHER 259 Query: 203 SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------------------- 243 SLNIDF+LGYL +LLP+RPDLK+IITSATID +RF+RHF Sbjct: 260 SLNIDFILGYLTQLLPQRPDLKVIITSATIDSDRFARHFAPRDAQDAAKAAAQTEPVDGT 319 Query: 244 ----------APIIEVSGRTYPVEVRYRPIVEE----ADDTERDQLQAIFDAVDELSQES 289 AP++ V+GRT+PVEVRYRP+ E ERD + I DAVDEL E Sbjct: 320 DDTSADDAPMAPVVSVTGRTFPVEVRYRPLTPEDSSAKKGAERDLMTGICDAVDELCAEG 379 Query: 290 HGDILIFMSGEREIRDTADALNK---------LNLRHTEILPLYARLSNSEQNRVFQSHS 340 GDIL+F+SGEREI D DAL H EI+PLYARLS +EQ+RVFQSH Sbjct: 380 PGDILVFLSGEREILDAQDALASHLGARVNDPRRPDHVEIMPLYARLSAAEQHRVFQSHP 439 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 GRR+VL+TNVAETSLTVPGI+YV+DPGTARISRYS TKVQRLPIEPI+QASANQR GRC Sbjct: 440 GRRVVLSTNVAETSLTVPGIRYVVDPGTARISRYSKATKVQRLPIEPIAQASANQRSGRC 499 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEA 456 GRV++GI IRLYSEDDFLSRPEFT+PEILRT+LASV+LQM ++G+ D+A FPFVE Sbjct: 500 GRVADGIAIRLYSEDDFLSRPEFTEPEILRTSLASVLLQMISVGVVRTPDDVARFPFVEP 559 Query: 457 PDKRNIQDGVRLLEELGAI---------------------------------TTDEQASA 483 PD R I+DGV+LL ELGA+ Sbjct: 560 PDTRAIRDGVQLLTELGALETRKPERRGATSRPAGTHVEGGSSAPSDERASRDALGSGGG 619 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +LT GR ++QLP+DPRLARM++E + G RE MII +ALSIQDPRERP +++ +D+ Sbjct: 620 TRLTETGRAIAQLPMDPRLARMIVEGGRRGAAREVMIIAAALSIQDPRERPTEQRAQADQ 679 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 +H RF D SDFL+++NLW Y QQ+ LSS+AFRRLCR ++LN+LR+REWQD+ QLR Sbjct: 680 QHARFTDPTSDFLSYLNLWEYARAQQRDLSSSAFRRLCRAEHLNFLRIREWQDVVGQLRD 739 Query: 604 VVKELGIPVNSEPA--------------------EYREIHIALLTGLLSHIGMKDAD--- 640 + K LGI +N+ + IH +LL GLLS IGM++A Sbjct: 740 MSKPLGIVMNAPGRRSGGSSTDEPVADLDLRQTWDGDTIHQSLLAGLLSQIGMQEATEVK 799 Query: 641 -------------------KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 + EY GAR ARF+IFPGSGL KKPP WVM ELVETSRLWG Sbjct: 800 ASAVKGRETAADRRAKKFARNEYLGARGARFAIFPGSGLAKKPPVWVMAGELVETSRLWG 859 Query: 682 RIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQID 741 R A+I PEW E +A HL+KRTYSEPHW QGA A EKV +YG+PIVA RKV +S++D Sbjct: 860 RDVAKIQPEWAEDLAAHLVKRTYSEPHWSSKQGAAQAIEKVLLYGVPIVADRKVLFSKVD 919 Query: 742 PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQ 801 P RELFIRHALV+G+W T H F+ +N +L E ELE +SR+R ++VDD+ LF FYD+ Sbjct: 920 PEQARELFIRHALVQGEWTTHHTFYADNRRLLDEAAELEARSRQRGLVVDDDALFAFYDE 979 Query: 802 RISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRL 861 R+ V+SARHFD WWK RE PDLL F +L+ EG E +S D+P W QG+L L L Sbjct: 980 RVPASVVSARHFDQWWKSARREDPDLLTFTLDLLVPEGTE-VSAEDFPQEWVQGDLTLPL 1038 Query: 862 SYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPA 921 +YQF+PG DADGVTVH+P+ +LN+V GF+W +PGL EL A I++LPKPVR VPA Sbjct: 1039 TYQFQPGTDADGVTVHVPISVLNRVVPDGFDWMVPGLLDELTTATIRALPKPVRVQLVPA 1098 Query: 922 PNYAEAFLG-------------RVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDH 968 P+ A + R + + R ++ + V V + W +++P H Sbjct: 1099 PDVARGVVAWIRENTPAWGDVTRAGDMAESYESAFTRAVKALRDVDVPEDAWDRERLPGH 1158 Query: 969 LKITFRVVDDKNK---------KLKEGRSLQDLKDALKGKVQETLSAVADDGI------- 1012 L++TFRV +++ L E + L L+ L + Q + + + Sbjct: 1159 LRMTFRVFEERGGRGSGPRGEVVLDESKDLVALQRRLAAQSQAAVRSAVKSAVGTALREA 1218 Query: 1013 ---------------------------------------------EQSGLHIW----SFG 1023 E + L W G Sbjct: 1219 QQEAQDAAAASQKAGTGAPGAAAATGGPTAPAASTPDAPTGVTVAEVASLATWPSALPDG 1278 Query: 1024 QLPESYEQK-RGNYKVKAWPALVDER----DSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 LP + G V+ +PALV+ER +VA+++ + Q+ G+RRLLL Sbjct: 1279 VLPAQVDTPGPGGMVVRGYPALVEERSGSTTTVALRVLADASRQEVEHTRGVRRLLLGET 1338 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALH 1138 + + L L +PY L+ D V + + + G V + A+ Sbjct: 1339 ALQQSRITSRWSGTQSLTLAASPYKNTGALVADLQLAAV-QCLTPDAGQVRDLAAYTAMR 1397 Query: 1139 EKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFV 1198 V+ L + + + V LTA ++ ++ + + L+D++ + GLVY GFV Sbjct: 1398 TAVKKALEEEIHTVVGHVVAALTAARTVDGEIRSSSSLALLNTLADVRDHVAGLVYDGFV 1457 Query: 1199 TGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRED 1258 RL RYL+A RLEK A +P+RD KV +V+ A+ R + Sbjct: 1458 AATPPGRLPHLARYLRAASYRLEKAASNPNRDAELAWKVHDVEDAYDAARAAYAAGRPDP 1517 Query: 1259 E---DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 ++ + RWMIEELRVS FAQQLGT P+S+KRI + + Sbjct: 1518 ARASELAQARWMIEELRVSLFAQQLGTDGPVSEKRIRKLLA 1558 >UniRef50_A4SYB1 ATP-dependent helicase HrpA n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYB1_POLSQ Length = 1330 Score = 1380 bits (3573), Expect = 0.0, Method: Composition-based stats. Identities = 569/1325 (42%), Positives = 802/1325 (60%), Gaps = 96/1325 (7%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI---KG 123 + EI +P+ LPVS ++Q I +A++ HQVVIV GETGSGKTTQLPKIC++LGRG Sbjct: 8 RKLEIRFPEELPVSGQRQIIKDALQSHQVVIVCGETGSGKTTQLPKICLDLGRGTINGGK 67 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRR+AA A RIA+EL + G +GY+VRF+D S + +KLMTDGILLAE Q Sbjct: 68 LIGHTQPRRIAATATAKRIAQELGSPIGQDVGYQVRFADKTSHSASIKLMTDGILLAETQ 127 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-- 241 +D L YDT+IIDEAHERSLNIDFLLGYL++LLP+RPDLK+IITSATID +RF+ HF Sbjct: 128 RDPQLRAYDTLIIDEAHERSLNIDFLLGYLRQLLPKRPDLKLIITSATIDAQRFAEHFAI 187 Query: 242 --NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE----------S 289 AP+IEVSGR +PVE RY P+ +A + +A + D +++E Sbjct: 188 NGKVAPVIEVSGRLFPVEQRYSPLEPDAKPDGKKASKAAKEISDAVTEEIASLWREGAAG 247 Query: 290 HGDILIFMSGEREIRDTADALNKLNLR----HTEILPLYARLSNSEQNRVFQSHSGRRIV 345 GD+L+F+ GEREIRD A+AL K ++ H EIL L+AR S +EQ RVF +GRRI+ Sbjct: 248 SGDVLVFLPGEREIRDCAEALRKDHVLQQRFHPEILSLFARQSVAEQERVFSPGNGRRII 307 Query: 346 LATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSE 405 L TNVAETSLTVP I+YVID G AR+ RYSYR KV++L IE ISQA+ANQR GRCGRVS+ Sbjct: 308 LTTNVAETSLTVPNIRYVIDSGLARVKRYSYRNKVEQLQIESISQAAANQRAGRCGRVSD 367 Query: 406 GICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 GIC+RLYSE D+ SR +FTDPEILR++LASV+L+M++L L I FPF++ P R I DG Sbjct: 368 GICVRLYSELDYQSRSQFTDPEILRSSLASVLLRMSSLRLPKIQHFPFIDKPLGRAIADG 427 Query: 466 VRLLEELGAITTDEQ--------ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 V+LL+ELGAI DE +++KLT +G+QL+ LP+DP + RM+L A++ ++E Sbjct: 428 VQLLDELGAIEFDESEPADGKDINNSFKLTAIGKQLADLPLDPCIGRMLLAAKEQNALKE 487 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALSSNA 576 II SAL+ QDPR+RPMD+ A+D+ H +F D+ S+FL+FV LWN+ + Q S+ Sbjct: 488 VTIIASALATQDPRDRPMDQATAADQAHLQFADERSEFLSFVKLWNWYQDALQHKHSNRQ 547 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 LC++ +L+ R+REW+DI+ QL ++ E G N A Y ++H++LLTGLL ++ Sbjct: 548 LETLCKSKFLSPRRLREWRDIHGQLHTMLGEKGWKENGLAATYEQVHLSLLTGLLGYVAK 607 Query: 637 KDADK---------QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 K+ D+ Y GAR R I+PGS + KK W++ EL ET+R++ R A+I Sbjct: 608 KEEDEKSQDRNSKTGGYVGARGIRPFIWPGSTIGKKAGAWILAGELQETNRMYARTIAKI 667 Query: 688 DPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRE 747 +P+WVE VA H + ++ S+P W+ QG VMA E+ T+YGLPI R+V Y +P RE Sbjct: 668 EPQWVERVAAHRLIKSLSDPFWDNRQGEVMAFERGTLYGLPIYHGRRVRYEPHNPDETRE 727 Query: 748 LFIRHALVEGDWQTRHA---------------------FFRENLKLRAEVEELEHKSRRR 786 LFIR ALV+ + R FF N +L E+E LEH+SRR Sbjct: 728 LFIRQALVQEEMFGRMDTPALQRETETDAKKKYPNLFNFFWHNRRLIKEIEALEHRSRRP 787 Query: 787 DILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKL 846 D+LVDD+ LF FYD RI +V S +W+ K L EK+ L++ A I+ Sbjct: 788 DVLVDDDLLFAFYDSRIPKEVRSRESLKAWFSKDPELDSQ-LRLEKADLMRHEAAGITVD 846 Query: 847 DYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIAL 906 YP G +L L+Y FEPG+ DGVT+ +PL LNQV+ EW +PG+ E V L Sbjct: 847 RYPKNMLVGGAQLSLTYHFEPGSPKDGVTLVVPLTQLNQVDGRRCEWLVPGMCEEKVHLL 906 Query: 907 IKSLPKPVRRNFVPAPNYAEAFLGR----VKPLELPLLDSLERELRRMTGVTVDREDWHW 962 +KSLP+ +RR+ VP P+YA++FL R + LDSL ++R+ G+ + R D+ Sbjct: 907 LKSLPQKLRRHCVPLPDYAKSFLERKLEEKQFGVGDFLDSLISDIRKERGLEIKRTDFRP 966 Query: 963 DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVAD------------- 1009 + +P H + FR++D+ ++L+ R+L L+ + A+A Sbjct: 967 ESLPLHSSMNFRLIDEHGRQLEVERNLSRLRSEYGETARSAFQAIAQETAQVELGVEPTQ 1026 Query: 1010 ------------DGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 +EQ G W FG+LPE+ E ++GN + +PALVD D +++FD Sbjct: 1027 KAGSNSSNEANARKVEQGGYRAWEFGELPETLEIQKGNKTLFGYPALVDRIDYCDLEVFD 1086 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGV 1117 + LE ++ GLRRL L+ +K L ++LP +LGL F G V LID ++ + Sbjct: 1087 DLLEARKQHALGLRRLFALSNKDTLKALQKQLPGIRELGLLFINVGSVEGLIDHILNLAL 1146 Query: 1118 DKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 ++ PV E F + + L +I++ L A ++ K++ Sbjct: 1147 ERAFMGESLPV-NAEQFTERLQAGKPRLALIAQEISRHALNALQAHADLQKKI-ASAKAA 1204 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 +DI+AQM GL++ FV + +L RYL+AI R++KL +P RD Sbjct: 1205 SPSAYADIQAQMQGLIFPKFVADIPYAQLVHVPRYLKAIAMRIDKLRSNPSRDAQCQKDW 1264 Query: 1238 ENVQQAWQQWINKLPPARR----EDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 E+V + WQ+ + A ED+ + + RW +EELRV+ +AQ+L TP P+S KR+ + Sbjct: 1265 ESVARPWQKLMQGNKGAASYAMTEDQALTDFRWQLEELRVALYAQELKTPTPMSLKRLEK 1324 Query: 1294 AMEQI 1298 + + Sbjct: 1325 VLASL 1329 >UniRef50_D0WKL4 ATP-dependent helicase HrpA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WKL4_9ACTO Length = 1331 Score = 1379 bits (3571), Expect = 0.0, Method: Composition-based stats. Identities = 605/1340 (45%), Positives = 798/1340 (59%), Gaps = 113/1340 (8%) Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 + R+ + P I YPD LPVS ++ +I AIRD+QVV+VAGETGSGKTTQLPKIC+ELGRG Sbjct: 1 MEARKRSVPNIAYPD-LPVSARRDEIARAIRDNQVVVVAGETGSGKTTQLPKICLELGRG 59 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 +IGHTQPRR+AAR VA+R+A EL + G +GY+VRF++ VS T+VKLMTDGILLA Sbjct: 60 TSAMIGHTQPRRIAARAVADRLAHELGVDLGAQVGYQVRFTEEVSPGTLVKLMTDGILLA 119 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ D L +YDTIIIDEAHERSLNIDFLLGYL LLPRRPDLK+IITSATID +RF++H Sbjct: 120 EIQSDPELARYDTIIIDEAHERSLNIDFLLGYLARLLPRRPDLKVIITSATIDTQRFAKH 179 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 F NAP++EVSGRTYPVE+RYRP+V + DQ+ I +A +EL E GDIL+F+SGE Sbjct: 180 F-NAPVVEVSGRTYPVEIRYRPLVGDDGGEATDQVSGIVEACEELMAEGPGDILVFLSGE 238 Query: 301 REIRDTADALNKLNLRH-------------TEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 EIRD A R E+LPLY+RLS +EQ+R+F+ RRI+LA Sbjct: 239 GEIRDAQAAFADELGRRHIEPGGRSSVPDAVEVLPLYSRLSAAEQHRIFERRPHRRIILA 298 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETSLTVPGI+YV+DPGTARISRYS RTKVQRLPIEPISQASANQR GR GRV++GI Sbjct: 299 TNIAETSLTVPGIRYVVDPGTARISRYSARTKVQRLPIEPISQASANQRAGRSGRVADGI 358 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLYS++DF R +FT PEI RT+LASVILQM ALGLG++A FPF++ P++R ++ G + Sbjct: 359 CIRLYSQEDFDGREKFTQPEIQRTSLASVILQMLALGLGNVADFPFIDPPEERAVRAGAQ 418 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL E+GAI +LTP+GR+L++LP+DPRL RM+LEA K+GC E +++ +ALS+ Sbjct: 419 LLTEIGAID------GARLTPVGRRLARLPIDPRLGRMLLEADKNGCASEVLVLVAALSV 472 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 QD RERP +K+ +D+ H RF + SDFLA++ LW YL Q++ LS +AFRR+CR ++LN Sbjct: 473 QDVRERPAEKRPQADQLHARFTARSSDFLAYLTLWRYLNTQRRELSGSAFRRMCRAEFLN 532 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNS--------------------------------- 614 YLR REW D+ QLRQ+ K LGI S Sbjct: 533 YLRFREWADVVAQLRQLAKPLGIDAASIGLPGRAQIRQAGENGAPALGGAPNSGAAAAAC 592 Query: 615 -------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKW 667 + E IH ++L GLLS++G ++Y GAR A F I+PGSGL K+ P W Sbjct: 593 RDFGRGADTPEAGAIHRSMLVGLLSNLGNYSQRSRDYEGARGAHFVIWPGSGLSKRTPAW 652 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 VM AELVETSRL+ R A I+P+W+EP+A++L+KRTYSEP W GA M EKVT+YG+ Sbjct: 653 VMAAELVETSRLFARTVAAIEPQWIEPLAKNLVKRTYSEPFWSSRNGAAMCKEKVTLYGM 712 Query: 728 PIVAARKVNYSQ----IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKS 783 + A R V + RE+FI H LVEGDW+T HAF ++N + E ELE K Sbjct: 713 TLAADRPVLLASTGSESAREEAREMFILHGLVEGDWRTHHAFLKDNERALEEARELEEKM 772 Query: 784 RRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKI 843 RRR ++ E L FYD+RI V+S RHFDSWWKK R+ P LL+F + +L+ E + Sbjct: 773 RRRGLVAGPEALAAFYDERIPDFVVSGRHFDSWWKKAKRDDPHLLDFTQELLVGE--AEA 830 Query: 844 SKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELV 903 + DYP W QG ++L + Y F PGA ADGVTV IP+ LL QV GF+W +PG+R +LV Sbjct: 831 DENDYPAEWRQGEIRLPIEYSFSPGAYADGVTVTIPVTLLPQVRPEGFDWLVPGMREDLV 890 Query: 904 IALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL---------PLLDSLERELRRMTGVT 954 I++LPK VRR VPAP+ A L + E + + R+ G Sbjct: 891 TGTIRALPKRVRRQLVPAPDVARQILPLLPRWEDVAHGQEGAPSFRRAFAEAVFRLRGFW 950 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 +D W ++P+HL + FRV ++ L E SL+ LK L + + + +V + Q Sbjct: 951 IDDAAWEEARLPEHLSVLFRVRSERGAVLDESTSLERLKLELAPRTRSAVESVVKGAVAQ 1010 Query: 1015 S-------------------------GLHIWSFGQLPESYEQKRG-NYKVKAWPALVDER 1048 + G S G +P S E V+ +PAL Sbjct: 1011 ALDEAHFRLAGGAAEGAALPLGESLGGWPDASGGVIPTSVETTGAHGMTVRGYPALAAGA 1070 Query: 1049 DS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 D V + + +P Q + GL LL I P + + P L L +PY Sbjct: 1071 DGKVRLDVLADPALQAREHRRGLAALLAAAIALPETRITSRWPGAQALALAGSPYPDTSA 1130 Query: 1108 LIDDCISCGVDKLIDA-------NGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQIL 1160 L+ D L + V T + L + D V I+ V I Sbjct: 1131 LVADIQLASARNLAAKWAAENGLDVADVRTRSQWDELRAWAKQRHEDEVYRISLDVAGIC 1190 Query: 1161 TAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRL 1220 ++K + + L+D+K Q+ LV GFV+ RL RYL+A R+ Sbjct: 1191 ARRAEVDKWITESRSPALLATLADVKEQVANLVPSGFVSRTPAARLPHIERYLRAAYIRI 1250 Query: 1221 EKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRED---EDVKEIRWMIEELRVSYFA 1277 +K A +P D A ++++V + + + E RWM+EELRVS FA Sbjct: 1251 QKAATNPSGDDALAWQIQDVNDKVEAARAAAASRAYDPSAAAALDEARWMVEELRVSLFA 1310 Query: 1278 QQLGTPYPISDKRILQAMEQ 1297 QQLGT +S KRI + + + Sbjct: 1311 QQLGTNGKVSAKRIAKVLAR 1330 >UniRef50_A9GK92 ATP-dependent helicase HrpA n=2 Tax=Myxococcales RepID=A9GK92_SORC5 Length = 1263 Score = 1374 bits (3558), Expect = 0.0, Method: Composition-based stats. Identities = 543/1268 (42%), Positives = 767/1268 (60%), Gaps = 13/1268 (1%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVI 97 P + QE G+ A+ + +P+ LP+S + +DI AI HQVVI Sbjct: 4 PRPTVSHRVPQEQPPAPPSPGGRTSSPPASGGPVRFPEELPISARVRDIARAIEAHQVVI 63 Query: 98 VAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYK 157 VAGETGSGKTTQLPKIC+ +GRG+ IG TQPRR+AA +VA R+A+EL E G +GYK Sbjct: 64 VAGETGSGKTTQLPKICLAMGRGLSARIGVTQPRRIAATSVAARVAKELGVELGKEVGYK 123 Query: 158 VRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL 217 +RFSD S T VK MTDGI+LAEIQ D L YDT+IIDEAHERSLNIDFLLGYLK LL Sbjct: 124 IRFSDRTSPATYVKYMTDGIVLAEIQGDPRLSGYDTLIIDEAHERSLNIDFLLGYLKRLL 183 Query: 218 PRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQA 277 P+RPDL++I++SAT++ +RF+ +F AP+IEVSGRTYPVEV +R + Sbjct: 184 PKRPDLRVIVSSATLETDRFAAYFGGAPVIEVSGRTYPVEVIHRRPESGEAEVADAVAAT 243 Query: 278 IFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQ 337 + + S + GDIL+F+ GEREI DT L + L HT +LPLY RL S+Q RVFQ Sbjct: 244 VEEIT---SIDPRGDILVFLPGEREIHDTMAELTRHGLPHTTLLPLYGRLPQSDQQRVFQ 300 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 S GRRIVLATNVAETSLT+PGI YVID G AR++RYS RT V +L IEPIS+ASA+QRK Sbjct: 301 SLPGRRIVLATNVAETSLTIPGIVYVIDSGLARVNRYSPRTGVTQLQIEPISRASADQRK 360 Query: 398 GRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 GR GRV G+C RLY E D +RP +TDPEILR L+ VILQM ALGLG I FPF++AP Sbjct: 361 GRAGRVQSGVCFRLYDEQDDRARPAYTDPEILRVGLSGVILQMKALGLGAIEDFPFLDAP 420 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 KR + +G R+LEELGA+ A +LT +GR+L++LP+DPRL RMVL + G + E Sbjct: 421 SKRAVDEGYRVLEELGALDD-----AGELTDIGRKLARLPLDPRLGRMVLGGESEGALAE 475 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAF 577 +II +AL +QDPRERP+ Q+ +D+ HR+F D+ SDF+ + LW++ + Q L+ N Sbjct: 476 VLIIAAALGVQDPRERPLAAQKQADDAHRKFKDEASDFVGLLKLWSFYQDAQGRLTQNQL 535 Query: 578 RRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMK 637 R+ CR +++YLR+REW D++ Q+ ++ KE+G N PA+ IH ALL GLLS IGM Sbjct: 536 RKACRDHFVSYLRMREWADVHRQISRITKEMGFSPNDAPAKGDAIHRALLPGLLSRIGMW 595 Query: 638 DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 + + + Y GAR RF + P SGL KKPP W+M AELVETS+L+ R+AA +DP W+E A Sbjct: 596 NQENKVYLGARQTRFQLHPSSGLAKKPPAWIMAAELVETSQLFARMAAALDPAWIEAAAG 655 Query: 698 HLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEG 757 L KR++S+PHW AVMA E+VT+YGLPI R+V++ IDP R++F+ HALV Sbjct: 656 PLCKRSHSDPHWAAKPAAVMAREQVTLYGLPIARDRRVDFGAIDPKSARQIFLVHALVRQ 715 Query: 758 DWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWW 817 ++ TR F N +L EV L K+RR ++L D+ L F+D+R+ V S + F++W Sbjct: 716 EYATRAPFMEANRRLFEEVSRLRDKARRSEMLADEHALELFFDRRVPEGVYSGKTFEAWR 775 Query: 818 KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVH 877 K+ E P L+ + ++ + A ++ +P+ + LSY+F+PG D DG+++ Sbjct: 776 KEAEAEDPRALHLSLADVLLDEAADLTPERFPDSLDLYGAAVPLSYRFDPGEDDDGISLS 835 Query: 878 IPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL 937 +PL LL Q + EW IPG E + L++SLPK +R+ VP A ++P + Sbjct: 836 LPLVLLPQADPDELEWMIPGWHAEKIAQLLESLPKSLRKALVPLREVAREIAAELRPFQG 895 Query: 938 PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALK 997 PL +L R + T V + + +P +L+ FRV+D+ + + EGR L++LK+ L Sbjct: 896 PLRPALARAVEDRTAERVPADAFRPQDLPPYLRFYFRVLDEDGRVIGEGRELRELKERLS 955 Query: 998 GKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 G+ +E + V G+E+ GL +S LPE + G +KV +PAL+D SV++++ Sbjct: 956 GRAREAWARVGKAGLERDGLTSFSVEALPERVQVDAGRHKVFGYPALIDGETSVSVRVLA 1015 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVL-ELIDDCISCG 1116 + +A GLRRLLLL + + L + L + + L Sbjct: 1016 SRAAAAEATRAGLRRLLLLQLGGKMSQLEQPLRSAVAVSGLGAKVAPGEPGLARQIALRA 1075 Query: 1117 VDKLIDAN--GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRV 1174 +D+ G T+ F A +K R L + +A +I + + L+ Sbjct: 1076 LDEAFQLGDPGAFPRTKAAFQARLDKGRGSLQGVLGKLAGLAREIGVELDRVQAMLRSMT 1135 Query: 1175 DMTMA--LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1232 A L D++ Q+ L+ G + RL RYL+A + RLE+L P +D++ Sbjct: 1136 GKPGAPRPALDDVRTQVDFLLPVGLFSRAPIDRLAHLPRYLRAAQIRLERLPNGPQKDQS 1195 Query: 1233 QMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 + +V Q + + L E+++ RW+IEELRVS FA +L P+S +R+ Sbjct: 1196 KAAQVLPFWQDYLKHQQGLRDKGVPAEELESFRWLIEELRVSLFAPELKAAVPVSPQRLT 1255 Query: 1293 QAMEQISG 1300 + +++ G Sbjct: 1256 EQWKRLLG 1263 >UniRef50_B8FCF5 ATP-dependent helicase HrpA n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCF5_DESAA Length = 1357 Score = 1374 bits (3558), Expect = 0.0, Method: Composition-based stats. Identities = 514/1329 (38%), Positives = 763/1329 (57%), Gaps = 42/1329 (3%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVK-NPDAQQAIFQEMAKEIDQAAG 59 + + K +++ RL M RDR R+L ++ K + D + + ++ + Sbjct: 38 LVRKNKRKEQSIRSRLPKAMGRDRHAILRQLDRLRSPKISLDKKSKTLSALQNQVAFSLK 97 Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + LRE +RP YP+ LP+S + ++I+EAI+++QVV++ GETGSGKTTQ+PK+C+ GR Sbjct: 98 ERKLREKSRPSFAYPEELPISGRSEEIVEAIQENQVVVITGETGSGKTTQIPKMCLAAGR 157 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDH--VSDNTMVKLMTDGI 177 G+ GLIG TQPRR+AA TVA RIAEEL + G +GYK+RF + S+ +K+MTDG+ Sbjct: 158 GVDGLIGCTQPRRVAAVTVAQRIAEELGEDLGKSVGYKIRFKETGGKSEAPFIKIMTDGV 217 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE Q D +YDTII+DEAHERSLNIDF+LG LK LLP+RPDLK+IITSATID E+F Sbjct: 218 LLAEFQHDPFFTKYDTIIVDEAHERSLNIDFILGILKNLLPKRPDLKVIITSATIDTEKF 277 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD-TERDQLQAIFDAVDEL-SQESHGDILI 295 S+ FN+API+EVSGR YPVEVRY P++ D+ ++ + AV+ + S+ GDIL+ Sbjct: 278 SKAFNDAPIVEVSGRMYPVEVRYEPLLTSGDENSDAGYVDGAVRAVETIFSRRPKGDILV 337 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 FM E +IR+T D L + ILPL+ RL+ EQ RVF HSG ++V+ATNVAETS+ Sbjct: 338 FMPTESDIRETCDLLQARRFPNALILPLFGRLAGGEQARVFARHSGIKVVVATNVAETSI 397 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+PGI+YV+D G ARISRYS RT LP++ IS++SA+QR GRCGRV+EGICIRLY E+ Sbjct: 398 TIPGIRYVVDTGLARISRYSPRTGTTSLPVDKISKSSADQRMGRCGRVAEGICIRLYDEE 457 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA- 474 D+ SRP+FT PEILR NLA VIL+M A L ++ FPFV+ PD R+I+DG +L ELGA Sbjct: 458 DYESRPQFTLPEILRANLAEVILRMVASRLPEVHNFPFVDPPDPRSIRDGFNVLRELGAL 517 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + + +Y LTP GR +++LPVDPR++ +++EA GC+ EA+II SAL I DPRERP Sbjct: 518 LDPRQGEKSYTLTPKGRTMARLPVDPRISAILIEAHPRGCLAEALIIASALCIIDPRERP 577 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 +K +D+ HR F SDFL ++NLW Y K S N ++ ++L+Y R+RE Sbjct: 578 AEKAVQADQAHRTFAHGSSDFLFYLNLWQAYFQHMDKVKSGNQMKKWSIANFLSYKRMRE 637 Query: 594 WQDIYTQLRQVVKELGIPVNS-----------EPAEYREIHIALLTGLLSHIGMKDADKQ 642 W+D++ QL ++ + G N+ E Y +H ++ + LS + K DK Sbjct: 638 WRDVHQQLTAILIDEGFIKNTLPMPKPFEPGMEDCRYEPLHQSIASAYLSQVASK-KDKN 696 Query: 643 EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 Y G + +FPGS LF +W++ A++V TSRL+ R+AA I PEW+E A L+ R Sbjct: 697 IYQGTKGREVMLFPGSFLFNHGGQWIVSAQMVHTSRLFARMAANILPEWLEEPAGPLLSR 756 Query: 703 TYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTR 762 TY EPH+E+ +G V+A E+V++ GL I+A R +Y I+P ELFI+ ALVE + Sbjct: 757 TYLEPHFEKNRGEVIAKEQVSLMGLIIIAGRPTSYGPINPQEATELFIQGALVECQTNEK 816 Query: 763 HAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSR 822 F N K+ E ++E + RRRD++VD+ + FY+QR+ V S + K Sbjct: 817 FGFLAHNQKVLNEARDMEERLRRRDLVVDELGISRFYEQRL-DTVYSIQSLKKIIKDKGG 875 Query: 823 ETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPL 882 ++ L + + ++ E YPN K +L Y+F+PG DGVT+ IP PL Sbjct: 876 DS--FLRMDVTDVMVRSPEAEDLSQYPNRLKVDGAKFKLQYRFDPGRPGDGVTIKIPQPL 933 Query: 883 LNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL-ELPLLD 941 ++ V EW +PGL E V A+IK LPKP+R VP + + ++ L + Sbjct: 934 VSSVPPEPLEWVVPGLLPEKVTAMIKGLPKPLRVKLVPVNKTVDRVMDKLDKYKHLSMGA 993 Query: 942 SLERELRRMTGVTVDREDWH-WDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKV 1000 +L + + + W +P HL V D K + ++ GR +++L ++ Sbjct: 994 ALSHAIHETMDIEIPAISWPGPSDLPPHLTARLAVTDSKGRVVRFGRDVRELAQSMGEVK 1053 Query: 1001 QETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 E++G+ W FG LP S K+G A+ L D V +K+ ++ + Sbjct: 1054 DLGHLEKLRKQWEKTGIKSWDFGDLPSSIPVKKG--APPAYVCLCPGDDCVDLKIVEDKV 1111 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 + + G+ L L IK++ + L K + +G ++ +++ Sbjct: 1112 KAQATHKKGVAALCTLECAKDIKHIKKYLALKGNAAKHAAYFGGTKQMEQVLFDTLLERT 1171 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVE---QILTAVFNINKRL-----KG 1172 ++ + TEE F E V+ + V K VE +I+ A + R+ + Sbjct: 1172 LEKE---LHTEEEF---REHVKTRIPALVAQGEKLVESTSRIMEAFHKTSFRISELEAQC 1225 Query: 1173 RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1232 R + L +++ M L+ F RL RYLQA+ R E+ +D +D+A Sbjct: 1226 RNNKFGLAFLKNLRTAMTQLLPPNFPNLYDDARLAHMPRYLQAVTIRAERGLLDLDKDKA 1285 Query: 1233 QMLKVENVQQAWQQWINKL--PPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKR 1290 + +V + ++ +L + + V++ WMIEE +VS FAQ+L TP PIS KR Sbjct: 1286 KAAQVREFEDHLRRLAKELGIKTTPEKRQAVEDFFWMIEEFKVSVFAQELKTPMPISPKR 1345 Query: 1291 ILQAMEQIS 1299 + + + +I Sbjct: 1346 LQKRLSEIE 1354 >UniRef50_Q0VPC9 ATP-dependent helicase HrpA n=2 Tax=Alcanivorax RepID=Q0VPC9_ALCBS Length = 1316 Score = 1374 bits (3557), Expect = 0.0, Method: Composition-based stats. Identities = 573/1331 (43%), Positives = 809/1331 (60%), Gaps = 62/1331 (4%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 T +L ++LD + DR R +RL G+ ++ ++A I + R A+ Sbjct: 4 TLKSLYEQLDKVRRADRFRLKKRLDGLARLPAKKRNDKAVDKVATAIASSVAGREQRLAS 63 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P + +PD LPV + +I +AI DHQVV++AGETGSGKTTQLPKIC+ELGRGI+G IGH Sbjct: 64 VPALEWPD-LPVVASRDEIKQAINDHQVVVIAGETGSGKTTQLPKICLELGRGIEGTIGH 122 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAAR VA+R+AEEL + G +G+KVRFS+ V +++++K++TDG+LL EIQQDR Sbjct: 123 TQPRRLAARAVASRVAEELHSPLGSTVGFKVRFSEQVGEHSLIKVLTDGMLLNEIQQDRF 182 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L QYDT+IIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID +RF+ HF AP++ Sbjct: 183 LNQYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDHQRFAEHFGGAPVL 242 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG-------DILIFMSGE 300 EVSGRT+PVE+RYRP E + + I D + E+ +E D+L+F++GE Sbjct: 243 EVSGRTFPVEMRYRPPAEGQE-----LSRQIEDVLLEIQREERSEGLPMARDVLVFLAGE 297 Query: 301 REIRDTADALNK-----LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 R+IRD L + +LR EILPLYARLS +EQ+R+F +H GRR+VL+TNVAETSL Sbjct: 298 RDIRDVHHHLKRCATHGSSLRDMEILPLYARLSQAEQHRIFSAHRGRRVVLSTNVAETSL 357 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI+YVID GTARISRYS +KVQRLP+EP+SQASANQR GR GRV GIC RLY ED Sbjct: 358 TVPGIRYVIDAGTARISRYSVHSKVQRLPVEPVSQASANQRAGRSGRVMPGICFRLYDED 417 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DFL+RP FTDPEI RTNL +VILQM+ L LG + FPF+E PD R ++DG RLL+ELGA+ Sbjct: 418 DFLNRPAFTDPEIQRTNLGAVILQMSDLRLGKVEDFPFIEPPDGRLVRDGYRLLDELGAL 477 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 T + LT LGRQL++ P+DP L RM++ A + +REA+I+ SAL+ QDPRERP Sbjct: 478 TEKQ-----TLTALGRQLARFPLDPTLGRMLVAAAEKNVLREALIVVSALATQDPRERPH 532 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 DKQQ +D+ H+ F +KESDFL FV LW + Q++ALS N + +L + +L+ R+REW+ Sbjct: 533 DKQQQADQAHQPFTEKESDFLFFVKLWQWADAQREALSRNQYEKLLKKTFLSPTRMREWR 592 Query: 596 DIYTQLRQVVKELGIPVN-----------------------SEPAEYREIHIALLTGLLS 632 D + QL + KE G +N S Y +H ALLTGLL+ Sbjct: 593 DTHRQLLLLAKEQGWTLNAPIDSGLSLTEPDNANNKSAAKASPSPLYAPLHKALLTGLLA 652 Query: 633 HIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 ++ M+ ++ E+ RN + ++PGS L + +W+M AE VETSRL+ R A+IDP WV Sbjct: 653 NV-MQRTEEGEWLSTRNRKPLVWPGSALSRTKARWLMAAEQVETSRLFARTVAKIDPLWV 711 Query: 693 EPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRH 752 E A HL+KR Y EPHW + +G MA E+V ++GL + + R VNY I P REL IR Sbjct: 712 EEAAGHLLKRHYFEPHWSKKRGCAMAKEQVNLFGLILASGRGVNYGPIQPVESRELMIRE 771 Query: 753 ALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARH 812 LV G F + N + +E++EHK RRRDILVD+E FYD R+ D+ + Sbjct: 772 GLVMGHLHREPPFVKANRERFETLEDMEHKLRRRDILVDEEARVAFYDARLPGDIHTVAG 831 Query: 813 FDSWW-KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADA 871 +W+ K+ + E + L + L+ + + +P+ L+L L Y F+P + Sbjct: 832 LMNWYNKRATAEQKEALFMDDGFLLSRSPD-LGNDQFPDQLKLDGLRLPLEYSFDPTGER 890 Query: 872 DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGR 931 DGVT+ +PL LNQ+ ES +W +PGL RE + ALI++LPK RR+FVP P+Y A + Sbjct: 891 DGVTLIVPLAALNQISESRLDWLVPGLLREKLEALIRALPKARRRHFVPVPDYVSALMET 950 Query: 932 VKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDD---KNKKLKEGRS 988 + P E PLL ++ REL+RM+G+ +++E+W + DHL++ +VVD K L +GR+ Sbjct: 951 LSPDE-PLLPAMTRELQRMSGLRIEQEEWQTANLADHLRMFIQVVDRVDGHRKVLAQGRN 1009 Query: 989 LQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDER 1048 L ++KD L V L + G W FG +PES EQ G V+ +PALVD Sbjct: 1010 LGEVKDRLVS-VTRDLPKPKQETPAVRG-QEWLFGDIPESQEQDLGGMTVRRFPALVDTG 1067 Query: 1049 DSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLEL 1108 + V ++ D+ + A G RLL + ++ L ++ A++ + + + Sbjct: 1068 NDVELQFLDDEADAAWAHRWGTARLLGFKLTVQLRDLRKQ---AAQMAGFQKLKTEKGVM 1124 Query: 1109 IDDCISCGVDKLIDAN---GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 + + +++ + PV +E F R + + ++ Sbjct: 1125 ARQALDHALLRVLAEHFQLHEPVRSEAAFRDRLNDHRGDFVPWAQQQLSIMGKLFAHYRQ 1184 Query: 1166 INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV 1225 + +L+ + A DIK Q+ L + ++ L + R L AI+ RLEKL Sbjct: 1185 LMGKLEKNFPLAWAHAHRDIKQQLACLFPDDVLLQMPWEWLQEYPRLLAAIDHRLEKLGG 1244 Query: 1226 DPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYP 1285 +DR ++E + + +P ++ + +++ WM++E RVS FAQQLGT Sbjct: 1245 QIGKDRTLSAELEAYSKQHETRAAGVPLWKQSEP-LQQYFWMLQEYRVSLFAQQLGTKLS 1303 Query: 1286 ISDKRILQAME 1296 +S KR+ + E Sbjct: 1304 VSAKRLNKQWE 1314 >UniRef50_B8KHJ8 ATP-dependent helicase HrpA n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHJ8_9GAMM Length = 1254 Score = 1371 bits (3548), Expect = 0.0, Method: Composition-based stats. Identities = 560/1236 (45%), Positives = 791/1236 (63%), Gaps = 18/1236 (1%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 A P ++YP +LPV++ +Q+I +A+R+HQVVIVAGETGSGKTTQLPKIC+ELGRG IG Sbjct: 14 AIPPLSYPSDLPVAEHRQEIADALREHQVVIVAGETGSGKTTQLPKICLELGRGRLQRIG 73 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRRLAARTVA RIAEE+ G +GY+VRF + + D T VKLMTDGILL+E+Q+DR Sbjct: 74 HTQPRRLAARTVAQRIAEEVGQPLGELVGYQVRFQEILGDRTAVKLMTDGILLSEMQRDR 133 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L QYDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+++TSATID RFS HFN AP+ Sbjct: 134 DLRQYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVLVTSATIDVGRFSEHFNGAPV 193 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDT 306 IEVSGR+YPV Y P + Q+ ++ V + GD+L+F+SGER+IRD Sbjct: 194 IEVSGRSYPVTTHYLPRDSSNSEDLLRQVASVVKEVQAGIHGTPGDMLVFLSGERDIRDV 253 Query: 307 ADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGR--RIVLATNVAETSLTVPGIKYVI 364 A L ++LPLYARLS EQ RVF S R R+VL+TNVAETS+TVPGI++VI Sbjct: 254 ARQLR--GAAGLDVLPLYARLSQGEQARVFGRGSARGLRVVLSTNVAETSVTVPGIRFVI 311 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 DPG ARISRYSYRT+VQRLPIEP+S+ASA+QR+GRCGRV GIC+RLY+E+D+L+RP+FT Sbjct: 312 DPGEARISRYSYRTRVQRLPIEPVSRASADQRRGRCGRVGPGICLRLYTEEDYLNRPQFT 371 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 DPEI R+NLA+V+LQM LGLGDI FPF+E PD R I+DG RLL+ELGA+ EQ Sbjct: 372 DPEIKRSNLAAVVLQMLQLGLGDITKFPFLEPPDSRLIRDGYRLLDELGAVNQREQ---- 427 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT LGR+++ P+DP L+RMVL AQ+ + E ++I SALSIQDPRERP D+Q +D+ Sbjct: 428 -LTRLGRRMAAFPIDPSLSRMVLAAQEFSVLPEMLVIASALSIQDPRERPADRQAQADQS 486 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H RF D SDF++ +NLW Y EQ++ LS N R+LC+ +YL++LR+REW+D++ Q+ Sbjct: 487 HARFADPRSDFMSLLNLWRYYEEQRQTLSENKLRKLCKREYLSWLRMREWRDVHRQISIA 546 Query: 605 VKELGIPVNSE---PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF 661 + G+ E +Y +H ALL+GLL +I +D +++EY RN R +FPGS ++ Sbjct: 547 CRSQGLKPALELAPETDYAGVHRALLSGLLGNIAQQD-ERREYLATRNRRLQLFPGSVVY 605 Query: 662 KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEK 721 +KPPKW++ E+VET R++ R AA I+P+W+ V L+K Y EP W+R QG V+A K Sbjct: 606 RKPPKWLVAGEIVETQRVYARTAASIEPQWLMQVNPALLKHQYYEPRWQREQGRVVAWRK 665 Query: 722 VTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEH 781 T++GL I V+Y++IDPALCREL IR AL+ G W AF + NL+L+ EVE+LE Sbjct: 666 TTLFGLTISDRVAVHYAKIDPALCRELLIREALIAGRWTKPPAFLKHNLRLQREVEDLES 725 Query: 782 KSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAE 841 ++RRRD+LVD++TLF+FYD+ + + +W K+ S L + L+ Sbjct: 726 RARRRDLLVDEDTLFQFYDELLPTHATNTTSLVAWIKEDSNRG-TALKLRRDQLLTRDPG 784 Query: 842 KISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRE 901 ++ +P+ + RLSYQF PG +ADGV++ +P+ LLN++ +W +PG+ RE Sbjct: 785 ALT-DAFPDRLEWEDQSYRLSYQFSPGKEADGVSITVPVALLNRLPRFRLQWLVPGVLRE 843 Query: 902 LVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWH 961 IAL+K LPKP+R+ VP P++ + L ++P ++PL ++L L++ G + DW Sbjct: 844 KCIALLKGLPKPLRKQLVPVPDWVDRALQYMQPTDVPLTEALGGALKQAGGPLIAASDW- 902 Query: 962 WDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWS 1021 + V D+ ++ RVVDDK K L + R + L + ++ L+ + ++GL +W Sbjct: 903 PEIVDDYYRMNLRVVDDKGKLLAQHRDVDALIKEFEEATRQQLTTEDGNSPARTGLLLWD 962 Query: 1022 FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSP 1081 F +L Y K+ + A+PALVD ++SV+I+LFD P E A GL RLL+L+ Sbjct: 963 FPRLEREYGFKQAGVDILAYPALVDAQNSVSIELFDYPGEALLAHRRGLARLLMLSSKPL 1022 Query: 1082 IKYLHEK-LPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 + ++ L + A L+ +L+D+ + + G ++ F + Sbjct: 1023 FRDFRKRFLKDNATALLFVALDVSRDDLLDELLPTLALNAGEVLDGDCRDKDQFETASRQ 1082 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 + D Q++ L A+ + + L+ D A +DI AQ L+ RG + G Sbjct: 1083 MSRTAVGLGNDYEAQLKNTLAAMADAVRILQRYTD-QYAQAKADITAQRSFLLSRGGLFG 1141 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 L RY +A+ R E+LA + +D+ + +++ + + P A + Sbjct: 1142 LASDELRHFPRYAKAMAVRAERLAANYRKDQEHQATLASLEAPMFELLAAQPGAAQLSPS 1201 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 + + M++ELRVS FAQ LGT P+S KR+ Sbjct: 1202 LHTFQIMLQELRVSLFAQHLGTSRPVSVKRLTAQWA 1237 >UniRef50_B0TXK9 HrpA-like helicase n=2 Tax=Francisella philomiragia RepID=B0TXK9_FRAP2 Length = 1266 Score = 1357 bits (3513), Expect = 0.0, Method: Composition-based stats. Identities = 521/1242 (41%), Positives = 775/1242 (62%), Gaps = 31/1242 (2%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 + P+ITYPD LPV++K DI + I D+QV++VAGETGSGK+TQLPKIC++LG G +G Sbjct: 49 SQKILPKITYPD-LPVAEKVDDIKKLIEDNQVIVVAGETGSGKSTQLPKICLDLGLGKRG 107 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRRLAAR++A+R+A E+ + + +K+RFSD S+NT++K+MTDG+LL+EI+ Sbjct: 108 LIGHTQPRRLAARSIASRVATEIGDQ--SKVSFKIRFSDQTSENTLIKVMTDGVLLSEIK 165 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D+ L QY+ IIIDEAHERSLNIDFLLG +K++LP RPDLK+IITSATID ++F +F N Sbjct: 166 NDKFLSQYEVIIIDEAHERSLNIDFLLGCIKKILPYRPDLKVIITSATIDHQKFIDYFQN 225 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREI 303 A I +SGRTYPVE+RY+ + D E + I A+DEL GD+L+F+ ER+I Sbjct: 226 AKDITISGRTYPVEIRYQ---NDEDFEEFSLQERILYALDEL---GRGDVLVFLPTERDI 279 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKY 362 +T LNK +LR TE+LPL++RLSN +QN++F RR++LATNVAETSLTVP IKY Sbjct: 280 HETLAYLNKQDLRFTEVLPLFSRLSNKDQNKIFNPEGSVRRVILATNVAETSLTVPRIKY 339 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 VID G ARISRYSYRTKVQRLPIE ISQASANQR GRCGR+S G+CIRLYSE+DF +R E Sbjct: 340 VIDSGLARISRYSYRTKVQRLPIEKISQASANQRAGRCGRLSAGVCIRLYSEEDFNNRKE 399 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 +TDPEILRTNLASVILQM L LG I FPF+++PD R ++DG +LL EL AI ++ S Sbjct: 400 YTDPEILRTNLASVILQMLFLKLGSIQDFPFIDSPDSRFVKDGFKLLFELQAI-SELNYS 458 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 K+T G +++ +P+DP+LA++V+E + +RE + I S LS+QDPRERP++ QQ +D Sbjct: 459 KPKITDDGMKMAIMPLDPKLAKIVIEGHRQNTLREIVSIVSFLSVQDPRERPLNFQQKAD 518 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 EKH DK SDF+A +NL N L K+LS+ + + ++++ +R EW DIY Q+ Sbjct: 519 EKHAIDKDKSSDFIAILNLANRLNSDLKSLSNREKKEYFKKNFISPVRFNEWNDIYRQIV 578 Query: 603 QVVKELGIPVNSEPA-EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF 661 +VV + ++S Y +H A+ +G LS++G + + EY GAR +F IFPGS F Sbjct: 579 EVVHQFKWKLSSNEKLNYENLHKAIASGFLSNVGF-NYENAEYLGARGLKFFIFPGSSQF 637 Query: 662 KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEK 721 K PKW++ +E+VET++ + R A+I+PEW+E +A+HLIK+ Y EP W + + AV+ E+ Sbjct: 638 KAKPKWLLSSEIVETTKTYARNVAKIEPEWLESLAEHLIKKHYDEPVWSKKRRAVVVNER 697 Query: 722 VTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEH 781 VT+YGL IV+ R V YS+I+P RE+FIR ALV GD+ ++ F+++NLKL +VEELE+ Sbjct: 698 VTLYGLEIVSKRSVQYSKINPQEAREIFIREALVNGDFDSKAYFYQQNLKLINQVEELEN 757 Query: 782 KSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAE 841 KSRR+DILVD+E +F YD I DV S FD W K V++E F+ L++ A+ Sbjct: 758 KSRRKDILVDEEVMFAHYDSFIPDDVCSGATFDKWLKSVTKEQQKGFIFDIESLMQHDAK 817 Query: 842 KISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRE 901 +I++ +P+ ++ L L Y F+P + DG TV +P+ +N + + EW + G + Sbjct: 818 EITQQKFPDVLTIADMHLPLEYHFDPLDERDGATVTVPIVFINDINPTVLEWGVYGFLYD 877 Query: 902 LVIALIKSLPKPVRRNFVPAPNYAEAFLGRV---KPLELPLLDSLERELRRMTGVTVDRE 958 ++AL+++LPK +R+N VP P YA+A + K PL + + + R+ G VD Sbjct: 878 KIVALLRALPKNIRKNCVPVPTYAQAIFESIDFDKDRHSPLKSIIAKHITRIVGFVVDET 937 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 W +++ HL + +VVD++ K L G+ + LK LK L A ++++ + Sbjct: 938 VWQDEELEKHLVLNVKVVDEQGKTLAVGKDIHILKQKLKN-----LVAKPKQEVDETVYY 992 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 W F + + + K VK + L + +D V + E K M L+RL+ L + Sbjct: 993 DWDFADIVMTSQIKEYCITVKVYNCLEEYKDGVKLSYKATFDEAKLCMQKSLKRLIKLRL 1052 Query: 1079 PSPI-KYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 + + K + + L + + D+ + +D N +T+ F Sbjct: 1053 QNQLSKNIKSNDLTSLSMSLKLS------DSKDNVVDKAMDLSFFDNIELPYTKADFEKF 1106 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLK-GRVDMTMALGLSDIKAQMGGLVYRG 1196 + + + + +I + K+L ++ + +D++ ++ L Sbjct: 1107 YAFGMQKFALNKTKVEALLLEITKFKSQLEKKLNVKKIPLNFIELFTDVRNELTELFTDD 1166 Query: 1197 FVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARR 1256 +++ + L YLQA+E RLEK ++ RDR ++V ++ + I + Sbjct: 1167 YISQ-PVEFLQRYKYYLQALENRLEKAKLNLQRDRGYQVEVNELRSKLAKKITANHIGKS 1225 Query: 1257 EDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 E ++ + +I+EL VS++ Q + T +S K+IL + +I Sbjct: 1226 ELIGIR-VSNLIQELWVSWYLQSVKTIESVSYKKILAYINEI 1266 >UniRef50_A5EVC9 ATP-dependent helicase HrpA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVC9_DICNV Length = 1302 Score = 1354 bits (3506), Expect = 0.0, Method: Composition-based stats. Identities = 547/1312 (41%), Positives = 781/1312 (59%), Gaps = 50/1312 (3%) Query: 10 TALQQRLDSLMLRDRLRFSRRLHGVKKV-KNPDAQQAIFQEMAKEIDQAAGKVLLREAAR 68 A++ ++++ +DR + +K+ + +A+ ++ + ++ + R+ Sbjct: 3 NAIRYDFNTVLCQDRHALKTLFYRLKRQTRQGFNTEALQAQLNERYQKSQERYRHRQENL 62 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P + ++LPV +K+ I E I HQVVI++GETGSGKTTQLP+IC+ELG G G I HT Sbjct: 63 PRPHFQNDLPVLAQKERIKELIAQHQVVIISGETGSGKTTQLPQICLELGLGAGGQIAHT 122 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AAR+VA RIAEEL G +GY+VRF + S +T++KLMTDG+LLAE D L Sbjct: 123 QPRRIAARSVAARIAEELSVPLGAAVGYQVRFDEQCSPDTVIKLMTDGLLLAETLTDPYL 182 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 QY+ IIIDEAHERSLNIDFLLGYL LL +R DLK+IITSATID E+F+RHF+ AP I Sbjct: 183 YQYEVIIIDEAHERSLNIDFLLGYLHRLLEKRRDLKLIITSATIDAEKFARHFHQAPQIN 242 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTAD 308 VSGRTYPVE+RYR + D + I A+DEL E GDIL+F+ ER+IR+TA Sbjct: 243 VSGRTYPVEIRYREPP-----ADSDLSEEILAAIDELDCEQRGDILVFLPTERDIRETAT 297 Query: 309 ALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGT 368 L++ L T+ILPL+ RLS ++Q VF+ + RRIVLATNVAETSLTVP IKYVID GT Sbjct: 298 FLSRAQLPATDILPLFGRLSLADQQAVFRPKNQRRIVLATNVAETSLTVPRIKYVIDTGT 357 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 AR+SRYS RTK QRLPIE ISQASANQR GRCGR+S G+CIRLYSE+DF +RPEFT+PEI Sbjct: 358 ARMSRYSLRTKTQRLPIEAISQASANQRAGRCGRLSAGVCIRLYSEEDFQNRPEFTEPEI 417 Query: 429 LRTNLASVILQMTALGL----GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 LRTNLA+VILQM L L DIA FPFV+ P+ R I DG RLL EL A+ Sbjct: 418 LRTNLAAVILQMLLLNLAQNGDDIARFPFVDPPEMRQINDGYRLLFELKAVDNHN----- 472 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 +LT LGR++++LP+DPR AR+V A++H C+ E +I+ +ALSIQDPRERP DK+Q +D + Sbjct: 473 RLTDLGRKIARLPIDPRFARIVFAAEEHACLHETLIVLAALSIQDPRERPFDKEQHADMR 532 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 HR F DK SDF +NL+ +Q++ LS+N R C++ +LN R++EW+ + QL + Sbjct: 533 HREFADKTSDFQTLLNLFAVYQKQRRQLSNNKLRAWCKSYFLNAARMQEWRALVNQLLRD 592 Query: 605 VKELGIPVNS-------------------EPAEYREIHIALLTGLLSHIGMKDADKQEYT 645 V + + +N E +H +LL G L +G+ D +EY Sbjct: 593 VHQQKLTINDYRPRPVISNETGEKGGLALENPNLMGLHRSLLAGFLDQVGLWDEQNKEYA 652 Query: 646 GARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 G R +FS+FP S L K P+ VM A ++E +R++ R+ A I+ +E +A HL K S Sbjct: 653 GPRQRKFSLFPASVLAKARPQAVMAAHIMELNRVYARMCAPIELHELEQLAAHLTKTQLS 712 Query: 706 EPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAF 765 PHW + G V+A E V +YGLPIVA RK + D E+FIR ALV G+ TR Sbjct: 713 APHWSKRAGNVLAEETVLLYGLPIVAGRKKPLATQDRDSAHEIFIREALVSGEINTRLTV 772 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 N LRA++E LE K+R R I+VD+E + +FY QR+ V S + W KK Sbjct: 773 IARNQALRAQLETLEDKTRSRGIVVDEEQVADFYLQRLPVTVYSTVTLEQWAKKYHEH-- 830 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 DLL E +L++E A +SK DYP + L Y F+P DG+TV +PL LN Sbjct: 831 DLLMTEADLLMQEVA--VSKRDYPENLAIRGYQFPLKYVFDPTQSDDGITVLLPLTALNA 888 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLER 945 V + FE +P + +E + +++ LPK RR VP P++A+A R+ E PL+ +L Sbjct: 889 VCAADFERLVPAMLQEKIEMILRRLPKMWRRQMVPIPDFAQALYERIVETETPLIPALIS 948 Query: 946 ELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLS 1005 + M G+ + + + +++ DH ++ FR++D K + + EGR L+ L+ + Sbjct: 949 GIDAMKGLKIPEDAFDQEKIDDHYRMNFRLLDAKKQVIAEGRDLEALQKQYAAEASLQFQ 1008 Query: 1006 AVADDGIEQSGL-HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQ 1064 + + + W + LP S E+ RG + +PAL E + ++L D+P ++ Sbjct: 1009 KRSHSQLASDEIVTDWLWENLP-SQEKMRGG--IIGYPALTLEDGQLYLRLHDDPERAER 1065 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 A G+R LL+ + S IKYLH+ LP K ++ L++ + L+DD IS V+++ Sbjct: 1066 AHRVGVRFLLMQKLSSQIKYLHKNLPYKTQMSLHYRKISSDIYLLDDIISALVEQVCLTA 1125 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 P T++ F+A + +L +A + +L IN+ L+ +D Sbjct: 1126 ALP-RTQKDFSAALLQGEKKLVAGGQQLAAVLVDLLAQYSRINEALRSTKP---VDAKND 1181 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 I+ Q+ LV+ F+ L D RYL A+E RL+KLA DP +D + + ++ Sbjct: 1182 IERQLARLVFPSFIRLTERAYLNDIARYLHAVELRLQKLARDPQKDAQRQKIIAPWEEKL 1241 Query: 1245 ----QQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 QQ P + ++ +++EE R+ FAQ+LGT +S+K++ Sbjct: 1242 SAKMQQCAVTYPLTANTPKTLQRFFYLLEEFRIQVFAQELGTKEKVSEKQLQ 1293 >UniRef50_B6BTD8 ATP-dependent helicase HrpA n=2 Tax=Betaproteobacteria RepID=B6BTD8_9PROT Length = 1223 Score = 1354 bits (3505), Expect = 0.0, Method: Composition-based stats. Identities = 489/1234 (39%), Positives = 767/1234 (62%), Gaps = 22/1234 (1%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++ + LP+ + + + I+++QV I+ GETGSGKTTQLPKIC+++GRG +IGHTQ Sbjct: 2 KLDFSSPLPILENIDQVAKIIKNNQVTIICGETGSGKTTQLPKICIKIGRGKNKIIGHTQ 61 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AAR+VA RIA+EL+T G +GYKVRF+D S +T +KLMTDG+LLAE Q D LL Sbjct: 62 PRRIAARSVATRIAQELETSIGNEVGYKVRFTDKTSSHTKIKLMTDGVLLAETQSDPLLK 121 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YDT+IIDEAHER+LNIDFL+G++K+LLP+RPDLKIIITSATID ++FS+HF+ AP +E+ Sbjct: 122 RYDTLIIDEAHERNLNIDFLIGFIKQLLPKRPDLKIIITSATIDADKFSKHFDGAPTLEI 181 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA 309 SGRT+PVE YRP+ ++ +++++ + E+ ++S GDIL+F+ GE++I D Sbjct: 182 SGRTFPVETLYRPMKNIEEEDVLSIEESVYEVIQEIGRKS-GDILVFLPGEKDIHDIRRY 240 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTA 369 LN++ E+LPL++RL +Q ++F + + +RI+LATN+AETSLTVP IK+VID G A Sbjct: 241 LNEMLNHDYEVLPLFSRLPVPDQQKIFTTSTKKRIILATNIAETSLTVPNIKFVIDSGLA 300 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 R+ RY+ R ++++L IE ISQA+ANQR GRCGR++ G+C RLY EDDF +R E+TDPEI+ Sbjct: 301 RVVRYNPRLRIEQLLIEKISQAAANQRTGRCGRIAPGVCYRLYDEDDFKNRSEYTDPEIM 360 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 R++LASVIL+M +L LGD+ FPF++AP K+ IQDG LL EL A+ + +T L Sbjct: 361 RSSLASVILRMASLNLGDVEVFPFIDAPFKKFIQDGYDLLFELHAVEKNR-----AITEL 415 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GR ++Q+P+DP +R+++EA C+ E + I +A+S+ DP ERP DK + +++ FH Sbjct: 416 GRTMAQIPIDPVFSRIIIEASNQHCLSEIIPIIAAISVADPIERPFDKLEEAEKAQMNFH 475 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 D S F++F LW L ++ ++ F C+ +L++ R+REWQ++Y QL Q+V+ELG Sbjct: 476 DPRSGFMSFYRLWLLLLDEVRSKKIKDFAVFCKKYFLSFTRMREWQEMYKQLMQIVEELG 535 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK-KPPKWV 668 N++ + Y +IH +LL GLL +IG K+ + Y G ++ RF I G LF+ K KW+ Sbjct: 536 YRFNNKESTYDQIHQSLLCGLLRNIGFKEVESNYYLGCKSLRFLI--GPKLFRNKKFKWI 593 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLP 728 M AE+++T + + + A I+ +W+E A+HL++ YS P + + V AT+K++++GL Sbjct: 594 MAAEIIDTGKFYAQCIAEINDQWIEKYAEHLLEAEYSNPRFNKKLNRVDATQKLSLFGLV 653 Query: 729 IVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 IV R ++Y I+P L + +FIR +VE + + F++EN KL E+E+LEHKSRRRDI Sbjct: 654 IVPDRTIHYGPINPELSKSIFIRQGIVENQYISPGLFWKENQKLIREIEDLEHKSRRRDI 713 Query: 789 LVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDY 848 L++D+ LFEFYD++I+ +VI+A F+ W K V + P+ L K L++ A+ I++ Y Sbjct: 714 LINDDVLFEFYDEKINENVINAAGFEHWRKGVEKNQPEHLYLTKEYLMQHSAKDITETVY 773 Query: 849 PNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIK 908 PN K +L Y FEP DG+T+ IPLP LN ++ S +W +PGL +E + K Sbjct: 774 PNHITINQQKYQLKYHFEPNHPRDGLTIAIPLPNLNLIDSSELDWLVPGLLKEKITWSFK 833 Query: 909 SLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDH 968 +LPK +RR +P ++ E FL P + ++ R + + D ++ +P H Sbjct: 834 NLPKDIRRKCIPVKDWLEKFLEY--PRQGSFKETFTRFIWKYVDPHFLMSDDYFAYIPSH 891 Query: 969 LKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPES 1028 LKI + V++D+ K + L LK K V+ + + + IEQ G+ W +LP Sbjct: 892 LKIKYEVINDQGKMIDLNEDLDLLKKENKKNVEAVVERIQFN-IEQDGITSWPIEELPIK 950 Query: 1029 YEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK 1088 EQ K +A+PALVD ++S++I++FDNP +Q GLRRL+ + K + + Sbjct: 951 VEQTINGKKFEAYPALVDYQNSISIEVFDNPKRAEQHHVQGLRRLIYFHFKERFKRIQKM 1010 Query: 1089 LPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDT 1148 P+ ++ + + +L+++ VD++I + + + + L R L Sbjct: 1011 PPDLSEAAIALSTQIPPKDLMENLCDVIVDEMI-GHKTNIRKQIDYEQLINDGRNNLPRM 1069 Query: 1149 VVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGD 1208 + + + +I + I K + + + + Q+ L+ + +L Sbjct: 1070 IDHMTMHLNKIASFYKEIQKLRQSQSYIEEIEDDI--EEQLEALLPPYEKPLFQYDKLQF 1127 Query: 1209 TLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKE----I 1264 +YL+A++ R+EK P R + + +W+ K+ + ++ E Sbjct: 1128 IPKYLEALKLRIEKY---PQRIDHDQECISQYNRIKNKWVEKVLGFVENELEIPEIYIDF 1184 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +W ++ELRVS+FAQ+L T PIS KR+ + QI Sbjct: 1185 QWKLQELRVSFFAQELKTNSPISVKRMDKEWTQI 1218 >UniRef50_C7RBD8 ATP-dependent helicase HrpA n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBD8_KANKD Length = 1311 Score = 1353 bits (3502), Expect = 0.0, Method: Composition-based stats. Identities = 564/1303 (43%), Positives = 804/1303 (61%), Gaps = 37/1303 (2%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARP- 69 + +++ L D+ ++ + K+ K+ + + + + + V R+ P Sbjct: 27 ITEQVTQCQLVDQFELNKLKSIITKRQKSNQPVSKLISKAEQILQDSKKIVEQRKKLIPG 86 Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 +I + LPV Q + D+ +AI ++QVV++AGETGSGKTTQLPKIC++LG G+ G IGHTQ Sbjct: 87 DIEFDMALPVCQARDDVRKAIEENQVVVIAGETGSGKTTQLPKICLQLGLGVYGKIGHTQ 146 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AA +VA RIAEELK+E G +GY +RF+D S T V++MTDGILL EI D LL Sbjct: 147 PRRVAATSVARRIAEELKSELGELVGYSIRFNDQSSAVTPVRVMTDGILLNEITHDPLLR 206 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----NNAP 245 QYDTIIIDEAHERSLNIDFLLGY++ +LP+RPDLK+IITSATID ERFS+HF AP Sbjct: 207 QYDTIIIDEAHERSLNIDFLLGYIRNILPKRPDLKVIITSATIDVERFSKHFAIDGKPAP 266 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRD 305 I+E+SGRTYPV+V YRP EE Q++ I A+DEL + GDILIF+SGE EIR+ Sbjct: 267 ILEISGRTYPVDVWYRPDDEENPSP---QVERIGHALDELMSFAPGDILIFLSGEAEIRE 323 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVI 364 TA L K E+LPLYARLS EQ ++F G RRI+L+TNVAETS+TVPGI++VI Sbjct: 324 TAKFLRKERFEGCEVLPLYARLSMREQEKIFHPSGGKRRIILSTNVAETSVTVPGIRFVI 383 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 DPG ARISRYS R K+QRLPIE ISQASANQRKGRCGRV++G+CIRLY E+DFL+RPEFT Sbjct: 384 DPGFARISRYSVRNKIQRLPIEKISQASANQRKGRCGRVADGVCIRLYEEEDFLNRPEFT 443 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 D EILRTNLA+VILQM LGLGDI AFPF++ P + I DG+ LL EL A+ +Q Sbjct: 444 DAEILRTNLAAVILQMKQLGLGDIEAFPFIDEPAAKQISDGLNLLSELQAVDGKKQ---- 499 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT +GR++++LP++PRLAR++L A+ C+REA+I+ + LS++DPRE P +K++ + +K Sbjct: 500 -LTNIGRKMARLPIEPRLARILLAAEDESCIREALILAAFLSVKDPREWPFEKRELAQQK 558 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H ++ +SDF+A +NLW++L +QQ+ LS+NAFRR C+ + +N+ REW+ + QL+ + Sbjct: 559 HAKYKHPQSDFIAIINLWDHLHKQQEDLSNNAFRRYCQEELVNFNAYREWRSTFRQLKSL 618 Query: 605 VKELGI-------PVNSEPA-EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 VK P+N + Y ++H LLTGLLS IG KD +K Y G R RF I P Sbjct: 619 VKSAHHQTQKQSEPINPDDKVYYAKLHSILLTGLLSFIGQKDIEKG-YLGTRQTRFMIHP 677 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 S FKK P WVM E+VET++ + R+ A I+ W+E + +HLIK Y + HWE+ +GAV Sbjct: 678 QSANFKKQPPWVMAFEIVETTQNYARLTAMIETPWIETIGKHLIKSHYFDAHWEKKRGAV 737 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 +A+ + T+ GL IV+ R V+YS I+P LCRELFI H LV + + RH+F ++N +L +V Sbjct: 738 VASLQQTLLGLKIVSNRTVDYSSIEPELCRELFILHGLVRRELEPRHSFQQDNEQLWLDV 797 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI 836 E+ K+R+ D+ D+ L ++D+R+ + + + + W KK +++ LL K +L Sbjct: 798 EQEIAKARQADMRTDERDLIAWFDKRLPESICNVKQLNQWLKKNAKQNNQLLTLNKDVLF 857 Query: 837 KEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIP 896 K AE+ YP +++L LSY FEPG DGVTV IP L Q ++S FE +P Sbjct: 858 K--AEEQDASLYPETIQVKSIELPLSYHFEPGHPQDGVTVKIPQSLSQQFKDSDFERLVP 915 Query: 897 GLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVD 956 GL E + +++SLPK R+NFVP P +++A +V + L+D + + L +MTGV + Sbjct: 916 GLLEEKIEFMLRSLPKRFRKNFVPIPQFSQACYEQVLEQQGSLIDIISKHLFKMTGVILP 975 Query: 957 REDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSG 1016 +E W +P+H + F +V DK K L GR+L+ ++ Q + + + ++ Sbjct: 976 KEAWQELSLPEHYLMRFEIVGDKGKILTSGRTLEQSQE----LKQVKVKSKSSHKKKEET 1031 Query: 1017 LHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLL 1076 W + E + K+ AL D D V I N + + G+ RLL L Sbjct: 1032 FTHWPASFIKEGM-FEEAGTKIPVTYALEDGGDKVRILAVVNKRQAENVHVRGVCRLLAL 1090 Query: 1077 NIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAA 1136 + YL +K NK KL L + V E+IDD + L+ N + + FA Sbjct: 1091 EKSQLLSYLKKKYHNKQKLTLSVSTLASVDEIIDDAAMASLKDLVQTN--IPYDKTSFAE 1148 Query: 1137 LHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRG 1196 L +K+ EL ++ + Q+L I + KG + T+A DI Q L G Sbjct: 1149 LSKKMEKELVPATTELLDDLVQVLQLRSRILAQAKG-LGKTLASTRKDIGNQCDYLFQPG 1207 Query: 1197 FVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARR 1256 F G ++ D RYL AIEKR+E+ ++P ++ ++ + + + Sbjct: 1208 FCFRFGADKIKDFKRYLSAIEKRIERAKLNPLKEAESLIVISDWVDVRESLAQ---DQAI 1264 Query: 1257 EDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 +V E WM+EE R+S FAQ T +PIS KR+ + ++ + Sbjct: 1265 PTFEVDEFNWMLEEFRISLFAQGQKTRFPISAKRLQKFVDDLE 1307 >UniRef50_B7GWG2 ATP-dependent helicase HrpA n=17 Tax=Acinetobacter RepID=B7GWG2_ACIB3 Length = 1294 Score = 1352 bits (3499), Expect = 0.0, Method: Composition-based stats. Identities = 539/1315 (40%), Positives = 783/1315 (59%), Gaps = 76/1315 (5%) Query: 19 LMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLP 78 +M RDR R +R ++A E+ K +Q+ KV R P+I +LP Sbjct: 20 VMARDRYRLNRLR---------KDKKANTAEIEKLFEQSNAKVRQRFERLPKIKLNQDLP 70 Query: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138 V+Q ++EAI+ HQV+IVAGETGSGKTTQLP+I M GRG+ G+IGHTQPRRLAAR+V Sbjct: 71 VTQYTDRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARSV 130 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 + RIAEE+ + G IG+K+RF++ S +++V+LMTDGILLAE+ DR L +YDTIIIDE Sbjct: 131 SQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIIDE 190 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258 AHERSLNIDF++GYLK+LLP+RPDLK+I+TSAT+D RFS +FNNAPI EV GR+YPVEV Sbjct: 191 AHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVEV 250 Query: 259 RYRPIVE---------EADDTERDQLQAIFDAVDELSQE-------SHGDILIFMSGERE 302 RYRPI E E DD E + +A+ AV+E + H DILIF S E+E Sbjct: 251 RYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQE 310 Query: 303 IRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS-GRRIVLATNVAETSLTVPGIK 361 IR+ + L K RHTEILPLYARL+ SEQ ++F GRRI++ATNVAET+LTVP I+ Sbjct: 311 IRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNIR 370 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVID G ARISRY+YR++VQRLPIE ISQA+ANQRKGRCGRV+ G+CIRLYSE+DFLSRP Sbjct: 371 YVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSRP 430 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 EFT+PEI RTNLASVILQM +LGLG++ F F+E PD R + DG +LL ELGA+ + Sbjct: 431 EFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN- 489 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 +LT +G+ ++++P+DPRLARM++ G ++E +++ SAL++QDPRERP DKQ + Sbjct: 490 ---ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQA 546 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKA-LSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 D+KH F + +SDFL ++ LW+ L + +A +S N R+ + +L++LR+REW+ + Q Sbjct: 547 DQKHALFKEADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQ 606 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L ++ + L + N +PA Y +H ALLTGLLS I K ++ + R + +FP S L Sbjct: 607 LVELAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTL 666 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 K WVM E+VETS+++ R A+IDPEW+ A+ L+K Y EPHW + G V A Sbjct: 667 HKTNTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYA 726 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +++++GL I R VN+ ++D E+F+R AL G+ T F + NL EVE +E Sbjct: 727 QISLFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVE 786 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 K RRRD++VD+ET+++FY +I ++ S R F+ W V + P L E L Sbjct: 787 DKLRRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLN-- 844 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 ++ + +P+ H G L+L +Y+F+P D DG TV IP+ L QV+E+ + W IPG R Sbjct: 845 DRPTTQQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRL 904 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP--LELPLLDSLERELRRMTGVTVDRE 958 +L+ AL+K+LPK RRN VP P+ A + + L + L LR G + + Sbjct: 905 DLIEALLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALR---GEQITEK 961 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 D+ ++++ +L +V+D+K K + +GR L +LK + + + + Sbjct: 962 DFSFERIDPYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKGE-------- 1013 Query: 1019 IWSFGQLPESYEQ----KRGNYKVKAWPALVDERD----------SVAIKLFDNPLEQKQ 1064 F PE++ K VK + ALV ++ V I+ F++ E + Sbjct: 1014 ---FKTFPENFTFEASQKVTGVVVKQYQALVPTKNFAELEAKDESGVVIQTFNDQAEAIK 1070 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 G+ RL+ + + ++ L +++ L L ++P G +L + + I Sbjct: 1071 QHREGIIRLVHMQLGDLVRQLKKQIS--KPLALAYSPLGDKAKLEQMLVYATLQMAITT- 1127 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 F L E+V+ + +Q+ I I ++L + D Sbjct: 1128 --LPINAGEFNQLLEQVKKQFLSYGQQALEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDD 1185 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 I+ Q+ + FV + RYL+A+ RL++L + RD A + V+ Sbjct: 1186 IEDQLDLMSLGNFVYCQPVDLWQEYPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKV 1245 Query: 1245 QQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 ++ N D +KE+ M+EELR+S F+Q + T PIS R+ + +++ Sbjct: 1246 FKFKN--------DPRIKELYLMLEELRISLFSQPMKTKMPISPTRLQKLWDRLG 1292 >UniRef50_C0QAN7 HrpA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAN7_DESAH Length = 1333 Score = 1345 bits (3481), Expect = 0.0, Method: Composition-based stats. Identities = 520/1336 (38%), Positives = 758/1336 (56%), Gaps = 52/1336 (3%) Query: 9 FTALQQRLDSLMLRDRLRFSR---RLHGVKKVKNPDAQ--QAIFQEMAKEIDQAAGKVLL 63 +++ L M DR + RL + K PD Q+ + +D++ + Sbjct: 4 VKKIERLLPETMCADRYCLVQDVQRLKRLIKQNTPDRAGLQSRIAALEGRVDKSRQEREQ 63 Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R+A+ P+I Y LP++ KK +I+ A++ H+VVI++GETGSGKTTQ+PK CM GRG G Sbjct: 64 RQASMPDIAYLPELPITGKKDEIIHALKFHRVVIISGETGSGKTTQIPKFCMAAGRGAAG 123 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 IG TQPRR+AA TVA RIAEEL PGG +G+K+RF D S ++++K+MTDGILLAE Q Sbjct: 124 KIGCTQPRRIAAITVAARIAEELGQLPGGVVGHKIRFDDRSSKDSIIKIMTDGILLAETQ 183 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L +YDTII+DEAHERSLNIDF LG L+ L+ +RPDL +++TSATID E+FS+ F+N Sbjct: 184 HDPFLNEYDTIIVDEAHERSLNIDFTLGILRNLVRKRPDLTLVVTSATIDTEKFSKAFDN 243 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERD--QLQAIFDAVDELSQESH-GDILIFMSGE 300 AP+IEVSGR +PVE+RY PI + +D D ++A AVDE+ ++S GDIL+FM E Sbjct: 244 APVIEVSGRMFPVELRYAPIDDPDNDDLDDQGYVEAAAGAVDEIQRQSRTGDILVFMPTE 303 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 R+I +T + + T +LPL+ARLS +Q RVF GR+I+++TNVAETSLT+PGI Sbjct: 304 RDIEETIELIQGRKYPGTLVLPLFARLSARDQARVFSRGVGRKIIVSTNVAETSLTIPGI 363 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 KYV+D G ARI YS RT+ LP+ PIS++SANQR GRCGRV+ GICIRL+SED F SR Sbjct: 364 KYVVDSGLARILHYSPRTRTTALPVSPISRSSANQRMGRCGRVANGICIRLFSEDAFESR 423 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT--- 477 P FT PEILR+NLA VIL+M +L LG++AAFPF++ P ++I+DG L ELGAI Sbjct: 424 PLFTSPEILRSNLAEVILRMISLKLGNVAAFPFIDPPAPKSIKDGFDTLVELGAIQQRRG 483 Query: 478 -DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + Q Y LT GR ++++PVDP+L+R++LEA +GC+ EA++I SALSI DPR+RP D Sbjct: 484 KNNQRGGYALTTRGRVMAKIPVDPKLSRILLEADHNGCLDEAVVIVSALSIADPRQRPKD 543 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS-SNAFRRLCRTDYLNYLRVREWQ 595 K Q +D+ H F D SDF+ +N+W + +L N RR C+ ++L++ R REW Sbjct: 544 KVQHADQMHAAFKDPSSDFVTLLNIWKAYVAAEHSLKTRNQVRRFCKDNFLSFRRFREWG 603 Query: 596 DIYTQLRQVVKELGIPVNSEPAE--------------------YREIHIALLTGLLSHIG 635 DI Q+R V+KE GI ++ + Y +H ++L G L++I Sbjct: 604 DIQHQIRSVLKEHGITRSNTDSTVTKVGTKGLKAKAFEIGGPFYTALHKSILAGYLANIA 663 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 K +K YT + +IFPGSGL+ W++ AE VET++L+ R A IDP+W+E Sbjct: 664 QK-KEKNNYTATKGRAATIFPGSGLYNSGGSWIVAAEFVETTKLFARGVAIIDPQWLEET 722 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 Q L+ RT+S P WE+ +G V+ATE+++++GL IV R V Y +I+P E+FIR ALV Sbjct: 723 GQELLTRTWSTPRWEKQRGEVVATEQISLFGLVIVPERTVAYGKINPREAGEIFIRQALV 782 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 E + F N L E+ ++E K+RRRDI+V ++ +F FY QR+ D + F Sbjct: 783 EQEVARPLGFMVHNQALIDELRQVEEKTRRRDIVVTEDDMFLFYQQRLDQDFSNLATFTR 842 Query: 816 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 875 + K+ + L L + ++ L +P+ G RL Y F+PGA+ DGVT Sbjct: 843 FLKEQGSD--LFLRMTLEDLQQRSPDRDELLKFPDSLEMGGGSFRLEYGFQPGAETDGVT 900 Query: 876 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL 935 V +P V S + +PGL E + ALIK+LPK R VP + A + Sbjct: 901 VKVPATSAASVSVSTIDRLVPGLLTEKIAALIKALPKRFRVRLVPVADTAAMIADSLPES 960 Query: 936 ELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDA 995 + PL L +++ V + W + +HLKI + D K K++ R L Sbjct: 961 DRPLFVELSHFIKQRFKVDIPPSAWSDATLEEHLKIRISITDAKGKEVAASRENDLLDKY 1020 Query: 996 LKGK-VQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGN-YKVKAWPALVDERDSVAI 1053 KG + L A +E++G+ W FG + +G + L E V + Sbjct: 1021 AKGHGSNDLLFEDAKRRLERTGVTSWDFGDISSPVLLGQGQELSYNVYYGLQSEEQGVGL 1080 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCI 1113 +LF + E +++ G+ +L + + K L + + L + +G + + Sbjct: 1081 RLFKSHAEARRSHVAGVEKLSTICFEADFKALKKDVKKWTLLRPRTSKFGGWERFQNALV 1140 Query: 1114 SCGVDKLIDANGGPVWTEEGFAALHE-------KVRAELNDTVVDIAKQVEQILTAVFNI 1166 SC +L + V T + F L + + EL T+V + + ++ LT + N+ Sbjct: 1141 SCVFRELFSRD---VRTPKAFLELADKHLPLVYRHGEELMKTMVTLFDEHDRTLTLLKNL 1197 Query: 1167 NKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVD 1226 LK T+ ++ + L+ F + F R+ RY+ AI R E+ AV+ Sbjct: 1198 F--LKSGNRPTVLAMAQTLEKDLAALLPELFPSLYDFTRIKKLERYVAAIRIRAERGAVE 1255 Query: 1227 PHRDRAQMLKVENVQQAWQQWINKL--PPARREDEDVKEIRWMIEELRVSYFAQQLGTPY 1284 P +D + V + L +R + E V+ WMIEE +VS FAQ+LGT Sbjct: 1256 PVKDSVKAGLVAEHTLKLNNLVATLSKESSREKVEAVEAFYWMIEEYKVSVFAQELGTLV 1315 Query: 1285 PISDKRILQAMEQISG 1300 IS KR+ +I Sbjct: 1316 KISPKRLNTMWREIQA 1331 >UniRef50_Q2LSZ0 ATP-dependent helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ0_SYNAS Length = 1282 Score = 1340 bits (3468), Expect = 0.0, Method: Composition-based stats. Identities = 514/1271 (40%), Positives = 759/1271 (59%), Gaps = 35/1271 (2%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 ++ K LR RP +TYP +LP++ ++++I++AI H+VV++ GETGSGKTTQLPK+C+ Sbjct: 15 RSGNKKELRRKNRPRVTYPADLPITARRREIVQAIARHRVVVITGETGSGKTTQLPKMCL 74 Query: 116 ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 E GRGI G+IG TQPRR+AA TVA RIAEEL G +GY++RF D + +++MTD Sbjct: 75 EAGRGINGIIGCTQPRRVAAVTVAERIAEELGQTVGQAVGYRIRFEDRSGPSPYIRIMTD 134 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 GILL E Q D LL YDTII+DEAHER+LNIDFLLGYLK LL +R DLKIIITSATID E Sbjct: 135 GILLMETQSDPLLHAYDTIIVDEAHERNLNIDFLLGYLKTLLRKRNDLKIIITSATIDTE 194 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL--SQESHGDI 293 +F+ F+ AP+IEV+GR YPVEV YRPI + D E ++A AV+EL + GDI Sbjct: 195 KFAAAFDGAPVIEVTGRVYPVEVLYRPIEQGDGDEEITHVEAAVRAVEELRARRSDRGDI 254 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 LIFM E++IRDT + L + ILPL+ARLS +EQ R+F + + ++I++ATN+AET Sbjct: 255 LIFMPTEQDIRDTCELLEGRRYENLVILPLFARLSWAEQRRIFSATTAQKIIVATNIAET 314 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLT+PGI+YVID G AR+S+Y+ RT+ LP+ IS++SA+QRKGRCGRV G+CIRLY Sbjct: 315 SLTIPGIRYVIDTGYARVSQYNPRTRTNSLPVRAISRSSADQRKGRCGRVQNGVCIRLYE 374 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E+D+L+RP+F+ PEILR+NLA VIL+M L LG AAFPF++AP+ ++++DG +L+ELG Sbjct: 375 EEDYLNRPQFSVPEILRSNLAEVILRMLKLRLGHPAAFPFIDAPNPKSVRDGFEILKELG 434 Query: 474 AITTDEQASAY---------KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 AI+ ++ ++ +LT GR++++LP+DPR+AR++LEA+K GCV EA II S Sbjct: 435 AISIEKNRNSREEGNGEADVRLTERGRRMARLPMDPRIARILLEAEKEGCVEEATIIASG 494 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL-SSNAFRRLCRT 583 L IQDPRERP+D++ +D HR F D SDFL + +W+ Q+ L S R+ CR Sbjct: 495 LCIQDPRERPVDEEGLADAAHRVFLDPTSDFLTLLRIWDKYQRAQETLKSQGKMRKYCRV 554 Query: 584 DYLNYLRVREWQDIYTQLRQVVKE-------LGIPVNSEPAEYR-EIHIALLTGLLSHIG 635 +YL++ R+REW+DIY Q+R + +E + + + P + IH ++L+G LS I Sbjct: 555 NYLSWRRMREWKDIYEQIRTIRREEEKADRSISKKLAAAPEDLNAAIHRSILSGYLSGIA 614 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 +K +K Y+ R +FPGSGLF W++ AE+VETSRL+ RIAA I EW+E + Sbjct: 615 VK-KEKNIYSATRGREVMLFPGSGLFNSGGNWIVAAEMVETSRLFARIAANISSEWIEEL 673 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 A +L TYSEPHWE+ + V+A ++V+++GL IV RKV+Y+ IDP +F+R ALV Sbjct: 674 AGNLCTSTYSEPHWEKRREEVVAYQQVSLFGLVIVPQRKVSYAHIDPEEASRIFVRSALV 733 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 EG+ +T F N +L AEV +E K RRRD+L D+ L +FY R+ + + R Sbjct: 734 EGELKTPLPFLLYNRQLVAEVIGMEDKIRRRDLLQDESVLNDFYASRLP-GICNVRTLKR 792 Query: 816 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 875 K + L + ++ ++ +P+ G R Y+F+PG DGVT Sbjct: 793 --KIREQGGDAFLRMTPADVLTRLPDEEELSLFPDEVTVGGRSYRCVYRFDPGKADDGVT 850 Query: 876 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL 935 + IP LL V + +W IPG R+ ++AL++ LPK R+ P A+ + + Sbjct: 851 LKIPDVLLPDVPAAAADWMIPGHLRDRILALLRGLPKEYRKKLQPLAGTADYIVKHLGGP 910 Query: 936 ELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDA 995 PLL ++ LR GV + W +VPD L++ F VVD + ++ GR L L+ Sbjct: 911 SGPLLSAVAGLLRERLGVDIPASAWSAREVPDFLQVRFAVVDGEGREKAAGRDLSLLQQT 970 Query: 996 LKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQ-KRGNYKVKAWPALVDERDSVAIK 1054 L + A E+S L W FG++PES + G++K AWPAL V ++ Sbjct: 971 LTAEQDSRAFEQARRKWEKSDLTAWDFGEIPESIDLHANGSFKGCAWPALTPGDGCVHLR 1030 Query: 1055 LFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIS 1114 L+ E G+ L L +K L + L L + + V + + Sbjct: 1031 LYKTREEAACVHREGIAALYGLYFTRELKELKKALKLTEPLKTWAESFIGVRNMESRLLE 1090 Query: 1115 CGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNI-----NKR 1169 L + V T E F A K+ ++ + + + VE +L A F I N Sbjct: 1091 KVKKDLFAVD---VRTAEDFEAHARKIAGKILISGQEGIRTVEPLLKAWFEIAGDFRNLE 1147 Query: 1170 LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHR 1229 + R + + ++ +M GL+ F+ RL RYL+A++ R E+ ++P + Sbjct: 1148 IVNRGNSGAREFILQLRREMEGLLPADFLCRFDAGRLSHIPRYLKALKIRAERGLLNPEK 1207 Query: 1230 DRAQMLKVENVQQAWQQWINKLPPARRED--EDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 DR + ++ + + + ++ + + ++ MIEE +VS FAQ+L T +P+S Sbjct: 1208 DRRRERELLPFVTRHNELVQNMTSGVSDEKQQALADLSLMIEEFKVSLFAQELKTAFPVS 1267 Query: 1288 DKRILQAMEQI 1298 +R+ + + +I Sbjct: 1268 ARRLEEKLNEI 1278 >UniRef50_C7QZ06 ATP-dependent helicase HrpA n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZ06_JONDD Length = 1435 Score = 1339 bits (3466), Expect = 0.0, Method: Composition-based stats. Identities = 595/1383 (43%), Positives = 815/1383 (58%), Gaps = 158/1383 (11%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ITYP++LPVS +++ I +A+R+HQV+IVAGETGSGKTTQ+PKI +ELGRG G IGHTQ Sbjct: 50 TITYPESLPVSAQRERIAQALREHQVIIVAGETGSGKTTQIPKIALELGRGRAGQIGHTQ 109 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AAR+VA RIA+EL T+ G +GY+VRF+D S++T+VK+MTDGILLA+IQ+D L+ Sbjct: 110 PRRIAARSVAERIADELGTQIGKIVGYQVRFTDESSEDTLVKVMTDGILLAQIQRDPQLL 169 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-------- 241 YDT+IIDEAHERSLNIDFLLGYL LLP+RPDLK+IITSATID RF+ HF Sbjct: 170 AYDTLIIDEAHERSLNIDFLLGYLTNLLPQRPDLKVIITSATIDSARFAEHFASPGPNGE 229 Query: 242 -----------NNAPIIEVSGRTYPVEVRYRPIVEEA----------DDTERDQLQAIFD 280 AP+IEVSGRTYPVE+RYRP+ EA + + D + ++ Sbjct: 230 RGPDAVASGLATPAPVIEVSGRTYPVEIRYRPLDGEALGVADGQGNRSNDDPDLMTSLCA 289 Query: 281 AVDELSQESHGDILIFMSGEREIRDTADALNK---------LNLRHTEILPLYARLSNSE 331 A DEL E GDIL+F+SGER+I D DAL + +TEI+PL+ARLS +E Sbjct: 290 ATDELMLEGPGDILVFLSGERDIHDAHDALTAHLGARATDPRDPGYTEIVPLFARLSAAE 349 Query: 332 QNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 Q+R+FQSHS RRIVLATN+AETSLTVPGI+YVIDPGTARISRYS TKVQRLPIEPISQA Sbjct: 350 QHRIFQSHSHRRIVLATNIAETSLTVPGIRYVIDPGTARISRYSKTTKVQRLPIEPISQA 409 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GD 447 SANQR GRCGRV+EGI IRLYS++DF +RPEFT+PEILRT+LASVIL M ++G+ D Sbjct: 410 SANQRSGRCGRVAEGIAIRLYSQEDFQARPEFTEPEILRTSLASVILHMVSVGVVRTPDD 469 Query: 448 IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVL 507 IA+FPFV+ PD + ++DGV LL+EL A+++ ++ + LTP+GRQL+ LP+DPRLARM++ Sbjct: 470 IASFPFVDPPDTKAVRDGVALLQELSALSSGKRGTT--LTPVGRQLAALPIDPRLARMIV 527 Query: 508 EAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGE 567 EA + G E +II +ALSIQDPRERP + + +D HRRF + SDFL ++N+W Y+ Sbjct: 528 EANRRGVAGEVLIIAAALSIQDPRERPAEVRDEADTCHRRFVEGRSDFLTYLNMWEYVRS 587 Query: 568 QQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA---------- 617 QQKALSS+AFRR+CR +YLN+LR+REWQD+ +QLR + + LGI V A Sbjct: 588 QQKALSSSAFRRMCRREYLNFLRIREWQDVVSQLRDMARPLGITVTHRSAQPVGDALTTS 647 Query: 618 -----------EYREIHIALLTGLLSHIGMKDAD---------------------KQEYT 645 + IH ++L GLLS IGM+++ + EY Sbjct: 648 EDTSVDTRFVWDGEAIHRSILAGLLSQIGMQESTDVSATRKGKDAAQDRRAARMARNEYL 707 Query: 646 GARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 G+R +F+IFPGS L +KPP WVM A+LVETSRLW R A I+PEW E +AQ ++KRTYS Sbjct: 708 GSRGTKFAIFPGSSLSRKPPTWVMAAQLVETSRLWARDVAAIEPEWAEELAQGIVKRTYS 767 Query: 706 EPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAF 765 +P W +GA M EKV +YG+PIV R + YS +D R++FIRHALV+G W T HAF Sbjct: 768 DPAWSTKRGAAMVREKVMLYGVPIVTERPILYSHVDRDAARDMFIRHALVDGQWTTHHAF 827 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 +R N + AEVEE ++R + VDD L+EFYD R+ V+SA HFD WWK + P Sbjct: 828 WRHNKAVIAEVEEFYARTRATQLEVDDTVLYEFYDARLPDSVVSAAHFDRWWKDTRKTEP 887 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 LL+ + L+ ++ YP W QG+L ++Y + PG DG+TVHIP+ +LN+ Sbjct: 888 TLLDLHRDDLLPAVDDEQVDALYPTSWPQGDLTFPITYSYTPGHSTDGLTVHIPIEVLNR 947 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELP------- 938 VE GF+W +PGL EL IA IKSLPK RR VPAP+ A A + Sbjct: 948 VEAGGFDWLVPGLLTELCIATIKSLPKTWRRQLVPAPDTARAIATWLTERHPSWADLVRG 1007 Query: 939 ------LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNK-------KLKE 985 + + V + + + +P H++I F V N+ L + Sbjct: 1008 GNHAPQFHAEFTQAAYALRSVDIPADAYTPHTLPPHVRIMFSVEHTVNRGRRTVTEVLDQ 1067 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQ------------------------------- 1014 SL+ L+ L QE +++ + Sbjct: 1068 SPSLEHLQRTLSSHAQEAVASAVHTAVSAALAEARAAATPTPVPTGSTTTPRTPVRAQHH 1127 Query: 1015 ----------------SGLHIWSFG--QLPESYE-QKRGNYKVKAWPALVDERDSVAIKL 1055 + W +P + G + V+ +PAL D V + + Sbjct: 1128 ASTSTPPPAPALADSSDIVTDWPTAYPTIPLILDGTGPGGFAVRGYPALAVHPDGVRLDV 1187 Query: 1056 FDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISC 1115 + +Q + L++ + + + L + +PY LI D Sbjct: 1188 LAHDAQQATIHGQAVVELVVAATALSTSRISTRWSPRQALVMSTSPYPTTDALITDLQRA 1247 Query: 1116 GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 + L+ + G + + + +VRA + D IA V LTAV +++ +K Sbjct: 1248 AIRSLL-PDAGTIRDVDTYRERVVQVRARIEDETYRIAGDVAAALTAVKDLDAAIKQHTS 1306 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 + + L+DI+A L+Y GF++ + +RY++A RL+K HRD+ Sbjct: 1307 LALLATLNDIRAIRDALIYPGFISRTPPDHVRHLVRYVRAQIHRLDKAVDSVHRDQEVSW 1366 Query: 1236 KVENVQQAWQQWINKLPPARR-EDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQA 1294 ++ V + + + + E + ++RWMIEELRVS +AQQLGT +S+KR+L+A Sbjct: 1367 RLAEVTRMYDAAVASASASPHGVSEQLADVRWMIEELRVSMYAQQLGTARTVSEKRVLKA 1426 Query: 1295 MEQ 1297 + Sbjct: 1427 ITA 1429 >UniRef50_A6WCM9 ATP-dependent helicase HrpA n=5 Tax=Bacteria RepID=A6WCM9_KINRD Length = 1388 Score = 1337 bits (3462), Expect = 0.0, Method: Composition-based stats. Identities = 658/1327 (49%), Positives = 891/1327 (67%), Gaps = 73/1327 (5%) Query: 41 DAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAG 100 +A + + ++ A +V R A+ P + YP+ LPVSQ+K I A+RDHQV++VAG Sbjct: 65 EAFEEELPALEQQTVAAEQRVTARAASVPALRYPEQLPVSQEKDRIAAALRDHQVIVVAG 124 Query: 101 ETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF 160 ETGSGKTTQLPKIC+E+GRG++G IGHTQPRR+AAR VA R+AEEL TE GG +GY VRF Sbjct: 125 ETGSGKTTQLPKICLEIGRGLRGRIGHTQPRRIAARAVAERVAEELGTELGGSVGYAVRF 184 Query: 161 SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR 220 +D V ++++VK+MTDGILLAEIQ+D L+QYDT+IIDEAHERSL IDFLLGYL LLPRR Sbjct: 185 TDTVGEDSLVKVMTDGILLAEIQRDPELLQYDTLIIDEAHERSLTIDFLLGYLARLLPRR 244 Query: 221 PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPI----------------- 263 P+LK++ITSATIDPERFSRHF API+EVSGRTYPVEVRYRP+ Sbjct: 245 PELKLVITSATIDPERFSRHFGGAPILEVSGRTYPVEVRYRPLLAAELAEELLGPADEEE 304 Query: 264 ---VEEADD---TERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL----NKL 313 ++E DD +RDQ + I DAV EL+ E GD+L+F+ GEREIRDTADAL + Sbjct: 305 GDALDERDDLVGDDRDQTEGILDAVRELAAEGPGDVLVFLPGEREIRDTADALADLVKER 364 Query: 314 NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 R TEILPL+ARLS EQ+RVF++ + RRIVLATNVAETSLTVPGI+YV+D GTARISR Sbjct: 365 GFRGTEILPLFARLSAEEQHRVFRTAAHRRIVLATNVAETSLTVPGIRYVVDAGTARISR 424 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 YS+RTKVQRLPIE ISQASANQR GRCGRV++GICIRLYS+ DF SRPEFTDPEILRTNL Sbjct: 425 YSHRTKVQRLPIERISQASANQRAGRCGRVADGICIRLYSQSDFESRPEFTDPEILRTNL 484 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY--KLTPLGR 491 A+VILQMT+LGLGDIAAFPFVE P+ R I DG+ LL ELGA+ +LTP GR Sbjct: 485 AAVILQMTSLGLGDIAAFPFVEPPEPRAITDGLALLAELGALEDARPGDRGVPRLTPTGR 544 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 L++LP+DPRL RMVLEAQ++GC+ + +++ +ALS+QDPRERP++K++ + + H RF + Sbjct: 545 DLARLPIDPRLGRMVLEAQRNGCLHDVLVVVAALSVQDPRERPLEKREQAAQLHARFRHE 604 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 +SDFL ++NLW+YL Q+ LSS+AFRR + + L++LR+REWQD Y+QLR+V ++L Sbjct: 605 QSDFLTYLNLWSYLQHLQRDLSSSAFRRRVKAEMLHFLRIREWQDTYSQLRRVTRDLRFS 664 Query: 612 VN--------------SEPAEYREIHIALLTGLLSHIGMKDADKQ--------------- 642 V + + +H +LL GLL +IG+KD + Sbjct: 665 VEVREPAELGEDELFPAPGYDADAVHRSLLAGLLGNIGLKDVREDTAKAGARTGGRRESR 724 Query: 643 -------EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 EYTGAR A+F++ PGS L ++ P WV+ ELVETSRLW R+ A IDP W+EP+ Sbjct: 725 PTGRQQVEYTGARGAKFAVSPGSSLGRRSPDWVVAGELVETSRLWARVVAAIDPRWIEPL 784 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 A H+++R+YSEP W R + AV+ATE+VT+YG+PIVA R V Y +DP L R+LFIRHALV Sbjct: 785 AAHVVRRSYSEPRWSRKRAAVIATERVTLYGVPIVAGRSVPYGGVDPELARDLFIRHALV 844 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 EGD++TRH FF N +L AE EELEH++RRRDI+VDDE LF FYD R+ DV+S RHFD+ Sbjct: 845 EGDFETRHEFFHRNRELLAEAEELEHRARRRDIVVDDEVLFAFYDARVPADVVSGRHFDA 904 Query: 816 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 875 WWK R PDLL F+ +ML+ E + +S+ +P W QG+L+L L Y F+PG+ ADG+T Sbjct: 905 WWKDERRVRPDLLTFDPAMLVTED-DAVSEEQFPRVWRQGDLELALDYVFDPGSPADGLT 963 Query: 876 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL 935 V +P+ ++N+ ++ WQ+PG R +LV A+I++LPK +R+N PAP+ A FL RV+P Sbjct: 964 VDVPVEVVNRFDDRDLLWQVPGFRHDLVTAMIRALPKELRKNLAPAPDKAARFLERVRPH 1023 Query: 936 ELPLLDSLERELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKD 994 + E E+ R+ G + ED W +VP HL+ TFRV+ L G+ L+ Sbjct: 1024 VDRFWPAFEAEMPRLGDGTEIYAEDVDWTKVPAHLRPTFRVLAGDGSVLATGKDFPRLRA 1083 Query: 995 ALKGKVQETLSAVADDGIEQSGLHIWSF--GQLPESYEQKRGNYKVKAWPALVDERDSVA 1052 +L+ V ETL+A ADD ++++G W+ ++P ++ V ++PALVDE +V Sbjct: 1084 SLETAVVETLAAAADD-VQRTGATSWADLPEEVPPTHTSVVRGSDVTSYPALVDEGTTVG 1142 Query: 1053 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV-LELIDD 1111 ++ F + A G+ RLL+L +PSP + + + L N AKL L P+ + D Sbjct: 1143 LRTFPDAARAAVAHREGVLRLLVLALPSPARRVQDALTNDAKLLLARAPHADAGAVVADC 1202 Query: 1112 CISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLK 1171 + L +A GG V T F L E+V D ++ ++L + K + Sbjct: 1203 AQAAAAQLLDEARGGEVRTAGEFRRLLERVSPRYADLTATAVERTLRVLRTAAAVEKNIS 1262 Query: 1172 GRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDR 1231 + + L+D++ Q GLV+ GFV G +RL D LRYLQ I++RL + +P RDR Sbjct: 1263 RTSSLALVPSLADVREQFTGLVHAGFVAETGVERLPDLLRYLQGIDRRLATMPENPQRDR 1322 Query: 1232 AQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +M + V++ ++ + + ++ IRW +EELR+ FA + T +P+SD+R+ Sbjct: 1323 VRMAEFARVREEHRKRLAR--AGSPVPPELARIRWTLEELRLQKFAPGIPTAHPVSDERV 1380 Query: 1292 LQAMEQI 1298 L+A+ + Sbjct: 1381 LKALAEF 1387 >UniRef50_D2R0M6 ATP-dependent helicase HrpA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0M6_9PLAN Length = 1341 Score = 1334 bits (3454), Expect = 0.0, Method: Composition-based stats. Identities = 529/1343 (39%), Positives = 756/1343 (56%), Gaps = 62/1343 (4%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA- 67 + L+QR+D M RDR R L ++ + + Q + +AK +D A RE Sbjct: 4 YRQLEQRIDRAMQRDRHRLRNTLRAIQTAE--ERGQPFDERLAKFLDSLATSEFKREERA 61 Query: 68 --RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 +P + Y +LP++ K +I+ AI H VV+V GETGSGK+TQLPK C+E+GRGI+G I Sbjct: 62 QIKPRLEYDPSLPITAAKDEIIAAIEAHPVVVVCGETGSGKSTQLPKFCLEMGRGIRGWI 121 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRR+AAR+++ R+ EEL ++ +G+KVRF D D T+VK+MTDG+LLAE Q D Sbjct: 122 GHTQPRRIAARSISARLTEELGSQGSKQVGFKVRFHDSTDDRTLVKVMTDGVLLAETQTD 181 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN--- 242 R L QYDT+IIDEAHERSLNIDFLLGYL LL +R DL++IITSATID ER + HFN Sbjct: 182 RFLDQYDTLIIDEAHERSLNIDFLLGYLHRLLYKRNDLRLIITSATIDAERIAAHFNHTG 241 Query: 243 -NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGER 301 API++VSGR+YPVE+R+ P EE + + + A+ D+ + L +E+ GDIL+F+ ER Sbjct: 242 SPAPIVQVSGRSYPVEIRHEPPAEEQLE-GAELITAVADSTERLLRETRGDILVFLPTER 300 Query: 302 EIRDTADALNKL--NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 +IR L + +ILPLYARLS ++Q +VF +H+ RRIVLATNVAE+S+TVP Sbjct: 301 DIRIAHQVLRGRVASSGAIDILPLYARLSLADQQKVFAAHAKRRIVLATNVAESSVTVPA 360 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I V+D GTARISRYS R+KVQRLPIE ISQASANQR GRCGR++ GIC+RL+ E+DF S Sbjct: 361 ITAVVDTGTARISRYSPRSKVQRLPIERISQASANQRAGRCGRIAPGICVRLFGEEDFQS 420 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 R FT PEI RTNLA+V+LQ AL LG + FP ++ P I+DG + L EL AI Sbjct: 421 RDPFTSPEIQRTNLAAVLLQSLALDLGPLEEFPLLDVPRSEAIRDGFKTLFELQAIDDKR 480 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 + LTPLG +L++LPVDP +ARM+L A + + +II +AL +QDPR+RP DK Q Sbjct: 481 E-----LTPLGLKLARLPVDPSIARMLLAASAEHALADVLIIAAALEVQDPRDRPSDKAQ 535 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 + H ++ D +SDFL++++LW++L ++ LS R + ++L+ RVREWQD++ Sbjct: 536 EASAAHAQWSDPDSDFLSWLHLWDFLHGLKEKLSRGQLRMAMQRNFLSEPRVREWQDVHR 595 Query: 600 QLRQVVKELGIPVNS------------------------------------------EPA 617 QL ++ E G+ V E Sbjct: 596 QLLEMATEQGLQVGKRISPQIPPPHDHEEELQQQPTGRTPQRGRQPGRGSKNEASRVESP 655 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 Y IH ALLTGLL+ I + D EY ++ ++PGSG+ P W++ AELVETS Sbjct: 656 AYLAIHRALLTGLLTSIARRT-DTSEYQACGGQKYFLWPGSGVQHSRPAWIVAAELVETS 714 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNY 737 R + R ARI PEW+E +A HLI + YS+ W +G MA+E++ + GL + A R V Sbjct: 715 RKFARSVARIQPEWLEELALHLINKHYSDYRWSEKRGQAMASERLVLAGLTLAADRPVPL 774 Query: 738 SQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 + IDP+ RELFI L G + A R+N K+ E+ L K+RRRD+++D + L + Sbjct: 775 APIDPSAARELFIEQGLAAGLLPRKPAVVRDNEKVLEEIARLAAKTRRRDLVIDPQKLVD 834 Query: 798 FYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNL 857 FY +R+ +VI + WW K + L + L+ + E+ K YP+ Sbjct: 835 FYGKRLPREVIDMNSLERWWNKATNLERKTLQLTMNDLLDDEIERDVKTKYPDKLEVPGA 894 Query: 858 KLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRN 917 L L+Y FEPG ++DGVTV +P ++ + W +PGL E + ALI++LPK +RR Sbjct: 895 SLPLAYHFEPGTESDGVTVEVPAAAVSHLSAERLAWLVPGLLAEKIEALIRTLPKDIRRK 954 Query: 918 FVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVD 977 +PAP A ++ E LL L +L TG ++ + + ++P HL + RV D Sbjct: 955 IIPAPQVAREIASTLRFAEGRLLQVLATKLASHTGDRIEADSFDLTRLPPHLAMNVRVKD 1014 Query: 978 DKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYK 1037 + K + R ++K QS L W+FG LP G K Sbjct: 1015 AEGKVITASREWTEVKAVAGPAAAAAAPVATSGRWSQSKLKSWTFGDLPSEVVTTAGGVK 1074 Query: 1038 VKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGL 1097 + +PA+VD+ DSV+++L + PL+ + G+RR L + I+ LP AKL + Sbjct: 1075 LARYPAIVDDGDSVSLQLAETPLQAEALSRGGMRRFLAIEQNREIRGHVSWLPQLAKLRM 1134 Query: 1098 YFNPYGKVLELIDDCISCGVDKLI-DANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQV 1156 + P L D + + + + + L D+AK + Sbjct: 1135 WSAPLCSKFPLDDQLQLLIASRALAMGYPDLPRSADTYKLHISMATKHLPAAAQDVAKLL 1194 Query: 1157 EQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAI 1216 + A ++ T A L+D+KAQ+ L GF+ + L RY Q I Sbjct: 1195 PLLFEAYHQARLGIEQFKLSTAAYALADVKAQLAMLTPDGFLAATPWNWLLQFPRYFQGI 1254 Query: 1217 EKRLEK-LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSY 1275 RL K LA RD+ VE +Q++W + + + ++E R+ IEELRVS Sbjct: 1255 SARLRKLLAGGLARDKQNFAGVEKLQKSWSERVERERAQGTAPAALEEFRYSIEELRVSL 1314 Query: 1276 FAQQLGTPYPISDKRILQAMEQI 1298 FAQ+LGT P+S +R+ + + I Sbjct: 1315 FAQELGTSIPVSVQRLEKNLAAI 1337 >UniRef50_A0LMI5 ATP-dependent helicase HrpA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LMI5_SYNFM Length = 1309 Score = 1334 bits (3452), Expect = 0.0, Method: Composition-based stats. Identities = 494/1293 (38%), Positives = 749/1293 (57%), Gaps = 68/1293 (5%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R+ I YP +LP+ + + +IL AI ++QVV++ GETGSGK+TQ+PK+C+E GRG +G Sbjct: 18 RDEPFSPIRYPSDLPIVEHRGEILGAIAENQVVVITGETGSGKSTQIPKMCLEAGRGARG 77 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 +IG TQPRR+AA T+A+R++EEL +GYK+RF D + +T +K MTDGILLAE Q Sbjct: 78 MIGCTQPRRIAAVTLADRVSEELAETGPRRVGYKIRFHDRTTRSTRIKFMTDGILLAEAQ 137 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 DR YDT++IDEAHER+LNIDFLLG +K +LPRRP+LK+IITSATIDP +FS+ F + Sbjct: 138 SDRHFRAYDTLVIDEAHERTLNIDFLLGLIKRILPRRPELKVIITSATIDPGKFSKAFQD 197 Query: 244 APIIEVSGRTYPVEVRYRPIV----EEADDTERDQLQAIFDAVDELS----QESHGDILI 295 APIIEVSGRTYPV+VRYRP EAD + + A DEL + GDIL+ Sbjct: 198 APIIEVSGRTYPVDVRYRPPANGEGPEADAEDITHIDQAVAATDELKGSGQEGRRGDILV 257 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 FM E +IR+T L++ +T ++PL+ R++ ++Q RVF + +I++ATNVAETS+ Sbjct: 258 FMPTESDIRETVQRLDEKRYFNTVVIPLFGRMAAADQKRVFLPTTEDKIIVATNVAETSI 317 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+P IKYVID G AR+S+Y+ R++ Q LP+ +S+ASA+QRKGRCGRV GICIRLYS + Sbjct: 318 TIPRIKYVIDTGLARVSQYNTRSRTQSLPVARVSRASADQRKGRCGRVEAGICIRLYSVE 377 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 D+L+RP +T PEILR+NLA VIL+M L LG I FPF++ P ++DG +L ELGA+ Sbjct: 378 DYLARPLYTAPEILRSNLAEVILRMLFLRLGSIQEFPFLDPPSPSAVKDGFAVLRELGAV 437 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 +LT +GR +++LP+DPRL+RM+L+A++ G V E I+ +ALS+QDPRERP+ Sbjct: 438 DEHR-----RLTAMGRVMARLPLDPRLSRMLLQAREEGAVTELTILAAALSVQDPRERPL 492 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKA------------------------ 571 DK+ +D+ H F D SDF+ + +W + +A Sbjct: 493 DKETQADQAHAVFRDTRSDFVTLLKIWEKCWPRCEAAIASSEARPQDPDRGAAANGPTRH 552 Query: 572 -----------------LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG-IPVN 613 S + R+ CR +L+Y R+REW+D++ ++R++++E+G P N Sbjct: 553 DVALGTRGENRLVRYASRSQSQLRKFCREHFLSYRRMREWRDVWEEIREILEEMGGFPEN 612 Query: 614 SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAEL 673 S+PA Y IH ++++G LSHI M+ +K YTG +N + +FPGSGLF + WV AE+ Sbjct: 613 SDPAGYEAIHRSVVSGYLSHIAMR-KEKNIYTGTKNRQVMLFPGSGLFNRGGAWVTAAEV 671 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAAR 733 V+T+RL+ R+AA +DPEW+E + HL + T EPHWER +G V A E+VT+YGLP+V R Sbjct: 672 VQTTRLFARMAANVDPEWLERLGGHLCRSTVFEPHWERKRGQVTAFERVTLYGLPVVDRR 731 Query: 734 KVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDE 793 KVN+ + PA R++FIR AL+E D + F N L ++EE+E K+RRRD+LVD+E Sbjct: 732 KVNFGAVRPAEARDIFIRSALIEYDVPKPYGFLDHNRDLVRQIEEIESKTRRRDLLVDEE 791 Query: 794 TLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWH 853 T+F FYD+R+ + R D W K + L +S +++ + +P+ Sbjct: 792 TVFRFYDRRLPA-ICELRSLDKWIKDHGGD--HFLRMTESDILRTEPDFGELELFPDRLK 848 Query: 854 QGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKP 913 +++L L Y F PG + DG+T +P+ +L ++ FEW +PG+ E + L+K LPK Sbjct: 849 LEDVELPLRYAFRPGEEDDGITATVPVHVLPRLAPQSFEWLVPGMLAEKLAILLKGLPKS 908 Query: 914 VRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITF 973 RR VP A + ++ + L +R + GV+V + W +P HL++ Sbjct: 909 QRRQLVPVGETAARLIEMLRRRSGDFHEQLSLCVRELAGVSVPVDQWRRIDLPPHLRMRL 968 Query: 974 RVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKR 1033 + + L GR L +LK K ++ L A E+ GL WSFG+LPE + Sbjct: 969 EITGPEGNLLGVGRDLLELKSLAVEKHEDRLWEQARAAWEREGLTSWSFGELPERVPIGK 1028 Query: 1034 G--NYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPN 1091 A+P LV E + A++L+ P E +A GLR L L +KY Sbjct: 1029 DALGLTRYAYPGLVAEGQTAAVRLYAEPEEATRASAGGLRLLFELTFGDELKYFRRDWTF 1088 Query: 1092 KAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVD 1151 K G E + + +L + + + + F + ++ L Sbjct: 1089 SKKTASMLFFMGGREEAVRCLHDYILRELFELDAPGLPSYGRFYDVVRRLTGRLGAAARA 1148 Query: 1152 IAKQVEQILTAVFNINKRLKGRVDMTMALGLS-----DIKAQMGGLVYRGFVTGNGFKRL 1206 + +VE ++ + ++ M A + + ++ LV F+ +G R+ Sbjct: 1149 LLDEVEAVIGERESTRSEIERYKRMAEANPAAVRCLLGLSRELVTLVPGNFLVQSGSDRM 1208 Query: 1207 GDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED--VKEI 1264 + RYL+A+ R E+ P +DR + ++ ++ ++ ++ E +E Sbjct: 1209 RELPRYLKALRLRAERAYAAPEKDRLKAGQIAPYEKHLEEMRTRISEHSEESPRRLYEEY 1268 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 R M+EE ++S FA ++ T + IS KR+ + +E+ Sbjct: 1269 RTMLEEFKISLFAPEIKTRFRISAKRLDEKLEE 1301 >UniRef50_D0KXD2 ATP-dependent helicase HrpA n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXD2_HALNC Length = 1394 Score = 1325 bits (3431), Expect = 0.0, Method: Composition-based stats. Identities = 562/1369 (41%), Positives = 786/1369 (57%), Gaps = 86/1369 (6%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQA-IFQEMAKEIDQAAGKVLLREAARPE 70 L+ L L L D+ SRRL G ++ + A E+ + +A + R +A Sbjct: 30 LRANLAELPLVDQPALSRRLAGAERALQQNRLDAGRLAELVTAFEASAALLTERRSAELN 89 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 I YP LPVS +++ I++ IR H VVIVAGETGSGKTTQLPK+ +ELG G+KG IGHTQP Sbjct: 90 IDYPAELPVSGQREAIMDLIRAHPVVIVAGETGSGKTTQLPKMLLELGFGVKGQIGHTQP 149 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR VA+R+AEEL G +GYKVRFSD ++ V +MTDGILLAEI D L++ Sbjct: 150 RRIAARNVASRLAEELGVTGAGVVGYKVRFSDQTRASSRVAVMTDGILLAEIHSDPDLLR 209 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------- 243 YD +IIDEAHERSLNIDFLLG ++ LL RRPD +++ITSATID RF+RHF Sbjct: 210 YDALIIDEAHERSLNIDFLLGIVRRLLDRRPDFRLVITSATIDTARFARHFAGTDASGEP 269 Query: 244 --APIIEVSGRTYPVEVRYRPIVEEADD------TERDQLQAIFDAVDELSQESH----G 291 AP+I V+GR++PVE RYR + +D ERD A+ AVDEL E+ G Sbjct: 270 QPAPVITVAGRSFPVEYRYRSLTAPQNDNDTETEEERDLPAAVVAAVDELHAEAQTTGGG 329 Query: 292 DILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVA 351 DIL+F+ GEREIR+ A L + LRHTEILPL+ARLS +EQ R+F H+GRRIVL TNVA Sbjct: 330 DILVFLPGEREIRECAHRLGRHGLRHTEILPLFARLSAAEQQRIFAQHTGRRIVLTTNVA 389 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLTVPGI YVID G ARI+RYS R++VQ+L +E ISQASANQR GRCGR++ G+CIRL Sbjct: 390 ETSLTVPGILYVIDSGLARIARYSPRSRVQKLAVEAISQASANQRAGRCGRIAPGVCIRL 449 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 + E D+ RP FTDPEILRTNLASV+L+M L LG+ FPF+E PD R + RLL E Sbjct: 450 FDEADYAGRPAFTDPEILRTNLASVVLRMIELRLGEPEHFPFIEPPDSRQLAGARRLLFE 509 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE--AQKHGCVREAMIITSALSIQD 529 LGA+ ++TPLGRQL++LPVDP L RMVL ++ + +I+ + LSIQD Sbjct: 510 LGALDE-----RQRITPLGRQLARLPVDPTLGRMVLSNLSKADATSVDILIVVAFLSIQD 564 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 PRERP D QA+D+ + F +SDF + LW+ + + R + +L+Y Sbjct: 565 PRERPADHAQAADQAQQAFRLADSDFAGILALWDQWHTVVRHENQRKRRDWAKKHFLSYN 624 Query: 590 RVREWQDIYTQLRQVVKELG---------IPVNSEPAE------YREIHIALLTGLLSHI 634 R+ EW D++ QLR+ E+G +PV ++ E +H A+L GLL+ I Sbjct: 625 RLLEWHDLFGQLREQADEIGRVKLPDPLPLPVMTDGDEAPLRARLDALHQAMLPGLLAQI 684 Query: 635 GMKDADKQE---------------------YTGARNARFSIFPGSGLFKKPPKWVMVAEL 673 G++D + Y GA N RF IFPGS L K PKW+M AE+ Sbjct: 685 GLRDEATRTDKNTPKDSRDQRGKKQRTPTIYIGANNRRFQIFPGSQLAKTQPKWLMSAEI 744 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAAR 733 VET+R++ R+ A I+P W+E +A HL R YSEP W++ G V A E V ++GLPIV R Sbjct: 745 VETTRVYARMNATINPRWIEDMAAHLTTREYSEPRWDQRGGRVAAFETVKLFGLPIVTKR 804 Query: 734 KVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDE 793 ++++ +IDP R +FIR ALVEG++ + F+R N L E+ E+E ++RR D+L+DD+ Sbjct: 805 RIDFGRIDPLGARAIFIRAALVEGEFDSGLKFWRHNQALIDEIREIEARNRRPDLLIDDQ 864 Query: 794 TLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWH 853 TLF+FY+ + +V A W K ++ + PD+L + L+ ++ +P+ Sbjct: 865 TLFDFYETHLPAEVYDAHTLVRWLKTITPKQPDVLCMTRDDLLAREPVELDPAGFPDRLS 924 Query: 854 QGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKP 913 G L L+Y F PG+ DGVT+ +PL L Q++ IPGLRRE + ALI+SLPK Sbjct: 925 MGAFSLPLAYHFAPGSADDGVTLRLPLAALKQIDADRASHLIPGLRREKIEALIRSLPKA 984 Query: 914 VRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITF 973 RR+FVPAP +A + RV L + +L RMTG + + + ++ HL++ F Sbjct: 985 DRRHFVPAPEFAASVNERVSVDRGGLPAQVAEQLARMTGHKITADAFDERRLEPHLRMRF 1044 Query: 974 RVVDDK-----NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPES 1028 ++D K + + R L L+ + L +E+ L WSFG+LPES Sbjct: 1045 ALIDAKQTDPDKQIIDADRDLSALRARHAAAAERALVERTRHRLERDDLIDWSFGELPES 1104 Query: 1029 YEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK 1088 + ++ A+PAL+D+ D ++LFD P A +G+ RL+L+ + I++L + Sbjct: 1105 LTVEELGAELTAYPALIDQGDCAEVRLFDAPERAVLAHRSGVVRLMLIALGEQIRHLSQY 1164 Query: 1089 LPNKAKL---GLYFN---------------PYGKVLELIDDCISCGVDKLIDANGGPVWT 1130 L + L L ++ P + I+ + KL + Sbjct: 1165 LKQERSLDPARLQYSQWSNTRPLPAFGLTLPQRRDAAFDQALIARSIAKLAVDALPFIRD 1224 Query: 1131 EEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMG 1190 E F A E+++ +L+DTV +A Q+ I + +LKGR+ ++ +I Q Sbjct: 1225 ESTFRARVERLKPQLDDTVRRLAAQIRTIFAQHQALRAKLKGRLPLSQIEAAREIAEQFD 1284 Query: 1191 GLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINK 1250 L Y G + L + RYL A EKRLEK+ P RDR ++ V I Sbjct: 1285 LLFYPGMIWNTPQTLLDNLPRYLTAAEKRLEKIDRHPERDRMLRVQFMPVCARVTDKITA 1344 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 P + ++ +EE RV+ FAQ+L K I QA++Q+S Sbjct: 1345 TAPTPEAFAALNQLHEQLEEWRVATFAQELARKGAPGAKEIEQAIKQLS 1393 >UniRef50_C8N990 ATP-dependent helicase HrpA n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N990_9GAMM Length = 1310 Score = 1319 bits (3413), Expect = 0.0, Method: Composition-based stats. Identities = 550/1313 (41%), Positives = 767/1313 (58%), Gaps = 54/1313 (4%) Query: 19 LMLRDRLRFSRRLHGVK-KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNL 77 ++ RDR + ++ + + + A E + V +R AA P+ +L Sbjct: 19 VLCRDRHALRQLHRQIRERERRGQPADRLRARFAAEYAASTAAVEVRRAALPQPKLSADL 78 Query: 78 PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAART 137 PV K DIL IR+HQVVI++GETGSGKTTQLP++C+ LG G +G I HTQPRR+AAR+ Sbjct: 79 PVLAAKNDILRLIREHQVVIISGETGSGKTTQLPQLCLALGLGARGTIAHTQPRRIAARS 138 Query: 138 VANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIID 197 VA RIAEEL T G +GY+VRF + SD T++KLMTDG+LLAE D L QY+ II+D Sbjct: 139 VAARIAEELDTPLGDAVGYQVRFDEKTSDATVIKLMTDGMLLAETLSDPYLAQYEVIIVD 198 Query: 198 EAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVE 257 EAHERSLNIDFLLGYL L RRPDLKIIITSATID E+F+ HF AP++ VSGRTYPVE Sbjct: 199 EAHERSLNIDFLLGYLHRLAARRPDLKIIITSATIDAEKFAAHFGGAPVLNVSGRTYPVE 258 Query: 258 VRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRH 317 +RYRP E + D AI AV EL Q DIL+F+ ER+IR+ AD L + LR Sbjct: 259 IRYRPPGE-----DEDTADAILRAVAELDQHGRNDILVFLPSERDIREAADRLRREQLRD 313 Query: 318 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 T++LPL+ RLS ++Q VF+ + RRIVLATNVAETSLTVP IK VID GTARISRYS R Sbjct: 314 TDVLPLFGRLSLADQQAVFRPQAPRRIVLATNVAETSLTVPRIKAVIDTGTARISRYSLR 373 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 TK QRLPIEPISQA+ANQR GRCGRVS GICIRLYSE+D+ RP +T+PEILRTNLA++I Sbjct: 374 TKTQRLPIEPISQAAANQRAGRCGRVSSGICIRLYSEEDYAQRPAYTEPEILRTNLAAII 433 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 LQM L LGDIAAFPFV+APD+R I DG RLL EL A A +LTPLGR +++LP Sbjct: 434 LQMLVLKLGDIAAFPFVDAPDERQINDGYRLLYELQATDE-----ARRLTPLGRHMARLP 488 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 VDPR AR+++ A+K GC+++A+I+ +ALSIQDPRERP ++ +D+K F DK SD+ Sbjct: 489 VDPRFARILVAAEKSGCLQDALILVAALSIQDPRERPFGQEARADQKQGEFADKSSDYQT 548 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS--- 614 +NL+ ++++ S+N R+ C+ YLN R+REW+++ QL + +E + ++S Sbjct: 549 LLNLFAAYQRERRSASNNRLRQWCKNYYLNPQRMREWRELVNQLLRDSREQKLHLDSAHP 608 Query: 615 -----------------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 E + +H ALLTG L +G+ D ++Y R++RFS+FP Sbjct: 609 AAPKNDLPDGAKGWLALENPQIETLHRALLTGFLDQVGLWDEQNRDYLRPRHSRFSLFPA 668 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVM 717 S L KKPP+ VM A +VET R + R A I +E +A HLI+ YS PHW + G V+ Sbjct: 669 SVLAKKPPQAVMAASIVETQRTYARTCAPIQLAELEHLAAHLIRHQYSNPHWSKKAGNVL 728 Query: 718 ATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVE 777 A++ T+YGLPIVA R V Y++ DPAL E+FI ALV G+ TR +N L +E Sbjct: 729 ASQTTTLYGLPIVAGRNVPYARHDPALAHEIFIHDALVPGELNTRLKVIAQNRALIETLE 788 Query: 778 ELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK 837 E EHK+R R IL D+ FY +R+ V S + W KK L ++ L+ Sbjct: 789 EREHKTRSRGILADESQQAAFYMERLPETVHSVVTLEQWAKKHGEA---ALAMREADLLL 845 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 E I + DYP KLRL Y F+PG ADG+TV+IPLP LN ++ FE +P Sbjct: 846 SD-ETIDEADYPTSLTINGQKLRLEYHFDPGGAADGITVNIPLPALNALDARAFERLVPA 904 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDR 957 + + AL+++LPK RR VP P +A+A R+ + PL ++ + + G + Sbjct: 905 MLPAKIEALLRALPKVWRRQLVPIPAFAQAVSERIAGDDAPLHTAIRAAVYAIKGTAIPE 964 Query: 958 EDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQS-G 1016 + + +++ DH ++ +R++D KN+ L E R L L+ + Sbjct: 965 DAFDENKIDDHHRMNYRLLDAKNQPLAESRDLAALQAEYSDSAAAQFRRRSQSRHADDAP 1024 Query: 1017 LHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLL 1076 + W + +LP G + +PAL E ++L D+P A + LL Sbjct: 1025 ITDWQWDELPAQETLPNG---ITGYPALTLEDGKHYLRLHDDPERAASAHHAAVHALLAD 1081 Query: 1077 NIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAA 1136 + + IKYL + LP ++ L++ G L DD I+ + + G P T + A Sbjct: 1082 KLQAKIKYLRKNLPGYTQMALHYRKIGSDSTLADDIIARLLAHVCLQGGVP-RTRAAWEA 1140 Query: 1137 LHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRG 1196 + EL ++A ++ +IL A + ++L ++ SDI+A + L+Y Sbjct: 1141 ALARGERELIPAASELATKLTRILAAYSDAKQQL---HNLKQPAIKSDIEAHLARLIYPE 1197 Query: 1197 FVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL----- 1251 F+ + + L R L A KR+EK +DP +D + ++ + + QQ + K Sbjct: 1198 FIRDSDSRDLDLIDRALAATLKRIEKARLDPLKDLQRQQELASWEATLQQTLAKHGMTRA 1257 Query: 1252 --PPARREDEDVKEI---RW-MIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 P R + W + E R+ +AQ+LG+P S KR+ +A E++ Sbjct: 1258 SQTPPRGTPASTRAALLDYWRLTEAWRIQTYAQELGSPLKASPKRLQEAAEKL 1310 >UniRef50_A8ZWI2 ATP-dependent helicase HrpA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWI2_DESOH Length = 1307 Score = 1317 bits (3408), Expect = 0.0, Method: Composition-based stats. Identities = 491/1314 (37%), Positives = 740/1314 (56%), Gaps = 32/1314 (2%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE- 65 + A + + + DR RRL + + P + A+ +E+++ I + G V LR Sbjct: 4 NSIKAAYRLANQALRVDRQYALRRLSAISGGRRPLSGPALEREVSQLIARLEGSVALRAF 63 Query: 66 --AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 P + LP++ ++ +I+ AI+ H VVIV+G TGSGKTTQ+P+ C+ G G G Sbjct: 64 RYDRFPRLPSDPALPIAPRQDEIIAAIQKHPVVIVSGATGSGKTTQIPRYCVAAGCGRDG 123 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 IG TQPRR+AA +VA RIA+EL T G +G+K+RFSD + ++K+MTDGILLAE Q Sbjct: 124 RIGCTQPRRIAAVSVAARIADELGTASTGLVGHKIRFSDTTAGTHLIKIMTDGILLAEAQ 183 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 +DR L +YD I++DEAHERSLNIDF+LG LK++L +R DL+++ITSATID E+FS F+ Sbjct: 184 RDRYLNEYDAIVVDEAHERSLNIDFILGILKQVLAKRDDLRVVITSATIDTEKFSAAFDQ 243 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTE-RDQLQAIFDAVDELSQESH-GDILIFMSGER 301 AP+IEVSGR YPVE++Y P E + E ++ V+ + + S GDIL+FM + Sbjct: 244 APVIEVSGRMYPVEIKYTPPEPEFGNGEPPTYVELAVAEVERVCRRSPFGDILVFMPTAQ 303 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 +IR+T D + + ++PL+ARLS ++Q RVF GR+I++ATN+AETS+T+PGI+ Sbjct: 304 DIRETCDMIEGRRMPGATVMPLFARLSGADQARVFSRPPGRKIIVATNIAETSITIPGIR 363 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YV+D G ARIS Y+ RT+ L + ISQ+S QR GRCGRV G+C+RLY + DF SR Sbjct: 364 YVVDTGLARISYYNPRTRTTSLSVRSISQSSCQQRAGRCGRVENGVCVRLYDQKDFESRH 423 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 FT PE+LR NLA V+L+M AL LG FPFV+ P R+I+DG L ELGAI + Sbjct: 424 LFTPPEVLRANLAEVVLRMMALKLGTPDTFPFVDRPADRSIRDGYDTLVELGAIQAVSRG 483 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 Y+LT GR ++++P DPRLAR+++EA K+GC+ A+++ SALS+QDPRE P ++ + + Sbjct: 484 G-YRLTETGRLMAKIPADPRLARILIEAGKNGCLEPAVVVVSALSMQDPRETPAERLKEA 542 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 H F SDF+ +N+W E + + +R CR +L++ R+REW+D+Y Q+ Sbjct: 543 RAAHAAFAHPASDFITLLNIW----EACRDKGTGQLKRFCRDHFLSFRRMREWRDLYAQM 598 Query: 602 RQVVKELGIPVNSEPAE--------YREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 +Q+ KE G+ + Y H LL+G LS+I K +K Y GA Sbjct: 599 QQIAKEHGLGTGLAAIDRHQDPDGFYAAFHRTLLSGYLSNIAEK-KEKNIYNGAGGKTMM 657 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 IFPGS LF P +M AELVETSRL+ R A ID +W+ P+A L + TY P W R++ Sbjct: 658 IFPGSALFNTEPSMIMAAELVETSRLYARTVAAIDRQWIRPLAGDLCRETYLAPRWRRSR 717 Query: 714 GAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLR 773 V+A + T++GL + V+Y ++DPA ++FIR ALV GD + +F N +L Sbjct: 718 EEVVADCRTTLFGLTVDFRESVSYGRVDPAGAADIFIRSALVNGDVKQPLSFMAHNTRLI 777 Query: 774 AEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKS 833 E E+E++ RR+ L D+ LF FY QR+ +DV S R K+++ + D L ++ Sbjct: 778 EEGVEIENRLRRKTFLAGDDDLFAFYRQRLDNDVYSMRTLK---KRIAEQGVDFLKMSRA 834 Query: 834 MLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEW 893 +IKE + +P+ H G + Y F+P D DGVTV IP V+ +W Sbjct: 835 DVIKEEPDPEEMAGFPDTLHLGREQFACLYAFDPAKDEDGVTVRIPAHRAPDVDPDHLDW 894 Query: 894 QIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGV 953 +PGL E + AL+K LPK R+ VP E + + PL+ +L +R+ GV Sbjct: 895 LVPGLLTEKIAALVKGLPKAYRKQLVPISRTVEIITTEMPQRKRPLVSALSLFIRKRFGV 954 Query: 954 TVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIE 1013 V W +++P+HL + D++N++++ R+ L+ + + A E Sbjct: 955 EVPASAWQPEKLPEHLHARIAITDERNREIEVSRNRDILRQSFDQGLPADSLAPLKRQWE 1014 Query: 1014 QSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRL 1073 ++G W FG LPE G ++ +P LVD V ++LF++ + A G++RL Sbjct: 1015 KTGCRTWEFGDLPEEIVADAGKRHIRLFPGLVDRTGHVDLRLFESRSKALAAHVQGVKRL 1074 Query: 1074 LLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEG 1133 LLL + +++L + + L G L D L+ + + T Sbjct: 1075 LLLALSREVRFLGRDVALSKQAALKAVLLGGAKSLEQRMQQKVADNLLAVS---IRTAAE 1131 Query: 1134 FAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLK-----GRVDMTMALGLSDIKAQ 1188 F AL +V L + + VE ++ A + ++++ R AL L I+A Sbjct: 1132 FEALAIEVPGRLYERAHQLRTAVETVVGAYHDARRQIQTLVASQRAGGDTALVLKTIEAD 1191 Query: 1189 MGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI 1248 + LV FVT L RY+QA R + + DR + KV + + Sbjct: 1192 LATLVPETFVTIYHIADLERLPRYMQAAVIRARRAVENLAGDRQKAEKVAWSCAVLDRLV 1251 Query: 1249 NKLPPARREDE--DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 +L P +++ V++ WM+EE +VS FAQ+L T +P+S KR+ + + +I G Sbjct: 1252 AELLPDTSDEKRRAVEDFFWMVEEYKVSVFAQELKTAFPVSKKRLEENLREIEG 1305 >UniRef50_A5WE54 ATP-dependent helicase HrpA n=4 Tax=Moraxellaceae RepID=A5WE54_PSYWF Length = 1438 Score = 1300 bits (3364), Expect = 0.0, Method: Composition-based stats. Identities = 550/1420 (38%), Positives = 793/1420 (55%), Gaps = 144/1420 (10%) Query: 4 QQKLTFTALQQRLDSLMLRDRL---RFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 KL + L ++ +DR R R L K +P + + ++ Sbjct: 38 SSKLAVFESMKELP-VLAKDRHFLSRLQRELSRPPKNADPKVLADKQAKFEQIKQRSQHV 96 Query: 61 VLLREAARP---EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 V R + P D LPVS++ DI++AI DHQV+IVAGETGSGKTTQLPK+ M Sbjct: 97 VQQRIDSIPHNLPQLLNDELPVSKRSTDIIQAITDHQVIIVAGETGSGKTTQLPKLAMLA 156 Query: 118 GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 GRGI G IGHTQPRRLAAR+VANRIAEEL G + +K+RF++ S ++VKLMTDGI Sbjct: 157 GRGITGQIGHTQPRRLAARSVANRIAEELGEPLGETVSFKIRFNEQGSAQSVVKLMTDGI 216 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE+ DR L +YDTIIIDEAHERSLNIDF++GYLK+LLP+RPDLK+IITSAT+D RF Sbjct: 217 LLAELGHDRFLTRYDTIIIDEAHERSLNIDFIMGYLKQLLPKRPDLKVIITSATLDTGRF 276 Query: 238 SRHFN----------NAPIIEVSGRTYPVEVRYRPIVE---------EADDTERDQLQAI 278 S +F AP+I+V GR YPVEVRYRP+ + DD E + +A+ Sbjct: 277 SEYFAQYDPVKKRMVPAPVIDVEGRGYPVEVRYRPLTDTPVSSSDDDSYDDFEDNLPRAV 336 Query: 279 FDAVDELSQE-------SHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSE 331 AV+E ++ H DILIF + E EIR+ + L + RHTE+LPL+AR + +E Sbjct: 337 VAAVEECFEDAIAKGHPEHADILIFAATEAEIREMQEVLVQHGPRHTEVLPLFARQTYAE 396 Query: 332 QNRVFQSHS-GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 Q R+FQ GRRIV+ATNVAET+LTVPGI+YVID G ARISRYSYR++VQRLPIE ISQ Sbjct: 397 QQRIFQPSGRGRRIVIATNVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQ 456 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA 450 A+ANQRKGRCGRV+ G+CIRLYSE+DF SRPEFT+PEILRTNLASVILQM +L LG + + Sbjct: 457 AAANQRKGRCGRVAPGVCIRLYSEEDFASRPEFTEPEILRTNLASVILQMASLRLGTVES 516 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQA----------SAYKLTPLGRQLSQLPVDP 500 F F+E PD R ++DG +LL+ELGA+T + KLT +G++++++P+DP Sbjct: 517 FDFIEPPDSRLVKDGRKLLDELGALTPKNSDSKKPVAKQTLNDVKLTRIGQKMARMPIDP 576 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 RLARM++ C+ E +II +AL++QDPRERP +K+ +D+KH F ++SDFL +++ Sbjct: 577 RLARMLVAGSDFDCMLEMLIIVAALAVQDPRERPAEKRAQADQKHAIFRQEDSDFLFYLS 636 Query: 561 LWNY-LGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS----- 614 LWN G LSS+ + + YL++ R+REW+ Y QL Q+V +L + +S Sbjct: 637 LWNALYGGGSNKLSSSQRKSFAKKHYLSFPRLREWEKTYRQLEQMVTDLKLLTDSGTEHK 696 Query: 615 --------------------------------------------EPAEYREIHIALLTGL 630 +Y +H ALLTGL Sbjct: 697 DKPHTQNDAAKGQRHANQAVTVAKSVATDLIVDNASDNKVNEAQRAVKYANLHRALLTGL 756 Query: 631 LSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPE 690 LS I K + EY AR + IFP S +FK+ P WVM E+VETS+++ R A+I+PE Sbjct: 757 LSVIAHKTDQRGEYLAARQQKAKIFPASTVFKQVPAWVMAFEIVETSQVFMRTVAKIEPE 816 Query: 691 WVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI 750 W+ +L+K Y EPHW + G V A +++++GL +VA + NY QI+ RE+FI Sbjct: 817 WIISAGGNLLKYHYFEPHWSKKTGRVRAYAQISLFGLIVVAKQLTNYEQINLEESREIFI 876 Query: 751 RHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISA 810 R LV G+ + F + N+ A+VE +E K RRRD+LVD+E L++FY+++I + S Sbjct: 877 RDGLVTGNLGRQAPFLQHNMDKIADVERIEEKLRRRDLLVDEEDLYQFYERKIPEHIASR 936 Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 + F+ W V ++ P L F ++KE A + ++P W G+LKL L Y F+P ++ Sbjct: 937 KAFEDWRADVEKDDPKFLFFTDEDVLKETAP--TTGEFPEVWQLGDLKLPLKYVFDPASE 994 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 DGVT+ +PL L Q++ W +PG R ELV+ L+KSLPK +RR VP PN A++ Sbjct: 995 DDGVTIRVPLAALPQLDAIELLWGVPGWRYELVLQLLKSLPKEIRRKIVPIPNTADSLYD 1054 Query: 931 RV-KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSL 989 + K + LL+ L + L+R + V ED++ + +L+ VVDDK + +++GR L Sbjct: 1055 ELEKNHQQGLLNQLCQALQRRGVLGVKPEDFNPSAIDRYLQPQICVVDDKKRVIEKGRDL 1114 Query: 990 QDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKR----GNYKVKAWPALV 1045 + L+ K + LS+ D G+H PE + + +K + ALV Sbjct: 1115 KALQQRHASKTSQALSSSQDT----QGVHT----SFPEHFRFSKNRHSAGIVMKEFSALV 1166 Query: 1046 DE--RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 + ++V I F + +A G+ L+ + + K L ++ KL F P G Sbjct: 1167 ADEAGEAVTIHQFTDVTAALKAHRKGVLTLIRSKLGAKQKQLTSQIDKTFKLA--FAPLG 1224 Query: 1104 KVLELIDDCISCGVDKLIDANGG-----------------------PVWTEEGFAALHEK 1140 + +L + +D ++A + F EK Sbjct: 1225 DMEKLKTIVVDATLDATLEAYAPSFQDHDEALPDNADKVAEKLANQLPLDDTEFEKTSEK 1284 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 V A + + + + I + L + DI+ Q+ L FV Sbjct: 1285 VLANFLLEGQKVLRLLRDVYARWQRIRRSLLMLDRDVFGESIDDIEDQLDDLHLSDFVYR 1344 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 ++ RYL+A+E R+E+L + D + +++ + R +DE Sbjct: 1345 MAYEDWQQYPRYLEALEIRIERLEHNLDGDLDAVYELDVHMERL--------AGRADDES 1396 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 + + RW++EE R+ FAQ + T +S KR+ + EQ++ Sbjct: 1397 ISDYRWLVEEFRIQLFAQPMKTRQSVSQKRLNKMWEQVNA 1436 >UniRef50_C8QXF3 ATP-dependent helicase HrpA n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXF3_9DELT Length = 1312 Score = 1297 bits (3358), Expect = 0.0, Method: Composition-based stats. Identities = 499/1300 (38%), Positives = 754/1300 (58%), Gaps = 69/1300 (5%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 PE++ P LP++ +++I+ AI H VVI+AGE GSGKTTQ+PK+C+ GRG + I Sbjct: 13 NTTPELSCPAELPIADFREEIIAAIISHPVVIIAGEPGSGKTTQIPKMCLAAGRGRQQKI 72 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AA ++A R+ +EL +GY++RFSDH S T VK MTDGILLAE Q D Sbjct: 73 GCTQPRRIAAISMAARLRDELGPAGEVLVGYRIRFSDHTSRATRVKFMTDGILLAETQHD 132 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 R L YDTII+DEAHERSLNIDFLLG LKELL RRPDLK+IITSATID E+FSRHF+ AP Sbjct: 133 RQLADYDTIIVDEAHERSLNIDFLLGILKELLKRRPDLKVIITSATIDTEKFSRHFDKAP 192 Query: 246 IIEVSGRTYPVEVRYRPIVE---EADDTERDQLQAIFDAVDE-LSQESHGDILIFMSGER 301 +I+V+GRT+PVEVR++P E EAD E+ + AV E ++ E GDIL+FM ER Sbjct: 193 VIQVAGRTHPVEVRHQPPAETGGEADADEQGYTERAAAAVLEIINHEPPGDILVFMPTER 252 Query: 302 EIRDTADALNKLNLRHTE--------ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 +IR+TA+ L I+PLY RLS EQ R+FQ GR+IV+ATNVAET Sbjct: 253 DIRETAELLEGALGAPAAAGRGGKNTIMPLYGRLSPKEQRRIFQPVKGRKIVIATNVAET 312 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 S+TVPGI+YV+D G AR++ Y+ R + +LP+ P+++++ +QR GRCGRV+ G+CIRLY Sbjct: 313 SITVPGIRYVVDTGLARVAAYNPRARTYKLPVVPVARSACDQRAGRCGRVAPGVCIRLYG 372 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 EDD+L+RP +T PEI+R+NLA VIL+MTAL LGD AAFPFV+ P R I+DG +LL ELG Sbjct: 373 EDDYLNRPLYTPPEIVRSNLAEVILRMTALKLGDPAAFPFVDPPSARAIKDGYQLLAELG 432 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ +L+ GR +S+LP+DP ++RM+LEA+ +RE +I +ALSIQDPR R Sbjct: 433 AL-EGPSGGRLQLSRRGRLMSRLPLDPCISRMILEARDQNALREVCVIAAALSIQDPRIR 491 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA-FRRLCRTDYLNYLRVR 592 P DK++ +D+ HRRF +SDFL ++ LW+ + + S A R+ C++ +L++ R+R Sbjct: 492 PADKEKEADQVHRRFSVPDSDFLFYLKLWDTMQNVLEQTGSKARLRKFCQSHFLSFQRIR 551 Query: 593 EWQDIYTQLRQVVK-ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 EWQDIY Q+ +++ E G +N E A +H ALL+G L +I K +K Y G Sbjct: 552 EWQDIYGQIGRILAGEKGFSLNHEAAAADAVHKALLSGNLRNIAQK-KEKNIYQGGGGRE 610 Query: 652 FSIFPGSGLFKK--------------------------PPKWVMVAELVETSRLWGRIAA 685 IFPGS L+ + P W+M AELVETSRL+ R A Sbjct: 611 VVIFPGSSLYYRGGEGQAKGAKRQGRGAKEGGRPETGPTPGWLMAAELVETSRLYARTVA 670 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 IDP+W+EP+A+ L++ +YS+PHWE+ +G V+A EK T++GL +VA RKV +++IDPA Sbjct: 671 AIDPDWIEPLARPLMRYSYSDPHWEKRRGQVVAKEKGTLFGLVVVAGRKVPFARIDPAEA 730 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 R +FI+ ALVEG+ + + F N +L A++++LE +SRRRD+LV D+ +F+FY+QR+ Sbjct: 731 RRIFIQSALVEGELKGNYHFLGHNRQLLADLKDLEERSRRRDLLVADDRIFQFYEQRLPP 790 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 +V + KK +T L ++ L+ + +P G + L+LSY F Sbjct: 791 EVCDQASLNRLLKKRRGDT--FLQLQREDLLYREPKADLMEQFPTAMQVGQISLQLSYHF 848 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 EPGA+ DG++V IP+ L + FEW +PG+ E + L+K+LPK +RR VP P A Sbjct: 849 EPGAEDDGLSVLIPVQLAAHLRPERFEWLVPGMLEEKIFFLLKNLPKNLRRQLVPIPRTA 908 Query: 926 EAFLGRVK----PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNK 981 ++ + + L +L +E+ G+ ++ W +PDHL+ F +V+ ++K Sbjct: 909 AELAEKLHEKLQSVNISLYQALGQEIYHRYGLRIEAAAWPIKALPDHLRCRFCLVNQEDK 968 Query: 982 KLKEGRSLQDL--KDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK 1039 L GR+L L + + A ++ + ++P+ + ++ Sbjct: 969 ILASGRNLSALASGGPPAAPPPDKVVAALRQRWQRQNISGAELPEIPQRLPMTGPDGQLI 1028 Query: 1040 AW--PALV-DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLG 1096 + P L D+R V + LF A GL RL + +K L + L + Sbjct: 1029 GYLFPGLQEDDRGRVNLHLFTAEKPAHLATCQGLLRLFCREFTARLKGLRKDLTFPRQHW 1088 Query: 1097 LYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE-LNDTVVDIAKQ 1155 + + EL + ++ G + F A EK+R + + + Sbjct: 1089 RLAHGVASLEELNRAIEQFVLREIFATGSGELIGAAEFQARVEKLRRDGFYQEARRLYEL 1148 Query: 1156 VEQILTAVFNINKRLKGRVDMTM---------------ALGLSDIKAQMGGLVYRGFVTG 1200 + +L + + + V A +++++ ++ L+ F+ Sbjct: 1149 ILLVLQERWETLQAINRLVPPAAGGQSRVGSAAAAGLPAELIAELQQELAELLPPDFLEH 1208 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 + L RYL+A++ R ++ DP +D A+ ++ +Q Q++ + + + Sbjct: 1209 HDAASLARLPRYLKALQIRTQRALSDPAKDAAKAARLAAFKQRLQKYPDASELSAGKRSV 1268 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 + E R M+ E ++S FAQ++ T +P+S +R+ + ++ G Sbjct: 1269 LAEYRLMLAEYKISLFAQEIKTIFPVSPQRLEEKWREVEG 1308 >UniRef50_Q7USX6 ATP-dependent helicase hrpA n=1 Tax=Rhodopirellula baltica RepID=Q7USX6_RHOBA Length = 1384 Score = 1283 bits (3321), Expect = 0.0, Method: Composition-based stats. Identities = 511/1330 (38%), Positives = 735/1330 (55%), Gaps = 112/1330 (8%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 +I YP +LP++ + I++ + ++QV++V GETGSGK+TQLPK+ ++ G G G+IGHTQ Sbjct: 64 KIEYPSDLPITAHRDAIVDLLAENQVLVVCGETGSGKSTQLPKMLLDAGLGEHGMIGHTQ 123 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAAR++A R+AEE +T+ GG IGY+VRF D SD T +KLMTDGILLAE + DR L Sbjct: 124 PRRLAARSIATRLAEETETKLGGAIGYQVRFGDQTSDRTKIKLMTDGILLAETRIDRELR 183 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------ 243 Y IIIDEAHERSLNIDFL+GYL++L+ RRP+LK+IITSATID ERF+ HF Sbjct: 184 NYSAIIIDEAHERSLNIDFLMGYLRQLIDRRPELKVIITSATIDAERFAEHFGTYSEEAA 243 Query: 244 -----------APIIEVSGRTYPVEVRYRPIVE------EADDTERDQLQAIFDAVDELS 286 API++V GR YPVE+RY P + E D D + + +D LS Sbjct: 244 SDPENESNVIPAPILQVEGRGYPVELRYFPWEDIAGEDAEIDGRHYDLSRHVIGGLDSLS 303 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLRH-----TEILPLYARLSNSEQNRVFQSHS- 340 ++ GD L+F+ ER+IR+ + + R E+LPLYARL S+Q +F Sbjct: 304 RDGSGDTLVFLPTERDIREVSHHVAGHYKRMGLTNRVELLPLYARLPQSQQQAIFHPSGN 363 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 RRI+ ATNVAE+SLTVPGI+YVID GTARISRYS RTKVQRLP+E IS+ASANQR GRC Sbjct: 364 KRRIIFATNVAESSLTVPGIRYVIDSGTARISRYSARTKVQRLPVEAISRASANQRSGRC 423 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GRV GIC+RLYS +DF +R FT PEI RTNLASV+LQ L LG + FP ++ P Sbjct: 424 GRVGPGICVRLYSAEDFETRDAFTTPEIRRTNLASVVLQSKTLRLGRLEEFPLIDPPRAE 483 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 I++G+R L ELGAI D++ LT +G QL +LPVDPR+ R+++ A++ G + E + Sbjct: 484 AIREGMRTLHELGAIDEDKE-----LTEIGWQLGRLPVDPRVGRILIAAKEMGVLPEVLP 538 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 I +A+ DPR+RP +K+ A+DE H F D ESDFL+ + LW + + S R+ Sbjct: 539 IAAAMENPDPRDRPPEKRAAADEAHAAFKDPESDFLSLLRLWRFYDTMRSDHSRGKLTRI 598 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELG----------------------IPVNSEPAE 618 R ++L+ R+REW D+Y QL+++ +G ++ A+ Sbjct: 599 LRKNFLSPTRMREWSDVYRQLKEMSASIGENKRRSKNKSLTSRGSVGKIRYAELDPAKAD 658 Query: 619 ----------YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWV 668 Y IH AL+TGLLS I M DK EYTGA + ++PGSG+F+ PKW+ Sbjct: 659 QEQPVVDSDKYALIHQALMTGLLSGIAM-AGDKNEYTGAGGLKLFLWPGSGIFEAKPKWI 717 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLP 728 + AELVET++ + R ARI P W+E VA HL+K +YS+PHW R G ++ +++GLP Sbjct: 718 VAAELVETAKQYARTCARIQPGWIEAVAPHLLKASYSDPHWSRKSGGAFCYQRQSLFGLP 777 Query: 729 IVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 +V R+V + IDPA R+L IRH LVE + T F R N +L +E+L K+RRRD+ Sbjct: 778 VVVRRRVPLAPIDPATSRDLLIRHGLVENELPTTAKFVRHNRRLIESIEKLAAKTRRRDL 837 Query: 789 LVDDETLFEFYDQRISHDVISARHFDS---------WWKKVSRE--------TPDLLN-- 829 +VDD +L FY R+ DV + W K++ + P + Sbjct: 838 VVDDYSLLSFYASRLPEDVCDRPRLEKFDRQNPAPAWASKLNDDVALAAWLADPPATDSD 897 Query: 830 ---------FEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 ++ + I+ YP+ + G+ +L L Y F PGA+ DGV + I Sbjct: 898 DEHSETTPYLRPQDILSVDSVAIAADAYPDEFAAGSSRLPLQYHFRPGAEDDGVHLTIHE 957 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP--LELP 938 L QV + W +PGL VIA+IKSLPK +RRN VPA + A + + ++P Sbjct: 958 AALPQVSDDALGWLVPGLLEPKVIAMIKSLPKRLRRNLVPAADVAARVVAEISDKRGQVP 1017 Query: 939 LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKG 998 + +L L R V V D+ +++ HL+ VVDD +++ R + +K L Sbjct: 1018 FMPTLCEALTRHAEVRVVESDFQDEKLEPHLQFLVNVVDDTGNVIEKTRGVDAVKAKLGS 1077 Query: 999 KV-----QETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAI 1053 ++ ++ + + + + LP +KRG +V +P LVD+ DSV+ Sbjct: 1078 RIIDDSEVAAAASGPEADWSREKMTSFDLDVLPREVVRKRGGVQVAQYPGLVDQGDSVST 1137 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK---VLELID 1110 KLF + + A G+ RL + ++ LP A+ + P + + Sbjct: 1138 KLFSDEATAENATRLGMMRLFAIACRKDLRAQVRHLPALAEAKIKLAPIVSSAVIETALA 1197 Query: 1111 DCIS--CGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINK 1168 D I+ V+ V F + + + DIA + ++ A ++ Sbjct: 1198 DLIARVALVESQPGRKMPVVRKRAEFDERIQMAPQRIGEATQDIAGWLGKLTDAYHSMRC 1257 Query: 1169 RLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPH 1228 + + M +D+ Q+ LV F+ ++ L RYL AI RL+K + Sbjct: 1258 QWEESSSPKMNDVRADVMQQIEWLVADQFIQWTPWQHLQHLPRYLSAIAYRLDKASSAAS 1317 Query: 1229 RDRAQMLKVENVQQAWQQWINKLPPARREDED--VKEIRWMIEELRVSYFAQQLGTPYPI 1286 RD ++ + Q W ++ LP RR+ + E RW+IEELRVS FAQ LGT + Sbjct: 1318 RDAEGRQLIDRLWQRW---LSGLPEDRRDPKSQCTSEFRWLIEELRVSQFAQPLGTAVKV 1374 Query: 1287 SDKRILQAME 1296 S+KR + + Sbjct: 1375 SEKRCEKLLS 1384 >UniRef50_A8L7U0 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. EAN1pec RepID=A8L7U0_FRASN Length = 1441 Score = 1263 bits (3269), Expect = 0.0, Method: Composition-based stats. Identities = 594/1081 (54%), Positives = 761/1081 (70%), Gaps = 53/1081 (4%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLS 328 DTERDQ+ AI DAVDEL E GDIL+F+SGEREIRDTADAL + +L TEI+PLYARLS Sbjct: 360 DTERDQVSAICDAVDELCAEGPGDILVFLSGEREIRDTADALARRDLPMTEIVPLYARLS 419 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 ++EQ+RVF H+GRRIVLATNVAETSLTVPGI+YVIDPG ARISRYS+RTKVQRLPIEP+ Sbjct: 420 SAEQHRVFTPHTGRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSHRTKVQRLPIEPV 479 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 SQASANQR GRCGR S+GICIRLYSE+DF RP FTDPEILRTNLASVILQM ALGLG++ Sbjct: 480 SQASANQRAGRCGRTSDGICIRLYSEEDFAGRPAFTDPEILRTNLASVILQMEALGLGEM 539 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE 508 A FPF++ P+ R + DG+RLL ELGA D + +LTP+GR L+QLPVDPRLARMVL Sbjct: 540 ADFPFLDPPESRQVTDGMRLLTELGAFIEDAEPGK-RLTPIGRSLAQLPVDPRLARMVLA 598 Query: 509 AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 A + GC+ E ++I SAL+IQDPRERP++ + A+DE+H RF D SDFL+ +NLW +L Sbjct: 599 AGELGCLSEVLVIASALAIQDPRERPVEHRAAADERHARFTDPTSDFLSILNLWRHLRTA 658 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLT 628 ++ SSN FRR+CRT++LNYLR+REWQD++ QLR + + LG+ N PA+ R +H ALLT Sbjct: 659 REERSSNQFRRMCRTEFLNYLRIREWQDVHGQLRAIARNLGLEPNDSPADARSVHQALLT 718 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP----------------------- 665 GLLSH+G + +K++Y GAR ARF+IFPGSGL ++ P Sbjct: 719 GLLSHLGRYEPEKKDYLGARGARFAIFPGSGLARRRPARPEAGDAGRGAPAEADAEAGGR 778 Query: 666 ------KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 WV+ AELVETSRLW R AR++PEWVEP+A+HL++ TYSEPHW R Q A +A Sbjct: 779 RGPGIPTWVVAAELVETSRLWARTVARVEPEWVEPLAEHLLRHTYSEPHWSRKQAAALAY 838 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 EKVT+YG+P+V +R V Y +IDP + R+LFIRHALVEGDW TRHAFF N +L A VEEL Sbjct: 839 EKVTLYGIPLVTSRLVQYGRIDPVVSRDLFIRHALVEGDWNTRHAFFHANRELLAGVEEL 898 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 EH++RRRDILVDDETLFEFYDQRI DV+S RHFD+WWK R PDLL+F SML+ + Sbjct: 899 EHRARRRDILVDDETLFEFYDQRIPADVVSGRHFDTWWKATRRAEPDLLDFSASMLVNDR 958 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 A I + DYP+ W ++L L+YQF PG ADGVTV +PLP+L + F WQ+PGLR Sbjct: 959 AGAIRQQDYPDTWVADGVELALTYQFTPGEAADGVTVRVPLPVLGTLRAEPFTWQVPGLR 1018 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL------------------ELPLLD 941 ELV ALI++LPK VRR FVPAPNYA A L R+ P + PL D Sbjct: 1019 EELVTALIRALPKVVRRGFVPAPNYARAVLDRLTPGDRPAPGGPPSEGGGPPADDRPLAD 1078 Query: 942 SLERELRRMTGVTVDREDWHW----DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALK 997 ++ EL RM+G + W + +P HL++TFRVVDD L EG+ L +L+ L+ Sbjct: 1079 AVAGELHRMSGSALPSGVWAPPRLAELLPPHLRMTFRVVDDGGATLAEGKDLAELRARLR 1138 Query: 998 GKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 + + A G+E+SGL W G LP E+ RG + V+A PALVDE SVA+++FD Sbjct: 1139 PRTKAV-VTAAAAGVERSGLRAWDVGTLPAVIERSRGGHVVRAHPALVDEGGSVAVRVFD 1197 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGV 1117 + E +AMW G RRLLLLN+ SP++ + +LPN AKL L NP+ V +L+DDC++ V Sbjct: 1198 DREEADRAMWAGTRRLLLLNVASPVRGIIGRLPNAAKLALSNNPHRDVTDLLDDCVAAAV 1257 Query: 1118 DKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 D L+ GG E GFAAL E VRAEL DT + + E++L A I+ ++ Sbjct: 1258 DTLLRRAGGAARDEAGFAALLETVRAELADTAWSVVRGTERVLAAAHEISLGVRALGSPA 1317 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 + + +D++AQ+ L++RGFVT G +RL D RYL A +RL++L D RDR L+V Sbjct: 1318 LLVTATDLRAQLDTLIHRGFVTETGAERLPDLERYLTAARRRLDRLPADAARDRQLTLRV 1377 Query: 1238 ENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 NV +A+ + I+++ PAR E V+ IRWMIEELRVS FAQ L TPYP+S++R+ +A+++ Sbjct: 1378 RNVVEAFNELIDEVGPARAGSEPVQAIRWMIEELRVSLFAQALRTPYPVSEERVYRAIDR 1437 Query: 1298 I 1298 + Sbjct: 1438 L 1438 Score = 332 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 156/279 (55%), Positives = 204/279 (73%), Gaps = 26/279 (9%) Query: 13 QQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEIT 72 + L LM RD R SR L +++++P A+ + +A +++ A +V R A+ P I Sbjct: 19 RACLPQLMARDAHRLSRHLDRARRMRDPAARDSSIARLAADVETARLRVETRRASVPVIG 78 Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 YP+ LPVSQ++ +IL A+RD+QVV++AGETGSGKTTQLPK+C+ELGRG++G+IGHTQPRR Sbjct: 79 YPEELPVSQRRDEILAALRDNQVVVIAGETGSGKTTQLPKLCLELGRGVRGMIGHTQPRR 138 Query: 133 LAARTVANRIAEELKTEPGGC--------------------------IGYKVRFSDHVSD 166 +AARTVA RIAEEL + +GY++RF+D V Sbjct: 139 IAARTVAERIAEELGSVIPETGRDRAQAGPNGNGSGGGNGSGGGGGLVGYQMRFTDRVGP 198 Query: 167 NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII 226 +T++KLMTDGILL E+ DRLL QYDT+IIDEAHERSLNIDF+LGYL LLPRRPDLK++ Sbjct: 199 STLIKLMTDGILLNELTADRLLRQYDTLIIDEAHERSLNIDFILGYLHGLLPRRPDLKVV 258 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 ITSATIDP RF+RHF++AP+IEVSGRTYPVE RYRP+++ Sbjct: 259 ITSATIDPHRFARHFHDAPVIEVSGRTYPVETRYRPLID 297 >UniRef50_Q1H207 ATP-dependent helicase HrpA n=3 Tax=Methylophilaceae RepID=Q1H207_METFK Length = 1376 Score = 1249 bits (3232), Expect = 0.0, Method: Composition-based stats. Identities = 459/1023 (44%), Positives = 649/1023 (63%), Gaps = 10/1023 (0%) Query: 278 IFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQ 337 I D+V++LS+ GDIL+F+ GEREIR+TAD LNK +LRH EILPL+ARLS +Q +VF+ Sbjct: 359 ILDSVEQLSRLGGGDILVFLPGEREIRETADYLNK-HLRHVEILPLFARLSIEDQQKVFR 417 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 S GRR+VLATNVAETSLTVPGIKYVID G AR++RYS R KV++L +E ISQA+A QR Sbjct: 418 SSGGRRVVLATNVAETSLTVPGIKYVIDTGLARVNRYSARAKVEQLQVEKISQAAARQRA 477 Query: 398 GRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 GRCGRVS GICIRLY E DF RPEFTDPEILR++LA+VIL+M AL LG++ FPF+EAP Sbjct: 478 GRCGRVSNGICIRLYDEADFNHRPEFTDPEILRSSLAAVILRMAALKLGNVQDFPFIEAP 537 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 R I DG +LL+ELGA+ ++ +T GRQL++LP+DPR++RM+LE +K GCVRE Sbjct: 538 SSRYIADGYQLLQELGAVDAEQN-----ITDTGRQLARLPLDPRVSRMILEGKKQGCVRE 592 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQK-ALSSNA 576 +II SAL+IQDPRERPMDK++A+D+ H +F+ + SDFL F+ LW + + K S+ Sbjct: 593 ILIIASALAIQDPRERPMDKREAADQAHAKFNVEHSDFLGFIKLWEWYEDALKTKKSNKD 652 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 C +++L++LR++EW+++Y QLR++ +EL + +N +PA Y ++H ALL GLL +IG Sbjct: 653 LLNKCHSNFLSFLRLKEWRELYQQLREIAEELELKLNEQPASYEQVHRALLAGLLGNIGF 712 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 KD + Y GAR RF I PGS L K PKWVM AEL+ET++L+ R ARI+P+W+EP+A Sbjct: 713 KDGEADNYLGARGIRFHIAPGSTLKKARPKWVMAAELMETTKLYARCVARIEPDWIEPLA 772 Query: 697 QHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVE 756 + L + YS+P W+R V+A E+V++YGL +V R+V+Y I+P RE+FIR AL Sbjct: 773 RGLTQSHYSDPRWDRKAAQVVAWERVSLYGLTVVPRRRVHYGPINPQESREIFIREALAN 832 Query: 757 GDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSW 816 ++ TR FF N KL AE+EELEHK+RR+D+LVD+ TLF FYD I +++ F+ W Sbjct: 833 MEFDTRAPFFAANRKLIAEIEELEHKARRQDVLVDEHTLFAFYDAIIPAGIVNGAGFEKW 892 Query: 817 WKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTV 876 ++ RETP LL + L++ GA ++++ +P +KL L Y+FEPG DGVT Sbjct: 893 RQEAERETPRLLYLTRDHLMRHGAAGVTEVQFPESLELDGVKLPLKYRFEPGHPLDGVTA 952 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE 936 +PL LLNQ+ EW +PG+ RE V ALIK+LPK +RR VP P++ FL + Sbjct: 953 TVPLALLNQLNPVEAEWLVPGMIREKVTALIKALPKTLRRVCVPVPDFVTGFLETATRKD 1012 Query: 937 LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 LL +L +++ TG+ + +W D + HL + FRVVD+KN++L GR LK L Sbjct: 1013 GALLPALASYIQQRTGLKLSASEWQADALDAHLYMNFRVVDEKNRELGSGRDWHALKAQL 1072 Query: 997 KGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 Q T + + GIE++GL W FG LP + R ++ +PAL D DSVAIKLF Sbjct: 1073 GQAAQLTFRSNSP-GIEKAGLKQWDFGDLPPTLSFSRDGRQLTGYPALEDNGDSVAIKLF 1131 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 D L +Q+ G+RRL+ + +K L + LP + L EL +D + Sbjct: 1132 DTELAARQSHRAGVRRLMRFELKEQMKQLEKGLPGFNQYALQLRSIMSPEELREDMLVAI 1191 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 D+ + F AL + R L V + I T + ++L Sbjct: 1192 SDRAFIGEDELPRNSQDFMALKARARTRLPAVVEGAGRLATAIATEYTQLTQKL-NAAPA 1250 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 +++ +++ Q+ L+ + F + + L RY++A+ RLEK RD Sbjct: 1251 SLSRVKKELEGQLARLLPKRFFSATPWDTLQHLPRYIKAMRLRLEKYPGAIERDTRSGQA 1310 Query: 1237 VENVQQAWQQWINKLPPARRE-DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 V+ + + W+ + L A +E V + RW+IEELRVS FAQ+L TP+P+S KR+ +A Sbjct: 1311 VQQIWERWESHVQGLRKANQEVPPAVLDYRWLIEELRVSLFAQELKTPFPVSVKRLDKAW 1370 Query: 1296 EQI 1298 E + Sbjct: 1371 EDM 1373 Score = 356 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 162/263 (61%), Positives = 198/263 (75%), Gaps = 1/263 (0%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLL 63 ++ LQ +L +L DR RRL V ++ + E+A ++ + + L Sbjct: 9 ERQVLKHLQAQLPDCLLLDRFHLKRRLQQVGAMLEQGKPVDKLMTELATKVQTSLQRRQL 68 Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R+ P+ YP LPVS +K +I +AI HQVVIV+GETGSGKTTQLPKIC+ELGRG+ G Sbjct: 69 RQEQLPKPEYPAELPVSARKDEIAQAIAKHQVVIVSGETGSGKTTQLPKICLELGRGVAG 128 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRR+AAR+VA+RIA+ELK+ G +GYKVRF+D +S+ T +KLMTDGILLAE Q Sbjct: 129 LIGHTQPRRIAARSVASRIAQELKSPLGEAVGYKVRFNDRLSETTYIKLMTDGILLAETQ 188 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 DR L YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+I+TSATID ERFSRHFN Sbjct: 189 GDRFLNAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIVTSATIDAERFSRHFNG 248 Query: 244 APIIEVSGRTYPVEVRYRPIVEE 266 AP+IEVSGRTYPVE+RYRP+ Sbjct: 249 APVIEVSGRTYPVEIRYRPLGSR 271 >UniRef50_Q1NTJ0 ATP-dependent helicase HrpA n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NTJ0_9DELT Length = 1307 Score = 1230 bits (3183), Expect = 0.0, Method: Composition-based stats. Identities = 494/1291 (38%), Positives = 739/1291 (57%), Gaps = 66/1291 (5%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +T P LP++ +++I+ I VVI+AGE GSGKTTQ+PK C+ GRG + IG TQP Sbjct: 14 LTVPAELPIAAWQEEIVGQISASPVVIIAGEPGSGKTTQIPKFCLLAGRGRRQKIGCTQP 73 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAA +A R+ EL + +G++VRFSD T VK MTDGILLAE+Q+D L Sbjct: 74 RRLAAVAMAERLGVELGSSGSSLVGHRVRFSDRTDRATRVKFMTDGILLAEVQRDGELRD 133 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTII+DEAHER+LNIDFLLG LK+LL RR DLK+IITSATID +FSRHF++AP+IEVS Sbjct: 134 YDTIIVDEAHERTLNIDFLLGILKDLLARRDDLKVIITSATIDTAKFSRHFSDAPVIEVS 193 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL 310 GR +PVE+RY+P EE + +A + L+ + GDIL+FM ER+IR+TA+ + Sbjct: 194 GRAHPVEIRYQPWDEENGEDPGHVERAAAAVEEILTTSTAGDILVFMPTERDIRETAELI 253 Query: 311 N-----KLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 N + +LPLY RLS +EQ R+F+ +GR++V+ATNVAETS+TVPGI+YV+D Sbjct: 254 NSQPAGRRRGGKAVVLPLYGRLSPAEQARIFRPVAGRKVVVATNVAETSITVPGIRYVVD 313 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARI+ Y+ R + +LP+ P++++S +QR GRCGRV GICIRLY E+D+L+RP +T Sbjct: 314 SGLARIAAYNPRARTHKLPVVPVARSSCDQRAGRCGRVGPGICIRLYREEDYLNRPLYTP 373 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS--- 482 PEI+R+NLA VIL+M AL LG AFPFV+ P R I DG +LL ELGA+ + + Sbjct: 374 PEIVRSNLAEVILRMVALKLGRPDAFPFVDPPSSRAISDGYQLLTELGAVAPEPRRGRQK 433 Query: 483 ---AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 +LTP GR +++LP+DP ++RM++EA+++ + E +I +ALSIQDPR RP DK++ Sbjct: 434 GRPPLQLTPRGRLMARLPLDPCISRMIIEARENNALSEVCVIAAALSIQDPRLRPADKEK 493 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 +DE H RF SDFL +V LW E ++ S R+ C +L++ R+REWQDI+ Sbjct: 494 EADEVHGRFAVPGSDFLFYVRLWETSREVLRQTGSLGRLRKFCAGHFLSFQRLREWQDIH 553 Query: 599 TQLRQVVK-ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 Q+ +++K E G N PAE +H ALL+G L +I MK +KQ Y G + IFPG Sbjct: 554 EQILRILKAERGFSFNRTPAEPAAVHRALLSGNLRNIAMK-KEKQHYQGGGGRQLMIFPG 612 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVM 717 S LF KPP W+M AELVET RL+ R A I+PEWVEP+A L++ +Y PHWE+ +G + Sbjct: 613 SSLFGKPPPWIMAAELVETGRLYARTVAAIEPEWVEPLAGDLMRYSYGNPHWEKRRGQAV 672 Query: 718 ATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVE 777 A E+ T++GLP+V RKV +++D A R LFI+ AL+EG+ + + F R N +L ++ Sbjct: 673 ALERGTIFGLPVVTGRKVPLARVDAAEARRLFIQQALIEGEMRGDYDFLRANRELVQQLA 732 Query: 778 ELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK 837 ELE +SRRRD+LVD+E +F FYD+R+ +V + KK + D L + L+ Sbjct: 733 ELEERSRRRDLLVDEEEIFNFYDRRLPAEVCDQAGLNRLLKKQRGD--DFLRLRREDLLS 790 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 + +P G L+L LSY+FEPGA DG+TV +P+ L + FEW +PG Sbjct: 791 RPPDDDLPEKFPARLPIGELELALSYRFEPGAADDGLTVQVPIRLAGHLRPEPFEWLVPG 850 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYA----EAFLGRVKPLELP---LLDSLERELRRM 950 + E + L+K+LPK +RR VP P A A L R P L ++ RE+ Sbjct: 851 MLEEKIFVLLKNLPKNLRRPLVPIPQTAAELTRALLRRGATTSGPVESLYQAMGREIYDS 910 Query: 951 TGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA-- 1008 G+ + W +P+HL+ F ++ D ++L GR L L+ L +A+ Sbjct: 911 YGLRIAGSAWPLAALPEHLRCRFSLLADDGRELAAGRELAALQSNLPTAGAPPAAAIDAM 970 Query: 1009 DDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAW--PALVDERDSVAIKLFDNPLEQKQAM 1066 E++ + + +LP + + A+ PAL E + + ++L+ E +A Sbjct: 971 RQRYERALANSAALPELPSRLPLSDEHGTLLAYLFPALSIEDEEIWLRLYQRREEAHRAT 1030 Query: 1067 WNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG 1126 L L +K L + + L + G+ EL + ++ + Sbjct: 1031 GQALLLLYRREFSRQLKMLRQDCRPDRQQWLLYEGLGEWAELERRLEEFILREIFALHEP 1090 Query: 1127 PVWTEEGFAALHEKVR--------AELNDTVVDIAKQVEQILTAVFNI-----------N 1167 V + FAA +VR ++L + ++ +Q ++L + + + Sbjct: 1091 RVPSAAAFAASVARVRQAGLYTQGSQLFAQLQEVFRQRRRVLDTLQRLGGGGGPASKKGS 1150 Query: 1168 KRLKG-------------------RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGD 1208 +++KG A +++ + ++ LV F + L Sbjct: 1151 RQVKGLAAGLAAVTGGAVGAGDKAGAAALPAELVANFRQRLAELVEPDFPAHCRAEELSR 1210 Query: 1209 TLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMI 1268 RYL+ + R+E+ P R+ A+ ++ ++ + + + E + E R M+ Sbjct: 1211 LARYLKGLAVRVERAYAVPARESAKAAQLAPFKRRLADYPQA-AASPAQRELLAEYRRML 1269 Query: 1269 EELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + +S FAQ++GT +PIS +R+ + +I Sbjct: 1270 ADYEISLFAQEIGTEFPISPQRLEEKWREIE 1300 >UniRef50_Q6AL39 Related to ATP-dependent helicase HrpA n=1 Tax=Desulfotalea psychrophila RepID=Q6AL39_DESPS Length = 1257 Score = 1208 bits (3127), Expect = 0.0, Method: Composition-based stats. Identities = 456/1263 (36%), Positives = 725/1263 (57%), Gaps = 72/1263 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K +I+ AI+++QV+++AG+TGSGKTT+LP+ C+E+ + K L+G TQPRRLAA Sbjct: 20 LPIDKHKDEIITAIKENQVIVIAGDTGSGKTTRLPQYCLEVAQEGK-LVGCTQPRRLAAV 78 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+ EE+ +GYK+RF D+ + T +K MTDG+LLAE + DR L +Y +I+ Sbjct: 79 SVAARVGEEVGRS--EEVGYKIRFHDYTTAKTKIKFMTDGVLLAETKSDRDLRKYSILIV 136 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+LNIDFLLGYLK LLPRRPDLK+IITSATID F++HFNNAP+I + GRT+P+ Sbjct: 137 DEAHERNLNIDFLLGYLKRLLPRRPDLKLIITSATIDTASFAKHFNNAPLISIEGRTFPI 196 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALNKLNL 315 ++RY PI +E + D L+ V +L +E D LIF+ E++IR+ + L K ++ Sbjct: 197 DLRYAPIADE----DEDYLEHCTGVVSQLFLRERPADTLIFLPTEKDIRNCCEMLAK-HI 251 Query: 316 RHTEILPLYARLSNSEQNRVFQSHSG---RRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 + EILPL+ RL S+Q R+FQ +IV+ATNVAETS+TVPGI+YVID G AR++ Sbjct: 252 PNVEILPLFGRLQGSDQRRIFQPCPQGKIAKIVVATNVAETSITVPGIRYVIDSGLARMT 311 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 YS R+K LPI+ IS+AS +QRKGRCGRVS G CIRL++E+D+L R EFT PEI R+N Sbjct: 312 YYSVRSKTTSLPIQKISRASCDQRKGRCGRVSSGTCIRLFAEEDYLGRDEFTLPEIKRSN 371 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LA V+LQM++L LGD FPFV+ P I+DG LL+ELGAI Y+LT G+ Sbjct: 372 LAEVLLQMSSLKLGDPNKFPFVDPPATSTIRDGYALLQELGAI------KGYELTLRGKI 425 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 ++ LP+DP ++R+++EA + C+RE MII +ALS+QDPR RP +K++ +D+ H+RF K Sbjct: 426 MADLPIDPCISRILIEASSNSCLRETMIIAAALSVQDPRIRPAEKEKEADQVHQRFAHKH 485 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG-IP 611 SDF+A +N+WN E+++ S + ++ C++++L++ R+REW D++ QL ++VK Sbjct: 486 SDFMALLNIWNSFHEEEEKKSWSRLKKFCKSNFLSFQRMREWLDLHEQLCRIVKRYKEFS 545 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVA 671 N Y +IH ++L G L +I +K +K+ Y GA N +FPGS LF+ +W+M A Sbjct: 546 FNENDGSYEQIHRSILAGFLRNIALK-KEKKIYMGAGNRELMVFPGSHLFQSAGQWIMAA 604 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVA 731 ++T+RL+ A I+ +W+EP+A+ L + +++ P WE+ G V+A EKVT++GL ++A Sbjct: 605 GFLDTNRLYALTVATIEVDWIEPLAKSLCRYSWANPRWEKKTGQVIADEKVTLFGLVLLA 664 Query: 732 ARKVNYSQID---PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 +R+VN+ + D A R +FI AL+ GD ++ F + NL L ++ +E E + R+RDI Sbjct: 665 SRRVNFGKRDKKNRAEARRIFIESALLSGDLWGKYPFLKNNLTLVSQWQETEERLRKRDI 724 Query: 789 LVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDY 848 + D L +FY R+ DV + + K+ E L + +++ E D+ Sbjct: 725 VYSDTALHQFYQDRLGEDVYDRTSLEKFLKQT--EDKKALFMTEQDILRRTPETSEYADF 782 Query: 849 PNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIK 908 P G+L L+LSY F+P + DG+TVHIP+ L + + F+W +PG +E + L+K Sbjct: 783 PTTIQIGSLSLKLSYTFDPRGNRDGLTVHIPVDLADTISPGRFDWLVPGFLKEKITFLLK 842 Query: 909 SLPKPVRRNFVPAPNYAEAFLGRV----KPLELPLLDSLERELRRMTGVTVDREDWHWDQ 964 LPK +R+ VP + + + + + +L LE + ++ + R DW + Sbjct: 843 GLPKSLRKKLVPINSSVDRIMDDISTKAQSPSGNMLSCLESSILKLYRFNLQRSDW-PQE 901 Query: 965 VPDHLKITFRVVDDKNKKLKEGRSLQDL-----------KDALKGKVQETLSAVADDGIE 1013 +P HL F + D K++ G +L+ + ++ K + G E Sbjct: 902 LPHHLTPYFVLEADSGKEVCSGNNLKQMLTGTPNKGAISQEQFSLKKDAQIIVDKWKGWE 961 Query: 1014 QSGLHIWSFGQLPESYEQ--KRGNYKVKAWPAL--VDERDSVAIKLFDNPLEQKQAMWNG 1069 W+F QLP S K+G+ + L +++R V + N E Q G Sbjct: 962 GD---SWAFDQLPASIPLYNKQGSISGFLFTVLDPIEQRSKVQVNFTRNKQEALQRNQKG 1018 Query: 1070 LRRLLLLNIPSPIKYLHE---KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG 1126 L L L +K L + + Y E D + + + D + Sbjct: 1019 LSYLYQLQFKGQLKPLRKSCSSALSAPSSLWLVKNYSDRKEASDHLLQFILQGIFDLSEA 1078 Query: 1127 PVWTEEGFAALHEKV-------RAEL----NDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 + +E FA + +V R L + + ++ ++L VF + ++ + Sbjct: 1079 TLPGKESFAKVIGEVQKMGLLQRGNLICQDIAEIFRLRRETAELLEKVF-LTRKNANKEK 1137 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 T +L + +I + + F+ L R ++++ RLE+ + +P +D + Sbjct: 1138 ETFSLLIEEI-------LPKTFLQEKEID-LNSCRRQFRSLQVRLERFSANPVKDGQKNA 1189 Query: 1236 KVENVQQAWQQWINKLPPARREDEDVKE-IRWMIEELRVSYFAQQLGTPYPISDKRILQA 1294 + + + E + + + M++E R+S F+ ++ T P+SDK++LQ Sbjct: 1190 LLAPHLKNIEVAEKTREKLSDEACQLLDQYKKMVQEFRISVFSPEIKTQMPVSDKKLLQH 1249 Query: 1295 MEQ 1297 ++ Sbjct: 1250 WQK 1252 >UniRef50_D1N0X8 ATP-dependent helicase HrpA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0X8_9BACT Length = 1235 Score = 1197 bits (3097), Expect = 0.0, Method: Composition-based stats. Identities = 464/1250 (37%), Positives = 689/1250 (55%), Gaps = 47/1250 (3%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 R + +P+ LP+S+ +I +A V+IV G+TGSGKTTQLPKI + LG G +G I Sbjct: 14 CDRFRVEFPEELPISRHVDEIKKAWESSPVIIVGGDTGSGKTTQLPKIALALGYGRRGRI 73 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AA ++ R+A+EL EPG +GY+VRF D + +T++K MTDGILLAE + D Sbjct: 74 GCTQPRRIAASAMSRRVAQELGCEPGTGVGYQVRFDDRTTKSTVLKFMTDGILLAETRND 133 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 R L QY+ +IIDEAHERSLNIDFLLGYLK LLP RPDLK+ I+SAT+D + FSR FN+AP Sbjct: 134 RSLRQYEVLIIDEAHERSLNIDFLLGYLKNLLPHRPDLKVAISSATLDTQEFSRFFNDAP 193 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRD 305 +I + GRTYPVE + P E D+ Q+ + V L + GDIL+F+ GEREIRD Sbjct: 194 VIAIEGRTYPVEDVFMPP--EYDEELSAQIARAAEFVTSL--DPQGDILVFLPGEREIRD 249 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 D L LR+TE+LPL+ RLS ++Q +VF RRIVLATNVAETS+T+P I++VID Sbjct: 250 ATDVLTGRRLRNTEVLPLFGRLSAADQQKVFNPGGQRRIVLATNVAETSVTIPRIRFVID 309 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARI R++ RT+++ L +E ISQASA QR+GRCGR+++G+C+ LYSE+D +TD Sbjct: 310 SGLARIKRFNPRTQIEELQVESISQASARQRRGRCGRIADGVCVHLYSEEDLERSAPYTD 369 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI RT LA VILQM ALGL I FPF+ P +++G+R LE+L A+ A + Sbjct: 370 PEIKRTGLAGVILQMAALGLPRITHFPFINPPPPAAVREGLRTLEDLRALDP-----AGR 424 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT G +L++LP+DP L +M+ A+K + E ++I + LSIQDP+ERP++KQQA+DE H Sbjct: 425 LTREGWKLAELPIDPHLGKMLAFAEKRRVLPELLVIAAYLSIQDPQERPLEKQQAADEAH 484 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 RR+ DK+SDF+ +NLWN + QQ+ S+ R R ++ N+ R+ EW+++ L Sbjct: 485 RRYRDKKSDFVTILNLWNAI--QQECPSNRQLRVFARRNFYNFNRLLEWRNLAADLADAA 542 Query: 606 -----KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 +P E Y ++H ++L G+ HI ++Q Y G +F IFPGSGL Sbjct: 543 ADLKWSGAKLPKLLENPPYDQVHQSILAGIPRHIARYMPEEQHYLGTGARKFLIFPGSGL 602 Query: 661 FKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 FK P+W+M LVETSRL+ R A I P+++E A HL R Y +P+W+ G V A Sbjct: 603 FKAKPAPEWLMSFALVETSRLFARQNAAIRPDYLEQAAPHLCTRIYDQPYWDAESGFVYA 662 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 E++T GL I R+V YS+ PA RE+FIR AL G + ++ + + Sbjct: 663 RERLTFGGLLIHNGRRVLYSKSHPAEAREIFIREALATGSVIIPKTWIEKSAHVLESLAL 722 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE K RR ++D E + E Y + + S + K++ R + ++E Sbjct: 723 LEEKVRRPGTILDPEAVVEHYLTLLPEGIDSVKSL----KELIRNDSQDYSITPQDAMQE 778 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 + + DYP+ RL Y F PG DG+T+++P LN + +W +PG Sbjct: 779 QFRQWEEGDYPDALAFSGQSFRLRYSFTPGEPEDGLTLYVPSDQLNLLPGHALDWLVPGY 838 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL----ELPLLDSLERELRRMTGVT 954 E V +I++LPKPVR+ P AF VK E PL +L LR G Sbjct: 839 LPEKVELMIRALPKPVRQAAGPIAETVAAFCEAVKSGAVFSEQPLAAALAEYLRDNLGEP 898 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 V D+ ++P++L + ++ K ++ R ++ +++ + + + Sbjct: 899 VAPADFDNVRLPEYLTMKLAELNRNGKIVQLHR---EIPASVQQGSRLSRAVAGAKNYTA 955 Query: 1015 SGLHIWS-FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRL 1073 +G W LP E GN K A+PAL DE +S+ L+ E + G+ RL Sbjct: 956 AGCTAWPGLKPLPFEVELPNGNGK-TAYPALCDEGESIGQALYLKESEARMNHRKGIIRL 1014 Query: 1074 LLLNIPSPIKYLHE--KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTE 1131 L + +K+ + +A+L + N +L+D I+ +++ + Sbjct: 1015 FKLENAAQLKFFKRTIRFSRQAELSWFLNYRDYADDLLDTAIAAA----FESDLWEIRDG 1070 Query: 1132 EGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGG 1191 F E + EL V + KQ+E + + L R+ +D+K + Sbjct: 1071 LAFGIGAEHAKQELGCFVDRMVKQLEGYYANY-QLGRDLAKRIKAQCPESAADMKRHLDF 1129 Query: 1192 LVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL 1251 L F+ + D RYL+ ++ R E+ A P RD ++ + + + + Sbjct: 1130 LFRNRFLKSDFV--FEDYPRYLRGVKIRAERAAGAPGRDETKLDAISDYLDRFHLAAESV 1187 Query: 1252 PPARREDEDVKEIRW-MIEELRVSYFAQQ--LGTPYPISDKRILQAMEQI 1298 P D+ + W + EE R++ FA + LG P K++ +A E++ Sbjct: 1188 PEL--TDKPLLHDFWRLTEECRLAVFAPEVPLGERAP--LKKLDKAWEEL 1233 >UniRef50_B2UQA6 ATP-dependent helicase HrpA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UQA6_AKKM8 Length = 1231 Score = 1193 bits (3088), Expect = 0.0, Method: Composition-based stats. Identities = 490/1249 (39%), Positives = 717/1249 (57%), Gaps = 40/1249 (3%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ITYPD LP+S+++ DIL A+R+HQV++V GETGSGKTTQLPK+ MEL +G +G TQ Sbjct: 2 NITYPD-LPISRRRNDILAAMREHQVIVVVGETGSGKTTQLPKMAMELAGEARGRVGCTQ 60 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAA +V+ R+AEEL + GG +GY+VRF + +T +K MTDGILLAE Q D L Sbjct: 61 PRRLAAASVSRRVAEELNCDLGGLVGYQVRFEEKAGLDTRLKFMTDGILLAETQHDPDLR 120 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 QY T+I+DEAHERSLNIDFLLGYL+ LL RR DL+++I+SAT+D FS F APII+V Sbjct: 121 QYHTLILDEAHERSLNIDFLLGYLRLLLGRRRDLRLVISSATLDAGGFSEFFGGAPIIQV 180 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTAD 308 GRTYPV+ Y P + + + + + AVD L + GD+L+F+ GEREIR+ A+ Sbjct: 181 EGRTYPVDFHYLPPLHD----DEELPAHVARAVDWLDTLDDRGDVLVFLPGEREIREVAE 236 Query: 309 ALNKLNLRHTEILPLYARLSNSEQNRVFQSH-SGRRIVLATNVAETSLTVPGIKYVIDPG 367 L NLR+T ILPL+ARL + Q R+F RRIVLATNVAETSLT+PGI YVID G Sbjct: 237 KLEGRNLRNTRILPLFARLGLANQQRIFHPEQGYRRIVLATNVAETSLTIPGIIYVIDSG 296 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427 AR+SRYS +VQRL IEP+S+ASA QR GRCGRV EG+CIRLYSE D+ RP+FTDPE Sbjct: 297 LARVSRYSPARQVQRLQIEPVSKASARQRAGRCGRVCEGVCIRLYSEKDWEDRPDFTDPE 356 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 I R+ LA +L+M LGL ++ FP + P + + +G R L E+GA+ A +LT Sbjct: 357 IRRSALAGALLRMKDLGLPEMPEFPLPDPPSSKLVTEGYRTLREIGALD-----KARQLT 411 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRR 547 P+GR+L++LP+DPRLARM+LEAQ + E ++I + L I DPRERP D Q +D+ H + Sbjct: 412 PVGRKLARLPIDPRLARMLLEAQHEQALPEMLVIVAGLGIMDPRERPADAAQKADQAHAQ 471 Query: 548 FHDKESDFLAFVNLWNYLGEQQ--KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 + +++SDFL+ + LW + + + N R+ C ++LN+ R+ EW +++ L ++V Sbjct: 472 WKEEDSDFLSLLKLWKAAWQFREGRRWRKNQLRKWCGKNFLNFNRMMEWFNLWEDLSRLV 531 Query: 606 KELGIPVNS-------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 +E S A + IH ++L G+ G+ DAD +EY GA F IFPGS Sbjct: 532 RETLKCRISPLEEETERQASFAMIHRSILAGVPRQFGLWDADNREYRGAGGRSFGIFPGS 591 Query: 659 GLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GLF KK +WVM ELV+T+RLW R A+ ++P WVE VA HL + YS W+R QGAV Sbjct: 592 GLFRRKKRSEWVMGVELVDTTRLWMRRASILEPGWVELVAPHLCESHYSGARWDREQGAV 651 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 A E+V GL I+ R+V+Y +I+PA RE+ IR L+ G ++T+ A R LR EV Sbjct: 652 YAVERVVCGGLRIIDNRRVHYGRINPAHAREIMIREGLLGGGFRTKPACIRHLETLREEV 711 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI 836 ++E K RR D + +E +FEF+++ + D +AR F W + ++ P+ L+ + Sbjct: 712 RQIELKLRRPDQVWCEEGVFEFFNRLVPPDCCTARAFLRWAAGMEKKNPEALHVPPQEAM 771 Query: 837 KEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIP 896 E K +P+ + + YQ +PGA+ DGVT+ + + L + E EW +P Sbjct: 772 YEFWGKDLLDGFPDEITCKGAEYAVYYQNDPGAEDDGVTLGVHIDQLPDIPEWLPEWGVP 831 Query: 897 GLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE--LPLLDSLERELRRMTGVT 954 G + L++SLPK +R P A F LE PL L + TG Sbjct: 832 GHLAQRAECLLRSLPKDLRVFLQPISQKAAYFAELRHGLEPDGPLAGKLAEFVEVETGKF 891 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 + +++P L V DD+ ++L G + +L + L K+ A+D + Sbjct: 892 CAPSFFDMNRLPAELVTKIWVCDDEGEELAMGTDVAELNNRLGKKLSRRFQETAEDIVSV 951 Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 +G+ WS G L + + + ALVDE SV +++F++ L+ ++ G R + Sbjct: 952 TGMKEWSCGDLEYTVDVAGR----PGYVALVDEGASVGVRVFEDELDAAESHREGCLRFM 1007 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGK-VLELIDDCISCGVDKLIDANGGPVWTEEG 1133 L + +L K P K + L + G+ +D + + I T E Sbjct: 1008 RLRQTDQLNHLRRKFPLKLEGKLSLHMLGREPSTNAEDLVDVAAE--IAMGRPLPRTAEQ 1065 Query: 1134 FAALHEKVRAELNDTVVDIAKQVEQILTAVFNIN--KRLKGRVDMTMALGLSDIKAQMGG 1191 FAA +R L D ++A E + + L+ V T +D++ Q+ Sbjct: 1066 FAAAEMNLRQNLFDAAHNVADIWELVAGTEHAVRDFTALQKGVRHTE-RITADLQRQLDW 1124 Query: 1192 LVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDP-HRDRAQMLKVENVQQAWQQWINK 1250 L+ F+ +G +RL D RY+Q I +R+ ++ P R+ ++ E V W Q + + Sbjct: 1125 LLRPRFLWAHGAERLPDLKRYMQGIAERIRRIGQQPLARELERLDLFERVYFPWHQVLKE 1184 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 D + +++EE R++ FA + +S+KR++ + E +S Sbjct: 1185 HAG----DLRWMQYGYLLEEYRLAVFAPAISVKGRVSEKRLVASFEALS 1229 >UniRef50_C2KSU4 HrpA family ATP-dependent helicase n=3 Tax=Mobiluncus RepID=C2KSU4_9ACTO Length = 1292 Score = 1184 bits (3063), Expect = 0.0, Method: Composition-based stats. Identities = 526/1340 (39%), Positives = 750/1340 (55%), Gaps = 163/1340 (12%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++TYP LPV++ + +IL+A+R HQV++++G TGSGKTTQLPK+C+E+GRG G+IGHTQ Sbjct: 4 KLTYPPELPVTEARAEILDAMRHHQVIVISGATGSGKTTQLPKMCLEVGRGTNGIIGHTQ 63 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAARTVA RIA E+ G +GY+VRF +V +T +KLMTDGILL+E+ QD L Sbjct: 64 PRRLAARTVATRIAAEMDETLGQTVGYQVRFRQNVGADTRIKLMTDGILLSEMSQDPQLR 123 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-NAPIIE 248 +YDT+IIDEAHERSLNIDF+LGYL+ L+ RPDL +IITSATID +RF+ F + P+IE Sbjct: 124 RYDTLIIDEAHERSLNIDFILGYLQRLVKIRPDLLVIITSATIDSQRFATAFGVDTPVIE 183 Query: 249 VSGRTYPVEVRYRPIVEEAD-----------------------------DTERDQLQAIF 279 V+GRT+PVE+RYRP+V E D E DQ+ I Sbjct: 184 VAGRTFPVEIRYRPLVTEVSPGHLESCAIEPSLNPEKSLEIKETEVDVVDQEIDQVTGIL 243 Query: 280 DAVDELSQESHGDILIFMSGEREIRDTADALNKLN-------------LRHTEILPLYAR 326 AVDEL + GDIL+F++GE +IRDTA AL E+LPLY+R Sbjct: 244 RAVDELVEAGPGDILVFLAGEADIRDTAAALKGHLGHRFVEPDSKSNVPGAIEVLPLYSR 303 Query: 327 LSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 LS + Q +F HS RRIVLATNVAETSLTVPGI YVIDPG ARISRYS +T+VQRLPIE Sbjct: 304 LSEAAQQSIFAPHSLRRIVLATNVAETSLTVPGIVYVIDPGVARISRYSNKTRVQRLPIE 363 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446 PISQASANQR GRCGR GICIRLYS+ DFLSRPE+T+PEI RT+L++VILQM +LGLG Sbjct: 364 PISQASANQRAGRCGRTCPGICIRLYSQQDFLSRPEYTEPEIQRTSLSAVILQMASLGLG 423 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 ++A FPF++ P R++ DGV L +LGA+ D + ++T LGR++++LP+DPRLAR++ Sbjct: 424 EVADFPFLDPPSPRSVTDGVLELSQLGAL--DTRKKPVRITRLGRKIARLPLDPRLARIL 481 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 L A + G EA+I+ +AL++QD RERP +K+ +DE H RF D+ SDFLA++ LW+YL Sbjct: 482 LAADELGVASEAVIVVAALAMQDVRERPSEKRSEADEMHARFEDERSDFLAYLRLWSYLQ 541 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI------PVNSEPAEYR 620 Q+ +LS +AFRR C ++L+YLRVREW D+ QLR++++E+GI +N + + Sbjct: 542 RQKGSLSGSAFRRRCSREFLHYLRVREWFDLAKQLREMLQEIGINTRSLNEINVDVVDAN 601 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 +H ALL G+L+ IG + K+EY GAR +F ++PGSGL K WVM AELVETSRL+ Sbjct: 602 ALHQALLYGMLAQIGYWSSQKREYLGARGQKFVVWPGSGLTSKHYDWVMAAELVETSRLF 661 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R AR++PEW+E ++L+ R+Y EP+W A M E+VT+YGL +VA R + + Sbjct: 662 ARTVARVEPEWIEQAGKYLLVRSYFEPYWSLRAQAAMIHERVTLYGLTLVADRAHTLASL 721 Query: 741 ---------DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVD 791 L R LFIRHALV G+W+ AF + N + +E + + + D Sbjct: 722 GSTLVENQPARDLARALFIRHALVAGEWRENPAFIQTNRERLVAAQEARVRLQIPGEI-D 780 Query: 792 DETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNF 851 D TL ++D+++ +V SA F++WWK E P L+F +L+ +P+F Sbjct: 781 DFTLESWFDKKLPENVTSAAAFNAWWKTKRFEDPQYLDFPWELLV---PASEDAQQFPDF 837 Query: 852 WHQGNLKLRLSYQF---------EPGAD--------------------------ADGVTV 876 W+Q L L+Y F P AD ++GVT+ Sbjct: 838 WNQNETLLPLAYTFGGKRGGITTAPTADIHRNTTQSKRHKSSRIPQREIDVVDLSEGVTI 897 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK--- 933 IP L ++ +GF+W IPG RE ++A IK+LPK VR+ VPA E + Sbjct: 898 IIPERSLETIDPTGFDWPIPGALREHLLARIKALPKQVRKKVVPAAALVEEIWEPISAYL 957 Query: 934 ---PLELPLLDS-LERELRRMTGVTVDREDWHW--DQVPDHLKITFRVVDDKNKKLKEGR 987 P E P LD + + V + R D + +P++ + F ++ K + L +G Sbjct: 958 GVNPSERPSLDQVFSQAIATARRVELSRGDLSAMHEALPENQRNHFAIITAKGRVLAKGD 1017 Query: 988 SLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDE 1047 L++ L + + Q +W + ++ +K +Y AL Sbjct: 1018 DFSVLRNTL----------IVNTTTHQG--KVWHQQEAEKAKVEKPRDYAAALTEAL--- 1062 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 + P + W G L +PY Sbjct: 1063 ---------ELPQTRVITRWRG----------------------AEAAALAASPYPSTAA 1091 Query: 1108 LIDDCISC---GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 L+ S + + A G + E+ L + DTV I + V + Sbjct: 1092 LVQAAQSAAGVALTQEWLATGHQLEGEDDLVQLQAECANRFEDTVYRILQGVAATMHQRV 1151 Query: 1165 NINKRL---KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLE 1221 + + + + + T+ + +I + L+ F+ +K L +YLQA RLE Sbjct: 1152 ELQRVIENARAKASPTLHHTIQEIVNHVNQLLEGDFLARTPYKWLQRLEKYLQADTLRLE 1211 Query: 1222 KLAVDPHRDRAQMLKVENVQQAWQQWINKL---PPARREDEDVKEIRWMIEELRVSYFAQ 1278 K + D ++ V + ++ + + P ++EI W++EE R+S FAQ Sbjct: 1212 KARHNSAADAELSQRLAEVTRDFETSVATIKARPFHADTHRKIQEIYWLLEEFRLSLFAQ 1271 Query: 1279 QLGTPYPISDKRILQAMEQI 1298 QLGT +S KR+ + + +I Sbjct: 1272 QLGTIEKVSAKRLRKLLAEI 1291 >UniRef50_Q12AX3 ATP-dependent helicase HrpA n=1 Tax=Polaromonas sp. JS666 RepID=Q12AX3_POLSJ Length = 1402 Score = 1181 bits (3055), Expect = 0.0, Method: Composition-based stats. Identities = 463/1155 (40%), Positives = 669/1155 (57%), Gaps = 110/1155 (9%) Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGE 300 AP+I VSGR +PVE RYRP E D D AI D VDEL Q H GDIL+F+ GE Sbjct: 261 PAPVIMVSGRMFPVEQRYRPFEESRDY---DLNDAIADGVDELWQNPHSAGDILVFLPGE 317 Query: 301 REIRDTADALNKLNL-----RHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 REIR+ AD L K R+ E+LPL+ARLS +EQ+R+F H+GRRIVLATNVAETSL Sbjct: 318 REIREAADHLRKHLAHQPLTRNAEVLPLFARLSQAEQDRIFDGHTGRRIVLATNVAETSL 377 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI+YVID GTAR+ RYS+R+KV++L +EP+SQA+ANQR GRCGRV++GICIRLY E Sbjct: 378 TVPGIRYVIDAGTARVKRYSFRSKVEQLMVEPVSQAAANQRAGRCGRVADGICIRLYDEQ 437 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DF+ R FTDPEILR++LA+VIL+M AL LG + F F+E P +R I DG +LL ELGA+ Sbjct: 438 DFVGRSRFTDPEILRSSLAAVILRMKALHLGAVEDFAFIEPPQRRAIADGYQLLAELGAV 497 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 D + LTP+GR L++LP+DPR+ RM+LEA+ + E ++I SALS+QD R+RPM Sbjct: 498 DDDNE-----LTPVGRTLAKLPLDPRVGRMILEAKDRQALDEVLVIASALSVQDVRDRPM 552 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQ-------------------------- 569 D+Q +D+ H +F D++S+F ++ LW +LG+ + Sbjct: 553 DRQAQADQAHAKFDDEKSEFSGYLKLWKWLGDSRGGRPSPQPSPKGRGGKTELLPLPLGE 612 Query: 570 --------KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE 621 +S+ + L R +Y+N RVREW+DI++QL VV E G +N PA Y + Sbjct: 613 GRGEGSPVHKISNRQYETLLRENYVNVRRVREWRDIHSQLHSVVGEQGWHLNERPASYEQ 672 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 +H+++L GLL +IG K ++ Y GAR RF PG+ L KKP +W++ AELVET+RL+G Sbjct: 673 LHLSMLCGLLGNIGCKSDEEDWYLGARGIRFYRHPGAKLSKKPGRWIVAAELVETTRLFG 732 Query: 682 RIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQID 741 R A I+P+W+E VA HL+K+ +PHWE+ V A E+ T+YGL + R+VN+ ++D Sbjct: 733 RGIANIEPQWIEQVAGHLLKKQLLDPHWEKKAAQVTALERATLYGLVVYNGRRVNFGRVD 792 Query: 742 PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQ 801 P RE+FIR ALV G+W T+ F NL+L +V++LEHK+RR+D+LVD+E ++ FYDQ Sbjct: 793 PVSAREIFIREALVAGNWDTKLTFLAANLRLVQQVQDLEHKARRQDVLVDEELIYAFYDQ 852 Query: 802 RISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRL 861 ++ DV S +SW+K ++ P LL + L++ A I+ +P G + + Sbjct: 853 QLPADVCSGASCESWYKDEVKKQPKLLLLTREELMRHEAAGITTQAFPKTLRLGGVDCMV 912 Query: 862 SYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPA 921 +Y EPG DGVTV +PL LNQV E EW +PG+ ++ V ALIK+L + R VP Sbjct: 913 TYLHEPGDPKDGVTVDVPLFALNQVNEERCEWLVPGMLKDKVQALIKTLHQRPRSRLVPL 972 Query: 922 PNYAEAFLGRV----KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVD 977 P A G++ L D++ + +R T + + R D D +P HL + FRV+D Sbjct: 973 PETAARMAGQLLQPEVFGSGSLTDAILKLVRDATSLDIKRADMKLDMLPAHLFMNFRVID 1032 Query: 978 DKNKKLKEGRSLQDLKDALKGKVQETLSAVAD---------------------------- 1009 + ++L GR+L LK L + + A+A Sbjct: 1033 EHGRQLGAGRNLGALKGELGPQARGAFQALAGLKNLARPAASAPNEESDRPSAQVPTGQA 1092 Query: 1010 ------DGIEQSG---------LHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIK 1054 G QS WSFG+LPE E ++G+ + +PAL+D D+V I+ Sbjct: 1093 AIKNVAKGSTQSESHPVKVAERYTSWSFGELPELMEIRKGSQTLIGFPALIDLGDAVTIE 1152 Query: 1055 LFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF---------NPYGKV 1105 +FD P GLRRL L I +KYL + LP+ K+ + + G + Sbjct: 1153 VFDEPDLAAVKHRAGLRRLFSLQIKDALKYLEKNLPDLQKMATAYMLVGRAADNSGGGTL 1212 Query: 1106 LELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 EL I +D+ + P E F + R L ++A+ ILT Sbjct: 1213 EELRAQIIEVALDRAFLLDPLPT-GEADFKRRVDDGRGRLTLIASEVARLAAGILTEYAV 1271 Query: 1166 INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV 1225 +++K + A ++D Q+ L+ + F+T + +L +RYL+AI RLEK Sbjct: 1272 AQRKIKDTKN--AAEAVADASQQLQRLMPKRFLTTTPYPQLQHFVRYLKAITLRLEKWRA 1329 Query: 1226 DPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYP 1285 DP RD A++ ++ +Q + + + + D ++E RW++EELRVS+FAQ+L TP P Sbjct: 1330 DPARDAARLAELRPQEQRYWRLVAER--KGATDARMQEFRWLLEELRVSFFAQELRTPQP 1387 Query: 1286 ISDKRILQAMEQISG 1300 +S KR+ +A +Q++G Sbjct: 1388 VSVKRLDKAWQQLNG 1402 Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats. Identities = 125/193 (64%), Positives = 146/193 (75%), Gaps = 9/193 (4%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-------K 122 IT+P++LPVS K+ DI A++ HQV+IV GETGSGKTTQLPKI + +GRG Sbjct: 22 AITFPESLPVSGKRDDITAALQAHQVIIVCGETGSGKTTQLPKIALAMGRGKLNYPAGQG 81 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 LIGHTQPRR+AA +VA RIAEELKT G +GYKVRF D +S + VKLMTDGILLAE Sbjct: 82 KLIGHTQPRRIAASSVAKRIAEELKTPLGEVVGYKVRFQDRLSRDASVKLMTDGILLAET 141 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 Q D LL YDT+IIDEAHERSLNIDFLLGYL++LLPRRPDLK+IITSATID +RF+ +F Sbjct: 142 QTDPLLRAYDTLIIDEAHERSLNIDFLLGYLRQLLPRRPDLKVIITSATIDAQRFADYF- 200 Query: 243 NAPIIEVSGRTYP 255 A GR P Sbjct: 201 -ASSAPAPGRPKP 212 >UniRef50_B1ZWH7 ATP-dependent helicase HrpA n=2 Tax=Opitutaceae RepID=B1ZWH7_OPITP Length = 1566 Score = 1179 bits (3050), Expect = 0.0, Method: Composition-based stats. Identities = 481/1502 (32%), Positives = 724/1502 (48%), Gaps = 280/1502 (18%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 + +P LP+S + ++I AI+ + VVI+AGETGSGKTTQ+PK+C+ GRG G I T Sbjct: 31 FRLEFPPELPISARAEEITAAIQANAVVILAGETGSGKTTQIPKMCLAAGRGTHGRIACT 90 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA +V+ R+AEE+ G +G K+RFSD + +T+VK +TDG+LLAE+Q D LL Sbjct: 91 QPRRVAALSVSRRVAEEMNVTWGREVGCKIRFSDETTRDTVVKFLTDGMLLAEVQGDPLL 150 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 YDTIIIDEAHERSLNIDFLLG+L+ L +RP+LKI+ITSATID E FS+ F++APII+ Sbjct: 151 RDYDTIIIDEAHERSLNIDFLLGHLRTLRYKRPELKIVITSATIDTEAFSKAFDDAPIIQ 210 Query: 249 VSGRTYPVEVRYRPIVEEADDTERD---------------------QLQAIFDAVDELSQ 287 V GR +PVEV Y P+ E D + + + +AV+ + Sbjct: 211 VEGRMFPVEVIYAPLDELGSDYDENDENTEKSDASAVASAKAEALHYIDGTVEAVERIIG 270 Query: 288 ESH-GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 ES GDIL+F+ ER+IR+ + L +L +E++PL+ RLSN+EQ RVF R+I+L Sbjct: 271 ESSSGDILVFLPSERDIREVRELLEGRSLGRSELVPLFGRLSNAEQQRVFAPTQHRKIIL 330 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATN+AETSLT+PGI +V+D G ARISRY+ + + +RLPIEP+SQ+SA+QRKGR GRV+ G Sbjct: 331 ATNIAETSLTIPGIHFVVDTGLARISRYAPQARTRRLPIEPVSQSSADQRKGRSGRVAHG 390 Query: 407 ICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG- 465 +CIRLYSE D+L RP FT PEI R NLA VIL+M A GLGDI FPF+ P ++I+ G Sbjct: 391 VCIRLYSEKDYLERPRFTQPEIQRANLADVILRMKAFGLGDIERFPFINMPATKSIRAGY 450 Query: 466 --VRLLEELGA------------------------------------------------- 474 + L L Sbjct: 451 ALLEELGALDCRAGSPDPAVGAMLLRGAATPPSRPASTAATMRDEGIAPPFPSDPSAPDS 510 Query: 475 ----ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 +++ + LTP+GR+L++LPVDP + RM+L+A+ +RE ++I S LS+QDP Sbjct: 511 QLSTLSSQPSPYSRPLTPVGRELARLPVDPTVGRMILQARTERALREVLVIASGLSVQDP 570 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP+DKQQ +D HRRF +SDFL +N+W+ ++ + LS RR CR +L+Y R Sbjct: 571 RERPLDKQQQADTAHRRFRHPDSDFLTLLNIWDAYHDEFERLSQAKLRRFCREHFLSYTR 630 Query: 591 VREWQDIYTQLR---------------QVVKELGIPVNSEP------------------- 616 +REW+DI+ QL ++ + G+P S Sbjct: 631 MREWRDIHAQLLDVLEERRDFQLTSVAELARGTGVPPVSPKRGSPRHPASASPAGASLAD 690 Query: 617 -------------------------AEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 YR IH ++L GLL ++ D + Y + R Sbjct: 691 ARNRRQTAPRVKSESQADDPLAFGTPAYRAIHRSILAGLLGNVATLDEENGNYKATHDRR 750 Query: 652 FSIFPGSGLF-----------------------KKPPKWVMVAELVETSRLWGRIAARID 688 ++FPGS LF + P+W+M AE++ETSRL+ R AR+D Sbjct: 751 VNLFPGSVLFQRESPRKKPLNAQPSTLNSSAARGRAPRWIMAAEIMETSRLYARTCARLD 810 Query: 689 PEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCREL 748 P W+ +A HL++ T+SEP W G VM ++ +YGL I +R V Y +I+P E+ Sbjct: 811 PAWLLELAGHLVRVTHSEPFWNPDAGRVMVKQRTRLYGLEI-DSRAVGYGRINPTHATEI 869 Query: 749 FIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRI----- 803 FIR ALV + F N ++R +E + ++R L DE FY R+ Sbjct: 870 FIREALVNDTLTRQIDFLEHNRRIRENIEAILTRTRDTGYLNLDEAACRFYASRLIDVGA 929 Query: 804 ---------------------------------SHDVISARH-----------FDSWWKK 819 +V + + + ++ Sbjct: 930 PPANAPSSSAIADGAATPSSRPDAAPDGVATPRPSEVENQKSKIENSISSVGDLLALLRE 989 Query: 820 VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIP 879 P L + L + +P N L L+Y ++PG DGVT+ + Sbjct: 990 RRAMEPRFLFMQPEDLRDPDTLEHDPEAFPETLPLENRALPLNYAYKPGQAEDGVTLELN 1049 Query: 880 LPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG------RVK 933 + + + +W +PG V +++LPK +RR FVP A A + R+ Sbjct: 1050 VREAEALTPAALDWAVPGYLEPKVEHYLRALPKELRRGFVPLAETARALVAQLAERDRLT 1109 Query: 934 PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 L ++L + V +D W PDHL++ RV+DD+ ++L R+L +++ Sbjct: 1110 GRRETLTEALAFLISERFRVAIDSALWADKPPPDHLRVRVRVLDDEERELCASRNLDEIQ 1169 Query: 994 DALKGKVQETLSAVADDG----------IEQSGLHIWSFGQLPESY-EQKRGNYKVKAWP 1042 AL + +E +AVA E+ W+FG++P ++ V A+P Sbjct: 1170 AALHTQKREASAAVAHAEPVAWRQARARWEKPPQTEWTFGEIPARVLVTEQAGVPVFAFP 1229 Query: 1043 ALVDERD---------------SVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHE 1087 AL E VA++LF P E AM +GL LL L + + +L Sbjct: 1230 ALQPETGDKHAVGPALAAGRYRGVALRLFKTPEEAGAAMLHGLSTLLELQLSRDLGWLER 1289 Query: 1088 KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN---------------------GG 1126 L LG + L D + LID Sbjct: 1290 DLRALRPLGPLAATLTPLESLQADAFAMLRRWLIDPERCRAGSPDSAAAKASDERRGAEP 1349 Query: 1127 PVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIK 1186 P + + FAA + +++L + ++ + +ILT ++ + + Sbjct: 1350 PPYNKPAFAAAVARAKSDLQGLIPRLSDLLREILTLRQSL---------LVHPTPYPKLD 1400 Query: 1187 AQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQ 1246 + L+ F + +L RYL+A+ R ++ +P +D + ++ A + Sbjct: 1401 QDLAALLPPDFPRHTPYSQLAHFPRYLKAMTLRADRWRKNPAKDAERAAQLAPYVAALVK 1460 Query: 1247 W-------INKLPPARRED-EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 P + D ++ RW+IEE RVS FAQ+LGT P+S ++ +A+ ++ Sbjct: 1461 LSRARTTPAAATPSSGSADVNRLESFRWLIEEFRVSLFAQELGTAEPVSAVKLDRALAEL 1520 Query: 1299 SG 1300 +G Sbjct: 1521 TG 1522 >UniRef50_C4KC73 ATP-dependent helicase HrpA n=1 Tax=Thauera sp. MZ1T RepID=C4KC73_THASP Length = 1411 Score = 1172 bits (3033), Expect = 0.0, Method: Composition-based stats. Identities = 496/1044 (47%), Positives = 655/1044 (62%), Gaps = 49/1044 (4%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ-----AIFQEMAKEIDQAAGKVLLREAAR 68 D + DR R R + D + + + ++++ + R AA Sbjct: 15 PNFDDCLSGDRPRLRRMARDLSHPSRADERATAQRLRLRADFDALLERSRAALRARRAAL 74 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P +P LPVS ++ +I A+ HQV+IV GETGSGKTTQLPKI M LGRG+ GLIGHT Sbjct: 75 PVPDFPPELPVSGRRDEIATALAAHQVIIVCGETGSGKTTQLPKIAMTLGRGVAGLIGHT 134 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRRLAAR A+RIA+ELK+ G +GYK+RF+D + + VKLMTDGILLAE Q D LL Sbjct: 135 QPRRLAARATASRIAQELKSPLGEVVGYKIRFTDKTGERSHVKLMTDGILLAETQTDPLL 194 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 243 YDT+IIDEAHERSLNIDFLLGYLK LLPRRPDLK+++TSAT+D ERF+RHF + Sbjct: 195 AAYDTLIIDEAHERSLNIDFLLGYLKTLLPRRPDLKVVVTSATLDAERFARHFADAAGKP 254 Query: 244 APIIEVSGRTYPVEVRYRPIVEE------------------ADDTERDQLQAIFDAVDEL 285 AP+IEVSGR YP+E+RYRP+ E A D RD + A+ DAVDE Sbjct: 255 APVIEVSGRLYPIEMRYRPVESEEIDPAAAARSAAKGGREAAKDRSRDLMDALVDAVDEA 314 Query: 286 SQESHGDILIFMSGEREIRDTADALNK-LNLRHTEILPLYARLSNSEQNRVFQSHSGRRI 344 + GD+L+F+ GEREIR+ A+AL K +L TEILPL+AR S EQ RVF + +GRR+ Sbjct: 315 QRCGPGDVLVFLPGEREIREAAEALRKAHHLPGTEILPLFARQSAQEQARVFSASNGRRV 374 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VL+TNVAETSLTVPGI+YV+D G ARI RYS R KV++L +E I++++A QR GRCGRV Sbjct: 375 VLSTNVAETSLTVPGIRYVVDTGLARIKRYSPRNKVEQLQVEKIARSAAQQRAGRCGRVM 434 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 +GICIRLY EDDF RP TDPEILR++LA VIL+M AL LG + FPF++AP R I D Sbjct: 435 DGICIRLYDEDDFNRRPAHTDPEILRSSLAGVILRMKALKLGAVEDFPFIDAPGARLIGD 494 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 G LL ELGA++ D++ KLTP G +L++LP+DPR+ RM+L A+ G + E ++I +A Sbjct: 495 GYALLAELGAVSDDDE---RKLTPTGVELAKLPLDPRIGRMILAARDRGALAELLVIAAA 551 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESD----FLAFVNLWNYLGEQQKALSSNAFRRL 580 LS+QDPRERP D A+D+ H RF E D FL + +LW E Q+ SS+ + Sbjct: 552 LSVQDPRERPQDSPGAADQAHARFRGGEQDQKSEFLWYWHLWKAWDEVQRHESSSKQKAW 611 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMK--- 637 C+ +LNY+R+REW+D++ QL + E G N +PA Y IH ALL GLL +IG K Sbjct: 612 CKKHFLNYMRMREWRDVFAQLHTLCAEHGWKENEQPANYEAIHKALLAGLLGNIGCKVED 671 Query: 638 --DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 Y GAR +F PGS L KK KW+M AE VETSRL+GR ARI+PEWVE V Sbjct: 672 ASGPQAGAYLGARGIKFWPHPGSALAKKAGKWIMAAEQVETSRLFGRCIARIEPEWVEEV 731 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 HLIKR EPHW +A GAV A E+ T+YGL I R V Y IDPALCRELFIR LV Sbjct: 732 GGHLIKRQVFEPHWSKASGAVRAWERGTLYGLVIYPRRGVAYRDIDPALCRELFIREGLV 791 Query: 756 EGDWQTRH----AFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISAR 811 +G+ AF N +L AE+E LEHKSRR D+LVD+ + FYD ++ +V Sbjct: 792 QGEIAEGPARAMAFLAHNQRLVAEIERLEHKSRRPDVLVDETLIEAFYDSKLPAEVCDLA 851 Query: 812 HFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADA 871 ++W K + P LL+ + L++ AE ++ +P KL+L+Y +PG Sbjct: 852 GLEAWRKPAEKAEPKLLHLSREQLMRHDAEGVTTDRFPPTLEVLGQKLKLAYLHQPGEAD 911 Query: 872 DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGR 931 DGVT+ +PL +LNQ+ + EW +PGL E V AL+K++P+ R P A AF+ Sbjct: 912 DGVTLAVPLAMLNQIPANRCEWLVPGLLEEKVAALMKTVPQKHRHRLQPVAESAAAFMAV 971 Query: 932 VKPLE----LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGR 987 + E PLL L+R + + + E + + + H + FRV+D+ + + + R Sbjct: 972 FEAGEFDTDEPLLKMLQRFVEERVQLKLPLESFRPENLKPHCFMNFRVIDEHGRLMGQSR 1031 Query: 988 SLQDLKDALKGKVQETLSAVADDG 1011 +L +L+ + +V SA G Sbjct: 1032 NLMELRARFREQVAARFSAAKIGG 1055 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 4/238 (1%) Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 SG W+FG LPE E + +V +PAL D+ DSV+++ D P E + GL RL Sbjct: 1150 SGFTAWTFGALPELLEVRVAGREVIGFPALHDDGDSVSLRPHDTPEEASRVHRRGLARLF 1209 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 LN+ ++ + LP +L L + +G EL I + + P + F Sbjct: 1210 ALNLKDQVRAVER-LPGLRELALQYMGFGTEAELKARLIEATLGRCCLLEPLPT-DADAF 1267 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 A + ++ ++ + + Q+L + KRL G T ++DI+ Q+G L+ Sbjct: 1268 AKRCAEAKSRVSLVAQEFMRLTGQLLVEHAALQKRLSGL--KTFPEVVADIQGQLGALLP 1325 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLP 1252 + F+ + +L RYL+ RL+KL +P RD VE + + P Sbjct: 1326 KDFLVAFEWDKLAHFARYLKGAAVRLDKLRNNPARDAPGHGGVEAARPGLGARAPRPP 1383 >UniRef50_B3DQA9 HrpA-like helicase n=21 Tax=Bifidobacteriaceae RepID=B3DQA9_BIFLD Length = 1378 Score = 1141 bits (2952), Expect = 0.0, Method: Composition-based stats. Identities = 520/1409 (36%), Positives = 742/1409 (52%), Gaps = 214/1409 (15%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHT 128 + YP LPVS + +I A++ QVVIV+G+TGSGKTTQLPKI +ELGRG G I HT Sbjct: 2 KYEYPAELPVSAARDEIASAVKRSQVVIVSGQTGSGKTTQLPKILLELGRGTHGKQIVHT 61 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AARTVA RIA E+ + G +GY+VRF+D S +T ++++TDGILLA+IQ+D L Sbjct: 62 QPRRIAARTVAERIASEMGVKLGDEVGYQVRFTDESSPSTRLRVVTDGILLAQIQRDPKL 121 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA---- 244 +YDTIIIDEAHERSLNIDFLLGYL LLP+R DLK+IITSATID +F HF +A Sbjct: 122 TRYDTIIIDEAHERSLNIDFLLGYLTALLPQRRDLKLIITSATIDSVKFQEHFEHALHEK 181 Query: 245 -PIIEVSGRTYPVEVRYRPI---------------------------------------- 263 P+IEVSGRT+PV+V Y P+ Sbjct: 182 VPVIEVSGRTFPVQVVYEPLGTAPALMREVPGFAVGARPGDADYDELASAIAESDSDRPR 241 Query: 264 ----VEEADDTERDQLQAIFDAVDEL-----SQESHGDILIFMSGEREIRDTADALNK-- 312 ADD D A+ A EL + DIL+F SGER+I + AL Sbjct: 242 GRSGASYADDGITDMPTAVARACAELVIHSSHERGPRDILVFASGERDIHEFEAALRHHY 301 Query: 313 -------LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 EI+PL+ARLS ++Q++VF+SH +RIV+ATNVAETSLTVPGI+YV+D Sbjct: 302 GPRADDMRRPDAIEIMPLFARLSAADQHKVFESHLHQRIVIATNVAETSLTVPGIRYVVD 361 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 PG+ARISRYS KVQRLPIEPISQASA+QR GRCGRV++GI IRLYS +D+ +RP FT+ Sbjct: 362 PGSARISRYSKTAKVQRLPIEPISQASADQRSGRCGRVADGIAIRLYSREDYETRPRFTE 421 Query: 426 PEILRTNLASVILQMTALGLG----DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PEILRT+L +V+L M ++G+ D+ F F++ PD + + DG L EL AI + Sbjct: 422 PEILRTSLGAVVLHMLSVGVARTAEDVTNFGFIDPPDMKAVSDGFNELTELKAIG--RKR 479 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHG---CVREAMIITSALSIQDPRERPMDKQ 538 LT GRQL+++P+D RL RMV+EA K G + + +++ + LS+QDPRERP DK+ Sbjct: 480 GEVTLTHTGRQLARIPIDVRLGRMVIEAAKTGSPNLLAQVLVVVAFLSLQDPRERPDDKR 539 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 + +D H R+ D+ SDFL +N+W+ + + S+NA RR+C+T+Y ++LR+R+W+D+ Sbjct: 540 EDADRIHNRYADETSDFLTALNIWDRVFQADGDPSNNALRRICKTEYFSWLRMRQWKDLV 599 Query: 599 TQLRQVVKELG------------------IPVNSEPA-------EYREIHIALLTGLLSH 633 +QLRQ+ KEL +P+N + A + IH ++L GLLS Sbjct: 600 SQLRQMCKELKFKVGDPLPASRPGLEIRQLPLNQQAAHSLCCAWDADGIHKSMLAGLLSM 659 Query: 634 IGMK--------------------------DADKQEYTGARNARFSIFPGSGLFKKPPKW 667 +GM+ K +Y GAR RF++FP S + KK P W Sbjct: 660 MGMQVVREPKASDFAGLTGSARARAMKRAQKQSKNDYQGARGTRFALFPASAVAKKTPSW 719 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 VM ELVETSRLW R +A IDP W EP+A L + TY+EPHW ++G+ +AT +V +YGL Sbjct: 720 VMSTELVETSRLWARYSAAIDPAWAEPLAGQLTRTTYAEPHWSGSRGSAVATARVLLYGL 779 Query: 728 PIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHA---FFRENLKLRAEVEELEHKSR 784 PIV R V + +I+P R+ IR LVEGD Q R + F +N + + + ++R Sbjct: 780 PIVQDRAVQWGRINPLEARDFLIRQGLVEGDIQQRFSYDDFVGKNRDILEDAADDASRTR 839 Query: 785 RRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK-EGAEKI 843 + V DE LF+FY+ I +DV S WWK P+LL+F+ + + + ++ + Sbjct: 840 QLADTVSDEDLFDFYNAVIPNDVTSVSDLAKWWKSEHDRQPNLLDFDPAKVERLASSDSV 899 Query: 844 SKLDYPNFWHQGN-----LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 S DYP+ WH + LRLSY ++P ADGVTVH+PL L+++ F W +PGL Sbjct: 900 SLDDYPDHWHTTGSDGQPIDLRLSYVYDPADPADGVTVHVPLKALSRITPDQFTWNVPGL 959 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPL------------------- 939 EL++++IK+LPK +R FVPAP+ A A + L Sbjct: 960 LDELILSMIKALPKQLRVQFVPAPDAARAIRDWIDEHYPDLPGSGSQQKPNLPPVDEDGT 1019 Query: 940 ---LDSLERELRRMT----GVTVDREDWHWD---QVPDHLKITFRV-------------V 976 L + G + E + ++ +L++TF V Sbjct: 1020 TVGWPDLAHVFTKAAIATKGAQIHPEVLGPELVERLSPYLRVTFSVEQQLPAGKHPRGRR 1079 Query: 977 DDKN--KKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRG 1034 + K L + L+ L+ + + + + +Q+G Sbjct: 1080 HARGPIKVLGVSKDLKALQRKFAAQAEASARQMVKKQADQAG------------------ 1121 Query: 1035 NYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLR-RLLLLNIPSPIKYLHEKLPNKA 1093 ++ V+ + + R L + P + + + Sbjct: 1122 -----------EQGKLVSQANLLHKAGATTESRATMLWRGALDALRLPAERISSRWLGTE 1170 Query: 1094 KLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIA 1153 L L PY +L++D V +L+ N + +E A VR DTV +A Sbjct: 1171 ALMLASAPYKSTKDLVEDLQLATVKRLM-PNVDRLSDDEALANAVLDVREVYEDTVYQVA 1229 Query: 1154 KQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYL 1213 V +L A ++K G+ D+ M L I+ + LVY GF+ L RYL Sbjct: 1230 HDVIAVLKAYAEVDKATGGKADLPMLSVLQSIRDHIATLVYPGFIGRTPPDALKSLSRYL 1289 Query: 1214 QAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL------PPARREDEDVKEIRWM 1267 +A RL K D +RD + + +Q + + + P + ++ RWM Sbjct: 1290 RADLSRLNKAKTDKNRDVKWAWQADEARQVVDKALARAKAEPAGPKHEALMKQAEQARWM 1349 Query: 1268 IEELRVSYFAQQLGTPYPISDKRILQAME 1296 +EE VS +AQ+LGT P S RI +A+ Sbjct: 1350 LEEFYVSLWAQELGTKGPASLNRIKKALA 1378 >UniRef50_D1BTV1 ATP-dependent helicase HrpA n=4 Tax=Bacteria RepID=D1BTV1_XYLCX Length = 1624 Score = 1123 bits (2906), Expect = 0.0, Method: Composition-based stats. Identities = 543/1153 (47%), Positives = 698/1153 (60%), Gaps = 221/1153 (19%) Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P ITYP+ LPVS +++DI AIR++QVV+VAGETGSGKTTQLPKI ++LGRG G IGH Sbjct: 76 VPPITYPEQLPVSARREDIATAIRENQVVVVAGETGSGKTTQLPKILLDLGRGRAGQIGH 135 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AAR+VA RIAEEL+T G +GY+VRF+D S+ T+VK+MTDGILLA+IQ+D Sbjct: 136 TQPRRIAARSVAERIAEELRTTLGEIVGYQVRFTDQSSEQTLVKVMTDGILLAQIQRDPE 195 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN---- 243 L+ YDTI+IDEAHERSLNIDFLLGYL LLPRRPDLK+IITSATID +RF+ HF+ Sbjct: 196 LLAYDTIVIDEAHERSLNIDFLLGYLSRLLPRRPDLKVIITSATIDSQRFAEHFSPSHLA 255 Query: 244 ----------------APIIEVSGRTYPVEVRYRPIVEEADD-------TERDQLQAIFD 280 AP++EVSGRTYPVE+RYRP+V E + ERD + I + Sbjct: 256 ALGGAPEAVVDVLPKAAPVVEVSGRTYPVEIRYRPLVPEVSENGLQKKGEERDLVTGIIE 315 Query: 281 AVDELSQESHGDILIFMSGEREIRDTADALNK---------LNLRHTEILPLYARLSNSE 331 A DEL + GDIL+F+SGEREIRD D L + +H EILPLY+RLS +E Sbjct: 316 ACDELMRCGPGDILVFLSGEREIRDALDGLEGHLGARARDPRHPQHVEILPLYSRLSAAE 375 Query: 332 QNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 Q+RVF +H GRRIVL+TNVAETSLTVPGI YV+D G ARISRYS TKVQRLPIE ISQA Sbjct: 376 QHRVFAAHPGRRIVLSTNVAETSLTVPGIHYVVDTGLARISRYSKATKVQRLPIEAISQA 435 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GD 447 SANQR GR GRV++G+ +RLYS+ DF +RPE+T+PEILRT+LASV+LQM A+G+ + Sbjct: 436 SANQRSGRSGRVADGVAVRLYSQADFEARPEYTEPEILRTSLASVLLQMIAVGVVESPDE 495 Query: 448 IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL--------------------- 486 +A FPFVE PD R ++DGV LL ELGA+ T + + + Sbjct: 496 MARFPFVEKPDTRAVRDGVMLLRELGALETVVEPTPAVVEPVETTPSPVVEPPSPVVEPV 555 Query: 487 --------------------------------TPLGRQLSQLPVDPRLARMVLEAQKHGC 514 T +GRQL+QLP+DPRLARM++E + G Sbjct: 556 ETTPPPSDVVSTGSTTGGRTSTTGAGRTTTRLTTVGRQLAQLPMDPRLARMIIEGARRGA 615 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 RE +I +ALS+QDPRERP + ++ +D+ H RF D SDFL+++NLW YL +QQ+ LS Sbjct: 616 AREVAVIAAALSVQDPRERPAEVRERADQLHARFADPTSDFLSYLNLWEYLRDQQRDLSG 675 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA----------------- 617 +AFRRLC+ ++LNYLRVREWQD+ QLRQ+ ELGI ++S + Sbjct: 676 SAFRRLCKAEHLNYLRVREWQDVVAQLRQMANELGINLSSRASVVEPVETTPRVDGGVVS 735 Query: 618 -----------------------EYREIHIALLTGLLSHIGMKDAD-------------- 640 + IH ALL GLLS +GM+D Sbjct: 736 TGSTTAEGADDGQPRSGEWRRVWDGDTIHRALLAGLLSQVGMQDTGEIKASSVAHLKGEA 795 Query: 641 ------------KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688 + EY GAR ARF+IFPGS L KKPP WVM ELVETSRLW R ARI Sbjct: 796 RARALRQQAKRVRNEYLGARGARFAIFPGSPLSKKPPAWVMAGELVETSRLWARDVARIQ 855 Query: 689 PEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCREL 748 PEW E +A L +RTYS+PHW QGA MATEKV +YG+PIV+ R V ++++DP RE+ Sbjct: 856 PEWAEELAGDLARRTYSDPHWSTKQGAAMATEKVLLYGVPIVSDRPVLFARVDPEAAREM 915 Query: 749 FIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVI 808 FIRHALV+G+W T H FF EN +L E E++E +SR+R ++ ++ LF FYD+R+ V+ Sbjct: 916 FIRHALVQGEWTTHHTFFAENRRLLEEAEQVEARSRQRGLVASEDDLFAFYDERVPASVV 975 Query: 809 SARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPG 868 SARHFD WW + RETPDLL F L+ + + +P+ W QG L L L+YQF PG Sbjct: 976 SARHFDQWWSRARRETPDLLTFRLEDLV--DVDAVDPSQFPSSWTQGELTLPLTYQFRPG 1033 Query: 869 ADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAF 928 +DADGVTVH+PL +L ++ SGF+W +PGL EL +A I+SLPK VR VPAP+ A Sbjct: 1034 SDADGVTVHVPLSVLPRLSPSGFDWMVPGLLEELCVATIRSLPKAVRVQLVPAPDVGNAV 1093 Query: 929 -------------LGRVKPLELPLLDSLERELRRMTGVTVDREDWHW---DQVPDHLKIT 972 + R + P + R +R + V V + W +++P HL++T Sbjct: 1094 AGWLRQNTPTWEDMARAGDMAEPFHVAFTRAVRALRDVVVPGDAWDTERVERLPAHLRMT 1153 Query: 973 FRVVD--------------------------------------------DKNKKLKEGRS 988 FRVV+ + E + Sbjct: 1154 FRVVESGVKSGGPTTAAGSRGSGRGGRGRGRDGRGSPSAAAAVSPSGTGAAGAAIDESKD 1213 Query: 989 LQDLKDALKGKVQ 1001 L L+ L K + Sbjct: 1214 LLALQRRLAPKAE 1226 Score = 242 bits (619), Expect = 6e-62, Method: Composition-based stats. Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 25/309 (8%) Query: 1013 EQSGLHIWSFG----QLPESYEQK-RGNYKVKAWPALVDERD-----SVAIKLFDNPLEQ 1062 E+ GL W G +LP+ G V+ +PALV+E +VA+++ + LEQ Sbjct: 1312 ERLGLATWPDGLPDGRLPDVVSTDLGGGVVVRGYPALVEEPGPKQEPTVALRILADALEQ 1371 Query: 1063 KQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL-- 1120 G+RRLLL + + L L +PY L +D V L Sbjct: 1372 PATHARGVRRLLLAENRLTAGRVTSRWSGTQALTLAASPYRNTNLLAEDLQLATVMALTS 1431 Query: 1121 ----------IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL 1170 + + E + A VR L D +A V LTA + + Sbjct: 1432 PAADLAPGTPAGPHAVQIRDAESYNAAKAHVRTHLEDETYRVAGHVVAALTAWRTLESEV 1491 Query: 1171 KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRD 1230 + + + L DI+ L++ GFV+ +RL +RYL+A RLEK PHRD Sbjct: 1492 RKTSSLALLNTLQDIREHAATLIHDGFVSATPPRRLPHLVRYLRAASYRLEKAQASPHRD 1551 Query: 1231 RAQMLKVENVQQ---AWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 ++ +V++ + P ++ E+RW+IEELRVS FAQQLGT +S Sbjct: 1552 AELAWRIHDVEEAYAKARAAYAAGPADAARAAELAEVRWLIEELRVSLFAQQLGTDGTVS 1611 Query: 1288 DKRILQAME 1296 +KRI + + Sbjct: 1612 EKRIRKTLA 1620 >UniRef50_C5BVQ3 ATP-dependent helicase HrpA n=3 Tax=Bacteria RepID=C5BVQ3_BEUC1 Length = 1471 Score = 1112 bits (2877), Expect = 0.0, Method: Composition-based stats. Identities = 489/1117 (43%), Positives = 655/1117 (58%), Gaps = 89/1117 (7%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL-------------NL 315 D E DQ AI AVDEL+ GD+L+F SGEREIRD ADAL Sbjct: 357 DEELDQPTAICRAVDELTALGPGDVLVFCSGEREIRDAADALASHLGTRYTAPGARNTAP 416 Query: 316 RHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 E+LPLYARLS +EQ+RVF H RR+VLATNVAETSLTVPGI YV+D G ARISRYS Sbjct: 417 GAVEVLPLYARLSAAEQHRVFAPHPYRRVVLATNVAETSLTVPGIHYVVDTGLARISRYS 476 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLAS 435 RTKVQRLPIEPISQASANQR GRCGRV++G+ IRLYS DF RPEFT+PEILRT+LAS Sbjct: 477 QRTKVQRLPIEPISQASANQRSGRCGRVADGVAIRLYSRGDFDRRPEFTEPEILRTSLAS 536 Query: 436 VILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD--EQASAYKLTPLGRQL 493 V+LQM ALGLG + AFPFV+ PD R I+DGV LL ELGAI + A +LT +GRQL Sbjct: 537 VVLQMAALGLGRMDAFPFVDPPDTRAIRDGVALLTELGAIEEGQGDDAEDVRLTDVGRQL 596 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKES 553 +QLP+DPRL RM++EA + G VRE M++ +ALS+QD RERP D QQA+D+KHRRF D S Sbjct: 597 AQLPIDPRLGRMLVEAGRLGVVREVMVLVAALSVQDVRERPADHQQAADDKHRRFADPTS 656 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI--- 610 DFL LW YL +QQKA+ S+AFRRLCR+++L+YLRVREWQD++ QLRQ+ K LG+ Sbjct: 657 DFLTLYTLWTYLQDQQKAMGSSAFRRLCRSEFLHYLRVREWQDVHAQLRQLGKGLGLRPE 716 Query: 611 -----------PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 V + +H ALL GLLSH+G D ++EY GAR +RF +FPGS Sbjct: 717 PRADDAPAGVGDVRKPKVDSDAVHRALLAGLLSHLGSWDERRREYAGARGSRFVVFPGSS 776 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 L +KPP W++ AELVETSRL+ R AARI PEW E +HL+KRTYS P W QGA M Sbjct: 777 LARKPPAWIVAAELVETSRLFARTAARIQPEWAEQAGEHLVKRTYSGPFWSAKQGAAMCH 836 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 EKV ++G+PIVA R V ++++DPA RE+F+R+ALVEG+W+T HAF R N ++ E ++ Sbjct: 837 EKVLLFGVPIVADRVVPFARVDPAAAREMFLRNALVEGEWRTHHAFVRRNAEVLDEARQI 896 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E ++RRR +LVDDE L +F+D+R+ V +AR FD+WWK R PDLL + +L+ Sbjct: 897 EDRARRRGLLVDDEALVDFFDERVPESVTTARAFDAWWKDARRADPDLLTYTLDLLVP-T 955 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 A + +P W QG+L L L+YQF PG DADGVTVH+P+ +LN+V +GF+W +PGL Sbjct: 956 AHAVDDAGFPRTWTQGDLTLPLTYQFTPGTDADGVTVHVPIAVLNRVRPAGFDWLVPGLL 1015 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP---------LELPLLDSLERELRRM 950 +LV A I++LPK VR VPAP+ A+A + R+ ++ +R + Sbjct: 1016 TDLVTATIRALPKQVRVQLVPAPDVAQAVVARLPDWADVAPAPDGAPSFHEAFASAVREV 1075 Query: 951 TGVTVDREDWHW--DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA 1008 V V E +++P HL++TFRV+ ++ ++L EG SL L+ L + Q + + Sbjct: 1076 RDVVVPAEALEEADERLPAHLRMTFRVLGERGQELDEGHSLVALQRRLAAQAQSAVRSAV 1135 Query: 1009 DDGI---------------------------EQSGLH-------IWSFGQLP------ES 1028 + EQ G + ++ +P E Sbjct: 1136 RAALADASRTAAVPAGPVASPETTPTTAESGEQQGRTGGAEVDTVRTWADVPGEAIPAEL 1195 Query: 1029 YEQKRGNYKVKAWPALVDERD------SVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPI 1082 ++ +PALV E D VA+++ + + +G+R LLL P Sbjct: 1196 ATTGPAGLDIRGYPALVVEPDPDGGRTRVALRVLADAERARAQHADGVRALLLQEFAIPT 1255 Query: 1083 KYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP-VWTEEGFAALHEKV 1141 + + + L L +PY L+ D V +L V + + V Sbjct: 1256 ARVTSRWTGREALTLASSPYRDTDALVRDVQVAAVAQLTAGTDLTTVRDAASYRRVRADV 1315 Query: 1142 RAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGN 1201 R L D V + +V + L A ++ ++ M + L+ ++ LVY GFV Sbjct: 1316 RDHLEDAVYGVVARVVEALQAHRELDSAVRASTSMALLGTLTQVRDHAASLVYDGFVART 1375 Query: 1202 GFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDV 1261 + L RYL+A RL K A +P RD +V ++ A + Sbjct: 1376 PPESLRHLARYLRADGYRLAKAAENPGRDATLAWEVSELEDALASVRATH-LSPDRAARA 1434 Query: 1262 KEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + +RW +EELRVS FAQQLGT P+S KRI A+ Q+ Sbjct: 1435 EAVRWQLEELRVSLFAQQLGTAQPVSAKRIRTALAQV 1471 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 150/232 (64%), Positives = 180/232 (77%), Gaps = 15/232 (6%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 + ++ +R AA P + +P +LPVS ++ DI AIRDHQVV+VAGETGSGKTTQLPKIC+E Sbjct: 47 SEEQLAVRRAALPTLAFPPDLPVSARRDDIAAAIRDHQVVVVAGETGSGKTTQLPKICLE 106 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 LGRGI G IGHTQPRR+AAR+VA RIA E E GG IGY+VRF+DHV T+VK+MTDG Sbjct: 107 LGRGITGTIGHTQPRRIAARSVAERIASECDVELGGAIGYQVRFTDHVGPTTLVKVMTDG 166 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 ILL+EIQ+D L +YDTII+DEAHERSLNIDF+LGYL+ LLPRRPDLK+IITSATID ER Sbjct: 167 ILLSEIQRDPTLSRYDTIIVDEAHERSLNIDFILGYLRRLLPRRPDLKVIITSATIDSER 226 Query: 237 FSRHF---------------NNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 F+ HF AP+IEV+GRTYPVE+RYRP+V +D E D Sbjct: 227 FAAHFAQRDGVVVPRIGDPGTPAPVIEVNGRTYPVEIRYRPLVPGEEDEEPD 278 >UniRef50_A3M3Z2 ATP-dependent helicase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M3Z2_ACIBT Length = 939 Score = 1099 bits (2844), Expect = 0.0, Method: Composition-based stats. Identities = 451/954 (47%), Positives = 627/954 (65%), Gaps = 40/954 (4%) Query: 99 AGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKV 158 AGETGSGKTTQLP+I M GRG+ G+IGHTQPRRLAAR+V+ RIAEE+ + G IG+K+ Sbjct: 2 AGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARSVSQRIAEEVGEKLGESIGFKI 61 Query: 159 RFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP 218 RF++ S +++V+LMTDGILLAE+ DR L +YDTIIIDEAHERSLNIDF++GYLK+LLP Sbjct: 62 RFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIIDEAHERSLNIDFIMGYLKQLLP 121 Query: 219 RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE---------EADD 269 +RPDLK+I+TSAT+D RFS +FNNAPI EV GR+YPVEVRYRPI E E DD Sbjct: 122 KRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVEVRYRPISEMNIGGSDDDEFDD 181 Query: 270 TERDQLQAIFDAVDELSQE-------SHGDILIFMSGEREIRDTADALNKLNLRHTEILP 322 E + +A+ AV+E + H DILIF S E+EIR+ + L K RHTEILP Sbjct: 182 FEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQEIRELQETLQKYGPRHTEILP 241 Query: 323 LYARLSNSEQNRVFQSHS-GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 LYARL+ SEQ ++F GRRI++ATNVAET+LTVP I+YVID G ARISRY+YR++VQ Sbjct: 242 LYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNIRYVIDSGFARISRYNYRSRVQ 301 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMT 441 RLPIE ISQA+ANQRKGRCGRV+ G+CIRLYSE+DFLSRPEFT+PEI RTNLASVILQM Sbjct: 302 RLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSRPEFTEPEIKRTNLASVILQMQ 361 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 +LGLG++ F F+E PD R + DG +LL ELGA+ + +LT +G+ ++++P+DPR Sbjct: 362 SLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN----ELTKVGQMMARMPIDPR 417 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL 561 LARM++ G ++E +++ SAL++QD RERP DKQ +D+KH F + +SDFL ++ L Sbjct: 418 LARMIVGGAHFGVLKEILVVVSALAVQDARERPADKQMQADQKHALFKEADSDFLFYLKL 477 Query: 562 WNYLGEQQKA-LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 W+ L + +A +S N R+ + +L++LR+REW+ + QL ++ + L + N +PA Y Sbjct: 478 WDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVELAEGLKLSFNEKPANYE 537 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 +H ALLTGLLS I K ++ + R + +FP S L K WVM E+VETS+++ Sbjct: 538 NLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKTNTAWVMAFEMVETSQVY 597 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R A+IDPEW+ A+ L+K Y EPHW + G V A +++++GL I R VN+ ++ Sbjct: 598 LRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQISLFGLIIEPKRLVNFEKV 657 Query: 741 DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYD 800 D E+F+R AL G+ T F + NL EVE +E K RRRD++VD+ET+++FY Sbjct: 658 DQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFYA 717 Query: 801 QRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLR 860 +I ++ S R F+ W V + P L E L ++ + +P+ H G L+L Sbjct: 718 SKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLN--DRPTTQQFPDHLHNGQLRLA 775 Query: 861 LSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVP 920 +Y+F+P D DG TV IP+ L QV+E+ + W IPG R +L+ AL+K+LPK RRN VP Sbjct: 776 TTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEALLKALPKDKRRNLVP 835 Query: 921 APNYAEAFLGRVKP--LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDD 978 P+ A + + L + L LR G + +D+ ++++ +L +V+D+ Sbjct: 836 IPDTARKLMQGIDAVHLRQHIFSYLAFALR---GEQITEKDFSFERIDPYLVPFIKVIDE 892 Query: 979 KNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQK 1032 K K + +GR L +LK + + + + F PE+ K Sbjct: 893 KGKLIAKGRDLAELKARCRVETHRPVKQQKGE-----------FKTFPETLPLK 935 >UniRef50_C1RH11 ATP-dependent helicase HrpA (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RH11_9CELL Length = 1120 Score = 1090 bits (2820), Expect = 0.0, Method: Composition-based stats. Identities = 526/976 (53%), Positives = 670/976 (68%), Gaps = 97/976 (9%) Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 + P I YP+ LPVS ++Q+I +AIRDHQVV+VAGETGSGKTTQLPKI +ELGRG G Sbjct: 133 QVVLPAIVYPEQLPVSARRQEIADAIRDHQVVVVAGETGSGKTTQLPKIALELGRGRAGQ 192 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRR+AARTVA RIA+EL GG +GY+VRF+D SD+T+VK+MTDGILLA+IQ+ Sbjct: 193 IGHTQPRRIAARTVAERIADELGVPLGGVVGYQVRFTDESSDSTLVKVMTDGILLAQIQR 252 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-- 242 D +L YDT+IIDEAHERSLNIDF+LGYL LLP+RPDLK++ITSATID +RF+RHF Sbjct: 253 DPMLRMYDTLIIDEAHERSLNIDFILGYLTRLLPQRPDLKLVITSATIDSDRFARHFGSP 312 Query: 243 ---------NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDI 293 AP++EVSGRTYPVE+RY+P+ + D +RD + I +AVDEL GD+ Sbjct: 313 ATAAAEDRTPAPVVEVSGRTYPVEIRYQPLSPD-DGPDRDLVTGITEAVDELMAAGPGDV 371 Query: 294 LIFMSGEREIRDTADALNK---------LNLRHTEILPLYARLSNSEQNRVFQSHSGRRI 344 L+F+SGEREIRD DAL + EI+PLYARLS +EQ RVF++H+ RR+ Sbjct: 372 LVFLSGEREIRDAEDALRGSLGPRVTDPRHPDGVEIVPLYARLSAAEQRRVFEAHTTRRV 431 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 +LATNVAETSLTVPG++YV+DPGTARISRYS TKVQRLPIEP+SQASANQR GR GRV+ Sbjct: 432 ILATNVAETSLTVPGVRYVVDPGTARISRYSKATKVQRLPIEPVSQASANQRSGRSGRVA 491 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEAPDKR 460 GI IRLYSE+DF SRPE+T+PEILRT+LASVILQM A+G+ ++ FPFV+ PD R Sbjct: 492 PGIAIRLYSEEDFESRPEYTEPEILRTSLASVILQMIAVGVVTSPDEVVDFPFVDPPDVR 551 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 ++DGV LL EL A+ Q +LT GR L+QLP+DPRLARMV+EA + G RE ++ Sbjct: 552 AVRDGVALLTELHALEV--QGGRTRLTETGRALAQLPIDPRLARMVVEAGRRGVAREVLV 609 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 I +ALSIQDPRERP + ++ +D HRRF D SD L ++NLW YL ++Q+ LS +AFRRL Sbjct: 610 IAAALSIQDPRERPAESRETADALHRRFADPSSDLLTYLNLWTYLRDRQRELSGSAFRRL 669 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA----------------------- 617 C+ ++L++LRVREWQD+ TQLRQ+ K+LG P Sbjct: 670 CKAEHLHFLRVREWQDVVTQLRQMAKDLGFEAKGAPTPASDEVPAAAGHGRDGRRDGGRH 729 Query: 618 -------------------------EYREIHIALLTGLLSHIGMK--------------- 637 + IH ALL GLLS IGM+ Sbjct: 730 TPTGAPTQDAGSVERPDALQTRWTWDGDAIHRALLPGLLSQIGMQVVTDVAAGAPAKGRD 789 Query: 638 -------DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPE 690 + EY GAR ARF+IFPGSGL ++PP WVM AELVETSRLW R A++DP Sbjct: 790 GKPRRPDSRARNEYLGARGARFAIFPGSGLSRRPPSWVMAAELVETSRLWARDVAKVDPA 849 Query: 691 WVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI 750 WVE A HL+KRTY++P W QGA M EKV +YG+P+VA R+V ++IDP RELF+ Sbjct: 850 WVEEAAAHLVKRTYADPAWSTRQGAAMVNEKVLLYGVPVVAQRRVLLARIDPEHARELFV 909 Query: 751 RHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISA 810 RHALV+G+W T H FF EN +L AE E L ++RRRD++VDD+ LF+FYD R+ +V+SA Sbjct: 910 RHALVQGEWTTHHTFFHENRRLLAEAEALAARARRRDLVVDDDALFDFYDARVPPEVVSA 969 Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 RHFD WWK R PDLL+F + +L+ + A +I + +P+ W QG L L+YQFEPG + Sbjct: 970 RHFDRWWKDARRADPDLLSFTRELLVGDDAAEIDEGAFPSRWPQGELSFPLTYQFEPGTE 1029 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 ADGVTVH+P+ L +V GF+W +PG+R EL+ A I++LPKPVR VPAP+ A A Sbjct: 1030 ADGVTVHVPISQLPRVRPEGFDWMVPGMRAELLTATIRALPKPVRVQLVPAPDVARAVDA 1089 Query: 931 RVKPLELPLLDSLERE 946 + +D++ Sbjct: 1090 WLTEHAASWVDTVRAA 1105 >UniRef50_C0VY42 HrpA family ATP-dependent helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY42_9ACTO Length = 1577 Score = 1064 bits (2753), Expect = 0.0, Method: Composition-based stats. Identities = 494/1024 (48%), Positives = 643/1024 (62%), Gaps = 131/1024 (12%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 ++ + + ++ + +E + + R + P I +P+NLPVS +K +I AI++HQ Sbjct: 5 QQTRTFNKKRRHYTNRPREFKFSKEVLAARATSLPVIDFPENLPVSARKDEIANAIKNHQ 64 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGC- 153 VVIV+GETGSGKTTQLPKIC++LGRGI LIGHTQPRRLAAR VA RIAEEL + GG Sbjct: 65 VVIVSGETGSGKTTQLPKICLQLGRGIAKLIGHTQPRRLAARAVATRIAEELNSTVGGEG 124 Query: 154 -IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGY 212 +GY+VRF+D VS T+VKLMTDGILLAEIQ D LL +YDT+IIDEAHERSLNIDFLLG+ Sbjct: 125 IVGYQVRFTDQVSSATLVKLMTDGILLAEIQNDPLLNRYDTLIIDEAHERSLNIDFLLGF 184 Query: 213 LKELLPRRPDLKIIITSATIDPERFSRHF-----NNAPIIEVSGRTYPVEVRYRPIVEEA 267 +K+LLP+RPDLK+IITSATID RF++HF N AP+I VSGRTYPVEVRYRP+ Sbjct: 185 IKQLLPKRPDLKVIITSATIDSARFAQHFADAHGNPAPVITVSGRTYPVEVRYRPLSPAE 244 Query: 268 DDT--------------------------------ERDQLQAIFDAVDELSQESHG---- 291 + D L AI A DEL E G Sbjct: 245 PPAADTAETDEESFKNLVLEDPDADLALNGYGYGQDIDYLSAICAATDELCAEPLGNAEN 304 Query: 292 ---DILIFMSGEREIRDTADALN---------------KLNLRHTEILPLYARLSNSEQN 333 DILIF+ GER+IRDT +AL K L E++PLY+RLS +EQ Sbjct: 305 PDRDILIFLPGERDIRDTTNALRDHLGTRFLKAGEASGKSPLDAIEVVPLYSRLSAAEQQ 364 Query: 334 RVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASA 393 +F H RRIVLATNVAETSLTVPGIKYVIDPG ARISRYS RTKVQRLPIEPISQASA Sbjct: 365 LIFAPHPRRRIVLATNVAETSLTVPGIKYVIDPGLARISRYSNRTKVQRLPIEPISQASA 424 Query: 394 NQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPF 453 NQR GRCGRVS+G+ IRLYS+ DF +RP FT+PEILRT+LASVILQM ALGLG + FPF Sbjct: 425 NQRSGRCGRVSDGVAIRLYSQKDFQNRPRFTEPEILRTSLASVILQMAALGLGLVEKFPF 484 Query: 454 VEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHG 513 ++AP ++I+DGV LL E+GAIT +Q +LT +GR L++LP+DPRL RM+LEA K G Sbjct: 485 LDAPAPKSIKDGVALLAEIGAITVSKQ--ELRLTKIGRDLAKLPIDPRLGRMLLEADKLG 542 Query: 514 CVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 C E ++I +ALS+QD RERP QQ +D H RF D SDF+ ++NLW YL + LS Sbjct: 543 CSSEVLVIVAALSMQDVRERPEAYQQDADAAHARFLDPTSDFITYLNLWRYLRVCDRELS 602 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN-------------------- 613 ++A RRLC+ ++L+YLR REW+D+ +QL + K L + + Sbjct: 603 NSALRRLCKKEFLHYLRFREWEDVVSQLVDLAKPLRLSLEPLSLPAKSDLARARQMSGAQ 662 Query: 614 -------------SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 + IH ALL GLLS++G + K +Y GAR +RF+++PGSGL Sbjct: 663 DGTVQAVLDFTEGTSSRNADSIHQALLVGLLSNLGAWNQQKSDYEGARGSRFTVWPGSGL 722 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 +K WVM AELVETSRL+ R ARI PEWVE +A L+KR YSEP W ++GA + E Sbjct: 723 ARKHYDWVMAAELVETSRLFARTVARIKPEWVERIAPDLVKRVYSEPFWAASRGAALVRE 782 Query: 721 KVTVYGLPIVAARKVNYS------QIDP-------------------------ALCRELF 749 K +YGL + A R+V ++D L R++F Sbjct: 783 KTMLYGLTLTADREVLLGGLPADIKLDRCASAGFTIGARAGASADGLQGMTPAELARDMF 842 Query: 750 IRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVIS 809 IRHALVE W+ +AF R+N +L + EH+ R ++ D+ +F F+D+R+ V+S Sbjct: 843 IRHALVENQWRADYAFIRDNQRLLDSIRADEHRFR-TGGVISDDAIFAFFDERVPASVVS 901 Query: 810 ARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA 869 A HFD WW++ + +L + L+ S D+P W QG +L L Y+F PG+ Sbjct: 902 ATHFDGWWRRQRNK--RVLLLSREALLPGEFSS-SAADFPAVWRQGEFELPLHYEFNPGS 958 Query: 870 DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL 929 + DGV+V IPL LL +V++ GF W +PG+ EL+ +I++LPK +R+ VPAP+ A Sbjct: 959 ERDGVSVRIPLALLPRVQDQGFAWLVPGMLEELLTGVIRALPKQLRQQLVPAPDVASKCA 1018 Query: 930 GRVK 933 ++ Sbjct: 1019 AWLR 1022 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 92/436 (21%), Positives = 157/436 (36%), Gaps = 79/436 (18%) Query: 939 LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKG 998 S + + + GV V E W ++P HL+ TF VVD+K K+L + L L+ L Sbjct: 1141 FFASFTQAAKVLKGVDVPNELWDEIELPPHLRFTFVVVDEKGKELLASKELAWLQKELAQ 1200 Query: 999 KVQETLSAVADDGI---------------------------------------------- 1012 + Q + + + Sbjct: 1201 RSQTAVRSAMRSALTSALEATEGTSSPKGRGKDRPRKKNLPGVTAPNVGTAANAPTPKNA 1260 Query: 1013 -------EQSGLHIWSF-----GQLPESYE-QKRGNYKVKAWPAL-VDERDS-------- 1050 E +GL W LP+ E V+A+PAL D +S Sbjct: 1261 AQTQLFKETTGLTDWPALGTADDALPKDIEATTAQGLMVRAFPALHTDTAESYANNKGTS 1320 Query: 1051 ----VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVL 1106 K++ E A GL +L+L + + K L L +PY Sbjct: 1321 LHFSAGTKIYATLHEADAAHQAGLVQLVLAKTALTQTRITTRWSGKESLLLAASPYANTT 1380 Query: 1107 ELIDDCISCGVDKLI---DANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 L+ + V+ L+ + + + F L V+ L D V ++ K + L A Sbjct: 1381 ALVAAAQTAAVNALLNDYAMHPALIRSRSSFNELCAWVKPRLEDKVYELLKYLINALAAS 1440 Query: 1164 FNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 ++ ++ +M + +KA L+ GF T + R+++A E R++K Sbjct: 1441 ADLETTVRAHGTQSMLQVNAAVKAHAQSLLNDGFFTQIPPLWIPHVARFIKADELRVKKA 1500 Query: 1224 AVDPH---RDRAQMLKVENVQ-QAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ 1279 A +D + ++ Q+ ++E +W++EELRVSYFAQ+ Sbjct: 1501 AQSAQALAKDANLQRDLAELEHTLLQRQAGTGLNDAARLTQLREAQWLLEELRVSYFAQE 1560 Query: 1280 LGTPYPISDKRILQAM 1295 LGT +S KR+ + Sbjct: 1561 LGTSQKVSAKRLWNLL 1576 >UniRef50_D0W5V2 ATP-dependent helicase HrpA n=3 Tax=Neisseria RepID=D0W5V2_NEICI Length = 1417 Score = 984 bits (2544), Expect = 0.0, Method: Composition-based stats. Identities = 448/840 (53%), Positives = 584/840 (69%), Gaps = 60/840 (7%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPD 75 + +DR K ++ ++ ++ L R AA P+ + + Sbjct: 5 FSQTLSKDRHFLQSAFKNPNKY-------GGLSKVEEKYRKSHEIFLKRLAALPKPEFDN 57 Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LPV +K ++I +AI ++QV I+ GETGSGKTTQLPKIC+ELGRG GLIGHTQPRRLAA Sbjct: 58 TLPVHEKLEEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAA 117 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 R+VA RIAEELK+E G +GYKVRF+DH S + VKLMTDGILLAE Q DR L YDTII Sbjct: 118 RSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTII 177 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 IDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID ERFS+HFN+AP++EVSGRTYP Sbjct: 178 IDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNSAPVLEVSGRTYP 237 Query: 256 VEVRYRPIVE-EADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN 314 VE+ YRP+ + DD E + I DA DEL+ GDIL+F+ GEREIR+ A+AL K Sbjct: 238 VEILYRPLTSKDEDDAEVELTDVIVDAADELAGHGEGDILVFLPGEREIREAAEALRKST 297 Query: 315 L-RHTEILPLYARLSNSEQNRVFQSHS-GRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 L R+ EILPL+ARLS++EQ+++F RRIVLATNVAETSLTVPGIKYVID G AR+ Sbjct: 298 LRRNDEILPLFARLSHAEQHKIFHPTGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVK 357 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 RYS R KV++L +E ISQA+A QR GRCGRVS G+CIRL+SE+DF +RPEFTDPEI+R+N Sbjct: 358 RYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNNRPEFTDPEIVRSN 417 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LA+VIL+M +L LGD+AAFPF+E PD R I DG ++L ELGA+ LT LG Q Sbjct: 418 LAAVILRMASLNLGDVAAFPFLEMPDSRYINDGFQVLLELGAVNEHN-----GLTRLGEQ 472 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 ++ LP+DP++AR++L A+KH C+ E ++I SALSIQDPRERP++ + A+ + H RF DK+ Sbjct: 473 MAHLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQ 532 Query: 553 SDFLAFVNLWNYL-GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI- 610 SDFLA++N+W+ E+ K LS+ + CR +L++LR+REW++++ QL Q E+G+ Sbjct: 533 SDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLT 592 Query: 611 ----------------PVNSEPAE---------------------------YREIHIALL 627 P S+ + Y +IH ALL Sbjct: 593 TKEATFRRPPTQEQLKPSESQGDQDLSAKLKQKQLDKKQHRAQIHAAKEAGYEQIHRALL 652 Query: 628 TGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 TGL++++GMK D +YTGAR +RF +FP S LFK PKWVM AEL+ET+RL+ R A I Sbjct: 653 TGLITNVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELMETTRLYARDVAVI 712 Query: 688 DPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRE 747 PEW+E A HL++ Y EPHWE+ +G V+A+E+VT+YGL ++ R V+Y ++ P RE Sbjct: 713 QPEWIEQEAPHLVRYHYYEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPEEARE 772 Query: 748 LFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDV 807 +FIR ALV + + AFF N KL E+ ELEHKSR++D+LVDDE LF FY++R+ V Sbjct: 773 IFIRGALVAQESNLQTAFFAHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLPELV 832 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 141/509 (27%), Positives = 244/509 (47%), Gaps = 16/509 (3%) Query: 797 EFYDQRI-SHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQG 855 F R+ + R F++W K R+ P LL + L++ A I++ +P FW Sbjct: 906 AFQKGRLKPLPLADIRTFEAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTA 965 Query: 856 NLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVR 915 + K +LSY+FEP DGVT+ +PL +LN++ EW +PG+ RE + LIK+LPK +R Sbjct: 966 DGKFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPKQIR 1025 Query: 916 RNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG-----VTVDREDWHWDQVPDHLK 970 R VP P++ FL + ++ L + + G +D++ W ++P+H Sbjct: 1026 RICVPVPDFITKFLESNPDRQAAIIPQLAHFIAKSAGDMRILEQIDQDAWAAQELPEHCY 1085 Query: 971 ITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE 1030 + R++DD ++L GR L +L+ L T E+ + W G LPES + Sbjct: 1086 LNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTF-RDNTQEFERDNVTAWDIGTLPESIK 1144 Query: 1031 QKRGNYKVKAWPALVDERDS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKL 1089 RG ++ + L E+D +A++LFD +QA G+ L+ L + +K L++ + Sbjct: 1145 FARGKQQLTGYLGLQKEKDGRIALRLFDTSAAAEQAHRLGVIELMKLQLKEQVKDLNKGI 1204 Query: 1090 PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTV 1149 + + + L DD D+ E+ F ++ R+ L Sbjct: 1205 QGFTQAAMLLK-HINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVK 1263 Query: 1150 VDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDT 1209 +++ +++ + A +N +L + +T L L GF T + + Sbjct: 1264 EALSRYLQETVAAYAELNGKL-SKHPLTHLLRLRLQTLLAA-----GFATRTPWAQWPRL 1317 Query: 1210 LRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR-REDEDVKEIRWMI 1268 YL+A+ RLEK + + RD A+ ++ ++Q WQ+ + L + + +WMI Sbjct: 1318 PIYLKAMTLRLEKYSSNLARDDAREADIQELEQMWQEKTDSLIKQGLPISDSLAGFKWMI 1377 Query: 1269 EELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 EELRVS FAQ+L TPYP+S KR+++ E+ Sbjct: 1378 EELRVSLFAQELKTPYPVSVKRLMKVWER 1406 >UniRef50_B4CU07 Helicase-associated domain protein n=2 Tax=Verrucomicrobia RepID=B4CU07_9BACT Length = 1021 Score = 928 bits (2400), Expect = 0.0, Method: Composition-based stats. Identities = 356/1042 (34%), Positives = 546/1042 (52%), Gaps = 72/1042 (6%) Query: 297 MSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 M ER+IRDT + L E++ L+ R+ +EQ R+F RR+++ATN+AETSLT Sbjct: 1 MPTERDIRDTRELLEGSLGSSFEVISLFGRMPAAEQQRIFAPSPRRRVIVATNIAETSLT 60 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 +P I+YV+D G +R+SRY+ RT+ +RLP+E +SQ+SANQR GR GRV +G CIRLY+EDD Sbjct: 61 LPRIRYVVDAGLSRMSRYNPRTRTKRLPVEDVSQSSANQRAGRAGRVQDGTCIRLYAEDD 120 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F +RP FT PEI R NLA VIL+M A LGDI FPF+ P I+ G +LL ELGA+ Sbjct: 121 FSARPRFTQPEIQRANLAEVILRMKAFRLGDIETFPFINPPVSAAIRAGYQLLHELGALN 180 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + LT LGR+L++LP+DP L RM+L+A++ + E +II + LS+ DPRERP + Sbjct: 181 DSNE-----LTSLGRELARLPIDPTLGRMLLQAREEKVLPEMLIIAAGLSVPDPRERPEE 235 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 ++A+ H+ F D +SDFL+ +N+W + + S NA RR C+ +L+ R+REW+D Sbjct: 236 AKEAAATAHKAFADPDSDFLSLLNIWRAAPDAEGRGSGNALRRFCKASFLSLSRMREWRD 295 Query: 597 IYTQLRQVVKE----LGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 I+ QL + E G E Y IH A+L GLL HI + ++ Y + Sbjct: 296 IHRQLADAMDEDAPARGGNRQPEENAYPPIHRAILAGLLGHIAFRQ-ERNVYKASGERLV 354 Query: 653 SIFPGSGLFKKP------------------PKWVMVAELVETSRLWGRIAARIDPEWVEP 694 ++FPGS L+++ P+W++ E+VETS L+ R+ A I+PEW+ Sbjct: 355 TLFPGSNLYERRDKPKKNAAPAKPADKSRQPQWIVAGEIVETSLLFARMVAGINPEWIID 414 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 + HL Y+EP+W G V+ E+V + GL I R V++ +I+P ELFIR AL Sbjct: 415 LGGHLCTFRYTEPYWSAKAGRVLVLERVLISGLEIT-RRHVDFGRIEPEKATELFIRGAL 473 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 V + + H FF EN ++R ++E + R R DE +++FY +RI +V S + Sbjct: 474 VAEEAKLPHRFFSENHQVREKIETALTRVRSRRAHDLDEAMYQFYAERI-TNVSSVHDLN 532 Query: 815 SWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV 874 + + PD L ++ L+ E + +P+ GN L ++Y + PG DADGV Sbjct: 533 RFVRDRIAREPDFLCATETDLVGEDDTTYDRQLFPDQVSLGNTALPVTYAYTPGQDADGV 592 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP 934 TV +PLP+ +Q+ +W +PGLR E + L+++LPK VR+ +P + +P Sbjct: 593 TVRVPLPVASQLTTGQIQWMVPGLREEQIGVLLRALPKTVRKTLMPLEPKVREIVAEFQP 652 Query: 935 LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKD 994 L +L L R V V EDW +P HL+ V+D NK + GR L+ ++ Sbjct: 653 GRGDFLTALADFLSRKYRVMVRAEDWPPQSLPTHLQPRVEVIDRGNKTVAAGRDLEAIQA 712 Query: 995 ALKGK-VQETLSAVADDGIEQSGLHIWSFGQLPESYEQ-KRGNYKVKAWPALVDERDSVA 1052 ++ V+ A E+ GL WS G LPES + G + A+P L V Sbjct: 713 QVQKHDVRTDAWDKAVRKWERRGLTTWSIGDLPESVVVEEVGGAPLLAYPGLALREGEVD 772 Query: 1053 IKLFDNPLEQKQAMWNGLRRLLLL-------NIPSPIKYLHEKLPN------------KA 1093 ++LF E ++A G+RRL L + + L + LP Sbjct: 773 VRLFRQREEAEKASRQGVRRLAELILARDLTRVWKELAGLAKHLPTHAPRQAANFHSALQ 832 Query: 1094 KLGLY---FNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVV 1150 ++ P+ L +D ++ TE F A+ E R EL Sbjct: 833 QMSAKLQPAAPFVTPEALQKSAYQHLLDHVLQLTPVFPLTEARFLAMAETARRELPGLTY 892 Query: 1151 DIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTL 1210 I +V Q+ F++ ++L + + LV F+ +L Sbjct: 893 QIGDRVRQL----FDLREKL-----LASPKRYPGFDQDLQRLVPGDFLARTPHAQLPHLH 943 Query: 1211 RYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEE 1270 RYL+A++ R E+ ++P +D + ++E + +W +++P A++ + RWM+EE Sbjct: 944 RYLRAMQVRAERAVLNPAKDAEKAKQLEP----FARWESRVPEAQQ-----ETFRWMLEE 994 Query: 1271 LRVSYFAQQLGTPYPISDKRIL 1292 RVS FAQ+LGT P S +R+ Sbjct: 995 FRVSLFAQELGTAQPASAQRLK 1016 >UniRef50_Q1C7D5 ATP-dependent helicase HrpA n=4 Tax=Bacteria RepID=Q1C7D5_YERPA Length = 644 Score = 883 bits (2283), Expect = 0.0, Method: Composition-based stats. Identities = 534/644 (82%), Positives = 579/644 (89%), Gaps = 1/644 (0%) Query: 6 KLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 K + TAL +L LMLRD+ R RRLH +K+ NPDA QAI E+ EI A +V R Sbjct: 2 KSSLTALSTQLGELMLRDQQRIQRRLHSARKINNPDAIQAITHEIEAEIAIAMQRVTRRR 61 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 AA P I+YPDNLPVSQKKQDI AIRDHQV+IVAGETGSGKTTQLPKIC+ELGRG+KG+I Sbjct: 62 AACPAISYPDNLPVSQKKQDIYNAIRDHQVIIVAGETGSGKTTQLPKICLELGRGVKGVI 121 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRRLAARTVANRIA+EL T GGC+GYKVRF+D V +NT+VKLMTDGILLAEIQQD Sbjct: 122 GHTQPRRLAARTVANRIADELDTSLGGCVGYKVRFNDQVGENTLVKLMTDGILLAEIQQD 181 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 RLLMQYDT+IIDEAHERSLNIDF+LGYL+ELLP+RPDLK+IITSATIDP+RFS+HFNNAP Sbjct: 182 RLLMQYDTLIIDEAHERSLNIDFILGYLRELLPKRPDLKVIITSATIDPQRFSQHFNNAP 241 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRD 305 IIEVSGRTYPVEVRYRPIV++ADD +RDQLQAIFDAVDEL +ES GDILIFMSGEREIRD Sbjct: 242 IIEVSGRTYPVEVRYRPIVDDADDVDRDQLQAIFDAVDELGRESAGDILIFMSGEREIRD 301 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 TADAL K NL HTE+LPLYARLSNSEQNRVFQSH GRRIVLATNVAETSLTVPGIKYVID Sbjct: 302 TADALIKQNLPHTEVLPLYARLSNSEQNRVFQSHHGRRIVLATNVAETSLTVPGIKYVID 361 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 PGTARISRYS+RTKVQRLPIEPISQASANQRKGRCGRVS+GICIRLYSE DFLSRPEFTD Sbjct: 362 PGTARISRYSFRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYSEQDFLSRPEFTD 421 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEILRTNLASVILQMT+LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI T + Sbjct: 422 PEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIQTASNGHQ-Q 480 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LTPLGRQL+QLPVDPRLARMVL+AQK GCVRE MIITSALSIQDPRERP+DKQQASDEKH Sbjct: 481 LTPLGRQLAQLPVDPRLARMVLQAQKSGCVRELMIITSALSIQDPRERPVDKQQASDEKH 540 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 RRF DK+SDFLAFVNLW+YL EQQKALSS FR+LCR+DYLNYLRVREWQDIYTQLRQVV Sbjct: 541 RRFADKDSDFLAFVNLWDYLKEQQKALSSAQFRKLCRSDYLNYLRVREWQDIYTQLRQVV 600 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 KELGIPVNS A+YR +H A+LTGLLSHIG KD +KQE+T Sbjct: 601 KELGIPVNSVAADYRSVHTAILTGLLSHIGQKDVEKQEFTVNDG 644 >UniRef50_Q09530 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 n=44 Tax=Eukaryota RepID=MOG5_CAEEL Length = 1200 Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 233/679 (34%), Positives = 374/679 (55%), Gaps = 27/679 (3%) Query: 33 GVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRD 92 + K+ + + E K + R + ++LP+ K++++EA+ D Sbjct: 496 SADESKDRNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMID 555 Query: 93 HQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGG 152 +Q+++V GETGSGKTTQ+ + +E G G +G IG TQPRR+AA +VA R+AEE + G Sbjct: 556 NQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGT 615 Query: 153 CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGY 212 +GY +RF D S +T++K MTDG+LL E D L Y I++DEAHER+++ D L G Sbjct: 616 DVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGL 675 Query: 213 LKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTER 272 LK +RP+LK+IITSAT+D +FS +F API + GRT+PVE+ Y + E Sbjct: 676 LKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY------TREPES 729 Query: 273 DQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYA 325 D L+A V ++ E GD+L+F++G+ EI + + L + ++ ILP+Y Sbjct: 730 DYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYG 789 Query: 326 RLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383 L + Q R+F R++V+ATN+AETSLT+ GI YV+DPG + Y+ ++ + L Sbjct: 790 ALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSL 849 Query: 384 PIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTA 442 + PISQA+A QR GR GR G C RLY+E F PEI RTNLAS +LQ+ A Sbjct: 850 VVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKA 909 Query: 443 LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502 +G+ ++ F F++AP ++ + L L A+ D LT LGR++++ P++P L Sbjct: 910 MGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL-----LTKLGRRMAEFPLEPSL 964 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562 +++++ + GC E + I + L++Q+ RP +KQ +D+K +FH E D L + ++ Sbjct: 965 SKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVY 1024 Query: 563 NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREI 622 N + + + C +++ ++ QDI QL ++ + + S + + Sbjct: 1025 NSW------KNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRV 1078 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 A+ +G + +D + T I P S F++ P+WV+ ELV T++ + R Sbjct: 1079 QKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMR 1138 Query: 683 IAARIDPEWVEPVAQHLIK 701 IDP+W+ A K Sbjct: 1139 EVTAIDPKWLVEFAPSFFK 1157 >UniRef50_B5JKC1 ATP-dependent helicase HrpA n=5 Tax=Bacteria RepID=B5JKC1_9BACT Length = 1500 Score = 865 bits (2236), Expect = 0.0, Method: Composition-based stats. Identities = 357/834 (42%), Positives = 504/834 (60%), Gaps = 83/834 (9%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHT 128 +I YP LP+SQ++ +I+ AI+ HQ +++ GETGSGKTTQ+PK+ ++ G G I T Sbjct: 19 QIHYPPELPISQRRDEIVSAIQAHQTIVLTGETGSGKTTQIPKMLLDAGYARSGKKIACT 78 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA +VA R++EEL E G +G K+RF+D S T VK MTDG+LL EI D L+ Sbjct: 79 QPRRVAALSVAKRVSEELGVEFGQEVGAKIRFTDQTSKKTRVKFMTDGMLLTEIHADPLM 138 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 YD +IIDEAHERSLNIDFLLG+L +L RRPDLKI+ITSATID ++FS F++APIIE Sbjct: 139 RDYDAVIIDEAHERSLNIDFLLGHLNQLRARRPDLKIVITSATIDTDKFSTAFDHAPIIE 198 Query: 249 VSGRTYPVEVRYRPIVEEADDT-ERDQLQAIFDAVDELSQE--SHGDILIFMSGEREIRD 305 VSGR YPV++ Y P+ E +D+ + L+ I ++ + E GDIL F+ E++IR+ Sbjct: 199 VSGRVYPVDIIYAPLDELLEDSGDYTYLEGIAESTQRIQDEFGPSGDILAFLPTEKDIRE 258 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 D L R EI+P + RLSN++Q R+FQ+ R+++LATN+AETSLT+PGI++VID Sbjct: 259 AMDLLEDRFGRRLEIIPCFGRLSNADQQRIFQTSPKRKLILATNIAETSLTIPGIRFVID 318 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARISRY+ R + +RLPI ISQ+SANQR GRCGRV++GICIRLYSE D+ SR ++ Sbjct: 319 TGLARISRYNPRGRTKRLPITKISQSSANQRSGRCGRVADGICIRLYSEKDYQSRDIYST 378 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT--DEQASA 483 PEI R NLA VIL+M A LG + FPF++ P I G +LL+ELGA+ + Sbjct: 379 PEIQRANLADVILRMLASRLGHVETFPFIDPPTPAAITAGYQLLQELGALKPPRTQNPEP 438 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 LT GRQL++LP DP + RM+LEA +H E ++I SALSIQDPRERPMD++ A+ + Sbjct: 439 KTLTQTGRQLARLPADPTVGRMLLEANRHNVTHEVLVIASALSIQDPRERPMDREAAARQ 498 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H +F SDFL +N+W L + + LS + R+ C+ ++LNYLR+REW+DIY QL++ Sbjct: 499 AHAQFDHPHSDFLTLLNIWEALHDNFEKLSQSRLRKFCKKNFLNYLRIREWRDIYQQLQR 558 Query: 604 VV----------------KELG---------------------------------IPVNS 614 + K G +P+ Sbjct: 559 SLPKGRSELAREHTTQSPKPTGSKSHLLGEADLTKSRRNPPTTKSNSPLTPHSSPLPIER 618 Query: 615 EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF------------- 661 A Y IH LLTGLLS+IG ++ + Y + N + IFPGS LF Sbjct: 619 ASARYESIHACLLTGLLSNIGRRE-ETNLYRSSANRKPLIFPGSALFIRQARNKKTGKRK 677 Query: 662 ----------KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 KK P+W++ E+VETSRL+ R A IDP W+ V H++ +YS+P + Sbjct: 678 DPGTESGPKKKKSPEWILSGEIVETSRLYARTVASIDPTWILDVGSHIVTHSYSDPDFLP 737 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRH---AFFRE 768 QG V+A E + ++GL I ++V+Y ++DPA E+FIR AL+ D++ F Sbjct: 738 DQGRVVARESIRIHGLEI-QNKQVSYLKVDPAKATEIFIREALLNEDYEAPANWTTFLEP 796 Query: 769 NLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSR 822 N +L + ++ + + +E ++FY +R+ + V S + K + Sbjct: 797 NRRLISRIQNAQTVISVAHWMGVEEAAYQFYKKRLQNQVASNADLNRLLKSLHH 850 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 115/547 (21%), Positives = 205/547 (37%), Gaps = 68/547 (12%) Query: 808 ISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEP 867 S++ F+S +++ + LL ++S L + +P N L + YQ++ Sbjct: 912 SSSKKFES-IREIRGQQSPLLLMQESDLTSSETASVDLSLFPETIQLENSALPIEYQYKA 970 Query: 868 GADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA 927 G DGVT+ +P V ++ +W IPG + AL+K+LPK +R +P A+ Sbjct: 971 GHANDGVTLKLPYAKAKSVNDALLDWLIPGHLEPKIHALLKALPKQIRARLIPLAETAKT 1030 Query: 928 FLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGR 987 ++P L SL+ L++ + DW +PDHL+ + D K + + R Sbjct: 1031 IAADIRPTGDTLTTSLQHHLQKTYSIETYASDWDDTVIPDHLRARVEIHDKTGKPIAQAR 1090 Query: 988 SLQDLKDALKGKVQETLSAV------------------------------ADDGIEQSGL 1017 L L + + A A D ++ L Sbjct: 1091 DAATLHQKLAEQERALSEAATNDTTSLWQKARQTHERQIHSISDLRQVLSATDNRTEAPL 1150 Query: 1018 HIWSFGQLPESYEQ----KRGNYKVKAWPALVDERDSVA---------------IKLFDN 1058 S L Y + A+PAL S++ I LF Sbjct: 1151 PSQSNSPLTTHYSLLLIGCPNGIPLYAYPALRSSPISISTTQNPEPSTQHPEIHISLFRT 1210 Query: 1059 PLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVD 1118 P E + G+ LL + + ++ L + +++G P+ + +L +D + Sbjct: 1211 PEEATASNHAGISALLEHELRRELAWIRTDLKDVSRVGPVAIPFRPIADLKEDVYE-HIR 1269 Query: 1119 KLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTM 1178 + + + E A E+ + Q++ IL + V + Sbjct: 1270 QTLRIHDLDTLDPEALHAARERAHERSKGILYKTVDQLKAILEKRQAL------IVQPPI 1323 Query: 1179 ALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVE 1238 A + A + L+ F+ L YL I R + A +P RD + +++ Sbjct: 1324 AKAYA---ADIDRLLPPDFLRHTPNHILPRIPVYLDTIAHRAKTAAQNPTRDAQRQTQLD 1380 Query: 1239 NVQQAWQQWINK--------LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKR 1290 + +Q Q L + + + ++R+MIEE VS FAQ LGT +PIS K+ Sbjct: 1381 HYRQRLTQLHAGAGSIHHSPLTTHQSANSSIAKLRFMIEEFAVSLFAQHLGTAHPISPKK 1440 Query: 1291 ILQAMEQ 1297 + QA + Sbjct: 1441 LDQAFAE 1447 >UniRef50_Q14562 ATP-dependent RNA helicase DHX8 n=78 Tax=Eukaryota RepID=DHX8_HUMAN Length = 1220 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 238/649 (36%), Positives = 363/649 (55%), Gaps = 29/649 (4%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 ++ + ++LP+ + K+ +++A+ D+Q++IV GETGSGKTTQ+ + E G +G Sbjct: 552 KKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 611 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 IG TQPRR+AA +VA R++EE G +GY +RF D S T++K MTDG+LL E Sbjct: 612 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 671 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L QY I++DEAHER+++ D L G LK+ + +R D+K+I+TSAT+D +FS++F Sbjct: 672 IDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYE 731 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGERE 302 API + GRTYPVE+ Y + E D L A V ++ E GDIL+F++G+ E Sbjct: 732 APIFTIPGRTYPVEILY------TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 785 Query: 303 IRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETS 354 I + L + ++ ILP+Y+ L + Q R+F R++V+ATN+AETS Sbjct: 786 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS 845 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LT+ GI YV+DPG + Y+ +T + +L + PISQA A QR GR GR G C RLY+E Sbjct: 846 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 905 Query: 415 DDFLSRPEFT-DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 + T PEI RTNLAS +L + A+G+ D+ +F F++AP + + L LG Sbjct: 906 RAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLG 965 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ + LT LGR++++ P++P L +M++ + GC E + I S LS+Q+ R Sbjct: 966 ALDDEGL-----LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR 1020 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVR 592 P DKQ +D+K +FH E D L + ++N +N F C +++ +R Sbjct: 1021 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSW-------KNNKFSNPWCYENFIQARSLR 1073 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 QDI Q+ ++ + V S + A+ +G + KD + T Sbjct: 1074 RAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVV 1133 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 I P S LF + P+WV+ ELV T++ + R IDP W+ A K Sbjct: 1134 YIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1182 >UniRef50_Q7PT33 AGAP007212-PA n=4 Tax=cellular organisms RepID=Q7PT33_ANOGA Length = 1288 Score = 860 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 232/669 (34%), Positives = 369/669 (55%), Gaps = 29/669 (4%) Query: 49 EMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTT 108 E K I R+ + +LP+ + + D+++A+ D+Q++IV GETGSGKTT Sbjct: 604 EWKKAIIGGKKSSFGRKTDMSLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTT 663 Query: 109 QLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNT 168 Q+ + E G +G IG TQPRR+AA +VA R+AEE G +GY +RF D S T Sbjct: 664 QITQYLAESGFIARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSQET 723 Query: 169 MVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIIT 228 ++K MTDG+LL E D L Y I++DEAHER+++ D L G LK+ + +RP+LK+I+T Sbjct: 724 VIKYMTDGMLLRECLVDFDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVT 783 Query: 229 SATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-Q 287 SAT+D +FS++F API + GRT+PVE+ Y + E D L A V ++ + Sbjct: 784 SATLDAVKFSQYFFEAPIFTIPGRTFPVEILY------TKEPETDYLDASLITVMQIHLR 837 Query: 288 ESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SH 339 E GD+L+F++G+ EI + L + ++ ILP+Y+ L + Q R+F Sbjct: 838 EPPGDVLLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPP 897 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 R++V+ATN+AETSLT+ GI YV+DPG + Y+ +T + L + PISQA+A QR GR Sbjct: 898 GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGR 957 Query: 400 CGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 GR G RLY+E + PEI RTNLA+ +LQ+ +G+ D+ F F++AP Sbjct: 958 AGRTGPGKAYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPP 1017 Query: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518 ++ + L L A+ + LT LGR++++ P++P L+++++ + C E Sbjct: 1018 VESLVMALEQLHSLSALDNEGL-----LTRLGRRMAEFPLEPNLSKLLIMSVALQCSDEV 1072 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 + I S LS+Q+ RP DKQ +D+K +F+ E D L + ++N ++ Sbjct: 1073 LTIVSMLSVQNVFYRPKDKQALADQKKAKFNQIEGDHLTLLAVYNSW------KNNKFSN 1126 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD 638 C +++ ++ QD+ QL ++ + V S + A+ +G + KD Sbjct: 1127 AWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRVQKAICSGFFRNAAKKD 1186 Query: 639 ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 + T + I P S LF + P+WV+ ELV+T++ + R IDP+W+ A Sbjct: 1187 PQEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKEYMREVTTIDPKWLVEFAPA 1246 Query: 699 LIKRTYSEP 707 + +S+P Sbjct: 1247 FFR--FSDP 1253 >UniRef50_Q6BRT9 DEHA2D13882p n=8 Tax=Saccharomycetales RepID=Q6BRT9_DEBHA Length = 1147 Score = 852 bits (2201), Expect = 0.0, Method: Composition-based stats. Identities = 234/707 (33%), Positives = 380/707 (53%), Gaps = 33/707 (4%) Query: 13 QQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLL--REAARPE 70 Q R + +D R + + + + +++ K + + + Sbjct: 414 QARQEKAKSKDSHDPLNRANNAQNTEIATTNEKTSNFISEWKKSQMDKNISYGKRTSLSI 473 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR----GIKGLIG 126 ++LP+ + D+++A+R++Q +++ GETGSGKTTQ+ + E G + +IG Sbjct: 474 KEQRESLPIFPMRADLIKAVRENQFLVIVGETGSGKTTQIVQYLAEESLDKVEGEQKIIG 533 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AA +VA R+AEE + G +GY +RF D S +T +K MTDG+L E D Sbjct: 534 CTQPRRVAAVSVAKRVAEEYGCKVGEDVGYTIRFEDKTSKDTRMKYMTDGMLQREALNDP 593 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L+ +Y I++DEAHER++ D L LK+ + P+LKIIITSAT+D +FS +FN+ PI Sbjct: 594 LMSRYSVIMLDEAHERTIATDVLFTLLKKAVANNPNLKIIITSATLDANKFSNYFNSCPI 653 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRD 305 + + GRTYPV++ Y + E D L + D+V ++ E GDIL+F++G+ EI Sbjct: 654 VRIPGRTYPVDILY------TREPEMDYLSSALDSVIQIHISEPEGDILVFLTGQEEIDT 707 Query: 306 TADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTV 357 + +AL + + ILP+Y+ L + Q+++F+ R+++LATN+AETS+T+ Sbjct: 708 SCEALYERMKILGDTVPELIILPVYSALPSEMQSKIFEATPPGSRKVILATNIAETSITI 767 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 GI YV+DPG +I+ Y + + L I PISQA ANQR GR GR G C RLY+E F Sbjct: 768 DGIYYVVDPGFVKINAYDSKLGMDSLTISPISQAQANQRSGRAGRTGPGKCYRLYTESAF 827 Query: 418 L-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 T PEI R NL+ IL + A+G+ D+ F F++ P + + ++ L L A+ Sbjct: 828 KTEMLPNTVPEIQRQNLSHTILMLKAMGINDLLNFEFMDPPPTNTMMNALQDLYTLSALD 887 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 D LT LGR++++ P++P LA+ ++ + GC E + I + LS+Q RP D Sbjct: 888 DDGY-----LTKLGRKMAEFPMEPALAKTLIISVDFGCSDEILTIVAMLSVQTVFYRPKD 942 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 KQ+ +D+K RFH + D L +N++ +L+ N ++ C +Y+ ++ Q+ Sbjct: 943 KQKQADQKKYRFHHQYGDHLTLLNVYRSW-----SLNGNN-KQWCVENYIQDRSMKRAQE 996 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + QL ++ + P+ S + AL G H +D + T + P Sbjct: 997 VRKQLVLIMSKYRHPIISCGPNIDRVRKALCAGFFKHSSKRDPQEGYKTLVEQTPVHLHP 1056 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 S LF K P +V+ L+ TS+ + ID +W+ +A K+T Sbjct: 1057 SSALFGKSPDYVIYHTLLLTSKEYMHCVTVIDAKWLLELAPGFFKKT 1103 >UniRef50_Q0RE57 ATP dependent RNA helicase n=10 Tax=Bacteria RepID=Q0RE57_FRAAA Length = 1549 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 370/712 (51%), Positives = 483/712 (67%), Gaps = 30/712 (4%) Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL----------------- 660 + R +H ALLTGLLSHIG D +++EY GAR +RF ++PGS + Sbjct: 839 DPRAVHRALLTGLLSHIGRYDPERREYAGARGSRFMLWPGSAMARGRGRADRAAAADAAI 898 Query: 661 -----------FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHW 709 PP WVM AELVETSRLWGR AARIDP+W+EP+A HL+ R+YSEP W Sbjct: 899 DATGPDAPRQRPSGPPAWVMAAELVETSRLWGRTAARIDPDWIEPLAGHLVHRSYSEPRW 958 Query: 710 ERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFREN 769 R QGAV+A E+VT+YG+PIVA R V YS+IDPALCRELFIRHALVEGDWQTRH FF+ N Sbjct: 959 SRRQGAVLADERVTLYGVPIVAGRPVQYSRIDPALCRELFIRHALVEGDWQTRHEFFQHN 1018 Query: 770 LKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLN 829 +L A+ EELEH++RRRDI+VDDE LF FY +RI DV+S RHFD+WW+K R +PDLL+ Sbjct: 1019 QRLLADAEELEHRARRRDIVVDDEVLFGFYAERIPADVVSVRHFDAWWRKARRGSPDLLD 1078 Query: 830 FEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEES 889 F +S+L+ GA + + DYP+ W G L L LSYQFEPGA ADGVTVHIPLP+LNQV Sbjct: 1079 FPRSLLVSAGAGDVRETDYPDVWRLGELALPLSYQFEPGAAADGVTVHIPLPVLNQVSAE 1138 Query: 890 GFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRR 949 GFEWQ+PGLR ELV ALI+ LPK VRR+FVPAPNYA A L + P + PLL ++E ELRR Sbjct: 1139 GFEWQVPGLREELVTALIRGLPKVVRRSFVPAPNYARAVLTHLTPGQAPLLVAVEHELRR 1198 Query: 950 MTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVAD 1009 M G + R+ W VPDHL+ITFRV D + L EG+ L +K L+ + +E ++A A Sbjct: 1199 MGGPEIPRDSWSLAAVPDHLRITFRVEDARGAVLAEGKDLDAIKQRLRPRTREAVAAAA- 1257 Query: 1010 DGIEQSGLHIWS-FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWN 1068 DG+E++GL W G LP E +RG + VKA+PALVDE +VA++ D EQ+QAMW Sbjct: 1258 DGVERTGLRSWDGVGSLPRVVELRRGGHVVKAFPALVDEGSTVAVRATDTETEQRQAMWA 1317 Query: 1069 GLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPV 1128 G RRL+LL + SPI+ L+ +L N AKL L NP+ +L+DDC+ D+LI A GGP Sbjct: 1318 GTRRLVLLGVASPIRGLNGRLSNAAKLALSHNPHRDAADLLDDCVRAAADRLITAAGGPA 1377 Query: 1129 WTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQ 1188 W E GF AL VRA L + + ++V+Q+L ++ L+ +A ++D + Q Sbjct: 1378 WDEAGFTALLAAVRAGLPEASFAVVREVQQVLALSHTVDLALRDLRAPALAASVADARGQ 1437 Query: 1189 MGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI 1248 + L+YRGFVT G RL D RYL A+E+RLE+L DP RDR V ++A+++ + Sbjct: 1438 LDALIYRGFVTDTGADRLADLARYLTALERRLERLPRDPGRDRINTATVGRAREAYRELL 1497 Query: 1249 NKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 +P R E+++ IRWM+EELRVS FAQ L TPYP+S++R+ +A++ + G Sbjct: 1498 ATVPAGREPGEEIRRIRWMLEELRVSLFAQNLRTPYPVSEERVYRAIDTLLG 1549 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 232/395 (58%), Positives = 286/395 (72%), Gaps = 45/395 (11%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLS 328 + ERDQ QAI DAVDEL E GDIL+F+SGEREIRDTA+AL + +TEI+PLYARLS Sbjct: 352 EPERDQTQAISDAVDELCAEGPGDILVFLSGEREIRDTAEALAREQRPNTEIVPLYARLS 411 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 EQ+RVFQ H+GRR+VLATNVAETSLTVPGI+YVIDPGTARISRYS+RTKVQRLPIEP+ Sbjct: 412 AGEQHRVFQPHTGRRVVLATNVAETSLTVPGIRYVIDPGTARISRYSHRTKVQRLPIEPV 471 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 SQASANQRKGRCGR ++GICIRLYSE+DF RPEFTDPEILRTNLASVIL+M LGLGD+ Sbjct: 472 SQASANQRKGRCGRTADGICIRLYSEEDFAGRPEFTDPEILRTNLASVILRMADLGLGDM 531 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA--------------------------- 481 A F F++ PD R I DG LL ELGA Sbjct: 532 ATFGFLDPPDPRQISDGELLLTELGAFDAGGTGPGRPVADAPAPDGTGASGTDAGAPVQG 591 Query: 482 ------------------SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 + ++TP+GR+L+Q+PVDPRLARMVL + GC+RE ++I + Sbjct: 592 GTGTSGAGASAARAGGTGTGRRITPIGRRLAQIPVDPRLARMVLAGDEQGCLREVLVIAA 651 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 AL+IQDPR+RP++ QQA+DE+H RF D SDFLA++NLWNYL + + LS+N FRR+CRT Sbjct: 652 ALAIQDPRDRPVEHQQAADERHARFADPTSDFLAYLNLWNYLRDARGELSANQFRRMCRT 711 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE 618 ++LNYLR+REWQD++ QL V + LG+ ++ + Sbjct: 712 EFLNYLRIREWQDVHGQLAAVARGLGLNADARAGD 746 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 170/265 (64%), Positives = 208/265 (78%), Gaps = 3/265 (1%) Query: 11 ALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 L RL L D R RRL ++ + P A+Q + +A + D+AA +V R A P Sbjct: 32 ELSARLAELGPGDAHRLGRRLADTRRTREPAARQRALRAIAADTDRAAARVARRRANVPA 91 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 ++YP+ LPV+Q+K +IL AIRDHQVVI+AGETGSGKTTQLPKIC+ELGRG++G+IGHTQP Sbjct: 92 LSYPEILPVTQRKDEILAAIRDHQVVIIAGETGSGKTTQLPKICLELGRGVRGMIGHTQP 151 Query: 131 RRLAARTVANRIAEELKTEP---GGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 RR+AARTVA+RIAEEL T GG +GY+ RF+D V D+T+VKLMTDGILLAEI DR Sbjct: 152 RRIAARTVADRIAEELGTPSPQAGGVVGYQTRFTDQVHDDTLVKLMTDGILLAEISSDRS 211 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L +YDT+IIDEAHERSLNIDF+LGYL+ LLPRRPDLK++ITSATI+ RFS HF +AP+I Sbjct: 212 LRRYDTLIIDEAHERSLNIDFILGYLRSLLPRRPDLKVVITSATIETARFSAHFGDAPVI 271 Query: 248 EVSGRTYPVEVRYRPIVEEADDTER 272 EVSGRTYPVEVRYRP+V A DT+ Sbjct: 272 EVSGRTYPVEVRYRPLVPGARDTDP 296 >UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=10 Tax=Saccharomycetaceae RepID=PRP22_YEAST Length = 1145 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 233/703 (33%), Positives = 383/703 (54%), Gaps = 39/703 (5%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQ------------AAGKVLLREAAR 68 LR + +++ + +P + + + + + + Sbjct: 415 LRKKREIEQQIRKQQSFDDPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYGKRTSL 474 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P LPV + ++++A+RD+Q +++ GETGSGKTTQ+ + E G G+IG T Sbjct: 475 PISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCT 534 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA +VA R+AEE+ + G +GY +RF D +T +K MTDG+L E D + Sbjct: 535 QPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEM 594 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 +Y I++DEAHER++ D L LK+ +RP+LK+I+TSAT++ +FS +F N PII Sbjct: 595 SKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIIN 654 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTA 307 + G+T+PVEV Y + D ++A D V ++ E GDIL+F++G+ EI Sbjct: 655 IPGKTFPVEVLYSQTPQ------MDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCC 708 Query: 308 DALNKL------NLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPG 359 + L ++ ILP+Y+ L + Q+++F+ R++V ATN+AETS+T+ G Sbjct: 709 EILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDG 768 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-L 418 I YV+DPG A+I+ Y+ R +++L + PISQA ANQRKGR GR G C RLY+E F Sbjct: 769 IYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYN 828 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 E T PEI R NL+ IL + A+G+ D+ F F++ P K + + + L L ++ + Sbjct: 829 EMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDE 888 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 KLT LG+++S P+DP L+R +L + + C E + I S LS+Q+ RP D+Q Sbjct: 889 G-----KLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQ 943 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 +D K +FH D L +N++ + +N + C+T++L++ ++ +D+ Sbjct: 944 LEADSKKAKFHHPYGDHLTLLNVYTRWQQ------ANYSEQYCKTNFLHFRHLKRARDVK 997 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 +Q+ + K++G+ + S ++ I ++G + +D+ T I P S Sbjct: 998 SQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSS 1057 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 L+ K ++VM +V TSR + I+P+W+ VA H K Sbjct: 1058 SLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYK 1100 >UniRef50_C9RLX0 Helicase-associated domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLX0_FIBSS Length = 1348 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 348/995 (34%), Positives = 541/995 (54%), Gaps = 99/995 (9%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME------------- 116 +I YP+ LPV + +++ + + HQV+IV +TGSGK+TQLPK +E Sbjct: 7 KIEYPE-LPVVEHREEFFDLLEKHQVIIVKADTGSGKSTQLPKFLLEWFIAKTRDEGRET 65 Query: 117 ---LGRGIKG--------------LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVR 159 KG IG T+PRRLAA ++A+R+ EELK E + K+R Sbjct: 66 REAAAHTSKGEARAHTSEHEVRLFKIGVTEPRRLAAISIADRLREELKDE--ELVSTKIR 123 Query: 160 FSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR 219 F + ++ +K+MTDGILL E ++DRL QY+ I+IDEAHERSLNID LLG K +L R Sbjct: 124 FWEQGTNEAPIKVMTDGILLQEFRKDRLFRQYNAIMIDEAHERSLNIDILLGIFKTVLSR 183 Query: 220 RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD------ 273 RPD K+I+ SAT+D + F ++N+ ++E GRTYPV+V Y + RD Sbjct: 184 RPDFKLIVASATLDAKLFEEFYDNSCVMEAEGRTYPVDVEYYFSDYGSASALRDISGKGD 243 Query: 274 --QLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL-NKLNLRHTEILPLYARLSNS 330 ++ DA+ +L +L F+ ER+I+D L ++L+ ++LPLY R+S Sbjct: 244 SGLIEEARDAILDLETRHRDHLLCFLPTERDIQDLMGELAHELDAATFDVLPLYGRMSPD 303 Query: 331 EQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 EQ R+F+ R+VLATN+AETSLT+PGI YV+D G ARISRY+ + ++Q LP+E IS+ Sbjct: 304 EQRRIFKHTGKTRVVLATNIAETSLTIPGIAYVVDTGMARISRYNAQARIQGLPVEEISK 363 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA 450 ASA QR GR GRV G+CIRLYS ++F R EFT+PEI R+NLA+V+LQ+ +LGL ++ Sbjct: 364 ASARQRTGRAGRVKPGVCIRLYSPENFEKRDEFTEPEIRRSNLANVVLQLRSLGL-ELEN 422 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQ 510 FPF+++P + + L ELGA+T D S+ +T LGR +++LP+D L+ ++L A+ Sbjct: 423 FPFLQSPPHSAFRGAYKTLFELGALTADN--SSGYVTKLGRDMTRLPMDVSLSAVLLRAR 480 Query: 511 KHGCVREAMIITSALSIQDPRERPMD--KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 G ++ A+I+ SALSIQDPR P D ++ + HR+F +SDFL +V++WN Sbjct: 481 DLGVLQPALIVCSALSIQDPRVVPNDEPERTRIRQLHRKFCGHKSDFLVYVSMWNAFCTD 540 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY---REIHIA 625 S N R+ C + +++LR+REW D+Y Q ++++ + P + +HIA Sbjct: 541 WDGKSWNKLRKFCDKNSMHFLRLREWVDLYEQFSRILE-VKFENKVCPFDSFHRDNLHIA 599 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 LL+G L I +D + Y +FPGS L+ K +W+ AE+ ETSR + AA Sbjct: 600 LLSGFLGGIAHRDIENGCYRLVSGRETHVFPGSDLYAKSVEWLFSAEVRETSRTFLTKAA 659 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 I PEW+ VA+ R + EP W + +G V A E+V+ GL I +V+Y++++P C Sbjct: 660 EIKPEWILQVAEPFCTRRWFEPTWNKERGFVEAVEEVSFRGLVISRGHRVDYARVNPEDC 719 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 ++F R A+V G+ F + N + + LE + R+ + ++ L E+Y RI+ Sbjct: 720 AQIFWREAVVMGEVARPFDFMKHNDHVVENLHALEARKRQFGLAPSEDALVEYY-TRIAG 778 Query: 806 DVISARHF--------DSWWKKVSRETPDLLNFE------------------KSMLIKEG 839 +V S + D + K + DLL+ L K+ Sbjct: 779 NVNSIKTLKSYIYEHTDQFLKFDEKYWLDLLDERTLAGSLQTKDERGFGTKLSDFLPKQS 838 Query: 840 AEKISKLDYP---------NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESG 890 ++ P + G + F+ D DG+T+ +P LL ++ + Sbjct: 839 QTSKARSADPIAPTLGGSIEHFRIGERVVTGEMVFDATRDCDGITLSLPYDLLTEISPAK 898 Query: 891 FEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA--EAFLGRVK--PLELPLL---DSL 943 F I R ++ ++I+ +PK V + + A A + F + P + PLL + L Sbjct: 899 FAMSIQQWREWMIESVIREMPKSV-KKLLEAKRTAIDDEFFAALDNFPHKAPLLLLYEVL 957 Query: 944 E--RELRR-MTGVTVDREDWHWDQVPDHLKITFRV 975 +E+R G ++D + D+ +HL++ V Sbjct: 958 SNTKEIRSGANGASIDVPTVNPDK-ENHLRLHLVV 991 >UniRef50_B6ADS3 DHX8/prp22-type ATP-dependent RNA helicase, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6ADS3_9CRYT Length = 1078 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 234/642 (36%), Positives = 367/642 (57%), Gaps = 29/642 (4%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQP 130 NLP+ ++ +++A+R +Q+++V GETGSGKTTQ+ + E G G +IG TQP Sbjct: 418 EQRRNLPIFALRESLVDAVRKNQIIVVIGETGSGKTTQITQYLYEEGFCDDGNMIGCTQP 477 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA +VA R+A+E+ G +G+ +RF D S T +K MTDG+LL E D L + Sbjct: 478 RRVAATSVARRVAQEVGCTIGSTVGFSIRFEDVTSSETRIKYMTDGMLLREALSDHSLSK 537 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y+ I++DEAHER++ D L G LK RP ++I+TSAT++ ++FSR+F N I + Sbjct: 538 YNVIMLDEAHERTITTDVLFGLLKATCIERPSFRLIVTSATLEADKFSRYFMNCNIFAIP 597 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADA 309 GRT+PVE+ Y + E D ++A V ++ +E GDIL+F++G+ EI + Sbjct: 598 GRTFPVEILY------TREPESDYVEAALLTVLQIHLREPPGDILVFLTGQEEIDNACRT 651 Query: 310 LNK-------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGI 360 L++ LN ILP+Y+ + Q+ +F+ R+ V+ATN+AE SLT+ GI Sbjct: 652 LHERMQKLENLNPPPLIILPVYSSQPSEVQSLIFEPTPEGCRKCVIATNIAEASLTIDGI 711 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-S 419 +VIDPG A++ ++ +T + L + PISQASA QR GR GR G C RLY+E F Sbjct: 712 YFVIDPGFAKMMVFNSKTGMDSLVVAPISQASARQRSGRAGRTGPGKCYRLYTEIAFKTE 771 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 T PEI RTNL++ +L + ALG+ D+ F F++ P + + L EL A+ + Sbjct: 772 MLPVTIPEIQRTNLSNTVLLLKALGINDLLNFDFMDPPPPHTLLIALETLYELDALDDNG 831 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 LT LGR++++LP+ P L++MVL + GC E + ITS LS+Q+ RP DKQ Sbjct: 832 -----ILTRLGRKMAELPMSPNLSKMVLSSVDLGCSDEIITITSMLSVQNVFYRPKDKQA 886 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 A+D +FH D L ++N++N Q+ ++ C ++L +++ QD+ Sbjct: 887 AADRHKSKFHHSYGDHLTYLNIYNSWQRQRYSVP------WCYENFLQSRSLKKAQDVRK 940 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 QL + + + + S +Y +I A+ G SH KD+ + + N + + P S Sbjct: 941 QLISIFDKYQLNIISARNDYDKIRKAICAGFFSHACKKDSQEGYRSLVDNQQVYLHPSST 1000 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 LF K P+W++ ELV T++ + R I P W+ +A +L + Sbjct: 1001 LFNKSPEWLLYHELVFTTKEYIRDCCTIQPNWLVELAPNLFQ 1042 >UniRef50_C0NP73 ATP-dependent RNA helicase DHX8 n=10 Tax=Dikarya RepID=C0NP73_AJECG Length = 1266 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 239/710 (33%), Positives = 374/710 (52%), Gaps = 33/710 (4%) Query: 3 EQQKLTFTALQQRLDSLMLR-DRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 ++ L + M+ + +F+ L + K D K + Q+ + Sbjct: 532 AAEQAAGVDLNAQWHDPMVAPEERKFAADLRNAQVTKTTDTLPEW-----KRVTQSKDQS 586 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 + ++LPV + ++ +LEA+ ++Q++IV G+TGSGKTTQL + E G Sbjct: 587 YGKRTNMTMKQQRESLPVFKFRKQLLEAVTENQLLIVVGDTGSGKTTQLTQYLAEGGFAN 646 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G+IG TQPRR+AA +VA R++EE+ G +GY +RF D S T +K MTDGIL E Sbjct: 647 NGIIGCTQPRRVAAVSVAKRVSEEVGCRLGAEVGYTIRFEDCTSPETKIKYMTDGILQRE 706 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 I D L +Y I++DEAHER+++ D L G LK+ + RRPDLKII+TSAT+D ++FS +F Sbjct: 707 ILLDPDLKKYSVIMLDEAHERTISTDVLFGLLKKTIQRRPDLKIIVTSATLDADKFSEYF 766 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGE 300 N PI + GRTYPVE+ Y + E D L A V ++ E GDIL+F++G+ Sbjct: 767 NMCPIFSIPGRTYPVEIMYS------REPESDYLDAALVTVMQIHLTEPAGDILLFLTGQ 820 Query: 301 REIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAE 352 EI + L + ++ ILP+Y+ L + Q+R+F+ R++V+ATN+AE Sbjct: 821 EEIDTACEILYERMKALGPSVPELIILPVYSALPSEMQSRIFEPAPPGSRKVVIATNIAE 880 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TS+T+ I YV+DPG + + Y + + L + PISQA A QR GR GR G C RLY Sbjct: 881 TSITIDQIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRSGRAGRTGPGKCFRLY 940 Query: 413 SEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 +E + S T PEI R NL+ IL + A+G+ D+ F F++ P + + L Sbjct: 941 TEAAYQSEMLPTTIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYA 1000 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 L A+ + LT LGR+++ P++P LA++++ + + GC E + I + LS+ Sbjct: 1001 LSALDDEGL-----LTRLGRKMADFPMEPALAKVLIASVEMGCSDEMLSIVAMLSVHSIF 1055 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 RP +KQQ +D+K +FHD D L +N++N +S C +++ ++ Sbjct: 1056 YRPKEKQQQADQKKAKFHDPHGDHLTLLNVYNGW------KNSRFSSPWCFENFIQARQM 1109 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 R QD+ QL +++ V S + AL +G + KD + T Sbjct: 1110 RRVQDVREQLVTIMERYKHKVVSCGRNTTRVRQALCSGFFRNAARKDPQEGYKTLIEGTP 1169 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + P S LF K + V+ LV T++ + I+P+W+ A K Sbjct: 1170 VYMHPSSALFGKAAEHVIFHTLVLTTKEYMHCTTSIEPKWLVEAAPTFFK 1219 >UniRef50_C4QEZ9 ATP-dependent RNA Helicase, putative n=21 Tax=Eukaryota RepID=C4QEZ9_SCHMA Length = 1569 Score = 848 bits (2192), Expect = 0.0, Method: Composition-based stats. Identities = 235/655 (35%), Positives = 364/655 (55%), Gaps = 31/655 (4%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 ++ R + LP+ + K ++++A+ D++V+IV GETGSGKTTQ+ + E G G Sbjct: 895 KKIVRSILEQRQALPIFRLKDELMKAVNDNKVLIVIGETGSGKTTQITQYLAEAGYVNTG 954 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 IG TQPRR+AA +VA R++EE G +GY +RF D + T +K MTDG+LL E Sbjct: 955 RIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTAPETKIKYMTDGMLLRECL 1014 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L QY I++DEAHER+++ D L G LK+ + +R D+K+I+TSAT+D +FS++F Sbjct: 1015 IDPDLRQYSVIMLDEAHERTIHTDVLFGLLKKAIQKRDDMKLIVTSATLDSVKFSQYFFE 1074 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGERE 302 API + GRTYPVE+ Y + E D L A + V ++ E GDIL+F++G+ E Sbjct: 1075 APIFTIPGRTYPVEILYSL------EPENDYLDAALNTVMQIHLTEPPGDILVFLTGQEE 1128 Query: 303 IRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETS 354 I + L + + ILP+YA L + Q+R+F R++V+ATN+AETS Sbjct: 1129 IDSGCELLYERMKALGSEVPELIILPVYAALPSEMQSRIFDPAPPGSRKVVIATNIAETS 1188 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LT+ GI YVIDPG + YS ++ + +L + PISQA A QR GR GR G C RLY+E Sbjct: 1189 LTIDGIYYVIDPGFVKQKVYSSKSGMDQLIVTPISQAQAKQRAGRAGRTGPGKCYRLYTE 1248 Query: 415 DDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 + PEI RTNLAS +LQ+ A+G+ D+ +F F++ P + + + L L Sbjct: 1249 RAYRDEMLATNVPEIQRTNLASTVLQLKAMGINDLLSFDFMDPPPLQTLVAAMETLHGLS 1308 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ + LT LGR++++ P++P L++M++ + C E + + S LS+Q+ R Sbjct: 1309 ALDDEGL-----LTRLGRRMAEFPLEPMLSKMLIMSVHLQCSEEVLTVVSMLSVQNVFYR 1363 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTDYLNYLRVR 592 P +K + +D++ +FH E D L + ++N +N F C ++L ++ Sbjct: 1364 PKEKTELADQRKAKFHQPEGDHLTLLAVYNAW-------KNNKFSAPWCYDNFLQARTLK 1416 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 QD+ QL ++ + V S + A+L+G + KD + T Sbjct: 1417 RAQDVRKQLLGIMDRHKLDVVSCGKKTALAQKAILSGFFRNAAKKDPQEGYRTLVDQQVV 1476 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 I P S LF + P WV+ ELV T++ + R IDP W+ A + K + +P Sbjct: 1477 YIHPSSALFNRQPDWVVYHELVMTTKEYMREVTTIDPRWLVEFAPNFFK--FGDP 1529 >UniRef50_A7AWE8 RNA helicase, putative n=2 Tax=Piroplasmida RepID=A7AWE8_BABBO Length = 1156 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 234/692 (33%), Positives = 367/692 (53%), Gaps = 37/692 (5%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 S+ + ++++ ++ + + A + ++LP+ + ++L Sbjct: 454 SQFMEELRRMNMKQRREGALHDKRD----PGTRKDGHNAIKTIQEQRESLPIFALRDELL 509 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGR-----GIKGLIGHTQPRRLAARTVANRI 142 +A++++ ++IV GETGSGK+TQ+P+ E G G +IG TQPRR+AA +VA R+ Sbjct: 510 QAVQENDILIVVGETGSGKSTQIPQYLAESGYTSGSDGESMVIGCTQPRRVAAMSVAKRV 569 Query: 143 AEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202 +EE+ G +GY +RF D + +T++K MTDG+LL E+ QD LL QY I++DEAHER Sbjct: 570 SEEVGCRLGQEVGYCIRFEDCTTKDTVIKFMTDGMLLREVLQDPLLEQYACIMLDEAHER 629 Query: 203 SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP 262 ++ D L LK +R + K+I+TSAT++ E+FS +FN+A I + GR +PVE+ + Sbjct: 630 TIATDVLFALLKNCCSKRENFKLIVTSATLEAEKFSTYFNDASIFSIPGRMFPVEILH-- 687 Query: 263 IVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTAD-------ALNKLN 314 D E D ++A V + E GDIL+F++G+ EI L ++ Sbjct: 688 ----TTDQESDYMEASLITVLNIHLNEPAGDILLFLTGQEEIDVACRTLHERMKRLESMS 743 Query: 315 LRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 ILP+YA L Q +F+ R+ V+ATN+AE SLT+ GI YVIDPG A++ Sbjct: 744 PPPLIILPVYAALPGEMQGAIFEPTPPGCRKCVIATNIAEASLTIDGIFYVIDPGFAKVK 803 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRT 431 RY+ RT ++ L + PISQASA QR GR GR G C RLY+ED + S PEI RT Sbjct: 804 RYNPRTGMESLVVVPISQASAKQRAGRAGRTGPGKCYRLYTEDAYRSEMLPTAVPEIQRT 863 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491 NLA+V++ + A+G+ D F F++ P + D + L LGA+ + LT LGR Sbjct: 864 NLANVVILLKAMGINDFLNFDFMDKPPVETLIDALDNLYHLGALDDEGL-----LTRLGR 918 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 ++++ P+DP LA+M+L + C E + I S LSIQ+ RP DKQ +D RF Sbjct: 919 KMAEFPMDPNLAKMLLTSVDLECSDEVITIVSMLSIQNIFYRPQDKQAEADRAKSRFTQA 978 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 E D L + ++N + C ++L + QD+ QL ++ Sbjct: 979 EGDHLTLLYVYNQWR------KNKFSSVWCHENFLQSRALLRAQDVRKQLISIMDRYRFK 1032 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVA 671 V S I ++ G H +D + T I P S L+ + P++V+ Sbjct: 1033 VVSCGNNAEVISKSVCAGYFHHSARRDPQEGYRTIVDQQNVFIHPSSALYNRSPEYVVYH 1092 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 ELV T++ + R + +W+ +A + KR+ Sbjct: 1093 ELVMTTKEYMRDLTIVKAQWLLELAPSMFKRS 1124 >UniRef50_Q54MH3 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=5 Tax=Eukaryota RepID=DHX16_DICDI Length = 1106 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 242/680 (35%), Positives = 380/680 (55%), Gaps = 35/680 (5%) Query: 40 PDAQQAIFQEMAKEIDQAAGKVLLR-------EAARPEITYPDNLPVSQKKQDILEAIRD 92 D + I +E+ K+ + G ++L+ +A +LPV ++ +++A+R+ Sbjct: 423 EDQIEFIKEEVLKQGQKGDGVMILKPGDDGSAQAKMTIQEVRKSLPVYPYREQLIDAVRE 482 Query: 93 HQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGG 152 +QV+I+ GETGSGKTTQ+P+ E G G IG TQPRR+AA +VA R+AEE+ + G Sbjct: 483 YQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGN 542 Query: 153 CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGY 212 +GY +RF D S T+++ MTDG+L+ E L Y +IIDEAHER+L+ D L G Sbjct: 543 EVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGL 602 Query: 213 LKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTER 272 LK++ RPDLK++I+SAT+D ERFS +F+ AP + GR Y V Y E Sbjct: 603 LKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHY------TQAPEA 656 Query: 273 DQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYA 325 D L A V ++ E GDIL+F++G+ E+ A+ L ++ I +Y+ Sbjct: 657 DYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYS 716 Query: 326 RLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383 L Q ++F+ + R++VLATN+AETSLT+ GI YVIDPG + ++ RT ++ L Sbjct: 717 TLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESL 776 Query: 384 PIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTA 442 I P+S+ASANQRKGR GRV+ G C RL++ F + E T PEI RTNL +V+L + + Sbjct: 777 VITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKS 836 Query: 443 LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502 +G+ D+ F F++ P + + + L LGA+ Q LT LGR++++ PVDP+L Sbjct: 837 MGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQ-----LTKLGRKMAEFPVDPQL 891 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDEKHRRFHDKESDFLAFVNL 561 ++M++ ++K+ C E + I + LS+ + RP DK A+D + F + D L +N+ Sbjct: 892 SKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFHPQGDHLTLMNV 951 Query: 562 WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE 621 +N E S + C +++ + ++ QD+ QL +++ + IP+ S + Sbjct: 952 FNQWRE------SGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDS 1005 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 I + +G + + T N I P S LF+ PPKWV+ ELV T++ + Sbjct: 1006 IRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTKEFM 1065 Query: 682 RIAARIDPEWVEPVAQHLIK 701 R I W+ +A H+ K Sbjct: 1066 RQIVEIQSSWLHEIAPHIYK 1085 >UniRef50_O22899 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=8 Tax=Eukaryota RepID=DHX15_ARATH Length = 729 Score = 840 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 235/671 (35%), Positives = 372/671 (55%), Gaps = 46/671 (6%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL------GRGIKGL 124 + +LPV +K D L + +Q +I+ GETGSGKTTQ+P+ ++ +G K L Sbjct: 59 LEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWL 118 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 +G TQPRR+AA +V+ R+A+E+ G +GY +RF D S TM+K +TDG+LL E Sbjct: 119 VGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMA 178 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 D LL +Y II+DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F+ A Sbjct: 179 DPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGA 238 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREI 303 P+++V GR +PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI Sbjct: 239 PLMKVPGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEI 292 Query: 304 RDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQS---------HSGRRIVLAT 348 D +NK + +++PLY+ L + Q ++F +GR+IV++T Sbjct: 293 EDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVST 352 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLT+ GI YVIDPG A+ Y+ R +V+ L + PIS+ASA+QR GR GR G C Sbjct: 353 NIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKC 412 Query: 409 IRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 RLY+E F + T PEILR+NLA+ +L + LG+ D+ F F++ P + + Sbjct: 413 FRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALE 472 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 +L LGA+ + LT G +S+ P+DP++++M++ + + C E + +++ LS+ Sbjct: 473 VLNYLGALDDEGN-----LTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSV 527 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 + RP + Q+A+DE RF + D L +N+++ + +N C +++N Sbjct: 528 PNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ------NNEDPNWCFENFVN 581 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMKDADKQE 643 ++ ++ QL +++ + + S Y I A+L G + + Sbjct: 582 NRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHY 641 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 T N + P + L K P+WV+ E V T+R + R I EW+ VAQH + Sbjct: 642 LTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLS 700 Query: 704 YSEPHWERAQG 714 P+ E + Sbjct: 701 NF-PNCEAKRA 710 >UniRef50_C5KUX0 ATP-dependent RNA helicase DHX8, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUX0_9ALVE Length = 1239 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 244/747 (32%), Positives = 409/747 (54%), Gaps = 55/747 (7%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++++ + A+Q+++ + +D + + NP + + + I + Sbjct: 502 LAQERRESKQAMQEQVIKAIPKD-------MSRPWEDPNPHQGERTLAQNLRSITMNSAS 554 Query: 61 VLL-------------REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 + +A P + LP+ + + +L+A+ ++QV+IV GETGSGKT Sbjct: 555 QNQIRKHGAPTGVAYGQRSALPMREQREGLPIFKLRSQLLQAMAENQVLIVIGETGSGKT 614 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+ + E G G+IG TQPRR+AA TVA R+AEE G +GY +RF DH S Sbjct: 615 TQMTQYMAEAGYADHGIIGCTQPRRVAAITVAKRVAEEYGCRLGQEVGYTIRFEDHTSPE 674 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 T +K MTDG+LL E D LL +Y I++DEAHER+++ D L G KE + R DLK+I+ Sbjct: 675 TRIKYMTDGMLLREALADPLLKKYSVIMLDEAHERTIHTDVLFGLCKEAIRERNDLKLIV 734 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS- 286 TSAT+D E+FSR+F ++ I + GRT+PVE+ Y ++ E D +QA V ++ Sbjct: 735 TSATLDAEKFSRYFFDSHIFTIPGRTFPVEILYS------NEPEEDYVQAALMTVMQIHL 788 Query: 287 QESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPL--YARLSNSEQNRVFQ-- 337 E GDIL+F++G+ EI L++ + ++P+ YA + Q+ +F+ Sbjct: 789 TEQPGDILVFLTGQEEIDTACQLLDERMAQLAPMNPPPLIPMGVYAAQPSEVQSSIFEPA 848 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 R+ V+ATN+AE S+T+ GI +V+DPG A+I ++ +T++ L + PISQA+A QR Sbjct: 849 PPGSRKCVVATNIAEASITIDGIYFVVDPGFAKIKTFNAKTQMDALIVTPISQANARQRA 908 Query: 398 GRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GR G C RLY+E F PEI R+NL++V+L + A+G+ D+ F F++A Sbjct: 909 GRAGRTGPGKCYRLYTEKAFRTEMLPSAVPEIQRSNLSNVVLTLKAMGINDLLGFDFMDA 968 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 P + + + + L +LGA+ + LT LGR++++ P+ P ++M+L + GC Sbjct: 969 PPVQTLINSLEALWQLGALDDEGL-----LTKLGRKMAEFPMPPEQSKMLLASVDLGCAD 1023 Query: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA 576 EA+ + + LS+Q+ RP DKQ +D+K +F+ E D + + ++ KA S N Sbjct: 1024 EAITVVAMLSVQNVFYRPKDKQAVADQKKSKFNSPEGDHVTLLEVY-------KAWSRNR 1076 Query: 577 FRR-LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 635 F C +++ +R+ QD+ QL ++ + +NS +Y + A+ G +++ Sbjct: 1077 FSAPWCYENFIQVRSLRKAQDVRKQLIGIMDRYRLEINSCGQDYNRLRQAIAAGYFNNLC 1136 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 +D ++ + I P S L++K P+WV+ ELV T+R + R ++PEW+ + Sbjct: 1137 RRDPNEGYRVMRDLQQVYIHPSSALYQKNPEWVIYYELVMTTREYIREVCTVEPEWMPKI 1196 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKV 722 A ++ K+ R + A EK+ Sbjct: 1197 APNMFKQA-----DNRGISRMKANEKI 1218 >UniRef50_C4M6S9 Helicase, putative n=3 Tax=Entamoeba RepID=C4M6S9_ENTHI Length = 953 Score = 836 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 235/674 (34%), Positives = 388/674 (57%), Gaps = 34/674 (5%) Query: 40 PDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA 99 P ++ E +E K + E + LP+ + ++E+I+ +Q++I+ Sbjct: 263 PKDKERKEWEQREEKATKEYKKSIEEKRK-------ELPIYSMRNKLMESIKKNQIIILI 315 Query: 100 GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVR 159 GETG GKTTQL + E G G IG TQPRR+AA +V+ R+AEE+K + G +GY +R Sbjct: 316 GETGCGKTTQLTQYLDEDGYSKNGRIGCTQPRRVAAISVSQRVAEEMKVKLGEEVGYSIR 375 Query: 160 FSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR 219 F D ++ T +K MT+G+LL E DR L QY +I+DEAHER++ ID L G LKE + R Sbjct: 376 FEDKTTEKTRIKYMTNGMLLREYLVDRDLPQYKVLILDEAHERTVGIDILFGLLKETIKR 435 Query: 220 RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIF 279 RP+ K+IITSAT+D ++FS +FN APII + GRT+PVE Y ++ E D +Q+ Sbjct: 436 RPEFKLIITSATLDADKFSIYFNKAPIIHIPGRTFPVEKLYL------EEPEMDYIQSGI 489 Query: 280 DAVDELS-QESHGDILIFMSGEREIRDTA----DALNKLNLRHTEI--LPLYARLSNSEQ 332 + + ++ + GDIL F++G+ EI T + + KL+ R+ ++ LP+YA LS +Q Sbjct: 490 ETIMKIHLTQPPGDILFFLTGQEEIDSTCSIINEKVQKLDKRYPKLIALPIYASLSTEQQ 549 Query: 333 NRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 R+F+ R+ ++ATN+AETS+T+ GI +V+D G + ++ R + +L I PISQ Sbjct: 550 KRIFEPAPPFTRKCIVATNIAETSITIDGIYFVVDSGFVKQKVHNPRLGMDQLLITPISQ 609 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIA 449 A A+QR GR GR G C RLY+E +L+ P + PEI R NLA +L + A+G+ ++ Sbjct: 610 ACADQRAGRAGRTGPGKCYRLYTEKAYLNEMPIVSIPEIQRANLADTVLILKAIGINNVI 669 Query: 450 AFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA 509 F +++ P + + L + A+ D KLT LGR++++ P++P LA+M++ + Sbjct: 670 DFDYMDPPMHNTLISALHHLYAISALDDDG-----KLTQLGRKMAEFPLEPPLAKMLIVS 724 Query: 510 QKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQ 569 ++ GC E + I +ALS+ + RP +K++ +D + R+ D L + ++N + Sbjct: 725 EQFGCSEEVVTIVAALSVGNLFIRPKEKEEEADRRKRQLSSSAGDHLTMLQVYNNWIKNG 784 Query: 570 KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTG 629 K+ S C+ +Y+N+ + + +DI QL +++K+ I + S I ++++G Sbjct: 785 KSPS------WCKENYINFRSLYKCEDIRKQLIKIMKKYHIQLISSHNNPIPIIKSIVSG 838 Query: 630 LLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDP 689 H +D + T + I P S LF + P+WV+ ELV T++ + R IDP Sbjct: 839 FFVHAAKRDPQEGYRTLVDGQQVFIHPTSSLFGRNPEWVVYHELVLTTKEYMREIIAIDP 898 Query: 690 EWVEPVAQHLIKRT 703 +W+ +A +++ Sbjct: 899 QWLIELAPAFYQKS 912 >UniRef50_B2ANS3 Predicted CDS Pa_6_9920 n=3 Tax=Saccharomyceta RepID=B2ANS3_PODAN Length = 1151 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 225/676 (33%), Positives = 353/676 (52%), Gaps = 44/676 (6%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 ++ + A+ E + + R + ++LPV ++ ++ A+R++Q Sbjct: 463 RRAQATQAESDSVPEWKRAVVPKDQPTGKRSDMTIK-EQRESLPVFAFREQLINAVRENQ 521 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 V+IV GETGSGKTTQL + E G G+IG TQPRR+AA +VA R++EE+ G + Sbjct: 522 VLIVVGETGSGKTTQLTQYLAEAGFTNNGIIGCTQPRRVAAVSVAKRVSEEVGCRLGEEV 581 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D S T +K MTDG+L EI D L +Y I++DEAHER++ D L LK Sbjct: 582 GYTIRFEDVTSPATKIKYMTDGMLEREILIDPELGRYSVIMLDEAHERTIATDVLFALLK 641 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 + + R DLK+I+TSAT+D ++FS +FN PI + GRT+PVE+ Y Sbjct: 642 KTMKSRKDLKVIVTSATLDADKFSEYFNACPIFTIPGRTFPVEILYSREP---------- 691 Query: 275 LQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLS 328 E GDIL+F++G+ EI + + L + ++ ILP+Y+ L Sbjct: 692 -------------EPMGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALP 738 Query: 329 NSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 + Q+R+F R++V+ATN+AETS+T+ I YVIDPG + + Y + + L + Sbjct: 739 SEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVIDPGFVKQNAYDPKLGMDSLIVT 798 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGL 445 PISQA ANQR GR GR G C RLY+E + S T PEI R NL++ IL + A+G+ Sbjct: 799 PISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSNTILMLKAMGI 858 Query: 446 GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARM 505 D+ F F++ P + + L LGA+ + LT LGR+++ P++P L+++ Sbjct: 859 NDLIRFDFMDPPPVNTMLTALEELYALGALDDEGL-----LTRLGRKMADFPMEPSLSKV 913 Query: 506 VLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL 565 ++ + GC E + I + L++ RP DKQ +D+K +FHD D L +N++N Sbjct: 914 LISSVDKGCSDEVVSIVAMLNLSTIFYRPKDKQNQADQKKAKFHDPHGDHLTLLNVYNSW 973 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIA 625 + C +++ +R +D+ Q+ +++ P+ S E + A Sbjct: 974 ------KNHGFSPTWCHENFIQARSMRRAKDVRDQIVKIMNRHRHPIVSCGRETDRVRQA 1027 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 L +G + KD + T + P S LF K +WV+ LV T+R + Sbjct: 1028 LCSGFFRNTARKDPQEGYKTLTEGTPVYLHPSSALFGKQAEWVIYHTLVLTTREYMHFTT 1087 Query: 686 RIDPEWVEPVAQHLIK 701 I+P+W+ A K Sbjct: 1088 AIEPKWLIDAAPTFFK 1103 >UniRef50_A9C368 ATP-dependent helicase HrpA n=13 Tax=cellular organisms RepID=A9C368_DELAS Length = 1391 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 277/784 (35%), Positives = 418/784 (53%), Gaps = 55/784 (7%) Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIA 625 E LS+ + +L R +++N RVREW+DI++QL VV E +N+EPA Y +H++ Sbjct: 612 DEPSHKLSNRQWEQLLRQNFINIRRVREWRDIHSQLLTVVNEHKWKINTEPAGYDAVHLS 671 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 +L+GLL ++G K + Y GAR RF PG+ L KKP +W++ AELVETSRL+GR A Sbjct: 672 MLSGLLGNLGYKGDESDAYLGARGIRFYPHPGAHLSKKPGRWIVAAELVETSRLYGRGIA 731 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 IDP+W+E V HL+K+ +PHW + Q V+A E+ T+YGL + R+++Y +IDP Sbjct: 732 AIDPQWLEEVGAHLLKKQLLDPHWSKNQADVVALERATLYGLVVYNGRRMSYGRIDPQSA 791 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 RE+FIR ALVEG W TR F NLKL +VEELEHKSRR+D+LVDDE ++ FYDQ+I Sbjct: 792 REIFIRQALVEGQWDTRWHFLPANLKLVRKVEELEHKSRRQDVLVDDELIYAFYDQQIPK 851 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 DV S FD W+++ ++E DLL + L++ A I+ +P G + SY Sbjct: 852 DVFSGATFDHWFREAAKENADLLRLSRDELMRHEAAGITTQAFPKVVKLGGVDCTASYLH 911 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 PG DG+TV +PL +LNQV + EW +PG+ ++ + AL+KSLP+ R FVP P A Sbjct: 912 SPGDARDGITVTVPLFVLNQVSDERVEWLVPGMLKDKLQALLKSLPQRPRSRFVPLPESA 971 Query: 926 EAFLGRV----KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNK 981 + + + L+D+L +++R T + V R D+ D + HL + FR+ D+ + Sbjct: 972 QRLAELFTTPERWGQGSLIDALLKQVRDETSLDVKRADFKLDMLSPHLFMNFRITDEHGR 1031 Query: 982 KLKEGRSLQDLKDALKGKVQETLSAVAD-------------------------------- 1009 +L +GR+L LK L K + A+A Sbjct: 1032 QLGQGRNLGALKAELGAKARGAFQALAALKVASVTEAPAPAANAATAPETGRKPAPAAKA 1091 Query: 1010 --------------DGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKL 1055 S WSFG+LPE E RG + +PAL+D D+V I++ Sbjct: 1092 EKPDQATPARNAKPSQPADSRYKEWSFGELPELMEIGRGGQTLIGFPALIDHGDAVGIEV 1151 Query: 1056 FDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISC 1115 FD P GLRRL L I +KYL + +P+ K+ + + P G EL + I Sbjct: 1152 FDEPEVAAARHRVGLRRLFALQIRDALKYLEKNIPDLQKMAVAYMPLGTQEELREQIIDV 1211 Query: 1116 GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 +D+ P F + R L ++A+ IL +++K + Sbjct: 1212 AIDRAFLQEPLPTND-AQFKQRVQDGRGRLTLIANEVARMASTILVEYAAAQRKIKDTKN 1270 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 +D Q+ LV + F+ + +L RYL+AI RL+K DP RD +++ Sbjct: 1271 AP--DATADAAQQLQRLVPKNFIAAAPWTQLQHYARYLKAITSRLDKYRADPARDASRLT 1328 Query: 1236 KVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 ++ ++Q + + + + D ++E RWM+EELRVS+FAQ+L TPYP+S KR+ + Sbjct: 1329 ELRPLEQRYWRLVAER--KGHIDARMQEYRWMLEELRVSFFAQELRTPYPVSIKRLDKVW 1386 Query: 1296 EQIS 1299 +Q+ Sbjct: 1387 QQLQ 1390 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 313/532 (58%), Positives = 398/532 (74%), Gaps = 30/532 (5%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG------ 123 +I++P++LPVS ++++I+EA+ HQV+IV GETGSGKTTQLPKI + LGRG Sbjct: 36 KISFPESLPVSARREEIMEAMDRHQVIIVCGETGSGKTTQLPKIALALGRGKVNATPDDK 95 Query: 124 ------LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 LIGHTQPRR+AA +VA RIAEEL T G +GYKVRF D +S + VKLMTDGI Sbjct: 96 GQVRGHLIGHTQPRRIAASSVAKRIAEELNTPLGDVVGYKVRFQDRLSKDASVKLMTDGI 155 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE Q D LL YDT+IIDEAHERSLNIDFLLGY+K++LPRRPDLK+++TSATID ERF Sbjct: 156 LLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYIKQILPRRPDLKVVVTSATIDAERF 215 Query: 238 SRHF----NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES-HGD 292 SRHF AP+I VSGRTYPVE+R+RP E+ D D AI + VDEL GD Sbjct: 216 SRHFEGPKGPAPVIMVSGRTYPVEMRWRPFEEKRDH---DLNDAIAEGVDELWAGGVSGD 272 Query: 293 ILIFMSGEREIRDTADALNKLN-----LRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 IL+F+ GEREIR+ AD L K LRH E+LPL++RLS +EQ+R+F SH+GRRIVLA Sbjct: 273 ILVFLPGEREIREAADHLRKHLAQQPVLRHAEVLPLFSRLSQAEQDRIFDSHTGRRIVLA 332 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPGI+YVID GTAR+ RYS+R+KV++L +EPISQA+ANQR GRCGRV+ GI Sbjct: 333 TNVAETSLTVPGIRYVIDAGTARVKRYSFRSKVEQLLVEPISQAAANQRAGRCGRVANGI 392 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLY E DF +R FTDPEILR++LA VIL+M +LGLGD+ FPF+EAP R I DG + Sbjct: 393 CIRLYDEADFGTRARFTDPEILRSSLAGVILRMKSLGLGDVVNFPFLEAPSGRAIADGYQ 452 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL ELGA+ +L P+GR+LS+LP+DPR+ RM+LEA+ G V E ++I SALS+ Sbjct: 453 LLGELGAVDE-----RGELLPMGRELSRLPLDPRVGRMILEARTRGAVAEVLVIASALSV 507 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR 579 QD R+RP++ QQ +D++H +F D++S+F ++ LW +L + + R+ Sbjct: 508 QDVRDRPLEAQQQADQQHAKFDDEKSEFSGYLRLWKWLQDARGGKVVAKSRK 559 >UniRef50_A0D4B2 Chromosome undetermined scaffold_37, whole genome shotgun sequence n=4 Tax=Oligohymenophorea RepID=A0D4B2_PARTE Length = 1059 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 231/702 (32%), Positives = 380/702 (54%), Gaps = 38/702 (5%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPD-----AQQAIFQEMAKEIDQAAGKVLLREAAR 68 ++ +M DR + + + + N D + +Q + + Q + + Sbjct: 255 SKMGKVMNLDR---KKEMDPDRHLLNEDGDYDFKASSRYQTALQRVTQGQSDFARNKTIK 311 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 + Y LPV + ++++ + D++V I+ GETGSGKTTQL + E G G+IG T Sbjct: 312 EQREY---LPVFHCRSELVQLLHDNRVCIIVGETGSGKTTQLTQYLYEEGYTNTGVIGCT 368 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA +VA R+AEE+ E G +GY +RF D+ S +T++K MTDG+LL E QD L Sbjct: 369 QPRRVAAVSVAKRVAEEMGVELGSKVGYAIRFEDYTSKDTVIKYMTDGVLLRESLQDPDL 428 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 +Y +I+DEAHERSLN D L G LK++ RR D++I+ITSAT++ ++FS F PI + Sbjct: 429 EKYSAVIMDEAHERSLNTDVLFGILKKVAQRRRDIRIVITSATMNAKKFSDFFGGVPIYK 488 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDTA 307 + GRT+PV+VR+ + D ++ AI ++ Q+ GD+LIFM+G+ +I T Sbjct: 489 IPGRTFPVDVRFEKAPAQ------DYVRSAIKKTIEVHIQQPPGDVLIFMTGQEDIETTC 542 Query: 308 DALNK------LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 L + ILP+Y++L + EQ R+F+ R+ ++ATN+AETSLT+ G+K Sbjct: 543 YLLAEELNKLSEATPPLLILPIYSQLRSEEQARIFEKSEFRKCIVATNIAETSLTLDGVK 602 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-R 420 YVID G ++ Y+ R + L + PISQA+A+QRKGR GR GIC RLYS ++ Sbjct: 603 YVIDTGYCKMKVYNPRIGMDALQVTPISQANADQRKGRAGRTGPGICFRLYSSLNYRQDM 662 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 E PEI RTNLA+V+L + +L + ++ F F++ P + I + + L LGA+ Sbjct: 663 LENNIPEIQRTNLANVVLLLKSLNINNLLDFDFMDPPPQDTILNAMYQLWVLGALD---- 718 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 + +LT LGR++S+ P+DP L++M+++ + GC E + + S LS+ RP D++ Sbjct: 719 -NVGELTELGRKMSEFPLDPPLSKMLIKGDQLGCTEEILTVVSMLSVPGIFYRPKDREAE 777 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 SD + ESD L +N++ + C ++ +R+ +++ Q Sbjct: 778 SDAAREKLFVGESDHLTMLNVFEQWKRHE------FSPEWCNEHFVQAKSMRKVREVRAQ 831 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L+ + +LG+ +++ Y + A+ + + + P S L Sbjct: 832 LKDIAGKLGLKMSTCNFSYDVVRKAICSAYFQNAAKIKGVGDYINLRTGMPCKLHPSSAL 891 Query: 661 F--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 + P +V+ ELV TS+ + + +DP+W+ + Sbjct: 892 YSLGYAPDYVVYHELVMTSKEYMHCVSAVDPQWLAEMGPMFF 933 >UniRef50_C4QXH4 DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase n=1 Tax=Pichia pastoris GS115 RepID=C4QXH4_PICPG Length = 1005 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 231/700 (33%), Positives = 382/700 (54%), Gaps = 34/700 (4%) Query: 27 FSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDI 86 + +KK P+ + E I + + + + ++LPV KQ + Sbjct: 305 LLKERKELKKGLRPEISNKV-SEWKDSIKKDSYGKTTTKNLQ---EQRESLPVFSMKQML 360 Query: 87 LEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-KGLIGHTQPRRLAARTVANRIAEE 145 LE +++++ V++ GETGSGKTTQ+ + E G +IG TQPRR+AA +VA R++EE Sbjct: 361 LETVKNNKFVVIVGETGSGKTTQITQYLAEEGFNKGNMIIGCTQPRRVAAVSVAKRVSEE 420 Query: 146 LKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLN 205 + G +GY +RF D+ SD T +K MTDG+L E D++L +Y I++DEAHER++ Sbjct: 421 VGCRLGQEVGYTIRFEDNTSDVTKIKYMTDGMLQREAMVDKMLSKYSVIMLDEAHERTIA 480 Query: 206 IDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 D L LK +R DLKII+TSAT+D +FS +F N PII++ GRT+PVE+ Y Sbjct: 481 TDVLFVLLKTAAMKRDDLKIIVTSATLDSGKFSTYFENCPIIQIPGRTFPVEIFY----- 535 Query: 266 EADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKLNL-----RHTE 319 + E D LQA + V + + ES GDIL+F++G+ EI + L + + Sbjct: 536 -TKEPELDYLQATLECVLSIHKNESRGDILVFLTGQEEIDTCCEVLYEKLIDLHQENELI 594 Query: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 ILP+Y+ L + Q+++F+ R++++ATN+AETS+T+ GI YVIDPG +++ Y + Sbjct: 595 ILPIYSSLPSEMQSKIFEPTPVGKRKVIIATNIAETSITIDGIYYVIDPGFVKVNAYDPK 654 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASV 436 + L + PISQA A QR GR GR G C RLY+E + + PEI R NLA Sbjct: 655 LGMDSLMVTPISQAQAKQRAGRAGRTGPGKCFRLYTETGYNKEMLPNSIPEIQRQNLAHT 714 Query: 437 ILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQL 496 IL + A+G+ D+ F F++ P + + + L L A+T D LT LGR+++ Sbjct: 715 ILMLKAMGVQDLIGFEFMDPPPLKTMLSALEELYNLEALTEDGD-----LTELGRRMADF 769 Query: 497 PVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM-DKQQASDEKHRRFHDKESDF 555 P+DP LA++++++ + GC E + I S LS+Q RP + ++ +DEK RF+ D Sbjct: 770 PMDPGLAKVLIKSIEFGCSEEMLSIVSMLSVQSIFYRPTGELRKKADEKRVRFNHPHGDH 829 Query: 556 LAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615 + +N++ +K + + + + C+ ++++Y + +D+ TQL++++ + G + S Sbjct: 830 MTMLNVY------EKWVRNGSSKEWCKDNFIHYRSLLRVRDVRTQLKKIMNKYGSEMRSC 883 Query: 616 PAEYREIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFP-GSGLFKKPPKWVMVAEL 673 I + L G + KD++ Y T N + P S K ++V+ L Sbjct: 884 GQNSNLIRVNLCCGFFKNTAKKDSETSCYKTLLENTTVYLHPSSSLFGKSSSEYVIYHTL 943 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 + T++ + + I+P W+ A + +E +R + Sbjct: 944 LLTTKEYMHCVSVIEPTWLVEQAPRFFAKADTEQVNKRKR 983 >UniRef50_Q6P404 DEAH (Asp-Glu-Ala-His) box polypeptide 38 n=9 Tax=Eukaryota RepID=Q6P404_DANRE Length = 1258 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 233/695 (33%), Positives = 379/695 (54%), Gaps = 37/695 (5%) Query: 42 AQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGE 101 + F + KE +A+ ++ + Y LP+ +Q +L IRD+ +VIV GE Sbjct: 531 RAEQKFADHMKEKSEASSDFAKKKTLLEQRQY---LPIFAVRQQLLNIIRDNNIVIVVGE 587 Query: 102 TGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFS 161 TGSGKTTQL + E G G++G TQPRR+AA +VA R++EE+ + G +GY +RF Sbjct: 588 TGSGKTTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFE 647 Query: 162 DHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP 221 D S+ TM+K MTDGILL E ++ L Y +I+DEAHERSLN D L G L+E++ RR Sbjct: 648 DCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRS 707 Query: 222 DLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDA 281 DLK+I+TSAT+D ++F+ F N PI + GRT+PV++ + +E D ++A Sbjct: 708 DLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQE------DYVEAAVKQ 761 Query: 282 VDELSQESH-GDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRV 335 ++ GDILIFM G+ +I T+D + + N +LP+Y++L + Q ++ Sbjct: 762 ALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAKI 821 Query: 336 FQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASA 393 FQ R+ ++ATN+AETSLTV GI +V+D G ++ ++ R + L + PISQA+A Sbjct: 822 FQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANA 881 Query: 394 NQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFP 452 NQR GR GR G C RLY++ F + T PEI RTNLA+V+L + +LG+ D+ F Sbjct: 882 NQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFH 941 Query: 453 FVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512 F++ P + N+ + + L LGA+ + LTP GR + + P+DP L++M++ + Sbjct: 942 FMDPPPEDNMLNSMYQLWILGALD-----NTGALTPTGRLMVEFPLDPALSKMLIVSCDM 996 Query: 513 GCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572 C + +II S LS+ RP +++ SD+ +F ESD L ++N++ Sbjct: 997 SCSADILIIVSMLSVPSIFYRPKGREEESDQVREKFSVPESDHLTYLNVYLQW------K 1050 Query: 573 SSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLS 632 ++N C +++ +R+ +++ QL+ ++ + + + S +++ I + Sbjct: 1051 NNNYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYF- 1109 Query: 633 HIGMKDADKQEYTGAR-NARFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDP 689 H K EY R + P S LF P +++ ELV T++ + + +D Sbjct: 1110 HQAAKLKGIGEYVNVRTGMPCHLHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDG 1169 Query: 690 EWVEPVAQHLIK-RTYSEPHWERAQGAVMATEKVT 723 EW+ + + + E + A E++T Sbjct: 1170 EWLAELGPMFYSIKHAGKSRQENRRR---AKEEIT 1201 >UniRef50_B0JZ95 Dhx16 protein n=5 Tax=Fungi/Metazoa group RepID=B0JZ95_XENTR Length = 1016 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 239/704 (33%), Positives = 385/704 (54%), Gaps = 35/704 (4%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAA-GKVLLREAARPEITYPD---N 76 +D ++ + +N Q +M ID+ +L E+ R +++ + + Sbjct: 314 AKDAHDHGKKEYDFVMEENEVIQFVSSAQMKGTIDKEEENSEVLSESERKKLSIQEVRRS 373 Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LPV + D+L+AI DHQ++I+ GETGSGKTTQ+P+ E G G IG TQPRR+AA Sbjct: 374 LPVFPYRSDLLQAISDHQILIIEGETGSGKTTQIPQYLHEHGYTKNGLKIGCTQPRRVAA 433 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +V+ R+++E+ + G +GY +RF D S+ T++K MTDG+LL E + L Y II Sbjct: 434 MSVSARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVII 493 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 IDEAHER+L+ D L G +K++ R DLK+++ SAT++ ERFS F++AP+ + GR YP Sbjct: 494 IDEAHERTLHTDVLFGLIKDIARFRQDLKVLVASATLNTERFSSFFDDAPVFRIPGRRYP 553 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN 314 V++ Y E D L+A +V ++ + GDIL+F++G+ EI + L + Sbjct: 554 VDIYY------TKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIETCCEMLQERC 607 Query: 315 LR------HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDP 366 R +LP+YA L + Q ++F+ R++V+ATN+AETSLT+ GI YVIDP Sbjct: 608 RRLGSKIAEMLVLPIYANLPSDMQAKIFEPTPPGARKVVIATNIAETSLTIDGIIYVIDP 667 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTD 425 G + Y+ R+ ++ L + P S+ASANQR GR GRV+ G C RLY+ + + + T Sbjct: 668 GFCKQKSYNARSGMESLIVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEDTTV 727 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI RTNL +V+L + +LG+ D+ F F++ P + + L LGA+ + Sbjct: 728 PEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALN-----HLGE 782 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDEK 544 LT LGR++++LPVDP L++++L ++++GC + + I + LS+ + RP DK +D Sbjct: 783 LTKLGRRMAELPVDPMLSKIILASEQYGCSEQILTIAAMLSVNNTIFYRPKDKLVHADTA 842 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 F D + +N++ E +L + C +++ +R +D+ QL + Sbjct: 843 RANFTVPGGDHMVLLNVYTQWVESGHSL------QWCYENFIQARSLRRARDVREQLEGL 896 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 + + I + S + + A+ G H T + I P S L ++ Sbjct: 897 MGRIEIELTSCEGDSIPVRKAITAGYFYHTARLTRSG-YKTVKQQQAVYIHPNSSLHEEQ 955 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK-RTYSEP 707 P+WV+ ELV T++ + R ID W+ VA H K R +P Sbjct: 956 PRWVIYHELVFTTKEYMRQIIEIDSTWLLEVAPHYYKSRELEDP 999 >UniRef50_Q75EQ9 AAR020Wp n=2 Tax=Saccharomycetaceae RepID=Q75EQ9_ASHGO Length = 1112 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 240/704 (34%), Positives = 386/704 (54%), Gaps = 33/704 (4%) Query: 5 QKLTFTALQQRLDSLMLRDRL-RFSRRLH--GVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 KL Q++L D+ R R L G KK D Q+A+ K + A Sbjct: 376 SKLLQEHRQEKLALQKSTDKKERLLRELDDSGHKKKAFEDKQRALTAWERKRM--AEKVT 433 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 + ++LPV + ++ ++ AIRD+Q +++ GETGSGKTTQ+ + E G + Sbjct: 434 YGKRTNLSIKQQRESLPVFKMRETLVSAIRDNQFLVIVGETGSGKTTQITQYLDEEGFSV 493 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G+IG TQPRR+AA +VA R++EE+ + G +GY +RF D S T +K MTDG+L E Sbjct: 494 GGMIGCTQPRRVAAVSVAKRVSEEMGCKLGEDVGYTIRFEDQTSRKTRIKYMTDGMLQVE 553 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 D + +Y I++DEAHER+++ D L LK+ +RPDL++I+TSAT+D E+FS++F Sbjct: 554 ALLDPTMSRYSVIMLDEAHERTVSTDVLFSLLKQAALKRPDLRVIVTSATLDSEKFSKYF 613 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGE 300 + P+I++SG+T+PV+V Y + + D ++A D V E+ ES GDIL+F++ + Sbjct: 614 LDCPVIKISGKTFPVDVIYS------ETPQLDYIEAALDTVMEIHINESPGDILVFLTSQ 667 Query: 301 REIRDTADALN------KLNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAE 352 EI + L K ++ ILP+Y+ L + Q+++F+ R+++ ATN+AE Sbjct: 668 EEIDACCEILYERVQALKETIQELLILPVYSALPSEVQSKIFEPTPKGSRKVIFATNIAE 727 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TS+T+ GI YV+DPG A+ + Y+ + +++L + PISQ+ A+QRKGR GR G C RL+ Sbjct: 728 TSITIDGIYYVVDPGYAKSNIYNPKIGIEQLVVSPISQSQADQRKGRAGRTGPGKCYRLF 787 Query: 413 SEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 +E F + PEI R NL IL + A+G+ D+ F F++ P + ++ + L Sbjct: 788 TEAAFHREMVPNSVPEIQRQNLEHTILMLKAMGINDLLNFDFMDPPPRSSMVHALEALYN 847 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 L A+ D LT LG+++SQ P++P L++ ++ + + GC E + I + LS+Q+ Sbjct: 848 LQALDEDGY-----LTQLGKRMSQFPMEPALSKSLIASVEQGCSDEILTIIAMLSVQNVF 902 Query: 532 ERPMDKQQASD-EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RP DK Q + K FH D L +N+ N E +N + C ++L+ Sbjct: 903 YRPKDKIQETRYSKKHGFHHPFGDHLTLLNIHNRWQE------NNFSKSFCAENFLHERH 956 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 +R +D+ QL+++ K L +P+ S I L++G + +D T Sbjct: 957 LRRAKDVKEQLKRIFKNLDLPIRSCHGNVDLIRKTLVSGFFRNAAKRDPQVGYKTIVDET 1016 Query: 651 RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 SI P S LF K +V+ LV TS+ + ID +W+ Sbjct: 1017 AVSIHPSSCLFGKECDYVIYHSLVLTSKEYMSQVTLIDRKWLMD 1060 >UniRef50_Q54NJ4 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 n=19 Tax=Eukaryota RepID=DHX15_DICDI Length = 727 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 224/658 (34%), Positives = 373/658 (56%), Gaps = 29/658 (4%) Query: 59 GKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG 118 K + + LPV ++K+D ++ I+++QVVI+ GETGSGKTTQ+P+ ++ G Sbjct: 59 KKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAG 118 Query: 119 RGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 G ++G TQPRR+AA +VA R++EE+ E G +GY +RF + S T +K +TDG+ Sbjct: 119 LIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGM 178 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LL E D L +YD II+DEAHER+L+ D L G +K++L RR DLK+I+ SAT++ +F Sbjct: 179 LLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKF 238 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIF 296 ++F NAP+I+V GR +PVE+ Y ++ +D L+ A+ +D + E GDIL+F Sbjct: 239 QKYFENAPLIKVPGRLHPVEIFY------TEEAAKDYLESAVRTVIDIHTNEGTGDILVF 292 Query: 297 MSGEREIRDTADALNK----LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAE 352 ++GE EI DT + + L + LPLY+ L +Q+++F + R+ +++TN+AE Sbjct: 293 LTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKERKCIVSTNIAE 352 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TSLT+ GI +V+DPG ++ Y+ R++V+ L + PIS+ASANQR GR GR G C RLY Sbjct: 353 TSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLY 412 Query: 413 SEDDFLSRP-EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 +E F + T PEILR+NLASV+LQ+ LG+ D+ F F++ P + + +L Sbjct: 413 TEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHY 472 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 LGA+ + Q LT +G +S+ P+DP+L++M++ + + C E + I + LS + Sbjct: 473 LGALDDEGQ-----LTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCF 527 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 RP D + +D + F + D L +N+++ + + + C ++LN+ + Sbjct: 528 MRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPT------WCYDNFLNHRAI 581 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMKDADKQEYTGA 647 ++ + +QL +++ +P+ S Y I + G + + +T Sbjct: 582 KQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLG 641 Query: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 P +GL ++ P++ + E V TS + R + +W+ +A K+ Sbjct: 642 DEQSVIFHPSTGLTRR-PEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSF 698 >UniRef50_Q5KGT3 Pre-mRNA splicing factor, putative n=7 Tax=Dikarya RepID=Q5KGT3_CRYNE Length = 1261 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 228/698 (32%), Positives = 368/698 (52%), Gaps = 36/698 (5%) Query: 16 LDSLM-LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYP 74 L +LM ++D + +N A + K + + + Y Sbjct: 501 LGNLMGVKDEPDLGQEGQKDGVTENYKADSQFSSHLKK--SEGVSNFAKSRTLKEQREY- 557 Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 LP +++++ IRDHQV++V GETGSGKTTQL + E G G+IG TQPRR+A Sbjct: 558 --LPAFAVREELMGMIRDHQVLVVVGETGSGKTTQLGQFLYEDGYCANGMIGCTQPRRVA 615 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VA R++EE++ G +GY +RF D S +T +K MTDG+LL E + L +Y I Sbjct: 616 AMSVAKRVSEEMECTLGETVGYAIRFEDCTSKDTKIKFMTDGVLLRESLNEGDLDRYSVI 675 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHERSL+ D L+G L+++L RR DLK+I+TSAT++ E+FS+ F NA + GRT+ Sbjct: 676 ILDEAHERSLSTDILMGLLRKILTRRRDLKLIVTSATMNAEKFSQFFGNAATYTIPGRTF 735 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL 313 PVE+ + E D + + V ++ S GDIL+FM+G+ +I + + Sbjct: 736 PVEIFHSKSPCE------DYVDSAIKQVLQIHLSSSQGDILVFMTGQEDIECCCQVIEER 789 Query: 314 -----NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDP 366 + +LP+Y+++ Q ++FQ R++V+ATN+AETSLTV GI YV+D Sbjct: 790 LSQLDDPPPLAVLPIYSQMPADLQAKIFQPTPDGRRKVVVATNIAETSLTVDGILYVVDC 849 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EFTD 425 G +++ Y+ + + L I PISQA+ QR GR GR G C RLY+E +L+ Sbjct: 850 GYSKLKVYNPKVGMDALQITPISQANCGQRAGRAGRTGPGFCYRLYTETAYLNELFASNI 909 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI RTNLA+ +L + +LG+ ++ F F++ P + NI + + L LGA+ + Sbjct: 910 PEIQRTNLANTVLLLKSLGVKNLLEFDFMDPPPQENILNSMYQLWVLGALD-----NVGN 964 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT +GR++S P++P LA+M++ + + C E + I S LS+ RP + + SD Sbjct: 965 LTSIGRKMSDFPMEPSLAKMLIVSVDYQCSSEMLTIVSMLSVPSVFYRPPQRAEESDAAR 1024 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 +F ESD L ++++ S+ C +L+ +R+ +++ QL ++ Sbjct: 1025 EKFFVPESDHLTLLHVYTQW------KSNGYSDSWCMKHFLHPKLMRKAREVRGQLEDIM 1078 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA-RFSIFPGSGLF--K 662 K+ + + S ++ + + G H + EY R + P S L+ Sbjct: 1079 KQQKMDLLSVGTDWDIVRKCITAGYF-HQAARVKGIGEYMNIRTGLPCVLHPTSALYGLG 1137 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 P +V+ ELV TS+ + +DP W+ + Sbjct: 1138 YMPDYVVYHELVLTSKQYMMCVTSVDPYWLADLGSVFF 1175 >UniRef50_Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=55 Tax=Fungi/Metazoa group RepID=PRP16_HUMAN Length = 1227 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 230/689 (33%), Positives = 373/689 (54%), Gaps = 36/689 (5%) Query: 31 LHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA--------RPEITYPDNLPVSQK 82 + GVKK + PD ++ +Q + R++ + + LP+ Sbjct: 478 IMGVKKEEEPDKAVTEDGKVDYRTEQKFADHMKRKSEASSEFAKKKSILEQRQYLPIFAV 537 Query: 83 KQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRI 142 +Q++L IRD+ +VIV GETGSGKTTQL + E G G+IG TQPRR+AA +VA R+ Sbjct: 538 QQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRV 597 Query: 143 AEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202 +EE+ G +GY +RF D S+NT++K MTDGILL E ++ L Y II+DEAHER Sbjct: 598 SEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHER 657 Query: 203 SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP 262 SLN D L G L+E++ RR DLK+I+TSAT+D E+F+ F N PI + GRT+PV++ + Sbjct: 658 SLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSK 717 Query: 263 IVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-----NLR 316 +E D ++A ++ + GDILIFM G+ +I T+D + + N Sbjct: 718 TPQE------DYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAP 771 Query: 317 HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRY 374 +LP+Y++L + Q ++FQ R+ ++ATN+AETSLTV GI +VID G ++ + Sbjct: 772 ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVF 831 Query: 375 SYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNL 433 + R + L I PISQA+ANQR GR GR G C RLY++ + + T PEI RTNL Sbjct: 832 NPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNL 891 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 A+V+L + +LG+ D+ F F++ P + N+ + + L LGA+ + LT GR + Sbjct: 892 ANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALD-----NTGGLTSTGRLM 946 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKES 553 + P+DP L++M++ + GC E ++I S LS+ RP +++ SD+ +F ES Sbjct: 947 VEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPES 1006 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613 D L ++N++ ++N C +++ +R+ +++ QL+ ++ + + + Sbjct: 1007 DHLTYLNVYLQW------KNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLA 1060 Query: 614 SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK--PPKWVMVA 671 S ++ + + + + P S LF P +++ Sbjct: 1061 SCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYH 1120 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLI 700 ELV T++ + + +D EW+ + Sbjct: 1121 ELVMTTKEYMQCVTAVDGEWLAELGPMFY 1149 >UniRef50_C0SAG2 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 n=2 Tax=Eukaryota RepID=C0SAG2_PARBP Length = 1093 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 240/689 (34%), Positives = 373/689 (54%), Gaps = 43/689 (6%) Query: 30 RLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 +L G +K +Q +FQ+ +Q A + +LP+ + +++I++A Sbjct: 409 KLEGDRKPL--TKEQQLFQQKLNAAEQKAASIEETR---------KSLPIYRFREEIIQA 457 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVANRIAEELKT 148 + DHQ++I+ GETGSGKTTQ+P+ E G G+ IG TQPRR+AA +VA R+AEE+ Sbjct: 458 VADHQIIIIVGETGSGKTTQIPQYLHEAGYTKGGMKIGCTQPRRVAAMSVAARVAEEMGV 517 Query: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 + G +GY +RF D SD T++K MTDG+LL E+ + L Y ++IDEAHER+++ D Sbjct: 518 KVGNEVGYAIRFEDATSDKTVLKYMTDGMLLRELLTEPDLGAYSVLMIDEAHERTVSTDI 577 Query: 209 LLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEAD 268 G LK++ RPDLK++I+SATID ++F ++F++API + GR YPV++ Y Sbjct: 578 ACGLLKDIAKARPDLKLLISSATIDAQKFQKYFDDAPIFNIPGRRYPVDIHY------TL 631 Query: 269 DTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK------LNLRHTEIL 321 E + L A V + + GDIL+F++G+ EI ++ + + I Sbjct: 632 QPEANYLAAAITTVFHIHISQGKGDILVFLTGQEEIEAAEQSIQETARKLGSKIPELIIC 691 Query: 322 PLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK 379 P+YA L + Q ++F+ R++VLATN+AETSLT+ GI YVIDPG + + ++ RT Sbjct: 692 PIYANLPSELQAKIFEPTPPGARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTG 751 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD-FLSRPEFTDPEILRTNLASVIL 438 ++ L + P S+ASA QR GR GRV G C RLY++ + E T PEI RTNL V+L Sbjct: 752 MESLVVTPCSRASAGQRAGRAGRVGPGKCFRLYTKWAYYNELEENTTPEIQRTNLNGVVL 811 Query: 439 QMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPV 498 + +LG+ + F F++ P + + L LGA+ LT +GRQ+++ P Sbjct: 812 MLKSLGIDQLLDFDFMDPPPAETLIRALEQLYALGALNDHGD-----LTKVGRQMAEFPT 866 Query: 499 DPRLARMVLEAQKHGCVREAMIITSAL-SIQDPRERPMDKQQASDEKHRRFHDKE-SDFL 556 DP LA+ +L A K+GCV E + I + L RP DK+ +D RF K+ D Sbjct: 867 DPMLAKAILAADKYGCVEEVLSIIAMLGEASSLFFRPKDKKIHADSARARFTIKDGGDHF 926 Query: 557 AFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 616 + +N+WN + S+ R ++L + +D+ QL ++ + + + S Sbjct: 927 SLLNVWNQW------VDSDFSYVWARENFLQQRSLTRARDVRDQLAKLCDRVEVTITSSG 980 Query: 617 -AEYREIHIALLTGLLSHIGMKDADKQEYTGARN-ARFSIFPGSGLFKKPPKWVMVAELV 674 + I A+ G + Y +N + P S LF+ PKWV+ ELV Sbjct: 981 SSNLVPIQKAITAGFFPNAARLQRGGDSYRTVKNGQTVYLHPSSTLFEVNPKWVIYYELV 1040 Query: 675 ETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 TS+ + R + PEW+ VA H K+ Sbjct: 1041 LTSKEYMRSNMPLQPEWLVEVAPHYHKKK 1069 >UniRef50_C0W5B9 Putative uncharacterized protein (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W5B9_9ACTO Length = 780 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 355/780 (45%), Positives = 487/780 (62%), Gaps = 77/780 (9%) Query: 291 GDILIFMSGEREIRDTADAL------------NKLNLRHTEILPLYARLSNSEQNRVFQS 338 GDIL+F++GER+IRDT AL E++PLY+RL+ +EQ+RVF++ Sbjct: 1 GDILVFLAGERDIRDTESALIDHLGPRYTMDGRTRTPGAVEVVPLYSRLTAAEQHRVFEA 60 Query: 339 HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398 HS RRIVLATNVAETSLTVPGI+YVIDPG ARISRYS RTKVQRLPIEPISQASANQR G Sbjct: 61 HSCRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSNRTKVQRLPIEPISQASANQRSG 120 Query: 399 RCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 RCGRV++GI IRLYSE D+LSRPE+T+PEILRT+LASVILQM LGLG + FPF++APD Sbjct: 121 RCGRVADGIAIRLYSEADYLSRPEYTEPEILRTSLASVILQMANLGLGAVEDFPFLDAPD 180 Query: 459 KRNIQDGVRLLEELGAITTD------EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512 R ++DG++LL E+GAI + +LT +GR+L++LP+DPRL RM+L A + Sbjct: 181 HRAVRDGIQLLTEIGAIEPSMSGRSGRSSRGPRLTEVGRRLARLPIDPRLGRMLLRAGEL 240 Query: 513 GCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572 GC E M+I +ALSIQD RERP+DKQ+ +D HRRF D SDFL ++NLW YL Q + L Sbjct: 241 GCAGEVMVIVAALSIQDVRERPLDKQEQADALHRRFADPTSDFLTYLNLWRYLRTQSREL 300 Query: 573 SSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV-------------------- 612 S +AFRR+C+ ++L+YLRVREWQD++TQLRQ+ + LG+ Sbjct: 301 SGSAFRRMCKAEFLHYLRVREWQDVHTQLRQLSRPLGLDAAPVELPTARSIRAARQALEP 360 Query: 613 ---------------------NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 +++ + IH +LL GLLS++G D ++EY+GAR R Sbjct: 361 GSHAAQIAHGDVAAAVVALGKSADTPDADAIHRSLLVGLLSNVGHWDERRREYSGARGTR 420 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH--LIKRTYSEPHW 709 F I+PGSGL +K WVM AELVETS L+ R A++D WVE A+ L+++ + EP+W Sbjct: 421 FMIWPGSGLRRKTYDWVMTAELVETSHLFARTVAKVDSRWVEETARQAGLLRQVFGEPYW 480 Query: 710 ERAQGAVMATEKVTVYGLPIVAARKVNYSQI----DPALCRELFIRHALVEGDWQTRHAF 765 G M EKV VYG+ + A R + + + RE+F+R LVEG W RH F Sbjct: 481 STKNGCAMVHEKVMVYGMTLAADRPATLASVGTPAAREVAREMFLRSGLVEGGWHARHGF 540 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 N L E+ ++E + R +L DE L+ FYD R+ +V A FD+WW++ P Sbjct: 541 VSRNRDLIEELSDVEQRRREHGLLASDEALYRFYDDRVPDEVTGANDFDAWWRREKGRHP 600 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 LL++ + +L+ E YP+ W QG+L L L Y FEPG DGV+V +P+ +L + Sbjct: 601 HLLDYTRELLLPGADEDSLAAGYPDAWVQGDLTLGLDYVFEPGQADDGVSVLVPVEVLGR 660 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK----------PL 935 +E +GF+W +PG+R ELV+A I++LPK VRR VPAP+ ++ Sbjct: 661 LEPAGFDWLVPGMRAELVVATIRALPKRVRRQLVPAPDVGAQVWAAMREEYQTPAGASAP 720 Query: 936 ELPLLDSLERELRRMTGVTVDREDWHWDQ--VPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 ++ + R+ GV V DW Q +PDHL+++F +D + +++ G+ L L+ Sbjct: 721 PASFQEAFTAAVARLRGVEVTEADWAEAQEHLPDHLRVSFVALDSRGREIGRGKDLVALQ 780 >UniRef50_C4Y9K0 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y9K0_CLAL4 Length = 1131 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 222/696 (31%), Positives = 366/696 (52%), Gaps = 33/696 (4%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEIT-YPDNLPVSQKKQDILEAIRDHQ 94 + KN D +Q +E +K +QA + ++ ++ LPV ++ +L A+RD+Q Sbjct: 424 EEKNKDKEQNKDKEQSKGKEQAPYSKSRKNVSKSDLAQSRKRLPVYAMREQLLSAVRDNQ 483 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGI-KGLIGHTQPRRLAARTVANRIAEELKTEPGGC 153 VIV GETGSGKTTQ+ + E +I TQPRR+AA +VA R+A+E+ G Sbjct: 484 FVIVVGETGSGKTTQIVQYLYEENFHRGDKIIACTQPRRVAAESVAKRVAQEVGCPLGQE 543 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY +RF D S T +K MTDG+L E D + +Y +++DEAHER++ D L L Sbjct: 544 VGYTIRFDDRTSPATRIKYMTDGMLQREALLDPQMSKYAVVMLDEAHERTVATDVLFALL 603 Query: 214 KELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 K+ PDL+++ TSAT+D ++FSR+F P++ V GRT+PVE+ Y + E D Sbjct: 604 KKAARANPDLRVLATSATLDADKFSRYFGGCPVLHVPGRTFPVEIMYS------REPEPD 657 Query: 274 QLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN------KLNLRHTEILPLYAR 326 + A D V ++ E GDIL+F++G+ EI +AL + +LP Y+ Sbjct: 658 YVAAALDCVMQIHVAEDSGDILVFLTGQDEIDTCCEALEARIKTLGRAVPELLVLPAYSA 717 Query: 327 LSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 384 L +Q R+F+ R++VLATN+AETS+T+ GI+YV+DPG +++ Y R + L Sbjct: 718 LPPDQQARIFEPAPPGARKVVLATNIAETSITIDGIRYVVDPGFVKLNAYDPRLGMDSLV 777 Query: 385 IEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTAL 443 + PISQA ANQR GR GR + G C RLY+E+ F T PEI R NL IL + A+ Sbjct: 778 VSPISQAQANQRSGRAGRTAPGKCFRLYTEEAFRTEMRPNTVPEIQRQNLEHTILMLKAM 837 Query: 444 GLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLA 503 G+ D+ F F++ P ++ L L A+ + LT +GR+++ P++P LA Sbjct: 838 GIDDVLRFEFMDPPPAPTTVQALKELYVLDALDENG-----HLTSMGRRMADFPMEPALA 892 Query: 504 RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN 563 + VL + C + + + + LS+Q+ RP DKQ A+D++ +RFH D L +N++ Sbjct: 893 KTVLASVDLSCASDVLSVVAMLSVQNVFYRPKDKQAAADQRKQRFHSVHGDHLTLLNVFR 952 Query: 564 YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIH 623 + S R C +++ + ++ QL ++ + V+ ++ + Sbjct: 953 GWEQ------SGRSRSWCAENFVQERAMWRAFEVRKQLAAIMVRFRLDVH--GSDASAVR 1004 Query: 624 IALLTGLLSHIGMKDADKQEYTGA-RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 A G + +D + +T + P S ++ K +V+ L+ T++ + Sbjct: 1005 KAFCAGYFRNSAKRDPHEGIFTTLVDQTPVHLHPSSAVYGKSVDYVIYHTLLLTTKEYMH 1064 Query: 683 IAARIDPEWVEPVAQHLIKRTYS-EPHWERAQGAVM 717 + +DP+W+ +A + + P R + ++ Sbjct: 1065 CVSVVDPKWLVELAPRFFQPSDPNNPSERRKRQKIV 1100 >UniRef50_Q10752 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 n=162 Tax=Eukaryota RepID=CDC28_SCHPO Length = 1055 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 229/670 (34%), Positives = 369/670 (55%), Gaps = 31/670 (4%) Query: 46 IFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSG 105 + +++ E K+ + + + +LPV Q K D+L+AI ++QV+++ ETGSG Sbjct: 387 LDTKLSAENPVDTDKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSG 446 Query: 106 KTTQLPKICMELGRGI-KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHV 164 KTTQLP+ E G I TQPRR+AA +VA R+A+E+ G +GY +RF + Sbjct: 447 KTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENAT 506 Query: 165 SDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLK 224 S+ T++K +TDG+LL E + L Y IIIDEAHER+L+ D L G +K++ RPDLK Sbjct: 507 SEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLK 566 Query: 225 IIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDE 284 ++I+SATID E+FS +F+ AP+ V GR YPV++ Y P E + +QA + + Sbjct: 567 VLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTP------QPEANYIQAAITTILQ 620 Query: 285 LS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ 337 + + GDIL+F++G+ EI ++ + +L + + P+YA L + Q ++F Sbjct: 621 IHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFD 680 Query: 338 --SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 R++VLATN+AETS+T+ G+ +VID G + + Y+ RT ++ L P S+ASA+Q Sbjct: 681 PTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQ 740 Query: 396 RKGRCGRVSEGICIRLYSEDDFLSRPEF-TDPEILRTNLASVILQMTALGLGDIAAFPFV 454 R GR GRV G C RLY+ + + + T PEI RTNL +++L + +LG+ ++ F F+ Sbjct: 741 RAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFM 800 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 +AP + + LL LGA+ + +LT LGRQ+++ P DP L++ ++ + K+GC Sbjct: 801 DAPPPETLMRSLELLYALGALN-----NRGELTKLGRQMAEFPTDPMLSKSLIASSKYGC 855 Query: 515 VREAMIITSAL-SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 V E + I S L RP DK +D+ F D L +++WN + Sbjct: 856 VEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEW------VD 909 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY-REIHIALLTGLLS 632 ++ R ++L Y + +D+ QL + + + I + + +E I A+ G S Sbjct: 910 TDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFS 969 Query: 633 HIGMKDADKQEYTGAR-NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEW 691 + D Y + N I P S + +K PK ++ ELV T++ + R I PEW Sbjct: 970 NAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEW 1029 Query: 692 VEPVAQHLIK 701 + ++ H K Sbjct: 1030 LLEISPHYFK 1039 >UniRef50_P53131 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 n=167 Tax=Eukaryota RepID=PRP43_YEAST Length = 767 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 234/692 (33%), Positives = 372/692 (53%), Gaps = 42/692 (6%) Query: 43 QQAIFQEMAKEIDQAAGKVLLREAARPE----ITYPDNLPVSQKKQDILEAIRDHQVVIV 98 + E A++++ P+ + LPV ++ + L+ +++Q+++ Sbjct: 55 RHHTSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVF 114 Query: 99 AGETGSGKTTQLPKICM--ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 GETGSGKTTQ+P+ + E+ + TQPRR+AA +VA R+AEE+ + G +GY Sbjct: 115 VGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGY 174 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 +RF + S+ T++K MTDG+LL E +D L +Y II+DEAHER+L D L+G LK++ Sbjct: 175 SIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQV 234 Query: 217 LPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ 276 + RRPDLKIII SAT+D E+F R+FN+AP++ V GRTYPVE+ Y P + +RD L Sbjct: 235 VKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTP------EFQRDYLD 288 Query: 277 AIFDAVDELSQ-ESHGDILIFMSGEREIRDTADAL--------NKLNLRHTEILPLYARL 327 + V ++ E GDIL+F++GE EI D + + + PLY L Sbjct: 289 SAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSL 348 Query: 328 SNSEQNRVFQS-------HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 +Q R+F+ GR++V++TN+AETSLT+ GI YV+DPG ++ Y+ R +V Sbjct: 349 PPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRV 408 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQ 439 + L + PIS+ASA QR GR GR G C RLY+E+ F E + PEILR+NL+S +L+ Sbjct: 409 ESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLE 468 Query: 440 MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD 499 + LG+ D+ F F++ P + + L L + + LTPLGR SQ P+D Sbjct: 469 LKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGN-----LTPLGRLASQFPLD 523 Query: 500 PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV 559 P LA M++ + + C +E + I + LS+ + RP ++ +D+ F + D + + Sbjct: 524 PMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLL 583 Query: 560 NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS----E 615 N+++ + + CR YLNY + +I +QL +++ + +N+ Sbjct: 584 NVYHAFKSDEAYEYG--IHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYES 641 Query: 616 PAEYREIHIALLTGLLSHIGMKDAD-KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELV 674 P + I AL +G + K + K T N I P + L +WV+ E V Sbjct: 642 PKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVL-GHDAEWVIYNEFV 700 Query: 675 ETSRLWGRIAARIDPEWVEPVAQHLIKRTYSE 706 TS+ + R + PEW+ +A + + Sbjct: 701 LTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQ 732 >UniRef50_O45244 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 n=4 Tax=Chromadorea RepID=DHX16_CAEEL Length = 1008 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 228/667 (34%), Positives = 372/667 (55%), Gaps = 34/667 (5%) Query: 51 AKEIDQAAGKVLLREAARPEITYPD---NLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 A ++ +V+ EA + +++ + +LPV + +EA+++HQV+I+ GETGSGKT Sbjct: 335 ALQMPGTNEEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKT 394 Query: 108 TQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD 166 TQLP+ E G G IG TQPRR+AA +VA R+A+E+ + G +GY +RF D S+ Sbjct: 395 TQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSE 454 Query: 167 NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII 226 T++K MTDG+LL E + L Y ++IDEAHER+L+ D L G +K++ R DLK++ Sbjct: 455 KTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLL 514 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 I+SAT+D E+FS F++API + GR +PV++ Y E D + A + ++ Sbjct: 515 ISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYY------TQAPEADYVDAAIVTIMQIH 568 Query: 287 --QESHGDILIFMSGEREIRDTADALNKLN------LRHTEILPLYARLSNSEQNRVFQS 338 Q GDIL+F++G+ EI +AL + + ++ LP+YA L + Q ++F+ Sbjct: 569 LTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEP 628 Query: 339 HSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 R++VLATN+AETS+T+ GI YVIDPG ++ + + R+ V+ L + IS+A+ANQR Sbjct: 629 TPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQR 688 Query: 397 KGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 GR GR G C RLY+ + E PEI RTNL +V+L + +LG+ D+ F F++ Sbjct: 689 AGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLD 748 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 P + + + L LGA+ +LT LGR++++ P DP +++M++ ++K+ C Sbjct: 749 PPPQETLVIALEQLYALGALN-----HRGELTKLGRRMAEFPCDPCMSKMIIASEKYECS 803 Query: 516 REAMIITSALSIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 E + I + LS RP + +D + F D + +N++N E S Sbjct: 804 EEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQE------S 857 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 + +R C +Y+ + ++ +D+ QL +++ + I S + +I A+ G ++ Sbjct: 858 SFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNV 916 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 D T P S LF++ P+WV+ ELV TS+ + R + I+ W+ Sbjct: 917 SKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLE 976 Query: 695 VAQHLIK 701 VA H K Sbjct: 977 VAPHYYK 983 >UniRef50_B6AI28 Pre-mRNA-processing protein 8, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AI28_9CRYT Length = 878 Score = 799 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 220/691 (31%), Positives = 351/691 (50%), Gaps = 79/691 (11%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 +LPV + +++IL ++ + ++IV GETGSGKTTQ+P+ E G KG I TQPR Sbjct: 194 EIRSSLPVIKYREEILSSLEKYPILIVVGETGSGKTTQIPQYLYEAGYAEKGTIACTQPR 253 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R+AA +VANR+++E+ G +GY +RF D +++T +K MTDGILL E + L Y Sbjct: 254 RVAAMSVANRVSKEMNCRLGSKVGYTIRFEDCTNEDTKIKYMTDGILLREFLSNPDLSGY 313 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRR-----------------PDLKIIITSATIDP 234 ++IDEAHERSL+ D L G +K++ R K+II+SAT++ Sbjct: 314 SCLLIDEAHERSLHTDVLFGLVKDVSKFRNFKDDNLSTKSDCEDSTEPFKLIISSATLEA 373 Query: 235 ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES----- 289 E+F ++F+N+PII + GR YPV++ Y E + + A V ++ Sbjct: 374 EKFGKYFDNSPIIYIPGRRYPVDIYY------TKAPEANFIDATVVTVLQIHLSQLKKSN 427 Query: 290 ------------------------------HGDILIFMSGEREIRDTADALNKL------ 313 GDIL F+ G++EI + + LNK Sbjct: 428 KTEGIIDNNSTIKSLDNIGMNFSRTRIIPTGGDILCFLPGQQEIEECMEMLNKKMLGKGK 487 Query: 314 NLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARI 371 + +LP+YA L + +Q ++F R++VLATN+AET+LT+ I +VID G + Sbjct: 488 EVPELIVLPIYASLPSEQQAQIFISTPQGARKVVLATNIAETALTIDNIGFVIDCGFCKQ 547 Query: 372 SRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-DDFLSRPEFTDPEILR 430 + Y+ +T + L P S+A+ANQR GR GRV G C RLY++ ++ PEI R Sbjct: 548 NSYNPKTGLDSLVTIPCSRAAANQRAGRAGRVRPGKCFRLYTKTSFYMEMEPSNTPEIQR 607 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 NL +V+L + +LG+ D+ F F++ P + + LL L A+ LT +G Sbjct: 608 CNLGNVVLMLKSLGIDDLLHFDFMDPPPPETLVKALELLYGLNALDDKGD-----LTNIG 662 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDEKHRRFH 549 R++++LP+DP +++VL +Q++ V E++II S LS+ + RP DK +D + F Sbjct: 663 RKMAELPLDPMYSKVVLASQRYKVVDESIIIVSMLSLGNTVFIRPRDKSTQADNIRKSFF 722 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 D L +N++ +S C ++++ ++ +DI QL ++++ L Sbjct: 723 RSGGDHLTLLNVYKQWE------NSGESNLWCFENFIHGKSMKRARDIRIQLSELMETLD 776 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM 669 I + S P E I ++ G + T I P S LF+ P+ V+ Sbjct: 777 IEITSNPNEVDGIRKSIAAGFFFQTARINKGGNYSTLRNCHIVDIHPSSSLFESRPQTVV 836 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 ELV T++ + R I EW+ VA H Sbjct: 837 YTELVHTTKEYMRNITEIKAEWLFEVAPHYY 867 >UniRef50_D1H6K3 Whole genome shotgun sequence of line PN40024, scaffold_137.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H6K3_VITVI Length = 1408 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 222/651 (34%), Positives = 351/651 (53%), Gaps = 34/651 (5%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI-GHTQPRR 132 LP++ ++ ++E ++ + +I+ GETGSGKTTQLP+ + G G I G TQPRR Sbjct: 764 RKALPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLPQFLLNGGFCHDGKIIGITQPRR 823 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AA TVA R+AEE E G +GY +RF D S +T +K MTDG+LL E D L +Y Sbjct: 824 VAAVTVAKRVAEECGVELGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFLSRYS 883 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRR------PDLKIIITSATIDPERFSRHFNNAPI 246 II+DEAHER+++ D LLG LK + R P LK+II SA++D FS +F A Sbjct: 884 VIIVDEAHERTIHTDVLLGLLKNVQNARCQGVKFPSLKLIIMSASLDARGFSEYFGGARS 943 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRD 305 + + GR +PV++ Y E D + A + ++ +E GDIL+F++G+ EI Sbjct: 944 VYIQGRQFPVDIFY------THHAEPDYVDAALITIFQIHLEEGPGDILVFLTGQEEIES 997 Query: 306 TADALNKL------NLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTV 357 + + + +P+++ L + +Q + F R+++LATN+AETS+T+ Sbjct: 998 VERLVQERLRQLPEGSQKLLTVPIFSSLPSEQQMKAFMPAPAGFRKVILATNIAETSVTI 1057 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGIKYVIDPG + Y+ T ++ L I S+A A QR GR GR G C RLY E +F Sbjct: 1058 PGIKYVIDPGVVKARTYNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPESEF 1117 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 + T+PEI R NL++VILQ+ ALG+ DI F F+E P + I + L LGAIT Sbjct: 1118 GQLADSTEPEIKRCNLSNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLFLLGAITD 1177 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 D + S P+G Q+++LP+DP ++ ++ A + C+ E +I + LS++ P +K Sbjct: 1178 DSKLSD----PIGHQMARLPLDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYTPREK 1233 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGE--------QQKALSSNAFRRLCRTDYLNYL 589 + + + F E D + +N++ E K + R+ C+ +++N Sbjct: 1234 LEEARTAMKCFSSPEGDHITLINVYRASDEFVEKIKQGNDKEKTEKKLRKWCKENFINSR 1293 Query: 590 RVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 +R +DI++Q+R+ +++G+ V S + + L + +K + A Sbjct: 1294 SLRHARDIHSQIRRHAEQMGLCVASCGDDMLQFRRCLAASFFLNAALKQPEGTYRALASG 1353 Query: 650 ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 I P S LF+ P+ ++ ELV+T+ + R RID W+ +A Sbjct: 1354 QSVRIHPSSVLFRTKPECIIFNELVQTNHCYIRNITRIDFLWLPELAPQYY 1404 >UniRef50_A7ASE9 RNA helicase, putative n=1 Tax=Babesia bovis RepID=A7ASE9_BABBO Length = 931 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 228/664 (34%), Positives = 376/664 (56%), Gaps = 31/664 (4%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 A + R+ R + LP+ + ++L A+R+H +++V GETGSGKTTQ+P+ E Sbjct: 273 AKQRRKQRKEHRKLLEERCRLPIYGYRHELLAAVRNHPILVVVGETGSGKTTQIPQYLYE 332 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 +G G G IG TQPRR+AA +VA R+A+E+ T+ G +GY +RF D S+ T+VK MTDG Sbjct: 333 VGYGKAGKIGCTQPRRVAAMSVATRVAQEVGTKLGQEVGYSIRFEDCTSNQTVVKYMTDG 392 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 +LL E+ + L Y ++IDEAHER+++ D + G +K+L R D ++I+ SAT++ E+ Sbjct: 393 MLLREMMTEPDLSSYSVMMIDEAHERTVHTDIIFGLVKDLCRYRDDFRLIVASATLEAEK 452 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILI 295 F+ +F++API + GR +PV++ Y E + L A V ++ + GDIL+ Sbjct: 453 FALYFDHAPIFRIPGRRFPVQIYY------TKAPEANFLDASVITVLQIHITQPLGDILV 506 Query: 296 FMSGEREIRDTADAL------NKLNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLA 347 F+ G++EI + + L ++R +LP+YA L + Q ++F+ + R+ +LA Sbjct: 507 FLPGQQEIEEVQEELQNRLRNRGKDMRELIVLPVYATLPSDMQAKIFEPTPPNARKAILA 566 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETS+T+ I YVID G +++ YS +T ++ L P S+ASANQR GR GRV G Sbjct: 567 TNIAETSITLNEIVYVIDCGFCKMNSYSPKTGMESLVTVPCSKASANQRTGRAGRVRPGH 626 Query: 408 CIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RLY++ + + DPEI R+NLA V+L + ALG+ D+ F F++ P + + Sbjct: 627 CFRLYTKFSYEKEMDDVNDPEIQRSNLAHVVLSLKALGIDDLINFDFMDPPAPETLIKAL 686 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 L+ LGA+ + LT GR++++LP+DP ++M+L ++K+ C E + I + L Sbjct: 687 ELIYALGALNDKGE-----LTRTGRRMAELPMDPTYSKMLLASEKYKCSNEIITICAMLG 741 Query: 527 IQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY 585 + + RP DKQ +D H+ F D L +N++N + +++ C ++ Sbjct: 742 VGNNIFYRPKDKQLHADNAHKNFFRVGGDHLVLMNVYNQWEDTDFSVA------WCYENF 795 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQ--- 642 + + +R +DI QL +++K + + V S + I +A+ GL + ++ K Sbjct: 796 VQHKSLRRARDIREQLVELMKRVEVEVISNCNDTDAILMAVTAGLFTQAAVRSGPKNNAS 855 Query: 643 EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 T I P S LF + + V+ +LV T+R + RI A+I PEW+ +A H Sbjct: 856 YRTLKNPQNVDIHPQSSLFDQDAQCVVYTDLVMTTRQYMRIVAQIRPEWLSQLAPHYYSS 915 Query: 703 TYSE 706 + Sbjct: 916 DHPA 919 >UniRef50_A3FQE8 Putative uncharacterized protein n=2 Tax=Cryptosporidium RepID=A3FQE8_CRYPV Length = 867 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 241/732 (32%), Positives = 379/732 (51%), Gaps = 58/732 (7%) Query: 15 RLDSLMLRDRLRFSRRLH-GVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY 73 RL + + D+ + S+ L + + + + E++ E + K++ + Sbjct: 138 RLSTRKVIDQEKNSKSLILSDGSLIDFELLETTSTEVSSEF-SSRNKIIESQDIELINDV 196 Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 ++LPV + K+ I++++ +H ++IV GETGSGKTTQ+P+ E G G+I TQPRR+ Sbjct: 197 RNSLPVVKFKEQIIKSLEEHPILIVVGETGSGKTTQIPQYLFEAGYYKNGIIACTQPRRV 256 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA +VA R+A+E+ + GG +GY +RF D S+ T+VK MTDGILL E + L Y Sbjct: 257 AAMSVAARVAKEMGSRLGGLVGYSIRFEDCTSEETVVKYMTDGILLREFLSEPDLKNYSC 316 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRR------------------------PDLKIIITS 229 I+IDEAHERSL+ D L G +K++ R K+II+S Sbjct: 317 ILIDEAHERSLHTDILFGLVKDVSRFRNSDIYLENDIGKNGKIEGCANYNKNPFKLIISS 376 Query: 230 ATIDPERFSRHFNNAPIIEVSGRTYPVEVRY--RPIVEEADDTERDQLQAIFDAVDELSQ 287 AT++ +FS +F+NAPII + GR +PV + Y P D T LQ F + ++ Sbjct: 377 ATLEANKFSEYFDNAPIIYIPGRRFPVNIYYTKSPEANFIDGTVVTVLQIHFSQIKRSNE 436 Query: 288 ESH--------GDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQN 333 GDIL F+ G++EI + L NL ILP+Y+ L + +Q Sbjct: 437 NMSSKKIIPVGGDILCFLPGQQEIEEAQALLESRLVNKDPNLPELIILPIYSSLPSEQQA 496 Query: 334 RVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 ++FQ + R++VLATN+AET+LTV I +V+D G + + Y+ +T ++ L P SQA Sbjct: 497 KIFQTTPYGFRKVVLATNIAETALTVDNIGFVVDCGFCKQNSYNPKTGLESLITVPCSQA 556 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT-DPEILRTNLASVILQMTALGLGDIAA 450 +ANQR GR GRV G C RLY++ F + E + PEI R NL + +L + +LG+ D+ Sbjct: 557 AANQRSGRAGRVRPGKCFRLYTKLSFTTEMEVSNVPEIQRCNLGNAVLVIKSLGIDDLLH 616 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQ 510 F F++ P + + LL LGA+ + LT +GR +++LP+DP +MVL +Q Sbjct: 617 FDFMDPPPPETLIRALELLYSLGALDDKGE-----LTKVGRTMAELPIDPMHGKMVLASQ 671 Query: 511 KHGCVREAMIITSALSIQD-PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQ 569 K+ V EA I S LS+ + RP +K + +D + F D L +N++N Sbjct: 672 KYSVVNEATTIVSMLSVGNSIFIRPKEKAKQADSIRKAFTVHGGDLLTLLNVYNQWQ--- 728 Query: 570 KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-KELGIPVNSEPAEYREIHIALLT 628 S++ C ++L +++ +DI TQ+ ++ ++L I ++S P E I A+ Sbjct: 729 ---SNDFSGYWCYDNFLQVKSLKKARDIKTQIDSLLSEKLDIQISSNPNELEYIRKAITA 785 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688 G + T I P S LF P + ELV T++ + R I Sbjct: 786 GFFLQSARINKGGNYTTIKWRHIVDIHPSSTLFNLKPSAITYTELVLTTKEYMRNLTEIK 845 Query: 689 PEWVEPVAQHLI 700 +W+ VA H Sbjct: 846 TDWLLEVAPHYY 857 >UniRef50_Q5CYX6 Prp16p pre-mRNA splicing factor. HrpA family SFII helicase n=2 Tax=Cryptosporidium RepID=Q5CYX6_CRYPV Length = 1042 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 231/713 (32%), Positives = 383/713 (53%), Gaps = 56/713 (7%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIR 91 G K+ K +++Q+ ++ + + + ++ + + +LPV + + +++ I Sbjct: 279 DGPKEGKYDNSKQSF-----GDLFRKSKDISENDSRQRMLMTRRSLPVYKVRDSLIKLIG 333 Query: 92 DHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPG 151 +H VV+V GETGSGKTTQL + E G +G+IG TQPRR+AA +VA R+A+E+ + G Sbjct: 334 EHMVVVVVGETGSGKTTQLTQYLHEFGYSKRGIIGCTQPRRVAAVSVAQRVADEMNVDLG 393 Query: 152 GCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLG 211 +GY +RF D S +T++K MTDG+L+ E D L +Y II+DEAHERSLN D L G Sbjct: 394 KEVGYTIRFEDFTSKSTVIKYMTDGVLMRESLSDPELERYSAIIMDEAHERSLNTDVLFG 453 Query: 212 YLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTE 271 + +L R D ++I+TSAT+D E+ S F NAPI + GRT+PVE+ Y + Sbjct: 454 IFRSVLSNRRDFRLIVTSATMDSEKLSSFFGNAPIFNIPGRTFPVEIEYLRYFPD----- 508 Query: 272 RDQLQAIFDAVDELS-----------------QESHGDILIFMSGEREIRDTADALNKL- 313 D + A ++ Q+ GDILIFM+G+ +I T +++ Sbjct: 509 -DYIDAAVRQCLKIHCTNPLSLLENKDNSDEKQKKDGDILIFMTGQEDIEATCILISEKL 567 Query: 314 ------NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 ILP+Y++L + Q ++F+ R++++ATN+AETSLT+ GI+YVID G Sbjct: 568 ENLMIDGADPLMILPIYSQLPSDLQAKIFKPSPYRKVIVATNIAETSLTLDGIRYVIDCG 627 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDP 426 ++ Y+ + + L I PISQA+A QR GR GRVS GIC R+Y+E FL+ + P Sbjct: 628 LCKVKVYNPKIGMDSLQITPISQANALQRSGRAGRVSSGICYRMYTEQTFLADMLPNSVP 687 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI RTNL++V+L + +LG D+ +FPF++ P +I + L LGA+ + L Sbjct: 688 EIQRTNLSNVVLLLKSLGSEDVFSFPFIDPPSSSSISTSLYQLWSLGALDDNG-----SL 742 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T LGRQ+++ P+DP L++++L A K C+ EA+++ + L++ RP D+ + +D Sbjct: 743 TDLGRQMARFPLDPPLSKVLLTANKLDCLIEAIVVVAMLTVPSIFYRPKDRLEEADASRE 802 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK 606 +F ESD L +N++ + R +L+ + ++++ Q+ ++ Sbjct: 803 KFSIPESDHLTLLNIFIQWKRHGSNV------RWSERHFLHQKALMRVEEVFNQIVEIYS 856 Query: 607 ELG-------IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 + I P + + A +G + A Q + + I P S Sbjct: 857 NIMSMETMPRIDWKPNPLCWDNLRKAFCSGYFHNSAKIRAIGQYVNLSTSVPTYIHPSSS 916 Query: 660 LFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWE 710 LF P +++ E++ TS+ + + I+PEW+ A H+ K ++ + E Sbjct: 917 LFLSGVNPDYLIYHEVIITSKEYMNAVSAIEPEWLNFYAPHIFKLNINDSNKE 969 >UniRef50_A2EVN8 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EVN8_TRIVA Length = 1006 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 247/715 (34%), Positives = 389/715 (54%), Gaps = 40/715 (5%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE----------AARPE 70 R+ R SR K+ + ++I + E + L E + P Sbjct: 283 AREASRLSREKQETKRSTQG-SSKSIVGLLDDEAPSVIPTIPLSELPEWKRQTFGSFGPT 341 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 + LP+S + I++ + ++V I+ GETG GKTTQ+P+ + G +IG TQP Sbjct: 342 LE-KKKLPISDYESQIIDMLSKNRVFILVGETGCGKTTQIPQFLLRSGIAGDLMIGVTQP 400 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA +VA R+A+E + G IGY+VRF + S NT VK MTDG+LL E DR L Sbjct: 401 RRVAAISVAKRVADETNSIIGDLIGYQVRFEEKTSRNTKVKFMTDGMLLKECLGDRQLSN 460 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y I++DEAHER+++ D L G +KELL + LK+I+TSAT+ E+FS F N P++EV Sbjct: 461 YGVIMLDEAHERTIHTDVLFGLMKELLSKDDRLKVIVTSATLQKEKFSSFFFNCPVLEVP 520 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ--ESHGDILIFMSGEREIRDTAD 308 GRT+PV + A D LQA + V +L Q E GDIL+F++G+ +I + Sbjct: 521 GRTFPVTTSF------AVTAFTDYLQASVNTVLKLHQTEEKPGDILLFLTGQDDIDTACE 574 Query: 309 ALNKLNLRHTE------ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGI 360 + + + E +LP+Y+ L +Q +FQ R++V+ATN+AETS+T+ GI Sbjct: 575 QIYQRSKPMEENFGKLIVLPIYSSLPTEQQTMIFQPTPPGQRKVVVATNIAETSITIDGI 634 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS- 419 +YV+DPG + RY RT + L + PIS+A+ANQRKGR GR + G CIRLY+ED + + Sbjct: 635 RYVVDPGLVKEMRYDPRTGMDTLEVVPISKAAANQRKGRAGRTAAGKCIRLYTEDSYNNE 694 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 E T PEI R+N+A V L M +G+ D+ F F++ P + I D + L LGA+ + Sbjct: 695 MKETTIPEIQRSNMAMVALDMKVIGIDDLIGFDFMDKPPTKIIIDALDQLYTLGALDEEG 754 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 LTPLGR +S+ ++P+LA+M++ + GC E +++ + LS+Q RP KQ Sbjct: 755 N-----LTPLGRDMSKFSLNPQLAKMLIMSSMLGCSEEVLVLVAILSVQGIWYRPRKKQA 809 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +D R + E D + ++++ + C+ +Y++Y ++ +D+ T Sbjct: 810 EADAMKARLNRDEGDHMTLLHVFREWQ------KNGEREAWCKENYVHYRSLKRAKDVMT 863 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 QLRQ +++ +P+ S E I A+++G + + + T + IFPGS Sbjct: 864 QLRQQMEQFHVPLVSCGKEIIPILKAIVSGFFAKAARRYMGTEYKTIVDDHPVYIFPGSA 923 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 LF + P++ + ELV T+R + R +DP W+ +A ++ R + Sbjct: 924 LFGREPEYCVFHELVNTTREYMRNTVAVDPRWLVELAPAFYRKASPLEMTSRKRA 978 >UniRef50_O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=75 Tax=Eukaryota RepID=DHX16_HUMAN Length = 1041 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 228/653 (34%), Positives = 367/653 (56%), Gaps = 31/653 (4%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQP 130 +LPV ++++L AI +HQV+I+ GETGSGKTTQ+P+ E G KG+ I TQP Sbjct: 394 AVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQP 453 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA +VA R+A E+ + G +GY +RF D S+ T+++ MTDG+LL E + L Sbjct: 454 RRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLAS 513 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y +++DEAHER+L+ D L G +K++ RP+LK+++ SAT+D RFS F++AP+ + Sbjct: 514 YSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIP 573 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADA 309 GR +PV++ Y E D L+A +V ++ + GDIL+F++G+ EI + Sbjct: 574 GRRFPVDIFY------TKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEM 627 Query: 310 LNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIK 361 L +R +LP+YA L + Q R+FQ R++V+ATN+AETSLT+ GI Sbjct: 628 LQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGII 687 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-R 420 YV+DPG + Y+ RT ++ L + P S+ASANQR GR GRV+ G C RLY+ + Sbjct: 688 YVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHEL 747 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 E T PEI RT+L +V+L + +LG+ D+ F F++ P + + L LGA+ Sbjct: 748 EETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALN---- 803 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQ 539 +LT GR++++LPVDP L++M+L ++K+ C E + + + LS+ + RP DK Sbjct: 804 -HLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVV 862 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +D F D L +N++ E S + C +++ + +R +D+ Sbjct: 863 HADNARVNFFLPGGDHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVRE 916 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 QL +++ + + ++S +Y + A+ G H T + I P S Sbjct: 917 QLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSS 975 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK-RTYSEPHWER 711 LF++ P+W++ ELV T++ + R I+ W+ VA H K + +PH ++ Sbjct: 976 LFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKK 1028 >UniRef50_B6AHK6 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AHK6_9CRYT Length = 1052 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 228/719 (31%), Positives = 371/719 (51%), Gaps = 72/719 (10%) Query: 49 EMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTT 108 E + L + + R LPV K+++L I +H +V+V GETGSGKTT Sbjct: 280 EYYYNAEINDNNELYKASYRDMQQVRKTLPVFAMKEELLNLIYEHPIVVVVGETGSGKTT 339 Query: 109 QLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNT 168 QL + E G G+I TQPRR+AA +VA R++EE+ + G +GY +RF D S T Sbjct: 340 QLTQYLYEAGYSNYGIIACTQPRRVAAVSVAKRVSEEMNVKLGTKVGYTIRFEDLTSKET 399 Query: 169 MVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIIT 228 ++K MTDG+L+ E D L +Y +I+DEAHERSL+ D L G K +L RR D ++I+T Sbjct: 400 VIKYMTDGVLMRESLTDPELERYSVVIMDEAHERSLSTDVLFGIFKSILRRRRDFRLIVT 459 Query: 229 SATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE 288 SAT+D ++FS F API E+ GRT+PV ++Y E D ++++ ++ Sbjct: 460 SATMDSDKFSNFFGRAPIFEIPGRTFPVTIQYLRTQSE------DYIESVVRQCLQIHCS 513 Query: 289 SH----------------GDILIFMSGEREIRDTADA-------LNKLNLRHTEILPLYA 325 GDILIFM+G+ +I T L + + +LP+Y+ Sbjct: 514 DMRCNLQKSGNSEEISNGGDILIFMTGQEDIEATCWLIAEKMSFLVEDGVSPLLVLPIYS 573 Query: 326 RLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPI 385 +L + Q ++FQ R++++ATN+AETSLT+ GI++VID G ++ Y+ + + L + Sbjct: 574 QLPSDLQIKIFQPSIYRKVIVATNIAETSLTLQGIRFVIDCGFCKVKVYNPKIGMDSLQV 633 Query: 386 EPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALG 444 PISQA+A QR GR GR + GIC R+Y+E FL PEI RTNLA+V+L + LG Sbjct: 634 VPISQANAQQRSGRAGRTAPGICYRMYTEKAFLGEMLTSNIPEIQRTNLANVVLLLKTLG 693 Query: 445 LGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLAR 504 DI +FPF++AP + +I + L LGA+ D LT +G +++ P+DP LA+ Sbjct: 694 FNDILSFPFMDAPSESSILTSLYQLWSLGALDDDGN-----LTNIGNLMAKFPLDPPLAK 748 Query: 505 MVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNY 564 ++ A + C+ E ++I + LS+ RP +++ SD +F ESD L +N++ Sbjct: 749 TLITASELNCISEIIVIVAILSVPTIFFRPRGREEESDATREKFVVPESDHLTLLNVYLQ 808 Query: 565 LGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ--------------------- 603 N + C +L++ +++ QD++ Q+++ Sbjct: 809 W------KRHNYNPKWCEKHFLHHKALKKAQDVFYQIKELYLNVMKDPYLIQKGISNKYN 862 Query: 604 --VVKELGIPVNSEPA----EYREIHIALLTGLLSHIGMKDADKQEYTGARNA-RFSIFP 656 +++ I + EP ++ + ++ +G + K EY R + + P Sbjct: 863 NLIIESHEISTSLEPTLDIKKWDNVRKSICSGCFHNSA-KIRGIGEYVNLRTSMPAYLHP 921 Query: 657 GSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 S L+ P +++ E++ T + + ++PEW+ VA L + S + R Sbjct: 922 SSSLYNCGYIPDYIVYHEVIVTVKEYMNTVTSVEPEWLNEVAPKLFSLSTSNLNNNRKS 980 >UniRef50_B3L2J4 Atp-dependant rna helicase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L2J4_PLAKH Length = 857 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 236/657 (35%), Positives = 368/657 (56%), Gaps = 33/657 (5%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 E + LP K++ L+ + + V+I+ G+TGSGKTTQ+ + +E K Sbjct: 193 SERYLQLLEEKKKLPAWSAKKNFLKLFKKNDVLIIVGDTGSGKTTQISQFVLESKFAEKK 252 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 I TQPRR+AA +VA R++EEL E G +GY +RF D S T++K +TDG+LL E Sbjct: 253 SIAVTQPRRVAAMSVAARVSEELDVELGTYVGYTIRFEDRSSTKTVIKYLTDGMLLRESM 312 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D LL +Y+TII+DEAHER+L D L G +K + +R DLK+I+ SAT+D +F + FN Sbjct: 313 YDPLLKRYNTIILDEAHERTLATDILFGVIKNIQEQRNDLKLIVMSATLDAGKFQKFFNG 372 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGERE 302 + I+ + GR YPVE+ Y E+D ++ + V ++ E GDIL+F++GE E Sbjct: 373 SQILNIPGRLYPVEIFY------TLQAEKDYIRVVIRTVYDIHVNEEEGDILVFLTGEEE 426 Query: 303 IRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHS---------GRRIVLAT 348 I T + KL N +LPLY+ L +++Q ++F+ GR+ +L+T Sbjct: 427 IEMTKKEIEKLVSKNENAGQLVVLPLYSSLPSTQQQKIFEPAPKPRFKGDKMGRKCILST 486 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLT+ GI YVIDPG ++ Y+ R +V+ L I PIS+ASA QR GR GR G C Sbjct: 487 NIAETSLTIEGIVYVIDPGFSKQKVYNPRARVESLLIAPISKASAQQRAGRAGRTKPGKC 546 Query: 409 IRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 RLY+E F PE T PEILR+NL SV+L + LG+ D+ F F++ P + + Sbjct: 547 FRLYTEKCFEQTLPEQTYPEILRSNLGSVVLNLKKLGIDDLVHFDFMDPPAPETLMRALE 606 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L LGA+ + + LT G +S+ PVDP+LA++++E+ + C E + I + LS+ Sbjct: 607 QLNYLGALDDEGE-----LTQKGHFMSEFPVDPQLAKVLIESPNYCCSSEILTIAAMLSV 661 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 RP K + +DE RF + D L +N+++ + + NA ++ C +LN Sbjct: 662 PYCFLRPKVKGKEADEMKTRFSHLDGDHLTLMNVFHAFVNYSR-MDINASKKFCYDYFLN 720 Query: 588 YLRVREWQDIYTQLRQVVKELGIPV----NSEPAEYREIHIALLTGLLSHIGMKDADKQE 643 + + Q++ QL + ++++ + + S P Y I ALL+G + K + Sbjct: 721 HRAMTSAQNVRNQLIRTMEKMELKIVSMNPSHPDYYVNIRKALLSGFYQQVAYKTSKGYY 780 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 T ++ P S +F+ P+WVM EL+ T++ + R +RID +W+ +A+ Sbjct: 781 ITVKDIQIVTLHP-STVFQINPEWVMYHELILTTKNFIRTVSRIDGKWLLEIARSYY 836 >UniRef50_Q9P774 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 n=1 Tax=Schizosaccharomyces pombe RepID=PRP16_SCHPO Length = 1173 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 233/705 (33%), Positives = 375/705 (53%), Gaps = 38/705 (5%) Query: 31 LHGVKKVKNPDAQQAI-FQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 + G+K + DA+ ++A +Q+ K + + LP ++ +L Sbjct: 445 VMGLKDSNDEDAKAGTTPVKVAGRSEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSV 504 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 IRD+QV+IV GETGSGKTTQL + E G G+IG TQPRR+AA +VA R++EE+ Sbjct: 505 IRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVR 564 Query: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY +RF D +T++K MTDG+LL E L +Y II+DEAHERSLN D L Sbjct: 565 LGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDIL 624 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 +G LK++L RR D+K+++TSAT++ ++FS F AP + GRTYPV++ + A Sbjct: 625 MGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMF------AKA 678 Query: 270 TERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPL 323 D ++A V ++ + GDIL+FM+G+ +I T + + + ILP+ Sbjct: 679 PCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPI 738 Query: 324 YARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 Y+++ Q ++F S R++V+ATN+AETSLTV GI YV+D G ++ Y+ + + Sbjct: 739 YSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGID 798 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EFTDPEILRTNLASVILQM 440 L + PISQA+ANQR GR GR GI RLY+E ++ E T PEI RTNL++ +L + Sbjct: 799 TLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLIL 858 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 +LG+ +I+ F F++ P + + L LGA+ + KLT LG+++S P+DP Sbjct: 859 KSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALD-----NFGKLTTLGKKMSLFPMDP 913 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 L+++++ A+ + C E + I S LS+ RP ++ + SD +F+ ESD L +N Sbjct: 914 SLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVPESDHLMLLN 973 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 ++ + + C +L+ ++ +DI QL +++ + I + S +++ Sbjct: 974 IYQHWQR------NGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLES-VSDWD 1026 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGAR-NARFSIFPGSGLF--KKPPKWVMVAELVETS 677 + L + H EY R + S L+ P +V+ ELV TS Sbjct: 1027 IVRRVLCSAYF-HQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTS 1085 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKV 722 + + I +DP W+ ER + + ++V Sbjct: 1086 KEYMNIVTSVDPYWLAEFGGVYYSVK------ERFRNETESYDRV 1124 >UniRef50_B6JZW3 ATP-dependent RNA helicase Prp16 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JZW3_SCHJY Length = 1176 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 230/682 (33%), Positives = 360/682 (52%), Gaps = 36/682 (5%) Query: 34 VKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDH 93 +KK P + ++ + + +V R + LP ++ +L IRD+ Sbjct: 457 MKKTPEPSRARKNHDDLPSKKELPIARVKSLREQR------ELLPAFAVREQLLSIIRDN 510 Query: 94 QVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGC 153 QV +V GETGSGKTTQL + E G+G G+IG TQPRR+AA +VA R++EE+ + G Sbjct: 511 QVTVVVGETGSGKTTQLAQFLYEDGQGKLGMIGCTQPRRVAAMSVAKRVSEEMGVQLGTL 570 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY +RF D S T++K MTDG+LL E L +Y II+DEAHERSLN D L+G L Sbjct: 571 VGYSIRFEDVTSPQTIIKYMTDGVLLRESLVQNDLDRYSVIIMDEAHERSLNTDILMGLL 630 Query: 214 KELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 + +L RR DLK+I+TSAT++ +RFS F AP + GRTYPV+V + D Sbjct: 631 RTILSRRRDLKLIVTSATMNAQRFSEFFGGAPQFTIPGRTYPVDVLFSKA------PCSD 684 Query: 274 QLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARL 327 ++A V ++ + GDIL+FM+G+ +I T D + + + +LP+Y+++ Sbjct: 685 YVEAAVRQVLQIHVSQPAGDILVFMTGQEDIEVTCDVIKERLAQLTDAAPLSVLPIYSQM 744 Query: 328 SNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPI 385 Q ++F + R++V+ATN+AETSLTV GI YV+D G ++ Y+ + + L I Sbjct: 745 PADLQTKIFDAAEPGVRKVVVATNIAETSLTVDGISYVVDTGFCKLKMYNAKMGIDTLQI 804 Query: 386 EPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP-EFTDPEILRTNLASVILQMTALG 444 PISQA+ANQR GR GR G+ RLY+E F+ + T PEI RTNL++ +L + +LG Sbjct: 805 TPISQANANQRSGRAGRTGPGVAYRLYTESAFVREMFQTTLPEIQRTNLSNTVLLLKSLG 864 Query: 445 LGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLAR 504 + +I F F++ P + L LGA+ + LT LG +++ P+DP LA+ Sbjct: 865 VKNIMDFDFMDRPPAATLTTSSYELWTLGALD-----NFGNLTALGSKMANFPMDPSLAK 919 Query: 505 MVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNY 564 +++ A ++GC E + I S LS+ RP ++ + SD +FH ESD L +N++ Sbjct: 920 LLIIAAEYGCSNEVLTIVSMLSVPSVFYRPKERLEESDAAREKFHVPESDHLTLLNIYLQ 979 Query: 565 LGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI 624 ++ C +L+ + + I QL ++K +P+ S +++ I Sbjct: 980 WER------NHCSVAWCTKHFLHSRSLSRARSIRDQLLDIMKFQKLPIVSCKSDWDVIRK 1033 Query: 625 ALLTGLLSHIGMKDADKQEYTGAR-NARFSIFPGSGLF--KKPPKWVMVAELVETSRLWG 681 L + + EY R + S L+ P +V+ ELV TS+ + Sbjct: 1034 VLCSAYF-NQAATAKGIGEYVHLRTGMPCHLHATSSLYGLGYLPDYVIYHELVLTSKEYM 1092 Query: 682 RIAARIDPEWVEPVAQHLIKRT 703 + +DP W+ Sbjct: 1093 NVVTSVDPYWLAEFGGAFYTLK 1114 >UniRef50_Q7XIR8 Os07g0508000 protein n=4 Tax=Embryophyta RepID=Q7XIR8_ORYSJ Length = 1280 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 227/682 (33%), Positives = 368/682 (53%), Gaps = 36/682 (5%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 + + ++A F + K +A ++ + Y LP+ + D+L+ +R++Q Sbjct: 544 DQGEIDFKEEAKFSQHMKVKAEAVSDFAKSKSLSQQRQY---LPIFTVRDDLLQVVRENQ 600 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 VV+V GETGSGKTTQL + E G G++G TQPRR+AA +VA R++EE++TE G + Sbjct: 601 VVVVVGETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKV 660 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D S NT++K MTDG+LL E +D L +Y I++DEAHERSLN D L G LK Sbjct: 661 GYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILK 720 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 +++ RR D K+I+TSAT++ ++FS+ F P+ + GRT+PV + + E D Sbjct: 721 KVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNIMFSKTPCE------DY 774 Query: 275 LQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN----------LRHTEILPL 323 ++A + GDILIFM+G+ EI T AL + + ILP+ Sbjct: 775 VEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISSSTKTVPKLSILPI 834 Query: 324 YARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 Y++L Q ++FQ R+ ++ATN+AETSLTV GI YVID G ++ Y+ R + Sbjct: 835 YSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMD 894 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQM 440 L + P+S+A+A+QR GR GR G C RL++E + + PEI RTNL +V+L + Sbjct: 895 ALQVFPVSRAAADQRAGRAGRTGPGTCYRLFTESAYQNEMLPNPVPEIQRTNLGNVVLLL 954 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 +L + ++ F F++ P + NI + + L LGA+ + LT +G ++ + P+DP Sbjct: 955 KSLKVENLLDFDFMDPPPQENILNSMYQLWVLGALN-----NVGALTVIGWKMVEFPLDP 1009 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 LA+M+L ++ C+ E + I S LS+ RP D+ + SD +F ESD L +N Sbjct: 1010 TLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLN 1069 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 ++ S+ C +L+ +R+ +++ +QL ++K L IP+ S E+ Sbjct: 1070 VYLQW------KSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWD 1123 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSR 678 + A+ + + + + P S L+ P +V+ ELV T++ Sbjct: 1124 VVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTK 1183 Query: 679 LWGRIAARIDPEWVEPVAQHLI 700 + + +DP+W+ + Sbjct: 1184 EYMQCVTAVDPQWLAELGPMFF 1205 >UniRef50_A7AVM7 DEAH box RNA helicase, putative n=3 Tax=Piroplasmida RepID=A7AVM7_BABBO Length = 1016 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 233/686 (33%), Positives = 367/686 (53%), Gaps = 38/686 (5%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 + N Q M +I ++ L E+ + + LPV + + ++L I Q Sbjct: 287 DQPDNSANDSKYSQFMDTDIPESELCERLSESKKKLRETREQLPVFKCRDELLSYIGQFQ 346 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 V++V GETGSGKTTQL + E G +G+IG TQPRR+AA +V R+A E+ + G + Sbjct: 347 VMVVVGETGSGKTTQLAQFLYESGYYKRGVIGCTQPRRVAAVSVCQRVAAEMGSRVGDLV 406 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D S NT VK MTDGILL E D L +Y II+DEAHERSLN D L G LK Sbjct: 407 GYSIRFEDLTSRNTAVKFMTDGILLRETLMDPDLDRYSCIIMDEAHERSLNTDVLFGILK 466 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 ++ RR D+++I+TSAT+D ++F+R F N PI ++ GRT+PV + Y + D Sbjct: 467 SVVARRRDIRVIVTSATMDADKFARFFGNCPIYKIPGRTFPVRIEYMRSMGN------DY 520 Query: 275 LQAIFDAVDELS-QESHGDILIFMSGEREIRDTADAL-----------NKLNLRHTEILP 322 +++ D L E GD+LIFM+G+ +I T + L + +L+ +LP Sbjct: 521 VESAVDKCVSLHISEGPGDVLIFMTGQDDINATCELLDLKLYKVMQSTTRADLQPFCVLP 580 Query: 323 LYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 +Y++L + Q RVF+ + R+++++TN+AETSLT+ GIK+VID G ++ Y+ + + Sbjct: 581 IYSQLPSELQQRVFKKYPYRKVIVSTNIAETSLTLDGIKFVIDSGFCKLKVYNPKVGMDS 640 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMT 441 L I P+SQA ANQR GR GR + GIC RLY+E +L+ E PEI+RTNL +V+L + Sbjct: 641 LQITPVSQAGANQRSGRAGRTAPGICYRLYTERTYLNDLFENNVPEIMRTNLCNVVLLLK 700 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 +L + + F F++ P NI + L LG I +LT +GR+L P++P Sbjct: 701 SLKVKRLTEFDFIDPPHAENILSAMLQLWILGGIDE-----FGELTDIGRKLVHYPLEPP 755 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPR----ERPMDKQQASDEKHRRFHDKESDFLA 557 L++M++ + C+ E + + S +S + E ++ A + +F ESD L Sbjct: 756 LSKMMIAGESERCMSEILTVVSVMSAPNVFVVENETDAQRESADNATREKFMVPESDHLT 815 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA 617 +N++ ++ S C L +R ++ QL +V + GI S Sbjct: 816 LLNVYKQWCANGRSDS------WCLQYRLQPKSLRRAAEVRQQLLDIVTKQGIEETSCGT 869 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARN-ARFSIFPGSGLFKK--PPKWVMVAELV 674 + ++ A+ +G + K EY+ R+ A + P S L+ P +V+ E+V Sbjct: 870 NWDQVRRAICSGYFHN-ASKLKGLGEYSNLRSFAPCFLHPTSALYGMGYTPDYVVYHEVV 928 Query: 675 ETSRLWGRIAARIDPEWVEPVAQHLI 700 TS+ + R +D EW+ + + Sbjct: 929 ITSKEYMRHVTAVDAEWLYELGPNFF 954 >UniRef50_C4JEY7 ATP-dependent RNA helicase DHX8 n=25 Tax=cellular organisms RepID=C4JEY7_UNCRE Length = 1446 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 249/696 (35%), Positives = 382/696 (54%), Gaps = 40/696 (5%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIR 91 ++ + P +++ +A++ID A K E R +LP+ Q ++++L+AI Sbjct: 417 SKLEGDRKPLSKEQRL--LAQQIDAAEKKAASIEETRK------SLPIYQFREELLQAIA 468 Query: 92 DHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVANRIAEELKTEP 150 DHQ++I+ GETGSGKTTQ+P+ E G G+ IG TQPRR+AA +VA R+AEE+ + Sbjct: 469 DHQIIIIVGETGSGKTTQIPQYLHEAGYTKGGMKIGCTQPRRVAAMSVAARVAEEMGVKV 528 Query: 151 GGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLL 210 G +GY +RF D SD T++K MTDG+LL E+ + L QY ++IDEAHER++ D Sbjct: 529 GNEVGYAIRFEDATSDKTILKYMTDGLLLKELLTEPDLSQYAALMIDEAHERTVPTDIAC 588 Query: 211 GYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDT 270 G LK++ RPDLK++I+SATID ++F ++F++API + GR YPV++ Y Sbjct: 589 GLLKDIAKARPDLKLLISSATIDAQKFQKYFDDAPIFNIPGRRYPVDIHY------TSQP 642 Query: 271 ERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPL 323 E + L A V ++ + GDIL+F++G+ EI L + + I P+ Sbjct: 643 EANYLAAAITTVFQIHITQGRGDILVFLTGQEEIEAAEQNLQETARKLGGKVPEMIICPI 702 Query: 324 YARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 YA L + Q ++F+ R++VLATN+AETSLT+ GI YVIDPG + + ++ RT ++ Sbjct: 703 YANLPSELQTKIFEPTPPGARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGME 762 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQM 440 L + P S+ASA QR GR GRV G C RLY++ + + T PEI RTNL+SV+L + Sbjct: 763 SLVVTPCSRASAGQRAGRAGRVGPGKCFRLYTKWAYHNELEANTTPEIQRTNLSSVVLML 822 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 +LG+ D+ F F++ P + + L LGA+ + LT +GRQ+++ P DP Sbjct: 823 KSLGIDDLLDFDFMDPPPAETLIRALEQLYALGALNDHGE-----LTKIGRQMAEFPTDP 877 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDEKHRRFHDKE-SDFLAF 558 LA+ +L A K+GCV E + I + L RP DK+ +D RF K+ D L+ Sbjct: 878 MLAKAILAAGKYGCVEEILSIIAMLGEASALFYRPKDKKIHADSARARFTVKDGGDHLSL 937 Query: 559 VNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE 618 +N+WN + S+ R ++L + +D+ QL ++ + + V++ A Sbjct: 938 LNIWNQW------VDSDFSYVWARENFLQQRSLTRARDVRDQLAKLCDRVEVAVSTAGAN 991 Query: 619 Y-REIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFPGSGLFKKPPKWVMVAELVET 676 I A+ G + Y T + P S LF+ PKWV+ ELV T Sbjct: 992 NLVPIQKAITAGFFPNAARLQRGGDSYWTVKNGQTVYLHPSSTLFEVNPKWVIYHELVLT 1051 Query: 677 SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 S+ + R + PEW+ VA H K+ E R Sbjct: 1052 SKEYMRSNMPLQPEWLVEVAPHYHKQKDLETLANRK 1087 >UniRef50_D2JWV9 Putative pre-mRNA splicing factor n=1 Tax=Filobasidiella depauperata RepID=D2JWV9_9TREE Length = 1087 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 221/641 (34%), Positives = 341/641 (53%), Gaps = 54/641 (8%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 +LP+ + + ++ AIRD+Q+++V G+TGSGKTTQ+ + E G +G +G TQPR Sbjct: 444 EQRKSLPIYKLRDQLVAAIRDNQILVVVGDTGSGKTTQMAQYLAEEGFLERGRLGCTQPR 503 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 ++AA +VA R+AEE+ G +GY +RF D S T +K MTDG+LL E+ D +Y Sbjct: 504 KVAAVSVAKRVAEEVGCRLGAEVGYTIRFEDMTSLETKIKYMTDGMLLRELLVDPDCSKY 563 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 +++DEAHER++ D L G LK+ RRPDLK+I TSAT+D +F+ +F PI + G Sbjct: 564 SVLMLDEAHERTIATDVLFGLLKKACKRRPDLKLICTSATLDAAKFATYFWGCPIFTIPG 623 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADAL 310 R +PVE Y + E D L+A + ++ E GDIL+F++G+ EI + L Sbjct: 624 RAFPVETLY------TKEPEPDYLEASLITILQIHLMEPPGDILLFLTGQEEIDTACEIL 677 Query: 311 NKL------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKY 362 + + ILP+YA L + Q+R+F+ R++V+ATN+AETS+T+ GI Y Sbjct: 678 YERVKALGPQVPELLILPVYAALPSEMQSRIFEPAAPGARKVVIATNIAETSITIDGIYY 737 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RP 421 VIDPG A+ + Y + + L + PISQA A QR GR GR G C RLY+E + + Sbjct: 738 VIDPGFAKQNAYDPKLGMDSLIVTPISQAQARQRAGRAGRTGPGKCYRLYTEIAYRNEML 797 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PEI RTNLAS IL + A+G+ D+ +F F++ P + + L LGA+ + Sbjct: 798 PNPIPEIQRTNLASTILTLKAMGINDLISFDFMDPPPAATMLTALEQLYALGALDDEGL- 856 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQA 540 LT +GR+++ P+DP L++M++++ +GC EA+ I + L RP DKQ Sbjct: 857 ----LTRIGRKMADFPLDPPLSKMLIKSVDYGCSEEALTIVAMLQAGGQVFYRPKDKQAQ 912 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +D K +FH E D L + ++N +S C +++ ++ QD+ Sbjct: 913 ADAKKAKFHQAEGDLLTLLTVYNGW------KNSKFSNPWCFENFIQTRAMKTAQDVRK- 965 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L S + D + T SI P S L Sbjct: 966 -------------------------LALTQSSPPSVSDPSEGYKTLVEGTPVSIHPSSAL 1000 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 F++PP+W + ELV T++ + I+P+W+ VA + Sbjct: 1001 FQRPPEWCVYYELVLTAKEYMHQVTAIEPKWLSDVAPTFFR 1041 >UniRef50_Q55CD3 DEAD/DEAH box helicase n=2 Tax=Eukaryota RepID=Q55CD3_DICDI Length = 730 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 218/688 (31%), Positives = 371/688 (53%), Gaps = 40/688 (5%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY-PDNLPVSQKKQDILEAIRDHQVV 96 K P Q I + + + ++ + + EI ++LPV K +L+ ++H V Sbjct: 33 KKPVQLQQISNDKINDNNNLKNQLEIPKEIPKEIKLQKESLPVFTAKDALLKNFKEHSTV 92 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 I+ ETG+GKTTQ+P+ E G G+I TQPRR+AA +++ R+++E+ E G +GY Sbjct: 93 IIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRRVAAVSISKRVSQEMGVELGDQVGY 152 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 VRF D ++ T +K MTDG+L+ E D L +Y II+DEAHER+LN D L G LK + Sbjct: 153 CVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSI 212 Query: 217 LPRRPD---LKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 RR LKIII SAT+D E FS++FNNAP++ + GR +PV++ Y ++ ++D Sbjct: 213 QKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYY------TEEIQKD 266 Query: 274 QLQAIFDAVDELS-------------QESHGDILIFMSGEREIRDTADALNKLNLR---- 316 + A V ++ +E GDIL+F++G EI + L R Sbjct: 267 YVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVG 326 Query: 317 --HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 + P+++ L +Q +VF+ R+++LATN+AETSLT+ GI+YV+D G + Sbjct: 327 SKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSK 386 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 ++ + + L I PIS+ASA QR GR GR EG C RLY+++ F + PEI R+N Sbjct: 387 IFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSN 446 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 +A+VILQ+ +G+ DI +F F+E+P ++ + LL L AI+ + LT LG++ Sbjct: 447 IANVILQLKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNG-----SLTELGKK 501 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 ++ P+DP ++ ++++ + C E +II S LS++ P +K++ ++ + F + Sbjct: 502 MALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESIFFTPKEKKKEVEDVKKIFFSPD 561 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 D + F+N++ + + ++ C ++N + + +++ QL + L +P+ Sbjct: 562 GDHITFLNVFREFQKSK----PQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPI 617 Query: 613 NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAE 672 S +++ I + + G + + DK+ T N I P S LF + P+ ++ E Sbjct: 618 VSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHILYNE 677 Query: 673 LVETSRLWGRIAARIDPEWVEPVAQHLI 700 L T++ + R I+ W+ + Sbjct: 678 LTITTKAFARNIIPIEGSWLAEICPKYY 705 >UniRef50_Q03319 Probable ATP-dependent RNA helicase prh1 n=2 Tax=Schizosaccharomyces RepID=PRH1_SCHPO Length = 719 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 238/719 (33%), Positives = 383/719 (53%), Gaps = 46/719 (6%) Query: 15 RLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ--------AIFQEMAKEIDQAAGKVLLREA 66 + L D L +R+ K KN A + ++ + ++ D A +V+ + Sbjct: 13 SITKQNLTDGLVGGQRIKAPNKKKNRKASKNTTKKSTVSVVNFLEQDTDFGANEVVGSDN 72 Query: 67 ARPE-------------ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKI 113 + PE + NLP+ + + + I+D++V++V GETGSGK+TQ+P+ Sbjct: 73 SSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQF 132 Query: 114 CMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLM 173 E +G + TQPRR+AA +A R+A E G +GY +RF D S T +K + Sbjct: 133 LNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYL 192 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATID 233 TDG+LL E+ D +L QY T+I+DEAHER+L D LLG++K+++ +RP L++II SAT++ Sbjct: 193 TDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLN 252 Query: 234 PERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGD 292 ERFS F+ A I +SGR YPV++ Y E D L A + +L + GD Sbjct: 253 AERFSEFFDGAEICYISGRQYPVQIHY------TYTPEPDYLDACLRTIFQLHTKLPPGD 306 Query: 293 ILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRI 344 IL+F++G+ EI + NL + PL+A L +Q +VF + R++ Sbjct: 307 ILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKV 366 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VL+TN+AETS+T+ GI+YVID G A+I +++ + ++ L ++PISQ++A QR GR GR + Sbjct: 367 VLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREA 426 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 G C R+Y+E DF P+ T PEI R +L+ +L + A G D+ F +++ P K + Sbjct: 427 AGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLR 486 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 + L +GA+ + + LG Q+S +P+ P LAR VL A++H C+ E + + S Sbjct: 487 ALEHLYSIGALDDNG-----HINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSC 541 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LS P +K+ + E +F E D L +N E S ++ ++ C + Sbjct: 542 LSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLES----SHDSRKQWCSQN 597 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEP-AEYREIHIALLTGLLSHIGMKDADKQE 643 ++N ++ DI QLR+ + G +NS P + ++ L+G +++ + D Sbjct: 598 FINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGSY 657 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 T N SI P S LF K + +M ELV T++ + R + I W+ VA H + R Sbjct: 658 RTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLAR 716 >UniRef50_B0ECA9 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative n=2 Tax=Entamoeba RepID=B0ECA9_ENTDI Length = 845 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 223/666 (33%), Positives = 375/666 (56%), Gaps = 32/666 (4%) Query: 48 QEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 ++ ++I+ K+ R + + LP+ KK++I+ +I+++Q+ I+ GETGSGKT Sbjct: 200 NKIEEKIEDKEDKIEKRREIKK---IREELPIFFKKKEIIRSIKENQINIIIGETGSGKT 256 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+ + ME G G G IG TQPRR+AA +VA R++EE+ ++ G +GY +RF D S Sbjct: 257 TQIAQYLMEEGIGKNGKIGCTQPRRVAAVSVAQRVSEEVGSKLGEEVGYLIRFEDKTSKK 316 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 T +K MTDGILL E+ +D +L +Y II+DE HERSLN D L G +K ++ R DLK+II Sbjct: 317 TKIKFMTDGILLREVIKDPMLEEYSVIIMDEVHERSLNTDILFGIIKRIIQERNDLKLII 376 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS- 286 T+ATI+ + F PII + GRT+PV V Y T +D ++ + + Sbjct: 377 TTATINENKLIEFFGIIPIIHIEGRTFPVSVEYLKT------TPKDYIEMAIKQILSIHM 430 Query: 287 QESHGDILIFMSGEREIRDTADAL-------NKLNLRHTEILPLYARLSNSEQNRVFQSH 339 + GDIL+FM+G+ +I + + L + + EI+P+Y++LSN Q ++F Sbjct: 431 NQEKGDILVFMTGQEDIEVSCELLKEKYKEIKEEKKQEIEIIPIYSQLSNEAQKKIFIKS 490 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 + R+++++TN+AETSLTV GIKYVID G + Y+ + ++ L I P S+ +A QRKGR Sbjct: 491 NKRKVIISTNIAETSLTVKGIKYVIDSGLGKWKIYNPKIGMETLQIFPESKQNAEQRKGR 550 Query: 400 CGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 GR GIC RL++E+ F E PEI R+NL +VIL++ A+G+ DI ++ P+ Sbjct: 551 AGRTETGICYRLFTENTFKYELLESPIPEIQRSNLNNVILELKAIGINDINKIELIDKPN 610 Query: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518 + I + + L LGA+ +T LG+++ +LP++P L++MV+ +QK C++E Sbjct: 611 EERILNSMYELWILGALDE-----IGNITKLGKEMVELPLEPSLSKMVIISQKFECIKEV 665 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 + I + L++ + RP ++++ +D +F+ +SD + +N++N E ++ Sbjct: 666 LTIVAMLTVPNIFIRPKEREKEADISREKFYQPDSDHITLINVYNQWKEHEEN------E 719 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD 638 + C +Y+N + + +DI QL+ ++ + GI S ++ + + K Sbjct: 720 QWCNKNYINSKAMNKAKDIRNQLKDLINKKGINEISCGRNLDKLKKCITASYFYN-AAKL 778 Query: 639 ADKQEYTGARNARFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 K + I P S LF K+V+ EL+ T++ + R I+ +W+ + Sbjct: 779 KGKNYINLRTGVQCLIHPTSALFNMGFKSKYVIYHELLLTTKSYMRCITSIEGKWLPELG 838 Query: 697 QHLIKR 702 + K Sbjct: 839 EIFFKT 844 >UniRef50_A2EN72 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EN72_TRIVA Length = 890 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 232/650 (35%), Positives = 351/650 (54%), Gaps = 26/650 (4%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 LP+ ++ IL+ I ++ VVI+ GETGSGKTTQL + E G G G I TQPRR+ Sbjct: 186 RAKLPIMDFREKILKVISENSVVIIVGETGSGKTTQLTQFFYEDGYGKFGQIVCTQPRRV 245 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA ++A R+A+E+ E GG +GY +RF + +SD T++K MTDGILL E + L +Y Sbjct: 246 AACSIAKRVADEMGVELGGLVGYAIRFEEALSDKTIIKYMTDGILLRESLNEDDLYKYSV 305 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 II+DEAHER+LN D L G LK++L RR DLK+I+TSAT+D +FS++F API + GRT Sbjct: 306 IIMDEAHERALNTDVLFGVLKKILSRRSDLKVIVTSATMDASKFSKYFGGAPIFHIQGRT 365 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL 313 Y VE + + + +A+ A +ES GDILIFM+G+ ++ T + + Sbjct: 366 YDVEPFFL-----RSNPQDYVYEAVRQACSIHLKESPGDILIFMTGQDDVECTCQLIREH 420 Query: 314 -----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGT 368 N + P+Y++L +Q +VF++ R+ V+ATN+AETSLT+ GI+YVID G Sbjct: 421 LAKIENAPEMAVFPIYSQLPVEQQAKVFENLKIRKCVVATNIAETSLTIDGIRYVIDSGF 480 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPE 427 + YS + + L ++PISQA+A QR GR GR SEG C RL++E F T PE Sbjct: 481 CKQKSYSSKAGLDTLLVQPISQAAATQRMGRAGRTSEGKCWRLFTETSFKYEMLPMTIPE 540 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 + RTNLA+VIL + +LG D+ +F F++ P N + L L A+ + KLT Sbjct: 541 VQRTNLANVILLLKSLGFDDVLSFDFMDPPPLDNFLHAMNQLWSLRALD-----NEGKLT 595 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRR 547 LG+ + Q P+DP L++M+L K GC+ E + I S LS+ + +P +++ +D + Sbjct: 596 KLGKDMVQFPLDPTLSKMLLVGNKFGCLEEILTIVSMLSVSEIFYKPHGREEEADAMRMK 655 Query: 548 FHDKESDFLAFVNLWNYLGEQQ-----KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 F ESD L +N++N K + +L+ + + + DI QL Sbjct: 656 FLVPESDHLTMLNVFNLWFNAGLNRPTKKEQEQERAIFAKRHFLHNVTLCKALDIRQQLE 715 Query: 603 QVVKELGIPVNSEP-AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF 661 + + G+ ++ + + + + H Y + P S L Sbjct: 716 DIALQGGMKMSHCGLENWDIVRKVICSSYFHHAAHLKNLSTYYNIQTGVECIVHPTSSLA 775 Query: 662 KKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT--YSEP 707 P++++ ELV T R + IDP W+ +A T Y P Sbjct: 776 GLSYIPEYIVYHELVLTKRHYLHGVTAIDPLWLSQMAPEFFTATDLYGNP 825 >UniRef50_Q9H5Z1 Probable ATP-dependent RNA helicase DHX35 n=44 Tax=cellular organisms RepID=DHX35_HUMAN Length = 703 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 227/673 (33%), Positives = 370/673 (54%), Gaps = 42/673 (6%) Query: 55 DQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC 114 + V AA LPV + + IL I ++Q V++ GETG GK+TQ+P+ Sbjct: 32 NSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYL 91 Query: 115 MELGRGIKGLI-GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD-NTMVKL 172 E G +G + G TQPRR+AA TVA R+AEE G +GY +RF D T +K Sbjct: 92 AEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKF 151 Query: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATI 232 +TDG+L+ E+ D LL +Y I++DEAHER+L D +G LK++ +R DL++I+ SAT+ Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211 Query: 233 DPERFSRHFN----------NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAV 282 D ++F FN I+ V GRT+PV++ Y D +++ + V Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYL------QSPVPDYIKSTVETV 265 Query: 283 DELSQ-ESHGDILIFMSGEREIRDTADALNKLNL--------RHTEILPLYARLSNSEQN 333 ++ Q E GD+L F++G+ E+ L + RH +LP+YA L + EQ Sbjct: 266 VKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQM 325 Query: 334 RVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 +VF+ S S R++++ATNVAETS+T+ GI YVID G ++ Y+ RT ++ L + P+SQA Sbjct: 326 KVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQA 385 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAF 451 SANQR GR GR G C RLY+E+ F P+ T PE+ R+NLA VILQ+ ALG+ ++ F Sbjct: 386 SANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRF 445 Query: 452 PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQ 510 F+ P +++ + LL LG + D +LT PLG ++++ P++P A+M+LE+ Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKD-----CRLTEPLGMRIAEFPLNPMFAKMLLESG 500 Query: 511 KHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQK 570 GC +E + I + + IQ+ P +++ + HR+F +E D L +N++ Sbjct: 501 NFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF----- 555 Query: 571 ALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGL 630 + N + C+ +LNY + + QL++++ + +P S + + +++G Sbjct: 556 -IKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGF 614 Query: 631 LSHIGMKDADKQEYTGARNARFSIFPGSGLF-KKPPKWVMVAELVETSRLWGRIAARIDP 689 ++ + T + I P S L+ +KPP+WV+ E+++TS+ + R I+ Sbjct: 615 FANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 674 Query: 690 EWVEPVAQHLIKR 702 W+ +A H ++ Sbjct: 675 AWLLELAPHFYQQ 687 >UniRef50_C5X1W0 Putative uncharacterized protein Sb01g037170 n=2 Tax=Poaceae RepID=C5X1W0_SORBI Length = 692 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 225/665 (33%), Positives = 357/665 (53%), Gaps = 71/665 (10%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL-GRGIKGLIGHTQ 129 + LPV Q+K++ L ++RD+Q +I+ GETGSGKTTQ+P+ +E G + ++ TQ Sbjct: 59 LEKRRTLPVWQQKEEFLRSLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQ 118 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AA +V+ R+AEE+ G +GY +RF D S T++K +TDG+LL E D LL Sbjct: 119 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLE 178 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +Y I++DEAHER+L D L G LKE+L RPDLK+++ SAT++ E+F +F+ AP+++V Sbjct: 179 KYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKV 238 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTAD 308 GR +PVE+ Y + ERD L+A V ++ E GDIL+F++GE EI D Sbjct: 239 PGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACR 292 Query: 309 ALNKL------NLRHTEILPLYARLSNSEQNRVFQS---------HSGRRIVLATNVAET 353 +NK + +++PLY+ L + Q ++F+ GR+IV++TN+AET Sbjct: 293 KINKEINNMGDQVGTVKVVPLYSTLPPAMQQKIFEPAPAPLKEGGPPGRKIVVSTNIAET 352 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLT+ GI YVIDPG ++ Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+ Sbjct: 353 SLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYT 412 Query: 414 EDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 E F T PEILR+NLA+ +L + LG+ D+ F F++ P + + +L L Sbjct: 413 EKSFNEDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 472 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 GA+ + LT LG +S+ P+DP++++M Sbjct: 473 GALDDEGN-----LTQLGEMMSEFPLDPQMSKM--------------------------- 500 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 + Q+A+DE RF + D L +N+++ + +N + C +++N ++ Sbjct: 501 ---EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ------NNEDPQWCYENFINSRALK 551 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMKDADKQEYTGAR 648 ++ QL +++ + + S Y I A+L G + + T Sbjct: 552 SADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 611 Query: 649 NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPH 708 N + P + + K P+WV+ E V T+R + R I EW+ +A H + P Sbjct: 612 NQVVHLHPSNCMDHK-PEWVIYNEYVLTTRNFIRTVTDIGGEWLIDIAPHYYDLSNF-PS 669 Query: 709 WERAQ 713 E + Sbjct: 670 CEAKR 674 >UniRef50_C0H5K5 Splicing factor, putative n=2 Tax=Plasmodium falciparum 3D7 RepID=C0H5K5_PLAF7 Length = 1151 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 224/716 (31%), Positives = 370/716 (51%), Gaps = 70/716 (9%) Query: 42 AQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGE 101 + I+ + + K + + ++LP+ + K ++L+A+ ++ ++I+ GE Sbjct: 444 KKDKIYSSLFNIENNNKDKKNTLKDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGE 503 Query: 102 TGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFS 161 TGSGKTTQ+ + E G G+I TQPRR+AA +VA R++ E+ + G +GY +RF Sbjct: 504 TGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFE 563 Query: 162 DHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP 221 D+ + +T ++ +TDGILL E D+ L +Y II+DEAHERS+N D LLG LK + +R Sbjct: 564 DNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRN 623 Query: 222 DLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDA 281 DLK+I+TSATID ++FS F NAPI + GRT+ V + Y + +D +Q Sbjct: 624 DLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEY--LRTPCNDYIECAVQKAIQI 681 Query: 282 V--DELSQESHGDILIFMSGEREIRDTADALNKLNLRHTE-------------------- 319 D + GDILIFM+G+ +I T L++ E Sbjct: 682 HVSDNNYDNNFGDILIFMTGQEDINATCYLLSERFYEVYESYKESKNNKKDTINKIKNIL 741 Query: 320 --------------------------------ILPLYARLSNSEQNRVFQSHSGRRIVLA 347 I P+Y++LS+ +Q+++F+ + R+I+++ Sbjct: 742 NEDNNNNNNDSNIKKKVDGDNNTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYDLRKIIVS 801 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETSLT+ GIKYVID G ++ Y+ + L + PISQA+ANQR GR GR GI Sbjct: 802 TNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGI 861 Query: 408 CIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RLY+E+ FL + PEI R+NL++V+L + +L + ++ F F++ P K +I + + Sbjct: 862 CYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSL 921 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 L LGAI + LT +GR++ Q P+DP L+++V+ +Q C +E +II S LS Sbjct: 922 HELWVLGAINNEGN-----LTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLS 976 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 + ++ + K +F ESD L +N++ S N C +++ Sbjct: 977 SPSIFLESKENNESIESKKEKFTVPESDHLTLLNIYLQWR------SHNYSYSWCTKNFI 1030 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 Y + + +++Y+QL ++K L I S ++ I + +G + + + Sbjct: 1031 QYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINL 1090 Query: 647 ARNARFSIFPGSGLFK--KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 N + P S L+ P +V+ E+V T++ + R +DPEW+ + Sbjct: 1091 RTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFF 1146 >UniRef50_C4QXR9 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QXR9_PICPG Length = 967 Score = 780 bits (2014), Expect = 0.0, Method: Composition-based stats. Identities = 228/669 (34%), Positives = 360/669 (53%), Gaps = 34/669 (5%) Query: 48 QEMAKEIDQAAGKVLLREAARPE--ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSG 105 ++ ++I+ + +++ P LP ++D++ IR++Q+V+V GETGSG Sbjct: 264 KDKEEKIEHKNFIEAMEDSSSPLDIAEQRRCLPAFTVREDLIRTIRENQIVVVIGETGSG 323 Query: 106 KTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS 165 KTTQL + E G +G+IG TQPRR+AA +VA R++EE+ + G +G+ +RF D S Sbjct: 324 KTTQLTQFLYEEGFYKRGIIGCTQPRRVAAMSVAKRVSEEMGVKLGNEVGFTIRFEDRTS 383 Query: 166 DNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKI 225 TM+K MTDG+LL E D L +Y II+DEAHERSLN D LLG K++L +R DL++ Sbjct: 384 PRTMIKYMTDGVLLRETLLDSGLEKYSCIIMDEAHERSLNTDILLGLFKKILTKRRDLRL 443 Query: 226 IITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL 285 IITSAT++ RFS F NA + GRT+PV++++ D + A V ++ Sbjct: 444 IITSATMNASRFSEFFGNADTFTIPGRTFPVDIQFS------KYPVADYVDAAIKQVLKI 497 Query: 286 SQ-ESHGDILIFMSGEREIRDTADALNKL---------NLRHTEILPLYARLSNSEQNRV 335 + GDIL+FM+G+ +I T L + N ILP+Y+ L Q +V Sbjct: 498 HYGKKPGDILVFMTGQEDIEATCQVLQERIEEIEEDAENKNPLSILPIYSSLPADLQAKV 557 Query: 336 FQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 F R+ ++ATN+AETSLTV GI +V+D G ++ YS + + L + PIS A ANQ Sbjct: 558 FGRSEVRKCIVATNIAETSLTVDGIVFVVDAGLCKLKVYSSKLGMDILQLAPISFAQANQ 617 Query: 396 RKGRCGRVSEGICIRLYS-EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 R GR GR G+ RLY+ + PEI RTNLA+ +L + +LG+ ++ FPF+ Sbjct: 618 RSGRAGRTGPGVAYRLYTLTEAEKEMYVQPIPEIQRTNLANTLLLIKSLGVDNLLDFPFI 677 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 + P I + L L AI + LT LG +++ P++P L++M++++ + C Sbjct: 678 DPPPHATIYSSLYDLWCLDAID-----NLGALTDLGHKMTSFPMEPVLSKMLIKSHEFKC 732 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 E II + LS+ + RP ++Q+ SD RF ESD L +N++N L+ Sbjct: 733 STEMCIIVAMLSVPNVFYRPKERQKESDRSRERFFIPESDHLTLLNVYNQW------LNH 786 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 R C ++L+ +R Q+I QL+ ++ + G+ S ++ I + + L + Sbjct: 787 RNSARWCVQNFLHEKSLRRAQEIELQLQSIMMQQGMACRSIGRQWDPIQECICSCLFVN- 845 Query: 635 GMKDADKQEYTGARNAR-FSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEW 691 + EYT R+ + P S L+ P++V+ EL+ TSR + + + PEW Sbjct: 846 AARFKKFGEYTNLRSVMSMVLHPTSSLYGTADLPEYVVFQELLLTSREYMNVVTAVKPEW 905 Query: 692 VEPVAQHLI 700 + Sbjct: 906 LAKYGSVFY 914 >UniRef50_A9US44 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9US44_MONBE Length = 1322 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 239/699 (34%), Positives = 364/699 (52%), Gaps = 50/699 (7%) Query: 34 VKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDH 93 + A + F E KE D+ + LP+ +Q++L IRD+ Sbjct: 567 ADQEPEDHAAGSKFAEHMKEDDKEDNATSHFARTKTIKEQRQYLPIYAVRQELLNIIRDN 626 Query: 94 QVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGC 153 QV+I+ G+TGSGKTTQ+ + E G G G IG TQPRR+AA +VA R++EE+ E G Sbjct: 627 QVIIIVGQTGSGKTTQMTQYLYEAGYGDFGTIGCTQPRRVAAMSVAKRVSEEMGVELGKQ 686 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY +RF D S T++K MTDGILL E + L QY II+DEAHERSLN D L G L Sbjct: 687 VGYSIRFEDVTSRETVIKYMTDGILLRESLNEGDLDQYSAIIMDEAHERSLNTDVLFGLL 746 Query: 214 KELLP---------------------RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGR 252 ++++ RR DLK+I+TSAT+D +F+ F N P+ + GR Sbjct: 747 RDVVARCGTAAPRCVRPSHSRVPRCIRRRDLKLIVTSATMDSTKFATFFGNVPVFNIPGR 806 Query: 253 TYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDTADALN 311 T+PVEV + A + D ++ AI AV Q GD+LIFM+G+ +I T L Sbjct: 807 TFPVEVFF------AKNPVDDYVEAAIKQAVQIHLQPHPGDMLIFMTGQADIEATCSVLA 860 Query: 312 KL------NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 + ++ ILP+Y++L + Q ++F+ R+ ++ATN+AETSLTV GI +VID Sbjct: 861 ERLEALGEDVPPLSILPIYSQLPSDLQAKIFKKSDVRKCIVATNIAETSLTVDGIMHVID 920 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFT 424 G ++ Y+ + + L I PISQA+ANQR GR GR G RLY+E + + T Sbjct: 921 SGFCKLKCYNPKIGIDDLQIYPISQANANQRSGRAGRTGPGNAYRLYTEAIYKNELLPLT 980 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI RTNLA+V+L + +LG+ ++ F F++ P + I + + L LGA+ + Sbjct: 981 VPEIQRTNLANVVLLLKSLGVENLMDFHFMDPPPQETILNSMYNLWILGALD-----NTG 1035 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LTPLGRQ+ + P+DP ++M++ + C E + I S LS+ RP +++ SD K Sbjct: 1036 ALTPLGRQMVEFPLDPAQSKMLIVSADLECSSEILTIVSMLSVDKHFFRPPGREEESDLK 1095 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 +F ESD L +N + S+N +++ +R+ ++I QL + Sbjct: 1096 REKFAVPESDHLTLLNTYQQW------KSNNYSSSWASEHFIHAKSMRKVREIRMQLMDI 1149 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR-NARFSIFPGSGLFKK 663 +K +PV S + + + + H + EY AR + P S L+ Sbjct: 1150 MKSQKVPVISSGTSWDAVRKCICSAYFHH-AARLKGIGEYVNARTGMPAHLHPTSSLYGM 1208 Query: 664 --PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 P WV +LV T++ + + +DP W+ + Sbjct: 1209 GINPDWVCYHDLVMTTKEYMQFVTAVDPLWLAELGNIFF 1247 >UniRef50_Q759P9 ADR224Wp n=2 Tax=Saccharomycetaceae RepID=Q759P9_ASHGO Length = 1090 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 259/755 (34%), Positives = 377/755 (49%), Gaps = 67/755 (8%) Query: 17 DSLMLRDRLRFSRRLHGVKKVKNPDAQQ----------AIFQEMAKEIDQAAGKVLLREA 66 + RL RRL +K + + Q K + R++ Sbjct: 308 ANARRGSRLVAMRRLQKERKEHSAQTAAIVGTVVGNVLGVKQNDNKGTCDKTSSQVSRQS 367 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-I 125 LPV + K +L+ IRD+QV ++ GETGSGKTTQL + E G G I Sbjct: 368 FEDIQAQRRTLPVYEVKSQLLQVIRDNQVTVIIGETGSGKTTQLAQYLHEDGFCRLGKQI 427 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AA +VA R+A E+ E G +GY +RF D S +T +K MTDGILL E D Sbjct: 428 GVTQPRRVAAMSVAERVALEMGVELGKEVGYAIRFEDKTSADTRLKFMTDGILLRETLID 487 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 LL +Y II+DEAHERSLN D LLG+ K LL RR +LK+IITSAT++ +FS+ F +AP Sbjct: 488 DLLEKYACIIMDEAHERSLNTDVLLGFFKNLLTRRRNLKLIITSATMNASKFSQFFGDAP 547 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFD--AVDELSQESHGDILIFMSGEREI 303 + GRT+PV++ Y D ++A A LS GDILIFM+G+ +I Sbjct: 548 QFTIPGRTFPVQINY------TSYPVPDYVEAAVQQAASIHLSTSLLGDILIFMTGQEDI 601 Query: 304 RDTADALNKL---------------NLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVL 346 T DAL + L EILP+Y+ L Q R+F R+IV+ Sbjct: 602 EATCDALKERIVDMRVKRKGSIMQDILADVEILPIYSALPADIQGRIFNKSDAKKRKIVV 661 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATN+AETSLT+ GIKYVID G +++ Y+ R + L I PIS A+A QR GR GR G Sbjct: 662 ATNIAETSLTIDGIKYVIDCGYSKLKVYNPRIGLYNLAITPISLANAQQRSGRAGRTGPG 721 Query: 407 ICIRLYSEDD-FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 I RLY+E+ + PEI RT+LASV+L + +LG+ DI FPF+++P + Sbjct: 722 IAYRLYTENTAIADMHPQSIPEIQRTSLASVLLLLKSLGIEDIFNFPFMDSPPSATLMTS 781 Query: 466 VRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 + L LGA+ + LT +G ++++ P+ P L++++L + K+GC E + I S L Sbjct: 782 MFELWTLGALD-----NFGALTEMGSKMAKFPLQPSLSKILLLSAKYGCSEEMVTIVSML 836 Query: 526 SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY 585 S+ RP ++Q+ SD+ RF ESD L +N++ + +L CR +Y Sbjct: 837 SVPQIFYRPKERQKESDQARNRFVVPESDHLTLLNVFVQWKVHRYSLD------WCRKNY 890 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYT 645 L Y +R DI QL + + + +P+ S + + + + G + K Q Sbjct: 891 LQYRSLRRAYDIREQLIRAMLKEDVPIISSGSGWDILRKCICAGYVHQAARKSGLNQYVH 950 Query: 646 GARNARFSIFPGSGL--FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 + P S L P +V+ EL+ T++ + + +DP W+ Sbjct: 951 LKNGMELKLHPTSALAGMGDLPPYVVYHELLLTTKEYINLVTAVDPFWLMEYGALFYHVK 1010 Query: 704 Y-----------------SEPHWERAQGAVMATEK 721 + EP E V+A E+ Sbjct: 1011 FISNREVYGLYPEEQDQDGEPVSESLANRVVACEQ 1045 >UniRef50_Q6FTI2 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida glabrata RepID=Q6FTI2_CANGA Length = 1057 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 229/707 (32%), Positives = 365/707 (51%), Gaps = 51/707 (7%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI----------TYPDNL 77 + +K K A +++ + + I +L Sbjct: 282 RNQNDSAEKAKESTNLSGTSLGEALGLNKDSNILDNSRKTNKNIDKQTATEDVDKTRKSL 341 Query: 78 PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAAR 136 P+ + + ++L+ IRD+QV I+ GETGSGKTTQL + E G G LI TQPRR+AA Sbjct: 342 PIYKARANVLQMIRDNQVSILIGETGSGKTTQLAQYLYEDGYTRDGGLIACTQPRRVAAM 401 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+A+E+ + G +GY +RF D +T +K MTDGILL E D L +Y III Sbjct: 402 SVAKRVAQEMDKKVGDLVGYSIRFEDKTGPSTKIKFMTDGILLRETLIDENLEKYKVIII 461 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLN D LLG LK L+ RR D+KIIITSAT+D +FS+ F P +V G+TYPV Sbjct: 462 DEAHERSLNTDVLLGLLKNLVKRRRDIKIIITSATLDANKFSQFFGGLPQYKVPGKTYPV 521 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQE---SHGDILIFMSGEREIRDTADALNKL 313 +V + T D ++A + GDILIFM+G+ +I + + + Sbjct: 522 QVMH------TSGTVPDYVEAAVSQAVRIHLTTAIQSGDILIFMTGQEDILCCIELIKER 575 Query: 314 ---------------NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLT 356 + E+ P+Y+ L QNR+F R+IV++TN+AETSLT Sbjct: 576 IVDLYGKKYGINTFDKVDDVELFPIYSALPAEIQNRIFLDLDIGKRKIVVSTNIAETSLT 635 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + GI+YVID G +++ Y+ + + L I PIS A+ANQR GR GR + GI RLYSE+ Sbjct: 636 ISGIRYVIDCGYSKLKVYNPKIGLDSLAIAPISIANANQRSGRAGRTAPGIAYRLYSEET 695 Query: 417 FLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 L+ + T PEI RTNL++++L + +LG+ ++ FPF++ P + + L LG + Sbjct: 696 ELTDMYQQTIPEIKRTNLSNIVLTLKSLGIKNVVDFPFLDPPSIETLMASMYELWFLGVL 755 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 D + L LG+++ P+ P L+++++++ GC +E + I + LS+ ERP Sbjct: 756 NDDGE-----LNALGKKMVNFPLQPTLSKVLIQSISFGCSKEVVTIVAMLSVPQVFERPK 810 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 ++Q+ +DE +RF ESD L +N+++ S+ + C+ +++ Y + + Sbjct: 811 ERQKEADEARKRFFISESDHLTLMNVYDQW------KSAKYSPKWCKKNFVLYKSLIRAR 864 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 +I TQ+ ++K+ + S ++ I + +G + + Sbjct: 865 EIRTQIVSLLKQQKHKLKSAGSDLSIIRKCICSGFAQQAAKASGLTKYVHLRTGMELRVH 924 Query: 656 PGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 P S L+ P P +V+ E++ T + + +DP W+ L Sbjct: 925 PTSSLYGLPNLPPYVIYHEMLLTEQEYICCVTSVDPLWLADYGSLLY 971 >UniRef50_C5DJP0 KLTH0F17974p n=2 Tax=Saccharomycetaceae RepID=C5DJP0_LACTC Length = 1108 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 248/716 (34%), Positives = 375/716 (52%), Gaps = 53/716 (7%) Query: 11 ALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMA--KEIDQAAGKVLLREAAR 68 +L + S M+ +R +R +H K + D + E+ KE + +E Sbjct: 322 SLNAKKGSRMVAERR--TREVHKAKIEETTDLRGTAIGEVMGVKEKPAGNSDLEPKEKNS 379 Query: 69 PE---------ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + +LP Q + ++L+ IRD+QVV+V GETGSGKTTQL + E G Sbjct: 380 SKNLETSYEHIQEVRKSLPAYQVRSELLQLIRDNQVVVVIGETGSGKTTQLAQFLNEDGF 439 Query: 120 GIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGIL 178 G +G TQPRR+AA +VA R+A E+ E G +GY +RF D S +T +K MTDGIL Sbjct: 440 CNSGRLVGCTQPRRVAAMSVATRVAMEMGVELGNEVGYSIRFEDKTSKDTKIKFMTDGIL 499 Query: 179 LAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFS 238 L E +L +Y II+DEAHERSLN D L G LK LL +R DLK+IITSAT++ RFS Sbjct: 500 LRETLVSEMLDKYSCIIMDEAHERSLNTDVLFGILKNLLSKRRDLKLIITSATMNANRFS 559 Query: 239 RHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQES--HGDILI 295 R F AP + GRT+PV+V Y D ++ AI A +GDILI Sbjct: 560 RFFGAAPQFTIPGRTFPVQVVYS------RHPVSDYVESAIVQACKIHLSTPVSNGDILI 613 Query: 296 FMSGEREIRDTADALNKL---------------NLRHTEILPLYARLSNSEQNRVFQS-H 339 FM+G+ +I T + + EILP+Y+ L Q ++F+ Sbjct: 614 FMTGQEDIEATCAGVYEKLLDVYAKRSGKQQLNQPEDIEILPIYSALPADVQGKIFEPTP 673 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 + R++V+ATN+AETSLTV G++YVID G +++ Y+ + + L I PIS ASANQR GR Sbjct: 674 NKRKVVVATNIAETSLTVEGVRYVIDCGYSKLKVYNPQIGLDSLQIAPISMASANQRSGR 733 Query: 400 CGRVSEGICIRLYSED-DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 GR G RLY+ED F T PEI RTNL++ +L + LG+ DI AFPFV+ P Sbjct: 734 AGRTGPGFAYRLYTEDSFFDDMYVQTIPEIQRTNLSNTLLLLKYLGVNDIMAFPFVDPPP 793 Query: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518 ++ I + L +GA+ + LT LG+Q++ P+ P L++M+L + ++GC E Sbjct: 794 EQIIMTSLFELWTIGALD-----NFGNLTELGKQMAAFPLQPSLSKMLLVSSQNGCSEEI 848 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 + I S LS+ RP ++++ SD+ RF ESD L +N+++ +++ Sbjct: 849 LTIVSMLSVPQVFYRPKEREKESDQCRTRFFVPESDHLTLLNVYSQW------KANSYSS 902 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD 638 CR ++L + ++ ++I QL ++ + +PV S ++ + + G Sbjct: 903 HWCRRNFLQFKSLQRAREIRRQLYTLMNKKKVPVVSSGTDWDAVRKCICAGYAHQAAKLS 962 Query: 639 ADKQEYTGARNARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 + + P S LF P +V+ EL+ T+ + +DP+W+ Sbjct: 963 GLSRYTQLRNGLELRVHPTSALFGAGDLPSYVVYHELLLTTNEYINTVTAVDPDWL 1018 >UniRef50_Q6A8Y5 ATP-dependent helicase HrpA n=3 Tax=Propionibacterium acnes RepID=Q6A8Y5_PROAC Length = 1361 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 293/807 (36%), Positives = 445/807 (55%), Gaps = 47/807 (5%) Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 R P + + S D+ D +A LW YL Q++ + S+AFRR+CR +Y+NYLR Sbjct: 564 RHTPHTRGKISPRPQAGGIDEGGDIMAIHRLWRYLRHQRRQMGSSAFRRMCRAEYINYLR 623 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM-----------KDA 639 VREW D++ QLRQ+ KEL + VN A + +ALL+GLLSHIG+ + Sbjct: 624 VREWDDLHGQLRQIAKELHLEVNRTSAPTDRVLVALLSGLLSHIGLVQVRQPAKRHGQRP 683 Query: 640 DKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 QEY GAR +F+I PGS L +K P+ V+ ELVETSRLW R A + PEWVE VA L Sbjct: 684 GPQEYLGARGTKFAINPGSLLARKSPELVVAVELVETSRLWARTVAAVQPEWVEEVAGPL 743 Query: 700 IKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDW 759 I+R+++ PHW + +V+ATE+ T++G+P+ A R+V Y +IDP R++FIR ALVE +W Sbjct: 744 IRRSWAVPHWAASTASVVATERGTLFGVPLWADRRVTYGRIDPVASRQIFIRSALVERNW 803 Query: 760 QTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK 819 ++ H F + N ++R E +LE +SR+R ++ DD+ +F FYD+RI ++S HFD+WW++ Sbjct: 804 RSDHGFLKHNDRVRDEAADLEERSRQRGLVADDDAIFAFYDRRIPDGIVSGSHFDAWWRR 863 Query: 820 VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIP 879 V + L+ L+ + + +P+ W GNL+L + Y FEPG+ DGVTV IP Sbjct: 864 V--QDRHQLDLSIDDLV--DSGSVDADAFPDHWKVGNLELPVRYVFEPGSGHDGVTVTIP 919 Query: 880 LPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE--- 936 L LLNQV + F WQ+PGLR EL LI++LPK +R VPAP+ A A L ++ + Sbjct: 920 LALLNQVPTAPFSWQVPGLRTELATELIRALPKRIRTQLVPAPDRARAALTWLEDHDADR 979 Query: 937 -LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNK-------------- 981 P + L R LR +TGV ++ +DW+ +P HL+I F + D + + Sbjct: 980 HAPFTNELGRALRTLTGVIINPDDWNIAAIPAHLRIGFDITDAEGRPVGKKSKKNGKDKL 1039 Query: 982 ------KLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGN 1035 + L L+ L KV ++L+ A + G W+F +P+ + R Sbjct: 1040 KGSQPAPIARSEDLDALQTDLAPKVSQSLTKAAGQ-PQIHGAKEWTFDPIPKRVDLSRKG 1098 Query: 1036 YKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKL 1095 +P LVDE DSV + D P Q+ + +G+ +LL+LN+P P K++ + N KL Sbjct: 1099 PDAVGYPCLVDEGDSVGTTVLDTPRAQRTSHASGVVKLLVLNLPDPTKWVVTHMDNATKL 1158 Query: 1096 GLYFNPYGKVLELIDDCISCGVDKLIDANGGP---VWTEEGFAALHEKVRAELNDTVVDI 1152 L +PY V L+ D V + G + ++ F L VR + D + + Sbjct: 1159 ALATSPYPSVPALLADARHKAVASVAQEKAGDLSGIRDKKTFDDLALVVRQDQADRMARV 1218 Query: 1153 AKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRY 1212 + +IL+ V + L D + +DI AQ+ LV+ F++ D R+ Sbjct: 1219 VRTAGRILSRVVAARQALATVSDPAIH---ADIVAQIDDLVFENFISATPDPWYDDMPRW 1275 Query: 1213 LQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELR 1272 +Q + R+E L +P RD QM ++E + + + P + +V+EI +M+EELR Sbjct: 1276 IQGVSVRIESLMTNPSRDPRQMAELEPLLADYDALCEEQPAGK-LPAEVEEIGFMLEELR 1334 Query: 1273 VSYFAQQLGTPYPISDKRILQAMEQIS 1299 V YFAQ+LGT +S KRI A+ ++S Sbjct: 1335 VQYFAQKLGTRVSVSPKRIRMAIAKLS 1361 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 314/507 (61%), Positives = 383/507 (75%), Gaps = 32/507 (6%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +T+ +LP++ +I + I+ HQVV+VAGETGSGKTTQLPKIC+ LGR I HTQP Sbjct: 16 VTFDTDLPIAAHADEIADLIKHHQVVVVAGETGSGKTTQLPKICLALGR---RQIAHTQP 72 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA R+AEE+ E G +GY+VRF+ S +T + +MTDG+LLAEI DR L Sbjct: 73 RRIAARSVAERVAEEMGVELGEQVGYQVRFTRRASSDTALTVMTDGVLLAEISHDRDLCA 132 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 +DTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID RFS HF++AP+IEVS Sbjct: 133 HDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTARFSAHFDDAPVIEVS 192 Query: 251 GRTYPVEVRYRPI----------------------------VEEADDTERDQLQAIFDAV 282 GRTYPVEVRYRP+ + DD DQ+ I AV Sbjct: 193 GRTYPVEVRYRPLDPSEQIRPDDEDDIDDEDELLHRPSAPSLTSPDDEVVDQVTGICRAV 252 Query: 283 DELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGR 342 EL +E GDIL+F++GE+EIR+TA+AL LNL +TE+LPL+ARLS +EQ+RVF H+GR Sbjct: 253 QELCREESGDILVFLAGEQEIRETAEALADLNLSNTEVLPLFARLSAAEQHRVFTPHTGR 312 Query: 343 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGR 402 RIVLATNVAETSLTVPGI+YVIDPGTARISRYS RTKVQRLPIEP+SQASANQR GRCGR Sbjct: 313 RIVLATNVAETSLTVPGIRYVIDPGTARISRYSVRTKVQRLPIEPVSQASANQRAGRCGR 372 Query: 403 VSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 V+ GICIRLYS+ F SRPEFT+PEILRTNLA+VILQM LG I FPFVEAPD+ I Sbjct: 373 VAPGICIRLYSQTSFESRPEFTEPEILRTNLAAVILQMAQARLGAITDFPFVEAPDRSRI 432 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 DG+RLL+ELGA+ A +LT +G QL+++P+DPRL RM+LE + G + E ++I Sbjct: 433 NDGIRLLDELGALKP-GHRDASRLTKIGHQLARVPLDPRLGRMLLEGARQGSLAEVLVIV 491 Query: 523 SALSIQDPRERPMDKQQASDEKHRRFH 549 +ALSI+D RERP DK++ +D HRRF Sbjct: 492 AALSIRDVRERPADKREEADAFHRRFA 518 >UniRef50_D1ZEJ8 Whole genome shotgun sequence assembly, scaffold_22 n=1 Tax=Sordaria macrospora RepID=D1ZEJ8_SORMA Length = 1177 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 238/690 (34%), Positives = 368/690 (53%), Gaps = 43/690 (6%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIR 91 K P Q + KE +AA + AA+ +LPV + L+AI+ Sbjct: 235 DAAAKFIQPTDGLTPEQRILKEKIEAAER-----AAKSIQEVRKSLPVYAYRDAFLDAIK 289 Query: 92 DHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVANRIAEELKTEP 150 ++QV+I+ GETGSGKTTQ+P+ E G G+ + TQPRR+AA +VA R+A+E+ + Sbjct: 290 EYQVLILVGETGSGKTTQIPQYLHEAGYTEGGMKVACTQPRRVAAMSVAARVADEMGVKV 349 Query: 151 GGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLL 210 G +GY +RF D SD T++K MTDG+LL E+ L Y I+IDEAHER+++ D LL Sbjct: 350 GREVGYSIRFEDCTSDKTILKYMTDGMLLREMVTSPTLEGYSAIMIDEAHERTVHTDILL 409 Query: 211 GYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDT 270 +K+L RPDLK+II+SAT++ E+FS +F++API V GR +PV+V Y Sbjct: 410 ALIKDLTRARPDLKLIISSATLNAEKFSTYFDDAPIFNVPGRVHPVDVYYTSA------P 463 Query: 271 ERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALN----KLNLRHTEILPL-- 323 E + L+A V ++ + G IL+F++G+ EI + + KL R EI+PL Sbjct: 464 ESNYLEASLVTVFQIHATQPEGGILVFLTGQEEIDKACERVEEIKRKLGSRVPEIIPLPI 523 Query: 324 YARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY--RTK 379 YA + + Q ++F+ R++V +TN+AETSLT+ GI YVID G + + +S T Sbjct: 524 YANMPSELQAKIFEPTPPGARKVVFSTNIAETSLTIDGIVYVIDCGYVKENTFSPVGTTG 583 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVIL 438 L + P S+A+ANQR GR GRV G C RLY++ +LS E PEI RT+L+SV+L Sbjct: 584 QSTLAVVPCSRAAANQRMGRAGRVRPGKCFRLYTKFAYLSEMDESPTPEIQRTSLSSVVL 643 Query: 439 QMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPV 498 Q+ ALG+ D+ F F++ P + + +L LGA+ SA +LT +GRQ+ + P Sbjct: 644 QLKALGIEDLLGFDFLDPPPTELLIKSLNMLYALGALN-----SAGQLTRVGRQMGEFPA 698 Query: 499 DPRLARMVLEAQKHGCVREAMIITSAL-SIQDPRERPMDKQQASDEKHRRFHDKE-SDFL 556 +P LA+ ++ A GCV E + I S L + P DK+ +D RF K+ D L Sbjct: 699 EPMLAKALIAATTEGCVDEMLTIVSMLGEVATLFFCPKDKKVHADSARARFTVKDGGDHL 758 Query: 557 AFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-KELGIPVNSE 615 +N++N + ++ + ++L + +D+ QL ++ + L ++ Sbjct: 759 TLLNVYNQW------VDADYSPIWAKENFLTQRSLTRARDVRDQLAKLCDRVLEGSTSTC 812 Query: 616 P--AEYREIHIALLTGLLSHIGMKDADK-QEYTGARNARFSIFPGSGLFKK--PPKWVMV 670 + + I AL + + T N + P S + PPK ++ Sbjct: 813 GGVSNMQPILRALTAAFFLNAARLNRGGDGYRTLKNNMTVYVHPSSVVKGMDPPPKVIIY 872 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLI 700 ELV T++ + R IDP+W+ H Sbjct: 873 HELVVTTKEFVRSVIPIDPKWLTEFGGHYY 902 >UniRef50_UPI000186CCEB ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CCEB Length = 695 Score = 765 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 223/663 (33%), Positives = 365/663 (55%), Gaps = 31/663 (4%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 Q+ ++ + LPV +Q ++ I H+++I+ GETG GKTTQ+P+ Sbjct: 43 QSPSAKSSPTNSKSILEQRQGLPVYNARQRLINLIEKHEILIIIGETGCGKTTQIPQFIF 102 Query: 116 ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 E +IG TQPRR+AA T++ R+AEE+ T G +GY +RF D S NT +K +TD Sbjct: 103 EERINGSKMIGVTQPRRVAATTLSARVAEEMNTVLGETVGYSIRFEDLTSHNTKIKFLTD 162 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD-----LKIIITSA 230 G+LL E D LMQY+ II+DEAHER+++ D L G +K+ R + LK+II SA Sbjct: 163 GMLLREAILDDKLMQYNFIILDEAHERTIHTDVLFGIIKKAHKTRKERGLPILKVIIMSA 222 Query: 231 TIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH 290 T+D + FS +F + P++ + GR Y VEV + A ++ D L + V ++ QE+ Sbjct: 223 TMDVDHFSSYFGDVPVVYLEGRQYSVEVLH------AVQSQDDYLFSSLVTVFQIHQEAP 276 Query: 291 G--DILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQ--SHS 340 DIL+F++G+ EI A + + ++LPLY+ L + + F+ H Sbjct: 277 PNEDILVFLTGQEEIESFAFKVKSIVKDLENMTPPLKVLPLYSSLPSLQLAEAFKPTPHG 336 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 R+IV++TN+AETS+T+PGIKYVID G + ++ T + L + ISQA A QR GR Sbjct: 337 LRKIVISTNIAETSVTIPGIKYVIDSGKVKAKMFNPITGLDMLQVRTISQAQAWQRSGRA 396 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GR S G C R++++D+F + + PEILR NLASV LQ+ LG+ +I F F++ P K Sbjct: 397 GRDSSGHCYRIFTKDEFDKFDKNSQPEILRCNLASVSLQLLTLGI-NILNFDFMDKPPKE 455 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 +++ + L+ LGAI E+ +LT LG+Q++Q P+DPR ++++L A +GC+ E + Sbjct: 456 SLKSALTELKLLGAIDCVEKP---QLTKLGKQMAQFPIDPRYSKILLSAIDYGCLDEIIT 512 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 I + LS + + K+ + E H++F D + +N++ + + ++ Sbjct: 513 IIALLSGESVLIHSLTKRDEAKEAHKKFLSSSGDHITLLNVFRNFKKM------SQQKQW 566 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAD 640 C ++L++ + ++ QL ++ K I + S + +I L+TGL ++ D Sbjct: 567 CHENFLHFRNLVYASNVRKQLVEICKRNDITITSCNSNIDQIRKCLVTGLFMNVAELQLD 626 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 K+ + SI P S L P V+ +E+V T++ + R IDP+W+ Sbjct: 627 KKYMMLSTRQMVSIHPTSVLGGTLPHCVLFSEVVHTTKCYIRQLTVIDPDWLTETMPEYF 686 Query: 701 KRT 703 ++ Sbjct: 687 RQH 689 >UniRef50_A5AMC2 Putative uncharacterized protein n=2 Tax=Eukaryota RepID=A5AMC2_VITVI Length = 855 Score = 763 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 215/677 (31%), Positives = 356/677 (52%), Gaps = 55/677 (8%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 ++ + + A F + K+ D+A + + + Y LP+ ++++L+ IR++Q Sbjct: 159 EEGEVDFKEDAKFAQHLKK-DEAVSEFAKSKTLAEQRQY---LPIYSVREELLQVIRENQ 214 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 VV+V GETGSGKTTQL + E G G++G TQPRR+AA +VA R++EE++TE G + Sbjct: 215 VVVVVGETGSGKTTQLTQYLHEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMETELGDKV 274 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D NT +K MTDG+L+ E +D L +Y +++DEAHERSLN D L G LK Sbjct: 275 GYAIRFEDVTGPNTKIKYMTDGVLMRETLKDSELDKYRVVVMDEAHERSLNTDVLFGILK 334 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 +++ +R D K+I+TSAT++ ++FS F + PI + GRT+PV + Y E D Sbjct: 335 KVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFPVNILYSKTPCE------DY 388 Query: 275 LQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR 334 ++ G + M+G L+ +T +L Q + Sbjct: 389 VE--------------GAVKQAMTG---------CLSSQYSLYTP------QLPADLQAK 419 Query: 335 VFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 +FQ R+ ++ATN+AETSLTV GI YVID G ++ Y+ R + L + P+S+A+ Sbjct: 420 IFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAA 479 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAF 451 A+QR GR GR G C RLY+E +L+ PEI RTNL +V+L + +L + ++ F Sbjct: 480 ADQRAGRAGRTGPGTCYRLYTESAYLNELLASPVPEIQRTNLGNVVLLLKSLKIENLLDF 539 Query: 452 PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK 511 F++ P + NI + + L LGA+ + LT LG ++ + P+DP LA+M+L ++ Sbjct: 540 DFMDPPPQDNILNSMYQLWVLGALN-----NVGGLTELGWKMVEFPLDPPLAKMLLIGEQ 594 Query: 512 HGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKA 571 C+ E + I S LS+ RP D+ + SD +F ESD L +N++ Q Sbjct: 595 LECINEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQYR 654 Query: 572 LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLL 631 C +L+ +R+ +++ +QL ++K L IP+ S ++ + A+ + Sbjct: 655 GD------WCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCGPDWDVVRKAICSAYF 708 Query: 632 SHIGMKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDP 689 + + + P S L+ P +V+ EL+ T++ + + A ++P Sbjct: 709 HNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELILTAKEYMQCATAVEP 768 Query: 690 EWVEPVAQHLIKRTYSE 706 +W+ + S+ Sbjct: 769 QWLAELGPMFFSVKDSD 785 >UniRef50_Q9H6R0 Putative ATP-dependent RNA helicase DHX33 n=37 Tax=Eumetazoa RepID=DHX33_HUMAN Length = 707 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 214/645 (33%), Positives = 354/645 (54%), Gaps = 29/645 (4%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 +LP+ Q + +L +R+ ++ GETGSGKTTQ+P+ E G +G+I TQPRR+ Sbjct: 71 RRSLPILQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRV 130 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA ++A R+++E +TE G +GY VRF D S++T +K +TDG+LL E D LL +Y Sbjct: 131 AAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTGIKFLTDGMLLREAISDSLLRKYSC 190 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPD-----LKIIITSATIDPERFSRHFNNAPIIE 248 +I+DEAHER+++ D L G +K RR + LK+I+ SAT+D + FS++FN AP++ Sbjct: 191 VILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLY 250 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG--DILIFMSGEREIRDT 306 + GR +P++V Y + D L A +V ++ QE+ DIL+F++G+ EI Sbjct: 251 LEGRQHPIQVFY------TKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAM 304 Query: 307 ADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVP 358 + + +LPLYA L ++Q RVFQ R+++++TN+AETS+T+ Sbjct: 305 SKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITIT 364 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GIKYV+D G + +Y+ + ++ L ++ +S+ A QR GR GR GIC RLY+ED+F Sbjct: 365 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 424 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 + T PEI R NLASV+LQ+ A+ + ++ F F+ P +IQ + L+ LGA+ + Sbjct: 425 KFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGAL--E 482 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 + LTP+GR+++ P++P+ A+ +L + K C E + I S LS+ P ++ Sbjct: 483 HKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRR 542 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 + ++F E D + +N++ K L N + C+ +++N + ++ Sbjct: 543 EEVQGVRKKFISSEGDHMTLLNIYRTF----KNLGGN--KDWCKENFVNSKNMTLVAEVR 596 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QLR + ++ +P+ S + + L L D T + +I P S Sbjct: 597 AQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSS 656 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 LF P V+ EL+ T++ + R ID +W+ A +R Sbjct: 657 VLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701 >UniRef50_A5DRX8 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DRX8_LODEL Length = 1141 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 219/673 (32%), Positives = 351/673 (52%), Gaps = 51/673 (7%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK-------- 122 + +LP K D++ IRD+QV I+ GETGSGKTTQL + E G Sbjct: 413 MEQRRSLPAFAVKDDVVATIRDNQVTIIIGETGSGKTTQLTQYLYEAGLAHNADEAGQGS 472 Query: 123 ---------GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLM 173 +I TQPRR+AA +VA R++EE+ + G +GY VRF D S++T++K M Sbjct: 473 GLGVAGQEKKMIACTQPRRVAAMSVAKRVSEEMGVKLGAEVGYSVRFDDKTSNSTLIKYM 532 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATID 233 T+GILL EI D LL+ Y II+DEAHERSLN D LLG K LL RR DLK+I+TSAT++ Sbjct: 533 TEGILLREILADPLLLDYSCIIMDEAHERSLNTDILLGLFKGLLARRRDLKLIVTSATMN 592 Query: 234 PERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVD-----ELSQE 288 +RF+R F AP + GRT+PV+V + + D ++ I +L Sbjct: 593 ADRFTRFFGAAPQFTIPGRTFPVDVYFN--RNVSMDYVESAVKQILSIHLGSMAGKLEFV 650 Query: 289 SHGDILIFMSGEREIRDTADALNK-----LNLRHTEILPLYARLSNSEQNRVFQSHS--G 341 + GDIL+FM+G+ +I T D L + N ++LP+Y+ + Q ++F+ + Sbjct: 651 NDGDILVFMTGQEDIEITCDILCEKLAMLENPPPLDVLPIYSTMPPEMQKKIFRKKNLAR 710 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 R++V+ATN+AETSLTV GIKYVID G ++ Y+ + + L + P+S A+A+QR GR G Sbjct: 711 RKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPVSLANADQRSGRAG 770 Query: 402 RVSEGICIRLYSEDDFLS--RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459 R S G+ RLY+E+ S PEI RTNL++ +L + +L + DI FPF++ P K Sbjct: 771 RTSAGVAYRLYTENATSSKCMYAQPIPEIQRTNLSNTMLLLKSLNVKDINNFPFLDPPPK 830 Query: 460 RNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA--QKHGCVRE 517 + + L + A+ + +LT LG ++ Q P++P L++++L + + C + Sbjct: 831 DLLNCSLYDLWAIDALD-----NYGELTKLGLEMVQFPIEPTLSKLILLSTQPEFHCSED 885 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAF 577 + I + LS+ + R ++ + SD +F +SD L +N++ K +N Sbjct: 886 IVTIVAMLSVSNIFFRSKERAKESDLAREKFVVADSDHLTLLNVYTQWEVNVKKFGNNWT 945 Query: 578 R--RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 635 + + C ++L + ++I QL Q++ + +P+ + ++ L Sbjct: 946 KLTQWCEKNFLQLKSLHRAKEIRRQLVQIMHKNKLPLLKSYHD-DDVRKCLCATFYHQAA 1004 Query: 636 MKDA----DKQEYTGARNA--RFSIFPGSGLFKKPP--KWVMVAELVETSRLWGRIAARI 687 E+ R++ + + P S L +V+ ELV TS+ + + Sbjct: 1005 KLIKTNVNGSPEFINLRHSYMKMYLHPTSSLLDSNMGLNYVVYHELVLTSKEYMNYVTCV 1064 Query: 688 DPEWVEPVAQHLI 700 +P W+ Sbjct: 1065 EPTWLLEYGYKFY 1077 >UniRef50_Q6CF95 YALI0B09053p n=1 Tax=Yarrowia lipolytica RepID=Q6CF95_YARLI Length = 1077 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 227/741 (30%), Positives = 367/741 (49%), Gaps = 49/741 (6%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVK----------KVKNPDAQQAIFQEMAKE- 53 + L +R S +++DR + R VK + + + E+ KE Sbjct: 316 VQSDLAILAKR-GSQLVKDRRQLRERAKQVKDASSTQGTVLGLVDEKKAEETKAEVKKEK 374 Query: 54 -IDQAAGKVLLREAARPEITYPDN---LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQ 109 I+ E +T + LP + +L+ I+ +QV IV GETGSGKTTQ Sbjct: 375 LIEVKTEVKEDPEVESKPLTPKEARTLLPAFAVRDPLLQVIQSNQVTIVIGETGSGKTTQ 434 Query: 110 LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM 169 L + E G +G+IG TQPRR+AA +VA R+++E++ G +GY +RF DH S T Sbjct: 435 LTQYLYEAGYAERGMIGCTQPRRVAAMSVAQRVSQEMEVRVGQEVGYAIRFEDHTSPATK 494 Query: 170 VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITS 229 +K +TDGILL E D L Y +I+DEAHER+LN D LLG + +L +R DLK+I+TS Sbjct: 495 IKYLTDGILLRETLTDPTLDNYSCVIMDEAHERALNTDILLGLFRTILAKRRDLKLIVTS 554 Query: 230 ATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS--- 286 AT++ +RFS F AP + GRTYPV V + D + A V + Sbjct: 555 ATMNSKRFSDFFGGAPTFTIPGRTYPVSVHHERA------PVDDYVAAAVKKVLSIHVSS 608 Query: 287 QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVF--QS 338 + S GDIL+FM+G+ +I T + L + N ILP+++++ QN++F Sbjct: 609 EVSTGDILVFMTGQEDITVTCEVLEERLQKDLDNPAPLMILPIFSQMPADLQNKIFNKAP 668 Query: 339 HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398 R+ ++ATN+AETSLTV GI +V+D G +++ YS +T + L + PIS A A QR G Sbjct: 669 PGVRKCIVATNIAETSLTVDGITFVVDAGYSKLKVYSPKTGMDSLQVAPISVAQAVQRSG 728 Query: 399 RCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 R GR ++G RLY+E PEI RTNLA+ +L + ++G+ D+ F F++ P Sbjct: 729 RAGRTAKGTAYRLYTEHAEREEMYPTAIPEIQRTNLANTLLLLKSVGVTDLMKFAFMDPP 788 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 K I + L LGA+ + +T LG ++SQ P+DP L ++++++ +GC +E Sbjct: 789 PKDTIMASLYELWSLGAVD-----NLGNITQLGMKMSQFPMDPCLGKILIKSVDYGCSKE 843 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAF 577 + + + L + RP ++QQ +D +F ESD L ++++ L + Sbjct: 844 MLSVVAMLCVPTVFYRPPERQQEADSAREKFFVPESDHLTLLHVYTQW------LHNKKS 897 Query: 578 RRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMK 637 C +L+ + + ++ QL Q++ + ++S ++ + + G Sbjct: 898 PVWCAKHFLHAKALEKAHEVREQLEQIMTTNKMHIDSCGTDWDLLRKCICAGFFHQAARV 957 Query: 638 DADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 + P S L+ P +V+ EL+ TS+ + +DP W+ Sbjct: 958 HGLGSYRNLRTLVSTQLHPTSALYGLGYLPAFVVYHELILTSKEYMSCVTSVDPAWLAEF 1017 Query: 696 AQHLI--KRTYSEPHWERAQG 714 K + + R + Sbjct: 1018 GSCFYVLKDRTGKVDFSRKRA 1038 >UniRef50_P15938 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=7 Tax=Saccharomycetaceae RepID=PRP16_YEAST Length = 1071 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 233/654 (35%), Positives = 350/654 (53%), Gaps = 44/654 (6%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK--GLIGHTQPR 131 + LPV + + +L IR++QVV++ GETGSGKTTQL + E G I TQPR Sbjct: 347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPR 406 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHV-SDNTMVKLMTDGILLAEIQQDRLLMQ 190 R+AA +VA R+A E++ G +GY +RF D S+ T +K +TDGILL E D L + Sbjct: 407 RVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDK 466 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y +IIDEAHERSLN D LLG+ K LL RR DLK+IITSAT++ ++FS F NAP + Sbjct: 467 YSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIP 526 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS---QESHGDILIFMSGEREIRDTA 307 GRT+PV+ Y + +D ++A ++ S GDILIFM+G+ +I T Sbjct: 527 GRTFPVQTIY------TSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTF 580 Query: 308 DALNK---------------LNLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNV 350 D L + + EILP+Y+ L Q ++FQ + R+I++ATN+ Sbjct: 581 DTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNI 640 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLT+ GI+YVID G +++ Y+ + + L I PIS+A+A+QR GR GR + G R Sbjct: 641 AETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYR 700 Query: 411 LYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGD-IAAFPFVEAPDKRNIQDGVRL 468 LY+ED F T PEI RTNL++ +L + +L + D ++ FPF++ P + + Sbjct: 701 LYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYE 760 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L +GAI T Q LTPLG Q+++ P+ P L++++L A ++GC E + I S LS+ Sbjct: 761 LWFIGAIDTSGQ-----LTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVP 815 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 RP ++Q+ +D +F +SD L +N++ +N C ++ Y Sbjct: 816 QVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRA------NNFSSHWCNKHFVQY 869 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR 648 + +DI QL ++K IPV S ++ I + +G + Sbjct: 870 KSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKT 929 Query: 649 NARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 + P S L P +V+ EL+ TS+ + +DP W+ L Sbjct: 930 GVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLY 983 >UniRef50_C5LYU2 ATP-dependent RNA helicase DHX8, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LYU2_9ALVE Length = 1016 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 223/738 (30%), Positives = 373/738 (50%), Gaps = 83/738 (11%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++++ + A+Q+++ + +D + + NP + + + I + Sbjct: 325 LAQERRESKQAMQEQVIKAIPKD-------MSRPWEDPNPHQGERTLAQNLRSITMNSAS 377 Query: 61 VLL-------------REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 + +A P + LP+ + + +L+A+ ++QV+IV GETGSGKT Sbjct: 378 QNQIRKHGAPTGVAYGQRSALPMREQREGLPIFKLRSQLLQAMAENQVLIVIGETGSGKT 437 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+ + E G G+IG TQPRR+AA TVA R+AEE G +GY +RF DH S Sbjct: 438 TQMTQYMAEAGYADHGIIGCTQPRRVAAITVAKRVAEEYGCRLGQEVGYTIRFEDHTSPE 497 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 T +K MTDG+LL E D LL +Y I++DEAHER+++ D L G KE + R DLK+I+ Sbjct: 498 TRIKYMTDGMLLREALADPLLKKYSVIMLDEAHERTIHTDVLFGLCKEAIRERNDLKLIV 557 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS- 286 TSAT+D E+FSR+F ++ I + GRT+PVE+ Y ++ E D +QA V ++ Sbjct: 558 TSATLDAEKFSRYFFDSHIFTIPGRTFPVEILYS------NEPEEDYVQAALMTVMQIHL 611 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 E GDIL+F++G+ EI L++ R ++ P+ Sbjct: 612 TEQPGDILVFLTGQEEIDTACQLLDE---RMAQLAPM----------------------- 645 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 +P Y P + S + P + A+A QR GR GR G Sbjct: 646 -----NPPPLIPMGVYAAQPSEVQSSIFEPA------PXSRLPTANARQRAGRAGRTGPG 694 Query: 407 ICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 C RLY+E F PEI R+NL++V+L + A+G+ D+ F F++AP + + + Sbjct: 695 KCYRLYTEKAFRTEMLPSAVPEIQRSNLSNVVLTLKAMGINDLLGFDFMDAPPVQTLINS 754 Query: 466 VRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 + L +LGA+ + LT LGR++++ P+ P ++M+L + GC EA+ + + L Sbjct: 755 LEALWQLGALDDEGL-----LTKLGRKMAEFPMPPEQSKMLLASVDLGCADEAITVVAML 809 Query: 526 SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRTD 584 S+Q+ RP DKQ +D+K +F+ E D + + ++ KA S N F C + Sbjct: 810 SVQNVFYRPKDKQAVADQKKSKFNSPEGDHVTLLEVY-------KAWSRNRFSAPWCYEN 862 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 ++ +R+ QD+ QL ++ + +NS +Y + A+ G +++ +D ++ Sbjct: 863 FIQVRSLRKAQDVRKQLIGIMDRYRLEINSCGQDYNRLRQAIAAGYFNNLCRRDPNEGYR 922 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 + I P S L++K P+WV+ ELV T+R + R ++PEW+ +A ++ K+ Sbjct: 923 VMRDLQQVYIHPSSALYQKNPEWVIYYELVMTTREYIREVCTVEPEWMPKIAPNMFKQA- 981 Query: 705 SEPHWERAQGAVMATEKV 722 R + A EK+ Sbjct: 982 ----DNRGISRMKANEKI 995 >UniRef50_D1IUD7 Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IUD7_VITVI Length = 687 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 218/696 (31%), Positives = 350/696 (50%), Gaps = 69/696 (9%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 K+ + AI + + + LPV +K++ L+ ++ +Q Sbjct: 23 KISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEILEKRRTLPVWHQKEEFLQVLKANQS 82 Query: 96 VIVAGETGSGKTTQLPKICMEL------GRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 +I+ GETGSGKTTQ+P+ +E + K +I TQPRR+AA +V+ R+AEE+ Sbjct: 83 LILVGETGSGKTTQIPQFVLEAVDIETPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVT 142 Query: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY +RF D S T++K +TDG+LL E D LL +Y II+DEAHER+L D L Sbjct: 143 IGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVL 202 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 G LKE+L RPDLK+++ SAT++ E+F +FN AP+++V GR +PVE+ Y + Sbjct: 203 FGLLKEVLKNRPDLKVVVMSATLEAEKFQGYFNGAPLMKVPGRLHPVEIFY------TQE 256 Query: 270 TERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL------NLRHTEILP 322 ERD L+A V ++ E GDIL+F++GE EI D ++K + + +P Sbjct: 257 PERDYLEAAIRTVVQIHMCEGAGDILVFLTGEEEIEDACKKISKEIANLGDQVGPVKAVP 316 Query: 323 LYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 LY+ L + Q ++F+ A LT +V+ Sbjct: 317 LYSTLPPAMQQKIFEP------------APPPLT--------------------EVRVES 344 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMT 441 L + PIS+ASA+QR GR GR G C RLY+E F + T PEILR+NLA+ +L + Sbjct: 345 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 404 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 LG+ D+ F F++ P + + +L LGA+ D LT LG +S+ P+DP+ Sbjct: 405 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN-----LTKLGEIMSEFPLDPQ 459 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL 561 +++M++ + + C E + I++ LS+ + RP + Q+A+DE RF + D L +N+ Sbjct: 460 MSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNV 519 Query: 562 WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE--- 618 ++ + + S C +++N ++ ++ QL +++ + + S Sbjct: 520 YHAYKQNNEDPS------WCYENFVNQRALKAADNVRQQLVRIMARFNLKLCSTDFNSRD 573 Query: 619 -YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 Y I A+L G + + T N + P + L K P+WV+ E V TS Sbjct: 574 YYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTS 632 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 R + R + EW+ VA H P+ E + Sbjct: 633 RNFIRTVTDVRGEWLVDVAPHYYDLANF-PNCEAKR 667 >UniRef50_Q9VR29 CG3225 n=19 Tax=Neoptera RepID=Q9VR29_DROME Length = 678 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 230/685 (33%), Positives = 357/685 (52%), Gaps = 34/685 (4%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 K P+ AI E Q++ V + + LP+ Q + IL + HQV Sbjct: 7 KFLKPETDDAITDSAGGE-QQSSAFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQV 65 Query: 96 VIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 VI+ GETGSGK+TQ+P+ E G KGLIG T+PRR++ T+ANR+A+E G +G Sbjct: 66 VILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVG 125 Query: 156 YKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKE 215 Y VRF + +S T +K MT+GILL E+ D LL QY II+DEAHER++ D +LG LK+ Sbjct: 126 YVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKK 185 Query: 216 LLPRRPDLKIIITSATIDPERFSRHFNNAPI------IEVSGRTYPVEVRYRPIVEEADD 269 +L +R LK+II+SATID FS F+ + + GR +PV Y ++ Sbjct: 186 ILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYL------NE 239 Query: 270 TERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL----NLRHTEILPLY 324 D ++ + V +L Q E GDIL F++G+ E+ + D L + + ++LP+Y Sbjct: 240 PCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMY 299 Query: 325 ARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 +S+++Q VF R++VLATN+AETS+T+PGI YVID G ++ Y+ +T Sbjct: 300 GSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDS 359 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTA 442 L I P+S+ASA QR GR GR+ G RLY++ D+ + PE+ R+ L+ ILQ+ A Sbjct: 360 LVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKA 419 Query: 443 LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502 LG+G+I F F P +N+ + L L AI + P+G L++LP L Sbjct: 420 LGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTK----PVGYLLAELPFSAML 475 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQDPRERPMD--KQQASDEKHRRFHDKESDFLAFVN 560 ++M+ + + GC E + I + L +Q RP QQ+ HR+F E DF+ +N Sbjct: 476 SKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLN 535 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-KELGIPVNSEPAEY 619 + E + C +L Y ++ + QL V K+ GIP+ S + Sbjct: 536 AYTGFVE------EGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDV 589 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP-PKWVMVAELVETSR 678 ++ + G + + + +I P S L+ P ++V+ EL++T++ Sbjct: 590 EKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQYVVYGELLQTTK 649 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRT 703 L+ I EW+ +A H ++T Sbjct: 650 LFMNYVTVIKREWLTELAPHYYQQT 674 >UniRef50_Q5ANN5 Likely spliceosomal DEAD box ATPase n=3 Tax=Eukaryota RepID=Q5ANN5_CANAL Length = 865 Score = 753 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 228/658 (34%), Positives = 360/658 (54%), Gaps = 51/658 (7%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQP 130 +LPV +++ L+ I ++Q +IV GETGSGKTTQLP+ E G I TQP Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQP 283 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLM 189 RR+AA +VANR+A E++ + G +GY +RF D+ D T++K +TDG+LL E QD L Sbjct: 284 RRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLG 343 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSATIDPERFSRHFNNAPII 247 +Y I+IDEAHER+L+ + LL LK+++ R+ DLKIII SATI+ E+FS+ FNNAPI+ Sbjct: 344 KYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPIL 403 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS--QESHGDILIFMSGEREIRD 305 + GR +PV++ Y E + +QA + ++ Q GDIL+F++G+ EI Sbjct: 404 NIPGRRFPVKIHY------TKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIET 457 Query: 306 TADALNKLNLR------HTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTV 357 + L L+ + +YA L Q ++FQ R+IVLATN+AETS+T+ Sbjct: 458 MEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITI 517 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-DD 416 GI YVIDPG + + Y+ T ++ L + P S+ASA+QR GR GRV G C RL+++ Sbjct: 518 DGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSF 577 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 + PEI R NL SVIL + +LG+ D+ F F++ P K I + LL LGA+ Sbjct: 578 YNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALN 637 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPM 535 + KLT G+++S+ P+DP + +L + K ++ + I + L+ + RP Sbjct: 638 -----TQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPK 692 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 DK++ +D++ + F+D + D + +W + S + C+ ++ Y ++ + Sbjct: 693 DKKELADKRKQEFNDLQGDQFMLLKIWQQW------VDSGYSVQWCQDYFIQYKTMKRIK 746 Query: 596 DIYTQLRQVVKELGIPVNSEP----------AEYREIHIALLTGLLSHIGMKDADKQEYT 645 +IY QL ++ K++GI VNS + L++G ++I Y Sbjct: 747 NIYEQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQ 806 Query: 646 ------GARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 G N I P S ++ K PK+++ ELV TS+ + R +D + ++ Sbjct: 807 KLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIKEY 864 >UniRef50_B9WL64 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=7 Tax=Saccharomycetales RepID=B9WL64_CANDC Length = 1050 Score = 753 bits (1945), Expect = 0.0, Method: Composition-based stats. Identities = 218/664 (32%), Positives = 342/664 (51%), Gaps = 52/664 (7%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK-------GLIGHTQ 129 LP + D+L IRD+QV IV GETGSGKTTQL + E G G +I TQ Sbjct: 335 LPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGSNIDKNGEKKIIACTQ 394 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS-DNTMVKLMTDGILLAEIQQDRLL 188 PRR+AA +VA R++EE+ + G +GY +RF D + T++K MT+GILL EI D LL Sbjct: 395 PRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTNNKKTIIKYMTEGILLREILVDPLL 454 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 + Y II+DEAHERSLN D LLG K LL +R DLK+IITSAT++ RF++ F AP Sbjct: 455 INYSCIIMDEAHERSLNTDILLGLFKNLLSKRKDLKLIITSATMNANRFTKFFGAAPQFH 514 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-----------QESHGDILIFM 297 + GRT+PVE+ + D D ++ + + + GDIL+FM Sbjct: 515 IPGRTFPVEIFFN------RDVNMDYVEMAVKQILTIHLGRWNINATNGNGNDGDILVFM 568 Query: 298 SGEREIRDTADALNK-----LNLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNV 350 +G+ +I T D + + + +I P+Y+ + Q ++F + R++V+ATN+ Sbjct: 569 TGQEDIEITCDLIKEKLDLLEDPPPLDIYPIYSTMPQDLQKKIFNKMNLQRRKVVVATNI 628 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTV GIKYVID G ++ Y+ + + L + PIS A+A+QR GR GR GI R Sbjct: 629 AETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQMVPISLANADQRSGRAGRTGAGIAYR 688 Query: 411 LYSED--DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 LY+E D + PEI R+NL++++L + +L + DI +FPF++ P K + + Sbjct: 689 LYTEKATDPNNMYIQPIPEIQRSNLSNIMLLLKSLKINDINSFPFLDPPPKDLLNCSLHD 748 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA--QKHGCVREAMIITSALS 526 L +GA+ + +LT LG+ + Q P++P LA+++L + + C E + I + LS Sbjct: 749 LWAIGALD-----NLGQLTKLGQSMIQFPIEPTLAKLILLSTQSEFHCSEEIITIVAMLS 803 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS--NAFRRLCRTD 584 + + RP ++ +D +F ESD L +N++N N C + Sbjct: 804 VPNIYNRPKERSNEADMAREKFIISESDHLTLLNIFNQWEINLNKFKGDYNKINNWCNKN 863 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA----D 640 +L + +DI QL+ ++++ + + + I L Sbjct: 864 FLQLKSLYRVKDIKYQLKLIMQKNKLTILKSKNDND-IRKCLCASFYQQSAKLIKMNLNG 922 Query: 641 KQEYTGARNA--RFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 + E+ R++ + + P S L +V+ EL+ T + + +DP W+ Sbjct: 923 QPEFINLRHSYMKMFLHPTSCLLDSNLSTNYVIYHELILTKKEYMNYVTTVDPIWLLEYG 982 Query: 697 QHLI 700 Sbjct: 983 YKFF 986 >UniRef50_B9WE17 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=2 Tax=Candida RepID=B9WE17_CANDC Length = 866 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 227/658 (34%), Positives = 363/658 (55%), Gaps = 51/658 (7%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG-HTQP 130 +LPV +++ L+ I ++Q +IV GETGSGKTTQLP+ E G I TQP Sbjct: 225 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLYEAGYSQNNRIIACTQP 284 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLM 189 RR+AA +VA R+A+E++ + G +GY +RF D+ D TM+K +TDG+LL E QD L Sbjct: 285 RRVAATSVAKRVADEMQVKLGEQVGYNIRFDDNCKDGITMIKYVTDGMLLREFLQDPTLE 344 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELL---PRRPDLKIIITSATIDPERFSRHFNNAPI 246 +Y I+IDEAHER+L+ + LL LK+++ R+ DLKIII SATI+ E+FS+ FNNAPI Sbjct: 345 KYSVIMIDEAHERTLSTEILLSLLKDIIMTTTRKNDLKIIIASATINAEKFSKFFNNAPI 404 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS--QESHGDILIFMSGEREIR 304 + + GR +PV++ Y E + +QA + ++ Q GDIL+F++G+ EI Sbjct: 405 LNIPGRRFPVKIHY------TKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIE 458 Query: 305 DTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLT 356 + L+ + + +YA L Q ++FQ + R+IVLATN+AETS+T Sbjct: 459 TMEEILHDSIVKLGDQINPMMVCSIYANLPQELQQKIFQQTPTNTRKIVLATNIAETSIT 518 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-D 415 + GI YVIDPG + + Y+ T ++ L + P S+ASA+QR GR GRV G C RL+++ Sbjct: 519 IDGISYVIDPGYVKQNVYNPITGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWS 578 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 + PEI R NL SVIL + +LG+ D+ F F++ P K+ I + LL LGA+ Sbjct: 579 FYNELDLNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKQAIIKALNLLYALGAL 638 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERP 534 S KLT +G+++S+ P+DP + +L + K ++ + I + L+ + RP Sbjct: 639 N-----SQGKLTKIGKKMSEFPLDPIFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRP 693 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 DK++ +D++ + F+D + D +N+W + S + C+ ++ Y ++ Sbjct: 694 KDKKELADKRKQEFNDSQGDQFMLLNIWQQW------VDSGYSVQWCQDYFIQYKTMKRI 747 Query: 595 QDIYTQLRQVVKELGIPVN--------SEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 ++IY QL ++ +++GI VN + + L++G ++I Y Sbjct: 748 KNIYEQLIRLSRKIGIEVNNHQHPKESNNNDNCTLLTECLISGFFNNIVKLSPMGDCYQK 807 Query: 647 A-------RNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 N I P S L+ K PK+++ ELV TS+ + R +D + ++ Sbjct: 808 LTNGKNGNNNTPCYIHPSSCLYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIKQY 865 >UniRef50_B9H2M0 Predicted protein n=9 Tax=Embryophyta RepID=B9H2M0_POPTR Length = 702 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 225/664 (33%), Positives = 351/664 (52%), Gaps = 48/664 (7%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQP 130 + LPV + + IL + H I+ GETGSGKTTQ+P+ E G G I TQP Sbjct: 47 SQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 106 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLM 189 RRLA +TVA+R+AEE+ + G +GY +RF D + TM+K +TDG+LL EI D LL Sbjct: 107 RRLAVQTVASRVAEEMDVKLGEEVGYTIRFEDVTNPAATMIKFLTDGVLLREIMNDPLLT 166 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP---- 245 +Y I++DEAHERS++ D LLG LK++ RRP+L++II+SATI+ + S F + Sbjct: 167 KYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFQTSKKHRG 226 Query: 246 -------------IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHG 291 I+ V GR + V + Y + D +QA V + QE G Sbjct: 227 PEDHEFVPRKVPAILSVEGRGFNVHIHY------VVEPVSDYVQATVSTVLSIHEQEPAG 280 Query: 292 DILIFMSGEREIRDTADALNKLN------LRHTEILPLYARLSNSEQNRVFQS--HSGRR 343 DIL+F++G+ +I L + +LPLY+ L ++Q+ VF R+ Sbjct: 281 DILVFLTGQDDIDTAIRLLTEEAHASRKISSGLIVLPLYSSLPRADQDLVFSPTPRGKRK 340 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 +V++TN+AETSLT+ G+ YV+D G ++ Y+ + ++ L + PIS+ASA QR GR GRV Sbjct: 341 VVISTNIAETSLTLEGVVYVVDSGFSKQQFYNPISDIENLVVAPISKASARQRAGRAGRV 400 Query: 404 SEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 G C RLY+E+ F++ PE+ R+ L S ++Q+ ALG+ +I F + +P + Sbjct: 401 RPGKCYRLYTEEYFVNEMSSVGIPEMQRSKLVSCVIQLKALGIDNILGFDWPASPPPEAM 460 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 + +L LG + D + + +P+G Q +++P+DP +++M+L + + GC E + I Sbjct: 461 IRALEVLYSLGVLDDDAKLT----SPVGFQAAEIPLDPMISKMILSSNQLGCSDEIITIA 516 Query: 523 SALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCR 582 + LSIQ Q+ DE RF E D + F+N++ L S + C Sbjct: 517 AILSIQSIWVSGRGVQKELDEAKLRFAAAEGDHVTFLNVYKGF------LQSGKSSQWCH 570 Query: 583 TDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA--- 639 +Y+NY +++ +I QLR+ LGI + S + + A+ G ++ +A Sbjct: 571 KNYMNYQAMKKVIEIREQLRRTALRLGIVLKSCEGDMLAVRKAVTAGFFANASRLEAFSH 630 Query: 640 DKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 + T + I P S LF+ PKWV+ LV T R + R +DP W+ A H Sbjct: 631 NGMYKTVRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDRQYMRNVMTVDPSWLTEAAPHF 690 Query: 700 IKRT 703 + Sbjct: 691 FQHQ 694 >UniRef50_Q9BKQ8 Probable ATP-dependent RNA helicase DHX35 homolog n=5 Tax=Bilateria RepID=DHX35_CAEEL Length = 732 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 224/649 (34%), Positives = 345/649 (53%), Gaps = 43/649 (6%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAA 135 LP+ + + IL ++ +I+ GETG GK+TQ+P+ +E G G I TQPRR+A Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAV 136 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 T+A R+AEE G +GY VRF D +T VK MTDG+LL EI D LL +Y I+ Sbjct: 137 VTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIM 196 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----------NNAP 245 IDEAHERS N D LLG L++++ R DL+II++SAT+D E F F + A Sbjct: 197 IDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAG 256 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIR 304 II V GRT+PV V + + D Q+ D V + + E+ GDIL+F++G+ E+ Sbjct: 257 IISVEGRTHPVAVHH------TKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVE 310 Query: 305 DTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTV 357 D + L +L N ++P Y L EQ + F H R++V+ATN+AE S+T+ Sbjct: 311 DVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITI 370 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI YVID G ++ V+ L +S+ASA QR GR GR+ G C RLY E +F Sbjct: 371 PGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF 430 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 E T PEI R +AS ILQ+ ALG+ ++ F ++ P + +G+ LL LGAI Sbjct: 431 ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDE 490 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 Q + +PLG Q+++ P+ P ++ +L++ + GC E + I + + IQD P + Sbjct: 491 TSQLT----SPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQ 546 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 + +D ++F +E D + +N++ E ++ ++ C ++NY + ++ Sbjct: 547 RHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRS------KKWCSDHFVNYRGLMRADNV 600 Query: 598 YTQLRQVVKELGIPVNSEP---AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 +QL +++K I S I L+TG S + T + F++ Sbjct: 601 RSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNM 660 Query: 655 FPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + GS + K PKWV+ E+++ S R I+PEW+ +A H + Sbjct: 661 YKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYE 706 >UniRef50_D0MZQ2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ2_PHYIN Length = 910 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 221/704 (31%), Positives = 363/704 (51%), Gaps = 49/704 (6%) Query: 24 RLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKK 83 + ++R ++ + Q Q + + A ++ LP+ + Sbjct: 227 QHHGAQRKRPMQTSRPGFKQHKKHQHRSINPNPAVSELQRTRQR---------LPIYAHR 277 Query: 84 QDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIA 143 I+EA+ D+QVVI+ GETGSGKTTQ+P+ E R + TQPRR+AA TVA R+ Sbjct: 278 SKIIEAVNDNQVVILVGETGSGKTTQIPQYIWESDRA-HARVAITQPRRVAAITVAQRVC 336 Query: 144 EELK-TEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202 EE G +GY VRF D S NT +K MTDG+L+ E L +Y +++DEAHER Sbjct: 337 EEANRGPLGDSVGYCVRFDDTTSKNTRLKFMTDGMLVREALLSPTLERYSVVVLDEAHER 396 Query: 203 SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--APIIEVSGRTYPVEVRY 260 +L D L G +K + +R DLK+++ SAT+D F R F + +I++ GR + V+V Y Sbjct: 397 TLQTDILFGIVKRAMRKRKDLKVVVMSATLDVALFKRFFQDFKPAVIQIPGRMFQVDVFY 456 Query: 261 RPIVEEADDTERDQLQAIFDAVDELSQESH---GDILIFMSGEREIRDTADALNK----- 312 + D L + AV ++ E G IL+F++G+ +I L + Sbjct: 457 TAKTQP------DYLDSALVAVLQIHLEEKTSNGSILVFLTGQEDIETLETLLEEYARSL 510 Query: 313 -LNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTA 369 + + P++A + +Q +VF+ R+++LATN+AETS+T+ G++YV+D G Sbjct: 511 PADALKLMVCPIFAAMPREQQMKVFEPAPAGVRKVILATNIAETSITINGVRYVVDTGLV 570 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 + + + ++ L E +S+A A QR GR GR + GIC RL+ E+ F PE P+I Sbjct: 571 KQRSFVASSGMEMLQTESVSKAQAWQRTGRAGREAPGICYRLFPEETFEQLPERAIPDIQ 630 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 R +L V+LQ+ +G+ D AF F+E P K ++ + L LGA+ + KLT L Sbjct: 631 RVSLEVVVLQLKIMGIDDALAFDFIEKPLKTSLVKALEKLYALGALD-----NKGKLTTL 685 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GRQ++ LPV+P A M+L+A + GC EA+ + + LS++ P DK+ + + RF Sbjct: 686 GRQMAGLPVEPMYAVMLLKATELGCAEEALSVVAMLSVESIFYSPRDKKAEAAQSRARFV 745 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 E D + +N++N + S + CR Y+N+ + + + QL+ +++L Sbjct: 746 AYEGDQITLLNVFNGYIQC----GSKQRNKWCRDHYINHRAMTRVESVRLQLKGYLEKLE 801 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKD------ADKQEYTGA--RNARFSIFPGSGLF 661 +P+++ + + +++ G + M+ K Y R+ + P S LF Sbjct: 802 LPIDTSFPDIDPLRKSIVAGFFLNTAMRSVAEGLGGSKTAYKTMCGRSEIVKVHPSSSLF 861 Query: 662 KK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 + PPKWV+ ELV TS+ + R I+ EW+ +A + Sbjct: 862 MRNPPPKWVVYNELVFTSKHYIRSVLVIEKEWLVELAPTFFAKK 905 >UniRef50_Q5KMH9 Pre-mRNA splicing factor, putative n=4 Tax=Fungi/Metazoa group RepID=Q5KMH9_CRYNE Length = 699 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 219/660 (33%), Positives = 342/660 (51%), Gaps = 47/660 (7%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR-GIKGLIGHTQPRR 132 LP+ + ++ +L + + VVIV G+TGSGK+TQLP+ E G G ++ TQPRR Sbjct: 45 RQRLPIYKHREKLLWCVEKYPVVIVVGQTGSGKSTQLPQYLHEAGWTGQNHVVACTQPRR 104 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD-NTMVKLMTDGILLAEIQQDRLLMQY 191 +AA +VA R+AEE+ + G +GY +RF D T +K MTDG+L E D LL +Y Sbjct: 105 VAATSVATRVAEEVGSILGDEVGYTIRFEDLSHPTRTKIKYMTDGMLFRETMMDPLLSKY 164 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN--------- 242 I+IDEAHER D LLG LK+++ +RP+L++II+SATID E F +FN Sbjct: 165 SVIMIDEAHERGAYTDLLLGLLKKIMRKRPELRVIISSATIDAEDFLEYFNTNADGTDRS 224 Query: 243 --NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSG 299 +A I+ + GR +PVEV Y + D QA V +L +E GDIL+F++G Sbjct: 225 KDDAIIVSLEGRMFPVEVCYL------KEPCADYTQAAVQTVFDLHLREPLGDILVFLTG 278 Query: 300 EREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVA 351 EI + L LPLYA L EQ+ +F R+++ +TN+A Sbjct: 279 REEIDQVIQEVADRLLSLPKAAPKLLALPLYATLPPEEQSLIFDPPPRDTRKVIFSTNIA 338 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 E S+T+ GIKYV+D G +I Y+ RT + L P S ASANQR GR GR S G C RL Sbjct: 339 EASVTIDGIKYVVDSGFVKIKTYNPRTCMDVLTTTPCSLASANQRAGRAGRTSAGKCFRL 398 Query: 412 YSEDDF------LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 Y P T PE++R++++ +LQ+ ALG+ ++A F F+ P + Sbjct: 399 YPASILPTTNPSSPMPLTTPPELVRSDISLYLLQLKALGIDNLAKFDFMSPPPSEMMIRA 458 Query: 466 VRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 + L L AI + + + P+G +++++P+DP +A ++L + + C E + I + Sbjct: 459 LEFLFCLKAIDDEGRLTR----PMGERMAEVPLDPMMAAILLNSHEFRCGEEILTIAAMT 514 Query: 526 SIQDPRERPMDKQQA--SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 S+Q+ +A ++ + R+F +E D L +N +N A ++ C Sbjct: 515 SVQNVFITAQGGTKATMAELERRKFTAEEGDHLTLLNAYNAF-----ARYGQNNKQWCGN 569 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQE 643 LNY + I QL++ ++ IP+ S + + L++G + D Sbjct: 570 HRLNYKALSRAMSIRKQLKKYMERFRIPIVSCEGDAIRLRKCLVSGYFKNAAKMMPDGTY 629 Query: 644 YTGARNARFSIFPGSGLFKKPPK--WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + NA + P S +F + P WV+ E+VET++ + R I+ +W+ +A H K Sbjct: 630 RSARENAPLHVHPSSVMFTRQPSTGWVIYHEVVETTKSFMRDLTVINEDWLVELAPHFYK 689 >UniRef50_Q9FZC3 T1K7.25 protein n=12 Tax=Embryophyta RepID=Q9FZC3_ARATH Length = 726 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 217/684 (31%), Positives = 351/684 (51%), Gaps = 72/684 (10%) Query: 78 PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAAR 136 PV + ++E ++ + ++I+ GETGSGKTTQLP+ G +G +IG TQPRR+AA Sbjct: 54 PVEK---RLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAV 110 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 TVA R+AEE + + G +GY +RF D S +T +K MTDG+LL E D L +Y II+ Sbjct: 111 TVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIV 170 Query: 197 DEAHERSLNIDFLLGYLKELLPRRP----------------------------------- 221 DEAH+RS++ D LL LK++ R Sbjct: 171 DEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGY 230 Query: 222 ------DLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQL 275 LK+II SA++D FS +F A + V GR +PV++ Y E D + Sbjct: 231 QGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILY------TVHPESDYV 284 Query: 276 QAIFDAVDELS-QESHGDILIFMSGEREIRDT----ADALNKLNLRHTEILPL--YARLS 328 A + ++ +E GDIL+F++G+ EI + L + ++LPL ++ L Sbjct: 285 DATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALP 344 Query: 329 NSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 + +Q +VF R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L + Sbjct: 345 SEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVV 404 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446 P S+A QR GR GR G RLY E +F + T PEI R NL+++ILQ+ ALG+ Sbjct: 405 PASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGID 464 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 DI F F++ P + I + L LGA+ D + P+G Q+S+LP++P ++ + Sbjct: 465 DIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLEN----PVGYQMSRLPLEPVYSKAL 520 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN--- 563 + A + C+ E +I + LS++ P +K++ + F E D L +++++ Sbjct: 521 ILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESD 580 Query: 564 -YLGEQQKALSSNAF----RRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE 618 +L +++ A S N ++ C+ +Y+N ++ +DIY Q+R+ V+++G V+S + Sbjct: 581 EFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGND 640 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 L + D I P S LF+ P+ V+ EL++TS+ Sbjct: 641 MLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSK 700 Query: 679 LWGRIAARIDPEWVEPVAQHLIKR 702 + + ID W+ +A H + Sbjct: 701 KYIKNLTIIDSLWLSELAPHHFQT 724 >UniRef50_Q4N829 RNA helicase, putative n=2 Tax=Theileria RepID=Q4N829_THEPA Length = 974 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 222/699 (31%), Positives = 382/699 (54%), Gaps = 71/699 (10%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 + + L R+ + + LP+ + ++L AI+ ++ +IV GETGSGKTTQ+P+ E Sbjct: 289 SRLEKLKRKQHKLILQERQKLPIYYYRTELLSAIKKYKTLIVVGETGSGKTTQIPQYLHE 348 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 +G G+IG TQPRR+AA +VA R+++EL + G +GY +RF D+ S NT +K MTDG Sbjct: 349 VGYSRAGVIGITQPRRVAAMSVATRVSKELNVKMGSTVGYCIRFEDYTSSNTKIKYMTDG 408 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 ILL E + L Y I+IDEAHER+L+ D + G +K+L+ R D ++II+SAT++ E+ Sbjct: 409 ILLREFASNPTLENYSVIMIDEAHERTLHTDVIFGLVKDLIRYRNDFRLIISSATLEAEK 468 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS--QESHGDIL 294 F+ +F+NAPI ++ GR YPV++ Y E + L A + ++ Q GDIL Sbjct: 469 FALYFDNAPIFKIPGRRYPVQIYY------TKTPEANYLDASIITILQIHLTQPIDGDIL 522 Query: 295 IFMSGEREIRDTADAL-----NKLNLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLA 347 +F+ G++EI + L N+ ++R IL +Y+ L + QN++F+ R+++L+ Sbjct: 523 VFLPGQQEIEYIQEELIARLKNRKDIRELIILSIYSSLPSDMQNKIFEPTPENSRKVILS 582 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN++ETS+T+ I YVID G ++S YS +T + L + P S+A+ANQR GR GRV G Sbjct: 583 TNISETSITLDNIVYVIDTGFCKLSLYSPKTGLDSLIVVPCSKANANQRSGRAGRVRAGH 642 Query: 408 CIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RLY++ + + +PEI R NL+SV+L + ++G+ D+ F F++ P ++ + + Sbjct: 643 CFRLYTKLSYDKEMEDNHEPEIKRVNLSSVVLLLKSIGIDDLLNFDFMDPPTPESLINSL 702 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL- 525 L+ LG + + LT LG+ +S+LP+DP ++ +L + +H C + +II S L Sbjct: 703 ELIYSLGCLNDSGE-----LTKLGKIMSELPLDPMYSKSLLFSIQHNCHEDIIIILSMLI 757 Query: 526 -SI----------------------QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562 SI + P D++ ++ ++ F++ SD L +N++ Sbjct: 758 QSIFYLVIHSFNLHTYPNSISQRLGNNIFYIPKDRRIHAENNYKNFYNNNSDHLMLLNVY 817 Query: 563 NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI------------ 610 N E +++ C +YL Y + + Q+I QL+ ++ L + Sbjct: 818 NQWKENDFSIA------WCYENYLQYKSLIQIQNIIQQLQNLITRLNLVDGDTVNGDVQN 871 Query: 611 -----PVNSEPAEYREIHIALLTGLLSHIGMKD---ADKQEYTGARNARFSIFPGSGLFK 662 + S I +++G +++ +K+ ++K T I P S +FK Sbjct: 872 NQKDKEIGSNMNYNDVIMKCIVSGFFTNVAVKNEKKSEKNYKTIKSKQVVYIHPNSSVFK 931 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + K+V+ +LV T++ + R + I +W+ +A H + Sbjct: 932 QNIKFVVYNDLVLTTKHFIRQVSEIQAKWLMELAPHYYQ 970 >UniRef50_A8IHD9 DEAH-box nuclear pre-mRNA splicing factor n=2 Tax=Viridiplantae RepID=A8IHD9_CHLRE Length = 689 Score = 740 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 227/640 (35%), Positives = 345/640 (53%), Gaps = 33/640 (5%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-----LIGHTQP 130 LP + +L ++ H+ +++ GETGSGKTTQ+P+ + G I TQP Sbjct: 40 QLPAWAARDKLLALLQQHRTLVLVGETGSGKTTQIPQFLLAAKFGKSSGSKGACIAVTQP 99 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA TVA R+AEE+ T+ G +GY +RF D S T +K MTDG+LL E D LL + Sbjct: 100 RRVAAMTVARRVAEEMGTKIGQQVGYAIRFEDVTSPATRIKYMTDGLLLREALVDPLLSR 159 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRR-PDLKIIITSATIDPERFSRHFNNAPIIEV 249 Y ++IDEAHER+++ D LLG +K + RR D ++++ SAT+D RF +F A V Sbjct: 160 YRVVVIDEAHERTVHTDVLLGLIKGVQARRGDDFRLVVMSATLDAARFVDYFPGAVAALV 219 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTAD 308 GR +PV+V Y E + L A +A ++ +E GD+L+F++G+ EI Sbjct: 220 RGRQFPVQVLY------TARPEDNYLDAAINATLQVHGEEPEGDVLVFLTGQDEIDSAER 273 Query: 309 ALNKL-----NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIK 361 L R +LP+YA L +Q +VF+ R+ +LATN+AETS+T+PG++ Sbjct: 274 LLKAAAAVGGRPRELLVLPIYAALPPEQQMKVFEPAPPGTRKAILATNIAETSITIPGVR 333 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVID G + Y+ + ++ L + P+SQA A QR GR GR G RLY+E DF Sbjct: 334 YVIDTGHVKARDYNAKLGLESLAVVPVSQAQARQRSGRAGREGPGKAYRLYTEADFSQLA 393 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 T PEI R NLASV+LQ+ A+G+ D+ F F++ P + I + LL LGA+ Sbjct: 394 ATTPPEITRCNLASVVLQLKAMGIDDVLGFDFMDPPPRTAILRSLELLFALGALD----- 448 Query: 482 SAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 ++ KLT +G +LS+LPVDP R++L A + GC EA+ + + +S + P K+ Sbjct: 449 NSGKLTEEVGLRLSRLPVDPMFGRVLLAAAELGCGVEALAVVAMVSADNVFHTPRQKEAE 508 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +F +E D L +N++ E K S A C +++N +R+ +DIYTQ Sbjct: 509 WRAARLKFLSREGDHLTLLNVFRGFMELPK--SHKARTGWCSDNFINIRALRKAEDIYTQ 566 Query: 601 LRQVVKE-----LGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 L + + LG+P+ + E + AL GL H D A + + Sbjct: 567 LVRFMGHPCPPGLGLPLATCGDETTPLRRALTAGLFPHAARLQPDGSYRVIATGRQVFLH 626 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 P S L ++ P ++ EL+ T+R + R A I+ W+ + Sbjct: 627 PSSVLLERKPDCLVFNELMHTTRTYARDATAIEARWLPEL 666 >UniRef50_A7E6W3 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E6W3_SCLS1 Length = 696 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 238/708 (33%), Positives = 365/708 (51%), Gaps = 81/708 (11%) Query: 59 GKVLLREAARPEITYPDNL-PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 L P + P +L P++Q ++ +L I + V IV G TGSGKTTQ+P+ + Sbjct: 2 ADFDLSSNFIPALHKPSSLLPIAQHRESLLYLIESYPVTIVIGHTGSGKTTQIPQFLEKA 61 Query: 118 GRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 G G I TQPRR+AA TVA R+AEE+ E G +GY +RF D S T +K +TDG Sbjct: 62 GWCANGKQIAVTQPRRVAATTVAIRVAEEVGCEVGKEVGYSIRFEDVTSAATKIKFLTDG 121 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP-DLKIIITSATIDPE 235 +LL E D LL +Y I++DEAHERSL+ D LLG LK++L +RP DL+III+SAT+ E Sbjct: 122 LLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGVLKKILKKRPNDLRIIISSATLQAE 181 Query: 236 RFSRHFNNAP------------------------------------IIEVSGRTYPVEVR 259 F F+N P II + GR YPV++ Sbjct: 182 DFLNFFSNDPEVEAKPNVDDAMTLDDLIAQGSSSTNGSKNDGKIGQIISLEGRMYPVDIL 241 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL----- 313 Y ++ D L+ D V ++ +E GDIL+F++G EI A+++ Sbjct: 242 YL------ENPAEDYLERAIDTVFDIHTKEPDGDILVFLTGREEIDKAVQAISERAASLH 295 Query: 314 -NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 + LPLYA LS +Q VF+ + R+++ +TN+AE S+T+ GI YV+D G + Sbjct: 296 PRSQALMPLPLYAGLSTEQQMFVFELAQENTRKVIFSTNIAEASVTIDGIIYVVDCGFVK 355 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 + Y+ T ++ L PIS+ASA QR GR GR G C RLY+E +F + E T PEI R Sbjct: 356 LRAYNPITGIETLTATPISKASATQRSGRAGRTKPGKCFRLYTEANFQALEEATVPEIQR 415 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PL 489 +NLA +ILQ+ ALG+ +I FPF+ +P I G+ LL LGA+ + KLT PL Sbjct: 416 SNLAPIILQLKALGIDNIVRFPFLTSPPAELIIRGLELLYSLGALD-----TYAKLTKPL 470 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQASDEKHRRF 548 G ++++L V+P +A+ +L A C+ E + I + S+ + D+++A + R+F Sbjct: 471 GTRMAELAVEPMMAKTLLSASSFNCLSEILTIAAMTSVGGNIFYNDYDEKKAMETAKRKF 530 Query: 549 HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 +E D + +N++ + K R C +YLN+ + + I +QL++ ++ Sbjct: 531 AVEEGDHITLLNIYQSFITKGK-----KQPRFCHDNYLNFKALSKAISIRSQLKRYLERF 585 Query: 609 GIPVNSE--------------PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 GI ++ P + +I L TG +H D Sbjct: 586 GISIDETLSSSSNPNMLSVGGPDKSEQIRRCLTTGYFAHAAKMQPDGTFRNIGGGTILHA 645 Query: 655 FPGSGLFKKPPKWVMVAELVET-SRLWGRIAARIDPEWVEPVAQHLIK 701 P S +F + +WV+ +E+VE ++++ R +RI+ W+ A K Sbjct: 646 HPSSLMFNRKCEWVVFSEVVELGAKVYIRDLSRIEKGWLVEYAPEFYK 693 >UniRef50_A5DQ95 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DQ95_PICGU Length = 1084 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 221/734 (30%), Positives = 353/734 (48%), Gaps = 58/734 (7%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQ-------EMAKEIDQAAGKVLLREA 66 L R + R ++ K ++ ++ +E + +A E Sbjct: 311 SELAISAKRGSFVVNERRSKNERAKQAKDSSSLQGTALGNVLQIKEEKEVSATTSGAEEK 370 Query: 67 ARPEI--TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG- 123 E+ +LP + ++L I ++QV +V GETGSGKTTQL + +E G G Sbjct: 371 VDKELIQKQRKSLPAFAVRHELLRTIAENQVTVVIGETGSGKTTQLTQFLLEDGFGSNLA 430 Query: 124 ------LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSD-HVSDNTMVKLMTDG 176 +IG TQPRR+AA +VA R++EE + G +GY +RF D + T++K MT+G Sbjct: 431 KNGERLMIGCTQPRRVAAMSVAKRVSEEYGCKLGEEVGYSIRFEDVTTKEKTIIKYMTEG 490 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 +LL EI D L Y II+DEAHERSL+ D LLG + L+ RR DLK+IITSAT++ ER Sbjct: 491 VLLREILMDANLEHYSCIIMDEAHERSLSTDVLLGLFRNLIRRRKDLKLIITSATMNAER 550 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-------QES 289 F F + P + GRT+PV+ + T D + A V + + + Sbjct: 551 FMNFFGDVPQFTIPGRTFPVDTLFS------KSTCSDYVDAAVKQVMTIHLQNYSKYKRN 604 Query: 290 HGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHS--GR 342 GDIL+FM+G+ +I T + + + + ++ P+Y+ + Q ++F S R Sbjct: 605 DGDILVFMTGQEDIEMTCELVREKLALLDDPPPLDVYPIYSTMPADLQRKIFDKPSETRR 664 Query: 343 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGR 402 ++V+ATN+AETSLTV GIKYV+D G ++ Y+ + + L + PIS A+A QR GR GR Sbjct: 665 KVVVATNIAETSLTVDGIKYVVDTGLVKLKVYNPKLGMDTLQVVPISLANAQQRSGRAGR 724 Query: 403 VSEGICIRLYSEDD--FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 G+ RLY+E S PEI RTNL +V+L + +L + D+ FPF+++P Sbjct: 725 TGPGLAYRLYTERAIGEDSMYIQPIPEIQRTNLTNVMLLLKSLKVEDVTKFPFLDSPPTD 784 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQ--KHGCVREA 518 + + + L + A+ + LT LG + P++ L++++ + + C E Sbjct: 785 LLSNSLYDLWIMEALD-----NCGNLTSLGHNMMVFPIEATLSKLIFLSCRPQFSCSSEI 839 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 + I S LS+ RP ++ Q SD RF ESD L +N++N Q+ A Sbjct: 840 VTIVSMLSVPSVFFRPKERAQESDAARERFFVAESDHLTLLNVYNQYETQRSKGRKTAA- 898 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD 638 C ++L++ + +DI QL ++K+ +P+ + I L Sbjct: 899 -WCSKNFLHHKSLSRARDIRNQLILIMKKNKLPI-LKSTNNDTIRKCLCAVYFHQSATLA 956 Query: 639 A----DKQEYTGARNAR--FSIFPGSGLF---KKPPKWVMVAELVETSRLWGRIAARIDP 689 YT R + + P S L + V+ EL+ T++ + +DP Sbjct: 957 KTDFNKGSVYTHLRQSYMNMHLHPTSALNSGAEAMASHVIYHELILTTKEYMSCVTVVDP 1016 Query: 690 EWVEPVAQHLIKRT 703 W+ T Sbjct: 1017 VWLLEFGAIFFDTT 1030 >UniRef50_UPI0001925C54 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 35, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001925C54 Length = 748 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 218/652 (33%), Positives = 357/652 (54%), Gaps = 39/652 (5%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-KGLIGHTQPRR 132 LP + + +L + +Q VI++ TGSGK+TQ+P+ E G K +IG TQPRR Sbjct: 49 RQRLPSFKYRNAVLYLLEKYQTVIISASTGSGKSTQIPQYLYEAGWTNEKKIIGITQPRR 108 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQY 191 +A +VA+R+AEE+ T G +GY +RF D + T +K +TDG L+ E+ D LL QY Sbjct: 109 VAVTSVASRVAEEMGTALGREVGYSIRFEDCTDKDLTKIKFLTDGYLVREMMADPLLSQY 168 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN--------- 242 +++DE HER+L D ++G LK++L +RPDL++II+SAT+D +++ + FN Sbjct: 169 SVLMLDEVHERTLYTDVIIGLLKKILRKRPDLRLIISSATLDADQYQKFFNIKKSVNKAE 228 Query: 243 -NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGE 300 + I+E+ GRT+PV++ Y + +++ D V + + S GDIL+F++G+ Sbjct: 229 VTSVILEMEGRTFPVDIFYLQAAIP------NYVKSAVDTVINIHKSYSDGDILVFLTGQ 282 Query: 301 REIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAE 352 E+ + + N+++ +LPLY L +EQ +VFQ + R++V++TNVAE Sbjct: 283 DEVENALQLIQNEINLLPKNIQNVLLLPLYGGLPMAEQLKVFQRAPPNTRKVVVSTNVAE 342 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 S+T+ GI YVID G ++ Y+ + + L I PIS+ASA QR GR GRV G RLY Sbjct: 343 ASITISGIVYVIDSGFVKLKAYNAASGLDSLVITPISKASAAQRSGRAGRVRAGKAYRLY 402 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 E +F FT PEI RTNLASVILQ+ +LG+ ++ F F+ AP + + +G+ LL L Sbjct: 403 PECEFDKLSLFTIPEIQRTNLASVILQLKSLGISNVLRFNFLSAPPAQLMINGIELLFAL 462 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 GA+T + + PLG Q+++ P++P L++M+L + C EA+ + + L I++ Sbjct: 463 GALTEEGNLTE----PLGVQMAEFPLNPMLSKMLLCSGNFQCSEEAVTLAAMLQIENVFV 518 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 + + RF KE D L +N++ + K++ C +LNY + Sbjct: 519 AVPNMKNKVTRSKLRFAAKEGDHLTLINVYRAFIKHGKSMD------WCHKHFLNYKSLV 572 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 + QL ++K+ IP+ S + I +++G +++ + T N Sbjct: 573 RVVKVRNQLISILKQYDIPIVSCKEDDEAIRKCIISGFFANVAKYHPSGEYRTVRDNRSL 632 Query: 653 SIFPGSGLFK--KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 + P S L PPK ++ E++ TS+ + R A I W+ +A + Sbjct: 633 YLHPSSVLSSITPPPKLLIFNEVLCTSKDYMRDATDIKLSWLLELASSYYEY 684 >UniRef50_B3SBV6 Putative uncharacterized protein n=2 Tax=Fungi/Metazoa group RepID=B3SBV6_TRIAD Length = 679 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 223/696 (32%), Positives = 349/696 (50%), Gaps = 85/696 (12%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 +RL ++ + E I+ K + + LPV + K+ IL Sbjct: 21 KKRLDVGSNGQSRNVTDGARSENRSNIN-PYNKQAYSDRYYDILKKRTKLPVWEYKEKIL 79 Query: 88 EAIRDHQVVIVAGETGSGKTTQ-----------LPKICMELGRGIKGLIGHTQPRRLAAR 136 +R +Q ++ GETGSGKTTQ +P+ C+EL G +G + TQPRR+AA Sbjct: 80 STLRKNQATVLVGETGSGKTTQFKQRDVWGGSYIPQWCVELVSGRRG-VACTQPRRVAAM 138 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R++EE+ G +GY +RF D S NT++K MTDG+LL E D LL +Y I++ Sbjct: 139 SVAQRVSEEMDVTLGQQVGYSIRFEDCTSPNTLLKYMTDGMLLREAMNDPLLERYSVILL 198 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+L D L+G LKE++ R DLKI+I SAT+D +F +F AP++E+ Sbjct: 199 DEAHERTLATDILMGLLKEIVSNRSDLKIVIMSATLDAGKFQDYFEGAPLLEIE------ 252 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR 316 D + I V L E+ GD+ Sbjct: 253 ----------------DACRRIRQEVQNLGNEA-GDV----------------------- 272 Query: 317 HTEILPLYARLSNSEQNRVFQSHS-------GRRIVLATNVAETSLTVPGIKYVIDPGTA 369 +++PLY+ L S Q R+F+S GR+IV++TN+AETSLT+ G+ +V+DPG A Sbjct: 273 --KVIPLYSTLPPSAQQRIFESAPPSRNERIGRKIVISTNIAETSLTIDGVVFVVDPGFA 330 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEI 428 + Y+ R +V+ L + PIS+AS+ QR GR GR G C RLY+E F E T PEI Sbjct: 331 KQKVYNPRIRVESLLVTPISKASSQQRAGRAGRTRPGKCFRLYTEKAFQTEMQENTYPEI 390 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 LR+NL +V+L + LG+ D+ F F++ P + + LL LGA+ D LT Sbjct: 391 LRSNLGTVVLHLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALNDDGD-----LTD 445 Query: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548 LG +++ P+DP+LA+M++ + + C E + ITS LSI RP D ++A+DE +F Sbjct: 446 LGSLMAEFPLDPQLAKMLIASTGYNCSNEILSITSMLSIPQVFLRPNDAKKAADEAKAKF 505 Query: 549 HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 + D L +N+++ + ++ + C ++L ++ ++ QL ++ + Sbjct: 506 GHIDGDHLTLLNVYHAYKQNKED------SQWCYDNFLQSRSLKSADNVRQQLAGIMDKH 559 Query: 609 GIPVNSEPAE----YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 +P S Y I AL+ G + T N + P + L K Sbjct: 560 SLPRKSTDFNSRDYYLNIRKALVAGFFMQAAHLERAGHYLTVKDNQVVHLHPSTCLSHK- 618 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 P+WV+ E V T++ + R + P+W+ + + Sbjct: 619 PEWVIYNEFVLTTKNYIRTVTEVKPDWLVTASPNYY 654 >UniRef50_UPI000050FFFD ATP-dependent helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FFFD Length = 1354 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 361/567 (63%), Positives = 443/567 (78%), Gaps = 24/567 (4%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++TYP+NLPVS K +I EAIRD+QVVIVAGETGSGKTTQLPKIC+ELG G+ GLIGHTQ Sbjct: 2 DVTYPENLPVSAAKDEIAEAIRDNQVVIVAGETGSGKTTQLPKICLELGLGVNGLIGHTQ 61 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AARTVA RIA+EL + GG IGY+VRF+ V+D+T VK+MTDGILL+E+ +D+LL Sbjct: 62 PRRIAARTVAERIADELGEDLGGTIGYQVRFTAQVADSTRVKVMTDGILLSELSRDKLLR 121 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 Y+ IIIDEAHERSLNIDFLLGYLKE++ +RP+LK+IITSATIDP+ F+ HF++APIIEV Sbjct: 122 DYEVIIIDEAHERSLNIDFLLGYLKEVMGKRPELKVIITSATIDPQSFAAHFDDAPIIEV 181 Query: 250 SGRTYPVEVRYRPIVE--------------EADDTERDQLQAIFDAVDELSQESHGDILI 295 +GRTYPVEVRYRP+V+ + +Q + I A DELS E+ GDIL+ Sbjct: 182 AGRTYPVEVRYRPLVDDDEDDDVDGPGESGSYETGPEEQTEGIIAAFDELSTEAPGDILV 241 Query: 296 FMSGEREIRDTADALN-----KLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 F+SGEREIRDTA+AL + L + E++PL+ARLS EQ +VF+ HS R+VLATNV Sbjct: 242 FLSGEREIRDTAEALEAHLRKRPRLSNWEVVPLFARLSAGEQQKVFKPHSRPRLVLATNV 301 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGIKYVID GTARISRYS RT+VQRLPIE ISQASANQRKGR GR S+GICIR Sbjct: 302 AETSLTVPGIKYVIDVGTARISRYSNRTRVQRLPIERISQASANQRKGRSGRTSDGICIR 361 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG----DIAAFPFVEAPDKRNIQDGV 466 LYSE DF SRPEFTDPEILRTNLASVILQMT LG +I FPF+ P+ + ++DG Sbjct: 362 LYSETDFDSRPEFTDPEILRTNLASVILQMTDLGFAASDKEILDFPFLTPPEAKAVRDGR 421 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 +L ELGA+T+D+ + +TP GRQLS LP+DPRLARMV+ + GC E II +ALS Sbjct: 422 TMLAELGALTSDKAGTIT-VTPTGRQLSLLPIDPRLARMVIAGAEAGCGGEVTIIVAALS 480 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 IQDPRERP + + A+DEKH RF SDFL+++NLWNYL +QQ AL+S+ FRR C+ ++L Sbjct: 481 IQDPRERPTEVRAAADEKHARFTHPGSDFLSYLNLWNYLDDQQSALTSSKFRRQCKAEFL 540 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVN 613 N++R+REWQD+ QLR + GI VN Sbjct: 541 NFVRIREWQDLVGQLRSLSGSAGIRVN 567 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 247/706 (34%), Positives = 365/706 (51%), Gaps = 36/706 (5%) Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 IH ALLTGLLS IG + ++Y GAR RF+IFPGSGLFKK P +VM AELVETSRLW Sbjct: 657 AIHRALLTGLLSMIGSRSERNKDYQGARGTRFAIFPGSGLFKKKPDFVMAAELVETSRLW 716 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R + I+P+WV A L+ R YS+PHW + G M EK+++YG+ +V+ R+V Y Sbjct: 717 ARTVSAIEPDWVVEAAGDLVTRQYSDPHWSKKAGGSMVYEKISLYGVTLVSDRRVGYGTF 776 Query: 741 DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYD 800 D R++FIR L+EGDW R F N + E E L ++R +L D+ LFEFYD Sbjct: 777 DREAARDMFIRKGLIEGDWHERFGFLETNAAVIDEAEALASRTRNSRVLDQDDALFEFYD 836 Query: 801 QRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKIS---KLDYPNFWHQ-GN 856 +RI + SA F +WWKK R +L+ S+L+ + +E+++ D+P W Sbjct: 837 ERIPATITSAADFRAWWKKQKRRDSHILDLSTSILLSDDSEELTASVADDFPMEWELVDG 896 Query: 857 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 916 +L Y FEPG+ DGVTV +P + V+ F WQ+PGLR ELV A I+SLPK RR Sbjct: 897 STAKLRYSFEPGSTEDGVTVELPAAAVPLVDSDEFSWQVPGLREELVAAYIRSLPKNKRR 956 Query: 917 NFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG---------VTVDREDWHWDQVPD 967 FVPAP+ A L + P L + L +L G +TV ED+ ++P Sbjct: 957 YFVPAPDVARDILPVLTPYRGALPEVLAAQLSERAGGGGLNDLVPITVTAEDFDLGRIPP 1016 Query: 968 HLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPE 1027 HL+I FRV+D + G L+ L K +V++ A Q+G+ WSFG L Sbjct: 1017 HLRIRFRVID-GTTTVGIGEDLKKLTKTAKPQVRKA-RAQQVSFTAQTGMTSWSFGALTN 1074 Query: 1028 SYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHE 1087 E + G A P LVD SV + FD + + + GL LL L +KYL + Sbjct: 1075 PDEAEVG-----AVPGLVDRGTSVDLVAFDTAAQARLSSREGLITLLSLRTNEALKYLRD 1129 Query: 1088 KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP-----VWTEEGFAALHEKVR 1142 L KL L + E++ + G+ +++A G V F +L KV Sbjct: 1130 GLTTDEKLVLAGHQKTS-DEMLHALVRAGIRSVVEAELGAAETGWVADAVEFGSLETKVH 1188 Query: 1143 AELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNG 1202 A L D + + + L + ++K + + + L+D++A G V V Sbjct: 1189 AALTDMCASLLPHLMKALRSATELDKLVSKASSLAILSNLADVQAWRGSRVTGASVAAMS 1248 Query: 1203 FKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI-NKLPPARRED--- 1258 + + + R++QA R++ + P RD+ M +V + + + N+ P + D Sbjct: 1249 GQMVRELPRWVQAEVVRIDGMQNSPMRDKQLMDRVSGSTDSVMKKVGNRFPELSKADWSK 1308 Query: 1259 ------EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + +++ M+EELRVS +A LGT +P+S+KRI +A+ Q+ Sbjct: 1309 VVVSVPSEWRDVIIMLEELRVSLYANSLGTAHPVSEKRIAKALAQL 1354 >UniRef50_B4JQ72 GH13648 n=1 Tax=Drosophila grimshawi RepID=B4JQ72_DROGR Length = 698 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 233/688 (33%), Positives = 363/688 (52%), Gaps = 40/688 (5%) Query: 29 RRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILE 88 + + +KK N + Q + K + A +LPV +Q IL+ Sbjct: 29 KEQNAIKKPTNNNFNQQQKPNLYKNVLAANSNKRSSIDQE-----RRSLPVYNCRQRILK 83 Query: 89 AIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKT 148 + + +++ GETGSGKTTQ+P+ ++ G G+IG TQPRR+AA T+A R+A+EL T Sbjct: 84 ELEANDTLLIMGETGSGKTTQIPQFLLQAGYANGGIIGITQPRRVAAITIAKRVAQELAT 143 Query: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 G +GY VRF D ++ T ++ MTDGILL E DRLL +Y I++DEAHER++N D Sbjct: 144 GIGETVGYTVRFEDATTERTRIRYMTDGILLREAIGDRLLRKYSAIMLDEAHERTVNADV 203 Query: 209 LLGYLKELLPRR-----PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPI 263 L G +K+ R P LKIIITSAT+D + F ++F + + GRT+PV V + Sbjct: 204 LFGIVKQAQLERAKQRLPKLKIIITSATMDIDHFGQYFGVRGM-YLEGRTHPVRVLH--- 259 Query: 264 VEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGEREIRDTADALNKL------NL 315 A D++ D + A + ++ + D+LIF++G+ EI A + +L Sbjct: 260 ---AKDSQEDYIHAALVTLFDIHRHEPINHDVLIFLTGQEEIEALAQQIRQLARINNTGP 316 Query: 316 RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 + LYA+L+ +Q F + R+IVLATN+AETS+T+PGI+ VID G + Sbjct: 317 SDVRVFTLYAQLAQGKQLECFLPVPANTRKIVLATNIAETSITIPGIRCVIDCGYVKEKS 376 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 ++ T ++ L ISQA A QR GR GR + G C R YS+ + PEILR+NL Sbjct: 377 FNPGTGLELLKTVRISQAQAWQRCGRAGRDAPGKCYRTYSKASMEQFRSTSLPEILRSNL 436 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 S +LQ+ ALG+ D + F F++AP I R LE+LGAI + + +T GR + Sbjct: 437 TSTVLQLLALGI-DCSNFDFIDAPPPEGISSAHRALEQLGAI----KPAPLVITTTGRWM 491 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKES 553 +Q P+DPR A+++L A GC+ E + + +ALS + DK + + H +F K Sbjct: 492 AQFPLDPRYAKLLLSAPSFGCMEEMLSLVAALSSDNVFIGHTDKSELAALAHAKFQSKHG 551 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613 D L +N+++ + +K + C ++LN + +++ QL ++ L + +N Sbjct: 552 DHLTLLNVFSTFQKTEKP------KIWCHDNFLNIRNLTYARNVRNQLAEISGRLNLAIN 605 Query: 614 SEPAEY-REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK-PPKWVMVA 671 S + + LLTGL +I + + T + + I P S L K P+ ++ Sbjct: 606 SCGGDNVDAVKKCLLTGLFENIALLQKEGHYLTVSGRVKAKIHPSSVLHGKYKPQCILFT 665 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHL 699 E+V+T + R I EWVE V + Sbjct: 666 EMVQTEHNFLRQVTEISSEWVEEVLPAM 693 >UniRef50_A4S4Y0 Predicted protein n=3 Tax=Mamiellales RepID=A4S4Y0_OSTLU Length = 679 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 224/654 (34%), Positives = 356/654 (54%), Gaps = 38/654 (5%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQP 130 +LP+ + K ++E IR + VI+ GETGSGKTTQ+P+ E G +IG TQP Sbjct: 37 RVRKSLPIYRAKDRLMEEIRKSETVIIIGETGSGKTTQIPQYVYEDMTLTNGLMIGVTQP 96 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA +V+ R+A+E T G +GY +RF D S+ T +K +TDG+LL E D LL + Sbjct: 97 RRVAAVSVSRRVADETGTAHGTLVGYAIRFEDVSSEETRIKFLTDGMLLREAVGDPLLSK 156 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRR-------------PDLKIIITSATIDPERF 237 Y I+IDEAHER+L DFLLG +K + RR P L++I+ SAT++ F Sbjct: 157 YGVIMIDEAHERTLQTDFLLGTIKGVQRRRRESLGEDQYGRALPPLRVIVMSATLEASSF 216 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILIF 296 S+ F+ AP+I GRT+PVE+ Y ++ E D L A V ++++E GD+L+F Sbjct: 217 SKFFDGAPVIYSRGRTFPVEMFY------TEEPEEDYLDAAMWTVLQVNEEEAAGDVLVF 270 Query: 297 MSGEREIRDTADALNK------LNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLAT 348 ++G+ EI L + N+ ++ L+A L EQ +VF+ R++VLAT Sbjct: 271 LTGQEEIESLGRMLREKASELPSNVLKLNVVLLFAALPPEEQMKVFEPTPLGTRKVVLAT 330 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLT+ GI+YV+D G +++ + R+ V L + PI+Q+ A QR GR GR + G C Sbjct: 331 NIAETSLTINGIRYVVDSGLSKLRTHHPRSGVDELLVTPIAQSQAQQRAGRAGREAPGKC 390 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RLY+E+ S ++ PE+LRTNL+ V+LQ+ A+ + DI +FPF++ P K + + L Sbjct: 391 FRLYTEEIMPSLEKYVKPELLRTNLSGVVLQLKAMQVDDILSFPFIDPPPKEALLRSLEL 450 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L L A+ D KL +G+++++ P++P AR V+ A+ GC E + + S LS Sbjct: 451 LYSLDALDDDG-----KLNDVGKKMARFPLEPMAARCVIAAEIEGCAIETLAVLSMLSTD 505 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 + + + + KE D L + ++N A S R CR +N+ Sbjct: 506 SVFQFSREADGQKNVARHKLKRKEGDHLTLLRVFNEF----SACSPKRSRDWCREHQINH 561 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR 648 + + I QL + GI + S ++ + +L++G + K+ D Sbjct: 562 RAMTKAVKINEQLTRAAMSQGINLTSCEDDFTLVLRSLVSGFFMNTASKEMDGSFKVFTT 621 Query: 649 NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 + +I P S +F+ PP+ ++ ELV T++++ R + I W+ +A R Sbjct: 622 GQKLTIHPSSVMFQSPPETILFNELVRTNKMYARDVSSIKKSWLSELASKTFSR 675 >UniRef50_Q9VL25 CG4901 n=10 Tax=Drosophila RepID=Q9VL25_DROME Length = 694 Score = 727 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 221/662 (33%), Positives = 351/662 (53%), Gaps = 34/662 (5%) Query: 52 KEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLP 111 +I Q +LL +LPV + IL+ + + V++ ETGSGKTTQ+P Sbjct: 43 AQIKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIP 102 Query: 112 KICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVK 171 + + G G+IG TQPRR+AA TVA R+A+EL G +GY VRF D S T ++ Sbjct: 103 QFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIR 162 Query: 172 LMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD-----LKII 226 +TDG+LL E +DRLL++Y II+DEAHER++N D L G +K+ R LK++ Sbjct: 163 FLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVV 222 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 +TSAT+D + F +F N + + GRTYPV V + + D + + + + Sbjct: 223 VTSATMDIDHFGNYF-NCKGMYLEGRTYPVRVMH------TKEEHEDYIHTVLVTLFHIH 275 Query: 287 QESHG--DILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVF-- 336 + + D+LIF++G+ EI A + +L + LYA+LS +Q F Sbjct: 276 RTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVP 335 Query: 337 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 + R+++LATN+AETS+T+PGI+ VID G + ++ + L IS+A A QR Sbjct: 336 TPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQR 395 Query: 397 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GR ++G C R Y++ + S + T PEILRTN S++LQ+ AL + D F F++ Sbjct: 396 AGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDP 454 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 P + ++ + L+ LGAI T + + +TPLGRQ+ Q P+DP+ ++++L A GC+ Sbjct: 455 PLEDGLRSAYKSLDALGAIKTGDDSY---ITPLGRQMVQYPLDPKYSKLLLTASSFGCME 511 Query: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA 576 E + + S LS +K + + H +F K D L +N++N L S Sbjct: 512 EILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF------LKSEK 565 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 + C +YLN + +++ QLR++ + L + +NS + + +L G +I + Sbjct: 566 PKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSD-DIEMLKKCILNGFFENIAV 624 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKK-PPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 D T + N R I P S L K P +++ E+V+T + + R I EW++ V Sbjct: 625 LQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEV 684 Query: 696 AQ 697 Sbjct: 685 VP 686 >UniRef50_Q0UY60 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UY60_PHANO Length = 857 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 229/698 (32%), Positives = 364/698 (52%), Gaps = 65/698 (9%) Query: 48 QEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 Q + +D+A K + R +LP+ + +++ ++A+ +HQ++++ G TGSGKT Sbjct: 161 QRLQANLDEAEVKAKNIDDTRK------SLPIYKYREEFIQAVSEHQIIVLVGATGSGKT 214 Query: 108 TQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD 166 TQL + E G IG TQPRR+AA +VANR+A E+ T+ G +GY VRF +SD Sbjct: 215 TQLTQYLNESGYAKNSLRIGCTQPRRVAAISVANRVAAEVGTKIGRRVGYSVRFESAMSD 274 Query: 167 NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII 226 +T ++ MTDG+ L D L Y +I+DEAHER+L D L+ LKE+ RP+ ++I Sbjct: 275 DTQIEYMTDGLALRLCLTDPTLSDYSVMILDEAHERTLATDILMSLLKEICLARPEFRLI 334 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 I SAT+ ++FS +F++API+ + GRT+P+ + E + L A V ++ Sbjct: 335 IASATLAAQKFSTYFHDAPIMNIPGRTFPI------TKAHSTQPEANYLSAAVTTVFQIH 388 Query: 287 -------QESHGDILIFMSGEREIRDTADALNK------LNLRHTEILPLYARLSNSEQN 333 + GDILIF +GE EI AD +N + P+Y L + Q Sbjct: 389 LGSNGSMNDVKGDILIFFTGEEEILAAADYINDTQKKLGSRSPPLIVAPVYGALPSEAQQ 448 Query: 334 RVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 +F R++VLATN+AETSLT+ GI YVID G + + ++ T + L P S+A Sbjct: 449 LIFNPAPPGSRKVVLATNIAETSLTIDGISYVIDCGLEKQNSFNAATNMASLVTVPCSRA 508 Query: 392 SANQRKGRCGRVSEGICIRLYSE-DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA 450 SA QR GR GR G+ RLY++ + PE + PEILR +L +L + A+G+ D+ Sbjct: 509 SAEQRAGRAGRTGPGMAFRLYTKYAFYHELPESSLPEILRISLDGPVLTLKAMGIHDVLH 568 Query: 451 FPFV------------------EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 F F+ +AP + + L LG + ++ +T LGR+ Sbjct: 569 FDFMVRISYPEVQIGTLANHPQDAPPVEALAASLETLYALGYLDSNG-----AVTKLGRR 623 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQASDEKHRRFHDK 551 S+LP+DPRLA+++L A GCV E + + + + P DK+ A++ RF Sbjct: 624 ASELPLDPRLAKVLLTADSLGCVDEIVTLVAMVQEAGTLFFAPKDKKVAAEHAKARFTSS 683 Query: 552 ----ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 D +AF+N+WN E +++ CR +++ Y + +D+ QL ++ + Sbjct: 684 VAGTGGDLIAFLNVWNEFVENDYSVT------WCRDNFVQYRCLNRVRDVRDQLVKLCER 737 Query: 608 LGIPVNSEPA-EYREIHIALLTGLLSHIGMKDADKQEYTGARNA-RFSIFPGSGLFKKPP 665 + I +S EY +I A ++G +++ + D Q Y + +I P S L P Sbjct: 738 VEIFESSCGVHEYVKILKAFVSGYFANVARLNRDGQTYRTLKQGLSVNIHPSSCLRDVRP 797 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 K ++ AELV TS+ + R A I+P W+ +A H K+ Sbjct: 798 KLIVFAELVLTSKEFARTCAPIEPAWLTEMAPHYHKQK 835 >UniRef50_Q38AN5 Pre-mRNA splicing factor ATP-dependent RNA helicase, putative n=7 Tax=Trypanosomatidae RepID=Q38AN5_9TRYP Length = 1062 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 219/666 (32%), Positives = 350/666 (52%), Gaps = 38/666 (5%) Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + + E + +LP+ + L+ + H V ++ GETGSGKTTQ+P+ +E G Sbjct: 383 RFGMMETSESLAEQRRSLPIYAFRDRFLQHVDAHAVTVLVGETGSGKTTQIPQYLVEHGY 442 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 G G++ TQPRR+AA T+A R+AEE G +GY VRF D S T +K MTDG+LL Sbjct: 443 GKNGVVCCTQPRRVAAETLAIRVAEEYGCRLGEEVGYTVRFRDVTSSLTCIKYMTDGMLL 502 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 E D +Y II+DEAHERS+N D L ++ +RP LK+I+TSAT++ E+F Sbjct: 503 REALLDDSFQRYSVIILDEAHERSVNTDLLFAIVRNATHKRPTLKVIVTSATLEREKFCS 562 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMS 298 +FN + + GRT+PV+ + + D L V +L +E GD+L+F++ Sbjct: 563 YFNVHDVFFIEGRTFPVDTYFLA------EPTEDYLDCALKTVMKLHLEEPPGDVLVFLT 616 Query: 299 GEREIR----------DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVL 346 G+ EI + L+ L + ILPL A L Q+RVF+ R++VL Sbjct: 617 GQEEIEFGGDRLFRWMERLRGLSDLPVPDMLILPLTATLPQDVQSRVFEPTPPHCRKVVL 676 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATNVAETS+T+ + YV+D G ++ + + +T +++L I PISQA A QR GR GR+ G Sbjct: 677 ATNVAETSITISNLSYVVDSGYSKQNVFDPKTGMEQLKIMPISQAQARQRAGRAGRIGPG 736 Query: 407 ICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 C R+Y+E F T P+I R+NL V+LQ+ A+G+ D+ A ++ P + + Sbjct: 737 KCFRMYTEIQFRQDMDPATVPDIQRSNLFHVVLQLKAMGINDLFALDLMDPPPQETLVTA 796 Query: 466 VRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 ++ L L A+ D LTPLG +++ LP+DP ++ +L A GC + I S L Sbjct: 797 LQKLRYLEALDEDGL-----LTPLGGRMAHLPIDPSHSKTLLTAVDLGCSEPVLTIVSML 851 Query: 526 SIQ--DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 + Q RP D+ +A+D R+FH E D + + +++ +++ C+ Sbjct: 852 AAQKRGVFYRPRDQHEAADAAKRQFHQPEGDHITLLAVYDAW------VANGLSENWCKR 905 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPV-NSEPAEYREIHIALLTGLLSHIGMKDADKQ 642 ++L + + E +D QL +++++ + + + E+ A+ G + + D Sbjct: 906 NFLKHRMLMEARDTRDQLSEMLRKRHTNIEHHNDSSLTEVRRAITAGYFFNAARRITDVA 965 Query: 643 EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 T A + P S L PPK+++ E+ TSR + R I+P W+ +A Sbjct: 966 YATLAERREVYVHPSSCLRDTPPKYLLYNEVQLTSREYMREILAIEPRWLVELAPAF--- 1022 Query: 703 TYSEPH 708 YS+P Sbjct: 1023 -YSKPR 1027 >UniRef50_A2D7A5 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2D7A5_TRIVA Length = 660 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 203/658 (30%), Positives = 352/658 (53%), Gaps = 21/658 (3%) Query: 48 QEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 ++ +K ++ + +LP+ + K+ I+E I ++ I+ GETG GK+ Sbjct: 16 RKRSKNKSGGHKDPQKKKEFNALYQFRKSLPIWKSKKQIIELIANNPTTILVGETGCGKS 75 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+P+ ++ + TQPRR++A ++A R+A E E G +GY VRF + S Sbjct: 76 TQVPQFLVDSFELKGCRVAVTQPRRVSATSLAARVAAERNCEVGSYVGYSVRFDNKSSPK 135 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 + +K +TDG+LL EI D L Y+ +I+DE HER++ D L+G L++L RR DLK+I+ Sbjct: 136 SYIKYVTDGMLLREILVDNDLSAYNVVILDEIHERTVQTDLLIGLLRDLQARRSDLKLIL 195 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ 287 SAT++ + F FN PII V GRT+ V ++Y D+ + D ++A AV +L++ Sbjct: 196 MSATLNCKLFVDFFNGPPIIHVEGRTFKVAIKY------TDEPQTDYIEATTTAVLQLNE 249 Query: 288 E-SHGDILIFMSGEREIRDTADALN-KLNLRHTEILPLYARLSNSEQNRVFQS--HSGRR 343 E GD L+F++G+ EI + + L + ++LPLYA L +Q VF R+ Sbjct: 250 ECDKGDFLVFLTGQEEIEEVMETLKTEETYPPLKVLPLYAALPMYQQQEVFNPVDEGTRK 309 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 ++L+TN+AETS+T+PGIKYVID G ++ Y+ + ++ L + P ++A QR GR GR Sbjct: 310 VILSTNIAETSVTIPGIKYVIDSGLVKVKTYNPVSGIEILGVTPCAKAQVVQRAGRAGRE 369 Query: 404 SEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 SEGI RL++ED F + EI R +L+SV+LQ+ ALG+ + F F+E P IQ Sbjct: 370 SEGIAFRLFTEDSFFDLKDQPVAEIRRADLSSVVLQLFALGVKNPMTFGFLERPPTEMIQ 429 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 ++ L LGA+T + L+ G+ ++ P++P++ +++L A + GC A+ + + Sbjct: 430 ASIQQLWSLGALTPQGE-----LSDDGKVMANFPMNPKMTKILLLACQSGCGGSALTLLA 484 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 +S ++ +P +K++ + H F + D + + L+ K + C Sbjct: 485 MMSCENLYVQPANKRKEARNAHSIFIHETGDHVTLIRLYEAFAATPKEKQ----KDFCFE 540 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE--IHIALLTGLLSHIGMKDADK 641 +++ ++ + +QL ++ ++ + V E R I A+ ++ + + Sbjct: 541 KFVSLRALQFAVSVRSQLLEIAEQQKLNVQDADEENRFLLIRQAISIACPENVATQISGG 600 Query: 642 QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 + SI P S F K K ++ +E V+T +L+ R + D +W + VA L Sbjct: 601 KYKCVLDGTEISIHPSSFAFNKGMKTIVFSERVQTKKLYARWVSASDEKWTDLVAPTL 658 >UniRef50_C4LWD6 Helicase, putative n=10 Tax=Eukaryota RepID=C4LWD6_ENTHI Length = 675 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 234/674 (34%), Positives = 361/674 (53%), Gaps = 41/674 (6%) Query: 50 MAKEIDQAAGKVLLREAARPEITYP------------DNLPVSQKKQDILEAIRDHQVVI 97 M ++I + ++ L E P P + LPV Q +++++ ++ ++V+I Sbjct: 1 MKRDIKHSKKRIDLEEIINPLNGKPYSENYFKLQEKINALPVKQYEKEVINELKKNRVLI 60 Query: 98 VAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYK 157 + G TGSGKTTQ+PK C+ + TQPRR+AA +VA R+AEE+ + G +GY Sbjct: 61 LEGATGSGKTTQIPKFCLNPEICGGKGVCCTQPRRVAAISVAQRVAEEMDVQLGEEVGYC 120 Query: 158 VRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL 217 VRF D SD T + MTDG+LL E+ D + +Y I++DEAHER+++ D L G LK LL Sbjct: 121 VRFDDCRSDKTKLTYMTDGMLLRELMGDPKIQKYGVILLDEAHERTVSTDILFGVLKSLL 180 Query: 218 PRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQA 277 R DLKI++ SAT++ +F +F+NAP + V GRTYPV + Y E D +A Sbjct: 181 EEREDLKIVVMSATLEATKFKEYFDNAPNMSVEGRTYPVTINYS------RYPENDYFEA 234 Query: 278 IFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR-HTEILPLYARLSNSEQNRVF 336 V ++ E GD+LIFM+GE EI + +N + + H LPLY+ L EQ RVF Sbjct: 235 AVKVVSKIDNEPEGDVLIFMTGEEEIEEMVARINSMKTKSHMIALPLYSALPQQEQQRVF 294 Query: 337 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 + +GR+++++TN+AETS+T+ GI YVID G + Y T+V+ L + ISQA+A QR Sbjct: 295 EKVNGRKVIVSTNIAETSVTIDGIVYVIDTGYVKQKVYLPSTRVETLQVTAISQAAAQQR 354 Query: 397 KGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 GR GR G C RLY+E F S P+ T PE+LRT+LASVIL M +G+ DI F +++ Sbjct: 355 AGRAGRTRPGQCYRLYTEKGFNESLPKQTVPEMLRTSLASVILHMKKIGIKDILHFDYLD 414 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 AP + + + L L A+ LT +G ++S++PVDP+LA ++ + + V Sbjct: 415 APSPQVMVRALEQLYYLNALDD-----KTNLTEIGSKISEIPVDPQLAVTLIASIDYNVV 469 Query: 516 REAMIITSALSIQDPRERPMDKQQ--ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 E I S L++ RP ++++ +D F+D ESD + +N +N E K Sbjct: 470 DEISTIVSLLNVPSIFYRPKEQEEKSKADAAKAYFNDHESDHITLLNTYNAWIENGKD-- 527 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY-----REIHIALLT 628 + +Y+N +++ + I QL ++ +G+ +P E I AL Sbjct: 528 ----SKWAWNNYVNQRALKQAESIKNQLLGILYRMGVKQQQKPIEDVRKRKELIRKALCK 583 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688 G N + P S + K+ +W++ E V T R + R A+ I Sbjct: 584 GFFMQSAH-QVKGGYQIVCDNRIVLLHPSSCIGKR--EWILYNEYVMTKREYVRTASSIQ 640 Query: 689 PEWVEPVAQHLIKR 702 PEW+ + + Sbjct: 641 PEWLFEASPKYFAQ 654 >UniRef50_A2DQS5 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2DQS5_TRIVA Length = 785 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 226/753 (30%), Positives = 368/753 (48%), Gaps = 72/753 (9%) Query: 2 TEQQKLTFTALQQRLD------------SLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQE 49 TE +K+ LQ+ D S+ LRD R L+ +++K+ + Sbjct: 41 TELEKIELDNLQKTADYVQKYNATDESLSVNLRDSTETGRTLN--ERLKSAGRLSVLQDA 98 Query: 50 MAKEIDQ-------AAGKVLLREAARPEI-----------------TYPDNLPVSQKKQD 85 A I + + + +P I +LPV + K+ Sbjct: 99 YATNIKKETTWENEKIESAYMDKTQKPTIFTLPPREDLIVKEIDYTEVQQSLPVFKYKKT 158 Query: 86 ILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEE 145 +L+A+ + V++V G+TGSGK+TQ+P+ +E R + TQPRR+AA +VA R+AEE Sbjct: 159 LLDALVSNHVLVVVGDTGSGKSTQIPQYLLE--RSPNESVVCTQPRRVAAMSVAARVAEE 216 Query: 146 LKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLN 205 E G +GY VRF D S+ T ++ MTDG LL E D LL +Y T++IDEAHERS++ Sbjct: 217 RHVELGFEVGYAVRFDDKTSEFTKIRYMTDGTLLREFLVDPLLSKYTTVMIDEAHERSIS 276 Query: 206 IDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 D LL LK+L+ RP+ ++++ SAT+D S ++ PI+ V GR + V++ Y Sbjct: 277 TDILLSLLKDLMQVRPEFRLVVASATLDAASMSDFYDKCPILTVPGRRFTVDINY----- 331 Query: 266 EADDTERDQLQAIFDAVDELSQ----ESHGDILIFMSGEREIRDTADALNKL----NLRH 317 + D A D V ++ E DIL+F++G+ EI + +N+L + + Sbjct: 332 -TNTPVVDYEIAAIDTVVKIHTSTEIEQPCDILVFLTGQDEIDRSVAKINELISSKVINN 390 Query: 318 TEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 E LPLY+ L + Q+ +F+ R+++ +TN+AETSLT+ +KYVID G + Y Sbjct: 391 IEALPLYSALPSERQSLIFKPAPRGTRKVIFSTNIAETSLTIDTVKYVIDCGLVKEMSYD 450 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLA 434 + L PIS++SA+QR GR GR S GIC RLY+E F + T PEI R + A Sbjct: 451 SKNGCSSLDRVPISKSSADQRAGRAGRTSHGICYRLYTESSFEFEHEQMTKPEIKRCDFA 510 Query: 435 SVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLS 494 +L + ++G+ DI F FV++P NI L L A+ D LT LG Q+S Sbjct: 511 PTLLLLISMGITDIVNFNFVDSPATNNIISAYEQLGALQALDNDGN-----LTELGEQMS 565 Query: 495 QLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP-RERPMDKQQASDEKHRRFHDKES 553 QLPV P AR +L++ + GC + I S L P ++ + + ++F+D+E Sbjct: 566 QLPVSPMCARAILKSFELGCSESVITICSVLESGSPLFYFSQNESKDAIAHIKQFYDEEG 625 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613 D + +N++N + + ++ C + + + + ++I QL + + L + Sbjct: 626 DHIMCLNVYNQW------VDAEYSQQWCIGNKVQHRTLLNAKNIKNQLSDICQILNFVED 679 Query: 614 SEPAE--YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP-KWVMV 670 I A G + ++ T I P S L + ++++ Sbjct: 680 ESKKNETSENISHAFCMGFFLNCAQLMSNGYYQTLRGQGEVKIHPSSCLLQYTAQQYLIF 739 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 EL +T+ ++ R R PEW+ +A ++ Sbjct: 740 YELSKTTDIFMRTLMRTKPEWLREIAPRYFEKN 772 >UniRef50_A5E397 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E397_LODEL Length = 1015 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 212/604 (35%), Positives = 342/604 (56%), Gaps = 28/604 (4%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 K + P+ + ++ + K L++++ + +LP+ + K+D++ IRD+Q Sbjct: 387 KKEKPEQEDEQLKQYMASFKKNKPKKLIKQSRKSIQELRKSLPIYKMKRDLINQIRDNQF 446 Query: 96 VIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 +++ GETGSGKTTQ+ + E+G +IG TQPRR+AA +VA R+AEE+ GG +G Sbjct: 447 LVIVGETGSGKTTQIVQYIYEVGLNQSKIIGCTQPRRVAATSVARRVAEEMDVHLGGLVG 506 Query: 156 YKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKE 215 Y VRF D S NT +K +TDG+LL E D L +Y I++DEAHER++ D L G LK+ Sbjct: 507 YNVRFDDKTSTNTKIKYLTDGMLLREALTDPSLSKYSVIMLDEAHERTIATDVLFGLLKK 566 Query: 216 LLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQL 275 P+LK+I+TSAT+D +FS+ FN+ P+I + GRT+PV++ Y + E D L Sbjct: 567 AAKANPNLKVIVTSATLDSNKFSKFFNSCPVINIPGRTFPVDIVY------TNKPEMDYL 620 Query: 276 QAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLS 328 A D+V ++ E GDIL+F++G+ EI ++ L + N ILP Y+ L Sbjct: 621 AAAIDSVCQIHISEPAGDILVFLTGQEEIEVASEILQERMKMLQPNDPLMIILPCYSSLP 680 Query: 329 NSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 + EQ R+F+ R++VLATN+AETSLT+ GIKYV+D G +++ + L I Sbjct: 681 SDEQLRIFEETPAGMRKVVLATNIAETSLTIDGIKYVVDSGYCKLNLQDVTLGLDMLKIC 740 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446 PISQA A+QR GR GR G C RLY+E + + PEI R NLAS +L + A+ Sbjct: 741 PISQAQASQRSGRAGRTGPGKCYRLYTESIYSKLAPSSTPEIRRRNLASSVLMLKAMH-- 798 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 ++ F +++ P + + + L++L A+ ++T LG LS++P +P LA+ + Sbjct: 799 -LSTFEWMDPPSMQAVNAAYKQLKQLKALDE-----KLEITKLGVDLSKIPTEPSLAKCI 852 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 L +++ GC E + I + LSIQ+ RP +++ +D+ R+ SD + + ++ Sbjct: 853 LLSEEMGCTMEMLAIVAMLSIQNVFHRPKAQRKLADQVIARWTHSISDHITLLRVYTEFV 912 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIAL 626 + + A + C+ +++ + +R+ Q I QLR + + + S+ E R I L Sbjct: 913 KVESARKLD----WCKRNFVQHSSLRKAQQIVEQLRSICRFNNRDLQSKQKE-RIILNCL 967 Query: 627 LTGL 630 GL Sbjct: 968 TNGL 971 >UniRef50_B6H7B9 Pc16g02360 protein n=34 Tax=Leotiomyceta RepID=B6H7B9_PENCW Length = 672 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 225/684 (32%), Positives = 355/684 (51%), Gaps = 56/684 (8%) Query: 58 AGKVLLREAARPEITYPDNL-PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 A + L + P + P L P+++ K+++L + + V IV G+TGSGKTTQLP+ + Sbjct: 2 ASEQELSTSFIPALYKPAALLPIARHKKNLLYLVEKYPVTIVVGQTGSGKTTQLPQYLDQ 61 Query: 117 LGRGIKGLIG-HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 G G I TQPRR+AA TVA R+AEE++ + G +GY +RF D S T +K +TD Sbjct: 62 AGWCEDGKIIAVTQPRRVAATTVATRVAEEMRCKVGEEVGYSIRFEDLTSPATRIKFLTD 121 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 G+LL E D LL +Y I++DEAHERSL D LLG LK++ +RP+L+II++SAT+ E Sbjct: 122 GMLLREALVDPLLSRYSVIMVDEAHERSLGTDVLLGTLKKIRKKRPELRIIVSSATLQAE 181 Query: 236 RFSRHFNNA----------------PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIF 279 F R F II + GR YPV++ + D D ++ Sbjct: 182 DFLRFFAGEEYQPEAEPEDLGGSVGRIISLEGRMYPVDILFL------DSPAEDYIERAV 235 Query: 280 DAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQ 332 V ++ QE GD+L+F++G EI +++ LPLYA L+ +Q Sbjct: 236 KTVFDIHTQEPEGDVLLFLTGREEIDTAIQLISERAATLHPKAPSLLPLPLYAGLTTEQQ 295 Query: 333 NRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 VF+ R+++++TN+AE S+T+ GI YVID G A++ Y+ T + L PIS+ Sbjct: 296 MYVFEPTPENTRKVIVSTNIAEASVTIDGIVYVIDSGFAKLRAYNPNTGIDTLTAVPISK 355 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA 450 ASA QR GR GR G C RLY++ F PE PEI R+NLA VI+Q+ ALG+ +I Sbjct: 356 ASATQRAGRAGRTKPGKCFRLYTQQAFEQMPEARVPEIQRSNLAPVIMQLKALGIDNIVR 415 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEA 509 F F+ P I + LL LGA+ KLT PLG +++++ +DP +A+++L A Sbjct: 416 FDFLTPPPAELIIRALELLSSLGAVDD-----YAKLTKPLGMRMAEIALDPMMAKVLLVA 470 Query: 510 QKHGCVREAMIITSALSIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 C+ E + I + +++Q + +++++ R+F +E D L ++N++ + Sbjct: 471 PSFNCLSEILTIAAMVNLQGTVWVQHAGDKRSAESHRRKFAVEEGDHLTYLNVYQAFVTK 530 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE----------PAE 618 K S + CR + LNY + I QL++ ++ GI V+ + Sbjct: 531 GKKDS-----KWCRDNLLNYRALLRAVSIRGQLKRYLERFGIQVDETLSSRHGAADLSKQ 585 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET-S 677 +I L TG +H D T + P S +F + WV+ E+++T Sbjct: 586 PEQIRRCLTTGYFAHAAKMQPDGTFKTVSGGLTLHAHPTSLMFNRKADWVIFHEIMQTGE 645 Query: 678 RLWGRIAARIDPEWVEPVAQHLIK 701 + + R +I+ ++ A + Sbjct: 646 KTYIRDVTKIEKSYLLEYAPDYYR 669 >UniRef50_Q55EC3 DEAD/DEAH box helicase n=1 Tax=Dictyostelium discoideum RepID=Q55EC3_DICDI Length = 716 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 210/682 (30%), Positives = 347/682 (50%), Gaps = 78/682 (11%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLA 134 +LP+ Q ++ IL + + +++ G TG GK+TQ+P+ E G I TQPRR+A Sbjct: 54 SLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCTQPRRVA 113 Query: 135 ARTVANRIAEELKTE-PGGCIGYKVRFSDHVSD-NTMVKLMTDGILLAEIQQDRLLMQYD 192 A ++A R+A+E+ + G +GY VRF + +SD T +K +TDG+L+ E+ D LL++Y Sbjct: 114 AISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPLLLKYS 173 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPD----------LKIIITSATIDPERFSRHF- 241 I+IDEAHERSL D L+G LK++ +R LK+II+SAT++ F F Sbjct: 174 VIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFFN 233 Query: 242 ---------NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGD 292 + + I+ + GRTYPV++ Y + E + + +Q I +D + + GD Sbjct: 234 YNQTNDKSKDTSTILSIEGRTYPVDIHY--LEESTSNYIQTTIQTI---IDIHTTQPPGD 288 Query: 293 ILIFMSGEREIRDTADALNK-----------------LNLRHTEILPLYARLSNSEQNRV 335 IL+F++G+ EI L+ +LP+Y+ LS ++Q +V Sbjct: 289 ILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKV 348 Query: 336 FQSHSG----RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 F+S R+I+++TN+AETS+T+ G+ YV+D G +I Y + ++ L I P S++ Sbjct: 349 FESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKS 408 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAA 450 SANQR GR GR G C RLY+E + P+ T PEI R+NL + ILQ+ ALG+ +I Sbjct: 409 SANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILN 468 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEA 509 F F+ P ++ G+ +L LGA+ + KLT P G +++ P DP ++M++++ Sbjct: 469 FDFISQPPSSSLIRGLEVLYGLGALDDNG-----KLTNPTGMIMAEFPTDPTFSKMIIQS 523 Query: 510 QK--HGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGE 567 C E + IT+ L+IQ + + + KE D L +N++N Sbjct: 524 SSNGFNCSDECITITAMLNIQGLFTN------QNHKSRKHLLVKEGDHLTLLNIFNSF-- 575 Query: 568 QQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE------ 621 +S+ + + C +NY ++ + QL K+ I V S Sbjct: 576 ----ISNQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCFDSNNNREQCSN 631 Query: 622 -IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL-FKKPPKWVMVAELVETSRL 679 I A+++G ++ D T + + P S L P+WV+ E+ T++ Sbjct: 632 LIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQWVIFNEVTITTKE 691 Query: 680 WGRIAARIDPEWVEPVAQHLIK 701 + + I+P W+ +A H K Sbjct: 692 YMKDVTSIEPNWLFEIAPHYYK 713 >UniRef50_B0ECZ2 ATP-dependent RNA helicase, putative n=2 Tax=Entamoeba RepID=B0ECZ2_ENTDI Length = 664 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 205/674 (30%), Positives = 338/674 (50%), Gaps = 49/674 (7%) Query: 58 AGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 ++L + + + LP+ Q K DI+ ++ HQ ++V GETG GKTTQLP+ +E Sbjct: 7 NKPIILSKERVALLRQREQLPIRQSKDDIISELKKHQTMVVVGETGCGKTTQLPQFILES 66 Query: 118 GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 IG TQPRR+AA T+A R+++E+ G +GY+VRF + +S +T ++ +TDG+ Sbjct: 67 NICEGKKIGVTQPRRVAAITLAERVSKEVGCRVGTTVGYRVRFEEKMSKDTKIEYLTDGM 126 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LL D L Y I++DEAHER+++ D L+G L+ +L RR DLK+++ SAT+D + F Sbjct: 127 LLRTALLDPDLKSYGVIVLDEAHERTVHTDILIGLLRGILRRRKDLKVVVMSATLDSQLF 186 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIF 296 S F P + ++GR +P+E+ + ++E + A A+ +L GDIL+F Sbjct: 187 SNFFAG-PTLTIAGRQHPIELFHLT------ESEDSPVDASITAILQLHMSAGPGDILVF 239 Query: 297 MSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLAT 348 + G+ I AL + ++ ++LPLYA L +Q +F R+IVL+T Sbjct: 240 LPGQDAIESVEAALLERMKNAPATVKPIQVLPLYAALPPEQQLLIFSPPPPDTRKIVLST 299 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETS+T+PG+++VID G + Y + ++ L +S+A A QR GR GR + G C Sbjct: 300 NIAETSVTIPGMRFVIDTGLVKEKEYQSKIGMEALKTTWVSKAQAMQRAGRAGREAPGQC 359 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RLY+ F T PEI R +L V+LQ+ AL + D+ F F++ P +I Sbjct: 360 YRLYTSKRFSEFSATTTPEIQRCSLDGVVLQLKALNVIDVTQFDFLQPPSGDSISRAEIN 419 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L +LGA+ ++TPLG+ + LPV P AR ++ A + C+ + I + L++ Sbjct: 420 LSKLGALEN------GRITPLGKVMVALPVAPPFARTIIAAAQSNCLAHILCIVAMLAVD 473 Query: 529 DPRERPM-DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 ++ + + R + D ++L+ K + N +R C + LN Sbjct: 474 TQFFVSAPSIREKAQQSMRMYSSDNGDHFMLLSLYLAF----KKVGVNRRKRWCVENALN 529 Query: 588 YLRVREWQDIYTQLRQVV-------------------KELGIPVNSEPAEY--REIHIAL 626 Y + + QL Q + + +N E + I A Sbjct: 530 YKALNTALSTHDQLVQYCVGILDKELKGSTAKEQCTEENMKRIINEAIPETIIKSIKKAF 589 Query: 627 LTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAAR 686 L G ++ ++ D Y I P S + K K+V+ AELV T++ + R Sbjct: 590 LVGFPDNVAIRQPDNT-YLTTTQKIVHIHPSSCVHNKKQKYVLFAELVYTTKPFIRSVLS 648 Query: 687 IDPEWVEPVAQHLI 700 ++ E ++ +LI Sbjct: 649 LESELIQEEMPNLI 662 >UniRef50_P20095 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 n=11 Tax=Saccharomycetaceae RepID=PRP2_YEAST Length = 876 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 224/701 (31%), Positives = 365/701 (52%), Gaps = 67/701 (9%) Query: 40 PDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA 99 P+ + +A+ ++ ++L + AR LPV Q K ++L+ I+ +QV+I+ Sbjct: 192 PEEKLQYEARLAQALETEEKRILTIQEARKL------LPVHQYKDELLQEIKKNQVLIIM 245 Query: 100 GETGSGKTTQLPKICMELGRGIKGL--IGHTQPRRLAARTVANRIAEELKTEPGGCIGYK 157 GETGSGKTTQLP+ +E G +G I TQPRR+AA +VA R+A+E+ G +GY+ Sbjct: 246 GETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQ 305 Query: 158 VRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 +RF D + N T++K MTDG+LL E D L +Y I+IDEAHER+L D L+G LK++ Sbjct: 306 IRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDI 365 Query: 217 LPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ 276 LP+RP LK++I+SAT++ ++FS F+N PI V GR YPV++ Y E + + Sbjct: 366 LPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHY------TLQPEANYIH 419 Query: 277 AIFDAVDELSQES--HGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLS 328 A + ++ GDIL+F++G+ EI T L ++ + I P+YA L Sbjct: 420 AAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLP 479 Query: 329 NSEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 +Q ++FQ R++VLATN+AETSLT+ GI+YVIDPG + + Y T + +L Sbjct: 480 QEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTV 539 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD-PEILRTNLASVILQMTALGL 445 P S+AS +QR GR GRV G C R++++ +L E PEI RTNL++ +L + +LG+ Sbjct: 540 PCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGV 599 Query: 446 GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARM 505 D+ FP ++ P ++ + L LGA+ S +T LG+ + + P +P A++ Sbjct: 600 TDLIKFPLMDKPSIPTLRKSLENLYILGALN-----SKGTITRLGKMMCEFPCEPEFAKV 654 Query: 506 VLEAQKH----GCVREAMIITSAL-SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 + A H G + E + I S L Q D + ESD + ++ Sbjct: 655 LYTAATHEQCQGVLEECLTIVSMLHETPSLF-----IGQKRDAAASVLSEVESDHILYLE 709 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 ++N +S R C+ + + + ++I QL + +++G+ ++ A + Sbjct: 710 IFNQWR------NSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMK 763 Query: 621 ----------EIHIALLTGLLSHIGMKDADKQEYTG--ARNARFSIFPGSGLF------- 661 I ++G +I + G + S+ P S LF Sbjct: 764 IGNIAGYINARITRCFISGFPMNIVQLGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKA 823 Query: 662 KKPPKWVMVAELVETSRLWGRIAARI-DPEWVEPVAQHLIK 701 ++P K+V+ +L+ TS+ + R I EW+ + + K Sbjct: 824 QRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFK 864 >UniRef50_C3YFD5 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YFD5_BRAFL Length = 666 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 217/691 (31%), Positives = 355/691 (51%), Gaps = 74/691 (10%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY-PDNLPVSQKKQDILEAIRDHQVV 96 K + +E + + + V+ + A I LPV + + IL + +Q V Sbjct: 10 KPGTEAPGVHEERQQVSEGSGEAVVHNQNASLSIQQQRQRLPVFKYRNQILYLVERYQTV 69 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 ++ GETG GK+TQ+P+ +E G G +G +IG TQPRR+A TVANR+AEE G +G Sbjct: 70 VIVGETGCGKSTQIPQYLLEAGWGAEGHVIGVTQPRRVACTTVANRVAEERGAVLGHEVG 129 Query: 156 YKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 Y +RF + T +K +TDG+L+ E+ D LL +Y +++DEAHER+L+ D ++G LK Sbjct: 130 YSIRFDNRFDPEATRIKFLTDGMLVREMMADPLLKKYSILMLDEAHERTLHTDIIIGLLK 189 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFN----------NAPIIEVSGRTYPVEVRYRPIV 264 ++ +R DL+II++SAT+D + F FN A I+ + GR +PV V YR Sbjct: 190 KIQKKREDLRIIVSSATLDAKAFRDFFNKNVSDLESFDTAHILSIEGRAFPVNVYYR--- 246 Query: 265 EEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADAL---NKLNLRHTE- 319 + D +A D + ++ + E GDIL F++G+ E+ L N+ N RH + Sbjct: 247 ---ESPVPDYAKATVDTIVKIHEGEKAGDILAFLTGQEEVDSVVSDLIEYNRTNRRHVDG 303 Query: 320 -----ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 +LP+YA L EQ +VF+ S S R+IV+ATN+AE S+T+ GI YV+D G ++ Sbjct: 304 RMKMKVLPMYAALPPGEQLKVFERVSQSTRKIVVATNIAEASITINGIVYVVDSGFVKLR 363 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 Y+ ++ V +E+DF T PE+ R+N Sbjct: 364 AYNPQSGV--------------------------------AEEDFHKLQTNTVPEMQRSN 391 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 A VILQ+ ALG+ +I F F+ +P + + G+ +L LGA+ D + + PLG Sbjct: 392 FAFVILQLKALGISNILRFNFLSSPPAQIVIRGLEVLYALGALDKDGELTR----PLGSN 447 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 +++ P+ P A+M+LE+ K GC E + I + L +Q P +++ + H +F +E Sbjct: 448 MAEFPLSPMFAKMLLESGKFGCSEEILTIAAVLQVQSIFVHPSNRKIEALRAHHKFAVEE 507 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 D + +N++ L +N R C+ +L+Y + I QLR+++ + +P+ Sbjct: 508 GDLVTMLNVYEAF------LKNNKSSRWCQQHFLHYKGLVRATMIREQLRKLLVKFDVPM 561 Query: 613 NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK-KPPKWVMVA 671 NS + I ++ G ++ T + I P S L++ KPP WV+ Sbjct: 562 NSSEGDVDPICQCIVAGFFANAARFHPTGVYRTVRDDHELHIHPNSCLYREKPPGWVVFN 621 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 E++ TS+ + R IDP W+ +A H + Sbjct: 622 EVLHTSKQFMRDVTVIDPSWLYELAPHYYEY 652 >UniRef50_UPI0001792F5D PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 33 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792F5D Length = 653 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 207/650 (31%), Positives = 342/650 (52%), Gaps = 37/650 (5%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 +LPV+ +K + I+ ++ +I+ GETGSGKTTQ+P+I E + TQPRR+ Sbjct: 11 RKSLPVTLQKDKLCSLIQKNETLIIIGETGSGKTTQIPQIVYENILRPDEDVVVTQPRRV 70 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA ++A R++ E+ TE G +GY+VRF D + T +K MTDG+LL ++ L Y Sbjct: 71 AAISLAERVSYEVNTEIGDLVGYRVRFIDKTNHFTKIKFMTDGMLLRTAILEKSLSAYGC 130 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRP----DLKIIITSATIDPERFSRHFNNAPIIEV 249 +I+DEAHER++N D L G +K++ R LK+I+ SAT++ + F+ +F NA I+ + Sbjct: 131 VILDEAHERTVNTDLLFGIVKKVQRSRKHSSNPLKVIVMSATMNADLFADYFGNAQIVYL 190 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGEREIRDTA 307 GR + +++ + A D F + +L +E+ D L+F++G+ EI + A Sbjct: 191 QGRLHDIKIFH------AKKNVEDYFHDTFVTIFQLHKEAPERHDFLVFLTGQEEIENMA 244 Query: 308 DALNK-------LNLRHTEILPLYARLSNSEQNRVF----QSHSGRRIVLATNVAETSLT 356 A+ N ++ LYA L +EQ +VF + R+I+L+TN+AETS+T Sbjct: 245 LAIEHINQDPSLRNYPVIKVRTLYASLPTNEQLKVFMSLEPNEFARKIILSTNIAETSVT 304 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + GIKYVID G ++ + T + L +E ISQA A QR GR GR S+G C R+YS+ Sbjct: 305 LTGIKYVIDCGKVKVRCFHPETSMDALKVENISQAQAEQRAGRAGRESDGYCYRIYSKKQ 364 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 + + PEILR NL +V+LQ+ A+ + D F F+ P I +L LGA Sbjct: 365 YDEMTKDPVPEILRCNLGNVVLQILAMNM-DPHKFDFINKPSTDAIDQAYNMLGNLGA-- 421 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 LT LG ++++ P+DPR ++++L + +GC+ + + I S LS + Sbjct: 422 ----TKNSILTELGHKMTKFPLDPRYSKIILSSVNYGCMEDIVNIVSILSTDSIFVSSLS 477 Query: 537 --KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 K++ +++ H +F SD + + + + +K S+ C ++LN + Sbjct: 478 EKKKKQAEDAHTKFKSSVSDHIMLLKTFRSYRKVRKDSKSS----WCDDNFLNVRNLEYA 533 Query: 595 QDIYTQLRQVVKELGIPV-NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 QL + + L +P+ S + + LLTG ++ + DK+ T Sbjct: 534 DRAREQLLDICRYLHLPIGQSCGDNFDPLRKCLLTGFFENLAYINQDKKYVTVNAKKECK 593 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 I P S LF P V+ E++ETS+ + + ID EW+ + ++ +R Sbjct: 594 IHPTSTLFHSYPHCVLYTEIIETSQPYMKYITVIDKEWLVDIVPNVHQRH 643 >UniRef50_A4RXZ6 Predicted protein n=7 Tax=Eukaryota RepID=A4RXZ6_OSTLU Length = 713 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 217/706 (30%), Positives = 354/706 (50%), Gaps = 66/706 (9%) Query: 49 EMAKEIDQAAGKVLLREAARPEITYPDN-LPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 ++ + D + + + ++ LP++ +++ + HQ ++ G TG GKT Sbjct: 24 DVDADADATGTLIQFEKNPKASLSARRRALPIAAHADELMYCVEKHQTTVIVGHTGCGKT 83 Query: 108 TQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSD-HVS 165 TQ+P+ + G G + TQPRR+AA+TVA R+AEE+ G +GY +RF D Sbjct: 84 TQIPQYLRDGGWCGGGATVAVTQPRRVAAQTVAQRVAEEVGCVIGDTVGYAIRFEDVCTP 143 Query: 166 DNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKI 225 T +K TDG LL E+ +D LL +Y +I+DEAHER+L D LLG LK++ R DL++ Sbjct: 144 GKTEIKFCTDGALLRELAEDPLLTKYSVVIVDEAHERTLATDVLLGLLKKVQRARRDLRL 203 Query: 226 IITSATIDPERFSRHFNNA------------PII-EVSGRTYPVEVRYRPIVEEADDTER 272 I++SATI E F+ F+ + PII V GR + V + Y D+ Sbjct: 204 IVSSATIQAESFAAFFDASGEDDDGDGPSRKPIIMSVEGRAHGVLIHYL------DEPTG 257 Query: 273 DQ-LQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK------------LNLRHTE 319 D L A+ A++ E GDILIF++GE EI D + L + + Sbjct: 258 DYVLSAVETALEVHRNEGPGDILIFLTGEGEIDDAVNLLEEEAREMKRDPRRSHDALDLV 317 Query: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 + PLYA L+ + Q F+ R++V+ATNVAETS+T+ G+ YVID A+ + Sbjct: 318 VCPLYAGLNPAAQLEAFRPPRRGARKVVVATNVAETSVTIEGVVYVIDSCFAKQKAFDPE 377 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 ++ L + P S+AS NQR GR GRV G C RL +E D+ S + T PEI+R++LAS + Sbjct: 378 RGMESLFVAPASKASTNQRAGRAGRVRPGKCFRLCTEIDYRSLADVTAPEIVRSDLASTV 437 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 LQ+ A+G+ +I F +V P N+ + LL L A+ D + + +PLG L+++P Sbjct: 438 LQIKAMGIDNIMNFEWVSPPPAANMIKALELLYALRALDDDAKLT----SPLGVHLAEIP 493 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 ++P+L +M+L + + GCVREA+ + + + +Q +++ DE RF +E D + Sbjct: 494 LEPQLGKMLLVSGEMGCVREALTVAAYMQVQSLWVTHRGQKKRLDEMRDRFAVEEGDAVM 553 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN-SEP 616 +N+ + + + + + LN+ + D+ +QL++ + LG+ N S Sbjct: 554 MLNIHDAYCDARNQA------KFASNNMLNHRALLRAGDVRSQLKKHLARLGVVTNSSCG 607 Query: 617 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS---------------IFPGSGLF 661 + I A+ G ++ G + F I P S LF Sbjct: 608 DDTVPIRRAIAAGFFANAATLAPYGG---GPDGSVFHSLRAMSARARARELRIHPSSALF 664 Query: 662 KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 + P+ V V T R + R ++ +W+ +A H + + P Sbjct: 665 RSRPQCVAYCSAVRTDREYMRDVTVVEADWLRELAPHFYRAVSANP 710 >UniRef50_D2UEZ1 Putative atp-dependent helicase protein n=1 Tax=Xanthomonas albilineans RepID=D2UEZ1_XANAL Length = 1375 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 225/684 (32%), Positives = 367/684 (53%), Gaps = 10/684 (1%) Query: 616 PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVE 675 A Y+ +H ALL GL + +G + +K ++ R RF +FPGS L +KPP WV+ A L++ Sbjct: 700 AAAYQSLHRALLAGLPTQVGHRT-EKGDFLAPRQRRFLLFPGSTLARKPPPWVLPATLLD 758 Query: 676 TSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKV 735 T ++WG A I+P+WV HL+ R + +PHW RAQG V+A+E+++++GL + + V Sbjct: 759 TQKIWGLTNAAIEPDWVIAEVPHLLARKHFDPHWSRAQGQVLASEQISLFGLVLAPKKPV 818 Query: 736 NYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETL 795 +Y +IDP+ +LF+R ALV G+ TR +F +N K+ A+ E E K RR I+ D++ Sbjct: 819 HYGRIDPSAAHDLFVRQALVPGEINTRASFVVDNQKVLAQAHEEEAKLRRAGIVADEDWQ 878 Query: 796 FEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQG 855 +Y RI ++ S D+WW +S E L++ L+ E + YP ++ G Sbjct: 879 ARWYLDRIPAEIHSTAGLDAWWNALSPEQRRALHWSLVDLLP--GEGSAADRYPKYFALG 936 Query: 856 NLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVR 915 + +L L Y+FEPGA DGVT+ +P+ LLN ++ + W PG + ALI+SLPK +R Sbjct: 937 DARLALHYRFEPGAADDGVTLEVPVHLLNALDPARLSWLAPGFVADKAAALIRSLPKALR 996 Query: 916 RNFVPAPNYAEAFLGR-VKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFR 974 RN+VPAP++A AF +P L L R L+R TGV + D+ + HL++ R Sbjct: 997 RNYVPAPDFARAFYEAFAQPSADDLRGELARFLQRATGVPLSPLDFDESALEPHLRMHLR 1056 Query: 975 VVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRG 1034 + D+ K L E R L++L+ + +A A + +GL + +P + G Sbjct: 1057 LRDETGKVLAESRDLEELRARFGDRAGRAFAARAGREMAATGLREFPLTPIPLHVPGEAG 1116 Query: 1035 NYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAK 1094 V A+PALVDE DSVA+++F + + + G+RRLL + + +K ++LP K Sbjct: 1117 ---VPAYPALVDEGDSVALRIFADRAQAETEHPRGVRRLLEIALTDKLKQARKQLPVSPK 1173 Query: 1095 LGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAK 1154 L + L D + ++ L++ + + FA + V +L ++ K Sbjct: 1174 TSLLYAAIESQERLRGDLVDATLNALLEQGLDTIRDADSFAQRRDTVAKQLFGEAMERLK 1233 Query: 1155 QVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQ 1214 E I++A + +L+ + + L D++ Q+ L+ GF+ L RYL+ Sbjct: 1234 LAEAIMSAAAELKPQLESPLMGWASGNLDDMRTQLAALMPPGFLRETPAHALAQFPRYLR 1293 Query: 1215 AIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVS 1274 A+ R E+ DP RD+A+ML+++ + RR+D + +RW +EELRVS Sbjct: 1294 AMLLRAERAKRDPARDQARMLELKPFVDVLTEAA---VAGRRDDPQWQALRWDLEELRVS 1350 Query: 1275 YFAQQLGTPYPISDKRILQAMEQI 1298 FAQ+LG IS K++ Q + + Sbjct: 1351 VFAQELGAKSGISAKKLAQRVAAL 1374 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 332/656 (50%), Positives = 446/656 (67%), Gaps = 20/656 (3%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPD 75 +D + RDR R + A ++ F++ +D + + R AA+P I Sbjct: 20 IDGALTRDRGRLLGLWSRWQAAPGNAALESAFEQ---ALDASRTRCAARAAAQPAIVLDP 76 Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LP++++ + I+ IR HQVV++AGETGSGKTTQLPK+C+ GRG G+IG TQPRR+AA Sbjct: 77 QLPIAREAERIVALIRAHQVVVIAGETGSGKTTQLPKLCLIAGRGAAGMIGCTQPRRIAA 136 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 R VA R+AEEL+T G +G++VRF+D V + T+VK MTDGILLAEI DR L YDTII Sbjct: 137 RAVAARVAEELRTPVGETVGFQVRFNDRVGEQTLVKFMTDGILLAEIASDRWLSSYDTII 196 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHERSLNIDFLLGYLK+LL +RP+LK+I+TSATID RF+ HF +AP+I V GRTYP Sbjct: 197 VDEAHERSLNIDFLLGYLKQLLRKRPELKVIVTSATIDTARFAAHFEDAPVIGVEGRTYP 256 Query: 256 VEVRYRPIVEEADDT--------ERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDT 306 VEVRYRP+ +E+ DT ER +AI AVDE+++ + GD+L+F+ GEREIRD Sbjct: 257 VEVRYRPLQDESGDTDASGDSAGERTVNEAILAAVDEITRLDPRGDVLLFLPGEREIRDA 316 Query: 307 ADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDP 366 AL + R TE+LPLYARLS S+Q+RVF RR+VLATNVAETSLTVP I+YV+DP Sbjct: 317 HQALERRKYRETEVLPLYARLSASDQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDP 376 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDP 426 G AR+ RYS R K+ RL IEPISQASANQRKGRCGR++EGIC RLY+E DF +RP FTDP Sbjct: 377 GYARVKRYSPRQKLDRLHIEPISQASANQRKGRCGRIAEGICYRLYAEADFQARPMFTDP 436 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI R++LA VIL+M LGLG + FPF+E PD+R + DG + L ELGA+ ++ KL Sbjct: 437 EIRRSSLAGVILRMLQLGLGRMEDFPFLEPPDERAVADGWQQLVELGAVGEPDRHGVRKL 496 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T +GR++++LPVD +LARM++ AQ+H C+R ++I + L IQDPRERP + ++A+D H Sbjct: 497 TEIGRKMARLPVDVKLARMLVAAQQHACLRPMLVIAAFLGIQDPRERPPEAREAADNAHA 556 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK 606 +F D S+F+ + LW+ + + L+ + R C +L +LR+REW++++ QL + Sbjct: 557 KFADARSEFVGILRLWDGYRQAHEELTQSKLRDWCARHFLGFLRMREWRELHRQLHLLCA 616 Query: 607 ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662 ELG E ALL LL+ + T AR R + + L + Sbjct: 617 ELGWS--------EEPASALLQPLLTAAAAPAPARDAETAARMTRGQLHRAARLAR 664 >UniRef50_C9ZMN0 ATP-dependent RNA helicase, putative n=4 Tax=Trypanosoma RepID=C9ZMN0_TRYBG Length = 742 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 219/654 (33%), Positives = 348/654 (53%), Gaps = 48/654 (7%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 + LPV Q+ +++ + +RDHQVV+ GETGSGKTTQ+P+ E+ + G++ TQP Sbjct: 77 LAQRTTLPVYQRAKELTQNMRDHQVVLFVGETGSGKTTQVPQFISEM--ELPGVVVCTQP 134 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AA ++A R+A E+ + G +GY+VRF VSD T + MTDG+LL E DR L + Sbjct: 135 RRIAAMSIAVRVAAEMDVQLGEEVGYRVRFKSMVSDKTKLLYMTDGMLLREAFSDRDLSR 194 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 +++DEAHER++ D LLG L+ L+ RR D ++++ SAT+D ERF +F AP+I+V Sbjct: 195 ISVVVVDEAHERTVETDVLLGVLRLLMQRRQDFRLVVMSATLDMERFQAYFPKAPLIQVE 254 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTAD- 308 GR Y V+V Y + +D ++A + V ++ E GDIL F++GE EI Sbjct: 255 GRMYDVQVLYSTV------PVKDYVEACVERVCDIHLNEPPGDILCFLTGEAEIERAVSR 308 Query: 309 ---ALNKLNLRH------------TEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVA 351 L L +LPLY L +Q RVF + R+I+ ATN+A Sbjct: 309 TKLKLEHLLADDGNTVSSNGAQLLARVLPLYGSLGVDDQGRVFSNAGKNTRKIIFATNIA 368 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLT+ GI YV+D G + S Y+ +V L IS+ASA QRKGR GR G C RL Sbjct: 369 ETSLTIDGIVYVVDCGYHKQSLYNAEARVDYLLPAVISKASAEQRKGRAGRTRPGKCFRL 428 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 + + DF S P T PE+LR+N+ + +L + L + + F F++ P ++++ D L Sbjct: 429 FQQSDFSSFPNQTHPEVLRSNMINTVLLLLKLDVTNPYQFAFIDPPSQQSVMDAYCQLSL 488 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 GA+ D +LT GR ++ PVD LAR+++ + ++GC +A +I + L ++ Sbjct: 489 FGAVDDD-----LQLTDFGRLMADFPVDACLARVLMRSAQYGCAADAAVIVAMLETRNVL 543 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 RP + +++KH F + D L +++ S + C ++L Y + Sbjct: 544 VRPASRGIEAEQKHVMFRHPDGDHLTLFKVFHAF------WRSGQSSQYCFDNFLAYQAL 597 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPA------EYREIHIALLTGLLSHIGMKDADKQEYT 645 ++ ++YTQL +++K+ I S + I A+L G + + K + Y Sbjct: 598 QQAVNVYTQLTKLMKKKNICFVSTYDDRSGKLDSVAIRKAVLEGFFTQVAYKPPGGELYK 657 Query: 646 GARN-ARFSIFPGS-GLFKKPPKWVMV--AELVETSRLWGRIAARIDPEWVEPV 695 R+ ++ S P W++ E+ + R+A+ I+PEW+ V Sbjct: 658 TVRDSQMVALHRHSFPSMSGSPSWIVYDRLEVQGQGGTFIRVASAIEPEWLLEV 711 >UniRef50_B0CX49 Predicted protein n=2 Tax=Agaricales RepID=B0CX49_LACBS Length = 706 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 206/660 (31%), Positives = 329/660 (49%), Gaps = 40/660 (6%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 L AA+ LP+ ++E I+ + V ++ GETGSGKTTQ+P+ + Sbjct: 43 AGPSSAPLNPAAQAIQEQRKQLPIYLGADALIEEIKKNDVTVLLGETGSGKTTQVPQYLL 102 Query: 116 ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 E G +I TQPR++AA ++A R+A E G +GY VRF + S +T +K MTD Sbjct: 103 ESGLAGNRMIAVTQPRKVAATSLAQRVAAEQNGPLGKVVGYAVRFDEKSSPHTRIKYMTD 162 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR--------------- 220 G+++ E+ D L +Y +I+DEAHER+L D L+ LK+L R Sbjct: 163 GMIMRELMSDPSLSRYSVVIVDEAHERTLRTDLLIANLKKLQKERNGSSNAKGKGNSNNS 222 Query: 221 PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFD 280 LKI+I SAT+D E+FS+ F+NA I+ V GR +PV++ + + D + + Sbjct: 223 KPLKIVIMSATLDAEKFSKFFDNAKILYVKGRQHPVKIFHSAEGQP------DYVDSAMR 276 Query: 281 AVDELSQ-ESHGDILIFMSGEREIRDTADALNK------LNLRHTEILPLYARLSNSEQN 333 ++ + GD+LIF+ G+ +I +++ + + P++A + + Sbjct: 277 TFFQIHTDQPPGDVLIFLPGQEDIESLEKSIDMFAKRLPQDSPEVLVCPMFAAQAPGKNA 336 Query: 334 RVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT--KVQRLPIEPIS 389 +VF + R+ +LATN+AETS+T+PG+KYVID G + +Y R L I+ Sbjct: 337 KVFLSPPPNTRKCILATNIAETSITIPGVKYVIDTGKCKEKQYLARMAGGFDTLLTRDIT 396 Query: 390 QASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIA 449 ++SA QR GR GR G+C RLY+ED F S +PEILR +L S ILQ+ LG D+ Sbjct: 397 KSSAMQRAGRAGREGSGLCFRLYTEDAFNSMALSGEPEILRCSLTSSILQLRCLGQ-DLM 455 Query: 450 AFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA 509 ++APD I ++ L +GA Q LTP GR ++ P++P+ A ++ + Sbjct: 456 ELDLMDAPDTDTICSALKTLFIIGAFDKQSQ-----LTPAGRHMASFPLEPQHACAIVAS 510 Query: 510 QKHGCVREAMIITSALSIQD-PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 ++HGC E + + S LS +K+ A E R+F D L +N+ Sbjct: 511 KEHGCSSEVIDVISVLSASSKLFLDVTEKRDAVSEARRKFRHPSGDHLTILNVVRAYQAI 570 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP-VNSEPAEYREIHIALL 627 + + + CR +LN + E ++I QLRQ +G+ S + L Sbjct: 571 ASSEKKKSRKDWCRKHFLNERTLIEAREIREQLRQTCTRVGVDYTTSCGENEGPVIACLG 630 Query: 628 TGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 GL+++ D ++ I PGS L K ++ ELV T++++ R + I Sbjct: 631 HGLVANSAFLQPDGSYKQTMGSSFVKIHPGSTLSDKKVPAIVYDELVYTNQIYARGVSSI 690 >UniRef50_UPI0000DB6CD8 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 33 n=2 Tax=Apocrita RepID=UPI0000DB6CD8 Length = 694 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 213/674 (31%), Positives = 350/674 (51%), Gaps = 44/674 (6%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVI 97 K P + + + +D+ + + +LPV + ++ +LE IR + +I Sbjct: 38 KIPKHEDSQQNVQTENVDKGNITLQQQR---------KSLPVYRLRKRLLEEIRRNSTLI 88 Query: 98 VAGETGSGKTTQLPKICMELGR-GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 V GETGSGKTTQ+P++ + G G G IG TQPRR+AA +VA R+A+E E G +GY Sbjct: 89 VIGETGSGKTTQIPQLLLSSGIAGCSGCIGVTQPRRVAAVSVARRVAQEQGVEAGKLVGY 148 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 VRF D S T +K +TDG+++ E D +L Y +I+DEAHERS+ D LLG + Sbjct: 149 CVRFEDVTSPQTRIKYLTDGMMVREAMTDEILSDYSVVILDEAHERSVQTDVLLGVARRA 208 Query: 217 LPRR-----PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTE 271 R P LK+++ SAT+D ++F+++F AP + + GR +PV++ + A ++ Sbjct: 209 QNLRKLKNLPPLKLLVMSATMDVDKFTKYFQ-APAVYLEGRQHPVKIYH------AVKSQ 261 Query: 272 RDQLQAIFDAVDELSQESHG--DILIFMSGEREI-------RDTADALNKLNLRHTEILP 322 D + ++ +++ DIL+F++G+ EI R A L+ ++ P Sbjct: 262 DDYAFSALVTAFQIHRDNPANEDILVFLTGQEEIEAAAVSARQVAKQLDGQGYPSLKVFP 321 Query: 323 LYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 LY+ L +Q F+ R+++L+TNVAETS+T+ GI++VID G + + T + Sbjct: 322 LYSALPTHQQLEAFKPSPPGMRKLILSTNVAETSVTIGGIRHVIDTGVVKARTHHPTTGL 381 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQM 440 L +E +S+A A QR GR GR + G C R Y++++F E PEI R +LA V LQ+ Sbjct: 382 DVLRVEKVSKAQAWQRTGRAGREAAGKCYRTYTKEEFERMKEMPVPEIQRCSLAGVALQL 441 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 A+G+ DI F F++ P K + V LE+LGA+ + S +LT LGR +S P+DP Sbjct: 442 LAIGV-DITTFDFMDKPPKEAVDVAVTCLEKLGAV----KGSPPQLTTLGRTMSLFPLDP 496 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 R +++L + +H C+ EA+ + S LS + P K+Q + RF E D + +N Sbjct: 497 RFTKVILASVEHQCLEEALTVVSLLSGESVFTDPPAKRQQAYVARSRFASPEGDHVTLLN 556 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 ++ ++ + C ++L++ + ++ QL + + S Sbjct: 557 VFRGYT------NTKQKKVWCHDNFLHHRNLEYAVEVRHQLAALADRANLERASCGTSTD 610 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 + ALL GL ++ D+ T + SI P S L P ++ E++ T R + Sbjct: 611 RLRKALLEGLHDNLAELQRDQTYVTVSSKQPVSIHPSSTLHATKPPLILFTEVIATGRCY 670 Query: 681 GRIAARIDPEWVEP 694 R + ID W+ Sbjct: 671 IRGLSVIDSSWLTE 684 >UniRef50_A7NAU7 ATP-dependent helicase n=16 Tax=Francisella RepID=A7NAU7_FRATF Length = 1444 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 318/575 (55%), Positives = 420/575 (73%), Gaps = 12/575 (2%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 ++ P+ITYPD LPV+++ DI + ++D+QV++VAGETGSGK+TQLPKIC++LG G +G Sbjct: 46 KQKILPKITYPD-LPVAERVDDIKKLLQDNQVIVVAGETGSGKSTQLPKICLDLGLGKRG 104 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRRLAAR++A+RIA E+ + + +K+RFSD S+NT++K+MTDG+LL+EI+ Sbjct: 105 LIGHTQPRRLAARSIASRIANEIGDQ--SKVSFKIRFSDQTSENTLIKVMTDGVLLSEIK 162 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 DR L QY+ IIIDEAHERSLNIDFLLG +K++LP RPDLK+IITSATID ++F F N Sbjct: 163 NDRFLSQYEVIIIDEAHERSLNIDFLLGCIKKILPFRPDLKVIITSATIDHQKFINFFQN 222 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREI 303 A I +SGRTYPVE+RY+ + D E + I A+DEL GD+L+F+ ER+I Sbjct: 223 AKDIIISGRTYPVEIRYQ---NDEDFDEFSLQERILYALDEL---GRGDVLVFLPTERDI 276 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKY 362 +T LNK NLR TE+LPL++RLSN +QN++F RR++LATNVAETSLTVP IKY Sbjct: 277 HETLAYLNKQNLRFTEVLPLFSRLSNKDQNKIFNPEGSVRRVILATNVAETSLTVPRIKY 336 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 VID G ARISRYSYRTKVQRLPIE ISQASANQR GRCGR+S GICIRLYSE+DF +R E Sbjct: 337 VIDSGLARISRYSYRTKVQRLPIEKISQASANQRAGRCGRLSAGICIRLYSEEDFNNRKE 396 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 +T+PEILRTNLASVILQM L LG I FPF++APD R ++DG +LL EL AI ++ S Sbjct: 397 YTEPEILRTNLASVILQMLFLKLGSIQDFPFIDAPDARFVKDGFKLLFELQAI-SELNYS 455 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 K+T G +++ +P+DP+LA++V+E + +RE + I S LS+QDPRERP++ QQ +D Sbjct: 456 KPKITDDGMKMAVMPLDPKLAKIVIEGYRQKTLREIVSIVSFLSVQDPRERPLNLQQKAD 515 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 EKH DK SDF+A +NL N L K LS+ + + ++++ +R EW DIY Q+ Sbjct: 516 EKHSVDKDKSSDFVAILNLANRLNSDLKGLSNREKKEYFKKNFISLVRFNEWNDIYRQII 575 Query: 603 QVVKELGIPVNSEPA-EYREIHIALLTGLLSHIGM 636 +V+ G +NS+ + H L HIG Sbjct: 576 EVIHGFGWKLNSQLVIKKDSGHSGLDPESFEHIGK 610 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 170/507 (33%), Positives = 282/507 (55%), Gaps = 10/507 (1%) Query: 614 SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAEL 673 S Y +H A+ +G LS+IG + + EY GAR +F IFPGS FK PKW++ +E+ Sbjct: 664 SAMINYENLHKAIASGFLSNIG-YNYENAEYLGARGLKFFIFPGSFQFKAKPKWLLSSEI 722 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAAR 733 VET++ + R A+I+PEW+E +A HL+K+ Y EP W + + AV+ E+VT+YGL IV+ R Sbjct: 723 VETTKTYVRNVAKIEPEWLESLASHLVKKHYDEPVWSKKRRAVIVNERVTLYGLEIVSKR 782 Query: 734 KVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDE 793 V YS+I+P RE+FIR ALV+GD+ ++ F+++NLKL +VE+LE+KSRR+DILVD++ Sbjct: 783 VVQYSKINPREAREIFIREALVKGDFDSKTYFYQQNLKLINQVEDLENKSRRKDILVDEQ 842 Query: 794 TLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWH 853 T+FE YD IS +V + FD W K V + F L++ GA++I++ +P+ Sbjct: 843 TMFEHYDAFISDEVCNGATFDKWLKTVRKAQQQKFIFGLESLMQHGAKEITQQKFPDVLT 902 Query: 854 QGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKP 913 G++ L L Y F+P + DG TV +P+ +N + + EW + G + ++AL+++LPK Sbjct: 903 IGDMHLPLEYNFDPLDERDGATVTVPIVFINNISSAVLEWGVYGFLYDKIVALLRALPKN 962 Query: 914 VRRNFVPAPNYAEAFLGRVKPLEL---PLLDSLERELRRMTGVTVDREDWHWDQVPDHLK 970 +R+N VP P YA+A + + PL + + + R+ G VD W +++ +L Sbjct: 963 IRKNCVPVPTYAQAIFESLDFDKDRYIPLKSVIAKHITRIVGFVVDETVWQNEELEKYLV 1022 Query: 971 ITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE 1030 + +VVD+ K L G+ + LK LK V + A +++ + W F + + + Sbjct: 1023 LNIKVVDEHGKTLALGKDINTLKQKLKNLVNKPKQA-----VDEKIYYDWDFADIALTNQ 1077 Query: 1031 QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLP 1090 K VK + L + + V + E + M L+RL+ + + + + + Sbjct: 1078 IKEYGIVVKVYNCLEEYKGGVKLSYKATLAEAQSCMKRALKRLIKIRLQNQLSQKIKN-N 1136 Query: 1091 NKAKLGLYFNPYGKVLELIDDCISCGV 1117 + L + ++D I Sbjct: 1137 DLTSLSMSLKLSDSKDNVVDKAIDLSF 1163 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 4/208 (1%) Query: 1093 AKLGLYFNPYGKVLELIDD-CISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVD 1151 + + + + D D G +T+ F + + Sbjct: 1217 QESSILKHDSKSSETMFSDYAQQSVQDDSNVNLAGLPYTKSDFEQFFKAGISSFVANKTK 1276 Query: 1152 IAKQVEQILTAVFNINKRLK-GRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTL 1210 + +IL A ++K+L ++ + + ++ ++ L +++ L Sbjct: 1277 VELLFTEILRAKEQLDKKLNINKIPLNFIELFTAVRNELNELFTDNYLSQ-PMIYLQRYK 1335 Query: 1211 RYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEE 1270 Y+QA+E RL+K ++ RDR L+ + ++ + + DE+V +IR++I+E Sbjct: 1336 YYIQALENRLDKAKLNLQRDRNYQLEADELKAKLAKKLVT-KHLSTGDEEVTKIRFLIKE 1394 Query: 1271 LRVSYFAQQLGTPYPISDKRILQAMEQI 1298 L +S++ Q + T IS K+IL + QI Sbjct: 1395 LWISWYLQNIKTSESISVKKILVYINQI 1422 >UniRef50_B8C4C7 Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana RepID=B8C4C7_THAPS Length = 702 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 217/697 (31%), Positives = 340/697 (48%), Gaps = 87/697 (12%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG------RGIKGLIGHTQP 130 LPV Q + ++ + + ++ VV+ ETGSGK+TQ+P E G + I TQP Sbjct: 15 LPVYQHRAELCKLVANNDVVLAVAETGSGKSTQIPAYVYESGLLTTSAKAYARTICVTQP 74 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS----DNTMVKLMTDGILLAEIQQDR 186 RR+AA T+A R++EEL PG +G++VRF D + T + TDG+LL E D Sbjct: 75 RRVAAVTLAKRVSEELNCVPGTIVGHRVRFDDTTDVRGFNTTKIIYATDGMLLREAMSDP 134 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR-PDLKIIITSATIDPERFSRHFNNAP 245 LL +Y +++DEAHERSL D L G ++ L P L++ + SAT+D F F + Sbjct: 135 LLQRYGLVVLDEAHERSLQTDVLFGMKQDALELGVPPLRVCVMSATLDIATFQAFFPGSA 194 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIR 304 +I++ GR +PV+ Y D + D + + ++ + GD+L+F+ G+ EI Sbjct: 195 MIKIPGRQFPVQAVY------TDSIQEDYIDSALKTAIQIHKYGEEGDVLVFLPGQDEIE 248 Query: 305 DTA---------------------DALNKLNLRHTEILPLYARLSNSEQNRVFQSHS--- 340 D A D+ N + + I LYA L Q F+ Sbjct: 249 DLASLNNNNNTDTVQNIKGIGTSIDSGNSMIVNGVLICVLYAALPPDAQMIAFRPKPEGC 308 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 R+I+L+TN+AETS+T+ GIKYV+D G + YS T ++ L + IS+A A QR GR Sbjct: 309 TRKIILSTNIAETSVTLDGIKYVVDCGKHKSREYSSSTGMESLKVSDISKAQAAQRMGRA 368 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GRVSEG+C+RLY E F S + T PEILR NLASV+LQ+ +G+ D +F F+ P Sbjct: 369 GRVSEGVCLRLYPEIAFDSLADTTVPEILRVNLASVVLQLKGMGVHDPRSFSFLTPPSPE 428 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 NI LL LGAI + LT G+++S+LP+DP A ++L++ K CV E + Sbjct: 429 NIVKSFELLTTLGAID-----KSMNLTMYGKEMSKLPLDPVFAHLLLQSPKFECVSEVLT 483 Query: 521 ITSALSIQDPRERPMDK--------QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572 + LS ++ RP + + HRRF E D +N++N ++ + Sbjct: 484 VVGMLSAENIFYRPGGRGDDSGGSLSAKATAAHRRFESYEGDLPTLMNVYNAWKKEAIYV 543 Query: 573 SSNAFRR----LCRTDYLNYLRVREWQDIYTQLRQVV------KELGIPVNS-EPAEYRE 621 NA + C+ ++++ + D+ QL ++ LG+ VNS + Sbjct: 544 PGNAAKMLHGDWCKQNFISGRALVRAHDVRNQLSELCCRAVEKNGLGMDVNSTCVDDMTT 603 Query: 622 IHIALLTGLLSHIGMK-------------------DADKQEYTGARNARFSIFPGSGLFK 662 + GL + + T + S+ P S +F Sbjct: 604 FFKCVCAGLFLQVATRVPSLAQTSKSSAPKAGSIPSTRGHYKTRIGGSIVSVHPMSSMFG 663 Query: 663 KP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 + PK V+ +L+ T+R++ R +I EW++ + Sbjct: 664 RNPAPKCVVYTDLLFTTRMYIRGVTQIREEWLDDITP 700 >UniRef50_Q8IX18 Probable ATP-dependent RNA helicase DHX40 n=31 Tax=Deuterostomia RepID=DHX40_HUMAN Length = 779 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 212/703 (30%), Positives = 360/703 (51%), Gaps = 48/703 (6%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIR 91 ++ + + + + +E + + E P+ ++++ I++A+R Sbjct: 10 RAPRRQEEGERSRDLQEERLSAV--CIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVR 67 Query: 92 DHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPG 151 D+ +IV G TGSGKTTQLPK E G G+IG TQPR++AA +VA R+AEE+K G Sbjct: 68 DNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLG 127 Query: 152 GCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLG 211 +GY+VRF D S T +K MTDG LL I D L ++ II+DEAHER+L D L G Sbjct: 128 SKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFG 187 Query: 212 YLKELLP-----RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEE 266 LK+L R+ LK+++ SAT++ + S F N PI ++ GR YPV ++ ++ Sbjct: 188 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247 Query: 267 ADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN----------- 314 D +QAI ++ E GDIL+F++G+ EI + + L ++ Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307 Query: 315 --LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 L ILP Y ++ +Q R+F R+ V++TN++ TSLT+ GI+YV+D G + Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEIL 429 ++ R + L + PIS++ A QR GR GR S G C R+YS+D + P+ PEI Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 RT+L SV+L + L + D+ FP+++ P++R I + ++ L + AI + +T L Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAID-----RSGHVTRL 482 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD--KQQASDEKHRR 547 G + + P+ P L V++A C + I + LS+++ RP+D Q+ ++++HR Sbjct: 483 GLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRE 542 Query: 548 FHDKES---DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 K DF ++ ++ SS A C+ ++++ + + QLR++ Sbjct: 543 LAAKAGGFNDFATLAVIF------EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596 Query: 605 VKELGI-----PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYT-GARNARFSIFPGS 658 +++L E ++ + L G ++ + + T R + I P S Sbjct: 597 IRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSS 656 Query: 659 GLFKKPP--KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 L ++ +W++ E++ T++++ RI I EWV + L Sbjct: 657 ALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKL 699 >UniRef50_B2SSX2 ATP-dependent helicase HrpA n=13 Tax=Xanthomonadaceae RepID=B2SSX2_XANOP Length = 1373 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 332/669 (49%), Positives = 444/669 (66%), Gaps = 31/669 (4%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVK-KVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 T ++ +D M DR R + K NP + A Q +A + + R Sbjct: 10 NTLRERRRAVDGAMSHDRGRLLGLWSRWQGKPGNPQVRDAFEQALAA----SQAQRQARA 65 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 +P IT + LP++++ + I+ IRDHQVV++AGETGSGKTTQLPK+C+ GRG G+I Sbjct: 66 EQQPAITLDNQLPIAREAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMI 125 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AAR VA R+AEELKT G +G++VRF+D VS+ + +K MTDGILLAEI D Sbjct: 126 GCTQPRRIAARAVAARVAEELKTPLGTIVGFQVRFTDRVSEQSRIKFMTDGILLAEIASD 185 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 R L YDTII+DEAHERSLNIDFLLGYLK+LL +R DLK+I+TSATID ERF++HF+NAP Sbjct: 186 RWLSAYDTIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQHFDNAP 245 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDT-----------ERDQLQAIFDAVDELSQ-ESHGDI 293 +I V GRT+PVEVRYRP+ + D+ ER AI A+DE+++ + GD+ Sbjct: 246 VINVEGRTFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRIDPRGDV 305 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 L+F+ GEREIRD AL + R TE++PLYARLS ++Q+RVF RR+VLATNVAET Sbjct: 306 LMFLPGEREIRDAHQALERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAET 365 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLTVP I+YV+DPG AR+ RYS R K+ RL IEPISQASANQR GRCGR++EGIC RLY+ Sbjct: 366 SLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGICYRLYA 425 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E DF +RP FTDPEI R++L+ VIL+M LGLG I FPF+EAPD+R + DG + L ELG Sbjct: 426 EADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQLLELG 485 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 AI +LT G Q+++LPVD +LARM++ AQ+HGC+RE +II + L IQDPRER Sbjct: 486 AIDA-----QRRLTATGCQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRER 540 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P + ++A+D H F D S+F+ + LW+ + + L+ + R C +L +LR+RE Sbjct: 541 PAEAREAADNAHALFADVRSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMRE 600 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 W++++ QLR + +ELG + LL G A + + R R Sbjct: 601 WRELHRQLRLLCEELGWSEEPANV----MLAPLLAG-----ASAPAREDGHNANRPTRGQ 651 Query: 654 IFPGSGLFK 662 + + L + Sbjct: 652 LHRAARLAR 660 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 223/689 (32%), Positives = 353/689 (51%), Gaps = 10/689 (1%) Query: 611 PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMV 670 A Y+ +H ALL GL + IG + +K +Y AR RF FPGS L +KPP W++ Sbjct: 692 SERERAAAYQSLHRALLAGLPTQIGHRT-EKGDYLAARQRRFVPFPGSALARKPPPWIVA 750 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIV 730 A L++T ++WG A I+P+W HL+ R + + HW RAQG V+A+E+++++GL + Sbjct: 751 ATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASEQISLFGLVLA 810 Query: 731 AARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILV 790 + V++ +IDPA +LF+R LV G+ TR AF +NLK+ + E E K RR I+ Sbjct: 811 PKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVA 870 Query: 791 DDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPN 850 D++ +Y RI ++ SA D+WWK + + L++ + ++ E +P Sbjct: 871 DEDWQARWYLDRIPAELHSASGLDAWWKSLPPDKRRSLHWSLNDVLP--GEGCEADRFPK 928 Query: 851 FWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSL 910 ++ G+ +L L Y+FEPGA DGVT+ + L LLN ++ + W PG + ALI+SL Sbjct: 929 YFPLGDARLPLHYRFEPGAIDDGVTLDVALHLLNALDPARLSWLAPGFVADKASALIRSL 988 Query: 911 PKPVRRNFVPAPNYAEAFLGRVK-PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHL 969 PK RRN+VPAP++ AF + L R L + TG V D+ + HL Sbjct: 989 PKAQRRNYVPAPDFGRAFYEAFNVASADDIRGELARFLTKATGAHVAALDFDEQALDTHL 1048 Query: 970 KITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESY 1029 + RV DD K L E R L L+ + + +A A + GL + +PE Sbjct: 1049 LMNLRVRDDDGKVLDESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFPTAPIPEQV 1108 Query: 1030 EQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKL 1089 + G V A+PALVD+ D+ A+++F + E +A G+RRLL + + IK ++L Sbjct: 1109 AGEAG---VPAYPALVDQGDNAALRIFADRNEAARAHPRGVRRLLEIALADKIKQARKQL 1165 Query: 1090 PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTV 1149 P K GL + L D + ++ ++ G + FA + L Sbjct: 1166 PVSPKTGLLYAAIESQERLRGDLVDAALNAVLADGLGAIRDPGAFAQRRDDAIKRLFGEA 1225 Query: 1150 VDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDT 1209 ++ E IL AV + L+ + L D++ Q+ LV+ GF+ L + Sbjct: 1226 MERLTLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPADALANY 1285 Query: 1210 LRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIE 1269 RYL+A+ R E+ DP RD+A+ML+++ A + + ED + +RW +E Sbjct: 1286 PRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAH---GLQNREDWQALRWDLE 1342 Query: 1270 ELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 ELRVS FAQ+LG +S K++ Q + + Sbjct: 1343 ELRVSVFAQELGAKSGVSAKKLSQRVAAL 1371 >UniRef50_C5DCP1 KLTH0B04664p n=2 Tax=Saccharomycetales RepID=C5DCP1_LACTC Length = 700 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 218/681 (32%), Positives = 350/681 (51%), Gaps = 36/681 (5%) Query: 39 NPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIV 98 + + + + ++A K L A + LPV + K I+ I +QV I+ Sbjct: 25 DKRSSADGSSDHEDGLTKSASKHDLAREAASLLKVRATLPVYKHKDSIMSHINKNQVTIL 84 Query: 99 AGETGSGKTTQLPKICME-LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYK 157 GETGSGK+TQ+P+ ME I TQPRR+AA +A+R+A+E G +GY Sbjct: 85 IGETGSGKSTQIPQFLMENFPEKTDKRIAVTQPRRVAAINLASRVAQEYGCRLGERVGYS 144 Query: 158 VRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL 217 VRF + + T +K +TDG+LL EI D+ L Y +IIDEAHER++ D +LG+LKEL+ Sbjct: 145 VRFDNKSNARTKLKYLTDGMLLREIMLDKNLSDYSCVIIDEAHERTILTDLILGFLKELI 204 Query: 218 PR-RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ 276 R DLK+++ SAT+ E+FS F API+ V GR +PV+ Y + D + Sbjct: 205 NSSRQDLKVVVMSATLQAEKFSEFFGRAPILFVEGRKFPVQRSYLKAQCD------DVVD 258 Query: 277 AIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNK------LNLRHTEILPLYARLSN 329 AI +L+Q E GDIL FM G+ EI L+K ++ LPLYA L Sbjct: 259 AIIRCCVQLNQSEQMGDILCFMPGQEEIDKAVAILSKVGEHLGASVPRLVALPLYAALPP 318 Query: 330 SEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP 387 +EQ +VF G R++V +TN+AETS+T+ G+K+V+D G ++ + ++ + L P Sbjct: 319 AEQAKVFAPVKGFKRKVVFSTNLAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVP 378 Query: 388 ISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGD 447 IS+ASA+QR GR GR S G C RLY E D+ P T+PEI R+ + S IL + +G+ D Sbjct: 379 ISKASASQRTGRAGRESAGKCFRLYREQDYQKLPNQTEPEIARSEVTSPILMLKKVGVKD 438 Query: 448 IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVL 507 I + ++E P K+ I ++ L +LGA+ + K+T G++++ LP+ P L+ ++L Sbjct: 439 IVNWSWLENPGKQAILMALQELFQLGALDD-----SGKITNKGQKMALLPLAPHLSSVLL 493 Query: 508 EAQKHGCVREAMIITSALSIQDPRERPM-DKQQASDEKH---RRFHDKESDFLAFVNLWN 563 +A + GC+ + I S LS+++ P +++ +EK K D + ++ Sbjct: 494 KAHEDGCLLPVIDIVSCLSVENLLINPSPEQRDEVNEKRFSIATRGSKYGDLVMLKEFYD 553 Query: 564 YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV------NSEPA 617 + A + C+ ++ + I QL ++ L S+ Sbjct: 554 AYMSLKSAAEKDD---WCKELCVSKRGFKNVVKIRAQLLSYMERLFKEKLSDNEDESDSF 610 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF-KKPPKWVMVAELVET 676 + + I L G + + D+ T S+ P S LF + ++ E V T Sbjct: 611 DIKAIVKCFLAGFAKNTAIGMPDRSFRTSTTGETISVHPSSMLFMDRSCPAILYTEYVFT 670 Query: 677 SRLWGRIAARIDPEWVEPVAQ 697 ++ + R +R++ W++ VA Sbjct: 671 TKGYARNVSRLELSWLQEVAG 691 >UniRef50_B3LCV7 ATP-dependent RNA helicase, putative n=3 Tax=Plasmodium RepID=B3LCV7_PLAKH Length = 1060 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 199/695 (28%), Positives = 344/695 (49%), Gaps = 85/695 (12%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 LP+ + DIL+AI++++++I+ GETGSGK+TQL + E + G I TQPRR+ Sbjct: 378 RKRLPIFSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLHECKYHLYGNIVCTQPRRI 437 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 A +ANR+A+E+ + G +GY +RF + S++T + MTDG+ L + + L Sbjct: 438 ACIAIANRVADEMNVKVGKEVGYVIRFQNKTSESTKIVYMTDGMFLRLLLYNPTLDDISV 497 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 +IIDEAHER+L+ D +L +K++ R D++III+SAT+D E+ S +FN API V GR Sbjct: 498 LIIDEAHERALHTDVILPIVKDICNFREDIRIIISSATLDAEKISTYFNCAPIFYVPGRK 557 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK 312 Y V++ Y + E + L AI + ++ + GDIL+F+ G+ EI L Sbjct: 558 YNVDIYY------TINNESNYLSAIVITILQIHVTQEKGDILVFLPGQFEIELVQQELEN 611 Query: 313 L------NLRHTEILPLYARLSNSEQNRVFQS---------------------------- 338 R+ ILP+Y+ L +Q R+F+ Sbjct: 612 KLIELAPRFRNMIILPIYSSLPVEQQARIFEDVADEDHGKGDAPDSGNPGAEQPDGASST 671 Query: 339 --------------------HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 378 R+I+L+TN+ ETS+T+ I YVID G + Y+ + Sbjct: 672 NTNIQTNELAPADQPKAIMRRGTRKIILSTNICETSITIDNIVYVIDSGLCKQKVYNPNS 731 Query: 379 KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVIL 438 ++ L P S+AS NQR GR GR +G C RL+++ F+ + + PEI R ++S+IL Sbjct: 732 GIESLVTLPCSKASVNQRTGRAGRKQDGKCFRLFTKKSFIDLNDNSVPEIQRCEVSSMIL 791 Query: 439 QMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPV 498 + +LG+ DI F F++ P I G+ LL LGA+ + LT GR++++ P Sbjct: 792 LLKSLGMDDIINFDFLDPPSPVVIIKGLELLYSLGALNDEGN-----LTKTGRKMAEFPT 846 Query: 499 DPRLARMVLEAQK-HGCVREAMIITSALS-IQDPRERPMDKQQASDEKHRRFH-DKESDF 555 D + ++M+L A + + CV E + IT+ L+ + K++ ++ + F + DF Sbjct: 847 DVKSSKMILAASEKYNCVEEILCITAMLTHANNIFYVQKGKEKEAENVKKMFTIEGGGDF 906 Query: 556 LAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615 L +N++ E +N C +L Y + + +DI TQL + +++ +P +S Sbjct: 907 LLLLNIYKQCEE------NNFSTSFCYDHFLQYHTMIKIKDIKTQLVSICEKIDLPSSSC 960 Query: 616 PAEYRE----IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK------PP 665 + + + +++ ++ + + N SI+P S L KK Sbjct: 961 GIQNHDAICNLKKCIVSAFFTNAALPVNKNELKIIKLNQVVSIYPSSVLAKKNIMEEHKN 1020 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 ++ E+++ ++ + R + + + +A Sbjct: 1021 ACIIFYEVIKINKSYIRHNIPVTKDMLYEIASFYF 1055 >UniRef50_C1E1Z9 Predicted protein n=2 Tax=Micromonas RepID=C1E1Z9_9CHLO Length = 725 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 229/720 (31%), Positives = 350/720 (48%), Gaps = 70/720 (9%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLL---REAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 K P+A + E+ +E +G L+ R + LP+ + + IL + Sbjct: 9 KKPEASLPLSAEVDREGPGDSGGRLVVFNRNENLALQAQRERLPIFKTRDAILHLVETRA 68 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGC 153 ++ G+TG GKTTQ+P+ +E G G + TQPRR+AA TVA+R+A+E+ G Sbjct: 69 TTVLVGQTGCGKTTQVPQYLVEAGWTAGGRLVACTQPRRVAAMTVASRVADEMGVTLGAE 128 Query: 154 IGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGY 212 +GY VRF + + T V+ TDG+LL E+ +D LL +Y +++DEAHERSL D LLG Sbjct: 129 VGYAVRFENVSTPGVTRVRFCTDGVLLRELMEDPLLSRYSVVMVDEAHERSLATDLLLGL 188 Query: 213 LKELLPRRPDLKIIITSATIDPERFSRHFN---------------NAP-----IIEVSGR 252 LK++ RRPDL+III SATI E F+ F+ NAP I+ V GR Sbjct: 189 LKKVQRRRPDLRIIIASATIQAEEFAAFFDTRHLEPKPASEASSVNAPSREPGIVSVEGR 248 Query: 253 TYPVEVRYRPIVEEADDTERDQLQAIF-DAVDELSQESHGDILIFMSGEREIRDTADALN 311 + V + Y + D ++A A+D E GD+L+F++GE EI L Sbjct: 249 AHTVLIHYL------EKPVPDYVKAAVGAAIDVHRAEGPGDVLVFLTGEEEIEAAVSMLQ 302 Query: 312 KL-------------------NLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNV 350 + + PLYA LS ++Q F+ R+IV+A+NV Sbjct: 303 EEAEDNSRRLLGGGAGTNPAGGPERFTVHPLYAGLSPAQQMEAFRPAPRYTRKIVVASNV 362 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETS+T+ G+ YV+D + Y ++ L S+ASANQR GR GRV G R Sbjct: 363 AETSVTIEGVVYVVDCCFVKQKAYDPTRGMESLLTAEASRASANQRAGRAGRVRPGKAYR 422 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 L +E F PE PE++R++LA+ +LQ+ ALG+ +I F ++ P N+ + LL Sbjct: 423 LCTEKAFRDLPETAPPEMIRSDLAATVLQLKALGIDNIMNFEWLSPPPAANMIKALELLY 482 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 L AI D + + PLG L++LP++P+L + +L + + GCV E + +++ L +Q Sbjct: 483 ALQAIDDDARLTK----PLGMHLAELPLEPQLGKALLVSGELGCVEEMLTVSAYLQVQTL 538 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 P +Q+ DE RF E D + +N+ R + L++ Sbjct: 539 WVSPRGRQKRLDECRDRFAVAEGDAVTALNIHTAW-------CGGRARSFADKNMLSHRA 591 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQ------EY 644 + DI QL + V+ +G+ V+S + + A+ G ++ Sbjct: 592 LVRASDIRAQLARHVRRVGLVVSSAGKDSAPVRRAMTAGFFANAAALAPHGGGAEGSAFR 651 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 + A I PGS LF+ P V+ A V T R + R IDPEW+ +A H T Sbjct: 652 SVRGGATLFIHPGSVLFRARPAMVVYAAAVRTGREYMRDVTAIDPEWLSELAPHFYAMTQ 711 >UniRef50_Q4UH89 ATP-dependent helicase, putative n=2 Tax=Theileria RepID=Q4UH89_THEAN Length = 1160 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 203/640 (31%), Positives = 328/640 (51%), Gaps = 78/640 (12%) Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 K +IG TQPRR++ +A R+++E+ G +GY +RFSD SD T++K MTDG+LL Sbjct: 519 TEKKMIGITQPRRISCINIAKRVSDEMYCIIGNEVGYCIRFSDVTSDKTIIKYMTDGMLL 578 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 EI D LL Y TI++DEAHER++ D L LKE +R D ++I+TSAT++ E+FS+ Sbjct: 579 REILHDPLLNNYITIMLDEAHERTIATDVLFSLLKETCMKRKDFRLIVTSATLESEKFSK 638 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMS 298 +F N+ I ++ GR++PVE+ + + E D L+ + + E GDIL+F++ Sbjct: 639 YFFNSKIFKIPGRSFPVEIFHS------KEQEFDYLETSLITILNIHLNEKPGDILLFLT 692 Query: 299 GEREI-------RDTADALNKLNLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATN 349 GE +I + + L +N+ + P+Y+ L +Q ++F R+ +LATN Sbjct: 693 GEEDIETGIKILEERLNKLKNMNIPKLLLFPVYSALPQDQQQQIFQPAPPGTRKCILATN 752 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AE S+T+ GI YVIDPG +I Y+ +T ++ L I PISQA+A QR GR GR + G C Sbjct: 753 IAEASITIDGILYVIDPGLCKIKSYNPKTGMESLIITPISQANARQRAGRAGRTAPGKCF 812 Query: 410 RLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE----APDKRNIQD 464 RLY+E F PEI R NL +V++ + ++G+ D F F++ P + D Sbjct: 813 RLYTEKTFHEEMLPTPIPEIQRVNLTNVVIILKSMGINDFLHFDFMDKYALRPCNEMLID 872 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 + +L LGA+ + LT LGR+++Q P+DP L++++L + + C E + I S Sbjct: 873 ALDILYHLGALDDEGL-----LTHLGRKMAQFPIDPTLSKILLYSIEMDCYNEIITIISM 927 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRT 583 LS+Q+ RP DK++ +D+ R+F E D L ++ ++N S+N F C Sbjct: 928 LSVQNIFYRPSDKREKADQSRRKFFQSEGDHLTYLYIYNQW-------SNNQFSNYYCYN 980 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMKDA 639 ++L Y + + QDI QL ++ + + I + +G H +D Sbjct: 981 NFLQYRALIKVQDIKKQLISIIDKYKFMKKKMKIDNLNKTERIQKCICSGFFHHSAKRDE 1040 Query: 640 DKQEYTGARNARFSIFPGSGLFK------------------------------------- 662 D T + I P S LF+ Sbjct: 1041 D-SYRTLLDEQKVYIHPSSSLFQRYCLPTEENLFPLTRSIFDIYFFLPYFSNYFYYLINN 1099 Query: 663 --KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 + P++V+ EL+ TS+ + R I +W+ +A + Sbjct: 1100 CIRNPEYVLYHELILTSKEYMRDLTIIKSKWLLELAPTMF 1139 Score = 82.6 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 34/54 (62%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 + + + NLP+ + +++I+ I +Q++IV GETGSGKTTQ+P+ E Sbjct: 366 KRVYKNILEERKNLPIYKLREEIINEIIHNQILIVIGETGSGKTTQIPQYLYES 419 >UniRef50_P36009 Probable ATP-dependent RNA helicase DHR2 n=16 Tax=Saccharomycetales RepID=DHR2_YEAST Length = 735 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 218/701 (31%), Positives = 364/701 (51%), Gaps = 43/701 (6%) Query: 29 RRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILE 88 +R + K + + + + + + K L A+ + + LPV Q K++I+ Sbjct: 34 KRASKIVKFNDSGEGDHVSDQRSNKENVLTYKSLKSRASD-LLKMRETLPVYQHKREIMS 92 Query: 89 AIRDHQVVIVAGETGSGKTTQLPKICMELGRGI--KGLIGHTQPRRLAARTVANRIAEEL 146 I + V ++ GETGSGK+TQ+P+ +E G I TQPRR+AA +A R+A+E Sbjct: 93 YIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEH 152 Query: 147 KTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNI 206 + G +GY VRF + + T +K +TDG+LL E+ + L +Y I+IDEAHER++ Sbjct: 153 GCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLT 212 Query: 207 DFLLGYLKELLPR-RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 D +LG+LK L+ RPDL+II+ SAT+ E+FS FNNAPI+ V GR + V+ Y Sbjct: 213 DLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPT 272 Query: 266 EADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL--------NLR 316 + D + A+ +++Q E GDIL F+ G+ EI + K+ + Sbjct: 273 D------DIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVP 326 Query: 317 HTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRY 374 PLYA L +Q+ VF G R++V +TN+AETS+T+ G+K+V+D G ++ + Sbjct: 327 LIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVW 386 Query: 375 SYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLA 434 ++ + L PISQASA QR GR GR SEG RLY E D++ P+ ++PEI R+++ Sbjct: 387 RHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVT 446 Query: 435 SVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLS 494 S +L + G+ D+ + + E P K I G++ L ELGA+ + K+T G+Q++ Sbjct: 447 SPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALD-----TRGKITKRGQQMA 501 Query: 495 QLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM-DKQQASDEKHRRFHDKE- 552 LP+ P L+ ++++A + GC+ + + I S LS+++ P +++ +E+ + Sbjct: 502 LLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGK 561 Query: 553 --SDFLAFVNLWN-YLGEQQKALSSNAFRR-LCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 D + L++ Y E K+ +++ R C+ ++ + + QLR K L Sbjct: 562 RYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRL 621 Query: 609 ----------GIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 + + +I LTG + + + D+ T + SI P S Sbjct: 622 FSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSS 681 Query: 659 GLF-KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 LF K +M E V T++ + R +RI+ W++ V + Sbjct: 682 MLFMNKSCPGIMYTEYVFTTKGYARNVSRIELSWLQEVVTN 722 >UniRef50_Q87DR2 ATP-dependent helicase n=8 Tax=Xylella fastidiosa RepID=Q87DR2_XYLFT Length = 1478 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 221/691 (31%), Positives = 352/691 (50%), Gaps = 10/691 (1%) Query: 609 GIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWV 668 I A Y+ +H ALLTGL IG + +K ++ R RF +FPGS L KKPP WV Sbjct: 796 HIGERERAAAYQALHRALLTGLPIQIGHRT-EKGDFQAPRQRRFMLFPGSMLAKKPPPWV 854 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLP 728 + A L++T ++WG A I+P+WV HL+ R + PHW R QG V+ +E+++++GL Sbjct: 855 LAANLLDTQKVWGLTNAAIEPDWVIAELPHLLMRKHFNPHWSRTQGRVLVSEQISLFGLL 914 Query: 729 IVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 + + ++Y +IDP +LF+R LV G+ TR F +NLK+ + E E K RR I Sbjct: 915 LAPKKPMHYGRIDPVAAHDLFVRQGLVTGEINTRAGFVADNLKVLEQAHEEEAKLRRAGI 974 Query: 789 LVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDY 848 + D++ +Y R+ D+ +A DSWWK + E L + L+ + + Y Sbjct: 975 VADEDWQARWYFDRVPSDIHTADALDSWWKGLPVEKRHGLYWSLIDLLPGEGGE--EDRY 1032 Query: 849 PNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIK 908 P ++ G+++L L Y F+PGA DGVT+ +PL LLN ++ W +PG + ALI+ Sbjct: 1033 PKYFALGDVRLPLHYSFDPGAVDDGVTLEVPLHLLNALDPVRLSWLVPGFVADKAAALIR 1092 Query: 909 SLPKPVRRNFVPAPNYAEAFLGRV-KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPD 967 SLPK +RR++VPAP++A AF +P + L R L R+TGV V D+ + Sbjct: 1093 SLPKALRRSYVPAPDFARAFAQAFQQPSADEMRGELARFLSRITGVRVAAIDFDEQTLEP 1152 Query: 968 HLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPE 1027 +L + R+ D+ + L E R L+ E A A + L + +P Sbjct: 1153 YLHLRVRLYDESGQVLAESRDFDALRARFGSYSGEAFVARAGRTLIMEELREFPAVSIPL 1212 Query: 1028 SYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHE 1087 + G V +PALVD+ + A+++F +P E Q +G+RRLL + + + IK + Sbjct: 1213 QLTGEAG---VPMYPALVDDGEMAALRIFADPTEAAQVHPHGVRRLLEIALANKIKQARK 1269 Query: 1088 KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELND 1147 +LP +K GL + L DD + ++ ++ + FA + +L Sbjct: 1270 QLPVSSKSGLLYAAIESKECLRDDLVKAALNAVLAHGLESIRDPVAFAQCRDVAAQQLFS 1329 Query: 1148 TVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLG 1207 + E+IL AV + L+ + L D++ Q+ LVY GF+ L Sbjct: 1330 EAMARLSLAEEILAAVAELKPLLEAPLMGWARGNLDDMERQLAQLVYPGFLRQTPADVLT 1389 Query: 1208 DTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWM 1267 RYL+A+ R E+ DP RD+A+ML+++ A + + + + +RW Sbjct: 1390 QYPRYLKAMMMRSERAKRDPSRDQARMLELKPFLDALEVAMA---QGVSDTPGWETLRWD 1446 Query: 1268 IEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +EELRVS FAQ+LG IS K++ Q + + Sbjct: 1447 VEELRVSLFAQELGVRSGISVKKLAQRLAAL 1477 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 312/656 (47%), Positives = 421/656 (64%), Gaps = 71/656 (10%) Query: 13 QQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEIT 72 ++ +D M RDR R + + +A FQ + + + + +RE +P +T Sbjct: 28 RRAIDDAMTRDRGRLLGLWSRWQSQPHDHEARANFQRV---LSASRAQRQVRENNQPVVT 84 Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 LP++Q+ + I+ IR H VVI+AGETGSGKTTQLPK+C+ GRGI G IG TQPRR Sbjct: 85 VDTRLPIAQEAERIVALIRAHPVVIIAGETGSGKTTQLPKLCLSAGRGIAGTIGCTQPRR 144 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AAR VA R+AEEL+T G +G++VRF++ VSD + +K MTDGILLAE+ DR L YD Sbjct: 145 IAARAVATRVAEELQTPLGMVVGFQVRFTEKVSDASRIKFMTDGILLAEVASDRWLSAYD 204 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGR 252 TIIIDEAHERSLNIDFLLGYLK+LL +R DLK+I+TSATID RFS+HF++AP+I V+GR Sbjct: 205 TIIIDEAHERSLNIDFLLGYLKQLLKKRADLKVIVTSATIDTARFSKHFDDAPVIHVAGR 264 Query: 253 TYPVEVRYR---------------------------------------PIVEEADDTERD 273 TYPVEVRYR PIV + +R Sbjct: 265 TYPVEVRYRPLDAMWASDDRLGEAYGGTESLAVNRWAGGSEGDGALSKPIVALPQEDQRT 324 Query: 274 QLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQ 332 AI +DE+++E HGD+L+F+ GEREIR+ L + R TE+LPLYARLS +Q Sbjct: 325 VNDAIVAVIDEITREDPHGDVLVFLPGEREIRELYRVLERRKYRETELLPLYARLSARDQ 384 Query: 333 NRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 +RVF SGRR+VL TNVAETSLTVP I+YVIDPG AR+ RYS R K+ RL IEPISQAS Sbjct: 385 DRVFNPGSGRRLVLTTNVAETSLTVPRIRYVIDPGYARVKRYSARQKLDRLYIEPISQAS 444 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGD----- 447 ANQR GRCGR+++G+C RLYSE+DFL+R FTDPEI R++LA VIL+M LGLG Sbjct: 445 ANQRAGRCGRIADGVCYRLYSEEDFLARSAFTDPEIRRSSLAGVILRMLQLGLGRIGGSA 504 Query: 448 ------------------IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 I +F F+E PD+R + DG + L ELGA+ S + LT + Sbjct: 505 ASLSEPVSGPEQQRTSWIIESFSFLEPPDERAVADGWQQLVELGAVD-----SQHVLTAI 559 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GR++++LPVD + ARM++ A++HGCV E +I + L +QDPRERP + ++A+D H +F Sbjct: 560 GREMARLPVDVKSARMLVAARQHGCVHEMTVIAAFLGVQDPRERPPEAREAADNAHAKFA 619 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 D S+F+ + LW + + ++ + R+ C+ +L +L +REW ++ QL + Sbjct: 620 DARSEFVGILRLWEAYRQIRGHMTQSKLRQWCQRHFLGFLHMREWCELQLQLSLLC 675 >UniRef50_A2DDS9 Helicase, putative n=2 Tax=Trichomonas vaginalis RepID=A2DDS9_TRIVA Length = 740 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 225/695 (32%), Positives = 355/695 (51%), Gaps = 53/695 (7%) Query: 40 PDAQQAIFQEMAKEIDQAA----GKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 P+ Q I +++A+ + + + LPV ++K +I+EA+R+ +V Sbjct: 27 PEEAQQITEKVAQLEESGEINPYTNKPYSKNYYKILETRMKLPVYERKDEIIEAVRNSKV 86 Query: 96 VIVAGETGSGKTTQLPKICMELGR-GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 I+ G TGSGKTTQ+P+ +E I TQPRR+AA VA+R+A+E+ E G + Sbjct: 87 TIIEGSTGSGKTTQIPRFLLEANIIDPSQKIVCTQPRRVAAINVASRVADEMDIELGAEV 146 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY VRF + T + MTDG+L+ E D + +Y IIIDEAHER++N D ++G LK Sbjct: 147 GYCVRFDAKETSKTRLTYMTDGLLMREFVIDPNVTKYGIIIIDEAHERTINSDIIIGLLK 206 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNN---------APIIEVSGRTYPVEVRYRPIVE 265 L+ +R DLK+++ SAT++ +F R F+N P I V GR + V Y Sbjct: 207 RLVNKRDDLKVVVMSATLEATKFQRFFDNITDDSEPCVTPHIVVPGRLHKVVKVY----- 261 Query: 266 EADDTERDQL-QAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTE----- 319 + + L +A+ +D + GDIL+F++GE EI T D L T Sbjct: 262 -TEAAVPNYLNEAVSRTLDIHFNQPEGDILLFLTGEEEIESTCDRLRAEISGQTHSTGIS 320 Query: 320 --ILPLYARLSNSEQNRVFQS---HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRY 374 +LPLYA L EQ +VF+ + R+I+++TN+AETS+T+ G+ YVIDPG + + Y Sbjct: 321 AYVLPLYASLPPQEQAKVFKPAKYPNTRKIIVSTNIAETSVTIDGVVYVIDPGMVKQNTY 380 Query: 375 SYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNL 433 + ++ L + PIS+A+A QR GR GR GIC RLY+++ F E T PEI R++L Sbjct: 381 NPERRMSSLLVVPISKAAAVQRAGRAGRTRRGICYRLYTQETFEKELQEQTTPEIQRSDL 440 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 ASV+L M A G+ DI FPF++ P+ + ++ + L LGA+ LT GR + Sbjct: 441 ASVLLLMLAAGISDIMHFPFIDPPEYKLVKSSIEELYFLGAVDIQGN-----LTEKGRLM 495 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ-DPRERPMDKQQASDEKHRRFHDKE 552 S +P++P+LA ++ ++ C E I + LS Q P RP+ + +D HR F Sbjct: 496 SLIPIEPKLAAALISSKDFNCTVEMATIVAMLSEQGQPFMRPVKESAMADAAHRPFKCGF 555 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 SD ++ + +N + + C YLNY + QL ++++ GI Sbjct: 556 SDHISLLRCFNEFA-------KDPSKNFCNQHYLNYRMLDRAYKSRQQLLSLLRKNGIEA 608 Query: 613 NSEPAEYRE------IHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGSGLFKKPP 665 S + I ALL G+ + + ++Y+ + I P S + + P Sbjct: 609 VSIYDDKECQNPEKHIIHALLMGMFMQTCVYNPPTKQYSFMTGQKEADIHPSSSI-RSIP 667 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 W++ E V T+ + R + I+ W+ Sbjct: 668 TWLIYTEYVFTNSEFIRGCSEIEDSWIIQSCPEFF 702 >UniRef50_Q2GVT0 Putative uncharacterized protein n=2 Tax=Sordariomyceta RepID=Q2GVT0_CHAGB Length = 626 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 215/667 (32%), Positives = 341/667 (51%), Gaps = 78/667 (11%) Query: 66 AARPEITYPDNL-PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 A P + P L P+++ ++ +L I V IV G+TGSGK+TQ+P+ G G Sbjct: 9 AFIPALHKPAELLPIAKHRKSLLYLIETSPVTIVVGQTGSGKSTQIPQFLERAGWCADGK 68 Query: 125 I-GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 I G TQPRR+AA TVA R+AEE + G +GY +RF D S+ T +K +TDG+L+ E Sbjct: 69 IIGITQPRRVAATTVAIRVAEEFGCDVGKEVGYSIRFEDATSETTRIKFLTDGLLIREAL 128 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-- 241 D LL +Y I++DEAHERS++ D LLG LK++ +RPDL+III+SAT+ E F F Sbjct: 129 VDPLLSRYSVIMVDEAHERSISSDILLGLLKKIRKKRPDLRIIISSATLQAEEFRNFFSE 188 Query: 242 ------------NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQE 288 +NA I+ + GRTYP+++ Y D D L A+ +D + E Sbjct: 189 PKEETPNGKENGDNASIVSLEGRTYPIDILYL------DSPAEDYLDKAVSTVIDIHTNE 242 Query: 289 SHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 GDILI ++ + S + +S + R+++ +T Sbjct: 243 PKGDILI-----------------------------SKCTCSRK----RSENFRKVIFST 269 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N++E S+T+ GI YV+D G ++ Y +T ++ L P+S+ASA QR GR GR G C Sbjct: 270 NISEASVTIDGIVYVVDSGFVKLRAYDPKTGIESLTATPLSKASAAQRAGRAGRTKPGKC 329 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RLY+E+ + S PE PEI R+NLA +LQ+ ALG+ ++ F F+ P + G+ L Sbjct: 330 FRLYTEEAYQSLPEANIPEIQRSNLAPFVLQLKALGIDNVLRFDFLAPPPAELMVRGLEL 389 Query: 469 LEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L LGA+ KLT PLG ++++L V+P +A+ +L AQ GC+ E + I + S+ Sbjct: 390 LYSLGALDD-----YAKLTRPLGLRMAELAVEPMMAKTLLSAQSFGCLSEILTIAAMTSL 444 Query: 528 -QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 + + +++ ++ R+F +E D L +N++ + + S R C + L Sbjct: 445 GGNIWIQHEGEKKKTESAKRKFAAEEGDQLTLLNVYQAFVTKGRKES-----RFCHENLL 499 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY---------REIHIALLTGLLSHIGMK 637 N+ + I QL++ ++ G+ V+ A + +I L G +H Sbjct: 500 NFKLMARAVSIRAQLKRYLERFGLNVDESLAAHSTSTASNKAEQIQRCLTAGYFAHAARM 559 Query: 638 DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET-SRLWGRIAARIDPEWVEPVA 696 D + P S +F + +WV+ E++ET ++ + R RI+ W+ A Sbjct: 560 QPDGTFRNVSGTTVLHAHPSSIMFNRKAEWVIFHEVMETGNKTFIRDITRIEKSWLLEYA 619 Query: 697 QHLIKRT 703 K T Sbjct: 620 PEFYKTT 626 >UniRef50_Q22YX8 Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22YX8_TETTH Length = 812 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 210/657 (31%), Positives = 349/657 (53%), Gaps = 45/657 (6%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRL 133 LP+ Q KQ+IL + ++ V+V ETGSGKTT++P+ +E G I G IG +QPRR+ Sbjct: 58 KELPIVQHKQEILYCVENYSCVVVIAETGSGKTTKIPQYLVEAGYAINGKKIGVSQPRRI 117 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYD 192 AA ++ANR+A+E+ G +GY VRF D+ + T +K MTDG+L+ +I D LL +Y Sbjct: 118 AAISIANRVAQEMGCIIGQEVGYSVRFDDNCDEELTQIKYMTDGMLINQILNDPLLSEYS 177 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN---------- 242 ++ID+ HERS+N D LLG LK++ + P LK++I+SATID E S F Sbjct: 178 VLMIDDIHERSINTDILLGLLKKIRRKNPQLKLVISSATIDAESISTFFQERVTDPKTNQ 237 Query: 243 -----NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL--SQESHGDILI 295 + I+ + GR +PV++ Y +T R+ + E+ + + GDILI Sbjct: 238 VIANLTSQILYIEGRQFPVDIYYL------KETTRNYVVKAVQVTLEIIRAPDKKGDILI 291 Query: 296 FMSGEREIRDTADALNK-----LNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLAT 348 F++G+ EI + + K ++ +ILPLY+ L +Q VF+ R+I+++T Sbjct: 292 FLTGQEEIEAFIEIIQKNFIGDAERQNLKILPLYSGLPLEDQMEVFKPSESYVRKIIVST 351 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AE+S+T+ G+ YVID +I+ Y ++ + L + PIS+A+A QR GR GRV G C Sbjct: 352 NIAESSITISGVVYVIDTLFHKINYYDFKRGFENLLVVPISKAAAKQRAGRAGRVQRGEC 411 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RL ++D F+ + + PEILR +L++ ILQ+ LG+GD+ F ++ P++ + Sbjct: 412 YRLCTKDQFVQLYDNSTPEILRCDLSTFILQLKTLGVGDVTNFELLQQPNENAYAKALEQ 471 Query: 469 LEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQK--HGCVREAMIITSAL 525 L L I LT +G ++ ++ +L ++L + K GC ++ +++ S L Sbjct: 472 LFALKVID-----KYCNLTQEIGHKICDFNLETKLGVLLLNSFKDDFGCSQQMLVLCSML 526 Query: 526 SIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 S+Q D +K + KE D + +N++ + SS A + C Sbjct: 527 SLQGQVFYNGFDPATILKQKK-KLGAKEGDHITLINIFLAFNHLK---SSQARQGFCSDH 582 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 LN + I+ QL + VK +G+ VN+ + I AL+T ++ D Sbjct: 583 KLNIKSLNMAVKIHDQLCKQVKRMGLKVNNSEDDIEGILRALVTAFFMNVAQLQPDGSYR 642 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + P S L P+WV+ +E+V +++ + R + +DP+W+ +A H + Sbjct: 643 NLRNKEILYLHPTSILNINFPQWVIYSEVVFSTKYYMREVSEVDPKWLLELASHYFE 699 >UniRef50_Q4QAM3 Pre-mRNA splicing factor, putative n=6 Tax=Trypanosomatidae RepID=Q4QAM3_LEIMA Length = 1138 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 212/688 (30%), Positives = 361/688 (52%), Gaps = 41/688 (5%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 SRR +++ + ++A + +A + D+ + +R ++LP+ K ++L Sbjct: 386 SRRQRKDEQLARIEGRKAQMETLADDADEVERRDAMRRQR-------ESLPIHHCKDELL 438 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI-GHTQPRRLAARTVANRIAEEL 146 + + V +V GETGSGKTTQL + + G G I G TQPRRLAA VA R+++E+ Sbjct: 439 RYVGESAVTVVVGETGSGKTTQLVQYLYQRGYARHGKIIGCTQPRRLAAIGVARRVSDEM 498 Query: 147 KTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNI 206 G +GY + D + +T VK MTDG+LL E D L +Y +++DEAHERS++ Sbjct: 499 GCALGTTVGYSIHLDDTTTADTRVKFMTDGVLLRETVNDPSLDKYSVVMLDEAHERSVDT 558 Query: 207 DFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEE 266 D L+G LK L RR DLK+I+TSAT+D +FS F NAP E+ G+T+PV++ Y Sbjct: 559 DVLMGVLKLALRRRGDLKLIVTSATMDVRKFSAFFGNAPCYEIPGQTFPVKIHYS--ATP 616 Query: 267 ADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA----LNKLNLRHTEILP 322 D + + + ++ E+ DIL+FM+G ++ T + L +L+ +H L Sbjct: 617 VADYVAEAVFRVCQLHLQMPLEAKHDILVFMTGREDVYGTCELIRRRLTELSPQHLSTLL 676 Query: 323 LYARLSNSEQNR-----VFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 + + LS + R V + R++V+ATNVAETSLT+ G++YV+D G + + Y Sbjct: 677 IISCLSEAAPARSTEIGVLEATPAGLRKVVVATNVAETSLTIDGVRYVVDCGFMKTNVYR 736 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLA 434 + L P SQA ANQRKGR GR +EG C RLY+E + + PEI R+++ Sbjct: 737 PSIGMNTLQRYPTSQAQANQRKGRAGRTTEGTCYRLYTEVQYAEEMLPNSVPEIQRSSVD 796 Query: 435 SVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLS 494 SV+L + ++G+ + F F++AP N++ + L LG + A +T G+Q Sbjct: 797 SVVLLLKSIGVHRLRDFEFMDAPPAANVRSSMFHLWVLGFLDD-----AGAITAPGQQAL 851 Query: 495 QLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ--DPRERPMDKQQASDEKHRRFHDKE 552 + P+ P LA+++LE+ GC E I + +S + E P +++ + + H RF+ + Sbjct: 852 EFPMSPVLAKLLLESATMGCALEMARIVAMISADPKNLFELPKGREKVAQQHHSRFYAND 911 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 SD L ++++ L R+ + +L+ + D++ QL + +++L +P+ Sbjct: 912 SDHLTLLHVFTQY------LDHGRSRQWAQDHFLHAPTLARAHDVFAQLIEKLRKLHLPI 965 Query: 613 NSEP-AEYREIHIALLTGLLSHIGMKDADK-QEYTGARNA--RFSIFPGSGLFKKP--PK 666 S AE ++ L + + + EY NA ++ P S + + P Sbjct: 966 QSCGHAETDKVRHCLAKAFVLQAARRSDRRWTEYRPLLNAGVACAVHPASAVHARSEMPP 1025 Query: 667 WVMVAELVETSRLWGRIAARIDPEWVEP 694 +++ +L+ T + + + ++PEW+ Sbjct: 1026 YIIYNDLLLTHKEYLVMVTAVEPEWLVE 1053 >UniRef50_A8XFV1 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8XFV1_CAEBR Length = 859 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 216/698 (30%), Positives = 356/698 (51%), Gaps = 45/698 (6%) Query: 43 QQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET 102 + + + + K RE A E LP+ +Q ++ + + +IV GET Sbjct: 124 SKKPNAAIPSKNAEPKAKNSPREDATYEKFIRPQLPIDVVEQQLMHELASQETLIVIGET 183 Query: 103 GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSD 162 GSGK+TQ+P++C+ G KGLI T+PRR+AA ++A+R+A E+ T+ GG +GY VRF + Sbjct: 184 GSGKSTQVPQLCVRAGIAEKGLIAVTEPRRVAAVSLASRVAVEMGTDLGGTVGYHVRFEN 243 Query: 163 HVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR-- 220 S T ++ MTDGI+L + LL +Y T+IIDEAHERSL+ D L+ L++ +R Sbjct: 244 VTSHRTKIEYMTDGIVLRKALVSPLLDKYSTVIIDEAHERSLHSDVLMCILRKCQAQRRS 303 Query: 221 --PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAI 278 L++II SAT+ ++F +F+NA ++ VSGRT+P+E+ + + D + Sbjct: 304 TDNPLRLIIMSATLQADKFQAYFDNAKVVLVSGRTFPIEIHHVNPKINKSFSATDYVYNT 363 Query: 279 FDAVDELS-QESHG-DILIFMSGEREIRDTADALNKLN---LRHTEI---LPLYARLSNS 330 V + E G DIL+F++G EI A L +LN R + +PLYA L Sbjct: 364 VICVKHVHLTEPKGHDILVFLTGSEEIEAVAHQLAELNGSLPREADFILPVPLYAALRPE 423 Query: 331 EQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 +Q FQ R+++++TN+AETS+T+PGI+ VID G + R+ ++ L + + Sbjct: 424 KQREAFQKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEASNRIDVLKVHNV 483 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 S+A A QR GR GR + G C RLY+ +DF PEILR NL++ L++ LG+ + Sbjct: 484 SKAQAKQRAGRAGRDAPGKCYRLYTREDFQKFDAENMPEILRCNLSATFLELMKLGMKNP 543 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITT-DEQASAYKLTPLGRQLSQLPVDPRLA---- 503 +++ P+ +NI + L LGAI + S + LT +G P+ P A Sbjct: 544 HRLGWIDPPESQNIDAALLELTSLGAIRPINSDRSKFVLTEMGDVFCMYPLSPEHARKLK 603 Query: 504 --RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS--DEKHRRFHDKESDFLAFV 559 R++ +AQK GC+ EA+ I +A+ D + + + R+F +E D + + Sbjct: 604 VFRILFQAQKEGCIMEAIKIVAAMQTDALFSGGSDSKSDAEVERVRRKFETREGDHITLL 663 Query: 560 NL--------------------WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 + +N + + + A R+ C + +N ++ I Sbjct: 664 KIVLTTNDFFDQLNAKTEADARYNKSNKSLEREYNEAIRKFCNDNMINEQHLKTGSMIED 723 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN--ARFSIFPG 657 QL+Q+ E + ++ A+ +I A+ GL + D + Y N I P Sbjct: 724 QLKQIAIEQNVKFSTCGADLSKIRKAIAVGLFLNSCEYDRQEDRYRLMINPAITVKIHPS 783 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 S L + P +++ +EL++T+ L+ ID +WV P+ Sbjct: 784 SALSRSKPAYIVFSELMKTNDLYALQVTLIDADWVRPL 821 >UniRef50_O01598 Putative uncharacterized protein T05E8.3 n=1 Tax=Caenorhabditis elegans RepID=O01598_CAEEL Length = 856 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 216/677 (31%), Positives = 347/677 (51%), Gaps = 47/677 (6%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 LP+ +Q ++ + + +IV GETGSGK+TQ+P++C+ G G I TQPRR+ Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA ++A+R+A E+ T GG +GY VRF + T ++ MTDGI+L + LL +Y Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPD----LKIIITSATIDPERFSRHFNNAPIIEV 249 +IIDEAHERSL+ D L+ L++ +R + L++II SAT+ E+F +FNNA ++ V Sbjct: 278 VIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLV 337 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVD--ELSQESHGDILIFMSGEREIRDTA 307 +GRT+P+EV + + D + V L++ DIL+F++G EI A Sbjct: 338 AGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVA 397 Query: 308 DALNKLN---LRHTEIL---PLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPG 359 L +LN ++L PLYA L +Q F+ R+++++TN+AETS+T+PG Sbjct: 398 SQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPG 457 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I+ VID G + R+ ++ L + +S+A A QR GR GR + G C RLYS +DF Sbjct: 458 IRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHK 517 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT-D 478 PEILR NL++ L++ LG+ + ++ P+ NI + L LGAI + Sbjct: 518 FEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRPVN 577 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 S + LT +G P+ P AR++ +AQK GC+ EA+ I +A+ D + Sbjct: 578 SDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSK 637 Query: 539 QAS--DEKHRRFHDKESDFLAFVNLW----NYLGEQQKALSSNA---------------- 576 + D RRF +E D + + L + + K S+A Sbjct: 638 SDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGKANKSLEREYNQT 697 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 R+ C + +N ++ I QL+Q+ E + ++ A++ ++ AL G+ + Sbjct: 698 IRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCE 757 Query: 637 KDADKQEYTGARN--ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 D + Y N I P S L + P +++ +EL++T+ L+ ID +WV P Sbjct: 758 YDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWVRP 817 Query: 695 V--------AQHLIKRT 703 + A HL + T Sbjct: 818 LISDHKKMRANHLAETT 834 >UniRef50_A2F2U1 Putative uncharacterized protein n=2 Tax=Trichomonas vaginalis RepID=A2F2U1_TRIVA Length = 706 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 216/667 (32%), Positives = 353/667 (52%), Gaps = 41/667 (6%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 E + + LPV + + +I+ AIRD+ +VI+ G+TGSGKTTQ+P+ +E G Sbjct: 24 SETYKEILETRKKLPVYEHRMEIIAAIRDNPIVIIEGQTGSGKTTQIPQFVLEEALSPYG 83 Query: 124 L-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 I TQPRR+AA ++A R+A+E+ + G +GY VR+ D+VS+NT + MTDG+L+ E Sbjct: 84 KKIVCTQPRRVAAISIATRVAQEMDVKLGDVVGYSVRYDDYVSENTKLVYMTDGLLMREF 143 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 D + +Y +IIDEAHER++N D ++G LK + RPDLKIII SAT+D +F + + Sbjct: 144 ISDPKISKYGVVIIDEAHERTVNTDIIIGILKLIGNVRPDLKIIIMSATLDAGKFVQFYT 203 Query: 243 ----NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMS 298 P +++ GR + VEV ++P + + + T A+ ++ L +ES GDILIFM+ Sbjct: 204 HGDITPPHLKIPGRQFNVEVFHQPQMVQNEITA-----AVNKCMEILEKESSGDILIFMT 258 Query: 299 GEREIRDTADALNKLNLR--------HTEILPLYARLSNSEQNRVFQS--HSGRRIVLAT 348 GE EI L R + PLYA L EQ +VF R++V++T Sbjct: 259 GEDEIERACSILRDRISRTRVTGSVVDALVFPLYAALPPGEQAKVFNKLSAGTRKVVVST 318 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETS+T+ G+ YVID G + S YS ++ + L IS+A+ANQRKGR GR +G C Sbjct: 319 NIAETSVTIDGVVYVIDCGYVKQSGYSPSSRKRSLNRVYISKAAANQRKGRAGRTCDGFC 378 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 R+Y+++ + E + PEI R++L SVIL M A + DI FPF++ P + + + Sbjct: 379 YRMYTQEQYEMMEEQSVPEIQRSDLCSVILLMLAAHISDIVHFPFLDHPHYKLLVGALEE 438 Query: 469 LEELGAITTD----EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 L L + + L+ G+ ++ LP++P+ A+ +L + ++G R+ + I + Sbjct: 439 LYHLDTFLPHSPLPQNSLPEVLSTEGKLMAGLPIEPKYAKALLSSYEYGNSRDIIAIVAI 498 Query: 525 LSIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 LS Q P +K++ +D H+ F +++ D L + ++ Q N + Sbjct: 499 LSEQGQIFLHPRNKKKEADIAHKPFINEKGDHLTLLQVYKEYIRQ-----GNKGTSWAIS 553 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSE-----PAEYREIHIALLTGLLSHIGMKD 638 ++ N+ + + QL +++K N + P + +ALL G ++ Sbjct: 554 NFFNHRSLENARKAAKQLERLLKNFNRYRNEDEDFNAPVNEEKFFLALLKGSFMNVAKLG 613 Query: 639 ADKQE--YTGARNARFSIFPGS---GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 ++ TG + I + LF+ KWV+ E V+T + R + I+P W+ Sbjct: 614 EHEKYQVVTGRGQQKAEIKFSALETSLFEDK-KWVIFDEFVQTDHDYLRTVSVINPNWLC 672 Query: 694 PVAQHLI 700 A Sbjct: 673 IAAPTFY 679 >UniRef50_D0A429 Pre-mRNA splicing factor ATP-dependent RNA helicase, putative n=2 Tax=Trypanosoma brucei RepID=D0A429_TRYBG Length = 754 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 215/697 (30%), Positives = 346/697 (49%), Gaps = 86/697 (12%) Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL--GRGIK 122 RP++ LPV++ + I+ IR H V++ GETGSGKTTQ+P+ + +G Sbjct: 68 NERRPQVH----LPVTEARAAIVRMIRRHNAVVIVGETGSGKTTQIPQYVWDDIVSKGDG 123 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 G++G TQPRR+AA ++A +A++ + GG + Y VRF D + NT +K MTDGILL EI Sbjct: 124 GIVGCTQPRRVAAVSIARHVAQQRGGKVGGEVAYAVRFDDTCTKNTKIKFMTDGILLREI 183 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHF 241 Q D L Y +I+DEAHER+L+ D L G LK++ RR + L I+I SAT++ E FS+ + Sbjct: 184 QTDPDLTHYRCLILDEAHERTLHGDVLFGLLKDIARRRKNTLSIVIMSATLNEEHFSKFW 243 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGE 300 +AP+ + GRT+PV + + + + D ++A A+ ++ Q E GD+L F++G Sbjct: 244 WDAPVGVIHGRTFPVTIYH------TVEPQADYVEAAVSALLQIHQREEPGDVLCFLTGR 297 Query: 301 REIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAE 352 EI D L + ++ +LPLY+ + +Q VF R+I++ATN+AE Sbjct: 298 EEIEDAKRMLEQRMKLLPNDIGDFVVLPLYSAMPYEQQLVVFDPAPPGKRKIIIATNIAE 357 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TS+TV GIKYV+D G + Y+ +T ++ L +S+A A QR GR GRV+ G C RLY Sbjct: 358 TSITVEGIKYVVDSGVVKAKHYNSKTGMEVLAEVDVSRAQATQRAGRAGRVAAGKCFRLY 417 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 + F S E T PEI R +L SV+LQM +L + IA F F++AP+ + L L Sbjct: 418 TAQAFESLHENTVPEIQRCSLISVVLQMKSLNIDRIADFEFMDAPNPHALTKAEETLMLL 477 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 A+ ++ +TPLG++L+ P++P A ++L + G REA+I + S ++ Sbjct: 478 NALDSEG-----CVTPLGKRLTDFPIEPAAAMVLLAGKALGVEREAVIAIAMTSTENLFV 532 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 D ++ +D F D V+++ K + + C T+ ++Y ++ Sbjct: 533 TSRDIKERADRCKGAFAKSAGDHATLVSIYQAFKHSPK----DQRKLWCETNAISYRQML 588 Query: 593 EWQDIYTQLRQVVKE--------------------LGIPVNSEPA--------------- 617 + QD+ TQL ++ E S Sbjct: 589 KVQDVITQLMAILAEGDDEELLATLVPKSVRQALSHKATDESCAVVSGSNDDNTVTNGYD 648 Query: 618 -----------------EYREIHIALLTGLLSHIGMKDAD-KQEYTGARNARFSIFPGSG 659 ++ + AL G ++ +A T I P S Sbjct: 649 HQWEPGANGRSSGLKFRDFELLRRALCCGYFLNVAFYNAKIGNFQTVVGQQVVHIHPSSV 708 Query: 660 LF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 LF ++ P V+ +V T+R + + + + W+ Sbjct: 709 LFTLRRKPALVLFNSVVRTTRRYMQNVSVVQEAWLRE 745 >UniRef50_C8PMN0 ATP-dependent RNA helicase HrpA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMN0_9SPIO Length = 898 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 240/638 (37%), Positives = 364/638 (57%), Gaps = 23/638 (3%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LPV ++K ILE++ HQV++V TGSGKTTQLP I E G G+IG TQPRR+AA Sbjct: 6 QLPVYEQKARILESLERHQVIVVESPTGSGKTTQLPVILHEAGYTQTGIIGVTQPRRIAA 65 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +V+ IA +L+ G +GYK+RF DH S +T +K+MTDGILL E++ D L +Y I+ Sbjct: 66 LSVSEFIANQLRVPLGELVGYKMRFEDHTSPDTKIKIMTDGILLQELKLDPWLSKYSVIM 125 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHERSLNIDF+LG LK +L R D K+II+SATI+ + FS +FN P+I++ TYP Sbjct: 126 VDEAHERSLNIDFILGLLKRILQERQDFKVIISSATINTDMFSMYFNECPVIKIDAMTYP 185 Query: 256 VEVRYRPIV----EEADDTERDQLQAIFDAVDELSQES-HGDILIFMSGEREIRDTADAL 310 V + + P E E L I V + E G IL+F+ GER I+D + L Sbjct: 186 VTLIFDPPALTASTETLAAETALLDKIAVIVGRILSEGRPGAILVFLPGERAIKDCIERL 245 Query: 311 NKLN-LRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPG 367 + R LPLY RLS EQ RVF+S ++IV+ATN+AETS+T+ I VID G Sbjct: 246 SHEPWFRKLYPLPLYGRLSKEEQERVFKSPPFGKKKIVIATNIAETSITINDIAAVIDSG 305 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427 ++++ Y+ T L P+S+AS NQR+GR GR EG+C RLY+ DF +R +T E Sbjct: 306 LSKLNFYNPFTYTSSLDEAPVSKASCNQRRGRAGRTQEGVCYRLYTRKDFETRVMYTTEE 365 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 I RT+L+ V+++M LG+ D A F F+ P K+ I V L LGA+ +D L+ Sbjct: 366 IYRTDLSEVVMRMAELGIYDFANFDFISPPGKKGIIGAVDTLNMLGALESDN-----SLS 420 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKH--GCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 +G+ + P+ PR +RM++EA + + + +I LS + P P ++ + + H Sbjct: 421 KIGQMMCLFPLSPRQSRMIVEAVLYYPESIEDVLIAAGFLSARSPFLFPDGQELEARKAH 480 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 F D DF++F+ ++ + + +R C YL+ + E +I QL +V Sbjct: 481 AAFRDPLGDFVSFLKVYRQYMQAENQ------KRFCERSYLDERIMAEIANIKEQLELIV 534 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 ++G+P+ S + + A+ G++ + + Y + SI PGS ++K+ P Sbjct: 535 SDMGVPILS-GGKPSDYLTAVARGMIQFVCAAQ-GRDVYRSLTTEKISIHPGSCMYKERP 592 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 +++ E+V TSR++ + + + V VA L+ + Sbjct: 593 SYIVAGEIVHTSRMYAMSVSPLSKDIVALVAPALLGKK 630 >UniRef50_B5RU49 DEHA2E21340p n=4 Tax=Saccharomycetales RepID=B5RU49_DEBHA Length = 841 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 219/701 (31%), Positives = 352/701 (50%), Gaps = 68/701 (9%) Query: 55 DQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC 114 + L + A LP+ Q K +IL + +QV ++ GETGSGK+TQ+P+ Sbjct: 145 SKDLSNSQLSKKASDLYEVRQKLPIFQHKDEILRYVNKNQVTVIIGETGSGKSTQIPQFL 204 Query: 115 MELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD-NTMVKLM 173 M + I TQPRR+AA ++A R++EE G +GY+VRFS+ T +K + Sbjct: 205 M---PTNRKQIAVTQPRRVAAASLAARVSEEYGCRLGQEVGYQVRFSNVTHPHKTKLKYL 261 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSAT 231 TDG+LL EI D L +Y TIIIDEAHER++ D ++G+LKEL+ +R DLKIII SAT Sbjct: 262 TDGMLLREIMLDGNLNKYSTIIIDEAHERTILTDLIMGFLKELIVSKKRADLKIIIMSAT 321 Query: 232 IDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG 291 ++ E FS+ F+ API+ V G+ YPV Y AD TE + V E G Sbjct: 322 LNAELFSKFFDQAPILFVEGKMYPVSKHYL-----ADSTEDIADTMVRSIVQVNMSEQEG 376 Query: 292 DILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQ--SHSGRR 343 DIL F+ G+ EI + L ++ LPLYA LS ++Q+++F+ R+ Sbjct: 377 DILCFLPGQEEIDSCVNILQQVAPQLPREAPLIVALPLYAALSPAQQSKIFEKLPGRKRK 436 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 ++LATN+AETS+TV G+KYVID G ++ + ++ + L PISQASA QR GR GR Sbjct: 437 VILATNIAETSITVSGVKYVIDSGLRKVKVWKHQLGLSTLLTTPISQASAKQRAGRAGRE 496 Query: 404 SEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 S G RLYSE F P+ + EI+R ++ IL + +G+ D+ + ++E P + I Sbjct: 497 SPGKVFRLYSEKTFFNQLPKQQESEIMRNDIVLPILTLKKIGVDDLLNWTWLEHPGQEAI 556 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 + L LGA+ + K+T LG ++S LP+ P+L+ ++L A G + + I Sbjct: 557 LSALTTLYSLGALDD-----SGKITKLGYKMSVLPLPPQLSVVLLSALDFGVLSSVIDIV 611 Query: 523 SALSIQDPRER----PMDKQQASDEKHRRFH---DKESDFLAFVNLWNYLGEQQKALSSN 575 + +S+ + + + + K R + K+ D +A ++Y E +++ Sbjct: 612 ACISVDNLILNVGSGNGEIRDEINFKRRNYCPLGCKQGDLIAVKEFFSYYKELIDNGNTS 671 Query: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVV-------------------KELGIPVNSE- 615 + C+ + +Y + + QL+ + + + + +++E Sbjct: 672 EAKAWCKELHFSYKGFKNVMRVRNQLKDYMMATVRQDDTLKQHERDQQLRNIKLQLDAES 731 Query: 616 ---------------PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 P + I + L G +++ + D+ T SI P S L Sbjct: 732 LLDDDSDADTGVSKQPLDIPAILKSFLKGYITNTAIGMPDRSYRTCTTGQLISIHPSSTL 791 Query: 661 FKKPP-KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 F K +M E V T++ +GR + I+ W++ +A L+ Sbjct: 792 FGKANLDAIMYIEYVYTAKGYGRNCSVIELGWLQEIAPQLL 832 >UniRef50_B6K8E7 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K8E7_SCHJY Length = 1082 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 206/685 (30%), Positives = 330/685 (48%), Gaps = 110/685 (16%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI------------TYPDNLPV 79 + + ++ Q + AKE+ A R ++P ++LPV Sbjct: 455 DSMARPEDRKFAQDVQTAAAKEVASALPS--WRNDSKPAFVSYGKRTMLSINEQRESLPV 512 Query: 80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-KGLIGHTQPRRLAARTV 138 + +Q LEA+ +QV+++ GETGSGKTTQ+ + E G I TQPRR+AA +V Sbjct: 513 YKLRQQFLEAVASNQVLVLLGETGSGKTTQITQYLAEEGYTRGSKKIACTQPRRVAAMSV 572 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 A R+AEE+ G +GY +RF D S+ T +K MTDG+L E D LL QY +I+DE Sbjct: 573 AKRVAEEVGCRVGEEVGYTIRFEDRTSNLTRIKYMTDGMLQRECLVDPLLHQYSVVILDE 632 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258 AHER++ D L G LK + +R DLK+I+TSAT+D ERFS +F+ PI + GR+YPVE+ Sbjct: 633 AHERTVATDVLFGLLKSAVLKRKDLKLIVTSATLDAERFSSYFHKCPIFTIPGRSYPVEI 692 Query: 259 RYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLNLRH 317 Y + E D L A V ++ E GDIL+F++G+ EI + + L++ Sbjct: 693 LY------TKEPEPDYLDAALLTVLQIHLTEGPGDILVFLTGQEEIDTSCEILHER---- 742 Query: 318 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 Q R +GR T PG Y + +A +R Sbjct: 743 -------------AQARQRSGRAGR-------------TGPGKCYRLYTESA------FR 770 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 ++ + PI PEI R NL+ I Sbjct: 771 NEM---LVSPI-------------------------------------PEIQRQNLSHTI 790 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 L + A+G+ D+ F F++ P + + + L L A+ D LTPLGR+++ P Sbjct: 791 LMLKAMGINDLLNFDFMDPPPAQTMIAALENLYALSALDDDGL-----LTPLGRKMADFP 845 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 ++P+L++++L++ ++GC E + I + LS+ + RP +KQQ +D +F + ESD L Sbjct: 846 MEPQLSKVLLKSVEYGCSDEILSIIAMLSVPNIWSRPREKQQEADRHRAQFSNPESDHLT 905 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA 617 +N++ S+ C +Y+ +R +D+ QL +++ P+ S Sbjct: 906 LLNVYFAW------KSNRCSDSWCYDNYIQARGMRRAEDVRNQLARLMDRHKHPIISCGR 959 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFPGSGLFKKPPKWVMVAELVET 676 I AL +G +++ +D+ + Y T NA + P LF KP +WV+ EL++T Sbjct: 960 NRESILKALCSGHFTNVAKRDSREGCYKTLVENAPVFMHPSGVLFGKPAEWVIYHELIQT 1019 Query: 677 SRLWGRIAARIDPEWVEPVAQHLIK 701 S+ + + I+P W+ VA + K Sbjct: 1020 SKEYMHTVSTINPRWLTEVAPNFYK 1044 >UniRef50_C4Y8X8 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y8X8_CLAL4 Length = 881 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 217/705 (30%), Positives = 363/705 (51%), Gaps = 71/705 (10%) Query: 53 EIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPK 112 +I+ K+ + A+ + +NLP+ Q K I++ + ++QV ++ GETGSGK+TQ+P+ Sbjct: 182 KINSGVSKLERSQKAKELLKVRENLPIYQHKDKIIDYVTNNQVTVIIGETGSGKSTQIPQ 241 Query: 113 ICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKL 172 M L K + TQPRR+AA ++A R++EE G +GY+VRFS+ S T + Sbjct: 242 FLMPLN---KKRVAVTQPRRVAAASLAARVSEEYGCVLGEEVGYQVRFSNITSSKTQLNY 298 Query: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSA 230 +TDG+L+ E+ D L +Y TIIIDEAHER++ D +LG+LK+L+ +R DLKII+ SA Sbjct: 299 LTDGMLIRELMLDPKLSKYSTIIIDEAHERTVLTDLILGFLKQLISSRQRTDLKIIVMSA 358 Query: 231 TIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ES 289 T++ E FS+ F+ API+ V G+ YPV Y E D + + A+ +++ E Sbjct: 359 TLNAELFSKFFDYAPILFVEGKMYPVSRHYLSESSE------DVVDTMVKAIVQVNMSEQ 412 Query: 290 HGDILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQSHSGRR 343 GDIL F+ G+ EI + L+ L LPLYA LS +Q+++F+ SGR+ Sbjct: 413 EGDILCFLPGQEEIDNCVTILSTLAPQLPKEAPLIVPLPLYAALSPGQQSKIFEKLSGRK 472 Query: 344 --IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 +++ATN+AETS+TV G+K+VID G ++ + ++ + L PISQASA QR GR G Sbjct: 473 RKVIIATNIAETSITVSGVKFVIDSGLRKVKVWKHQLGLSTLLTTPISQASAKQRAGRAG 532 Query: 402 RVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 R S G RL+ E+ F S P+ + EI+R ++ IL + +G+ D+ + ++E P + Sbjct: 533 RESAGKVFRLFPENVFHSKLPKQQESEIMRNDVILPILTLKKMGVDDLLNWTWLEHPGQE 592 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 I + L LGA+ + K+TPLG +++ LP+ P L+ +++ A +G +++ + Sbjct: 593 AIISALNTLYSLGALDD-----SGKVTPLGYKMAILPLPPALSAVLIGASDYGVLQDVID 647 Query: 521 ITSALSIQDPRER---PMDKQQASDEKHRRFH---DKESDFLAFVNLWNYLGEQQKALSS 574 I S LS+ + + + + K R++ + D +A + Y + + + Sbjct: 648 IVSCLSVDNLVLNIGGNGELRDEINYKRRQYCPLGNTSGDLIALKEYFTYFEKLHREKNI 707 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-----KELGIPVNSEPA------------ 617 + + C+ + +Y + QL + + + N + A Sbjct: 708 SELKMWCKDLFFSYRGFINVLKVRRQLTDYMITTIKSDDSLNQNEKDAQLKKMKAQLALQ 767 Query: 618 ---------------------EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + I + L G + + D+ T A SI P Sbjct: 768 SSNTESSGEEEENFLDLKQSLDIPSILKSFLKGYALNTAIGMPDRSFRTCATGQLISIHP 827 Query: 657 GSGLFKKPP-KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 S LF K +M E V T++ +GR + I+ W++ VA H++ Sbjct: 828 SSNLFGKSNLDAIMYIEYVYTAKSYGRNCSSIELSWLQEVAPHIL 872 >UniRef50_A7AU05 Helicase associated domain containing protein n=2 Tax=Piroplasmida RepID=A7AU05_BABBO Length = 668 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 206/672 (30%), Positives = 342/672 (50%), Gaps = 66/672 (9%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 + P+ K +IL ++ QV+++ GETGSGK+T LPKI E G G I TQPRR+AA Sbjct: 6 DFPIWFHKDEILSKLKTSQVLVLTGETGSGKSTLLPKILYENGYGDS-TIVVTQPRRVAA 64 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A +A T+ G +GY VRFS+ S+ T +K +TDG+L E+ D++ +Y ++ Sbjct: 65 ISLARHVASLFNTDLGRLVGYAVRFSNCYSEETRIKYVTDGVLFQEVLDDQIFSRYSVVV 124 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 IDEAHERS+ D LLG L+ + RR DLK++I SAT+ FS F A ++ V GRTYP Sbjct: 125 IDEAHERSIRTDVLLGILRTSIKRRLDLKVVIMSATLKSITFSSFFEGAAVVRVPGRTYP 184 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK-- 312 +++ Y P +E D L+A V +++ GDIL+F+ G+ +I + +++ Sbjct: 185 LDIYYTPQPQE------DYLEAAMLTVLQINFTYKKGDILVFLPGQDDIETLENMISEKV 238 Query: 313 ---------------------------------LNLRHT---EILPLYARLSNSEQNRVF 336 +L+H +I+PLYA L +Q++VF Sbjct: 239 EAVKEFIKSTGDQINGKLSKIKKYTEVLLGDTPYDLKHWMELQIVPLYAALPLEQQSKVF 298 Query: 337 Q--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 Q R++VLATN+AETS+T+PGI++V+D G + +S + + L ++ IS+ SA+ Sbjct: 299 QVPGDGCRKVVLATNIAETSVTIPGIRFVVDSGLVKQKLFSVKKCFESLVLQKISKDSAH 358 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GR GR+ G RLY+ + F S PEI TN+A + L++ +G+ + FP + Sbjct: 359 QRAGRAGRMGPGKVFRLYTSEAFNSMRLCRIPEIQCTNVAHIYLELKMIGVHNPLEFPLI 418 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 +AP K + L L A+ + LT +G ++ ++P+ PR AR++L + + C Sbjct: 419 DAPSKNALLSAAMELYRLDALD-----TKTNLTDIGMKMGRIPLLPRHARLLLLSLEFKC 473 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 E + I + LS ++ S + + +K D L+ +N++N + Sbjct: 474 TSEILTIVAMLSTDMTLFTSERHEKESAKMRKNIINKSGDHLSLLNMYNIWNDSPNK--- 530 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE----LGIPVNSEPAEYREIHIALLTGL 630 + CR N + +I QL +V+ + + +P + +E+ + L Sbjct: 531 ---KECCRQFGFNPGAFKRAAEIRNQLVEVLTKRIGVMNVPSCKDSSEWDTVLKCLCRAN 587 Query: 631 LSHIGMKDADKQEYTG-ARNARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARI 687 ++ D D + Y +N + I P S LF + P V+ E T +++ + + I Sbjct: 588 WMNLASLDTDGKSYKLEVQNTKVMIHPHSVLFTRRPCPPLVIFDECSSTKKVYIQNVSEI 647 Query: 688 DPEWVEPVAQHL 699 EWV + +L Sbjct: 648 SHEWVAQLLPNL 659 >UniRef50_A8PRC9 DEAH, putative n=1 Tax=Brugia malayi RepID=A8PRC9_BRUMA Length = 681 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 215/663 (32%), Positives = 333/663 (50%), Gaps = 26/663 (3%) Query: 52 KEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLP 111 K Q A + A+ + LPV + E IR + + ++ GETGSGK+TQ+P Sbjct: 4 KRYKQNACNIDQCPVAKKKFR-RKELPVDGVHLQLAEVIRQNGISVIVGETGSGKSTQIP 62 Query: 112 KICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVK 171 +IC G GL+ TQPRR+AA T+A R+A E+ G + YKVRF + SD T + Sbjct: 63 QICYNEGLIGSGLLAVTQPRRVAAITLAKRVALEMNANLGEVVAYKVRFENTTSDETKIV 122 Query: 172 LMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR----PDLK--- 224 TDGI L E D LL Y +I+DEAHERS++ D LL LK +R LK Sbjct: 123 YGTDGIFLRETFYDSLLTPYSIVIVDEAHERSVHTDILLYLLKLCYKQRLGTSNPLKLRF 182 Query: 225 --IIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAV 282 ++I SAT++ FS +F+NAP+ V GRTYPVE+ Y +++ DD D + + V Sbjct: 183 LLVVIMSATLETNVFSEYFDNAPVYIVQGRTYPVEIFYANSLDKKDD---DYVFNVLTTV 239 Query: 283 DELSQESH--GDILIFMSGEREIRDTADALN---KLNLRHTEILPLYARLSNSEQNRVFQ 337 ++ + D+L F++G+ EI + +L LPLYA L S Q RVF+ Sbjct: 240 LQIHRTEPLSSDVLAFLTGQEEIETACKKVQEASRLLPGDLVALPLYAGLPPSAQMRVFE 299 Query: 338 SHS---GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 R+++ ATN+AETS+T+PG++ ++D G ++ + + L +E ISQ SA Sbjct: 300 PAGIPHTRKVIFATNIAETSITIPGVRIIVDSGKIKVKTFLPDRHIDILRVENISQCSAT 359 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GR GR + G C RLYSE F S + T PEILR+NL+ V+L++ +GL I + + Sbjct: 360 QRAGRAGREAPGKCYRLYSEKHFHSLSKITVPEILRSNLSVVLLELLRIGLRRIKSLALI 419 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 P K ++ + L L A+ ++ KLT +G +LS PVDP AR ++ A ++GC Sbjct: 420 SNPKKEGLEAAEKHLRLLDAVKQPDEKGRLKLTEMGTRLSSFPVDPAFARALIAASQNGC 479 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 + E + I + +SI + ++ R+F E D +N++ +K Sbjct: 480 LEEVLTIVAFMSIDSVFVSSAVGHERTNLSKRKFEAPEGDHCTLLNVYRGYRLARKE--- 536 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 C ++++ + I QLR + + + S + + L GL + Sbjct: 537 KKLEEWCEANHVHQRLLNTVFKIRRQLRDICLKNSLIFRSCGTDTDRLRKTLCQGLFMNA 596 Query: 635 GMKDADKQEY--TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + + + Y + I P S L + P + +LV T+ L+ R ID EW Sbjct: 597 CVYERSQDRYSLLISPGTSLKIHPSSCLSRSRPTAFIFTDLVRTNELYARDITVIDLEWA 656 Query: 693 EPV 695 + + Sbjct: 657 KEL 659 >UniRef50_Q4Q2X4 ATP-dependent RNA helicase-like protein n=3 Tax=Leishmania RepID=Q4Q2X4_LEIMA Length = 805 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 230/699 (32%), Positives = 352/699 (50%), Gaps = 79/699 (11%) Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + R + LPV +K+ I E +R + V ++ GETGSGKTTQ+P EL Sbjct: 84 RQPFSARYRQLLQSRQRLPVFEKRHLIQETVRTNAVTLLVGETGSGKTTQVPHFLAELQD 143 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 G+I TQPRR+AA +VA R+AEE+ G +GY VRF D T V MTDG+LL Sbjct: 144 AFTGVIACTQPRRIAAISVATRVAEEMDVPLGAHVGYHVRFDSRQCDATRVLYMTDGMLL 203 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 E D L +Y +++DEAHER+++ D +LG LK LL RRP ++++ SAT+D + Sbjct: 204 REAFTDSDLQKYSVVVVDEAHERTIDTDVVLGLLKRLLTRRPLFRLVVMSATLDVAKIQS 263 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMS 298 +F AP++ VSGR + V+V Y P RD ++A V +L +E GDIL F++ Sbjct: 264 YFPGAPLVHVSGRMHDVDVLYMP------HPVRDYVEATVSCVLQLHEREPAGDILCFLT 317 Query: 299 GEREIRDTADALNKL----------------------------------NLRHTEILPLY 324 GE EI AL++ ++PLY Sbjct: 318 GEAEIERAVAALHQALGSSSAAASKEQNAPTQGPGKGLTVLNTPADDLARPTEVVVVPLY 377 Query: 325 ARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 LS EQ +VF + R++V+ATN+AETS+T+ GI YV+D G + S Y+ +V Sbjct: 378 GSLSLQEQQKVFATYPPNTRKVVVATNIAETSVTIDGIVYVVDCGYQKQSLYNSEARVDY 437 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTA 442 L IS+ASA QR GR GR G C RL++ DF + P+ T PEILRTN+ + +L + Sbjct: 438 LLPAVISKASAEQRTGRAGRTRPGKCFRLFTSADFATFPDQTHPEILRTNIVNTVLLLLT 497 Query: 443 LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502 LG+ + FPF++ P + + D L GA+ +LT GR+++ LPVD L Sbjct: 498 LGVANPCEFPFIDPPSDQGMSDAFYQLLYFGAVDD-----GLQLTDFGRRMAVLPVDVCL 552 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562 ARM+L A KHGC +A ++ + L + RP + + E H RF + + D +A ++ Sbjct: 553 ARMLLMAPKHGCGADAAVVAAMLEAGNAFSRPPSRLAEAREAHARFDNADGDHVALFRVF 612 Query: 563 NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS------EP 616 + + Q+ +R C +YL + +++ +Y QLR+++ +L IPV S E Sbjct: 613 HAYFKNQQNG-----KRFCYENYLRHQTLQQAVQVYKQLRRLMSQLMIPVQSTYIPEREY 667 Query: 617 AEYREIHIALLTGLLSHIGMK------------DADKQEYTGARNA-RFSIFPGSGL--- 660 + + A+L G + + D + Y R+A ++ S L Sbjct: 668 VDTVALRKAVLEGFFTQVAFLTPVAPITHRAGADPTTRVYRTVRDALSATLHRQSVLAAA 727 Query: 661 --FKKPPKWVMV--AELVETSRLWGRIAARIDPEWVEPV 695 + P W++ E+ S + R A+ ++ W+ V Sbjct: 728 HKLRALPTWIVFDRLEVQGDSGTFIRTASAVEVGWLLDV 766 >UniRef50_UPI0001BCCC41 ATP-dependent helicase HrpA n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCCC41 Length = 622 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 267/643 (41%), Positives = 375/643 (58%), Gaps = 21/643 (3%) Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 PGSGL KKPP WVM ELVET+RLW R AR+ PEW+E A HL+KR Y+EPHW +GA Sbjct: 1 PGSGLAKKPPAWVMAGELVETNRLWARSVARVQPEWIEEAAAHLVKRQYAEPHWSIKRGA 60 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 VMA E+VT+YGLP+VA R V Y +IDP + RELFIRHALV+G+W+T H F+ N L E Sbjct: 61 VMARERVTLYGLPVVADRLVQYGRIDPEVSRELFIRHALVQGEWRTHHHFWDRNQALVTE 120 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSML 835 V+ELE + RRRD+ DD+TL FYD+RI +V+S RHFD+WWKK R +PDLL+ + ML Sbjct: 121 VDELEDRLRRRDLRADDDTLCAFYDERIPAEVVSVRHFDAWWKKTRRNSPDLLDLTREML 180 Query: 836 IKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQI 895 + + + ++ +P WH L+Y FEPGAD DGVTV +PL L V++ F W + Sbjct: 181 LADSPDADAE--FPREWHSDGESYPLTYAFEPGADVDGVTVDVPLARLLAVDDRAFAWHV 238 Query: 896 PGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTV 955 PG R ELV LI+SLPK +RR FVPA +A + + P L L R++R + G V Sbjct: 239 PGHRVELVTELIRSLPKRLRREFVPAGQFAPRLVAAMDPGSDDLTAELARQMRLLNGTVV 298 Query: 956 DREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQS 1015 D +D+ +PDHL++TFRVVD + +L G++L L++ L ++ L+AVA E++ Sbjct: 299 DADDFDVSALPDHLRVTFRVVD-GDSELARGKNLSALREQLTTHLRADLTAVARQE-ERT 356 Query: 1016 GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 GL W G L + +V +PALVDE SVA+++ D+ EQ AM G RLL Sbjct: 357 GLRRWEVGTLEPTLRAG----QVTGYPALVDEGSSVALRILDSEAEQTAAMVRGQARLLS 412 Query: 1076 LNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 +PSP+ + L AKL L P+ +I++C +D L+ +GGPV E + Sbjct: 413 FALPSPVPGIGRTLDLHAKLLLSTGPHRDAAAVIEECWLAALDALVVRHGGPVRDERSYD 472 Query: 1136 ALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYR 1195 AL E VR E+ D + +L A + V + D++ Q+ LV+ Sbjct: 473 ALREWVRGEMFDETERAVRTSLDVLRAYGEL-------VPLPKTEAGEDVRVQLSWLVHP 525 Query: 1196 GFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR 1255 GF+ G +L YLQA +RL+ D ++ + ++ + + L Sbjct: 526 GFIRDAGTAQLRRLPVYLQAARRRLDTPLTD------DLVAAQELEARFHERTAGLGTWA 579 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 R DV+ +RW +EELRVS AQQL T +P+S KR+ ++ + Sbjct: 580 RLAPDVQHVRWALEELRVSLLAQQLRTAFPVSVKRVTALVDAL 622 >UniRef50_A4RR62 Predicted protein n=3 Tax=Mamiellales RepID=A4RR62_OSTLU Length = 724 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 233/681 (34%), Positives = 352/681 (51%), Gaps = 55/681 (8%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGH 127 P + D+LPVS+ DI A++ + V +V GETGSGKTTQ+ +I + G G + Sbjct: 12 PSTSSTDDLPVSRYANDIASAVKTNAVTVVIGETGSGKTTQIAQILLRSGVVADGSAVAV 71 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AA +VA R+AEE+ E G +GY VRF D T +K +TDG LL E+ +D Sbjct: 72 TQPRRVAAVSVAKRVAEEMGVEIGKEVGYSVRFEDRTCRLTRIKYLTDGTLLRELLEDPT 131 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L +Y +++DEAHERSL+ D L G LK+L+ R +LK++ITSAT+D E+FS +F++AP+ Sbjct: 132 LSRYSVVVLDEAHERSLHTDILFGLLKKLVSAR-ELKLVITSATLDSEKFSTYFDDAPVF 190 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDT 306 V GRT+PV++ + A + + Q AI VD GD+L+F++G+ EI Sbjct: 191 TVPGRTFPVQIAH------ATEAPKSYFQSAIETVVDVHVNTGPGDMLVFLTGQEEIEKA 244 Query: 307 ADALN-------KLNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTV 357 A+ + ++LPLYA L Q+RVF H RRI+ ATN+AETSLTV Sbjct: 245 CRAVEAHVRSMPEGECPDVQVLPLYASLPPDMQSRVFHPHDPNVRRIIFATNIAETSLTV 304 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI +VIDPG + Y T + L + PIS A QR GR GR G C RLY++D Sbjct: 305 PGIVFVIDPGVVKQVEYDAMTGMNALKVVPISSVQAKQRAGRAGRTQAGRCYRLYTKDAL 364 Query: 418 L-SRPEFTDPEILRTNLASVILQMTALGLG--DIAAFPFVEAPDKRNIQDGVRLLEELGA 474 P T PEI RT L IL + L L D+ F F++ PD I D +R L +GA Sbjct: 365 ELDMPAITRPEIQRTCLVGTILYLKTLNLKGLDVMTFDFLDPPDTALIADALRQLYFVGA 424 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 I D +A T +GR++S LP++P L+R ++EA++ CV + + + LS++ Sbjct: 425 IDPDGKA-----TSIGREMSSLPLEPCLSRAMVEAKRLDCVADTATVAAMLSVERVFL-- 477 Query: 535 MDKQQASDEKHRRFHDKE---SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 + A++ H ++ D + ++ SS R+ + L+ + Sbjct: 478 GQHRDATESLHELATHEDFLLGDHAVLLRIYQAWE------SSGYQRKFHQRYSLSDRGM 531 Query: 592 REWQDIYTQLRQVVKELGIP-------VNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 ++I QL V K+ + + +L G ++ I + + Y Sbjct: 532 EFAREIRKQLLGVFKDKRKSDRNDFDCFSRTDEGLNRLRQSLCAGFVTKIAHRLPNHNGY 591 Query: 645 TGAR--NARFSIFPG--SGLFKKP---PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 + + P L K P+W++ EL+ TSR + R +I+PEW+ + Sbjct: 592 RTLGENSTLCQVHPSMARQLADKDGLLPEWIVYHELITTSRPFLRHVCKIEPEWISKQRE 651 Query: 698 HLIKRTYSEPHWERAQGAVMA 718 L K+ + R G V++ Sbjct: 652 LLSKKV----NIHRLSGGVLS 668 >UniRef50_Q22ZC0 Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22ZC0_TETTH Length = 699 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 215/712 (30%), Positives = 344/712 (48%), Gaps = 80/712 (11%) Query: 31 LHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAI 90 + + QQ I E K + L +E NLP+ + +Q +L+ I Sbjct: 3 IEKSQSPNKSTVQQQILVEKNKNGNLGLFNKLQKE--------RKNLPIFKHRQGLLDKI 54 Query: 91 RDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEP 150 + +Q+ ++AGETG GKTTQ+P+ +E G +I TQPRR+AA T+A R+A+E+ T Sbjct: 55 KSNQISVIAGETGCGKTTQIPQYLIEEGLNKNRMIAVTQPRRVAAITIAQRVAQEMNTTV 114 Query: 151 GGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY VRF + V N T + MTDG+LL E D L ++ I+IDEAHER++N D L Sbjct: 115 GNKVGYSVRFEEAVDKNNTKLLYMTDGMLLRETIVDPNLSRFSIIVIDEAHERTINSDLL 174 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 + LK+L RR DLKIII SATI+ E+F+ F II + GR +P+EV Y Sbjct: 175 ISLLKQLSERRKDLKIIIMSATIETEKFANFFETENIIYLEGRCHPIEVFYS------KK 228 Query: 270 TERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILP 322 D L A + + ++ +E GDIL F+ G+ +I D L + + I Sbjct: 229 PHADYLDAALNTILQIHFEEQDGDILCFLVGQEDIEDMQQMLEEKIELFPKEAKKLNICT 288 Query: 323 LYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 LYA L + Q F+ R++VL+TN+AETS+T+ GIKYV+DPG + +Y+ + Sbjct: 289 LYAALPSHLQLLAFEKSQEGERKVVLSTNIAETSVTIDGIKYVVDPGLVKTRKYNPNKLI 348 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQM 440 + L + P+S++SA QR GR GR S G C RLY++ + EF PEILR+NL++VILQM Sbjct: 349 EMLLVVPVSKSSAMQRAGRAGRQSAGKCFRLYTKYTHDTLAEFMLPEILRSNLSTVILQM 408 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 A+G+ D+ F F++ P + + + L+++ A+ +E +T G+++++LP++P Sbjct: 409 KAIGIKDVKGFQFIDRPHEDQFIESIENLQQMNALDANEN-----ITLHGKEMAELPLEP 463 Query: 501 RLARMVLEAQKHG--CVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAF 558 A +L A + + S + +++ P + + + RF SD L Sbjct: 464 IYAHFMLVAFATNPNSISVVLSAISLMQVENLFFIPKGAKISLLDVLLRFQLGNSDQLTK 523 Query: 559 VNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV-------------- 604 VN+ + + S C+ +++N +++ ++ QL Sbjct: 524 VNMLHQYYLAKNKKS------FCKENFINQKNIKKALEVRQQLENYFLDILKKRSKKNQK 577 Query: 605 ---------------------------VKELGIPVNSEPAEYREIHIALLTGLLSHIGMK 637 ++E + E + GL Sbjct: 578 QNQANIQQQSEEQQIQEELAKGNTLKKLQEEHKTAIQQEINTEEFISCIAKGLSVKAAKL 637 Query: 638 DADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARI 687 + D N + I P S LF K P +++ E+V T + + R I Sbjct: 638 NNDGTYTIIRSNIQAYIHPESLLFYSKPKPDYIIFNEVVSTIKTYLRDITEI 689 >UniRef50_Q8SQW7 Possible PRE-mRNA SPLICING FACTOR (ATP-DEPENDENT RNA HELICASE) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQW7_ENCCU Length = 664 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 193/628 (30%), Positives = 327/628 (52%), Gaps = 32/628 (5%) Query: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138 V K +I + QV+++ G+TG GKTT++PK + G I +QPRR+AA ++ Sbjct: 59 VEDKMDEIFAKLEKSQVLLIQGDTGCGKTTKIPKYLLR----KYGKIVCSQPRRIAAVSI 114 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 A ++A ++K + G +GY +RF D S T +K +TDG+LL EI+ D+ L +YD +IIDE Sbjct: 115 AKKVAVDMKGKIGEDVGYSIRFDDMSSGRTRLKYVTDGVLLREIKNDKHLKKYDVVIIDE 174 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258 AHERS+NID LLGYLK +L R DL+++I SAT++ E+F+ F +E+ R +P+E+ Sbjct: 175 AHERSVNIDILLGYLKSILSERKDLRVVIMSATLNSEKFASFF-RCQTVEIRHRMFPLEI 233 Query: 259 RYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKLNLRH 317 + + D + V ++ + E GDIL+F++G EI + L ++ Sbjct: 234 FFLKKSD-----VADYVDEAMKTVVQIHRGEESGDILVFLTGRDEINSGREILMEVLGND 288 Query: 318 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 E+ +Y+ LS EQ VF+ R+IVLATN+AETS+T+ G++YV+D G A+ RYS Sbjct: 289 AEVCCIYSTLSPEEQEAVFRKTKKRKIVLATNIAETSITIEGVRYVVDSGRAKQMRYSAS 348 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 + L + IS+A A QR GR GR G R+YS++++ + T PEI NL ++ Sbjct: 349 FGMDILEVVWISKAQAKQRAGRAGRTQAGKVFRMYSKEEYQKMDDNTTPEIFCCNLGKIV 408 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 L++ ++G+ DI F ++ PD N++ + +L L AI D K+T +G + S +P Sbjct: 409 LELKSIGVDDIVNFNLIDKPDASNVKKALEMLYYLRAIGGDG-----KITSIGVKASTIP 463 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE---RPMDKQQASDEKHRRFHDKESD 554 +DP LA ++ + + GC+ + II + LS+ + R +A DK D Sbjct: 464 LDPELAVSLIVSSELGCLEDVSIIAAMLSVGNVWLDVPRYSQSYKAFLGARAAHFDKRGD 523 Query: 555 FLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS 614 + ++ + +S +R +LN + + I QL + + + Sbjct: 524 HFLLLKIYRRWEKTGFKISH--LKRW----FLNVKTMLQTVKIKKQLCSMFR------SP 571 Query: 615 EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELV 674 ++ I +L G ++ K + + + I S + ++ K+++ L Sbjct: 572 CKSDESGILPSLCAGYFMNVA-KLVGESYVSIFNDTPCFIHYTSCMSRQNAKYILYHTLC 630 Query: 675 ETSRLWGRIAARIDPEWVEPVAQHLIKR 702 T + + R + E + A H+ + Sbjct: 631 RTGKEYARYCVGVTLEDLLKGANHMFAK 658 >UniRef50_B7PNN0 ATP-dependent RNA helicase, putative (Fragment) n=6 Tax=Coelomata RepID=B7PNN0_IXOSC Length = 1042 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 211/698 (30%), Positives = 339/698 (48%), Gaps = 40/698 (5%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVS 80 RD ++ + + + QA+ K+ + +LP+ Sbjct: 341 ARDAHERHKQKYELILEDAIEFVQALRVPGTKDKHKGPELSEGERKKLSLQETRRSLPIF 400 Query: 81 QKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVA 139 ++D+L+AI DHQV + + SG L LG + IG TQPRR+AA +VA Sbjct: 401 PFREDLLQAIADHQVSRLPTPSKSGHYKWLRARTHRLGYTANKMKIGCTQPRRVAAMSVA 460 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 R++EEL + G +GY +RF D S+ T++K MTDG+LL E + L Y II+DEA Sbjct: 461 ARVSEELSVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLSEPDLASYSVIIVDEA 520 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR 259 HER+L+ D L G +K++ RPDLK++I+SAT+D E+FS F++API ++ GR +PV++ Sbjct: 521 HERTLHTDILFGLVKDIARFRPDLKLLISSATLDAEKFSEFFDDAPIFKIPGRRFPVDIY 580 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL----- 313 Y E D L A V ++ + GDIL+F++G+ EI + L + Sbjct: 581 Y------TKAPEADYLDACVVTVLQIHITQPLGDILVFLTGQEEIESCQELLMERTRKLG 634 Query: 314 -NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 +R ILP+Y+ L + Q ++F+ R++VLATN+AETSLT+ GI YVIDPG + Sbjct: 635 SKVRELLILPIYSNLPSELQAKIFEPTPPGARKVVLATNIAETSLTIDGIIYVIDPGFCK 694 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 + Y+ RT + L + PIS+ S + RK R C+ L + P + I Sbjct: 695 QNSYNARTGMDSLVVTPISKHSNSLRKDR------NSCLVLVFNFFTVQAPFYECNGITP 748 Query: 431 TNLASV----ILQMTALGLGDIAAFPFVEAPDKRNIQD--GVRLLEELGAITTDEQASAY 484 V G D F P + + L LGA+ Sbjct: 749 VPQEEVSECPFFLPGVWGYSDGTKSSFEVCPAFSDHSQVLALEQLYALGALN-----HMG 803 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ-DPRERPMDKQQASDE 543 +LT LGR++++ PVDP +A+M+L ++K+ C E + + + LS+ RP DK +D Sbjct: 804 ELTKLGRRMAEFPVDPMMAKMLLASEKYRCSEEVLTVAAMLSVNSSIFYRPKDKIVHADT 863 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 + F D L + ++N E ++ + C +++ + ++ +DI QL Sbjct: 864 ARKNFFSPGGDHLTLMCVYNQWAE------TDFSTQWCYENFIQHRSMKRARDIRDQLEG 917 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 +++ + I + S+ ++ I A+ G + T I P S LF+ Sbjct: 918 LMERVEIELVSDRSDTVAIRKAITAGYFYNTARFSKGGHYKTVKHQQTVMIHPNSSLFED 977 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 P+WV+ ELV T++ + R I+ W+ VA H K Sbjct: 978 LPRWVIYFELVFTTKEFMRQVIEIENSWLLEVAPHYYK 1015 >UniRef50_D0NMK0 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NMK0_PHYIN Length = 912 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 207/695 (29%), Positives = 343/695 (49%), Gaps = 84/695 (12%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL--------- 124 P LP + +++IL+A+ DHQVV+ GETGSGKTTQLP+ G Sbjct: 152 PTPLPALEHREEILQALNDHQVVVCVGETGSGKTTQLPQFLHVCGAYTSSKGGGDEKSQC 211 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGG--CIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 I TQPRR+A +VA R+AEE+ T GG +GY +RF S NT +K +TDG+L+ E Sbjct: 212 IAITQPRRVATVSVAQRVAEEMNTRVGGDGVVGYSIRFESRCSVNTKLKFLTDGVLVREC 271 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 D LL +Y +++DEAHERS++ D LLG LK++ RRP+ +++ITSAT+D ERF+ F Sbjct: 272 LSDPLLQKYSVVMLDEAHERSVHTDLLLGLLKQVTKRRPEFRVLITSATLDAERFAEFFG 331 Query: 243 ------------NAPIIEVSGRTYPVEVRYRPIVE--EADDTERDQLQAIFDAVDELSQ- 287 PI+++ GR +PV++ + + ++A + ++ Sbjct: 332 ESIGKKSKKKVKPCPIVKIPGRVFPVDIFHSKQRQIMGHRGPLSTYVRAAVETTMQVHNS 391 Query: 288 ESHGDILIFMSGEREIRDTA--------DALNKLNLRHTEILPLYARLSNSEQNRVFQS- 338 E G IL+F++G+REI D + + + +LPLY L Q +F + Sbjct: 392 EEPGHILVFLTGQREIEDACAQMRALHREQERRSDGMELRVLPLYGALQGQRQREIFDAV 451 Query: 339 --HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 R++++ATN+AETSLT+ G++YV+D G + Y+ +++ L + PIS+ SA QR Sbjct: 452 SVSRVRKVIVATNIAETSLTIDGVRYVVDCGFTKQKVYNPVQQMESLVVVPISKVSAQQR 511 Query: 397 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GR + G C RLY++ + + T PEI RTNLA+ +L + LG+ D+ FP+++ Sbjct: 512 AGRAGRTAPGKCYRLYNKTSYEEMAQETVPEIQRTNLANTVLYLKLLGVQDVIGFPYLDP 571 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 PD+ ++ D ++ L LGA+ +A T LG+ ++ P++P+L+R ++E+ C R Sbjct: 572 PDEDSLLDALKQLYVLGALDATGEA-----TALGKLMAVFPLEPKLSRALVESLLLDCSR 626 Query: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRR-------------------FHDKESDFLA 557 E + + LS+++ +D QQ K+R ++ D L Sbjct: 627 EMTQVVAMLSVENVL---IDAQQNKKRKNRDGSDEGEDWEQNMLTLREDGLLHEDGDQLT 683 Query: 558 FVNLWNYLGEQQKALSSNAF--RRLCRTDYLNYLRVREWQDIYTQLRQVVKELG------ 609 + L + ++ R C L + + I QLR ++ L Sbjct: 684 YRLLLKAFESKARSAQGRRRDVERWCDDRRLRFRALTMAGSIVKQLRDILDTLSRRDVEA 743 Query: 610 ----IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN-------ARFSIFPGS 658 + + + +L G + + + Y + P S Sbjct: 744 VKGEKDDRRDASLDDRLRQSLCAGFFMNAARRCTMETVYRLVNHDDGKKVAHLVQFHPLS 803 Query: 659 GL-FKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + + PP++ + ELV TS+ + R A ++ W+ Sbjct: 804 VMCYTAPPEFCVYQELVVTSKPFMRGALAVERRWL 838 >UniRef50_Q3LVV7 Putative pre-mRNA splicing factor n=1 Tax=Bigelowiella natans RepID=Q3LVV7_BIGNA Length = 779 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 205/642 (31%), Positives = 345/642 (53%), Gaps = 35/642 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 + LP+ +++A+ + +IV ETG+GKTTQ+PK +G G G IG TQPRR+A Sbjct: 148 NQLPIINSFFPLMKAVDLYDTLIVVAETGAGKTTQIPKYLFSMGYGRLGQIGITQPRRIA 207 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A VA R+A E+ + G +GY +RF D +S+ T +K MT+GILL EI + LL+QY + Sbjct: 208 AINVATRVALEVNSSVGLLVGYVIRFEDCISNLTKIKFMTEGILLREIINEPLLLQYSVL 267 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHERS+ D L LK+L R DLK+II SATI+ +FS+ F+ AP+ ++ G+ Y Sbjct: 268 VLDEAHERSIFSDILFSLLKDLNILRSDLKLIICSATINTNKFSKFFSYAPLFQIPGKIY 327 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL 313 VE+ + ++E D L A+ + ++ + GDIL+F++G+ +I + ++K Sbjct: 328 SVEIY------NSKESEIDYLDAVVRTILQIHIKSKQGDILVFLTGQEDIEIVENIISKR 381 Query: 314 N------LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVID 365 + + E PLYA LS + QN++F + R++VL+TN+AETSLT+ GI +VID Sbjct: 382 SKLIKTLMGQLETFPLYANLSYNLQNKIFLKLPTNKRKVVLSTNIAETSLTISGITFVID 441 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFT 424 G ++ + Y K + L + PI+++SA QR GR GR ++GIC RLY+ D + + Sbjct: 442 SGLCKLKYFDYLAKYETLIVSPIAKSSAWQRSGRAGRTAKGICFRLYTVDTYKFVLRKAI 501 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI R + SVIL + LG+ DI F F++ P ++ + L LG + + Q Sbjct: 502 VPEIQRIEIDSVILILKCLGINDINNFEFLDKPPVESVFASLEHLYILGGLNEEGQ---- 557 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDE 543 L+ LGR + + P+ P L+++++ + H CV E +II S LS++ + Sbjct: 558 -LSKLGRYMCEFPLKPSLSKILIISNFHQCVEEILIICSILSLESRIFNYNHLNNVDQKQ 616 Query: 544 KHRRFH-DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 ++F +SD L+++N++ ++++ + ++ + + + I+ QL Sbjct: 617 VLKKFTIIPKSDHLSYLNVFREW------INNDFSINWTDRNSIDAKIMFKARFIFEQLL 670 Query: 603 ----QVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 +++ I +N I LL+GL + + + + S+ P S Sbjct: 671 GLNQKLLNSQKIGIN--KTNPTMIIKCLLSGLFMNAAFFYSANCYRLLSSSTVVSVHPSS 728 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 L KWV+ +V T++ + + + EW+ A Sbjct: 729 LLLNYNTKWVVFQNIVLTNKEFINVITEVKIEWLIETAPIFY 770 >UniRef50_Q9HE06 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 n=1 Tax=Schizosaccharomyces pombe RepID=YK99_SCHPO Length = 647 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 201/634 (31%), Positives = 333/634 (52%), Gaps = 31/634 (4%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-KGLIGHTQPRRLAA 135 LP+++ + +L A+ +Q+ IV G TG GKTTQ+P+ E G G+IG TQPRRL A Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++V+ R++ EL + PG GY ++F +VS+ T +K MTDGILL EI D LL +Y +I Sbjct: 85 KSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVI 144 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI--IEVSGRT 253 +DE HER+L+ D LLG LK +L +R D +++++SA++D + S+ F + + + G+ Sbjct: 145 LDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKL 204 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK- 312 +PVE + TE AI ++ S GDIL+F+SG +EI + Sbjct: 205 FPVETLFL-----QKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDS 259 Query: 313 -----LNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVID 365 + + LPL+A L+ EQ RVF + G R+++ +TN+AETS+T+ GI YV+D Sbjct: 260 LIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVD 319 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G + Y+ T+ +L PIS++SA QR GR GR G RLY+E + E + Sbjct: 320 SGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFE 379 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 +IL +++ ++L + LGL +I FPF P ++ + L LG + + Sbjct: 380 ADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTD-- 437 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP-MDKQQASDEK 544 PLG Q+S +D +++ +L + + GC E + I S L+ + P + + Sbjct: 438 --PLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVA 495 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H F E D + +N++ +K L + CR +YLNY +R+ DI T L + Sbjct: 496 HSSFFANEGDIITALNVFESFVGNKKDL------QWCRKNYLNYQTLRQALDIRTHLVRF 549 Query: 605 VKELGIPVNSE--PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662 + + IP ++ +I LL G + ++ D Y + + S L + Sbjct: 550 LNKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGS-YKTIGGKQVWLDSSSVLHE 608 Query: 663 KPPKWVMVAELVET-SRLWGRIAARIDPEWVEPV 695 K W+M + VE+ ++++ + ++I+ W++ Sbjct: 609 KKTPWIMYSSAVESETQIFVKNISKIESFWLDKY 642 >UniRef50_Q8SQQ2 PRE-mRNA SPLICING FACTOR (DEAD box family) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQQ2_ENCCU Length = 784 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 208/643 (32%), Positives = 333/643 (51%), Gaps = 44/643 (6%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 LP+ + D++E + H+V+++ GETGSGK+TQ+PK + G G KG+IG TQPR Sbjct: 101 EVSQRLPIESFRDDLMEFVGKHRVIVLVGETGSGKSTQVPKYLYQEGYGDKGIIGCTQPR 160 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R AA ++A+ + E+ +GY +RF + +T ++ MT+GILL E+ D++L +Y Sbjct: 161 RAAAISLASTLKREMGCA----VGYSIRFDSTTTQDTKIRYMTEGILLQELLADKMLRRY 216 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 +I+DEAHER+ N+D +G LK L R DL+III SATI+ ++ +F P + G Sbjct: 217 SVVILDEAHERTTNLDISMGLLKLALKERDDLRIIIMSATIEAQKLCNYFG-CPAFNIEG 275 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGERE--------- 302 R+YPVE RY + DD ++ I GDIL+F++G + Sbjct: 276 RSYPVETRYLSV--NVDDYVEWTVKKILYI---HENCGEGDILVFVTGRDDVEGVVGIVN 330 Query: 303 --IRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQS-HSGRRIVLATNVAETSLTVPG 359 IR+ R ++LP Y++L QNRVFQ+ R+ +++TNVAETSLT+P Sbjct: 331 HCIRNKCFGEGSEGGRGLKVLPFYSQLPEEMQNRVFQAEKDVRKCIVSTNVAETSLTIPN 390 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I YVID G +IS YSY T + L PIS+A+A+QR GR GR G+C R+Y+ D + + Sbjct: 391 IGYVIDTGLQKISVYSYDTG-ESLVTVPISRANADQRTGRAGRTRPGVCYRMYTADTYEN 449 Query: 420 -RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 PEI RTN+ +V+L + G+ DI F FV+ P + IQ + L LGA+ Sbjct: 450 DMLPSPVPEIQRTNIHNVVLLLLKHGVHDILGFDFVDRPSEELIQGALLGLHRLGAV--- 506 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 S LT +G+++S+L +DP LARMVL A +G V E I S LS+ + R DK Sbjct: 507 --CSRGLLTKVGKEMSELRLDPPLARMVLGAAGYGAVNEIASIASMLSVHEVFHRDFDKS 564 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 + DFL +N++N Q+ C ++ ++ + Sbjct: 565 S-------PLCHQGCDFLTLLNIFNAFIRQKN------RSEWCNKMKVSEHALKRATETK 611 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 + ++E+G+P++S +I +++ + ++ + K + + P S Sbjct: 612 RAVLMSLREMGVPISST-RSLDKIQRCIISSVHYNVARR-RGKGYVCLSNFRACMVHPSS 669 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 L ++++ + + T + + I P+ + A + Sbjct: 670 VLADSYSQYIIFYKHLSTRAEYMYCCSNISPQVILEEAGCYYR 712 >UniRef50_A5DZ49 Pre-mRNA splicing factor ATP-dependent RNA helicase PRP2 n=1 Tax=Lodderomyces elongisporus RepID=A5DZ49_LODEL Length = 900 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 204/579 (35%), Positives = 327/579 (56%), Gaps = 35/579 (6%) Query: 53 EIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPK 112 + + + A+ +LPV + + + L I ++QV+IV GETGSGKTTQLP+ Sbjct: 299 DEAERKKQFQRSLEAKEIADVQHSLPVYKFRDEFLRLISENQVLIVVGETGSGKTTQLPQ 358 Query: 113 ICMELGRGIK--GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMV 170 + G +IG TQPRR+AA +VA R+A+E++ G +GY VRF D S NT + Sbjct: 359 YLYQAGYSQNDTKIIGCTQPRRVAATSVAQRVAQEMQEPLGEKVGYTVRFDDKSSRNTRI 418 Query: 171 KLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL-PRRPDLKIIITS 229 K +TDG+LL E + + Y I+IDEAHER+L+ + LL LK+L R DLKIII S Sbjct: 419 KYLTDGMLLREFLNNPEMDSYGAIMIDEAHERTLSTEILLSLLKDLTNSTRSDLKIIIAS 478 Query: 230 ATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS--Q 287 ATI+ +FS FNNAPI+ + GR +PV++ Y E + LQA+ + ++ Q Sbjct: 479 ATINATKFSEFFNNAPILNIPGRRFPVKIHY------TKQPEANYLQAVMTTIFQIHLTQ 532 Query: 288 ESHGDILIFMSGEREIRDTADALNKLNLR---------HTEILPLYARLSNSEQNRVFQS 338 GDIL+F++G+ EI + + + + +YA L N +Q R+F+ Sbjct: 533 PLPGDILVFLTGQEEIESLEQQMQEAIAKLGDQLKEQGKIMVCSIYANLPNEQQQRIFEP 592 Query: 339 HSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 R++VLATN+AETS+T+PG+ YVIDPG + + ++ T ++ L + P S+A+ +QR Sbjct: 593 TPPFTRKLVLATNIAETSITIPGVSYVIDPGYVKQTEFNPHTGMESLLVVPCSKANCDQR 652 Query: 397 KGRCGRVSEGICIRLYSEDDFLSRPEF-TDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 GR GR+ G C R++++ F E T PEI R NL SV+L + +LG+ D+ FPF++ Sbjct: 653 AGRAGRIGPGKCFRIFTKHSFDHEMEMNTKPEIERINLNSVVLLLLSLGINDLIKFPFLD 712 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 P++++I + LL +LG + S +LT G ++S+ P+DP A+ +L +++ G Sbjct: 713 PPNRQSIIKSLSLLYQLGGLN-----SRGELTRTGMKMSEFPLDPTYAKCILSSERFGIT 767 Query: 516 REAMIITSALSIQDPRERPMDK--QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 +E II + L+ K ++ ++H +F DK+ D L +N++ A + Sbjct: 768 KEICIIIAMLTESSNLYYIPKKLDKEMVKKRHEQFVDKQGDHLTLLNVYKQW-----AGT 822 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 + C+ ++ Y ++ +DIY QL + ++GI V Sbjct: 823 GGYSNQWCQDYFIQYKTMKRVRDIYKQLIGICLKVGITV 861 >UniRef50_Q4E099 ATP-dependent DEAD/H RNA helicase, putative n=5 Tax=Trypanosoma RepID=Q4E099_TRYCR Length = 887 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 226/765 (29%), Positives = 364/765 (47%), Gaps = 116/765 (15%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 +++K D + +E K+ A + R +LP+ ++ +LE IR + Sbjct: 131 ERIKKHDFVEDKTEEQIKQQRTEAIQEQHRRLQ----EQRRSLPIYHSREALLEIIRKNT 186 Query: 95 VVIVAGETGSGKTTQLPKICMELGRG-----------------------------IKGLI 125 VVI+ GETGSGKTTQL + E + Sbjct: 187 VVIIVGETGSGKTTQLLQYLYEENLCRTPPCLTEGGDGGGKGKEEKEGEEEEGTSEEKRF 246 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 TQPRR+AA +VA R+A+E+ T G +GYKVRF + + T + +TDG++L E+ D Sbjct: 247 ICTQPRRIAAISVAERVAQEMNTRCGSIVGYKVRFDEKLGPTTRLLFVTDGMMLKELVGD 306 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 L I++DEAHERS+N D LLG LK++ R LK+I+ SATI+ E+FS F+ AP Sbjct: 307 PELRTVSAIMVDEAHERSINTDILLGLLKDITRRNKQLKVIVASATINAEKFSSFFDGAP 366 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES--HGDILIFMSGEREI 303 I + GRT+PV+V Y + D + A ++V L GDIL+F+ G+ +I Sbjct: 367 IFTIKGRTFPVDVSYLT------EPMADYVSATAESVLLLHATKPLPGDILVFLPGQEDI 420 Query: 304 RDTADALNK------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSL 355 + A A+ + LR +LP+YA L EQ R+++ + R++V+ATN+AETS+ Sbjct: 421 ENCAAAIREGIANSGGQLRPLMVLPIYASLPPREQRRIYEVPPPTTRKVVIATNIAETSI 480 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+ G+ YV+D G + + Y+Y++ V+ L + PISQASA QR GR GR +G C RLY+ Sbjct: 481 TIDGVVYVVDCGLCKQNYYNYQSMVEELRVLPISQASAKQRTGRAGRTQKGECYRLYTAY 540 Query: 416 DFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 F + P+ T PEI R+ ++SV+LQ+ ALG+ ++ F F++AP +++ + L LGA Sbjct: 541 TFRNELPQETVPEIQRSCMSSVVLQLKALGIDNLLQFEFIDAPSTASLERALDHLYLLGA 600 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 I + +LT GR++++ P+DP L++ +L C+R I + L++ Sbjct: 601 IKPNG-----RLTLTGRRMAEFPLDPSLSKCILRGSALRCLRHMAIAVAMLTLDSVFVVS 655 Query: 535 MDKQQASDEKHRR---FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 D ++ + R F D + +V L ++ C++ +N + Sbjct: 656 RDPKERASIASARDVLFSAGNGDVMGYVRLMEEWMRAGPSMH-----EFCQSHSVNAKAL 710 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEY----REIHIALLTGLLSHIGMKDADKQEYTGA 647 + +D+ Q+ + LG+ + S E ALL G ++ +AD++ Y Sbjct: 711 LQARDVLDQILNTCERLGLDLPSGEEETSLSMENFTKALLAGFFMNVAKLNADRRTYLIV 770 Query: 648 R--NARFS---------------------IFPGSGLFKK--------------------- 663 R +A S + P S LF Sbjct: 771 RPIDASVSRSGHNHNNYNALDAEETATAELHPSSYLFNAGLEKKDGKSNRNGSMVSTAPT 830 Query: 664 ---PPKWVMVAELVETSRLWGRIAARIDP-EWVEPVAQ-HLIKRT 703 P+ V+ +L TS+ + I +WV A + R Sbjct: 831 LRERPELVVFTQLRYTSKRYMMHVTAISSVDWVLTTAPENYFTRE 875 >UniRef50_Q4Q0J4 RNA helicase, putative n=7 Tax=Trypanosomatidae RepID=Q4Q0J4_LEIMA Length = 697 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 213/699 (30%), Positives = 339/699 (48%), Gaps = 84/699 (12%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME---LGRGIKGLIGHTQPR 131 +LPV++ I+ IR +Q VIV GETGSGKTTQ+P+ + R G++G TQPR Sbjct: 6 PDLPVTEAWASIVRMIRKNQAVIVVGETGSGKTTQIPQYVWDDILSKRPGAGIVGCTQPR 65 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R+AA ++A +A + + GG + Y VRF D + T +K +TDGILL EIQ D +L +Y Sbjct: 66 RVAAVSIARHVARQRGGKVGGEVAYAVRFDDTCTSATRIKFLTDGILLREIQADPVLSKY 125 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEVS 250 II+DEAHER+L+ D L G LK + +R D LKI++ SAT++ E FS+ + NAPI V Sbjct: 126 GCIILDEAHERTLHGDVLFGLLKAIARQREDSLKIVVMSATLNAEHFSKFWWNAPIGVVH 185 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVD-ELSQESHGDILIFMSGEREIRDTADA 309 GR +PV + + + + D ++A + E GDIL F++G+ E+ D Sbjct: 186 GRMFPVTIMH------TVEPQADYVEAAISTILLIHHTEPPGDILCFLTGQEEVEDAKRI 239 Query: 310 LNKL------NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIK 361 L + ++ +L LYA + +Q VF+ + R+++LATN+AETS+TV GI+ Sbjct: 240 LLERMKLLPNDVPDFSVLTLYAAMPYEQQLLVFEPNLNEQRKVILATNIAETSITVEGIR 299 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YV+D G + Y+ ++ ++ L IS+A A QR GR GRV+ G C RLY+ + F + Sbjct: 300 YVVDSGVVKAKYYNSKSGMEMLTEVDISRAQATQRTGRAGRVAAGKCYRLYTANAFENLS 359 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 E T PEI R++L SV+LQM +L + +I AF F++ P R + L L A+ Sbjct: 360 ENTIPEIRRSSLLSVVLQMKSLHIHNILAFEFMDMPRPRAVAKAEETLMLLQALD----- 414 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 A +T LG +L+ P++P A ++L A+ G REA+I+ + S + + ++A+ Sbjct: 415 KAGHITALGARLTDFPIEPMPAMVLLAAKALGVAREAVIVIAMSSTDNLFLTSREFKEAA 474 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY---------------- 585 D F D ++++ + + Sbjct: 475 DRCRAAFAKSAGDHATLLSIYQAYCHSPRDQRKTWCESNAMSHRQMLKVEDVITQLQCIL 534 Query: 586 ----------------LNYLRVREWQDIYTQLR------------------QVVKELGIP 611 L YLR D+ TQL + ++ G Sbjct: 535 EEKSDSELLAKIIPASLRYLRAGAGGDLSTQLHKRPRGEIVDDTNDLLERYEELRHGGGG 594 Query: 612 VNSEPA-------EYREIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFPGSGLF-- 661 +++ + + AL G + +A Y T I P S LF Sbjct: 595 LSTGATERKGKLLDAELLRRALCFGYFLNAAFYNAKLGMYQTIVGQLPVYIHPSSVLFTH 654 Query: 662 KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 +K P V+ +V T++ + + + + EW++ A + Sbjct: 655 RKKPALVIFNSVVRTTKRYMKDVSVVQEEWLQDAAPDFL 693 >UniRef50_B2S1H1 ATP-dependent protease La n=22 Tax=Borrelia RepID=B2S1H1_BORHD Length = 828 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 217/625 (34%), Positives = 358/625 (57%), Gaps = 20/625 (3%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K ++++ +R + V+IV TGSGKTTQ+P+I E G G IG TQPRR+A Sbjct: 6 LPIYKYKDELIKKLRTNNVLIVESPTGSGKTTQIPRIIYEAGLAKLGKIGVTQPRRIATI 65 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A IA+ + G +GYK+RF + S T +KLMTDG+LL E+++D LL +YD III Sbjct: 66 SIAEYIAKHIGVNLGEEVGYKIRFQEITSPKTKIKLMTDGVLLQELKKDTLLYEYDVIII 125 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLNIDF+LG +K++L +R D K+II+SATI+ + FS++FNNAPI+ + TYPV Sbjct: 126 DEAHERSLNIDFILGLIKDILKKRNDFKVIISSATINTKVFSKYFNNAPILNIETITYPV 185 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR 316 ++ Y P + + +++ I + + ++ GDILIF+SGE+EI++T A+ +LN + Sbjct: 186 QIIYNPPLLNTSKSMILKIKEIISGI--IKEKKEGDILIFLSGEKEIKETIKAIYELNSK 243 Query: 317 -HTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 ILPLY R++ Q ++F + R+I+++TN+AETS+T+ IK VID G + ++ Sbjct: 244 QDLVILPLYGRMAKEAQEQIFMPTPKNKRKIIVSTNIAETSITIENIKIVIDSGKVKTNK 303 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 + +T L PIS++SA QR GR GR+S+G C RLY D++ R E+ EI RT+L Sbjct: 304 FQMKTHTYSLQEVPISKSSATQRAGRAGRLSKGTCYRLYKRDEYQLRDEYQKEEIYRTDL 363 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 + VIL+M +G+ + F F+ P ++IQ +L+ L AI + LT +G+ + Sbjct: 364 SEVILRMADIGIRNFTKFDFISKPSIKSIQTASDILKSLDAINEKNE-----LTEIGKYM 418 Query: 494 SQLPVDPRLARMVLEA--QKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 P+ P +R ++EA + I S LS P +++ + + H ++ + Sbjct: 419 IIFPLIPIHSRALVEAMINYQKAIYPTTIGLSFLSTSGVFLLPQNEEIEARQAHLKYKNP 478 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 D + F+N++ + + +YL+ + E ++ QL +V IP Sbjct: 479 LGDLIGFINIFEDYKKAINKED------FAKENYLDLQGLEEITNVQRQLENIVSSFNIP 532 Query: 612 V-NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMV 670 + ++ + +++ G+ +I K K +Y + I PGS + K+ + Sbjct: 533 IVHTHEIDQEGYLKSIMRGMKDYICFKSL-KNKYKTIKAQNVVIHPGSLINTDSVKYFVA 591 Query: 671 AELVETSRLWGRIAARIDPEWVEPV 695 E++ETS+ + R + EW+ + Sbjct: 592 GEIIETSKRYARSIGVLKKEWINDI 616 >UniRef50_Q4N5J8 RNA helicase, putative n=1 Tax=Theileria parva RepID=Q4N5J8_THEPA Length = 619 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 195/599 (32%), Positives = 313/599 (52%), Gaps = 32/599 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LP++ K I E I+++Q +I+ G TGSGK+T +P K + TQPRR+A Sbjct: 4 ESLPINLVKDLIFEKIKENQCLILVGSTGSGKSTSVPLWLYTSFTNPKQKLVVTQPRRVA 63 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A ++A +A TE G +G+ VRF + +++T +K +TDGIL+ E D LL +Y + Sbjct: 64 AISLAKYVANLTNTELGTTVGFNVRFLNKSNESTRIKYVTDGILMRESISDPLLSKYSIV 123 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 IIDE HERS+ D LLG +K L +RP+LK+I+ SATID F+ F N+ I V GR + Sbjct: 124 IIDEVHERSIRSDILLGIIKLALTKRPELKLIVMSATIDSNVFNEFFQNSFTINVPGRLF 183 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL 313 PV++ Y P E D ++A +V +++ GDIL+F+ G+ +I L + Sbjct: 184 PVDIYYTPAPFE------DYIEAAMISVLQINLSTETGDILVFLPGQEDIEILERLLKQK 237 Query: 314 ------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVID 365 ++ I PLY+ LS QN VF+ R++VLATN+AETSLT+PGIKYVID Sbjct: 238 VKHLNDSMESLVICPLYSALSLERQNLVFKTTPPKSRKVVLATNIAETSLTIPGIKYVID 297 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G + +Y+ + + L + S++SA QR GR GR G RLY+ D + P+ T Sbjct: 298 TGLVKQRKYNPKNNFESLTVNITSKSSAKQRAGRAGREGPGEIYRLYTLDSYEKMPQNTT 357 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI + + V LQ+ +G+ DI FPF++ PDK I L LGA+ ++ Sbjct: 358 PEIHLIDFSFVFLQLKMIGVKDIFEFPFIDPPDKGTILSAALNLYRLGALDSEGN----- 412 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT G+ ++Q+P+ P +++++ + + C E + I S LS + + Sbjct: 413 LTEAGKMMAQIPLLPMHSKLLISSFEFSCTSEILTIVSILSSEIALFDTEKFNPEGVKLR 472 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 ++K D L +N++N ++N+ C+ +N +DI QL ++ Sbjct: 473 SNLYNKYGDHLTLLNIYNLWE------NANSRETFCKQFAVNNHAFNRAKDIRNQLVSII 526 Query: 606 --KELGIPVNSEPAE---YREIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFPGS 658 ++ G+ S+ + + ++ L G ++ + + Y T N I P S Sbjct: 527 TSEQFGVKNISKLTDSSSWDQVRKCLTKGNWTNSAKFCPETKSYNTLVNNQCVYIHPSS 585 >UniRef50_A0E003 Chromosome undetermined scaffold_70, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0E003_PARTE Length = 616 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 207/631 (32%), Positives = 334/631 (52%), Gaps = 34/631 (5%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 + LP+ Q ++ I+++IRD+QV+I+AGETG GKTTQ+P+ E I TQPR Sbjct: 4 EFRTQLPIFQFREKIIKSIRDNQVIIIAGETGCGKTTQIPQYIYEN--DPNVKIAVTQPR 61 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ-------Q 184 RLAA T+A R + E +T+ G IGY VRF D S T + +TDG+L+ E + Sbjct: 62 RLAAMTLAERCSLEKQTKLGQLIGYNVRFDDCTSKETQITFLTDGMLIREFIIGIFVDYK 121 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 D+ L +YD IIIDEAHER++ D LLG LK L RR LK+I+ SAT+ E+F+ + Sbjct: 122 DQQLKRYDVIIIDEAHERTVQSDLLLGLLKNLCRRRKQLKVILMSATMQIEKFANYLETE 181 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREI 303 I + RT+ V+V PI ++ D ++++ + + +L + GDIL F++G+ +I Sbjct: 182 AIHIIEARTHTVDVFNVPIRQQ------DYVESMVNTILQLHFTQPEGDILAFLTGQEDI 235 Query: 304 RDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVP 358 D + L + + ++ LY+ L Q FQ R++VLATN+AETS+T+ Sbjct: 236 EDVKEILIERMKISNQEKQLDVKMLYSALPPEVQLEAFQKSVHRKVVLATNIAETSITID 295 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI YV+D G +I + + L + P+S+A A QR GR GR +G C RLY++ + Sbjct: 296 GIVYVVDCGYVKIRSFQIGKAIDTLLLAPVSKAQAEQRAGRAGRQRQGQCYRLYTQQTYE 355 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 ++ PEILR NL SVILQM A+G+ ++ F ++ PD + + L +L A+ ++ Sbjct: 356 RLAKYMLPEILRVNLLSVILQMKAIGIQNVLTFDLIDRPDMELMLANLNQLVKLKALDSE 415 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 + LT G+ +S LP++P+ + +++A + G A+ S L +++ + Sbjct: 416 -----FNLTEHGKNMSSLPLEPQFSHFLIKAYECGIFDLALNSISILQVENLFYFQRGTK 470 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 ++ + +F SD L N+ E Q S C+ + LN+ +++ + Sbjct: 471 ESMQKILAKFKIANSDHLTKANILRKYEETQNKKS------FCKENCLNHKTLQKAMSVK 524 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGA-RNARFSIFPG 657 QL+ +K + I E +Y + L L+ + Q Y N I P Sbjct: 525 QQLKDYMKRI-IKKEFEKEDYDKFKQVLSEALMFKHAVYSPSDQAYKLKQTNQLAYIHPE 583 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARID 688 S LF + PK+V+ E++ T +++ R ID Sbjct: 584 SVLFNQKPKYVIYNEVILTKKVYLRDVTEID 614 >UniRef50_B6H9G3 Pc16g10890 protein n=15 Tax=Leotiomyceta RepID=B6H9G3_PENCW Length = 809 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 351/733 (47%), Gaps = 94/733 (12%) Query: 40 PDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA 99 P A+ + D + LRE A+ + LPV + I + +R+ V+++ Sbjct: 87 PAAKPYAKSKSKPFTDTKTNFIPLREKAKALLETRRKLPVFENADLIRDLLREQDVMLLV 146 Query: 100 GETGSGKTTQLPKICMELGRGIK-----------------GLIGHTQPRRLAARTVANRI 142 GETGSGK+TQ+P+ ++ G I TQPRR+AA ++A R+ Sbjct: 147 GETGSGKSTQIPQFLVDEFWCRPVPTQVTRDGKTEKKVVGGCIAITQPRRVAAISLARRV 206 Query: 143 AEELKTEPGG-----CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIID 197 AEE+ T G +GY VRF S +T VK +T+G+LL E+ D L +Y I++D Sbjct: 207 AEEMGTPLGSHSPASKVGYSVRFDTSTSPSTRVKFLTEGMLLQEMLHDPNLTKYSAIVVD 266 Query: 198 EAHERSLNIDFLLGYLKELLPRRPD------LKIIITSATIDPERFSRHFN-------NA 244 E HER +N+D LG+L+ L+ + LK+++ SAT D E + F A Sbjct: 267 EVHERGINVDLTLGFLRNLVSGNKEGRGGVPLKVVVMSATADMESLTDFFKQGFKQTEPA 326 Query: 245 P----------------------IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAV 282 P + + GR +PV+ Y P D + A + Sbjct: 327 PKAIQAAEDEADKMDTSTPKDISVCHIKGRQFPVKTIYSPA------PVHDFVDAALKVI 380 Query: 283 DELSQESH--GDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNR 334 ++ Q+ GDIL+F++G+ + +N+ +L +LPL+A L + Q R Sbjct: 381 FQIHQKEPMPGDILVFLTGQETVEALEHLVNEYAMGMDPSLPKILVLPLFAALPQAAQQR 440 Query: 335 VFQSHSGR--RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 VF R +IVL+TN+AETS+TV G+++V+D G A++ ++ R + L ++PIS+++ Sbjct: 441 VFAPAPPRTRKIVLSTNIAETSVTVSGVRHVVDCGKAKVKQFRTRLGLDSLLVKPISKSA 500 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFP 452 A QRKGR GR + G C RLY+E D+L+ E PEILR +L+ +L M A G+ DI FP Sbjct: 501 AIQRKGRAGREAPGQCFRLYTEKDYLALDETNTPEILRCDLSQALLNMKARGVDDIVGFP 560 Query: 453 FVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512 F+ P + ++ + L + A+ D K++P+G +++LP+ P L R++L A +H Sbjct: 561 FLTRPPREALEKALLQLLNINALEDDG-----KISPVGLHIAKLPLTPTLGRVLLAAAEH 615 Query: 513 G--CVREAMIITSALSIQDPRER--PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 G C+ + + I S LS+++ +K++A++ R + +E D L + + Sbjct: 616 GSECLLDVIDIISCLSVENIFLNTTSEEKKEAAEAARRDLYRREGDHLTMLTTVRVYAAE 675 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR-------E 621 Q + +++ ++ D+ QLR ++ + N Sbjct: 676 QADR-----KAWAERHLVSHRAMQSVMDVRKQLRTQCRQAKLLTNEALNNTSLHDPSPIL 730 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 I + L G ++ D T N +I P S L+ K + +M E V T+R + Sbjct: 731 ILQSFLAGFATNTARLVPDGSYRTIVGNQTVAIHPSSVLYGKKLEAIMYNEFVFTNRSYA 790 Query: 682 RIAARIDPEWVEP 694 R + + +WV Sbjct: 791 RGVSAVQMDWVGE 803 >UniRef50_D2A3P7 Putative uncharacterized protein GLEAN_15731 n=1 Tax=Tribolium castaneum RepID=D2A3P7_TRICA Length = 1068 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 224/748 (29%), Positives = 346/748 (46%), Gaps = 104/748 (13%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ ++Q I+E I ++ VVI+AGETGSGKTTQ+P+ E G +K I T+PRR+AA Sbjct: 243 LPILAEEQQIMETINENPVVIIAGETGSGKTTQVPQFLYEAGYALKKQIAVTEPRRVAAI 302 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++ R+A+E+ + Y +RF + +++T +K MTDG+LL E+Q D LL QY +I+ Sbjct: 303 AMSKRVAQEMNLSS-NEVSYLIRFEGNATEDTKIKFMTDGVLLKEVQNDFLLSQYSVVIL 361 Query: 197 DEAHERSLNIDFLLGYLKELLPRR----PDLKIIITSATIDPERFSR----HFNNAPIIE 248 DEAHERS+ D L+G L ++P R LK+II SAT+ E F++ P+I Sbjct: 362 DEAHERSVYTDILIGLLSRIVPLRVKRGDPLKLIIMSATLRVEDFTKNKRLFKKTPPVIN 421 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTA 307 V R +PV V + E D L F V ++ + G +L+F++G++E+ Sbjct: 422 VDSRQFPVTVHFNKRTNE------DYLSESFTKVVKIHTKLPEGGVLVFVTGQQEVNSLV 475 Query: 308 DALNK-------------------------------------------------LNLRHT 318 L + Sbjct: 476 KKLRAKFPFKVKLNEEAEPTKLKQKKVYAPEVNLDDYDPDWSSESEEEESERPLYHAPPL 535 Query: 319 EILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 376 +LPLY+ L +QNRVFQ R V++TNVAETSLT+P IKYV+D G ++ Y Sbjct: 536 WVLPLYSMLPTHKQNRVFQAPPPGCRLCVVSTNVAETSLTIPNIKYVVDSGRTKVKLYDK 595 Query: 377 RTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLAS 435 T V + S+ASANQR GR GR G C RLYS F + +F PEI + + Sbjct: 596 ITGVSSYVVTWTSKASANQRAGRAGRTGPGHCYRLYSSAVFNDTLHDFCVPEIQQKPVDD 655 Query: 436 VILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQ 495 + LQM + + + FPF APD ++ LE LGA+ ++TPLGR +++ Sbjct: 656 LYLQMKCMSIDKVVNFPFPTAPDLLQLKTAEHRLEILGALQN------SQVTPLGRAIAK 709 Query: 496 LPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDF 555 PV PR +M+ + + + + + +ALS+Q+ +D + + + + S Sbjct: 710 FPVLPRFGKMLALSHQQDLLPYTICMVAALSVQEVL---LDDAKWAALRRQWAATGNSLL 766 Query: 556 LAF-VNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV-- 612 L + L +G + A + N + C + L + V E + + QL +K +P Sbjct: 767 LGDSMVLLRAVGAAEFANTQNRLEQFCHANGLRHKAVLEIRKLRLQLTNEIKA-NVPEAD 825 Query: 613 --------NSEPAEYREIHIALLTGLLSHIGMKDAD-----KQEYTGARNA-RFSIFPGS 658 + + + LL G+ I K K Y + GS Sbjct: 826 VVVDPALAPPTDLQAKLLRQILLAGMGDQIAKKIESEDKKFKYGYQANNMEDPVFLHSGS 885 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT--YSEPHWERAQGAV 716 L K P++V+ E+ ET++++ R I+PEW+ L + +EP G V Sbjct: 886 VLRKNLPEFVIYHEIYETNKIYMRGVTAIEPEWLPVYVPSLCNLSEPLAEPEPRLKNGKV 945 Query: 717 MATEKVTV----YGLP---IVAARKVNY 737 T T + LP I R +NY Sbjct: 946 YCTVNGTFGSQGWTLPNVEIEYPRTINY 973 >UniRef50_B6K0W8 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K0W8_SCHJY Length = 653 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 199/641 (31%), Positives = 324/641 (50%), Gaps = 39/641 (6%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRR 132 + LP+++ ++++L I +HQV +V G TG GK+TQL + E G G I T+PR+ Sbjct: 22 RELLPIARFRRELLYLIENHQVTVVIGSTGCGKSTQLTQYLYESGWAESGKCIACTEPRK 81 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 + +++A R+AEE+ G GY + F S T VK +TDG+LL E+ D LL QY Sbjct: 82 VVVKSLAQRVAEEMGCTLGEECGYGMSFESCTSKTTKVKYITDGLLLQEMFIDPLLTQYS 141 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----NAPIIE 248 I++DE HER++ D LL LK++L +R DL+II+ SAT+D E+ +F + Sbjct: 142 VIMLDEVHERTIATDLLLCLLKKILKQRSDLRIIVASATLDAEKLEEYFKVDQLSCTTFH 201 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGD--ILIFMSGEREIRDT 306 + R +PV+V Y E + L+ + +++ + D IL+F+SG EI + Sbjct: 202 LESRLFPVDVFYLSTPTE------NYLENAIEVCSSINKTAPADDDILVFLSGRAEIDEC 255 Query: 307 ADALNKLNLRH------TEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVP 358 L +LR+ LPLY+ L+ EQ RVFQ R++V ATN+AE S++V Sbjct: 256 VKRLETASLRNIGSAPQMVALPLYSGLTLDEQMRVFQKVEQGSRKVVFATNIAEASISVE 315 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI YVID G ++ Y+ + L ISQASA+QR GR GR G C RLY+E F Sbjct: 316 GITYVIDCGYEKVRVYNPYNRSTALVKTSISQASADQRAGRAGRTKPGKCFRLYTEAAFS 375 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 + + PE+ ++L +L + A+G+ +I F++ P + L LGA+ Sbjct: 376 ALKAKSSPELTHSDLIQPLLFLKAMGIKNIVNLSFLDNPPTVQFMAALEELYFLGALDE- 434 Query: 479 EQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 LT PLG +++ P+ PRL++ +L A K GCV+E + I S L+I Sbjct: 435 ----MGHLTRPLGYSMAEFPLHPRLSKTLLTAAKFGCVQEVLNICSILTITTNLFIKRSS 490 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 + + +F +E D L +N ++ +Q++ R C LN + + + + Sbjct: 491 AEYFN-SFYKFAVEEGDLLTQLNAFHAYLKQKRE------SRWCSNHCLNAQSLLQAEQV 543 Query: 598 YTQLRQVVKELGIPVNS-EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 +L+Q +++ G+ S +P + I L S++ + + Y I Sbjct: 544 QQRLQQYLRKFGVYATSRKPTDKTNILKCFLASHYSYVAKRQRNGS-YKTPEGLNVYIDK 602 Query: 657 GSGLFKKPPKWVMVAELVET--SRLWGRIAARIDPEWVEPV 695 S L ++ P W+M E ET + + ++ + I+ W+ Sbjct: 603 DSVLHEQTPTWIMYYE-AETIGEKTYAKVVSVIEGAWLRDY 642 >UniRef50_Q16ZW5 ATP-dependent RNA helicase n=11 Tax=Eukaryota RepID=Q16ZW5_AEDAE Length = 1246 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 197/594 (33%), Positives = 317/594 (53%), Gaps = 35/594 (5%) Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 R NLPV+ + +I+ A+++ Q+VI+AG+TG GK+TQ+P+ G I Sbjct: 243 RKLRKAQANLPVASHRDEIVAAVKNEQIVILAGDTGCGKSTQVPQYLYHAGYE---KIAC 299 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+A +++ R+A E+ E G +GY++RF S T + +T+G+LL ++ + Sbjct: 300 TQPRRIACISLSKRVAHEMLCEYGTQVGYQIRFERSKSTQTNILFITEGLLLRQLSAEEN 359 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF--NNAP 245 L QY II+DE HER L+ DFLLG K L+ +PD+K+++ SATI+ + F +F A Sbjct: 360 LSQYSVIILDEVHERHLHGDFLLGITKCLMRAKPDIKLVLMSATINIKLFGDYFAEEKAQ 419 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDT--------------ERDQLQAIFDAVDELSQESHG 291 IIEV GR +P+++ Y P +++ T +Q + + G Sbjct: 420 IIEVPGRLFPIKLHYMPQIQDVPTTSSGKSKQKTSDRISPEPYIQILQLIDQKYPPTEKG 479 Query: 292 DILIFMSGEREIRDTADALNK--LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLA 347 D+LIF+SG EI DA + ++ ILPL++ LS +EQ++VF R+ +++ Sbjct: 480 DVLIFLSGLNEITSIVDAAKEYAEKNKNWIILPLHSTLSIAEQDKVFDYPPDGIRKCIIS 539 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETS+T+ GI++VID G + Y TK+QRL IS+ASA QRKGR GR GI Sbjct: 540 TNIAETSVTIDGIRFVIDSGKVKEMSYDATTKMQRLKEFWISKASAEQRKGRAGRTGPGI 599 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 C RLYSE F +T EIL+ L S++LQM ++GL + FPF+E+P NI++ + Sbjct: 600 CYRLYSEKQFYDFESYTTAEILKVPLESLLLQMISMGLPNARMFPFIESPPAENIENAIM 659 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L+ A+T DE KLTPLG+ L+++PVD + +M+L ++ + + + LS+ Sbjct: 660 NLKHHEALTVDE-----KLTPLGKALARIPVDIGIGKMLLMGCVFQQLQPVLTLAATLSV 714 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL-------GEQQKALSSNAFRRL 580 Q P ++ + + F D + +N + E ++ + + Sbjct: 715 QSPFTNRAYREPECERARKSFESDHGDPITLLNAYKEWLELKQNRFEYRRDEHRESSKSW 774 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 CR L R E + Q + ++++ G+ N+ A+ G L + Sbjct: 775 CRRRGLEEQRFYEITKLRRQFQDLLQDCGLMENANSDSMTSAERAIRHGELKQL 828 >UniRef50_Q9DBV3 Probable ATP-dependent RNA helicase DHX34 n=23 Tax=Euteleostomi RepID=DHX34_MOUSE Length = 1145 Score = 637 bits (1643), Expect = e-180, Method: Composition-based stats. Identities = 203/593 (34%), Positives = 331/593 (55%), Gaps = 21/593 (3%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 +R HG + P+ + + +D + R A LP++Q IL Sbjct: 117 TRGRHGPGRGLPPERVSEFRRALLHYLDFQQKQAFGRLA--KLQRERAALPIAQYGNRIL 174 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELK 147 + +++HQVV+VAG+TG GK+TQ+P+ + G + TQPRR+A ++A R+ E Sbjct: 175 QTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIACISLAKRVGFESL 231 Query: 148 TEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNID 207 ++ G +GY++RF S T + +T G+LL +IQ++ L QY +I+DE HER L+ D Sbjct: 232 SQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHND 291 Query: 208 FLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEA 267 FLLG L+ LLP+RPDLK+I+ SATI+ FS +F++AP+++V GR +P+ V Y+P + Sbjct: 292 FLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQ 351 Query: 268 DDTERDQLQ-----AIFDAVD-ELSQESHGDILIFMSGEREIRDTADALNKLNL--RHTE 319 ++ ++L + +A+D + E GD+L+F+SG EI DA + Sbjct: 352 TASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQAYASLTQRWV 411 Query: 320 ILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 +LPL++ LS S+Q++VF R+ +L+TN+AETS+T+ GI++V+D G + Y + Sbjct: 412 VLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQ 471 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 K+QRL ISQASA QRKGR GR G+C RLY+E D+ + + PEI R L +++ Sbjct: 472 AKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALV 531 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 LQM ++ +GD FPF+E P +++ + L+E GA+ + E LTP+G L+QLP Sbjct: 532 LQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSE-----ALTPIGSLLAQLP 586 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 VD + +M++ + I +ALS+Q P R R + D Sbjct: 587 VDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDPFT 646 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI 610 N++N + + S N R+ CR + R+ E ++ Q ++++++ G+ Sbjct: 647 LFNVFNAWVQVKSERSGN-SRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGL 698 >UniRef50_B6KSU8 Pre-mRNA splicing factor RNA helicase, putative n=3 Tax=Toxoplasma gondii RepID=B6KSU8_TOXGO Length = 939 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 231/787 (29%), Positives = 349/787 (44%), Gaps = 107/787 (13%) Query: 1 MTEQQKLTFTALQQRLDSL-MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAG 59 + E ++ L L R + + + + + + + Sbjct: 161 LGESEESRERRLHASAGRLHERRADPGLEKANAKTGRGNSAGPSEDSRKRLRRTASSGVA 220 Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 ++ + LP+ + +A+ HQV ++ GETGSGKTTQ+P+ G Sbjct: 221 PASEKQ------RFAGELPIHGFVDVVRDAVSRHQVTLIVGETGSGKTTQVPQFLHFFGF 274 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEEL-----------------KTEPGGCIGYKVRFSD 162 KG++ TQPRR+AA ++A R++EEL GG +GY VRF D Sbjct: 275 TQKGVVAVTQPRRVAAVSLARRVSEELSRKQDASSETQEDLPEHNASLGGFVGYCVRFED 334 Query: 163 HVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD 222 S T +K +TDG+L+ E D +L +Y +++DEAHERSL D LLG++K LLP+R D Sbjct: 335 CTSAETRIKFLTDGMLVREAMLDEMLSRYSVVVLDEAHERSLRTDILLGWMKRLLPKRKD 394 Query: 223 LKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE--------------EAD 268 LK+I+ SAT+D E+F F A + V GR +PVE+ Y P E Sbjct: 395 LKVIVMSATLDTEKFLGFFPGAQTVLVPGRQFPVELMYTPEPEGDYIEAALITVLQIHTQ 454 Query: 269 DTERDQL------------QAIFDAVDELSQE---------------------------- 288 D L Q I + EL ++ Sbjct: 455 YPPGDILVFLPGQEDIESLQTILEGKQELLRKALCMAASLGAGPAPKTAARSERGGEQRA 514 Query: 289 -SHGDILIFMSGEREIR---DTADALNKLNLRHTEILPLYARLSNSEQNRVF--QSHSGR 342 H L + E+R DTA R +I PL+A L Q VF R Sbjct: 515 VPHSKDLSSANCRVEVRIGEDTAAVDQLPPCRDLQICPLFAALPFERQKAVFTPAPAGVR 574 Query: 343 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGR 402 ++++ATN+AETS+TV GI+YV+D G A+ ++RT V+ L IE ISQ +A QR GR GR Sbjct: 575 KVIVATNIAETSITVQGIRYVVDCGLAKAKCVNHRTGVEALVIEEISQDAAKQRAGRAGR 634 Query: 403 VSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 + G+ R+Y+ED F PEI+ +L V L++ LG+ + FPF+++P K Sbjct: 635 EAPGVVFRMYTEDTFNKFRPRKVPEIVTCDLDQVFLELKTLGVQNPLEFPFLDSPPKEAF 694 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 + R L L A+ S +LT LGR+L+ LP+ P L ++VL++ C E + I Sbjct: 695 VNAGRTLHRLEAVD-----SRGQLTELGRKLAVLPLKPILGKLVLDSVTFECTAEILSIV 749 Query: 523 SALSIQDPRER----PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 + LS P DK RR D + D L +N + E ++ Sbjct: 750 AMLSTDSLWYSHRSLPADKSNRLLHARRRLSDNQGDHLTLLNAYTQWDEATDKIA----- 804 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV----NSEPAEYR-EIHIALLTGLLSH 633 C+ L++ + + I TQL Q++ I V SE + R +I L G H Sbjct: 805 -FCKEYGLHHNALLRAKQIRTQLEQILLSPQIGVKNVAKSEAPDTRTKIRQCLAAGCWLH 863 Query: 634 IGMKDADKQEY-TGARNARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPE 690 D++ Y T I P S L + P W++ +E V T+R + R I+ Sbjct: 864 TARLQRDQKTYVTTVERETAKIHPSSVLSGQKSLPWWIVYSEYVHTTRPYLRGVTAIEGP 923 Query: 691 WVEPVAQ 697 W++ Sbjct: 924 WLQQFVP 930 >UniRef50_B7FZA2 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FZA2_PHATR Length = 665 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 217/676 (32%), Positives = 334/676 (49%), Gaps = 44/676 (6%) Query: 55 DQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC 114 + A K ++ + NLPV + ++L AIR ++V+V TGSGK+TQ+P Sbjct: 6 ETAKKKRHRSDSIDSLANFRQNLPVYAYRTELLRAIRSPKIVLVTASTGSGKSTQIPAYL 65 Query: 115 MELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMT 174 ++ + ++ TQPRR+AA T+A R+A E + G IGY+VRF D +T + +T Sbjct: 66 IDS----EHVMAVTQPRRVAATTLAQRVAHEHQGIVGHQIGYRVRFDDCTRSDTQLTYVT 121 Query: 175 DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP------DLKIIIT 228 DG+LL E D LL +Y I +DEAHERSL D LLG ++ R L+I++ Sbjct: 122 DGMLLREAMVDPLLRKYSIIFLDEAHERSLQTDILLGVVQRARKSRQQSYSRRPLQIVVM 181 Query: 229 SATIDPERFSRHFNNAPI--IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 SAT+ + F F + IE+ GR +PV++ Y + E D ++A + ++ Sbjct: 182 SATLQVQTFEDFFGKENVVRIEIPGRQFPVQMLYTSVPAE------DYMEATLATILQIH 235 Query: 287 -QESHGDILIFMSGEREIRDTADALN-----KLNLRHTEILPLYARLSNSEQNRVFQSHS 340 E GD+L+F+ G+ EI D A L +L I LYA L Q F Sbjct: 236 THEEAGDVLVFLPGQEEIEDLATLLRGNTVSQLLANGVLICLLYAALPPEAQLAAFAEKP 295 Query: 341 ---GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 R+I+LATN+AETS+T+P I+YV+D G ++ R T + L +E +SQA A QR Sbjct: 296 EGCRRKIILATNIAETSVTLPAIRYVVDTGKHKL-RQILATGMDSLTVESVSQAQAAQRA 354 Query: 398 GRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 GR GR+ G+C RLY+ED F + PEILR LA VILQ+ +G+ D F FV P Sbjct: 355 GRAGRIGPGLCFRLYTEDAFERLDPDSLPEILRVGLAQVILQLKGMGVQDPTTFDFVTPP 414 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 D ++ +LL LGA+ A +LT G++L++LP+DP ++L++ ++ C E Sbjct: 415 DTSSLVRAAKLLYALGAVND-----AMELTDYGKKLAKLPLDPVFGHLLLKSAEYSCTSE 469 Query: 518 AMIITSALSIQDPRERPM--DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN 575 + + LS ++ RP + + HRRF E D F+N++ + S Sbjct: 470 MLTAVAVLSAENVFYRPTTGEVIAKAAAAHRRFASHEGDLPTFLNVYQAWEREASYHSRV 529 Query: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVV------KELGIPVN-SEPAEYREIHIALLT 628 C+ ++++ + + QLR LG+ VN + + Sbjct: 530 LHGEWCQRNFVSGRSLGRAYHVRQQLRSTCLRPAEKNGLGMDVNVTCGKDRESFLKCAAA 589 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAAR 686 GL + + + E N SI P S +F + P V+ ELV T + + R + Sbjct: 590 GLFLQVASRTKAETEIDSRGNETVSIHPTSTMFGRHPAPACVVFTELVTTKKTYIRGVTQ 649 Query: 687 IDPEWVEPVAQHLIKR 702 I EW+ VA + Sbjct: 650 IREEWLHEVAPVFYPK 665 >UniRef50_Q3LWK5 Spliceosome dissassembly protein PRP43 n=2 Tax=Chlorarachniophyceae RepID=Q3LWK5_BIGNA Length = 631 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 200/641 (31%), Positives = 335/641 (52%), Gaps = 44/641 (6%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 +LP+ + + IL+ ++ V+I+ G+TGSGK+TQ+P+ + I TQPRRL Sbjct: 8 DSSLPIFEARDHILKQLKIKNVLIIIGDTGSGKSTQVPRFLLNEYIEPHSKIACTQPRRL 67 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA ++A R+++E++ G +G+ VRF VS +T + +T+GILL E+ D LL + T Sbjct: 68 AAMSLAKRVSQEIEKSTGSLVGFSVRFERCVSKHTKIIYLTEGILLRELASDPLLSVFTT 127 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 IIIDEAHER+L D LLG KE++ R LK+II SAT++ +F +F N I V GR Sbjct: 128 IIIDEAHERTLFTDLLLGIFKEIIKLRKYLKVIIMSATLEVNKFFNYFWNTVSILVPGRL 187 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILIFMSGEREIRDTA---DA 309 + VE+ Y A E++ L+ + + + GDIL+F++GE +I + Sbjct: 188 FEVELLY------AKHAEKNYLRTSIMLIFNIQRSFFGGDILLFLTGEDDIEEFCLIMTK 241 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHSGR--------RIVLATNVAETSLTVPGIK 361 L KL ++ + PLY+ LS+ Q +FQ H ++ +TN+AE+S+T+ GI Sbjct: 242 LLKLYKKNIRVYPLYSNLSSEYQEELFQLHKNNSKDKDVYFNVIASTNIAESSITLDGIS 301 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SR 420 +VID G ++I ++ R K+ L I PIS+ASA+QR GR GR G C RLY+E+ F Sbjct: 302 FVIDGGFSKIKIFNPRLKIDSLLIYPISKASAHQRSGRAGRTKPGKCFRLYTENCFNFKL 361 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 + PEILRTNL ++IL + +G+ D+ F F++ P I + LL Sbjct: 362 ADQLCPEILRTNLHNMILIIKKIGIEDLVHFDFIDPPPPETIMRALELLNL-----LGAL 416 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI----QDPRERPMD 536 S LT +G +S++P++P+ + ++E++K+ C E + I + LS + ++ Sbjct: 417 NSNGLLTKIGLVMSEIPIEPQSTKAIIESKKYRCCNEIISIIAMLSSNFTMRSSSTINIE 476 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 K S H+ + D L +N+++ + K+ + + +NY + Sbjct: 477 KGWKSGIIHK-----DGDHLTILNIYHLWRSKCKS------KIWASKNGMNYKLLEFVDK 525 Query: 597 IYTQLRQVVKELGIPVNSEPAEYR----EIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 + +L + LG+ + SE + R +I A+ +G K +K T + Sbjct: 526 LRIKLINLCYRLGVKLISEFEDNRNYFSKIRKAIFSGYFLQTARKLTEKMYITDLDHHSV 585 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 I P ++K + VM L ++ L+ I +++ W++ Sbjct: 586 LIHPSCKVYKSY-RCVMYNSLFFSTALFMCIVTKVNDSWMK 625 >UniRef50_A4ICP7 DEAH-box RNA helicase, putative n=4 Tax=Trypanosomatidae RepID=A4ICP7_LEIIN Length = 944 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 223/801 (27%), Positives = 361/801 (45%), Gaps = 153/801 (19%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 + ++ ++ F E+ ++ A R + +LP+ Q ++++++ IRD++ Sbjct: 156 RVARHAYVREKTFAELQEDRAAALQGQKERLQLQ-----RRSLPMHQAREELVKLIRDNR 210 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKG------------------------------- 123 VVI+ GETGSGKTTQL + E G + Sbjct: 211 VVIIVGETGSGKTTQLLQYLYEEGFHLGPKARKRLLTTPAGAAASSKMKAEADGEGDRAM 270 Query: 124 ---------LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMT 174 + TQPRR+AA +VA R+A+E+ G +GYKVRF D T + +T Sbjct: 271 ADEEQEEELRLICTQPRRIAAISVAERVAQEVGCPCGSVVGYKVRFDDKTGPLTRILFVT 330 Query: 175 DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDP 234 DG++L E D L I++DEAHERSL+ D LLG L++++ R PDLK+I+ SATI+ Sbjct: 331 DGMMLKEFTNDPDLSSVGAIMVDEAHERSLSTDILLGLLRDVIRRNPDLKVIVASATINA 390 Query: 235 ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAV--DELSQESHGD 292 E+FS F+ AP+ VSGRTYPVE+ Y D+ D + V LS+ GD Sbjct: 391 EKFSDFFDKAPVFTVSGRTYPVELFYS------DEPVADYVTESAQTVLGLHLSKPLPGD 444 Query: 293 ILIFMSGEREIRDTADALN------KLNLRHTEILPLYARLSNSEQNRVFQS--HSGRRI 344 +L+F+ G+ I A+ L K LR ILP+Y+ + EQ R+++ R++ Sbjct: 445 VLVFLPGQDAIETCAETLQSYMDEAKGRLRPLLILPIYSSMPPKEQARIYERTLPGTRKV 504 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 V+ATN+AETS+T+ G+ YV+D G + Y+ + V+ L + P SQASA QR GR GR Sbjct: 505 VIATNIAETSITIDGVVYVVDCGLCKQDYYNPQAMVEELRVVPTSQASATQRAGRAGRTQ 564 Query: 405 EGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 G C RL++ F + P T PEILR ++++V+LQ+ ALG+ ++ F F++AP +++ Sbjct: 565 PGECYRLFTAYTFHNELPPETIPEILRCSMSAVVLQLKALGIHNLLQFDFLDAPSTASLE 624 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 + L LGA+ D +LT GR++++ P++P L++ ++ A GC R + + Sbjct: 625 RALDHLFLLGAMKADG-----RLTVTGRRMAEFPLEPSLSKCLIRACALGCGRHMAMAAA 679 Query: 524 ALSIQDPRERPMDKQQASDEKHRR---FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 +++ D ++ K R F D ++ L + Sbjct: 680 MITLDSIFINTRDAKERQHIKSAREHLFGFGNGDVTGYIRLMEEWL-----RAGPRAGEF 734 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA----------------------- 617 CR++ +N + +D+ Q+ + +G+ V P+ Sbjct: 735 CRSNCINARSMLRARDVLDQILKTFDRIGLDVERVPSKSHSDGKDLDDENDALEKVLSAA 794 Query: 618 ----EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS-------------------- 653 + + ALL+G ++ +ADK Y R S Sbjct: 795 ANQIDVEAVTRALLSGFFFNVAKLEADKWSYLVVRPMDTSVPTGAKRLESAGTAEASVAE 854 Query: 654 IFPGSGLFKK--------------------------PPKWVMVAELVETSRLWGRIAARI 687 I P S LF P V+ ++ +++ + I Sbjct: 855 IHPTSFLFGAGRKSNAHRTPSGTTDAEAGVPPVLRERPGLVVFLQMRRSTKRFMTHVTAI 914 Query: 688 -DPEWVEPVAQHLIKRTYSEP 707 EWV A Y P Sbjct: 915 ASAEWVLQSAP----VNYFRP 931 >UniRef50_Q5KNB9 ATP-dependent RNA helicase prh1, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KNB9_CRYNE Length = 814 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 219/757 (28%), Positives = 357/757 (47%), Gaps = 104/757 (13%) Query: 31 LHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAI 90 ++GV K+P ++ + G R A + LP Q ++ ILE I Sbjct: 51 VNGVYSPKSPKKRKIGQANGDLGKGKKDGAEARRREAERLLVKRKELPFYQGRRMILEEI 110 Query: 91 RDHQVVIVAGETGSGKTTQLPKIC------------MELGRGIKGLIGHTQPRRLAARTV 138 + I+ GETG GK+TQLP++ R I TQPRRL A + Sbjct: 111 MANDTTIILGETGCGKSTQLPQLLRTHPVSVNHFSPSSSNRFRGPSIAITQPRRLPAIAL 170 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ-QDR----------- 186 ANR+++E+ + GG +GY VRF D S T V+ +T+G+L+ E+ D Sbjct: 171 ANRVSQEMGCQIGGEVGYSVRFEDVTSRETRVRYLTEGVLMRELAGSDPKICPPEKGANG 230 Query: 187 -------------------LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDL---- 223 LL+ YD +IIDEAHER+LN DFL G LK + R D+ Sbjct: 231 TANGEDENDSHMSEGQGLNLLLNYDVVIIDEAHERTLNTDFLCGALKRVQRIRKDIARRQ 290 Query: 224 ---------KI-----------IITSATIDPERFSRHFN-NAPIIEVSGRTYPVEVRYRP 262 KI +I SAT+DP +F F + V GR Y V Sbjct: 291 AEEEFQGKEKIPGKKKVKELKLVIMSATLDPTKFKTFFGTGRDALLVKGRMYEV------ 344 Query: 263 IVEEADDTERDQLQAIFDAVDELS--QESHGDILIFMSGEREIRDTADALNKL------N 314 + + D ++A V + +S GD+L+FM G EI + + L ++ Sbjct: 345 ATQHVLEPVDDFIEAAARQVMTIHCSPDSPGDVLVFMPGSEEIENCVELLKRVSKQLAPG 404 Query: 315 LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 ++LPLYA L + Q+++F + RR+++ATN+AETS+T+PG+ +V+D G + Sbjct: 405 SPALQVLPLYAALPPTAQSKIFIPTPDNTRRVIVATNIAETSMTIPGVAFVVDSGFKKEK 464 Query: 373 RYSYRTK--VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 Y +R ++ L + IS+ASA QR GR GR G C RL+++D F PEF PEI R Sbjct: 465 EYVFRNAGALEHLRKKGISKASAWQRTGRAGRERAGHCYRLFTQDFFDKMPEFDAPEIQR 524 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRN---IQDGVRLLEELGAITTDEQASAYKLT 487 NL+S +LQ+ A+G + F +++ P + + + + L L A+ +S +T Sbjct: 525 CNLSSAVLQLIAMGQ-NPFEFEYIDNPGRDSTNTVLAAFQELVGLSAL-----SSPTTIT 578 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQASDEKHR 546 PLG Q+ + P+DP AR++L A ++GC E + I S ++ + + ++ + + + Sbjct: 579 PLGLQMLRFPLDPPHARILLAAFEYGCANEIIDIISLVNAGGNVFIDRPNDREEAAQARQ 638 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-------LCRTDYLNYLRVREWQDIYT 599 +F +E D L +N++ E +++ SS+ C+ +++N + + + Sbjct: 639 KFIHREGDHLTMMNVFRAYTELKESKSSSHSNSSSQSLVGWCKDNHVNSKTLAQALKVRE 698 Query: 600 QLRQVVKELGIPVN-SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QLR++ + LG S +E+ + +LL GL + + AD A + I P S Sbjct: 699 QLRELSERLGKDWKASCGSEWGMVGRSLLQGLFMNTAVIQADGSYRQTAGSLTVKIHPSS 758 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 L K ++ EL T+ + R + + W+ V Sbjct: 759 VLMSKKVPAILYDELTITTAFYARNVSAFEQHWLTEV 795 >UniRef50_B2S3B9 ATP-dependent helicase n=3 Tax=Treponema RepID=B2S3B9_TREPS Length = 668 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 233/638 (36%), Positives = 351/638 (55%), Gaps = 23/638 (3%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 LPV +K IL A+ H V++V TGSGKTTQLP I E G G IG TQPRR+A Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 +V+ IA+++ G +GYK+RF DH T +K+MTDGILL E++ D LL +Y I Sbjct: 65 VLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSII 124 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++DEAHERSLNIDF+LG LK +L +R D +I+I+SATI+ FSR+FN P+I++ Y Sbjct: 125 MVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAY 184 Query: 255 PVEVRYRPI----VEEADDTERDQLQAIFDAVDE-LSQESHGDILIFMSGEREIRDTADA 309 PV V + P + E L+ I V+ ++ G ILIF+ GER I++ Sbjct: 185 PVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITR 244 Query: 310 LNKLN-LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDP 366 L+ R +LPLY RLS EQ +VF R++V+ATN+AETS+T+ + VID Sbjct: 245 LSHERWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDS 304 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDP 426 G +++ Y+ + L PISQAS NQR+GR GRV G C RLYS DDF R +T Sbjct: 305 GLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLE 364 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI RT+L+ V+++M LG+ D F F+ P I L LGA+ D L Sbjct: 365 EIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDR-----SL 419 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKH--GCVREAMIITSALSIQDPRERPMDKQQASDEK 544 + +G+ + P+ PR +RM++EA + + + +I + LS + P D+++ + + Sbjct: 420 SEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKA 479 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H F D DF++F+ ++ ++ S C+ YL+ + E +I QL + Sbjct: 480 HGTFSDPMGDFVSFLRIYRAYAQENNKHS------FCQHFYLDERIMAEISNIKEQLELI 533 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 V +G P+ + E I + TG++ + + + Y I PGS ++K Sbjct: 534 VSGMGFPLLT-GGTVEEYLICVGTGMIQFVCV-QEHRDSYRSLTAECIHIHPGSCVYKDR 591 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 PK+++ E+V TSR++ + + + E +A L++R Sbjct: 592 PKFIVAGEIVRTSRMYAMSVSPLSKKIAELIAPALLER 629 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P43329 ATP-dependent RNA helicase hrpA n=101 Tax=Bacter... 1763 0.0 UniRef50_B7VPK9 ATP-dependent helicase n=201 Tax=Bacteria RepID=... 1701 0.0 UniRef50_Q65SL6 HrpA protein n=9 Tax=Pasteurellaceae RepID=Q65SL... 1674 0.0 UniRef50_P45018 ATP-dependent RNA helicase hrpA homolog n=53 Tax... 1656 0.0 UniRef50_Q3JBJ6 ATP-dependent helicase HrpA n=3 Tax=Chromatiacea... 1641 0.0 UniRef50_Q47MH0 ATP-dependent helicase HrpA n=13 Tax=Bacteria Re... 1640 0.0 UniRef50_A4X5M6 ATP-dependent helicase HrpA n=6 Tax=Actinomyceta... 1586 0.0 UniRef50_B9Z2A4 ATP-dependent helicase HrpA n=1 Tax=Lutiella nit... 1567 0.0 UniRef50_A1U107 ATP-dependent helicase HrpA n=4 Tax=Gammaproteob... 1566 0.0 UniRef50_B5GG28 ATP-dependent helicase n=3 Tax=Streptomyces RepI... 1564 0.0 UniRef50_Q0A864 ATP-dependent helicase HrpA n=9 Tax=Gammaproteob... 1543 0.0 UniRef50_A6VYA9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1542 0.0 UniRef50_Q482P9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1541 0.0 UniRef50_Q21LQ8 ATP-dependent helicase HrpA n=2 Tax=Gammaproteob... 1537 0.0 UniRef50_Q1N0P2 ATP-dependent helicase HrpA n=1 Tax=Bermanella m... 1537 0.0 UniRef50_Q2Y975 ATP-dependent helicase HrpA n=2 Tax=Proteobacter... 1533 0.0 UniRef50_Q47AH6 ATP-dependent helicase HrpA n=7 Tax=Betaproteoba... 1525 0.0 UniRef50_Q0F3B4 ATP-dependent helicase HrpA n=1 Tax=Mariprofundu... 1514 0.0 UniRef50_B5JXZ9 ATP-dependent helicase HrpA n=1 Tax=gamma proteo... 1514 0.0 UniRef50_Q0S1M3 ATP-dependent helicase hrpA n=5 Tax=Corynebacter... 1510 0.0 UniRef50_A3YEF6 ATP-dependent helicase HrpA n=1 Tax=Marinomonas ... 1509 0.0 UniRef50_B2U9W9 ATP-dependent helicase HrpA n=11 Tax=Betaproteob... 1500 0.0 UniRef50_A4BTJ3 ATP-dependent helicase HrpA n=1 Tax=Nitrococcus ... 1500 0.0 UniRef50_A4VNQ0 ATP-dependent helicase HrpA n=32 Tax=Proteobacte... 1498 0.0 UniRef50_C5BR02 ATP-dependent helicase HrpA n=1 Tax=Teredinibact... 1493 0.0 UniRef50_C1DAE5 HrpA n=2 Tax=Betaproteobacteria RepID=C1DAE5_LARHH 1490 0.0 UniRef50_Q1QXI6 ATP-dependent helicase HrpA n=17 Tax=Gammaproteo... 1486 0.0 UniRef50_A9WQ04 ATP-dependent helicase n=1 Tax=Renibacterium sal... 1480 0.0 UniRef50_A6C1G8 ATP-dependent helicase HrpA n=1 Tax=Planctomyces... 1480 0.0 UniRef50_B0RGP0 ATP-dependent helicase n=3 Tax=Actinobacteria (c... 1479 0.0 UniRef50_B2JJC7 ATP-dependent helicase HrpA n=89 Tax=cellular or... 1473 0.0 UniRef50_Q3SHC5 ATP-dependent helicase HrpA n=3 Tax=Betaproteoba... 1471 0.0 UniRef50_B9ZMZ4 ATP-dependent helicase HrpA n=1 Tax=Thioalkalivi... 1465 0.0 UniRef50_C8NU49 ATP-dependent helicase HrpA n=8 Tax=Corynebacter... 1450 0.0 UniRef50_D1VDH3 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. ... 1446 0.0 UniRef50_Q31H28 ATP-dependent helicase HrpA n=1 Tax=Thiomicrospi... 1445 0.0 UniRef50_B2GLW1 ATP-dependent RNA helicase HrpA n=7 Tax=Bacteria... 1445 0.0 UniRef50_Q1YSZ9 ATP-dependent helicase HrpA n=2 Tax=unclassified... 1444 0.0 UniRef50_C0VVM1 HrpA family ATP-dependent helicase n=2 Tax=Coryn... 1440 0.0 UniRef50_D2S4R8 ATP-dependent helicase HrpA n=1 Tax=Geodermatoph... 1438 0.0 UniRef50_D2NU22 HrpA-like helicase n=4 Tax=Bacteria RepID=D2NU22... 1434 0.0 UniRef50_C1ZJL9 ATP-dependent helicase HrpA n=1 Tax=Planctomyces... 1429 0.0 UniRef50_A0L8U8 ATP-dependent helicase HrpA n=1 Tax=Magnetococcu... 1420 0.0 UniRef50_C4LJ32 Putative ATP-dependent helicase n=1 Tax=Coryneba... 1418 0.0 UniRef50_C5CA12 ATP-dependent helicase HrpA n=5 Tax=Micrococcace... 1416 0.0 UniRef50_C7ME24 ATP-dependent helicase HrpA n=1 Tax=Brachybacter... 1407 0.0 UniRef50_C8X757 ATP-dependent helicase HrpA n=1 Tax=Nakamurella ... 1404 0.0 UniRef50_C8RTL0 ATP-dependent helicase n=4 Tax=cellular organism... 1400 0.0 UniRef50_A0Z814 Helicase, ATP-dependent n=3 Tax=unclassified Gam... 1396 0.0 UniRef50_D0LBQ9 ATP-dependent helicase HrpA n=2 Tax=Corynebacter... 1394 0.0 UniRef50_B8FCF5 ATP-dependent helicase HrpA n=1 Tax=Desulfatibac... 1392 0.0 UniRef50_B8KHJ8 ATP-dependent helicase HrpA n=1 Tax=gamma proteo... 1381 0.0 UniRef50_D0WKL4 ATP-dependent helicase HrpA n=1 Tax=Actinomyces ... 1374 0.0 UniRef50_A5EVC9 ATP-dependent helicase HrpA n=1 Tax=Dichelobacte... 1374 0.0 UniRef50_A4SYB1 ATP-dependent helicase HrpA n=1 Tax=Polynucleoba... 1371 0.0 UniRef50_B6BTD8 ATP-dependent helicase HrpA n=2 Tax=Betaproteoba... 1371 0.0 UniRef50_A9GK92 ATP-dependent helicase HrpA n=2 Tax=Myxococcales... 1370 0.0 UniRef50_C7NIQ1 ATP-dependent helicase HrpA n=1 Tax=Kytococcus s... 1369 0.0 UniRef50_D1BIN2 ATP-dependent helicase HrpA n=1 Tax=Sanguibacter... 1369 0.0 UniRef50_B0TXK9 HrpA-like helicase n=2 Tax=Francisella philomira... 1369 0.0 UniRef50_C0QAN7 HrpA n=1 Tax=Desulfobacterium autotrophicum HRM2... 1368 0.0 UniRef50_B7GWG2 ATP-dependent helicase HrpA n=17 Tax=Acinetobact... 1366 0.0 UniRef50_Q0VPC9 ATP-dependent helicase HrpA n=2 Tax=Alcanivorax ... 1366 0.0 UniRef50_C7RBD8 ATP-dependent helicase HrpA n=1 Tax=Kangiella ko... 1366 0.0 UniRef50_A0LMI5 ATP-dependent helicase HrpA n=1 Tax=Syntrophobac... 1350 0.0 UniRef50_Q2LSZ0 ATP-dependent helicase n=1 Tax=Syntrophus acidit... 1349 0.0 UniRef50_D2R0M6 ATP-dependent helicase HrpA n=1 Tax=Pirellula st... 1337 0.0 UniRef50_C7QZ06 ATP-dependent helicase HrpA n=1 Tax=Jonesia deni... 1333 0.0 UniRef50_A8ZWI2 ATP-dependent helicase HrpA n=1 Tax=Desulfococcu... 1330 0.0 UniRef50_Q6A8Y5 ATP-dependent helicase HrpA n=3 Tax=Propionibact... 1327 0.0 UniRef50_C8N990 ATP-dependent helicase HrpA n=1 Tax=Cardiobacter... 1320 0.0 UniRef50_A5WE54 ATP-dependent helicase HrpA n=4 Tax=Moraxellacea... 1319 0.0 UniRef50_C8QXF3 ATP-dependent helicase HrpA n=1 Tax=Desulfurivib... 1316 0.0 UniRef50_D2UEZ1 Putative atp-dependent helicase protein n=1 Tax=... 1316 0.0 UniRef50_D0KXD2 ATP-dependent helicase HrpA n=1 Tax=Halothiobaci... 1315 0.0 UniRef50_A6WCM9 ATP-dependent helicase HrpA n=5 Tax=Bacteria Rep... 1305 0.0 UniRef50_Q7USX6 ATP-dependent helicase hrpA n=1 Tax=Rhodopirellu... 1295 0.0 UniRef50_Q1NTJ0 ATP-dependent helicase HrpA n=2 Tax=delta proteo... 1261 0.0 UniRef50_Q1H207 ATP-dependent helicase HrpA n=3 Tax=Methylophila... 1241 0.0 UniRef50_Q6AL39 Related to ATP-dependent helicase HrpA n=1 Tax=D... 1233 0.0 UniRef50_A8L7U0 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. ... 1221 0.0 UniRef50_D1N0X8 ATP-dependent helicase HrpA n=1 Tax=Victivallis ... 1214 0.0 UniRef50_B2UQA6 ATP-dependent helicase HrpA n=1 Tax=Akkermansia ... 1213 0.0 UniRef50_C2KSU4 HrpA family ATP-dependent helicase n=3 Tax=Mobil... 1179 0.0 UniRef50_Q12AX3 ATP-dependent helicase HrpA n=1 Tax=Polaromonas ... 1173 0.0 UniRef50_B3DQA9 HrpA-like helicase n=21 Tax=Bifidobacteriaceae R... 1163 0.0 UniRef50_C4KC73 ATP-dependent helicase HrpA n=1 Tax=Thauera sp. ... 1155 0.0 UniRef50_C5BVQ3 ATP-dependent helicase HrpA n=3 Tax=Bacteria Rep... 1111 0.0 UniRef50_D1BTV1 ATP-dependent helicase HrpA n=4 Tax=Bacteria Rep... 1098 0.0 UniRef50_A3M3Z2 ATP-dependent helicase n=1 Tax=Acinetobacter bau... 1092 0.0 UniRef50_C1RH11 ATP-dependent helicase HrpA (Fragment) n=1 Tax=C... 1070 0.0 UniRef50_C0VY42 HrpA family ATP-dependent helicase n=1 Tax=Actin... 1045 0.0 UniRef50_D0W5V2 ATP-dependent helicase HrpA n=3 Tax=Neisseria Re... 966 0.0 UniRef50_B4CU07 Helicase-associated domain protein n=2 Tax=Verru... 949 0.0 UniRef50_Q09530 Probable pre-mRNA-splicing factor ATP-dependent ... 921 0.0 UniRef50_Q6BRT9 DEHA2D13882p n=8 Tax=Saccharomycetales RepID=Q6B... 913 0.0 UniRef50_Q7PT33 AGAP007212-PA n=4 Tax=cellular organisms RepID=Q... 911 0.0 UniRef50_Q14562 ATP-dependent RNA helicase DHX8 n=78 Tax=Eukaryo... 911 0.0 UniRef50_C0NP73 ATP-dependent RNA helicase DHX8 n=10 Tax=Dikarya... 906 0.0 UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helic... 902 0.0 UniRef50_C4QEZ9 ATP-dependent RNA Helicase, putative n=21 Tax=Eu... 900 0.0 UniRef50_B6ADS3 DHX8/prp22-type ATP-dependent RNA helicase, puta... 894 0.0 UniRef50_A7AWE8 RNA helicase, putative n=2 Tax=Piroplasmida RepI... 892 0.0 UniRef50_Q54MH3 Putative pre-mRNA-splicing factor ATP-dependent ... 891 0.0 UniRef50_C5KUX0 ATP-dependent RNA helicase DHX8, putative n=1 Ta... 887 0.0 UniRef50_C4M6S9 Helicase, putative n=3 Tax=Entamoeba RepID=C4M6S... 884 0.0 UniRef50_B2ANS3 Predicted CDS Pa_6_9920 n=3 Tax=Saccharomyceta R... 884 0.0 UniRef50_O22899 Probable pre-mRNA-splicing factor ATP-dependent ... 884 0.0 UniRef50_B0JZ95 Dhx16 protein n=5 Tax=Fungi/Metazoa group RepID=... 880 0.0 UniRef50_Q6P404 DEAH (Asp-Glu-Ala-His) box polypeptide 38 n=9 Ta... 879 0.0 UniRef50_C4QXH4 DEAH-box RNA-dependent ATPase/ATP-dependent RNA ... 878 0.0 UniRef50_A0D4B2 Chromosome undetermined scaffold_37, whole genom... 872 0.0 UniRef50_Q5KGT3 Pre-mRNA splicing factor, putative n=7 Tax=Dikar... 871 0.0 UniRef50_Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helic... 871 0.0 UniRef50_Q75EQ9 AAR020Wp n=2 Tax=Saccharomycetaceae RepID=Q75EQ9... 868 0.0 UniRef50_B5JKC1 ATP-dependent helicase HrpA n=5 Tax=Bacteria Rep... 865 0.0 UniRef50_Q54NJ4 Putative pre-mRNA-splicing factor ATP-dependent ... 861 0.0 UniRef50_C0SAG2 Pre-mRNA-splicing factor ATP-dependent RNA helic... 860 0.0 UniRef50_O45244 Probable pre-mRNA-splicing factor ATP-dependent ... 857 0.0 UniRef50_C9RLX0 Helicase-associated domain protein n=1 Tax=Fibro... 856 0.0 UniRef50_C4Y9K0 Putative uncharacterized protein n=1 Tax=Clavisp... 854 0.0 UniRef50_Q5CYX6 Prp16p pre-mRNA splicing factor. HrpA family SFI... 854 0.0 UniRef50_P53131 Pre-mRNA-splicing factor ATP-dependent RNA helic... 851 0.0 UniRef50_Q10752 Pre-mRNA-splicing factor ATP-dependent RNA helic... 851 0.0 UniRef50_Q7XIR8 Os07g0508000 protein n=4 Tax=Embryophyta RepID=Q... 846 0.0 UniRef50_O60231 Putative pre-mRNA-splicing factor ATP-dependent ... 846 0.0 UniRef50_Q9P774 Pre-mRNA-splicing factor ATP-dependent RNA helic... 845 0.0 UniRef50_D1H6K3 Whole genome shotgun sequence of line PN40024, s... 845 0.0 UniRef50_B6AI28 Pre-mRNA-processing protein 8, putative n=1 Tax=... 845 0.0 UniRef50_B6AHK6 Pre-mRNA-splicing factor ATP-dependent RNA helic... 845 0.0 UniRef50_A2EVN8 Helicase, putative n=1 Tax=Trichomonas vaginalis... 844 0.0 UniRef50_Q1C7D5 ATP-dependent helicase HrpA n=4 Tax=Bacteria Rep... 842 0.0 UniRef50_B6JZW3 ATP-dependent RNA helicase Prp16 n=1 Tax=Schizos... 836 0.0 UniRef50_Q759P9 ADR224Wp n=2 Tax=Saccharomycetaceae RepID=Q759P9... 835 0.0 UniRef50_C4QXR9 Putative uncharacterized protein n=1 Tax=Pichia ... 835 0.0 UniRef50_A7ASE9 RNA helicase, putative n=1 Tax=Babesia bovis Rep... 835 0.0 UniRef50_A3FQE8 Putative uncharacterized protein n=2 Tax=Cryptos... 834 0.0 UniRef50_A7AVM7 DEAH box RNA helicase, putative n=3 Tax=Piroplas... 833 0.0 UniRef50_C4JEY7 ATP-dependent RNA helicase DHX8 n=25 Tax=cellula... 832 0.0 UniRef50_D2JWV9 Putative pre-mRNA splicing factor n=1 Tax=Filoba... 831 0.0 UniRef50_C5DJP0 KLTH0F17974p n=2 Tax=Saccharomycetaceae RepID=C5... 830 0.0 UniRef50_B3L2J4 Atp-dependant rna helicase, putative n=1 Tax=Pla... 829 0.0 UniRef50_A9US44 Predicted protein n=1 Tax=Monosiga brevicollis R... 829 0.0 UniRef50_C5X1W0 Putative uncharacterized protein Sb01g037170 n=2... 828 0.0 UniRef50_B0ECA9 Pre-mRNA-splicing factor ATP-dependent RNA helic... 827 0.0 UniRef50_C0H5K5 Splicing factor, putative n=2 Tax=Plasmodium fal... 825 0.0 UniRef50_A2EN72 Helicase, putative n=1 Tax=Trichomonas vaginalis... 825 0.0 UniRef50_Q6FTI2 Strain CBS138 chromosome G complete sequence n=1... 824 0.0 UniRef50_Q03319 Probable ATP-dependent RNA helicase prh1 n=2 Tax... 824 0.0 UniRef50_Q9H5Z1 Probable ATP-dependent RNA helicase DHX35 n=44 T... 821 0.0 UniRef50_Q55CD3 DEAD/DEAH box helicase n=2 Tax=Eukaryota RepID=Q... 820 0.0 UniRef50_D1ZEJ8 Whole genome shotgun sequence assembly, scaffold... 820 0.0 UniRef50_Q0RE57 ATP dependent RNA helicase n=10 Tax=Bacteria Rep... 818 0.0 UniRef50_Q6CF95 YALI0B09053p n=1 Tax=Yarrowia lipolytica RepID=Q... 816 0.0 UniRef50_A5DRX8 Putative uncharacterized protein n=1 Tax=Loddero... 814 0.0 UniRef50_A5AMC2 Putative uncharacterized protein n=2 Tax=Eukaryo... 813 0.0 UniRef50_UPI000186CCEB ATP-dependent RNA helicase, putative n=1 ... 810 0.0 UniRef50_P15938 Pre-mRNA-splicing factor ATP-dependent RNA helic... 807 0.0 UniRef50_A9C368 ATP-dependent helicase HrpA n=13 Tax=cellular or... 807 0.0 UniRef50_B9WL64 Pre-mRNA-splicing factor ATP-dependent RNA helic... 804 0.0 UniRef50_Q5ANN5 Likely spliceosomal DEAD box ATPase n=3 Tax=Euka... 800 0.0 UniRef50_C0W5B9 Putative uncharacterized protein (Fragment) n=1 ... 800 0.0 UniRef50_B9WE17 Pre-mRNA-splicing factor ATP-dependent RNA helic... 796 0.0 UniRef50_Q9H6R0 Putative ATP-dependent RNA helicase DHX33 n=37 T... 796 0.0 UniRef50_A5DQ95 Putative uncharacterized protein n=2 Tax=Pichia ... 794 0.0 UniRef50_Q9VR29 CG3225 n=19 Tax=Neoptera RepID=Q9VR29_DROME 793 0.0 UniRef50_C5LYU2 ATP-dependent RNA helicase DHX8, putative n=1 Ta... 791 0.0 UniRef50_Q5KMH9 Pre-mRNA splicing factor, putative n=4 Tax=Fungi... 790 0.0 UniRef50_B9H2M0 Predicted protein n=9 Tax=Embryophyta RepID=B9H2... 790 0.0 UniRef50_D0MZQ2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 790 0.0 UniRef50_Q9BKQ8 Probable ATP-dependent RNA helicase DHX35 homolo... 789 0.0 UniRef50_D1IUD7 Whole genome shotgun sequence of line PN40024, s... 788 0.0 UniRef50_A7E6W3 Putative uncharacterized protein n=1 Tax=Sclerot... 785 0.0 UniRef50_UPI0001925C54 PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 784 0.0 UniRef50_Q9FZC3 T1K7.25 protein n=12 Tax=Embryophyta RepID=Q9FZC... 784 0.0 UniRef50_Q4N829 RNA helicase, putative n=2 Tax=Theileria RepID=Q... 782 0.0 UniRef50_A8IHD9 DEAH-box nuclear pre-mRNA splicing factor n=2 Ta... 780 0.0 UniRef50_A4S4Y0 Predicted protein n=3 Tax=Mamiellales RepID=A4S4... 773 0.0 UniRef50_B4JQ72 GH13648 n=1 Tax=Drosophila grimshawi RepID=B4JQ7... 771 0.0 UniRef50_C4LWD6 Helicase, putative n=10 Tax=Eukaryota RepID=C4LW... 768 0.0 UniRef50_Q0UY60 Putative uncharacterized protein n=1 Tax=Phaeosp... 765 0.0 UniRef50_A2D7A5 Helicase, putative n=1 Tax=Trichomonas vaginalis... 764 0.0 UniRef50_B6H7B9 Pc16g02360 protein n=34 Tax=Leotiomyceta RepID=B... 764 0.0 UniRef50_B7PNN0 ATP-dependent RNA helicase, putative (Fragment) ... 761 0.0 UniRef50_A2DQS5 Helicase, putative n=1 Tax=Trichomonas vaginalis... 758 0.0 UniRef50_Q9VL25 CG4901 n=10 Tax=Drosophila RepID=Q9VL25_DROME 758 0.0 UniRef50_Q38AN5 Pre-mRNA splicing factor ATP-dependent RNA helic... 757 0.0 UniRef50_Q55EC3 DEAD/DEAH box helicase n=1 Tax=Dictyostelium dis... 755 0.0 UniRef50_B0ECZ2 ATP-dependent RNA helicase, putative n=2 Tax=Ent... 755 0.0 UniRef50_A5E397 Putative uncharacterized protein n=1 Tax=Loddero... 754 0.0 UniRef50_B3SBV6 Putative uncharacterized protein n=2 Tax=Fungi/M... 752 0.0 UniRef50_B0CX49 Predicted protein n=2 Tax=Agaricales RepID=B0CX4... 751 0.0 UniRef50_P20095 Pre-mRNA-splicing factor ATP-dependent RNA helic... 749 0.0 UniRef50_C9ZMN0 ATP-dependent RNA helicase, putative n=4 Tax=Try... 740 0.0 UniRef50_A4RXZ6 Predicted protein n=7 Tax=Eukaryota RepID=A4RXZ6... 740 0.0 UniRef50_UPI0000DB6CD8 PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 738 0.0 UniRef50_A2DDS9 Helicase, putative n=2 Tax=Trichomonas vaginalis... 737 0.0 UniRef50_C3YFD5 Putative uncharacterized protein n=1 Tax=Branchi... 737 0.0 UniRef50_B3LCV7 ATP-dependent RNA helicase, putative n=3 Tax=Pla... 734 0.0 UniRef50_UPI0001792F5D PREDICTED: similar to DEAH (Asp-Glu-Ala-H... 734 0.0 UniRef50_Q8IX18 Probable ATP-dependent RNA helicase DHX40 n=31 T... 734 0.0 UniRef50_C5DCP1 KLTH0B04664p n=2 Tax=Saccharomycetales RepID=C5D... 733 0.0 UniRef50_Q4UH89 ATP-dependent helicase, putative n=2 Tax=Theiler... 732 0.0 UniRef50_C1E1Z9 Predicted protein n=2 Tax=Micromonas RepID=C1E1Z... 731 0.0 UniRef50_B8C4C7 Atp-dependent RNA helicase n=1 Tax=Thalassiosira... 730 0.0 UniRef50_A2F2U1 Putative uncharacterized protein n=2 Tax=Trichom... 729 0.0 UniRef50_P36009 Probable ATP-dependent RNA helicase DHR2 n=16 Ta... 724 0.0 UniRef50_Q22YX8 Putative uncharacterized protein n=1 Tax=Tetrahy... 724 0.0 UniRef50_UPI000050FFFD ATP-dependent helicase n=1 Tax=Brevibacte... 721 0.0 UniRef50_O01598 Putative uncharacterized protein T05E8.3 n=1 Tax... 719 0.0 UniRef50_Q8SQW7 Possible PRE-mRNA SPLICING FACTOR (ATP-DEPENDENT... 718 0.0 UniRef50_A8XFV1 Putative uncharacterized protein n=2 Tax=Caenorh... 718 0.0 UniRef50_D0A429 Pre-mRNA splicing factor ATP-dependent RNA helic... 717 0.0 UniRef50_B6K8E7 Pre-mRNA-splicing factor ATP-dependent RNA helic... 716 0.0 UniRef50_Q2GVT0 Putative uncharacterized protein n=2 Tax=Sordari... 713 0.0 UniRef50_C4Y8X8 Putative uncharacterized protein n=1 Tax=Clavisp... 712 0.0 UniRef50_B5RU49 DEHA2E21340p n=4 Tax=Saccharomycetales RepID=B5R... 712 0.0 UniRef50_D0NMK0 Pre-mRNA-splicing factor ATP-dependent RNA helic... 710 0.0 UniRef50_Q4QAM3 Pre-mRNA splicing factor, putative n=6 Tax=Trypa... 710 0.0 UniRef50_Q4Q2X4 ATP-dependent RNA helicase-like protein n=3 Tax=... 710 0.0 UniRef50_A7AU05 Helicase associated domain containing protein n=... 710 0.0 UniRef50_Q22ZC0 Putative uncharacterized protein n=1 Tax=Tetrahy... 710 0.0 UniRef50_A8PRC9 DEAH, putative n=1 Tax=Brugia malayi RepID=A8PRC... 708 0.0 UniRef50_C8PMN0 ATP-dependent RNA helicase HrpA n=1 Tax=Treponem... 705 0.0 UniRef50_Q4E099 ATP-dependent DEAD/H RNA helicase, putative n=5 ... 704 0.0 UniRef50_A7NAU7 ATP-dependent helicase n=16 Tax=Francisella RepI... 704 0.0 UniRef50_A4RR62 Predicted protein n=3 Tax=Mamiellales RepID=A4RR... 701 0.0 UniRef50_Q3LVV7 Putative pre-mRNA splicing factor n=1 Tax=Bigelo... 700 0.0 UniRef50_Q4Q0J4 RNA helicase, putative n=7 Tax=Trypanosomatidae ... 699 0.0 UniRef50_B2SSX2 ATP-dependent helicase HrpA n=13 Tax=Xanthomonad... 697 0.0 UniRef50_Q9HE06 Putative pre-mRNA-splicing factor ATP-dependent ... 696 0.0 UniRef50_Q87DR2 ATP-dependent helicase n=8 Tax=Xylella fastidios... 693 0.0 UniRef50_A5DZ49 Pre-mRNA splicing factor ATP-dependent RNA helic... 693 0.0 UniRef50_Q8SQQ2 PRE-mRNA SPLICING FACTOR (DEAD box family) n=1 T... 691 0.0 UniRef50_B6H9G3 Pc16g10890 protein n=15 Tax=Leotiomyceta RepID=B... 690 0.0 UniRef50_Q4N5J8 RNA helicase, putative n=1 Tax=Theileria parva R... 689 0.0 UniRef50_A0E003 Chromosome undetermined scaffold_70, whole genom... 687 0.0 UniRef50_B7FZA2 Predicted protein n=1 Tax=Phaeodactylum tricornu... 677 0.0 UniRef50_B6K0W8 Pre-mRNA-splicing factor ATP-dependent RNA helic... 677 0.0 UniRef50_D2A3P7 Putative uncharacterized protein GLEAN_15731 n=1... 676 0.0 UniRef50_B2S1H1 ATP-dependent protease La n=22 Tax=Borrelia RepI... 676 0.0 UniRef50_Q16ZW5 ATP-dependent RNA helicase n=11 Tax=Eukaryota Re... 673 0.0 UniRef50_Q5KNB9 ATP-dependent RNA helicase prh1, putative n=1 Ta... 673 0.0 UniRef50_A0CTF1 Chromosome undetermined scaffold_27, whole genom... 670 0.0 UniRef50_UPI00006CF98F hypothetical protein TTHERM_00419730 n=1 ... 669 0.0 UniRef50_Q9DBV3 Probable ATP-dependent RNA helicase DHX34 n=23 T... 669 0.0 UniRef50_A4ICP7 DEAH-box RNA helicase, putative n=4 Tax=Trypanos... 668 0.0 UniRef50_A5JEL1 Putative uncharacterized protein n=1 Tax=Nosema ... 668 0.0 UniRef50_A0C1Q2 Chromosome undetermined scaffold_142, whole geno... 667 0.0 UniRef50_C1M0G7 ATP-dependent RNA Helicase, putative n=1 Tax=Sch... 666 0.0 Sequences not found previously or not previously below threshold: >UniRef50_P43329 ATP-dependent RNA helicase hrpA n=101 Tax=Bacteria RepID=HRPA_ECOLI Length = 1300 Score = 1763 bits (4568), Expect = 0.0, Method: Composition-based stats. Identities = 1300/1300 (100%), Positives = 1300/1300 (100%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK Sbjct: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG Sbjct: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA Sbjct: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH Sbjct: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE Sbjct: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI Sbjct: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR Sbjct: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ Sbjct: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA Sbjct: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ Sbjct: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL Sbjct: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE Sbjct: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE Sbjct: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA Sbjct: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR Sbjct: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW Sbjct: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW Sbjct: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 Query: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS Sbjct: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 Query: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK Sbjct: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG Sbjct: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED Sbjct: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG Sbjct: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 >UniRef50_B7VPK9 ATP-dependent helicase n=201 Tax=Bacteria RepID=B7VPK9_VIBSL Length = 1355 Score = 1701 bits (4407), Expect = 0.0, Method: Composition-based stats. Identities = 901/1305 (69%), Positives = 1090/1305 (83%), Gaps = 9/1305 (0%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 T+ + + +L++ L M+RDR R S+R+ G K+KN ++ A+F E+A +I ++ Sbjct: 50 TKSSQNSPVSLRKALHECMMRDRFRLSKRITGASKIKNEQSKHAVFDEIALDIAKSMMTA 109 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R A +P I YP+ LPVSQK+ DI +AI ++QVVIVAGETGSGKTTQLPKIC ELGRG Sbjct: 110 TQRAAQKPTIEYPEILPVSQKRDDIAKAIAENQVVIVAGETGSGKTTQLPKICSELGRGR 169 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 GLIGHTQPRRLAAR+VANRIAEE++T+ G +GYKVRF+D +S+NT +KLMTDGILLAE Sbjct: 170 FGLIGHTQPRRLAARSVANRIAEEMETQLGEFVGYKVRFNDQISENTQIKLMTDGILLAE 229 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQ DR L QYDTIIIDEAHERSLNIDF++GYL+ELLP+RPDLK+IITSATIDPERFS+HF Sbjct: 230 IQHDRFLSQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHF 289 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGER 301 NNAPIIEVSGRTYPV+ RYRP+ + D++RDQ++ IF+AVDEL E GDILIFM+GER Sbjct: 290 NNAPIIEVSGRTYPVDTRYRPLGGDDSDSDRDQIEGIFEAVDELCDEGQGDILIFMNGER 349 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 EIRDTAD+L+K NLR TEI+PLYARLS EQNR+FQSH+GRRIVLATNVAETSLTVPGIK Sbjct: 350 EIRDTADSLSKRNLRDTEIVPLYARLSAGEQNRIFQSHTGRRIVLATNVAETSLTVPGIK 409 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVIDPGTARISRYSYRTKVQRLPIEP+SQASANQRKGRCGRV+EGICIRLYSE+DF SRP Sbjct: 410 YVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVAEGICIRLYSEEDFESRP 469 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI------ 475 EFTDPEILRTNLASVILQMTALGLGDI AFPFVEAPDKRNIQDGVRLLEELGAI Sbjct: 470 EFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDKRNIQDGVRLLEELGAIAIVEPS 529 Query: 476 ---TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 + KLT +GR+L++LP+DPRLARMV+EA + C+ E M+I SALSIQDPRE Sbjct: 530 ANKNKNHGDDKKKLTAIGRKLAKLPIDPRLARMVIEAPSNRCLHEVMVIASALSIQDPRE 589 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP DKQQ+SD+KH+RF DKESDF+ FVNLW+Y+ +QQKALSSN FR+ C+ DYLNYLR+R Sbjct: 590 RPSDKQQSSDDKHKRFFDKESDFITFVNLWDYVKQQQKALSSNQFRKQCKQDYLNYLRIR 649 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 EWQD+Y Q+ Q ++EL +N+EP Y IH++LL+GLLSHIGMKD +K EY GARNARF Sbjct: 650 EWQDVYFQIHQAMRELDTKLNTEPGSYDGIHMSLLSGLLSHIGMKDQEKNEYQGARNARF 709 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 IFP SGLFKK PKW+M AELVETS+LWGR+ A+I PEW+EP+A+HLIKR+YSEPHW + Sbjct: 710 HIFPASGLFKKQPKWIMSAELVETSKLWGRVIAKIQPEWIEPLAKHLIKRSYSEPHWSKK 769 Query: 713 QGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKL 772 Q AVMA EKV +YG+PI+ R VNY ID + RELF+R ALVEG+W+T+HAFF++N KL Sbjct: 770 QAAVMAHEKVMLYGIPIIPKRLVNYGAIDATVSRELFVRSALVEGEWETKHAFFKQNRKL 829 Query: 773 RAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEK 832 EVEELEHKSRRRDIL+DD+ LF+FYDQR+ + +S RHFD+WWKK S++TP+LLNFEK Sbjct: 830 LQEVEELEHKSRRRDILIDDDELFDFYDQRVGEEAVSGRHFDTWWKKTSQKTPELLNFEK 889 Query: 833 SMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFE 892 SML + A ++ LDYPNFWHQ +KL+LSYQFEPG D DGVTVHIPLP+LNQ++++GF+ Sbjct: 890 SMLFRGDASHVTDLDYPNFWHQNGIKLKLSYQFEPGDDNDGVTVHIPLPILNQIDQNGFD 949 Query: 893 WQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG 952 WQIPGLR+ELVI+LIKSLPK +RRNFVPAPNYA+AFL RV PLE PLLDSLE+ELRRMTG Sbjct: 950 WQIPGLRQELVISLIKSLPKTLRRNFVPAPNYADAFLARVTPLEAPLLDSLEKELRRMTG 1009 Query: 953 VTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI 1012 V V R+DW DQ+P+HLK+TFR VD + +KLKE + L +LK++LK KVQETLS VADD I Sbjct: 1010 VEVVRDDWKLDQIPEHLKVTFRAVDHRKRKLKEQKDLHELKESLKDKVQETLSKVADDDI 1069 Query: 1013 EQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRR 1072 EQ LH WSFG+LP+ Y+QKRG Y VKA+PALVD +DSV IKLF+ EQ AM +G RR Sbjct: 1070 EQQNLHTWSFGELPKVYQQKRGGYDVKAFPALVDTKDSVEIKLFETEQEQITAMKSGQRR 1129 Query: 1073 LLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEE 1132 L+LLN+PSPIKYLH LPNK+KLGLYFNPYG+VL+LIDDCI+CG+DKLI+ GG VW E Sbjct: 1130 LILLNVPSPIKYLHSNLPNKSKLGLYFNPYGQVLDLIDDCIACGIDKLIEQKGGIVWEPE 1189 Query: 1133 GFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGL 1192 F AL E VRAEL+DTVV+IA+QVE ILT F I+K+LKGRVD++MA LSDIKAQ+ GL Sbjct: 1190 QFEALKEHVRAELDDTVVEIAQQVETILTTAFAISKKLKGRVDLSMAFALSDIKAQIEGL 1249 Query: 1193 VYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLP 1252 +++GF T G+KRL D LRY++AIE+R+EKL +DP++DR M+KV++V +++ +NK+P Sbjct: 1250 IFKGFATECGWKRLPDILRYMKAIERRMEKLPIDPNKDRLHMIKVDSVMNDYKELLNKIP 1309 Query: 1253 PARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 E+VKE+RWMIEELRVS+FAQQLGTPYP+SDKR+ A++ Sbjct: 1310 KGIAVPENVKEVRWMIEELRVSFFAQQLGTPYPVSDKRVKNAIDA 1354 >UniRef50_Q65SL6 HrpA protein n=9 Tax=Pasteurellaceae RepID=Q65SL6_MANSM Length = 1337 Score = 1674 bits (4335), Expect = 0.0, Method: Composition-based stats. Identities = 880/1325 (66%), Positives = 1064/1325 (80%), Gaps = 39/1325 (2%) Query: 10 TALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARP 69 +L ++++ +M+ ++ R R+ G+ ++K +QQA ++ ++I QA ++ LR++A Sbjct: 16 KSLAEQIEDVMIVEQSRLLARIRGLGQIKKEQSQQAAALDIEQQIQQAKLRLELRKSAVK 75 Query: 70 -EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 I +P+NLPVSQ+K +I + I +QVVIVAGETGSGKTTQLPK+C+ELG G KGLIGHT Sbjct: 76 NPIVFPENLPVSQRKTEIQKLIAQNQVVIVAGETGSGKTTQLPKMCLELGFGQKGLIGHT 135 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AAR+VA RIAEE++TE GG +GYKVRF+D + ++T +KLMTDGILLAEIQ DR L Sbjct: 136 QPRRIAARSVAARIAEEMQTELGGIVGYKVRFNDQIGEDTQIKLMTDGILLAEIQTDRFL 195 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 +YD +IIDEAHERSLN DF+LGYLK+LLPRRPDLK+IITSATID ERFS+HFNNAPIIE Sbjct: 196 NRYDCLIIDEAHERSLNNDFILGYLKQLLPRRPDLKVIITSATIDVERFSKHFNNAPIIE 255 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTAD 308 VSGRTYPVEVRYRP+ A+ E+DQLQ I +AVDEL E GDILIF+SGEREIRDTA+ Sbjct: 256 VSGRTYPVEVRYRPV---AETEEQDQLQGILNAVDELQAEGRGDILIFLSGEREIRDTAE 312 Query: 309 ALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGT 368 AL K NLRHTEILPLYARLS EQN++F RIVLATNVAETSLTVPGIKYVIDPGT Sbjct: 313 ALEKQNLRHTEILPLYARLSAQEQNKIFHPGGLNRIVLATNVAETSLTVPGIKYVIDPGT 372 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG+CIRLYSE DF +RPEFTDPEI Sbjct: 373 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGVCIRLYSEQDFNNRPEFTDPEI 432 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE--------- 479 LRTNLASVILQMTALGL DI AFPFV+APDKR+IQDG++LLEELGA + Sbjct: 433 LRTNLASVILQMTALGLDDIEAFPFVDAPDKRHIQDGIKLLEELGAFEWQKSPPSAFGTS 492 Query: 480 --------------------------QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHG 513 + LT GRQL+QLPVDPRLA+M+L A G Sbjct: 493 PRKRGEGNLASNSSLPPFTGGAGHSPEGGKRVLTQTGRQLAQLPVDPRLAKMLLSAVDLG 552 Query: 514 CVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 CV E MII +ALSIQDPRERP +KQQ++D+KHRRF DK+SDFLAF+NLWNY+ EQQK LS Sbjct: 553 CVLEVMIIVAALSIQDPRERPQEKQQSADDKHRRFADKKSDFLAFLNLWNYIQEQQKVLS 612 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSH 633 N FRRLC+ DYLNYLRVREWQDIY Q+R V+E+G+P+NSEPA+Y +IH ALL+GLLSH Sbjct: 613 KNQFRRLCQKDYLNYLRVREWQDIYHQIRLTVREMGLPINSEPAQYPQIHSALLSGLLSH 672 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 IGMK+A+KQ+Y GARNA F+IFP S LFKK PKWVM AELVETS+LWGR+ A IDPEWVE Sbjct: 673 IGMKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMVAEIDPEWVE 732 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 P+A+HLIK +YSEP W +++G V+A EKV++YG+PIVA+R VNY IDP RE+FI+ A Sbjct: 733 PLAKHLIKSSYSEPRWSKSRGQVIANEKVSLYGVPIVASRPVNYGAIDPQTSREIFIQSA 792 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 LVEGDW TRH FF EN KL EVE+LEHKSRRRDILVDD TLFEFYD RI DV+S +HF Sbjct: 793 LVEGDWHTRHKFFFENQKLIREVEDLEHKSRRRDILVDDRTLFEFYDSRIGADVVSQKHF 852 Query: 814 DSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADG 873 DSWWKK +++ P+LLNFEKS L+KE A+K+S+LD+PNFWHQGNLKL+L+YQFEPG DADG Sbjct: 853 DSWWKKAAQQDPELLNFEKSFLMKEDAQKVSQLDFPNFWHQGNLKLKLTYQFEPGTDADG 912 Query: 874 VTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK 933 VTVHIPLPLLNQ+E GF+WQIPGLR EL+++LIK+LPK +RRNFVPAPNYAEAFL RV Sbjct: 913 VTVHIPLPLLNQIEMQGFDWQIPGLRHELIVSLIKALPKSLRRNFVPAPNYAEAFLARVA 972 Query: 934 PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 + PL ++L ELRRMTGV V+ E+W +Q+P HL++TFRV+D+K KK+ E +L +LK Sbjct: 973 NFDKPLTETLSYELRRMTGVNVEVEEWKLEQIPPHLRMTFRVIDEKGKKIAESMNLDELK 1032 Query: 994 DALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAI 1053 LK +VQ+++SAVADDGIEQSG+HIW+F LP+ YEQK+ + VKA+PA+ DE+++V I Sbjct: 1033 FGLKDQVQQSISAVADDGIEQSGIHIWNFDSLPQCYEQKKQGFTVKAFPAITDEKEAVGI 1092 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCI 1113 KLF+ EQ AM GLRRL+LLN+PSPIKYLHEKLPNK+KLGLYF P+GKVL+LIDDCI Sbjct: 1093 KLFETEYEQSVAMQQGLRRLILLNVPSPIKYLHEKLPNKSKLGLYFTPFGKVLDLIDDCI 1152 Query: 1114 SCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGR 1173 +C VDKLI GG VW E F L + VR LN+ VDIA+QVE++LT F INKRLKG+ Sbjct: 1153 ACAVDKLIADFGGFVWNERDFERLRDFVRENLNEITVDIAQQVERLLTLTFEINKRLKGK 1212 Query: 1174 VDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 +D TMA LSDIK+Q+ GL+Y GFV G+ RL D RYLQAI+KR++KLA D +RDRA Sbjct: 1213 MDFTMAFALSDIKSQLAGLIYPGFVEKTGYARLPDIQRYLQAIDKRMDKLAQDINRDRAA 1272 Query: 1234 MLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 ML+VE QQA+QQ + KLP ++ +V EIR+MIEELRVS FAQQLGT YP+S+KR+L Sbjct: 1273 MLRVEQCQQAYQQLLAKLPKSKPLSTEVLEIRYMIEELRVSLFAQQLGTKYPVSEKRVLG 1332 Query: 1294 AMEQI 1298 + +I Sbjct: 1333 VITEI 1337 >UniRef50_P45018 ATP-dependent RNA helicase hrpA homolog n=53 Tax=Bacteria RepID=HRPA_HAEIN Length = 1304 Score = 1656 bits (4289), Expect = 0.0, Method: Composition-based stats. Identities = 903/1304 (69%), Positives = 1076/1304 (82%), Gaps = 11/1304 (0%) Query: 2 TEQQKLTFTALQQ----RLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQA 57 K T T LQQ +L+ +ML D+ R S R+HG+ K+K+ +AQQA+ E+ ++I+QA Sbjct: 3 NSSVKHTLTPLQQSLFSQLNDIMLVDQRRLSARIHGIGKIKSQEAQQAVAAEIQQQIEQA 62 Query: 58 AGKVLLREAA-RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 +V R++A + I +P++LPVSQ+K +I + I +HQV++VAGETGSGKTTQLPK+C+E Sbjct: 63 RLRVEQRKSAVQNPIVFPESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLE 122 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 LG G G+IGHTQPRR+AAR+VA RIAEEL+TE GG +GYKVRF+D +SDNT +KLMTDG Sbjct: 123 LGFGNLGMIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDG 182 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL-PRRPDLKIIITSATIDPE 235 ILLAEIQ DR L QY +IIDEAHERSLN DF+LGYLK+LL RR DLK+IITSATID E Sbjct: 183 ILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVE 242 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILI 295 RFS+HFNNAPIIEVSGRTYPVEVRYRP+V ++ ++DQLQ I +AVDEL E GDILI Sbjct: 243 RFSKHFNNAPIIEVSGRTYPVEVRYRPVV---EEDDQDQLQGILNAVDELQAEGRGDILI 299 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 FM+GEREIRDTA+AL K NL+HTEILPL+ARLS EQN++F RIVLATNVAETSL Sbjct: 300 FMNGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSL 359 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVP IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE+ Sbjct: 360 TVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEE 419 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DF SRPEFTDPEILRTNLASVILQMTALGL DI AFPFV+APD+R+IQDGV+LLEELGA Sbjct: 420 DFNSRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAF 479 Query: 476 TTDEQASAYK--LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 T + S K LT +GRQL+QLPVDPRLA+M+L A GCV E MII SALSIQDPRER Sbjct: 480 ETVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRER 539 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P +KQQASDEKHRRF DK+SDFLAF+NLW YL EQQK S N FRR C+ D+LNYLR+RE Sbjct: 540 PQEKQQASDEKHRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIRE 599 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 WQDIY Q+R V+E+ +P+NSE AEY++IH ALL+GLLSHIG+K+A+KQ+Y GARNA F+ Sbjct: 600 WQDIYHQIRLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFA 659 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 IFP S LFKK PKWVM AELVETS+LWGR+ A I+PEW+EP+A+HLIK++YS P W +++ Sbjct: 660 IFPNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKSYSVPLWSKSR 719 Query: 714 GAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLR 773 GAV+A EKVT+YG+PIVA R VNY IDP + RE+FI+ ALVEG W T+H FF+EN +L Sbjct: 720 GAVIADEKVTLYGVPIVAVRPVNYGAIDPTVSREIFIQSALVEGGWNTKHKFFKENQRLV 779 Query: 774 AEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKS 833 EVEELEHKSRRRDILVDD TLFEFYDQRI +V+S +HFD+WWKK ++ P+LLNFE S Sbjct: 780 REVEELEHKSRRRDILVDDRTLFEFYDQRIGTEVVSQKHFDTWWKKAQQKDPELLNFEHS 839 Query: 834 MLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEW 893 LI + AE++SKLD+PNFWHQGNLKL+L+YQFEPG DADGVTVHIPLPLLNQVE +GF+W Sbjct: 840 FLINDDAEQVSKLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDW 899 Query: 894 QIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGV 953 QIPGLR ELVIALIKSLPK RRNFVPAPNYA+AFL R PLE PLLD+L ELRRMTGV Sbjct: 900 QIPGLREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLIYELRRMTGV 959 Query: 954 TVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIE 1013 TV+ E W+W+Q+P HLK+TFRVVD+ KK+ E +L +LK LK +VQE++SAVADDGIE Sbjct: 960 TVEAEHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKFNLKDRVQESISAVADDGIE 1019 Query: 1014 QSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRL 1073 QSGLHIWSF LP+ YEQK+ + VKA+PA+VDE+D+V IKLF+ EQ AM GLRRL Sbjct: 1020 QSGLHIWSFADLPQCYEQKQRGFSVKAFPAIVDEKDAVGIKLFETEFEQSVAMQQGLRRL 1079 Query: 1074 LLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEG 1133 LLLN+PSPIKYLHEKLPNKAKLGLYF P+G+VL+LIDDCI+C VDKLI GG VW E G Sbjct: 1080 LLLNVPSPIKYLHEKLPNKAKLGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAG 1139 Query: 1134 FAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLV 1193 F L + VR LN+ VDIA++VEQILT + +N+RLKG++D TMA LSDIK+Q+ GLV Sbjct: 1140 FEKLRDFVRENLNEVTVDIAQKVEQILTLTYQLNQRLKGKMDFTMAFALSDIKSQLAGLV 1199 Query: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPP 1253 Y+GFV +G+ RL D RYLQA++KR++KLA D +RDRA ML+VE VQQA+QQ + KLP Sbjct: 1200 YQGFVQKSGYDRLPDLQRYLQAVDKRIDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPK 1259 Query: 1254 ARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 ++ ++V EIR+MIEELRVS FAQQLGT Y ISDKRI + Q Sbjct: 1260 SKPISDEVAEIRYMIEELRVSLFAQQLGTKYQISDKRIGNIISQ 1303 >UniRef50_Q3JBJ6 ATP-dependent helicase HrpA n=3 Tax=Chromatiaceae RepID=Q3JBJ6_NITOC Length = 1281 Score = 1641 bits (4251), Expect = 0.0, Method: Composition-based stats. Identities = 651/1291 (50%), Positives = 874/1291 (67%), Gaps = 22/1291 (1%) Query: 20 MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV 79 M RD+ R RRL + K + + + I+ + R++ P + +LPV Sbjct: 1 MQRDQHRLKRRLQRLTKGNS----SYNLGHLTQAIEDSRLWREQRQSQLPRPAFEQSLPV 56 Query: 80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA 139 +++++I AIR+HQVVI+ GETGSGKTTQLPKIC+ELGRG+ G+IGHTQPRR+AARTVA Sbjct: 57 IERREEIGAAIRNHQVVILCGETGSGKTTQLPKICLELGRGVAGMIGHTQPRRIAARTVA 116 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 NRIA+EL ++ G +GYKVRF D VS +T +KLMTDGILLAE Q DR L QYDT+IIDEA Sbjct: 117 NRIAKELNSDLGQIVGYKVRFHDQVSPSTYIKLMTDGILLAETQGDRFLDQYDTLIIDEA 176 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR 259 HERSLNIDFLLGYLK+LLP+RPDLK+IITSATID ERFS+HF APIIEVSGRTYPVE+R Sbjct: 177 HERSLNIDFLLGYLKQLLPKRPDLKVIITSATIDTERFSQHFGQAPIIEVSGRTYPVEIR 236 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTE 319 YRP+ E + ER+ + I DAVDELS+ GDIL+F+ GEREIR+TA+AL K + HTE Sbjct: 237 YRPLCGEQETQERNLSEGILDAVDELSRLGPGDILVFLPGEREIRETAEALRKHHPPHTE 296 Query: 320 ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK 379 ILPLYARLS++EQNRVF+ HSGRRIVLATNVAETSLTVPGI YV+DPG AR+SRYS R+K Sbjct: 297 ILPLYARLSSTEQNRVFKPHSGRRIVLATNVAETSLTVPGIHYVVDPGLARLSRYSVRSK 356 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ 439 VQRLPIE ISQ+SANQR GRCGRV+ G+CIRLYSE+DFL RPEFTDPE+LRTNLASVILQ Sbjct: 357 VQRLPIEKISQSSANQRAGRCGRVATGVCIRLYSEEDFLGRPEFTDPEVLRTNLASVILQ 416 Query: 440 MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD 499 M +L LG + FPF++ P + I DG+RLL ELGA+ + LTPLG++L++LP+D Sbjct: 417 MKSLQLGAVEDFPFLDPPLPKMINDGLRLLAELGAVDKAQN-----LTPLGQRLARLPID 471 Query: 500 PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV 559 PR+ RMVL + C+ E +II SALSIQDPRERP++ QQA+DE H RF D+ SDFL+++ Sbjct: 472 PRIGRMVLAGDEFHCLSEMLIIASALSIQDPRERPLEAQQAADEAHSRFQDERSDFLSYL 531 Query: 560 NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY 619 LW L Q+ LS N R CR +L+YLR+REW+DI+ QL+ + +G N AEY Sbjct: 532 KLWEDLHRQRARLSQNKLRAYCREHFLSYLRLREWRDIHQQLKLLATNIGFRPNQVAAEY 591 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL 679 IH ALLTGLL +I +K +K Y GARN + IFPGS LFKK PKW+M AELVETSRL Sbjct: 592 GAIHRALLTGLLGNIAVKS-EKDHYLGARNIKLQIFPGSALFKKSPKWIMAAELVETSRL 650 Query: 680 WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ 739 + R A +I+PEW+E +A HL+KR+Y +PHWE+ V+A E++T+YGL ++ R+++Y Sbjct: 651 YARCAGKIEPEWLEALALHLVKRSYFDPHWEKRPAQVIAYERITLYGLTVIPKRRIHYGP 710 Query: 740 IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY 799 ++P RE+FIR ALV GD+ T+ FFR N KL AE+EELEHKSRRRD+L+D+++L++FY Sbjct: 711 VNPEEAREIFIREALVNGDYDTQAPFFRHNQKLIAEIEELEHKSRRRDVLIDEQSLYQFY 770 Query: 800 DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL 859 ++R+ V + F W ++ ++ P LL + L++ A++I+ + +P+ L L Sbjct: 771 EERLPAGVYNGAGFKKWRQQAEKKNPQLLFLSREELMRHDAKEITGVRFPDQMTVKGLPL 830 Query: 860 RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV 919 LSY FEPG ADGVT+ +PL +LNQ+E S F+W +PGL +E +I LIK+LPK +RRNFV Sbjct: 831 ALSYHFEPGHPADGVTLTVPLAVLNQLEASHFQWLVPGLLKEKIICLIKALPKGLRRNFV 890 Query: 920 PAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK 979 P P++AEA + + P + PLLD L R L+ MTGV + W +P HL++ FR+VD+K Sbjct: 891 PVPDFAEACIRALSPAQGPLLDRLARHLQSMTGVPLSATCWQEVDLPLHLQMNFRLVDEK 950 Query: 980 NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK 1039 +K+L GR L L+ K Q + + + + G+ W FG+LPE E +R K+K Sbjct: 951 DKELATGRDLAILQRQWASKAQRSFRGWDNSELTREGITQWDFGELPERIELERQGLKLK 1010 Query: 1040 AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF 1099 +PAL D +V++ + D+ ++ GLRRL +L + IKYL + LP K+ L++ Sbjct: 1011 GYPALQDTETAVSLVIMDSAEAAQEITHLGLRRLFMLALTQQIKYLRKNLPGIQKMCLHY 1070 Query: 1100 NPYG------------KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELND 1147 L D I +D+ + PV E F A EK EL Sbjct: 1071 TSLPAMPWGDSAPSQSSCESLKDALIQGIIDRTFILDHPPVRNGEKFMARKEKGCGELMS 1130 Query: 1148 TVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLG 1207 T + + +E+ILT + ++LKG + + D+K Q+ LVY GF+ L Sbjct: 1131 TANEFCRLIEEILTEYHEVVRQLKGNLPFAWLNSIRDMKEQLTHLVYHGFINQTSPIWLI 1190 Query: 1208 DTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWM 1267 RYL+ I+ RL KL +P RD+ + ++ + QA+Q+ + ++ RWM Sbjct: 1191 HLPRYLKGIKLRLAKLQENPRRDQQRQAEITPLWQAYQKRMEIQHQEDGVVPALETYRWM 1250 Query: 1268 IEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +EE R+S FAQ+LGT P+S KR+ ++I Sbjct: 1251 LEEYRISLFAQELGTKRPVSPKRLAAQWKEI 1281 >UniRef50_Q47MH0 ATP-dependent helicase HrpA n=13 Tax=Bacteria RepID=Q47MH0_THEFY Length = 1324 Score = 1640 bits (4247), Expect = 0.0, Method: Composition-based stats. Identities = 807/1316 (61%), Positives = 1009/1316 (76%), Gaps = 19/1316 (1%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 T K F L++RL LM RDR R RR+ G +K+++PD ++A+ E++ +ID +V Sbjct: 3 TPSVKSPFADLRRRLPGLMPRDRHRLRRRIDGAEKIRDPDRRRAVAAEISADIDTCEARV 62 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R +A P I YP LPVSQKK +IL AIRDHQVVIVAGETGSGKTTQLPKIC+ELGRG+ Sbjct: 63 ERRRSAFPAIDYPAELPVSQKKDEILAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGV 122 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G IGHTQPRRLAARTVA RIAEEL T G +GYKVRF+D SD+T+VKLMTDGILLAE Sbjct: 123 LGQIGHTQPRRLAARTVAARIAEELGTTLGEWVGYKVRFTDVSSDDTLVKLMTDGILLAE 182 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQQDR+L YDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+IITSATIDPERFSRHF Sbjct: 183 IQQDRMLRAYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVIITSATIDPERFSRHF 242 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEE---------ADDTERDQLQAIFDAVDELSQESHGD 292 +NAPI+EVSGRTYPVEVRYRP+ E A +RDQ+Q I DAVDEL E GD Sbjct: 243 DNAPIVEVSGRTYPVEVRYRPLTAEQVVDDEDTVAATDDRDQIQGICDAVDELCAEGPGD 302 Query: 293 ILIFMSGEREIRDTADALNKL--------NLRHTEILPLYARLSNSEQNRVFQSHSGRRI 344 IL+F+SGEREIRDTA+AL K + + EILPLYARLS +EQ RVFQ RRI Sbjct: 303 ILVFLSGEREIRDTAEALGKHLARRYPEGSPQAVEILPLYARLSAAEQQRVFQPRGKRRI 362 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VLATNVAETSLTVPGI+YV+DPGTARISRYS+RTKVQRLPIE ISQASANQRKGRCGRV+ Sbjct: 363 VLATNVAETSLTVPGIRYVVDPGTARISRYSHRTKVQRLPIERISQASANQRKGRCGRVA 422 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 EGICIRLYSE+DFLSRPEFT+PEILRTNLASVILQM ALGLGD+ FPFV+ PD+R ++D Sbjct: 423 EGICIRLYSEEDFLSRPEFTEPEILRTNLASVILQMAALGLGDVEEFPFVDGPDRRQVKD 482 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 GV LL ELGA+ + ++LT LGR L+QLP+DPRL RMV+EA ++GC+ E M+I +A Sbjct: 483 GVALLTELGALQP-AKDGRHRLTALGRTLAQLPIDPRLGRMVVEADRNGCLHEVMVIAAA 541 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LSIQDPRERP+++QQA+ +KH RF +SDFLA++NLWNYL E+Q+ LS N FR++CR + Sbjct: 542 LSIQDPRERPVEQQQAAAQKHARFAVPDSDFLAYLNLWNYLNERQQELSGNQFRKMCREE 601 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 +LNYLRVREWQDIY QLRQ+V+ LG+ VN+ PA+ + IH++LL GLLSHIG+KD +K EY Sbjct: 602 FLNYLRVREWQDIYAQLRQIVQSLGMKVNTAPADAKRIHLSLLAGLLSHIGLKDPEKHEY 661 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 GAR ARF+IFPGS LFKK P+WVM AELVETSRLW R+ ARI+PEWVE +A HL+KRTY Sbjct: 662 LGARGARFAIFPGSALFKKQPRWVMSAELVETSRLWARVNARIEPEWVEELAGHLVKRTY 721 Query: 705 SEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHA 764 SEPHWE+ +GAVMA E+VT+YG+PIV RKV+Y +IDP RELFIRHALV+G+W TRHA Sbjct: 722 SEPHWEKKRGAVMAYERVTLYGVPIVTQRKVDYGRIDPKTARELFIRHALVQGEWDTRHA 781 Query: 765 FFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRET 824 FFR N KL EVEELEH+ RRRDILVDD+ LF+FYDQR+ +V+S RHFDSWWK+V ++ Sbjct: 782 FFRRNQKLLQEVEELEHRVRRRDILVDDDVLFDFYDQRVGAEVVSVRHFDSWWKRVRQQQ 841 Query: 825 PDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLN 884 P LL+F+KSML+ E A + + YP+FW QG + RL+YQFEPG ADGVTVHIPL +LN Sbjct: 842 PRLLDFDKSMLVAEDAGEGIEEAYPDFWQQGEHRFRLTYQFEPGDAADGVTVHIPLNVLN 901 Query: 885 QVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLE 944 QV GF+WQIPGLR ELV+AL++SLPK +RR+FVP PNYA L R+KP PLL++L Sbjct: 902 QVSPEGFDWQIPGLREELVVALMRSLPKAIRRSFVPVPNYAADVLKRLKPYSEPLLEALS 961 Query: 945 RELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETL 1004 REL M G V +DW D+VPD+L++TFR VDDK + L E + L++L+ L+ ++++ + Sbjct: 962 RELTAMGGPRVTVDDWQLDRVPDYLRMTFRAVDDKGRTLAEAKDLEELRRRLQPRLRKAI 1021 Query: 1005 SAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQ 1064 SA A IE++GL W FG LP ++E++ + V+ +PALVDE +V +++FDN Q+Q Sbjct: 1022 SAEA-ASIERTGLTSWDFGPLPRTFERRTAGHIVRGYPALVDEGTTVGVRIFDNAAAQQQ 1080 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 AM G RRLL+L +PSP K+L L N+ L +P+G V L DDCI C VD L+ Sbjct: 1081 AMVAGTRRLLMLTVPSPAKFLRGHLSNQTTLVFSRSPHGSVAALFDDCIGCAVDSLVAEA 1140 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 GGPVW E FA L E VR L + V+++ VE+IL + K+LK + + ++D Sbjct: 1141 GGPVWDPESFAKLREHVRVNLVERVMELLPVVEKILATAQRVEKQLKSVTSLAVLPSITD 1200 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 I+ Q+G L+ GFVT G++RL D RYL+AIE RLE+L +P RD+ M K+E ++QA+ Sbjct: 1201 IQNQLGALIGPGFVTAAGYQRLRDLTRYLKAIEVRLERLPRNPRRDQVNMAKIEQLRQAY 1260 Query: 1245 QQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 QQ +++LPP + IRWM+EELR+SYFAQ++GT Y +S+KR+L+A+ ++ Sbjct: 1261 QQLLDRLPPGVPPGPAHENIRWMLEELRISYFAQEVGTAYSVSEKRVLKAISEVEA 1316 >UniRef50_A4X5M6 ATP-dependent helicase HrpA n=6 Tax=Actinomycetales RepID=A4X5M6_SALTO Length = 1339 Score = 1586 bits (4108), Expect = 0.0, Method: Composition-based stats. Identities = 783/1335 (58%), Positives = 1001/1335 (74%), Gaps = 36/1335 (2%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + L +RL LMLRD+ R RRL G +++ +P ++ E+ ++ +A + Sbjct: 5 VASTPPDATRELHRRLRPLMLRDQHRLRRRLDGARRIPDPQRRETALAEITTDVVRAEAR 64 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 + +R+AA P ITYP LPVS ++ +I AIRDHQVVIVAGETGSGKTTQLPKIC+ELGRG Sbjct: 65 LAVRQAAVPAITYPAMLPVSDRRDEIAAAIRDHQVVIVAGETGSGKTTQLPKICLELGRG 124 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 + GLIGHTQPRRLAARTVA+RIAEEL TE G +GY+VRF+D VSD ++VKLMTDGILLA Sbjct: 125 VHGLIGHTQPRRLAARTVADRIAEELGTELGEVVGYQVRFADQVSDRSLVKLMTDGILLA 184 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E+Q DR+L QYDTII+DEAHERSLNIDF+LGYL++LLPRR DLK+IITSATI+ +RF+RH Sbjct: 185 ELQHDRMLRQYDTIIVDEAHERSLNIDFILGYLRQLLPRRRDLKVIITSATIETDRFARH 244 Query: 241 F-----NNAPIIEVSGRTYPVEVRYRPIVEEADDT-------ERDQLQAIFDAVDELSQE 288 F N AP++EVSGRTYPVEVRYRP+VE +D RDQ+QAI DAV EL+ E Sbjct: 245 FADADGNPAPVVEVSGRTYPVEVRYRPLVEVGEDEDDTDEEQVRDQVQAIGDAVQELATE 304 Query: 289 SHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRR 343 GDIL+F+SGEREIRDTADAL KL LR+TEILPLYARLS +EQ+RVF H+GRR Sbjct: 305 GPGDILVFLSGEREIRDTADALGKLVAHRPTLRNTEILPLYARLSTAEQHRVFAPHTGRR 364 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 +VLATNVAETSLTVPGI+YV+DPGTARISRYS R KVQRLPIEP+SQASANQR GRCGR Sbjct: 365 VVLATNVAETSLTVPGIRYVVDPGTARISRYSNRLKVQRLPIEPVSQASANQRTGRCGRT 424 Query: 404 SEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 S+GICIRLY E DF SRPEFTDPEILRTNLASVILQMTA+GLGDIAAFPF++ PD+R I Sbjct: 425 SDGICIRLYDEPDFQSRPEFTDPEILRTNLASVILQMTAIGLGDIAAFPFIDPPDRRTIT 484 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 DGV LL ELGA+ E A +LTPLGR+L+QLPVDPRLARMVLE +++GC E ++I + Sbjct: 485 DGVNLLHELGALNPTETDPAKRLTPLGRRLAQLPVDPRLARMVLEGERNGCATEVVVIAA 544 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 ALSIQDPRERP+DKQ +D+ H RF D+ESDF+A++NLW +L EQQ+A SS+ FRR+CR+ Sbjct: 545 ALSIQDPRERPVDKQAQADQAHARFADQESDFVAYLNLWRHLREQQRARSSSGFRRMCRS 604 Query: 584 DYLNYLRVREWQDIYTQLRQVVK------------------ELGIPVNSEPAEYREIHIA 625 +YLNYLRVREWQDI +QLRQ ++ G E + ++H + Sbjct: 605 EYLNYLRVREWQDIVSQLRQALRTPERSRRRGGPATDGGERRGGGADLPEEIDTPKVHQS 664 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 LL GLLSH+G+KD + EY GAR A+F++FPGS L KKPP+WVM AELVET+RLWGR+ Sbjct: 665 LLAGLLSHVGLKDTQRHEYLGARGAKFALFPGSALAKKPPRWVMAAELVETTRLWGRVNG 724 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 R++PEWVEP+AQHL+KR+YSEPHWE+ Q AVMA EKVT+YG+PIV++RKVN+ +IDP + Sbjct: 725 RVEPEWVEPLAQHLVKRSYSEPHWEKRQAAVMAVEKVTLYGVPIVSSRKVNFGRIDPVVS 784 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 RELFIRHALVEGDWQT H F+R+N +L EV ELE++ RRRDILVDDET+F+FYD+R+ Sbjct: 785 RELFIRHALVEGDWQTHHQFWRDNQQLLDEVTELENRVRRRDILVDDETIFQFYDERVPA 844 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 +V+S RHFD+WWK+ R+ PDLL F + +L+ G + ++ YP+ W ++L L+Y+F Sbjct: 845 EVVSGRHFDAWWKRERRQRPDLLTFTRDLLVNAGRGGVDEVGYPDEWRADGVRLPLTYRF 904 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 +PG ADGVTV IPLPLLNQV F+WQ+PGLR ELVIALI+SLPK VRRNFVP P+YA Sbjct: 905 DPGTPADGVTVDIPLPLLNQVPAESFQWQVPGLREELVIALIRSLPKAVRRNFVPVPDYA 964 Query: 926 EAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 985 A L + P E LLD+L R+LRRMTGVTV R+ W ++P HL++TFRV+ + ++ + E Sbjct: 965 RAVLAELPPGEEDLLDALTRQLRRMTGVTVPRDAWDLGKLPPHLRVTFRVLGEDDRPVAE 1024 Query: 986 GRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALV 1045 + L L+ L +V++ ++A A D + +SGL W G LP + EQ R Y V A+PALV Sbjct: 1025 SKDLPALQRELTAEVRQVVAAAAPD-VTRSGLTDWEIGALPRTVEQVRAGYAVTAYPALV 1083 Query: 1046 DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV 1105 DE +V +++FD+P EQ+ A W G RRLL L PSP K+L +L N+AKL L NP+G V Sbjct: 1084 DEGATVGVRVFDSPAEQEAAHWAGTRRLLRLTAPSPAKFLQGRLSNEAKLALSRNPHGGV 1143 Query: 1106 LELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 LI+D +DKLI GGP W +G+AAL VR L +TVV++ ++V +L A + Sbjct: 1144 PALIEDAAGAALDKLIADAGGPAWDADGYAALRSTVRTGLVETVVEVMERVRGVLAAGYA 1203 Query: 1166 INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV 1225 I +RL ++ + L+D+++Q+ GL++ GF+T G+ RL D RYL AIE+RL++L Sbjct: 1204 IEQRLGATRNLAVVAALADVRSQLTGLIHPGFITEAGYPRLPDLRRYLTAIERRLDRLPG 1263 Query: 1226 DPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYP 1285 +P RD+ Q ++ VQ+ + + LPPA+R V++IRWMIEELRV+ FAQ LGTPYP Sbjct: 1264 NPARDKQQQDRIAVVQREYADLLAALPPAKRRTVAVRQIRWMIEELRVNVFAQALGTPYP 1323 Query: 1286 ISDKRILQAMEQISG 1300 +S++RI +AM+ Sbjct: 1324 VSEQRIYRAMDNAEA 1338 >UniRef50_B9Z2A4 ATP-dependent helicase HrpA n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2A4_9NEIS Length = 1314 Score = 1567 bits (4059), Expect = 0.0, Method: Composition-based stats. Identities = 596/1321 (45%), Positives = 846/1321 (64%), Gaps = 39/1321 (2%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 L+ L S ++RDR R+L V +++K + ++A++I ++ G+ R Sbjct: 5 RPLAELKAALPSCLIRDRHGLKRKLADVEQRLKKQQPTDKLLADVAQQIARSQGRAEARS 64 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 A P+ + LPV+QK+++I AI HQVVI+ GETGSGKTTQ+PKIC+ELGRG+ GLI Sbjct: 65 ANLPKPEFDLALPVNQKREEIRAAIAKHQVVIICGETGSGKTTQIPKICLELGRGVYGLI 124 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRRLAAR+VA RIA+EL +E G +G+KVRF+D +SD +++KLMTDGILLAE Q D Sbjct: 125 GHTQPRRLAARSVATRIAQELGSELGAHVGFKVRFTDKLSDKSVIKLMTDGILLAETQTD 184 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 R L YDTIIIDEAHERSLNIDFLLGYLK++LPRRPDLK+I+TSATID ERF+RHF+ AP Sbjct: 185 RYLEAYDTIIIDEAHERSLNIDFLLGYLKQMLPRRPDLKVIVTSATIDAERFARHFDGAP 244 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIR 304 +IEVSGRT+PVEVRYRP+ E +D +++ AI DAVDE+S+ GD+L+F+ GEREIR Sbjct: 245 VIEVSGRTFPVEVRYRPLKERDEDEREVEMEDAIVDAVDEISRHGPGDMLVFLPGEREIR 304 Query: 305 DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVI 364 DTA+ L K +R EILPL+ARLSN +Q ++F+ GRRIVLATNVAETSLTVPGIKYVI Sbjct: 305 DTAEKLRKSGIRGYEILPLFARLSNEDQQKIFKPSGGRRIVLATNVAETSLTVPGIKYVI 364 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G AR++RYS R KV++L +E ISQA+A QR GRCGRV G+C+RLY EDDF +RP FT Sbjct: 365 DTGLARLNRYSPRAKVEQLQVEKISQAAARQRAGRCGRVEAGVCVRLYGEDDFNARPAFT 424 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 DPEI+R+NLA+VIL+M AL LG + FPF+EAP R I DG ++L ELGA+ + Sbjct: 425 DPEIVRSNLAAVILRMAALRLGRVDDFPFLEAPSSRLIADGYQVLTELGAVDEKSE---- 480 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LTP+G++L++LP+DP++ RM+L A+ GCVRE +II +ALSIQDPRERP + ++A++ Sbjct: 481 -LTPVGKELARLPIDPKIGRMLLAARDLGCVREVLIIAAALSIQDPRERPFEAREAAERA 539 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 ++F D++SDFL+F++LW++ + + S+ LC +L+YLR+REW++++ QL + Sbjct: 540 QQKFADEKSDFLSFLHLWDFFQDALKHKKSNRQLINLCHEHFLSYLRMREWRELHGQLAE 599 Query: 604 VVKELGIPVNSEP-----------------------AEYREIHIALLTGLLSHIGMKDAD 640 + E+G+ E Y +H ALLTGL+ ++GMK + Sbjct: 600 IAAEMGLIQRHEAHADAEPSANLEQLSVKKRQQLDAVAYERLHQALLTGLIGNLGMKSQE 659 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 +Y G R F +FPGSGL K PKW++ AELVET++L+ R +++PEWVE +A HLI Sbjct: 660 SDDYLGTRGVHFHVFPGSGLKKAKPKWLVAAELVETTKLYARCVGKVEPEWVEKLAPHLI 719 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 K Y +PHWE+ +G V+A+E+VT+YGL +V R V+Y +I P RELFIR ALV ++ Sbjct: 720 KYHYFDPHWEKTRGEVVASERVTLYGLTLVPRRPVSYGRIAPEEARELFIRGALVAMEYA 779 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 + +F+ N +L EVE+LEHK+RR+D+LVD++ LF FY +RI V+ A F++W K+ Sbjct: 780 SNAPWFQRNQQLIREVEQLEHKARRQDVLVDEDALFAFYAERIPAHVVDAASFEAWRKEA 839 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 + P L + L++ A+ ++ +P + + KLRL Y+FEP DGVTV +PL Sbjct: 840 EQADPKRLFLTREELMRHAAQHVTVNQFPEWLEHEDGKLRLKYRFEPNHPLDGVTVDVPL 899 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 +LN++E + FEW +PG+ RE + +IKSLPK VRR VP P++ FL P+ Sbjct: 900 AILNRLEPAPFEWLVPGMIREKLQLMIKSLPKQVRRTCVPVPDFVTRFLSANPDTTQPIA 959 Query: 941 DSLERELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGK 999 L R + R T GV V +D+ +P HL FRV+DD +++ GR L L+ Sbjct: 960 PQLARFILRETGGVKVAVDDFDLATLPAHLLFNFRVIDDGKQEIGLGRDLLALQKQFGQA 1019 Query: 1000 VQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP 1059 Q T E+ + W FG+LP + + RG ++ +PAL E D VAI+L+D Sbjct: 1020 AQLTF-RDTSAEFERDDVTSWDFGELPAAIQFARGRQQLTGYPALTLETDKVAIRLYDTE 1078 Query: 1060 LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDK 1119 ++A G+ RLL L + +K L + LP +LGL + +L+ D I+C D+ Sbjct: 1079 YAAQRAHRQGVVRLLQLQLKEQMKQLGKGLPGMTQLGLQLRGVANIDDLLADAIACICDR 1138 Query: 1120 LIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMA 1179 + P TE+ F + R L + + + QI + +L Sbjct: 1139 AFIGDDEPPRTEKAFNDQKARARTRLPAVIQAVTAYLNQIAGEYQALQPKLAKH------ 1192 Query: 1180 LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN 1239 ++ Q+G LVY+GF++ + +L RYL+A+ R++K + RD + ++ Sbjct: 1193 KLGRELTEQLGRLVYKGFLSATPWSQLPHLPRYLKAMSLRMDKQVANAQRDGQRAAEIRQ 1252 Query: 1240 VQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + W+ + + + E RW IEELRVS FAQ+L TPYP+S KR+++ E IS Sbjct: 1253 LWTLWETRLAEAEDKGEATPALAEFRWKIEELRVSLFAQELKTPYPVSLKRLMKEWESIS 1312 Query: 1300 G 1300 G Sbjct: 1313 G 1313 >UniRef50_A1U107 ATP-dependent helicase HrpA n=4 Tax=Gammaproteobacteria RepID=A1U107_MARAV Length = 1312 Score = 1566 bits (4055), Expect = 0.0, Method: Composition-based stats. Identities = 617/1302 (47%), Positives = 869/1302 (66%), Gaps = 20/1302 (1%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + A+ +LD+ ++ R RR+ K + ++MA+ +DQ KV R Sbjct: 19 SRAAVKAMMNQLDACNQQEVARIIRRVSRCK----GNPGNKDLEKMAQWLDQGLDKVRKR 74 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 +A T+P LPVS + +DI +AI +HQVVI+AGETGSGKTTQ+PKIC+ LGRGI+G+ Sbjct: 75 QALHKPATFPAGLPVSDRVEDISDAINNHQVVIIAGETGSGKTTQIPKICLNLGRGIRGI 134 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRR+AAR+V++RIAEEL G IGY+VRF+D+ S+++ VK+MTDGILLAE+Q Sbjct: 135 IGHTQPRRIAARSVSSRIAEELGETVGQQIGYQVRFTDNTSESSRVKVMTDGILLAEVQH 194 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 DR L +YDT+IIDEAHERSLNIDFLLGYLK+LLP+RPDLK+IITSATI+ ERFS FN A Sbjct: 195 DRFLDRYDTLIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSATIEVERFSEFFNEA 254 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ------ESHGDILIFMS 298 P+IEVSGRT+PV++RYRP+V + DD ++ + A+DE+ Q + GD+L+F+ Sbjct: 255 PVIEVSGRTFPVDIRYRPLVGDEDDRDQGWTDGVLSALDEIEQHERQEKQPPGDVLVFLP 314 Query: 299 GEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVP 358 GEREIR + L +LRHTE+LPLY+RLSN EQNRVFQ H GRRIVL+TNVAETSLTVP Sbjct: 315 GEREIRALSKVLRHADLRHTEVLPLYSRLSNQEQNRVFQGHKGRRIVLSTNVAETSLTVP 374 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI+YVID G ARISRYS R+K+QRLPIEPISQASANQR GRCGRV+ GIC RLY E DFL Sbjct: 375 GIRYVIDTGVARISRYSVRSKIQRLPIEPISQASANQRAGRCGRVAPGICFRLYDETDFL 434 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 +RPE+TDPEILRTNLASVILQM GLG+I FPF+EAPD+R + DG +LLEEL A+ Sbjct: 435 NRPEYTDPEILRTNLASVILQMATSGLGEIRHFPFLEAPDRRQVNDGYKLLEELSAVDDK 494 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 ++T LGR +++LP+DPRLARM++ + + G + E +I+ + LS+QDPRERP DKQ Sbjct: 495 -----RRVTRLGRTMARLPLDPRLARMLVTSAEQGSLAEVLIVIAGLSVQDPRERPQDKQ 549 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 QA+D+ H F+DKESDF +N+WN+ EQ++ LS N ++LC+ +L+++R+REW+DI+ Sbjct: 550 QAADQAHAPFNDKESDFATLLNIWNWFEEQRQELSQNQLKKLCQKTFLSWMRMREWRDIH 609 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QL + +E + +NS+PA Y +H A+L GLL + +K +K+EY RN + IFPGS Sbjct: 610 RQLTLICREQKLTLNSQPANYDAVHKAILGGLLGQVAVK-VEKREYLATRNRKVMIFPGS 668 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 + K PKW++ AE+VETS+++ R+ A I PEWVEP+A H++K Y EPHWE+ + VM Sbjct: 669 KVGKTAPKWIVAAEIVETSKVFARMVAAIQPEWVEPLAGHVVKHHYFEPHWEQKRAQVMG 728 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 EKVT+YGL +V R++ Y+++DPA CR LFIR ALVEGD+Q+R F N ++ VE Sbjct: 729 YEKVTLYGLDVVPKRRIPYAKVDPAECRNLFIRRALVEGDFQSRAPFIARNREMLDTVEN 788 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE K+RRRD+LVDDE L FYDQR+ D++S RHF+SWWK +S E L ++ +++ Sbjct: 789 LEKKTRRRDLLVDDEVLVAFYDQRLPSDIVSGRHFESWWKGLSAEELKKLELTETDVLQR 848 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 ++ S YP++ +K LSY+FEP ++ DGVT+++PL L Q+ EW +PGL Sbjct: 849 PLDETSAQQYPDYLEWEGVKYPLSYEFEPTSERDGVTLNVPLMALRQIPARRLEWLVPGL 908 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958 RE IAL+K LPK +RRNFVP P++ +A L ++P PL L +LRRMTGV +D + Sbjct: 909 LREKCIALVKGLPKALRRNFVPVPDFVDAALANLQPGNEPLAIKLGEQLRRMTGVQIDPD 968 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI---EQS 1015 W +++P HL++ RV DK K + E R +L+ L+G+ +E L++ D + Sbjct: 969 AWPEEELPRHLRMNLRVTGDKGKVIAESRDTDELQARLEGRAEEALASATRDEPGKKQAG 1028 Query: 1016 GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLL 1075 W FG PE + ++G +V +PAL D + V + L + G+ RL++ Sbjct: 1029 EYTDWQFGTFPEQVQTEKGGMQVTVYPALEDLGNKVRASRCLDKLTAEDTHRRGVARLIV 1088 Query: 1076 LNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFA 1135 + + L KLP + L F P G+ L+DD + V + A+ TE+ FA Sbjct: 1089 NRFGNTLADLERKLPRFKQSALMFAPIGQAKGLLDDLVLSTVMQHFLADQ-LPRTEQAFA 1147 Query: 1136 ALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYR 1195 L ++ R + + +++ Q + + K+LKG++++ +A ++D+K Q+ LV Sbjct: 1148 ELFDRHRGDFIPALEAADERLFQAMNGYQKVAKQLKGKINLALAASMADLKFQLQHLVSP 1207 Query: 1196 GFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR 1255 GF+ + L Y +A + RLEK+A + R+R + +E + + + + Sbjct: 1208 GFLVNTPVQWLERFGTYFEAADIRLEKMAREMGREREFLHTIEPLWARYAAKLEQQKRQG 1267 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 D +++ RWM+EE RVS+FAQQLGT +S KR+ + E+ Sbjct: 1268 VRDPELETYRWMMEEFRVSFFAQQLGTVMTVSAKRLDKQWEK 1309 >UniRef50_B5GG28 ATP-dependent helicase n=3 Tax=Streptomyces RepID=B5GG28_9ACTO Length = 1333 Score = 1564 bits (4051), Expect = 0.0, Method: Composition-based stats. Identities = 784/1327 (59%), Positives = 989/1327 (74%), Gaps = 31/1327 (2%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 + T L RL L RD R RRL G ++V+ P+A+ A+ E+ EI +A ++ Sbjct: 4 SPAPAPTSADLAPRLALLAPRDAQRLGRRLEGTRRVRKPEARSAVLAEIEAEITKAEERL 63 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R A PE+ YP LPVS KK DI +AIR HQVVIVAGETGSGKTTQ+PKIC+ELGRG+ Sbjct: 64 AERAAHVPEVAYPPQLPVSAKKDDIADAIRAHQVVIVAGETGSGKTTQIPKICLELGRGV 123 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 +G+IGHTQPRRLAARTVA R+A EL T G +G+KVRF+D VS T VKLMTDGILLAE Sbjct: 124 RGMIGHTQPRRLAARTVAERVASELDTPLGEAVGWKVRFTDQVSRGTYVKLMTDGILLAE 183 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQ DR L YDTIIIDEAHERSLNIDFLLGYL +LLPRRPDLK+IITSATIDPERFSRHF Sbjct: 184 IQTDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPRRPDLKVIITSATIDPERFSRHF 243 Query: 242 NNAPIIEVSGRTYPVEVRYRPI-VEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 +API+EVSGRTYPVEVRYRP+ E++++ +RDQ+ AI DAV+EL +E GDIL+F+SGE Sbjct: 244 GDAPIVEVSGRTYPVEVRYRPLLAEDSEEPDRDQVTAIIDAVEELRREPSGDILVFLSGE 303 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG---RRIVLATNVAETSLTV 357 REIRDTADAL K TE+LPLYARLS++EQNRVF+ SG RRIVLATNVAETSLTV Sbjct: 304 REIRDTADALEKRKFPFTEVLPLYARLSHAEQNRVFKRASGDSARRIVLATNVAETSLTV 363 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGIKYVIDPGTARISRYS RTKVQRLPIE ISQASANQRKGRCGR S+GIC+RLYSE+DF Sbjct: 364 PGIKYVIDPGTARISRYSSRTKVQRLPIEAISQASANQRKGRCGRTSDGICVRLYSEEDF 423 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 +RPEFTD EILRTNLASVILQMT+ GLG+I FPF++ PD RNI+DGV+LL+ELGA+ Sbjct: 424 EARPEFTDAEILRTNLASVILQMTSAGLGEIEKFPFIDPPDHRNIRDGVQLLQELGALDP 483 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 +++ +LT GR+L+QLPVDPRLARMVLEA ++GCVRE M++ +ALS+QDPRERP +K Sbjct: 484 EQKDPRKRLTQTGRRLAQLPVDPRLARMVLEADRNGCVREVMVVAAALSLQDPRERPSEK 543 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 Q +D+ H RF D+ SDFLAF+NLW Y+ EQQKALSS+AFRR+CR ++LNYLR+REWQDI Sbjct: 544 QAQADQFHARFKDETSDFLAFLNLWTYIREQQKALSSSAFRRMCRNEFLNYLRIREWQDI 603 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD-----------------AD 640 Y Q+R V ++LG+ VN++ + ++H++LL GLLSHIGMKD Sbjct: 604 YAQVRSVAQQLGLHVNTDDSPPEQVHVSLLAGLLSHIGMKDVKESTAKDPAQQAKEKRRG 663 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 EY GAR A+F++FPGS LFKKPP++VM AELVETSRLW R+ ARI+PEW E + HL+ Sbjct: 664 GNEYLGARGAKFAVFPGSALFKKPPRYVMSAELVETSRLWARVNARIEPEWAERLGAHLV 723 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 KRTYSEPHWE+ Q AVMA EKVT+YG+ + A RKVNY +IDP + RELFIR+ALVEGDW+ Sbjct: 724 KRTYSEPHWEKDQAAVMAYEKVTLYGVTLAAQRKVNYGRIDPEVSRELFIRNALVEGDWR 783 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 T H FF +N +L EVEELEH++RRR I+VDDE LF+FYD+R+ V+S HFDSWWK+ Sbjct: 784 THHKFFADNRRLLTEVEELEHRARRRGIVVDDEALFDFYDERVPTHVVSGAHFDSWWKRK 843 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 +E P+LL+FE+SML+ E A+ I+K DYP+ W QG L LR++YQFEPGADADGVTVH+PL Sbjct: 844 RQEEPELLDFERSMLLTEAAQGITKDDYPDRWRQGPLDLRVTYQFEPGADADGVTVHVPL 903 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 +LNQV GF+WQIPGLR E+V LI+SLPKPVRRN+VPAPN+A FL PL PL Sbjct: 904 QVLNQVTSEGFDWQIPGLREEVVTELIRSLPKPVRRNYVPAPNFARRFLATASPLSAPLT 963 Query: 941 DSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKV 1000 +L + L++M GV V ED+ +VPDHLKITFR+VD++ +KL E + L L+D L+ K Sbjct: 964 TALAKGLQQMVGVPVTAEDFDVAKVPDHLKITFRIVDERRRKLAEDKDLDALRDRLRPKA 1023 Query: 1001 QETLSA--------VADDGIEQSGLHIW-SFGQLPESYEQKRGNYKVKAWPALVDERDSV 1051 ++ LS +E+ GL W G L + +E +RG VKA+PALVDE D+V Sbjct: 1024 RQALSRAAAATAERAGQASVERKGLTDWGDLGTLSKVFETRRGGQPVKAYPALVDEGDTV 1083 Query: 1052 AIKLFDNPLEQKQAMWNGLRRLLLLNIP-SPIKYLHEKLPNKAKLGLYFNPYGKVLELID 1110 ++LFD+ EQ+ AMW+G RRL+L NIP +P K+ ++L N KL L NP+G + L Sbjct: 1084 GVRLFDSEEEQRVAMWHGTRRLILRNIPVNPAKFARDRLTNPQKLALSANPHGSMQALFA 1143 Query: 1111 DCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL 1170 DC + D+LI+ GGP W E G+ L+E VRA + DT V+ V+Q++ A +RL Sbjct: 1144 DCATAAADRLIERAGGPAWDEAGYRKLYEFVRAGIVDTTVNAVAAVQQVVAAWQACERRL 1203 Query: 1171 KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRD 1230 K + L+D++ Q+ LV+ GFV G RL D LRYL+A+++RL+++ + RD Sbjct: 1204 KSTRSPALLANLADVREQLDELVHPGFVAEAGLLRLSDLLRYLRAVDRRLQQMPANAQRD 1263 Query: 1231 RAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKR 1290 +M KV ++ + + + P R + ++IRWM+EELRVSYFA LGT YP+SDKR Sbjct: 1264 TTRMEKVREMRDEYLWLLEQFPQGRPVPREARDIRWMVEELRVSYFAHALGTAYPVSDKR 1323 Query: 1291 ILQAMEQ 1297 I++A++ Sbjct: 1324 IVKAIDA 1330 >UniRef50_Q0A864 ATP-dependent helicase HrpA n=9 Tax=Gammaproteobacteria RepID=Q0A864_ALHEH Length = 1341 Score = 1543 bits (3997), Expect = 0.0, Method: Composition-based stats. Identities = 616/1337 (46%), Positives = 854/1337 (63%), Gaps = 51/1337 (3%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 L+ R+D R +RL G+ ++ + ++ ++I A + R Sbjct: 12 DALRQLRPRIDRAFGPARPALRKRLAGLERRAHDGKPFDKGLVKLERDIAVACQRAETRA 71 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 A P + +LPV+Q+ D+ EAIRDHQVV++ G TGSGK+TQ+PKICM LGRG+ G I Sbjct: 72 ANLPSPRFDPSLPVNQRLDDLREAIRDHQVVVICGATGSGKSTQIPKICMALGRGVHGWI 131 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRRLAART+A RI++EL T G +GYKVRF+D VS+ T +KL+TDG+LLAEIQ+D Sbjct: 132 GHTQPRRLAARTLAQRISDELGTALGEAVGYKVRFTDQVSERTHLKLLTDGMLLAEIQRD 191 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 R L YDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+IITSATIDPERFS+HF+ AP Sbjct: 192 RHLDAYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVIITSATIDPERFSKHFDEAP 251 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES-HGDILIFMSGEREIR 304 I+EVSGRTYPVEVRYRP+V++ D+ + D A+ +AV EL++E GD+L+F+SGEREIR Sbjct: 252 ILEVSGRTYPVEVRYRPMVDDEDERDEDLPGAVVEAVHELAREPGQGDVLVFLSGEREIR 311 Query: 305 DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYV 363 + +AL K + HTE+LPLYARLS +EQ RVF G RR+VLATNVAETS+TVPGI+YV Sbjct: 312 ECTEALRKKHPPHTEVLPLYARLSAAEQQRVFNPKGGGRRVVLATNVAETSVTVPGIRYV 371 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 +D G ARI+RYSYRTKV RLPIEPISQASANQR GRCGR + G+ IRLYSE+DF R F Sbjct: 372 VDSGYARINRYSYRTKVSRLPIEPISQASANQRAGRCGREAPGVAIRLYSEEDFAGRSAF 431 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 TDPEI RTNLA+VILQM ALGLGDI FPFVE P+ + + DG +LL ELGA+T D + Sbjct: 432 TDPEIQRTNLAAVILQMKALGLGDIQRFPFVEPPEHKFVNDGFKLLHELGAVTEDRE--- 488 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 LT LGRQL++LP+DP + RM+L A++ G + E ++I +ALS+QDPRERP+D QQA+D+ Sbjct: 489 --LTALGRQLARLPLDPPVGRMLLAAREQGVLDEVLVIAAALSVQDPRERPLDAQQAADQ 546 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H ++ +SDFL+ V LW Q++ LS+ R+ CR +L+ R+REW DI+ Q+R+ Sbjct: 547 AHAQWRHGKSDFLSLVLLWQDYHRQKRRLSNRQLRQWCRERFLSPHRMREWLDIHRQIRE 606 Query: 604 VVKELGIPVNSEP--------------------------------------AEYREIHIA 625 +V L + + Y +H A Sbjct: 607 LVSGLSGGADRKGAGGGPGRPLRSTGSEGAAASPLARPHTVTTEQCAEWLDTHYEALHRA 666 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 LL GL+S+I + +EY G R + IFPGSG FK+ PKW++ AE VETSRL+ R AA Sbjct: 667 LLAGLVSNIAQ-HHENKEYLGPRGVKLMIFPGSGQFKRNPKWIVAAEFVETSRLFARTAA 725 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 + PEW+E A HL+ R+Y+EPHWE+ V A EKVT+YGL + + R+VNY IDP + Sbjct: 726 EVKPEWIEQTAAHLVSRSYAEPHWEKKPAQVAAYEKVTLYGLVLASQRRVNYGPIDPPVA 785 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 R +FIR ALV+G+++TR F+ N +L E+E LE K+RRRD+LVD+ET F FYDQRI Sbjct: 786 RAIFIREALVQGEYRTRAPFWEHNRRLIEEIERLEAKARRRDVLVDEETRFRFYDQRIPE 845 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQ-GNLKLRLSYQ 864 + S F+ W +VSR+ P L+ + L+++ A+ +S YP+ G L+L L Y Sbjct: 846 GIYSGAAFERWLGEVSRDDPKRLHMSREALMRDDADPVSGEAYPDRLRLPGGLELPLEYH 905 Query: 865 FEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNY 924 EPG++ DGV +P+ LNQ+ FEW +PGL E V+ALI+ LPK +RRNFVPAP++ Sbjct: 906 LEPGSELDGVVARVPVAALNQLRPEPFEWLVPGLVHEKVVALIRGLPKAIRRNFVPAPDF 965 Query: 925 AEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLK 984 A A L + E L D++ R+L+RMTGV + +P+HL++ +RV+D++ L+ Sbjct: 966 ARAVLEAIPHGEGSLTDAVARQLKRMTGVDIPPGALDAVALPEHLRMHYRVLDEQGNTLR 1025 Query: 985 EGRSLQDLKDALKGKVQETLSAVAD--DGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWP 1042 G L L+ L + E+ SA + G+ W FG LPE+ E R ++ +P Sbjct: 1026 TGSDLAALQQGLGDQASESFSASGGGASEWTREGITTWDFGDLPEAVEIGRNGLTIRGYP 1085 Query: 1043 ALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPY 1102 LVDE SV + L D+P E ++ G+RRL +L +P ++YL LP +L L + Sbjct: 1086 CLVDEESSVRLTLADSPDEAERQHRAGVRRLYMLALPQQVRYLRRGLPGLDRLRLAYRGL 1145 Query: 1103 GKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTA 1162 G +L + + VD+ + P TE F E+ R L + +A+ +E++L Sbjct: 1146 GSDEDLKRELVHAAVDRTFLGDA-PPRTEAAFRQRLERGRPRLVENAQRLAEGLEEVLGR 1204 Query: 1163 VFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEK 1222 I K LK + + L D++ + LVY GF+ + L + RYL+A+E+R+EK Sbjct: 1205 YQAIRKALKQFNALALMDSLKDLQEHLECLVYPGFLQQTPPEYLAELPRYLRALERRVEK 1264 Query: 1223 LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGT 1282 L DP RDR + + + W++ ++ + D ++ RW++EE RVS FAQ++G Sbjct: 1265 LRQDPGRDRTPLRSIRPWWERWRERQSRREAQGKPDPALERFRWLLEEYRVSLFAQEVGA 1324 Query: 1283 PYPISDKRILQAMEQIS 1299 +S+KR+ A ++++ Sbjct: 1325 REKVSEKRLKAAWKEVA 1341 >UniRef50_A6VYA9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=A6VYA9_MARMS Length = 1308 Score = 1542 bits (3994), Expect = 0.0, Method: Composition-based stats. Identities = 603/1311 (45%), Positives = 853/1311 (65%), Gaps = 24/1311 (1%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRF-SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAG 59 + K + L +++M RDR +++ K+ K+ + E+ I+++ Sbjct: 5 FSAPSKKDTSLLIMPTNAVMTRDRHLIDQKQVQLSKRQKDGLPFDRMQAELNALIEKSET 64 Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 R++ P++TY ++LPV+ + +I++AI+D+QVVI+AGETGSGKTTQLPK+C++ GR Sbjct: 65 LYQARQSRMPKVTYDESLPVATRADEIIKAIQDNQVVIIAGETGSGKTTQLPKMCLQAGR 124 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 GI GLIGHTQPRR+AAR+VA RI++EL+ G +G++VRFSD ++ T++KLMTDGILL Sbjct: 125 GIAGLIGHTQPRRIAARSVAERISDELQVNLGEQVGFQVRFSDESNEETLIKLMTDGILL 184 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 AEIQQD+ L +YDTIIIDEAHERSLNIDFLLGYLK++L RPDLK+I+TSATID ERFS Sbjct: 185 AEIQQDKRLYKYDTIIIDEAHERSLNIDFLLGYLKQVLAARPDLKVIVTSATIDVERFSE 244 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD----QLQAIFDAVDELSQESH----- 290 HF NAPIIEVSGRTYPVE+RY+P++ ++D E D Q I DAV+ L E Sbjct: 245 HFENAPIIEVSGRTYPVEIRYQPLLSKSDSEELDEDQSMEQGILDAVELLIAEERQSGYR 304 Query: 291 --GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 GDIL+F+ GEREIRDTA+ L + LR TE+LPLYARLS SEQ R+F+SHSGRRIVL+T Sbjct: 305 GAGDILVFLPGEREIRDTAEILRRAELRSTEVLPLYARLSASEQQRIFKSHSGRRIVLST 364 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 NVAETSLTVPGI+YVIDPG ARISRYS R+KVQ+LPIE ISQASANQR GRCGRV++GIC Sbjct: 365 NVAETSLTVPGIRYVIDPGLARISRYSVRSKVQQLPIEKISQASANQRAGRCGRVADGIC 424 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 IRLY E+DF +RPEFTDPEI RTNLASVILQM L LG + FPFVE P+KR I DG R Sbjct: 425 IRLYDEEDFNNRPEFTDPEIFRTNLASVILQMANLKLGAVEKFPFVEMPEKRMINDGYRA 484 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L ELGA+ + +LTP+GRQL++LP+DP+L R+++ A++H ++E II SALSI Sbjct: 485 LTELGALHKE------RLTPIGRQLAKLPIDPKLGRILIAAEQHSVLKEVAIIVSALSIA 538 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 DPRERP DK+ SD+ H D++SDFL F+NLW EQ++ALS N R+ CR +LN+ Sbjct: 539 DPRERPQDKKTQSDQAHAVDKDEDSDFLVFLNLWERFEEQRQALSQNQLRQYCRKQFLNF 598 Query: 589 LRVREWQDIYTQLRQVVKELGIP-VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGA 647 +R+REW+DI+ Q+ K+LG V E Y IH ALL G+ + + K D +E G Sbjct: 599 MRMREWRDIHRQIMIACKQLGFKEVQHEERHYEAIHRALLAGMFTQVANKMEDSKEMLGC 658 Query: 648 RNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 R+ + +IFPGS LFKKPP+W+M AEL+ETS+L+ R+ ARIDP W+E A +KR Y +P Sbjct: 659 RSRKLAIFPGSMLFKKPPQWIMAAELIETSKLYARVTARIDPAWIEEYAAPFVKRQYFDP 718 Query: 708 HWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFR 767 H+ER QG VMA E+V++YGL IVA R+++Y + P RE+FIR LVEG+ +T+ AFFR Sbjct: 719 HFERNQGRVMANEQVSLYGLIIVAKRRIDYGHVHPEDAREIFIRSGLVEGELRTKQAFFR 778 Query: 768 ENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDL 827 +N L +E E K R+RDILVDDET+F FY+ R+ V + + + + K +PD Sbjct: 779 KNKALMELLEAQEAKLRKRDILVDDETVFAFYNSRLPDHVRNLKSLEHFVKT----SPDA 834 Query: 828 LNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVE 887 L + LI + + +P+ + + L + Y+F+PG ADG T+ +P+ LL Q+ Sbjct: 835 LLMTREDLINQDV-SVDDQAFPDSFGLNGVALPIDYKFDPGQAADGATLKVPVGLLRQLS 893 Query: 888 ESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLEREL 947 W +PG +E AL+++LPK +RR FVP P + + + + LL+ L ++ Sbjct: 894 LEDLGWAVPGFIKERCEALLRALPKALRRRFVPIPQFVDRIYPNLSKDKGDLLEQLSLQI 953 Query: 948 RRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV 1007 +R T + + +W+ D++ HL + VVD++ K L G++L L+ V+E+ + Sbjct: 954 KRETLIDIPLNEWNADKLDSHLTLNLEVVDERGKVLGVGKNLAQLQTQFSDLVEESFAKF 1013 Query: 1008 ADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMW 1067 EQ GL W +PE E K+ KV A+PALV + D V++K+FD+ + Sbjct: 1014 GTKQHEQEGLTSWPEQGIPERQEIKQAGIKVTAFPALVAQGDHVSLKMFDDQNTALETHR 1073 Query: 1068 NGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP 1127 G+ LL L + ++YL + LP+ + L F+P G+ L+DD ++ +DK+ Sbjct: 1074 KGVVTLLKLTLSKEMRYLQKNLPHLKESMLIFSPLGQKETLLDDLLNAVLDKVFLDGRAL 1133 Query: 1128 VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKA 1187 T+ F + K + +L D+A Q+ ++L++ + KR+KG + + DIK Sbjct: 1134 PRTKAEFESCLVKNKPQLVSVANDMAGQLYRVLSSYQGVAKRMKGSIPLPWTRIYGDIKV 1193 Query: 1188 QMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQW 1247 Q+ L+Y GF+ LG RY + IE RLE+ +++ + ++E + Q + + Sbjct: 1194 QLEQLIYPGFIGNTPLFWLGQLPRYFKGIEVRLERFQNHLNKENQYVSELEILWQTYSRQ 1253 Query: 1248 INKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 D ++ + RWM+EE R+S FAQ +GT PIS+KR+ + +++ Sbjct: 1254 KKAHDEKALYDPELIKYRWMLEEYRISLFAQSVGTLEPISEKRLNKQWQEV 1304 >UniRef50_Q482P9 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=Q482P9_COLP3 Length = 1375 Score = 1541 bits (3990), Expect = 0.0, Method: Composition-based stats. Identities = 735/1362 (53%), Positives = 954/1362 (70%), Gaps = 72/1362 (5%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMA----------------K 52 L + L D +RF +RL +KK + Q E+A + Sbjct: 15 LQKLFELLPQAKKSDAVRFRKRLINLKKTITKEVGQKSPTELAMLSLSEKHIKLVEPLQQ 74 Query: 53 EIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPK 112 I ++ + + P+ITYP+ LP+S+ I AI +QVVI+AGETGSGKTTQ+PK Sbjct: 75 HILRSIQDKQQKIRSLPKITYPEGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPK 134 Query: 113 ICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKL 172 IC+ELGRG+ GLIGHTQPRR+AARTVANRIAEEL T+ G +GYKVRF+D VS+ + +KL Sbjct: 135 ICLELGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKL 194 Query: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATI 232 MTDGILLAE+Q+DRLL++YDTIIIDEAHERSLNIDF+LGYLK++L +RPDLK+IITSATI Sbjct: 195 MTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATI 254 Query: 233 DPERFSRHFN-----NAPIIEVSGRTYPVEVRYRPIVEEA-------DDTERDQLQAIFD 280 DP+RF++HF+ APIIEVSGRT+PVE+RYRP+ + A E D + I Sbjct: 255 DPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILS 314 Query: 281 AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS 340 AVDELS +GDIL+F++GEREIRDTA AL K NLRHT +LPLYARL+ SEQN++F+ HS Sbjct: 315 AVDELSDCGNGDILVFLNGEREIRDTAAALVKANLRHTNVLPLYARLTVSEQNQIFKPHS 374 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 GR IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP+SQASANQR GRC Sbjct: 375 GRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRC 434 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GRVSEGICIRLYSEDD+ SR EFTDPEILRTNLA+VILQM AL LGDIA FPFVEAPD R Sbjct: 435 GRVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNR 494 Query: 461 NIQDGVRLLEELGAITTDEQ----------ASAYKLTPLGRQLSQLPVDPRLARMVLEAQ 510 NI DGVRLLEE+ A+ + E ++A +LT GR L++ P+DPRLA+MV+ + Sbjct: 495 NITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSI 554 Query: 511 KHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQK 570 + GC+ + +II SALSIQDPRERP +KQQ SDEKH RF DK SDF++ +NLW Y+ EQ+K Sbjct: 555 EFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKK 614 Query: 571 ALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL---------------------- 608 L+ N FR+LC+ ++L+Y+R+REWQDI++QL+ +KE Sbjct: 615 DLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKEQQITLTSIDYQFSMPNVQQGQAA 674 Query: 609 -----GIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 + + +H ALL+GLLSHIG + +EY GAR +F IFPGS L KK Sbjct: 675 STAVDKTKETEQDSALTPVHQALLSGLLSHIGQ-QDENREYKGARGMKFFIFPGSALTKK 733 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVT 723 PKW+M AELVETSRL+ R+ A+IDP W+EP+AQHL+KR YSEPHWE+ QGAVMA E+VT Sbjct: 734 SPKWLMSAELVETSRLFARMNAKIDPLWLEPLAQHLVKRNYSEPHWEKKQGAVMAFEQVT 793 Query: 724 VYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKS 783 +YGL IV+ RK+N++ I+P CRE+FIR ALV GD + F +N +L +EELE K+ Sbjct: 794 LYGLSIVSKRKINFNVIEPVTCREIFIREALVNGDCVIKEKFLSKNQQLVESIEELEQKA 853 Query: 784 RRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKI 843 RRRD L+D++ L +FY ++ V R F +WWKK RE LL+F K+ L+ E ++++ Sbjct: 854 RRRDFLIDEQHLVDFYSDKLPDTVNCQRSFLAWWKKAKRENEQLLDFSKAFLLNESSDEL 913 Query: 844 SKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELV 903 S ++YP+ W Q ++ L L+Y F PG DG++V +P+ LLNQV+E GF+W IP LR EL Sbjct: 914 STIEYPDVWQQDSITLPLTYHFSPGDIDDGISVVLPIALLNQVQEVGFDWLIPALRDELA 973 Query: 904 IALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWD 963 IALIK+LPK +RRNFVPAPNYA+A L + + L D+L ++L RMTGV + + W Sbjct: 974 IALIKALPKTLRRNFVPAPNYAQACLAAMPAEQGHLQDALAKQLLRMTGVRLPEDAWQDI 1033 Query: 964 QVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFG 1023 +P HL + F+VVDDK K +K+GR L +LK L+GKV+ ++ VA+ GIEQ+ L W FG Sbjct: 1034 TLPIHLTMNFQVVDDKGKLIKQGRDLNELKAELQGKVKASIKQVAEKGIEQADLTKWDFG 1093 Query: 1024 QLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIK 1083 LP+ YE+K N +KA+PALVD ++SVAI+LF+ ++AM G+ RL+LLNIP+P+K Sbjct: 1094 SLPKGYEKKVANITIKAFPALVDHKNSVAIELFEQEQHAQEAMLKGISRLILLNIPTPLK 1153 Query: 1084 YLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDA------NGGPVWTEEGFAAL 1137 YL EKLPNKAKLGLYFNP+G + EL+ DCI L+ NG E+ FA Sbjct: 1154 YLQEKLPNKAKLGLYFNPFGSINELLQDCIQGACLSLVQQFSQHQNNGLLPREEKQFAKC 1213 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 + VRAE+ D V+ A +VE+ LT + K++KG V + + DIK Q LV++GF Sbjct: 1214 CDYVRAEIADCVLTAAIKVERALTLRHEVTKKMKGSVPLNVIQSHGDIKQQCEQLVFKGF 1273 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 VT +G +L D +RYLQ + +RLEKL DP++DR ++++V V +Q ++K + Sbjct: 1274 VTYSGLSKLDDIIRYLQGMLRRLEKLPSDPNQDRLKLIEVSKVNDMYQVIMSKQRKDKPV 1333 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 D ++ RW+IEELR+S FAQ LGT PIS KRIL ++ S Sbjct: 1334 DNELLATRWLIEELRISLFAQNLGTSAPISVKRILNYLKGFS 1375 >UniRef50_Q21LQ8 ATP-dependent helicase HrpA n=2 Tax=Gammaproteobacteria RepID=Q21LQ8_SACD2 Length = 1296 Score = 1537 bits (3981), Expect = 0.0, Method: Composition-based stats. Identities = 625/1274 (49%), Positives = 865/1274 (67%), Gaps = 17/1274 (1%) Query: 30 RLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 R + ++K + +++AK+I+QA + R+AA P I++P+ LP+S+K+ DI E Sbjct: 29 REKIIARIKREQPVDKLVEQLAKDIEQAQAVLAARKAAVPAISFPEQLPISEKRADIAEL 88 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 I ++QVVI+AGETGSGKTTQLPKIC+ELGRGI+GLIGHTQPRR+AARTVA+RIA+EL+ Sbjct: 89 IANNQVVILAGETGSGKTTQLPKICLELGRGIRGLIGHTQPRRIAARTVADRIAQELQVP 148 Query: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY+VRF+DHV+D+T++KLMTDGILLAEIQQD LL++YDT+IIDEAHERSLNIDFL Sbjct: 149 LGDAVGYQVRFTDHVTDSTLIKLMTDGILLAEIQQDPLLLKYDTLIIDEAHERSLNIDFL 208 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 LGYLK++L +RPDLK+I+TSATID +RFS+HFNNAP+IEVSGRTYPVEV YRP D Sbjct: 209 LGYLKQILAKRPDLKLIVTSATIDLDRFSKHFNNAPVIEVSGRTYPVEVLYRP----WHD 264 Query: 270 TERDQLQAIFDAVDELSQESHG---DILIFMSGEREIRDTADALNKLNLRHTEILPLYAR 326 D QAI +AV+E+ S G D+L+F+SGER+IR+ + AL K NL H EI+PLYAR Sbjct: 265 EFEDLTQAIVNAVEEIQSISKGRGGDVLVFLSGERDIREASHALKKANLPHWEIVPLYAR 324 Query: 327 LSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 LS EQNRVF H GRR+VLATNVAETSLTVPGI+YVIDPGTARI RYS RTKV+RLP+E Sbjct: 325 LSLEEQNRVFSPHKGRRVVLATNVAETSLTVPGIRYVIDPGTARIKRYSLRTKVERLPVE 384 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446 ISQASANQRKGRCGRVS+G+CIRLY +DF SR EFTDPEILR+NLA+VILQM + +G Sbjct: 385 NISQASANQRKGRCGRVSDGVCIRLYDREDFESRSEFTDPEILRSNLAAVILQMLQMRIG 444 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 D+ FPFV+ PD R I DG +LLEELGA+ ++T LGR L QLP+DP+ RM+ Sbjct: 445 DVRKFPFVDKPDNRLINDGFKLLEELGAVDKSN-----RVTKLGRDLQQLPLDPKFGRMI 499 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 + A + GC+RE +II S L+IQDPRERP DKQQA+DEKHRRF D++SDFL+ VNLW+Y+ Sbjct: 500 VAAAEQGCLRELLIIVSGLTIQDPRERPADKQQAADEKHRRFWDEKSDFLSLVNLWHYVE 559 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIAL 626 EQ++ LS N R+LC+ ++LN++R+REW++++ QLR +K++G N EPA Y +H AL Sbjct: 560 EQRQELSQNQLRKLCQKEFLNFMRLREWRELHHQLRVTIKKMGFKENQEPASYDVVHEAL 619 Query: 627 LTGLLSHIGMKD--ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIA 684 LTGLLS++G K+ D ++Y G RN +F IFPGS L KK PKW+ AE++ETS+++ Sbjct: 620 LTGLLSNMGNKNEEPDARDYRGTRNRKFMIFPGSALRKKRPKWLFAAEMIETSQVYAHCV 679 Query: 685 ARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPAL 744 A+++PEW HL+K Y EPH+++ G V A +++++GL ++ ++V YS+IDPA Sbjct: 680 AQMEPEWALKSGAHLLKYNYFEPHYDKRAGQVKAFVRISLFGLVLIEKKRVGYSKIDPAE 739 Query: 745 CRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRIS 804 RE+FIR ALVEG ++ + AFF +N L AEVE+LE KSRR+DI+VDDE LF FY++ I Sbjct: 740 AREVFIRAALVEGQYRGKGAFFNKNNALIAEVEDLEAKSRRKDIMVDDEVLFNFYNEIIP 799 Query: 805 HDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQ 864 D+ + F+ W KK+ PD L + +L+ GAE +++ +P+ + L +SY Sbjct: 800 PDICNLAGFEHWRKKLEETQPDALLLSRDLLMLHGAEGVTEAQFPDQLDFDGVTLPVSYH 859 Query: 865 FEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNY 924 FEPG DGV+V +P+ LL+ + + W +PGL R+ IAL+K+LPK R+ VP P + Sbjct: 860 FEPGHPQDGVSVKVPVTLLHMLSDLYLPWLVPGLLRDKCIALVKALPKAKRKKVVPVPQF 919 Query: 925 AEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLK 984 + + R+ + L ++L REL+R+ + + +DW + + VVD K L Sbjct: 920 VDRAMARMTRSKASLTEALTRELKRLADIELTEDDWDETALEPFYHMNVIVVDAAGKPLD 979 Query: 985 EGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPAL 1044 +GR L L++ +G VQE+L + A EQ+ L W+F LPE+ + +G V+ +PAL Sbjct: 980 QGRDLNALRERYRGHVQESLQS-AGSSFEQTELTGWTFESLPETVDLDKGGVTVRGFPAL 1038 Query: 1045 VDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK 1104 D+ SV++++ DNP E QA GL RL L + ++YL ++L +GL GK Sbjct: 1039 QDDTSSVSLRVLDNPAEAYQASLAGLARLACLQLGQSVRYLQKQLLKGKDIGLTMVDLGK 1098 Query: 1105 VLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 +++DD + V + + T F + EL + + IL V Sbjct: 1099 RDQVVDDILMAAVYRACFLDKPFPRTATEFKQCVDAGAGELVSIAQEYETLLLDILKYVV 1158 Query: 1165 NINKRLKG-RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 I K +K + +AL DI Q+ L+Y+GF+ + L RYL AIE R+EK Sbjct: 1159 AIKKAMKSNKSAFALALAFGDINQQLAQLIYKGFMFATPVQWLKQYPRYLNAIEVRIEKA 1218 Query: 1224 AVDPHRDRAQMLKVENVQQAWQ-QWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGT 1282 A +P +DR + ++ + Q Q + + + + ++ +E RWM+EELRVS FAQ L T Sbjct: 1219 AQNPQKDRVAIAELIGLWQKHQDRLLKEGSHSYIQNTAWQEYRWMLEELRVSLFAQTLKT 1278 Query: 1283 PYPISDKRILQAME 1296 P+S KR+ + + Sbjct: 1279 LMPVSAKRLNKQWQ 1292 >UniRef50_Q1N0P2 ATP-dependent helicase HrpA n=1 Tax=Bermanella marisrubri RepID=Q1N0P2_9GAMM Length = 1298 Score = 1537 bits (3980), Expect = 0.0, Method: Composition-based stats. Identities = 625/1299 (48%), Positives = 877/1299 (67%), Gaps = 21/1299 (1%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVK-KVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 L +++D ++RDR F +++ +K ++++ F+++A+++ ++ V RE Sbjct: 3 ELDLLAKQIDETLIRDRHGFRKQVGYLKKRLQSKQPIDKGFEKLAQQMQKSIDIVSHREQ 62 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 P + + D LP++QKKQ+I E I ++QVV++AGETGSGKTTQLPKICMELG G I Sbjct: 63 DCPRLEFDDQLPINQKKQEIAETIANNQVVVIAGETGSGKTTQLPKICMELGLAKYGKIA 122 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRRLAAR+VA+RIA+E G +GY+VRF+D D++++KLMTDGILLAE Q DR Sbjct: 123 HTQPRRLAARSVADRIAQECNVPLGEQVGYQVRFTDQSKDSSLLKLMTDGILLAETQNDR 182 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L QY IIIDEAHERSLNIDFLLGYLK+LLP+RPDLK++ITSATID +RFS HF+NAP+ Sbjct: 183 FLNQYQVIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVVITSATIDLQRFSEHFDNAPV 242 Query: 247 IEVSGRTYPVEVRYRP--IVEEADDTERDQLQAIFDAVDELSQESH-----GDILIFMSG 299 IEVSGRTYPVEVRYRP V+ D+ E D Q I DAVDEL +E GD+L+F+SG Sbjct: 243 IEVSGRTYPVEVRYRPIVDVDTDDEQEGDMYQGIIDAVDELEREDAKRGQIGDVLVFLSG 302 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH-SGRRIVLATNVAETSLTVP 358 EREIR+ + AL K NL+ TEILPLYARL++SEQ R+F+ RRIVL+TNVAETSLTVP Sbjct: 303 EREIREASLALKKANLKQTEILPLYARLNSSEQQRIFKPTGGKRRIVLSTNVAETSLTVP 362 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI+YV+D G AR+SRYSYR+KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE+DFL Sbjct: 363 GIRYVVDTGVARVSRYSYRSKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFL 422 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 SRPEF+DPEI RTNLA+VILQM +L LGD+ AFPFV+APD R I+DG LL+EL A+ Sbjct: 423 SRPEFSDPEIQRTNLAAVILQMLSLRLGDVNAFPFVDAPDNRFIKDGYNLLKELSAVDKK 482 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 +T +GRQLS+ PVDPR+AR+++EA + EA+II SALSIQDPRERP++KQ Sbjct: 483 NN-----ITRIGRQLSRFPVDPRIARVLIEANAKHALAEALIIASALSIQDPRERPVEKQ 537 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 Q +D+KH F D ESDF+ +N+WN+ EQ++ALS+N R++C+ +LNY+R+REW+D++ Sbjct: 538 QQADQKHAEFRDDESDFITLINIWNWYEEQRQALSNNQLRQICKKHFLNYMRMREWRDVH 597 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QLR + KEL N E + Y ++H +L+G LSHIG K D+ +Y GARN RF +FPGS Sbjct: 598 YQLRILCKELKFVENKEVSSYDQLHKCILSGYLSHIGQKS-DENDYKGARNRRFLLFPGS 656 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMA 718 G+FKK PKWV+ AELVETS+L+GR+ A I PEW+EP+A++L+K+TY EPHW +G VMA Sbjct: 657 GIFKKRPKWVVSAELVETSKLYGRMNATIQPEWLEPLAKNLVKKTYLEPHWSIKRGQVMA 716 Query: 719 TEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEE 778 E+V+++GL I+ R++ Y+QIDP + E+FIR ALV+G +T+ F N L EV E Sbjct: 717 YEQVSLFGLIIIPRRRIGYAQIDPVVSHEIFIREALVQGQIKTQGDFLEYNQALMEEVAE 776 Query: 779 LEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKE 838 LE KSRRRDI++D+E LF+FY +R+ D+ F+ W KK +T L EKS L++ Sbjct: 777 LEDKSRRRDIVIDEERLFQFYFERVPDDIADTASFEKWRKKNGDDT---LLIEKSYLMQH 833 Query: 839 GAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 A +++ +P+ + G++ LSY+FEPG DGV+V +P P+L Q+ EW +PG+ Sbjct: 834 AASDVTEAQFPDHFSHGSVIYPLSYRFEPGHAEDGVSVMVPAPILKQLPVGRLEWLVPGM 893 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958 R+ VIAL+K+LPKP+R+ VP P++A+ FL + + LL + + + + V + Sbjct: 894 IRDKVIALLKALPKPIRKQLVPVPDFADGFLSQQPNRDQSLLAEICAYVYQQKRIKVSAD 953 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 D++ + DH ++ +V+ ++ L +GR Q L D + V E SA ++ IE+ G+ Sbjct: 954 DFNIASIDDHYRMNIKVIGAEDDLLAQGRDWQKLLDEVGD-VAEQFSADEENDIERQGIT 1012 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 W F +LP Y+ + +V +PAL+D++ SV IKL D EQ G+ RLL L + Sbjct: 1013 QWDFNELPLEYQLTQAGIQVTLYPALIDQQTSVDIKLLDRADEQAVQTRKGILRLLQLEL 1072 Query: 1079 PSPIKYLHEKLPNKA-KLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 + +H+ + + + +Y++ G EL++ T + + Sbjct: 1073 KDQVSVIHKSVQKQLVQEIIYYSQLGNKTELLESITRQVFANSFCWQDN-PHTHSDYIKV 1131 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 ++ RA + + + +I + IL +NK LK + A +SDIK Q+ L+ +GF Sbjct: 1132 KDEGRANIGECLDEILPITKDILKQYHELNKALKKHNQLAFAFAVSDIKHQIQALMPKGF 1191 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 + + L RY++++ +RL KL + +D+ Q LKV + +Q+ ++ LP + Sbjct: 1192 LGFVPLEWLKHYPRYIKSMIQRLTKLQGNVQKDKLQQLKVSAWNEEYQKLLSDLPASLDC 1251 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 +V + WMI+E RVS FAQ+LGT P+SDKR ++ Sbjct: 1252 YPEVLTLNWMIQEYRVSLFAQELGTVIPVSDKRWKAQLQ 1290 >UniRef50_Q2Y975 ATP-dependent helicase HrpA n=2 Tax=Proteobacteria RepID=Q2Y975_NITMU Length = 1329 Score = 1533 bits (3969), Expect = 0.0, Method: Composition-based stats. Identities = 578/1326 (43%), Positives = 802/1326 (60%), Gaps = 86/1326 (6%) Query: 54 IDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKI 113 ++ + R A P+ YP+ LPV +Q+I +AI+ +QVVI++GETGSGKTTQLPKI Sbjct: 7 VNAKSRNFEQRLANLPKPAYPEELPVVALRQEIAQAIQKNQVVIISGETGSGKTTQLPKI 66 Query: 114 CMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLM 173 C+ELG G+ +IGHTQPRR+AARTVA RIA ELK+ G +GYKVRFSD VS T VKLM Sbjct: 67 CLELGWGLHAMIGHTQPRRIAARTVAARIASELKSPLGHAVGYKVRFSDKVSPETYVKLM 126 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATID 233 TDGILLAE Q D L+ YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+I+TSATI+ Sbjct: 127 TDGILLAETQGDPNLLAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIVTSATIN 186 Query: 234 PERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEA-------------------------- 267 ERFS HF+NAP+IEVSGR YPVEVRYRPI A Sbjct: 187 SERFSAHFHNAPVIEVSGRMYPVEVRYRPIEAPARAASAIAEDRNEDKAGNKTRDKDKDR 246 Query: 268 --------DDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN----- 314 D E D QAI DAVDE+++ GD+L+F+ GEREIRDTA+AL K Sbjct: 247 QKDKHKDRDRDEGDIEQAILDAVDEINRCGPGDVLVFLPGEREIRDTAEALRKHAFGGPG 306 Query: 315 --LRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTAR 370 EILPL+AR S ++Q RVF+ RRIVLATNVAETSLTVPGI+YVID G AR Sbjct: 307 TGRAGAEILPLFARQSYADQERVFKPGGSSLRRIVLATNVAETSLTVPGIRYVIDTGVAR 366 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 I RYSYR KV++L +E IS+ASANQR GRCGRV GIC RLYSE D+L+RPEFTDPEILR Sbjct: 367 IKRYSYRNKVEQLQVEKISRASANQRAGRCGRVMSGICFRLYSEQDYLARPEFTDPEILR 426 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 ++LA+VIL+M +L +G I FPF+E P R I DG +LL ELGA+ LT +G Sbjct: 427 SSLAAVILRMKSLKIGSIENFPFLEPPLPRMIADGYQLLAELGAVDESN-----TLTSIG 481 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 +L++ P+DPR+ARM+L A++ C+ E +II SALS+QDPR+RP ++Q+A+D H+ F D Sbjct: 482 WRLARFPIDPRIARMILAAKEENCLTEMLIIASALSVQDPRDRPFERQEAADRAHQSFQD 541 Query: 551 KESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 + SDFL ++ LW++ + + S+ C+ ++L++ R+REW++++ QL +V E G Sbjct: 542 ERSDFLGYLKLWDFFDDLLKHKKSNRKLIEQCQENFLSHRRMREWREVHGQLHTLVVETG 601 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM 669 N PA Y EIH ALL GLL +IG + + EY G R +FSIFPGS L K PKW++ Sbjct: 602 FKPNKIPANYDEIHRALLAGLLGNIGFRIDEDNEYLGTRGIKFSIFPGSVLKKAKPKWIV 661 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPI 729 AEL ET+RL+GR A+IDP WVE + K+ Y +PHWE+ V A E+VT+YGL + Sbjct: 662 AAELTETTRLYGRGVAKIDPAWVERIGGKFCKKHYFDPHWEKKSAQVSAFERVTLYGLTV 721 Query: 730 VAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDIL 789 V R+V Y I+P RE+FIR ALV G++ T+ FF+ N +L A V LEHK+RR D+L Sbjct: 722 VPKRRVYYGNINPKEAREIFIRSALVAGEYITQAPFFKHNHELIANVAALEHKTRRPDVL 781 Query: 790 VDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYP 849 VD++ +F FYD I + + F+ W ++ RE LL K L++ A+ +++ +P Sbjct: 782 VDEQEIFVFYDGLIPEGISNGAAFEKWHREAERENSRLLYIPKEYLMRHTAQSVTEERFP 841 Query: 850 NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKS 909 + L L+Y+F+PG DGVT+ +PLPLLN+++ + F+ +PGL RE + +++ Sbjct: 842 DTMLVDGFPLSLTYRFDPGHVLDGVTITVPLPLLNKLDATQFDSLVPGLVREKITWYLRA 901 Query: 910 LPKPVRRNFVPAPNYAEAFLGRV---------KPLELPLLDSLERELRRMTGVTVDREDW 960 LPK +RR+ VP P + FL +P L ++L R +R TG+TV + W Sbjct: 902 LPKQIRRHVVPVPEFVTQFLESAEHAAATSPPEPSPSLLTETLARFIRTKTGLTVPPDAW 961 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV---ADDGIEQSGL 1017 ++ P HL + +++VDD ++L R L LK L Q T S + +E+ + Sbjct: 962 D-EKPPSHLMMNYKIVDDAGQELAMNRDLGQLKTQLGQAAQLTFSRSESGEHNPLERDDV 1020 Query: 1018 HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLN 1077 W FG LP+ R + +PAL + VAI+LFD + +M G+R+LL Sbjct: 1021 KHWDFGDLPQEITFTRAGKNMTGFPALAERDGKVAIRLFDTREAAELSMRGGVRQLLGFE 1080 Query: 1078 IPSPIKYLHEKLPNK----------AKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP 1127 + +K L + L + A+ + K +L +D ++ D+ A+ Sbjct: 1081 LKEQMKQLEKDLSGQGAKSGKGRYLAQAAFQLHTLIKPEQLKEDILNAVADRAFIADDAL 1140 Query: 1128 VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKG--------------R 1173 +E+ F A ++ R L + + V+ + + + R+ Sbjct: 1141 PRSEKEFVAQRQRARTRLPAVSEALVRIVQNVASESQVLMARISSIGGTGKVGVQKTGAA 1200 Query: 1174 VDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 +D+ Q+ LVY GF++ ++RL RYL+ + RL+K +P RD Sbjct: 1201 SGGGSGNPGADLMIQLRNLVYPGFLSATPWERLQHLPRYLKGMILRLDKYDANPERDARH 1260 Query: 1234 MLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 + + ++Q + K AR +D + E RW IEELR+S FAQ+L TP P+S KR+ + Sbjct: 1261 AAAIAGLWNRYEQRLEKHRKARIDDPRLVEFRWQIEELRISLFAQELKTPSPVSAKRLQK 1320 Query: 1294 AMEQIS 1299 E+I+ Sbjct: 1321 LWEEIN 1326 >UniRef50_Q47AH6 ATP-dependent helicase HrpA n=7 Tax=Betaproteobacteria RepID=Q47AH6_DECAR Length = 1329 Score = 1525 bits (3950), Expect = 0.0, Method: Composition-based stats. Identities = 571/1308 (43%), Positives = 811/1308 (62%), Gaps = 39/1308 (2%) Query: 20 MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV 79 + D R S +++ + + QQ + ++A I+++ V R A P+ + +LPV Sbjct: 29 LTSDARRLSSLRAELRRS-SGEKQQKLQADLAALIERSRAAVQERRAKLPKPEFQTDLPV 87 Query: 80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA 139 ++++ DI E I ++QVVIV GETGSGKTTQLPKIC++LG G +GLIGHTQPRRLAAR+VA Sbjct: 88 NERRADIAELIANNQVVIVCGETGSGKTTQLPKICLDLGIGARGLIGHTQPRRLAARSVA 147 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 R+A+ELKT+ G +G K+RF D + + VKLMTDGILLAE Q D L Y+ IIIDEA Sbjct: 148 TRLAQELKTQVGAGVGVKIRFHDKSTSESWVKLMTDGILLAESQSDPYLNAYEAIIIDEA 207 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----NNAPIIEVSGRTYP 255 HERSLNIDFLLGYLK+LLP+RPDLK+IITSATID ERFS+HF +AP+IEVSGR +P Sbjct: 208 HERSLNIDFLLGYLKQLLPKRPDLKLIITSATIDAERFSQHFSAHGKSAPVIEVSGRLFP 267 Query: 256 VEVRYRPIVEEA-DDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN 314 VEVRYRP+V+ D ERD AI DA DELS+ GDIL+F+ GEREIR+ A+AL K Sbjct: 268 VEVRYRPVVDIDKKDDERDLYDAIVDAADELSRLGSGDILVFLPGEREIREAAEALRKHA 327 Query: 315 LRH--------TEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVID 365 L EILPL++RLS +Q+R+F+ G RRIVLATNVAETSLTVPGI+YVID Sbjct: 328 LARPGLSSAHAPEILPLFSRLSAGDQDRIFKPSGGQRRIVLATNVAETSLTVPGIRYVID 387 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G AR+ RYSYR KV++L +EPISQA+A QR GRCGRV+ G+C+RLY E DF +R FTD Sbjct: 388 TGLARVKRYSYRNKVEQLQVEPISQAAARQRAGRCGRVAAGVCVRLYDEADFNARAPFTD 447 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEILR++LA VIL+M +L L D+ +FPF+E P + I DG LL+ELG + D + Sbjct: 448 PEILRSSLAGVILRMKSLKLTDVESFPFIEPPPAKAISDGYALLQELGGLDDDN-----R 502 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT +G L++LP+DPR+ RM++ A+ GC++E +II + LS QDPRERP ++QQA+DEKH Sbjct: 503 LTKVGDALAKLPLDPRIGRMLVAARDLGCLKEVLIIAAGLSTQDPRERPQERQQAADEKH 562 Query: 546 RRFHDKESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 ++F D++S+FL++V LW + + S+ C +L+YLR+REW++++ QL + Sbjct: 563 KQFADEKSEFLSWVKLWGWFQNVVEHKKSNKQLIDNCHAHFLSYLRLREWREVHGQLHAM 622 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 V ELG N P + IH ALLTGLL +IG K + Y GAR R+ I P S L KK Sbjct: 623 VTELGWKENDLPGTFDAIHQALLTGLLGNIGCKSDESGYYLGARGIRYLIHPSSPLQKKA 682 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTV 724 KW+M AE+ ET+RL+GR ARI+ +W+E V HLIKR Y +PHWE+ V E+ T+ Sbjct: 683 GKWIMAAEITETTRLFGRCVARIEADWIEKVGAHLIKRQYFDPHWEKKSMQVAGWERTTL 742 Query: 725 YGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRH----AFFRENLKLRAEVEELE 780 YG+ I R+++Y + PA RE+FIR LV + FF+ N K ++E++E Sbjct: 743 YGIVINPKRRIHYGPLAPAEAREIFIRQGLVGEEIDESFAKCWPFFQHNQKQIRDIEKIE 802 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 HK RR+D+LVDDE +F FYD I + + FD W K +E P LL K L++ A Sbjct: 803 HKQRRQDVLVDDELIFGFYDHLIPEGIHNGATFDHWRKTAEQENPKLLFLSKDDLMRHSA 862 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 ++ +P+ G ++ L+Y FEPG+ DGVT+ +PL LNQ+ EW +PGL + Sbjct: 863 AGVTTEAFPHHIKVGGVEYGLTYHFEPGSPRDGVTLTLPLAQLNQIPVLRMEWLVPGLLK 922 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE--------LPLLDSL--ERELRRM 950 E ++ LIK+LP+ +R VP P + E F+ + PL+D + R L Sbjct: 923 EKLVQLIKTLPQKIRAKLVPVPEFVEEFIAATAGNDKKMNQGLIPPLIDYILEARGLNAR 982 Query: 951 TGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADD 1010 G V + + D +P H + ++++D+ ++L RSL L+ + +E + + + Sbjct: 983 -GWAVTPDAFRPDALPPHFSMNYKLIDEHGRQLDMNRSLLALRGEWGKEAKEEFADLHET 1041 Query: 1011 GIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGL 1070 E + L W+FG+LPE E G V +PAL DE ++V++K+FD+ E + GL Sbjct: 1042 PSEYTQLTDWTFGELPELMEVPVGKQTVIGYPALSDEGETVSLKVFDSAEEAAETHRKGL 1101 Query: 1071 RRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWT 1130 RL +L ++Y + +P ++G+ + P G EL + ++ P T Sbjct: 1102 ARLFMLQFKEQVRYFDKNVPGLTQMGMQYMPLGSTDELKRQLVDLSFERACLTEPLPT-T 1160 Query: 1131 EEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMG 1190 E F A + +A L + ++ + V +LT + K+L A ++DI+AQ+ Sbjct: 1161 PEAFKARCAEAKARLGLIMQEVCRMVGTVLTEWQAVTKKL--PAFKAHAAAVADIEAQLK 1218 Query: 1191 GLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINK 1250 L+ + FV F+RL RY++AI RL+KL +P RD M + + +++ + Sbjct: 1219 RLLGKNFVVDTPFERLQHYPRYMKAIVVRLDKLKANPARDAQLMAEYGPLWSNYERRAIQ 1278 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 L D V++ RW++EELRV +AQ+L TP P+S KR+ + E I Sbjct: 1279 LAKLGTLDPQVEQFRWLLEELRVGLYAQELRTPVPVSTKRLQKQWEGI 1326 >UniRef50_Q0F3B4 ATP-dependent helicase HrpA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3B4_9PROT Length = 1289 Score = 1514 bits (3921), Expect = 0.0, Method: Composition-based stats. Identities = 616/1294 (47%), Positives = 853/1294 (65%), Gaps = 9/1294 (0%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 L +L M+ +R + S+RLHG+++ ++ + EI ++ R Sbjct: 1 MIDELSGQLAECMIAERRKLSKRLHGLRRRLQQKKPVDRALAALTAEIAASSACHARRRQ 60 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 A P ++YP LPVS+K++ I AI HQVVI+AGETGSGKTTQ+PKIC+ELGRG+ GLIG Sbjct: 61 ACPAVSYPAELPVSEKRETIAAAIAKHQVVIIAGETGSGKTTQIPKICLELGRGMAGLIG 120 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AAR+VA RIAEE+ + G +GYKVRFSDH + +KLMTDGILLAEIQ D Sbjct: 121 HTQPRRIAARSVATRIAEEMGSPIGEHVGYKVRFSDHTGTDAYIKLMTDGILLAEIQSDP 180 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 LL+ YDTIIIDEAHERSLNIDFLLGYLK+LLP+R DLKIIITSATI+ RFS FN AP+ Sbjct: 181 LLLAYDTIIIDEAHERSLNIDFLLGYLKQLLPKRRDLKIIITSATINTGRFSAFFNEAPV 240 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRD 305 IEVSGRT+PVE+RYRP+ + DD +RD QAI DAVDE + GDILIF+ GEREIR Sbjct: 241 IEVSGRTHPVEIRYRPLQGDDDDRDRDLPQAIMDAVDEAALIDRFGDILIFLPGEREIRA 300 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 +AL++ + TE++PL +RLS +EQ+RVFQ H+GRRIVLATNVAETSLTVPGI++VID Sbjct: 301 VTEALHQHKMTQTEVIPLLSRLSPAEQDRVFQKHTGRRIVLATNVAETSLTVPGIRFVID 360 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARISRYS RTKVQRLPIEP+SQASANQR GRCGRV+ GICIRLYSE+ F +RPE TD Sbjct: 361 SGLARISRYSTRTKVQRLPIEPVSQASANQRAGRCGRVAAGICIRLYSEESFDNRPEQTD 420 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI RTNLASVILQM+ LGLGD+AAFPF++AP+K I+DG LLEEL A+ + + Sbjct: 421 PEIRRTNLASVILQMSNLGLGDVAAFPFMDAPEKPAIRDGYLLLEELQAVDSKRE----- 475 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT +G++L +LPVDPR+ RM+L+A + E +II SALS+QDPR RPMD QQ +DEKH Sbjct: 476 LTLIGKKLVRLPVDPRIGRMLLQADSERSLHEVLIIASALSVQDPRTRPMDMQQQADEKH 535 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 R F D SDFL ++ LW++ EQ + LS + R+LC +L+Y+R+REW D+++QL VV Sbjct: 536 RLFADPASDFLVWLKLWDWYHEQARHLSRSKLRKLCHDRFLSYIRLREWHDLHSQLLAVV 595 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 +E+ + N +PA IH ALL GLLSH+G+ D K++Y GARN RFS+FPGS L KKPP Sbjct: 596 REMKMTPNKQPATADAIHRALLAGLLSHVGLYDEKKKQYLGARNLRFSLFPGSALCKKPP 655 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVY 725 KWV+ ELVETSRL+GR AA I+P W+E +A HL+ R+YSEPHW R + V A EK+++Y Sbjct: 656 KWVICGELVETSRLFGRTAAVINPAWLEELAPHLVNRSYSEPHWSRKRAQVAAYEKLSLY 715 Query: 726 GLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRR 785 G+PI+A+R ++Y +DP + RELFIRHALV+ ++ T N +L +E+E LE K RR Sbjct: 716 GIPIIASRLIHYGPVDPVVARELFIRHALVQHEFHTHAKAILHNRRLISELERLEAKQRR 775 Query: 786 RDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISK 845 RD+L +++ +F+F+D I V + + F+ W + ++ P LL ++ L+ A +I Sbjct: 776 RDLLAEEQVVFDFFDAIIPAHVFTGKLFEQWRLQAEKKQPKLLYLQQQELLHSDAAQIDA 835 Query: 846 LDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIA 905 +P+ + G LKL+ Y F+P ADG+T+ +PLP+L Q++ FEW +PG+ +E ++ Sbjct: 836 AAFPDTFIDGLLKLKYRYHFDPAHKADGITLLVPLPVLGQLDAERFEWLVPGMLQEKLLL 895 Query: 906 LIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQV 965 LIKSLPK +RR+FVPAP++A A + + L+D L REL RMTGVT DWH D + Sbjct: 896 LIKSLPKAMRRHFVPAPDFARAAAENMPFGQGRLIDMLARELGRMTGVTPHHTDWHSDNL 955 Query: 966 PDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSA-VADDGIEQSGLHIWSFGQ 1024 P H+++ F ++D++ K+++ R L+ L+ G + +L A A +E+SG+ W FG+ Sbjct: 956 PAHMRMQFCLLDEQGKEVESSRDLRALQHKYAGHSRRSLQAVDAVQALERSGITRWDFGE 1015 Query: 1025 LPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKY 1084 LP R +++ +PAL D+ D V+I++F++ E GL RL +L++ ++ Sbjct: 1016 LPTVVSTLRRGMQLQLFPALQDDGDKVSIRVFESRHEADTITRKGLLRLFMLHLHQQVQM 1075 Query: 1085 LHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 L + P ++ + + G L DD I+ + +E F E+ R+ Sbjct: 1076 LKKSTPQLQQMSMRYALIGDPSTLKDDLITAAFTAQFM-HEPLPRSESAFNQRLEQGRSR 1134 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 + ++A + LTA + L+ + + DI+ Q+ LV GF+ + Sbjct: 1135 IVARAAELAGHITAALTAHTELITALENSRAAPLKPVVDDIREQIERLVSAGFIADTPAE 1194 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 L R++QA RL K + +D+ + + + L + + + + Sbjct: 1195 WLAHYPRFIQAATIRLGKAGRNLKQDQLHREALSRLWSLYVARRADLEHQQADTSAIDDF 1254 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RW IEELRVS FAQ L T P+S K++ + + Sbjct: 1255 RWQIEELRVSLFAQDLKTSIPVSLKKLESLWQTL 1288 >UniRef50_B5JXZ9 ATP-dependent helicase HrpA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXZ9_9GAMM Length = 1300 Score = 1514 bits (3920), Expect = 0.0, Method: Composition-based stats. Identities = 601/1310 (45%), Positives = 831/1310 (63%), Gaps = 28/1310 (2%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 + + AL+ R+ M D+ RRL + +AK+ID +A + Sbjct: 2 SEPPIQAAALKARIAEAMRGDQFHLHRRLKRLD-----ADNAEAVSALAKDIDTSAQRRQ 56 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 R P Y LP+ + DIL+AI +HQVV++ GETGSGKTTQLPK+C+ELGRG+ Sbjct: 57 QRAETLPTPEYDAQLPIVAARADILKAIEEHQVVVLCGETGSGKTTQLPKLCLELGRGVA 116 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 G IGHTQPRRLAAR+VA RIAEELKTE G +G+KVRF+D VS+ + +KLMTDGILLAE Sbjct: 117 GYIGHTQPRRLAARSVAARIAEELKTELGQGVGFKVRFADKVSELSHIKLMTDGILLAET 176 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 Q DR L +YDT+IIDEAHERSLNIDFLLGY+K +LPRRPDLK+IITSATIDPERFS+HFN Sbjct: 177 QGDRFLERYDTLIIDEAHERSLNIDFLLGYIKRILPRRPDLKVIITSATIDPERFSKHFN 236 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTERD--QLQAIFDAVDELSQESHGDILIFMSGE 300 +API+ VSGRTYPVEV YRP+V+ D ER+ Q + D VDE Q GDIL+F+ GE Sbjct: 237 DAPILNVSGRTYPVEVEYRPLVDLDSDDERETSLRQGVADCVDEAMQNGPGDILVFLPGE 296 Query: 301 REIRDTADALNK----LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 R+IRDT L K + +ILPLY RLSN+EQ R+F+S RRIVL+TNVAETS+T Sbjct: 297 RDIRDTQRFLEKHFASRRGQSADILPLYGRLSNAEQQRIFKSSGPRRIVLSTNVAETSVT 356 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI +VID G AR+SRYSYR+KVQRLPIE ISQASANQRKGRCGRV+ GIC RLYSEDD Sbjct: 357 VPGIVFVIDTGLARVSRYSYRSKVQRLPIEAISQASANQRKGRCGRVAPGICYRLYSEDD 416 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F +RPEFTDPEILRTNLA VILQM +L LG+I FPF+EAPD R I DG +LL ELGA++ Sbjct: 417 FNARPEFTDPEILRTNLAEVILQMESLRLGEIEQFPFIEAPDSRLISDGYKLLFELGAMS 476 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + +KLT LG+++S+LP+DPRLARM++ + + C+ E + + +ALSIQDPRERP D Sbjct: 477 RQGK--RHKLTSLGQKMSRLPIDPRLARMLMASDRENCLEETLTLVAALSIQDPRERPHD 534 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 +QA+DE H+++ D+ SDF+A +NLW + E+ +ALS N R+ CR ++L+++R+REW+D Sbjct: 535 HRQAADEAHQQWRDERSDFIALLNLWRHFNERSRALSQNQLRKWCRENFLSWVRMREWRD 594 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 QL K+L + NS Y E+H ALL+GLL +IG+K DK EY G RN RF +FP Sbjct: 595 TRRQLSDFAKQLKLKRNSIEPVYDELHRALLSGLLGNIGLK-EDKSEYLGPRNRRFHLFP 653 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GSG+ +K +WVM AE+ ETSR++ A I PEW+E A HL+K+ EPH+ R G V Sbjct: 654 GSGV-RKKVQWVMAAEIFETSRVFAHTVAEIKPEWLEQYASHLLKKRQFEPHFHRKSGQV 712 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 MA E+ ++YGL I A ++VNYS+I+P R++F+R AL + Q+ F R N +L ++ Sbjct: 713 MAYEQASLYGLVIRARKRVNYSRINPVESRQIFVRDALADMQLQSEAPFMRHNRQLLEDI 772 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI 836 ELE K RRRD+L+D++ F++QR+ DV A FD W KKV R+ P L + + Sbjct: 773 AELEAKGRRRDLLLDEQPRIAFFEQRVPQDVGDAATFDRWRKKVERDDPYYLYLSERDCL 832 Query: 837 KEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIP 896 ++ + +P+ L L LSY FEPGAD+DG+T+HIP L QV+ W +P Sbjct: 833 RQADHAVHTAQFPSELQFDELTLPLSYHFEPGADSDGITLHIPSAALKQVDAERCSWLVP 892 Query: 897 GLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE--------LPLLDSLERELR 948 G + + ALIKSLPK R FVP P+ A + L +L L Sbjct: 893 GWLEDKIAALIKSLPKAQRTRFVPVPDVASEARRELMRQNPQCGAGEVRSLSRALAAWLG 952 Query: 949 RMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA 1008 R GV + D ++ HL++ F V + K + +GR L L+ +L +++ Sbjct: 953 RYAGVALSPNDLAEAELEPHLRMRFEVRNADQKLIGQGRDLNALQASLAEHAEDSFYGGD 1012 Query: 1009 DDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWN 1068 +E+ G+ W FG+LP+ ++ ++K +PAL+D DSV+I+L D ++++ + Sbjct: 1013 FHDLERDGITRWDFGRLPDGVAFEQNGVQLKGYPALLDMGDSVSIRLLDTREDRQRQHRD 1072 Query: 1069 GLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPV 1128 GL RL L + IKYL +P+ KL L+F P G EL++D I ++ +G Sbjct: 1073 GLARLFQLQLRDQIKYLKRHIPDIDKLALWFAPVGGKDELVEDIIYAVTQRVFLEHGELP 1132 Query: 1129 WTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQ 1188 F + + ++E+ + +++Q+ +IL ++ +++ G + + DI Q Sbjct: 1133 SHPADFESEVARGKSEMVEAAAALSQQLVEILGQAHSVRQKIGGELPLNWVEAAQDIDDQ 1192 Query: 1189 MGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI 1248 + L+Y GF++ L RYL AI+ RLEKL P +DR + ++E + +Q Sbjct: 1193 LEWLIYPGFLSETPSDWLAQYPRYLAAIQFRLEKLDHAPDKDRLRRSEIEPLWARFQGLW 1252 Query: 1249 NKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 ++L E RW++EELRV+ +AQ L T S +R+ +A+ + Sbjct: 1253 DELEA-----PQAAEARWLVEELRVARYAQHLKTRLKTSPERVEKALNGL 1297 >UniRef50_Q0S1M3 ATP-dependent helicase hrpA n=5 Tax=Corynebacterineae RepID=Q0S1M3_RHOSR Length = 1296 Score = 1510 bits (3910), Expect = 0.0, Method: Composition-based stats. Identities = 709/1301 (54%), Positives = 925/1301 (71%), Gaps = 22/1301 (1%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 + L+ L L LRD R +++ + ++ EI A G++ R + Sbjct: 7 SRRELKNSLGELTLRDEHR-------LRRRLDRARTPDALASLSDEIAAARGRIARRLDS 59 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P I YPD+LPVSQ++ DI +AI ++QVVIVAGETGSGKTTQ+PKIC+ELGRG++GLIGH Sbjct: 60 VPVIEYPDSLPVSQRRDDIAKAIAENQVVIVAGETGSGKTTQIPKICLELGRGVRGLIGH 119 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAARTVA RIAEEL++E G +GY VRF+D VSD T+VKLMTDGILLAEIQ+DR+ Sbjct: 120 TQPRRLAARTVAERIAEELRSELGETVGYTVRFTDQVSDGTLVKLMTDGILLAEIQRDRM 179 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----- 242 L +YDT+IIDEAHERSLNIDF+LGYL++LLPRRPDLK+IITSATIDPERF++HF Sbjct: 180 LRRYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPERFAQHFATDDGV 239 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDT--ERDQLQAIFDAVDELSQESHGDILIFMSGE 300 API+EVSGRT+PVE+RYRP+ + D +RD + A+ +AV+ELS E GDIL+F+SGE Sbjct: 240 PAPIVEVSGRTFPVEMRYRPLTVDVGDQTFDRDPVDAVCEAVEELSGEGDGDILVFLSGE 299 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 REIRDTADAL LR TEI+PLYARLS +EQ++VF H+GRR+VL+TNVAETSLTVPGI Sbjct: 300 REIRDTADALRDRRLRGTEIVPLYARLSAAEQHKVFTPHTGRRVVLSTNVAETSLTVPGI 359 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 +YV+DPGTARISRYS RTKVQRLPIEPISQASA QR GRCGRV+EGICIRLYSE+DF +R Sbjct: 360 RYVVDPGTARISRYSVRTKVQRLPIEPISQASARQRSGRCGRVAEGICIRLYSEEDFEAR 419 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 P FT+PEILRTNLASVILQMTALGLGDIAAFPFV+ PD R ++DG+ LLEELGAI Q Sbjct: 420 PAFTEPEILRTNLASVILQMTALGLGDIAAFPFVQPPDPRAVRDGIGLLEELGAIERKAQ 479 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 LT +GR+L+Q+PVDPR+ARM++EA ++GC+ E ++I SALSIQD RERP + QQA Sbjct: 480 NEQPVLTAVGRELAQIPVDPRMARMLVEAHRNGCLAEVLVIVSALSIQDVRERPAEFQQA 539 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +DEKH RF + SDFLAF+ LW YL EQ+ LSSN FR++CR ++L++LR+REWQD++ Q Sbjct: 540 ADEKHARFTVENSDFLAFLELWKYLREQRNELSSNQFRKMCRNEFLHWLRIREWQDLHGQ 599 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 LRQ+ + LG PA IH +LL GLLSHIG+++ DK+++ GAR +RF++FPGS L Sbjct: 600 LRQITRGLGWDTTDTPAGEAAIHQSLLAGLLSHIGLREGDKRDFLGARGSRFAVFPGSSL 659 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 FKKPP+WVM AELVETSRLW R++ARI+PEW E +A HL+KRTYSEPHW +GA MA E Sbjct: 660 FKKPPRWVMAAELVETSRLWARMSARIEPEWAEKLAPHLVKRTYSEPHWSSKRGAAMAYE 719 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +VT+YG+P+VA R V YS IDP R+LFIRHALV+G+WQT+H FF N L +VEELE Sbjct: 720 RVTLYGIPLVARRAVTYSTIDPETSRDLFIRHALVQGEWQTQHKFFHANRALLEDVEELE 779 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 H++RRRDILVDD+TL++FYDQR+ + +SARHFDSWWK R+ PDLL F ++ ++ + Sbjct: 780 HRARRRDILVDDDTLYDFYDQRVGPEAVSARHFDSWWKVARRKNPDLLTFTQATVVNAES 839 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 + +YP+ W QG+++ L+YQFEPG + DGVT IP+ LL + GF+W +PG+R Sbjct: 840 AAVLGGEYPDAWRQGDMQFPLTYQFEPGTEDDGVTARIPIALLAGLRPVGFDWLVPGMRV 899 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 ELV ALIK+LPK +RR VPAP++A A L VKP PL ++ REL R+ +D +D+ Sbjct: 900 ELVTALIKTLPKTLRRQVVPAPDFAAAALAAVKPRSEPLTMAMARELSRLGACRIDPKDF 959 Query: 961 HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW 1020 +PDHL++TF VD+K L + L L+ +L +V+ ++ A + E+ W Sbjct: 960 DVTALPDHLRMTFAAVDEKGAVLGRDKDLVSLRKSLAPRVEVEVAKAASNS-ERPPALTW 1018 Query: 1021 ---SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLN 1077 + G L + ++ G KV +PALV E D VA+++ Q+ AM G RRLLL Sbjct: 1019 TPATLGSLEATVTRELGGQKVTGYPALVPEGDGVAVRVLSTAAAQRSAMRAGTRRLLLAA 1078 Query: 1078 IPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAAL 1137 +P+ K + L N +L L NP G + LIDDC + +++I A+G PV T + F AL Sbjct: 1079 VPTQAKTVTSGLSNAQRLALGQNPDGSLDALIDDCRNAAANQVIAAHGTPVRTPQEFDAL 1138 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 RAE+ V + + V +L A + L+ D++ Q L++ GF Sbjct: 1139 VATARAEMARNVAVLLRLVSPVLEADHRLTVVLER----ATGEAADDVREQRQSLLFPGF 1194 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 V G RL + RYL A RL+ L RD+ M ++ V +++ + LP R+ Sbjct: 1195 VADIGATRLRELPRYLAAAAARLDALPGSAPRDQKGMDVLDRVYAGYERMLAGLPEERQH 1254 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +V I WMIEELRVS FAQ LGTP P+S+KR++ AME++ Sbjct: 1255 TPEVDAIHWMIEELRVSLFAQTLGTPIPVSEKRVISAMEKV 1295 >UniRef50_A3YEF6 ATP-dependent helicase HrpA n=1 Tax=Marinomonas sp. MED121 RepID=A3YEF6_9GAMM Length = 1328 Score = 1509 bits (3907), Expect = 0.0, Method: Composition-based stats. Identities = 585/1333 (43%), Positives = 837/1333 (62%), Gaps = 63/1333 (4%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQA-IFQEMAKEIDQAAGKVLLREAARPEITYP 74 + +M +DR R++ +++ + ++ A + +E+ I + KV R PEI Y Sbjct: 1 MQDVMSKDRYHIERKVQLIERQQKSNSLDANLVEEVKAMILASQEKVRERSELVPEIKYD 60 Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 +LPV+ K + I+ +I+ +QVVIVAGETGSGKTTQLPK+C++ G G+ G+IGHTQPRRLA Sbjct: 61 QSLPVAAKAEYIIASIKANQVVIVAGETGSGKTTQLPKMCLQAGLGVAGMIGHTQPRRLA 120 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 AR+VA+RI++EL E G +G++VRF+D SD T+VKLMTDGILLAEIQQD+ L +Y I Sbjct: 121 ARSVADRISDELGVELGDEVGFQVRFNDESSDKTLVKLMTDGILLAEIQQDKFLQKYQAI 180 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 IIDEAHERSLNIDFLLGYLK +LP RPDLKII+TSATID RFS+HFN+AP+ EVSGRT+ Sbjct: 181 IIDEAHERSLNIDFLLGYLKRILPSRPDLKIIVTSATIDVARFSKHFNDAPVFEVSGRTF 240 Query: 255 PVEVRYRPIVEEADDTERDQ----LQAIFDAVDELSQESH-------GDILIFMSGEREI 303 PVE+RY+P++ ++D E D Q I DAV + E DIL+F+ GEREI Sbjct: 241 PVEIRYQPLLLKSDSEEVDADQSMEQGIVDAVHTIIHEEKLSSFRGASDILVFLPGEREI 300 Query: 304 RDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYV 363 R+TA+ L + LRHTE++PLYARLS+SEQ ++F+SHSGRRIVL+TNVAETSLTVPGI+YV Sbjct: 301 RETAELLRREELRHTEVVPLYARLSSSEQQKIFKSHSGRRIVLSTNVAETSLTVPGIRYV 360 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEF 423 IDPG ARISRYS R+KVQ+LPIE ISQASANQR GRCGRV++GICIRLY E D+ +R EF Sbjct: 361 IDPGVARISRYSVRSKVQQLPIEKISQASANQRAGRCGRVADGICIRLYDEADYQARAEF 420 Query: 424 TDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA 483 TDPEI RTNLASVILQM L LG + F FVE PDKR I DG R L ELGAI + Sbjct: 421 TDPEIFRTNLASVILQMANLRLGAVEKFSFVEMPDKRLINDGYRALNELGAINKE----- 475 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +LTP+GRQL++LP+DP+L RM++ A K G + E II SAL+IQDPRERP +K+ SD+ Sbjct: 476 -RLTPIGRQLAKLPIDPKLGRMIIAADKLGVLNEIAIIVSALTIQDPRERPQEKKTQSDQ 534 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H D +SDF+ +NLW+ EQ++ALS N R+ CR +LNY+R+REW+DI+ Q+ Sbjct: 535 AHAVDKDADSDFVVLLNLWHRFEEQRQALSQNHLRQFCRKQFLNYMRMREWRDIHRQILI 594 Query: 604 VVKELGIPVNSEPA----------------------------------------EYREIH 623 K+LG + +Y +H Sbjct: 595 SCKQLGFKESQSKPQENENKKQAIQSQKHKANHVSAKSNVSEALEEPASSKPSVDYERVH 654 Query: 624 IALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRI 683 ALL GL + I K + +E+ R+ + IFPGS LFKKPP+WVM AE+VET++L+GR+ Sbjct: 655 RALLAGLFTQIANKLDETKEFVACRSRKMHIFPGSVLFKKPPQWVMSAEMVETTKLYGRV 714 Query: 684 AARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPA 743 +A+++P WVE A+ +KR Y +PHWE+ QG VMA E+V++YGL +VA R+V+YS+++P Sbjct: 715 SAKMEPLWVEEYAKPFVKRQYFDPHWEKKQGRVMAYEQVSLYGLILVAKRRVDYSRVNPD 774 Query: 744 LCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRI 803 RE+FIR ALVEG+ +TRHAFF++N L +EE E K R RDILVDDE +F FY ++I Sbjct: 775 EAREVFIRSALVEGEMRTRHAFFQQNQDLIKTIEEDEAKLRTRDILVDDEVVFAFYQKQI 834 Query: 804 SHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSY 863 ++ + + + W K + L + L+K+ + I +P + + L + Y Sbjct: 835 PDEICNQKSLEFWLKS----NQEALTLTRKDLVKQEVD-IDNTAFPTSFGLNGVNLPIEY 889 Query: 864 QFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPN 923 QFEPG DG T+ +P+ LL Q+ W +PG +E A +++LPK +RR FVP P Sbjct: 890 QFEPGKAVDGATLKVPVGLLRQLSADELSWAVPGYIKEKCEAYLRALPKALRRRFVPIPQ 949 Query: 924 YAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKL 983 + + + + LL+ L +++R T + + +W +++ +L + V+ D+ K + Sbjct: 950 FVDRIYPNLSSTKGDLLEQLSLQIKRETLIDIPLTEWQGEKLEAYLNLNIEVISDQGKII 1009 Query: 984 KEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPA 1043 G++L +L+ +V E+ + E+ GL W +PE + KV A+PA Sbjct: 1010 GTGKALDELQTKFAAQVDESFAKFGTKAHEEKGLTNWPDQDVPEQQTLSQAGIKVTAFPA 1069 Query: 1044 LVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 LV ++V++K+FD+ + G+ LL +++ +KYL + LP + L F P G Sbjct: 1070 LVSNDETVSVKMFDDKATALETHRKGVIALLRISLSKDMKYLEKNLPKLRESLLIFAPIG 1129 Query: 1104 KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 K L+DD ++ +DK+ T E F K + +L ++A Q+ Q+L++ Sbjct: 1130 KKELLLDDLLNAVLDKVFVDGQTLPRTREEFDQTLLKNKPQLVTLANEMALQLHQVLSSY 1189 Query: 1164 FNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 + K++KG + + D+K Q+G L+Y GF+ LG RY + IE RL++ Sbjct: 1190 QKVAKQMKGNIPLPWTRVYGDLKQQLGNLIYPGFIGDTPLFWLGQLPRYFKGIEVRLDRF 1249 Query: 1224 AVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTP 1283 +++ A + E + Q++ + D ++ + RW++EE RVS FAQ +GT Sbjct: 1250 QNHLNKENALVTHCEQLWQSYAKQKQGHDAKNVYDPELLKYRWLMEEYRVSLFAQNVGTL 1309 Query: 1284 YPISDKRILQAME 1296 P+S+KR+ + + Sbjct: 1310 EPVSEKRLQKQWQ 1322 >UniRef50_B2U9W9 ATP-dependent helicase HrpA n=11 Tax=Betaproteobacteria RepID=B2U9W9_RALPJ Length = 1333 Score = 1500 bits (3885), Expect = 0.0, Method: Composition-based stats. Identities = 595/1315 (45%), Positives = 844/1315 (64%), Gaps = 58/1315 (4%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIR 91 P +Q E +A R P IT+P+ LPVS ++ +I +AI Sbjct: 29 RKPGGNARPQRRQKPTPEELAAALEARRARANR---VPPITFPEALPVSARRDEIAQAIA 85 Query: 92 DHQVVIVAGETGSGKTTQLPKICM----ELGRGIKGLIGHTQPRRLAARTVANRIAEELK 147 +QVVIV+GETGSGKTTQLPKIC+ +G G GLIGHTQPRR+AA + A RIA+E+ Sbjct: 86 ANQVVIVSGETGSGKTTQLPKICLSIGRGIGAGGTGLIGHTQPRRIAATSTAKRIAQEIG 145 Query: 148 TEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNID 207 T G +G++VRF+D +S VKLMTDGILLAE Q D LL YDTIIIDEAHERSLNID Sbjct: 146 TPVGEHVGFQVRFNDTLSAGASVKLMTDGILLAETQNDPLLRAYDTIIIDEAHERSLNID 205 Query: 208 FLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----NNAPIIEVSGRTYPVEVRYRPI 263 FL+GYLK+LLPRRPDLK+IITSATID +RF+ HF AP+IEVSGR YPVEVRYRPI Sbjct: 206 FLIGYLKQLLPRRPDLKLIITSATIDAKRFAEHFAGPKGPAPVIEVSGRLYPVEVRYRPI 265 Query: 264 VEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPL 323 + D ERD +A+ DAVDEL++E GD+LIF+ GEREIR+ A+AL K + HTEILPL Sbjct: 266 QRDEKDKERDLYEALVDAVDELAREGPGDVLIFLPGEREIREAAEALRKHHPAHTEILPL 325 Query: 324 YARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383 +ARLS EQ RVF+ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L Sbjct: 326 FARLSVQEQERVFRPSNARRIVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQL 385 Query: 384 PIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTAL 443 IEP+SQA+ANQR GRCGRV++G+CIRLY E DF++RP FTDPEILR++LA+VIL+M AL Sbjct: 386 QIEPVSQAAANQRAGRCGRVADGVCIRLYDEADFIARPRFTDPEILRSSLAAVILRMKAL 445 Query: 444 GLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLA 503 L D+ FPF+E P R I DG +LL+ELGA+ + LTPLG+Q+++LP+DPR+A Sbjct: 446 RLTDVEQFPFIEPPLGRAIADGYQLLQELGAVDDEN-----ALTPLGKQVARLPLDPRVA 500 Query: 504 RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN 563 RM+L + H C+RE +II SALS+QDPRERP + QQ +D+ HR+F D++S+FL +V LW Sbjct: 501 RMILAGRDHQCLREMLIIASALSVQDPRERPQELQQQADQAHRQFADEKSEFLGWVKLWK 560 Query: 564 YLGEQ-QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREI 622 + E S+ + CR+ +L+++R+REW+D+++QL V E G +N Y ++ Sbjct: 561 WFEEAVAHKKSNKQLQEQCRSHFLSHVRLREWRDVHSQLHTTVAEQGWKLNESDPTYEQL 620 Query: 623 HIALLTGLLSHIGMK----DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 H+ALLTGLL +IG++ D +EY GAR +F ++PGS + +K KWV+ EL+ETSR Sbjct: 621 HLALLTGLLGNIGVRIEEADGKGREYLGARGIKFFLWPGSVIARKAGKWVVGGELIETSR 680 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYS 738 L+GR ARI+PEWVE V HL+K ++S+PHWE+ G VMA E+ T+YGLPI R+V++ Sbjct: 681 LFGRTLARIEPEWVEKVGAHLLKVSWSDPHWEKKAGQVMAFERGTLYGLPIYQQRRVHFG 740 Query: 739 QIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF 798 + P RE+FIR ALV+G+++TR FF N +L E+E LEHKSRR+D+LVDDE ++ F Sbjct: 741 PMQPKEAREMFIRRALVDGEFETRLPFFTHNQRLVREIENLEHKSRRQDVLVDDELIYAF 800 Query: 799 YDQRISHDVISARHFDSWWKKVS----RETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQ 854 YD +I D+ + F+ W+ + + + LL + L++ A I+ +P Sbjct: 801 YDSQIPADIYNTVSFERWYAEAASAGGKSGQKLLYLNRDDLMRHEAAGITTDLFPKVLPI 860 Query: 855 GNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV 914 + + L+Y FEPG+ DGVT+ +PL LNQV EW +PG+ +E V L+KSLP+ + Sbjct: 861 AGIDMGLTYHFEPGSPRDGVTLTVPLYALNQVPAQRTEWLVPGMLKEKVHLLLKSLPQKL 920 Query: 915 RRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFR 974 RR+ VP P+YA F+ RV+ + LLD L ++R TG+ + R D+ + +P H + F+ Sbjct: 921 RRHCVPLPDYAAGFVARVRLGDGDLLDRLIADVREQTGMALKRADFKLETLPAHHFMNFK 980 Query: 975 VVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSG------------------ 1016 V+D+ ++L GR+L L+ L G+ Q+T ++A +G Sbjct: 981 VIDEHGRQLDMGRNLAQLRAELGGRAQQTFQSIAAQDAAVAGTPSEGTKAGQAGKSGKAE 1040 Query: 1017 ----------LHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAM 1066 L W+FG+LPE E ++G+ + +PALVD D +++FD+P + + Sbjct: 1041 APANAALYSGLTTWNFGELPELLEVRKGSQTLFGYPALVDAGDHCDVEVFDDPAQATRIH 1100 Query: 1067 WNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG 1126 GLRRL + + P+KYL + +P +++ + F G +L D + +++ + Sbjct: 1101 GLGLRRLFAIQLREPLKYLEKNIPGLSQMAIQFMNLGTQDDLRDQILDATLERACLQDPL 1160 Query: 1127 PVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIK 1186 P+ + F A ++ RA L +IA+ V IL + ++L+ + A +DI Sbjct: 1161 PI-DDASFGARKDESRARLTLLAQEIARLVGAILAEYAQLPRKLQ--IAKPFAAATADID 1217 Query: 1187 AQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQ 1246 AQ+ L+++ F+ + +L RYL+ I R++KL DP RD +M ++ + Q +Q+ Sbjct: 1218 AQLKTLMHKRFIEATPYAQLTHFPRYLKGIALRIDKLKADPARDTQRMQEMAPLIQQYQR 1277 Query: 1247 WINKLP--PARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 L D ++E RWM+EELR++ FAQ+L TP P+S KR+ + E + Sbjct: 1278 AEKALRVQGQGGNDPRMEEFRWMLEELRIALFAQELRTPVPMSVKRLQKVWESMQ 1332 >UniRef50_A4BTJ3 ATP-dependent helicase HrpA n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTJ3_9GAMM Length = 1294 Score = 1500 bits (3883), Expect = 0.0, Method: Composition-based stats. Identities = 588/1294 (45%), Positives = 827/1294 (63%), Gaps = 11/1294 (0%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 F L+ +L L F RRL+G+ ++ + + + ++ + R+ Sbjct: 9 RPFQELKTQLTRLPRAWVPTFRRRLYGLERRQRQGRPFEQGLNRLKHDLANVQQRYEQRQ 68 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 + + + LP+ ++ +I A+ HQV++V G+TGSGK+TQLP+I + G G++G+I Sbjct: 69 SQVLQPAFSAALPIMDQRAEIARALSAHQVIVVCGDTGSGKSTQLPQIALASGFGVEGMI 128 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 HTQPRR+AAR++A RIAEEL TE G +GYKVRFSD V +T +KL+TDG+LLAE Q D Sbjct: 129 AHTQPRRIAARSLATRIAEELNTEVGAGVGYKVRFSDRVRFSTRLKLVTDGMLLAETQGD 188 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 L YDTIIIDEAHERSLNID+LLGYLK LLPRRP+LK+IITSATIDP+RFSR+FN AP Sbjct: 189 PDLAHYDTIIIDEAHERSLNIDYLLGYLKRLLPRRPELKVIITSATIDPQRFSRYFNGAP 248 Query: 246 IIEVSGRTYPVEVRYRPIV-EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIR 304 II+++GR+YPVE+RYRP+V E+ D+ +R +AI +A+DEL+ E+ GD+L+F+ ER+IR Sbjct: 249 IIQIAGRSYPVEIRYRPLVSEDEDERDRSLPEAILEALDELAAETAGDVLVFLPSERDIR 308 Query: 305 DTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVI 364 +TA+ L K + TE+LPL+ RLS +EQ RVF H RRIVLATNVAETSLTVPGI++V+ Sbjct: 309 ETAENLRKHHPPRTEVLPLFGRLSATEQLRVFAPHDRRRIVLATNVAETSLTVPGIRHVV 368 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G ARISRYSYRTKVQRLPIEPIS+ASA+QR GRCGR + G+CIRLY+E D+ R EFT Sbjct: 369 DSGLARISRYSYRTKVQRLPIEPISRASADQRAGRCGREAPGVCIRLYAEADYQVRAEFT 428 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 +PEILRTNLASVILQM L LG+I F F++ PD R I+DG++LL ELGA+ D Sbjct: 429 EPEILRTNLASVILQMKYLKLGEIERFDFIDPPDSRAIRDGLKLLYELGAVAADN----- 483 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT LGR+L+ LPVDPR+ARM++ + + E ++I +ALSI DPR+RPM+ QA+D Sbjct: 484 TLTGLGRRLAALPVDPRIARMLVAGETERALNEVLVIAAALSIPDPRQRPMNAPQAADAA 543 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 R+ D+ SDFLA V LWN EQ + LS R C +L+Y+R+REW+DI+ QLR++ Sbjct: 544 QARWRDQRSDFLALVKLWNDAQEQTRELSQRKLRLWCAEHFLSYVRLREWRDIHHQLREL 603 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 V +G N++ A+ +H ALLTGLL +I + D+Q YTGAR + IFPGSG+ K+ Sbjct: 604 VMGIGWRENAQQADTAAVHRALLTGLLGNIAWRT-DEQHYTGARGLKLLIFPGSGIAKRR 662 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTV 724 P+W++ AELVETSR++ R I PEWVEP+A HL++R Y EP WE +G V E VT+ Sbjct: 663 PRWIVAAELVETSRIFARTVGEIRPEWVEPLAAHLVQRRYFEPFWEEKKGRVAGYESVTL 722 Query: 725 YGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSR 784 YGLP+VA RK++Y+++DPA R LFIR LV G +T+ F N +L AE+E LE KSR Sbjct: 723 YGLPLVARRKIDYTRVDPAAARALFIREGLVYGRLRTQGRFLAHNRQLIAEIEALEAKSR 782 Query: 785 RRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKIS 844 RRD+LVD++ L FY +R+ D+ F+ W ++ + L +L++ A +I+ Sbjct: 783 RRDVLVDEDVLAAFYAERLPADLADGASFERWIRRPEHDQ--ALFMTPQLLMEREAVEIT 840 Query: 845 KLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVI 904 YP G ++L L Y F+ ADGVTV +PL LNQ+ FEW +PGL +E V+ Sbjct: 841 ADAYPEHLSVGGMRLPLRYHFDLNQAADGVTVIVPLAALNQLALERFEWLVPGLLQEKVV 900 Query: 905 ALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQ 964 ALI+SLPK +RRNFVP P +A A L L+ + EL+RMTGV + + W + Sbjct: 901 ALIRSLPKRLRRNFVPVPEFAAAILAAAPQGTGSLIQVVRDELKRMTGVLIPFDAWENVE 960 Query: 965 VPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQ 1024 + HL++ FRVVD + + EGR L L+ L + + A + GL W F Sbjct: 961 LAAHLQMNFRVVDTHGRTVGEGRDLAALQRELGTCARVQ-AGDARHRWGRRGLQRWDFDT 1019 Query: 1025 LPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKY 1084 L E E ++ +PA+VDE +SVA+ L D+P + + G+R+L +L +P KY Sbjct: 1020 LDEHVEFNDAGITLRGYPAVVDEGESVALHLLDSPEQAARTSLGGIRKLFMLQLPDQAKY 1079 Query: 1085 LHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 L KLP +L L ++ G D ++ ++ +G T E F A + R E Sbjct: 1080 LRRKLPGIDRLCLLYSVLGSCEAFKQDFLAATYQRVFMPDGTLPRTREAFQARLQAGREE 1139 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 L T +A+ + Q+L +R K + D++ Q+ +VY GFV + Sbjct: 1140 LIPTATRLAQTLLQVLEHYQEARQRFKAPLPPAQLESYRDMREQLDAMVYAGFVQDTPSE 1199 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 LG+ RY++A+ +RLE+L DP +DR + + + + +++ + ED ++ Sbjct: 1200 WLGELPRYMRALVRRLEQLRRDPGKDRRGLQAIRPLWEQYRRRREQHARQGTEDLQLEHY 1259 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RW++EE RVS FAQ+LGT +S+KR+ A +++ Sbjct: 1260 RWLLEEYRVSLFAQELGTREKVSEKRLRTAWQRV 1293 >UniRef50_A4VNQ0 ATP-dependent helicase HrpA n=32 Tax=Proteobacteria RepID=A4VNQ0_PSEU5 Length = 1425 Score = 1498 bits (3879), Expect = 0.0, Method: Composition-based stats. Identities = 630/1362 (46%), Positives = 842/1362 (61%), Gaps = 81/1362 (5%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 L + LD + DR R R+LH ++K + +A + + +A KV R + Sbjct: 74 AIDTLLKNLDQALFADRHRLRRQLHELRKQPD----EARLAQWLERFQASAAKVEARRQS 129 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P I Y D+LP++ K+ +I A+ HQV+++AGETGSGKTTQLPKIC+E+GRG+ GLIGH Sbjct: 130 VPRIRYDDSLPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLIGH 189 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRRLAAR+VA R+AEEL G +GY+VRF D ++ T++KLMTDGILLAE Q DR Sbjct: 190 TQPRRLAARSVATRVAEELGAPLGELVGYQVRFEDQSTERTLIKLMTDGILLAETQHDRF 249 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L +YDTII+DEAHERSLNIDFLLG+LK LLPRRPDLK+IITSATID ERFS HF+ API+ Sbjct: 250 LEKYDTIIVDEAHERSLNIDFLLGFLKTLLPRRPDLKVIITSATIDLERFSEHFDGAPIV 309 Query: 248 EVSGRTYPVEVRYRPIVEEADDT----ERDQL--QAIFDAVDELSQES------HGDILI 295 EVSGRTYPVE YRP+ E D+ E D Q I A+DE++ GD+L+ Sbjct: 310 EVSGRTYPVETWYRPLAAEIDEDGNRVEDDLTVDQGILAALDEIAAHERSVGQRPGDVLV 369 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 F+ GEREIRD A+ L K NL+ TE+LPLYARL+ +EQ ++FQ GR+IVLATNVAETSL Sbjct: 370 FLPGEREIRDAAEVLRKANLKFTEVLPLYARLTPAEQQKIFQPRPGRKIVLATNVAETSL 429 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI+YVID GTARISRYSYR KVQRLPIE +SQASANQRKGRCGRV GICIRLYSE+ Sbjct: 430 TVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYSEE 489 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DFL RP FTDPEILRTNLA+VILQM L LGDI FPF+E PD + I DG LL+EL A+ Sbjct: 490 DFLGRPAFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELSAV 549 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 + Q LTPLGRQL++LP+DPRL RM+LEA + G + E +I+ SALS+QD RERP Sbjct: 550 NRENQ-----LTPLGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDVRERPA 604 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 D+QQA+D+ H ++ D +SDF A +NLW EQ++AL SNA R CR ++LNYLR+REW+ Sbjct: 605 DRQQAADQAHAQWKDPDSDFAALINLWRGFEEQRQALGSNALRSWCRKNFLNYLRLREWR 664 Query: 596 DIYTQLRQVVK--ELGIPVNSEP------------------------------------- 616 D + QL + + +LG P +S Sbjct: 665 DAHRQLTLIARELKLGAPADSRGQGRPQKGEARGSALDRGTTAAAPSAEAPAPTKDNKVN 724 Query: 617 ----------------AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 Y +H A+L GLLS IG K + + GAR RF + PGS + Sbjct: 725 AIVRQQVEASEAAQKAKSYAAVHKAILAGLLSQIGNKTEEGD-FLGARQRRFWVHPGSSI 783 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 +K P W+M AELVET++L+ R+ A+I+P+W+EP+A HL+K+ + EPHWE+ +G V+A E Sbjct: 784 GRKKPNWLMAAELVETTKLFARMVAKIEPDWIEPLAGHLVKKNHFEPHWEKKRGQVVAYE 843 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +VT+YGL +V R V+Y IDP RELFIR LV G+ +R N +L ++ELE Sbjct: 844 QVTLYGLIVVGRRPVHYGPIDPPAARELFIREGLVRGEINSRARALTANRELLERMDELE 903 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 K+RRRDIL D+ETLF +YD R+ D+ F++W+K+ S++ P LL + ++ A Sbjct: 904 AKARRRDILADEETLFGYYDARLPADIYQTASFETWYKRESQKNPQLLIMREEDVLAREA 963 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 +++ YP+ G L+L L Y FEP DGVT+ +P PLL Q+ +W +PGL Sbjct: 964 SEVTASQYPDHLRIGELQLPLEYHFEPNHPRDGVTLRVPAPLLPQLRRERLDWLVPGLIE 1023 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW 960 +AL++ LPK +R+NFVP P++ A L ++ E L ++L REL RMTG V E W Sbjct: 1024 AKAVALVRGLPKAIRKNFVPVPDFVGAALAKITFGEGALSEALGRELTRMTGARVPDEAW 1083 Query: 961 HWDQ--VPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 + +HLK+ VVD + K L EGR L +L Q L A EQ + Sbjct: 1084 AEAAAGLENHLKMNIEVVDARGKFLGEGRDLAELTARFAEASQAAL-APPQQKAEQKPVE 1142 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 F Q+ E + K + +PALV+E V F E + L+RLLL + Sbjct: 1143 AKGFAQVAEKAQAKMAGLSMTVYPALVEEAGVVKEGRFPTQAEAEWQHRRALQRLLLQQL 1202 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDK-LIDANGGPVWTEEGFAAL 1137 P KYL +LP +LGL + GKV L++D + +D ++D A+L Sbjct: 1203 AEPAKYLRNRLPGLTELGLLYRDMGKVDALVEDILLASLDSCILDGEAALPRDGAALASL 1262 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 E+ R + +A+ +IL + KR KG++D+ A+ L+DIKAQ+ LVY GF Sbjct: 1263 AERKRGDWTAHAERLARLTLEILKHWHGLQKRFKGKIDLAQAVALNDIKAQLAHLVYPGF 1322 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 V + L + RYL+A+E+R +K+ RDR ++ + +Q +NK + Sbjct: 1323 VRETPAEWLKEYPRYLKAVEQRFDKIGAQLQRDRVWSGELGGYWEQYQARLNKHQQEGKR 1382 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 D + RWM+EE RVS +AQQLGT P+SDKR+ + Q+ Sbjct: 1383 DPQLALYRWMLEEYRVSLWAQQLGTKVPVSDKRLNKQWSQVE 1424 >UniRef50_C5BR02 ATP-dependent helicase HrpA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BR02_TERTT Length = 1353 Score = 1493 bits (3865), Expect = 0.0, Method: Composition-based stats. Identities = 606/1349 (44%), Positives = 843/1349 (62%), Gaps = 64/1349 (4%) Query: 4 QQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKN-PDAQQAIFQEMAKEIDQAAGKVL 62 ++ + D+L + D+ R + ++K + + +D A ++ Sbjct: 9 AANDLLAHVRTQFDALCVDDKHRLQGLVRHIEKRLSLQKPCDRDLDRLTDRLDAALARIA 68 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 R P ++ D LP+S K+ +I I +QVVI+AGETGSGKTTQLPKIC+ELGRG++ Sbjct: 69 ERTRNAPTPSFDDALPISAKRDEIKSLIEANQVVILAGETGSGKTTQLPKICLELGRGLR 128 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 G+IGHTQPRR+AARTVA+RIA+EL+ + G +GY+VRF+DH + T +KLMTDGILLAEI Sbjct: 129 GMIGHTQPRRIAARTVASRIADELQVQLGSEVGYQVRFTDHSNSATHIKLMTDGILLAEI 188 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 QQD LL +YDT+IIDEAHERSLNIDFLLGYLK +L +RPDLK+I+TSATID ++F+ HF+ Sbjct: 189 QQDPLLYKYDTLIIDEAHERSLNIDFLLGYLKGVLKQRPDLKLIVTSATIDLQKFAAHFS 248 Query: 243 N-----APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ---ESHGDIL 294 + AP+IEVSGRTYPVE YRP DD +D +AI A++E+ +S GDIL Sbjct: 249 DQDGKPAPVIEVSGRTYPVETLYRP----WDDDYQDINEAIVGAIEEILTMPHKSDGDIL 304 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS 354 +F+SGEREIR+ + A+ K + RH EILPLYARLS +EQNRVFQ+H GRR+VLATNVAETS Sbjct: 305 VFLSGEREIREASHAIKKADFRHLEILPLYARLSLAEQNRVFQAHRGRRVVLATNVAETS 364 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LTVPGI YVIDPG ARISRYS RTKVQRLPIE ISQASANQRKGRCGRVS G+CIRLY E Sbjct: 365 LTVPGIGYVIDPGRARISRYSVRTKVQRLPIEAISQASANQRKGRCGRVSNGVCIRLYDE 424 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 DFL RPEFTDPEI RTNLA+V+LQM L +GD+ F FV+ P+ R I DG +LLEE+ A Sbjct: 425 ADFLGRPEFTDPEIQRTNLAAVVLQMLQLRIGDVRKFDFVDRPENRLINDGFKLLEEIQA 484 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + K+T LGRQL LP+DPR AR++L +H C+RE +II S LSIQDPR+RP Sbjct: 485 VD-----RKGKITALGRQLYSLPLDPRFARIILAGAEHNCLREILIIVSGLSIQDPRDRP 539 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 +K+QA+DEKHRRF D+ SDFL F NLWNY+ EQ++ LS N ++LC+ +++NYLRVREW Sbjct: 540 AEKRQAADEKHRRFWDENSDFLGFYNLWNYIEEQRQELSQNQLQKLCKKEFINYLRVREW 599 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQE----------- 643 +D++ QLR +K LG+ N++PA Y +H AL+ GLLS++G+K + + Sbjct: 600 RDLHHQLRLAIKGLGLKENADPANYENVHRALVVGLLSNLGLKQEEAAKPGNKKEGGRPQ 659 Query: 644 ----YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHL 699 Y G+RN RF IFPGS FKK PKW+ AE +ET++L+ +AA+++P W A+HL Sbjct: 660 QAFSYHGSRNRRFQIFPGSSQFKKRPKWLAAAEFIETTQLYAHMAAKVEPLWALDAAEHL 719 Query: 700 IKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDW 759 +K Y EP ++ QG VMA +++T++GLP+V ++V YS+++ RE+FIR ALVEG + Sbjct: 720 VKHHYHEPFYDATQGQVMAYDRITLFGLPLVEKQRVQYSKVNREESREVFIRQALVEGHY 779 Query: 760 QTRHA----------------------------FFRENLKLRAEVEELEHKSRRRDILVD 791 FF N L A VE LE KSRRRDILVD Sbjct: 780 WRNKRTKKAVETARVNWQKANQYGAGDLASIDHFFVYNEALSARVESLEAKSRRRDILVD 839 Query: 792 DETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNF 851 D+ +F+FYD + D+ + F+ W K+ LL ++ L+ A I+ +P+ Sbjct: 840 DQVVFDFYDAVLPADIANLASFEHWRKQEEMTNAQLLRMDQESLMLHSAGDITGAQFPDA 899 Query: 852 WHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLP 911 + L L Y FEPG DGV+V +P+ L+ V ES +W +PGL RE IAL+K+LP Sbjct: 900 IELDGVTLPLRYHFEPGDPDDGVSVCVPVDFLHMVPESRLQWLVPGLLREKCIALVKALP 959 Query: 912 KPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKI 971 KP+R+ VP P + + L R+ P+ PL +L E R + + + + W ++ ++ Sbjct: 960 KPLRKQLVPVPQFVDRALARLAPVNQPLTTALAAEFRHLANIEIPDDAWQTGELDPFYRM 1019 Query: 972 TFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQ 1031 +VVDD+ + R + LK+ + +V+++L + A+ +E++ + W FG+LP Sbjct: 1020 NIQVVDDRGAVIDRSRDIVSLKEQYRSQVKKSL-SQANHALERNDIAQWDFGELPSQVTI 1078 Query: 1032 KRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPN 1091 R +VK +PALVD + V + + DNPL+ ++ G RL L + +KYL ++L Sbjct: 1079 PRNGVEVKGFPALVDMANHVKLTVVDNPLDARRETRRGTLRLAALELSQTVKYLSKQLLK 1138 Query: 1092 KAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVD 1151 LGL G ++I+D I + + V ++ F A + R+EL + Sbjct: 1139 GRDLGLAVLDIGTRDQVIEDIIFAAIQRACFNEQPWVADQQAFKAKLDHGRSELVTIAQE 1198 Query: 1152 IAKQVEQILTAVFNINKRLKG-RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTL 1210 + + L+ +I K +K + + +A DI+ Q L GF++ ++ L Sbjct: 1199 YEAVLAECLSLSISIKKAMKSNKNALLLAFTFGDIQHQFQQLFAAGFMSDTPWQWLQHYP 1258 Query: 1211 RYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL-PPARREDEDVKEIRWMIE 1269 RYLQAI R+EK +P RDR Q +E Q + + K+ +E RWM+E Sbjct: 1259 RYLQAILVRMEKAPQNPQRDRVQCAALETHWQRHEDLLRKVGHGHYTSSPAWQEYRWMME 1318 Query: 1270 ELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 ELRVS FAQ L T P+SDKR+ +++ Sbjct: 1319 ELRVSLFAQTLKTLMPVSDKRLNNQWQKV 1347 >UniRef50_C1DAE5 HrpA n=2 Tax=Betaproteobacteria RepID=C1DAE5_LARHH Length = 1290 Score = 1490 bits (3859), Expect = 0.0, Method: Composition-based stats. Identities = 596/1266 (47%), Positives = 828/1266 (65%), Gaps = 16/1266 (1%) Query: 37 VKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVV 96 +K + ++ +A KV R P + + LPV+QK+ ++L AI +QVV Sbjct: 35 IKAGKPADRLAAQLLAAAQASADKVAARRERLPVPAFDEALPVNQKRDELLAAIDANQVV 94 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 IV GETGSGKTTQLPK+C++LGRG +GLIGHTQPRRLAAR+VA+RIAEEL T+ G +G+ Sbjct: 95 IVCGETGSGKTTQLPKLCLQLGRGTRGLIGHTQPRRLAARSVASRIAEELGTQIGQGVGF 154 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 KVRF+D SD + +KLMTDGILLAE Q DR L YDT+IIDEAHERSLNIDFLLGYL++L Sbjct: 155 KVRFTDRTSDQSFIKLMTDGILLAETQTDRYLEAYDTLIIDEAHERSLNIDFLLGYLRQL 214 Query: 217 LPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE-EADDTERDQL 275 LPRRPDLKIIITSATID ERFSRHFN AP+IEVSGRTYPVEVRYR + E + DD + Sbjct: 215 LPRRPDLKIIITSATIDAERFSRHFNGAPVIEVSGRTYPVEVRYRALGEKDEDDRDLAME 274 Query: 276 QAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR-HTEILPLYARLSNSEQNR 334 AI DAVDEL++ GDIL+F+ GEREIRDTA+AL K L E+LPL+ARLSN EQNR Sbjct: 275 DAIVDAVDELARLGSGDILVFLPGEREIRDTAEALRKARLTVRYEVLPLFARLSNEEQNR 334 Query: 335 VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 +F+ +GRRIVLATNVAETSLTVPGI+YVID G ARI RYS R KV++L +E ISQA+A Sbjct: 335 IFKGSNGRRIVLATNVAETSLTVPGIRYVIDTGLARIKRYSPRAKVEQLLVEKISQAAAR 394 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GRCGRV+ G+CIRLY+EDDF +RP FTDPEI+R+NLA+VIL+M +L LG + FPF+ Sbjct: 395 QRAGRCGRVAAGVCIRLYAEDDFNARPAFTDPEIVRSNLAAVILRMASLRLGAVVEFPFI 454 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 + P R I DG +L ELGA++ +LTPLGR+L+++PVDP++ RM+L A+ + C Sbjct: 455 DPPSARLIADGYDVLHELGAVSE-----RGELTPLGRELARIPVDPKIGRMLLAARDYHC 509 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALS 573 +RE +++ SALSIQDPRERP D ++A++ RF D+ SDFL F+ LW++ + + S Sbjct: 510 LREMLVLVSALSIQDPRERPFDAREAAERAQARFADERSDFLGFLALWDFFDDALKHKKS 569 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSH 633 + LC + +L++LR+REW++++ QL Q+ +L + N PA + ++H ALLTGLL + Sbjct: 570 NRQLVELCHSHFLSHLRLREWRELHGQLAQIAHDLELRENQTPATFEQLHKALLTGLLGN 629 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 +GMK + +Y GAR F +FPGSGL K PKW++ EL ETSRL+ R ARI+PEW+E Sbjct: 630 LGMKSMEGDDYLGARGIHFHVFPGSGLKKSKPKWLVAGELTETSRLYARTVARIEPEWIE 689 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 P+A HL+KR Y EPHWE+A+G V+A+E+VT+YGL IV R V+Y +ID R++F+R A Sbjct: 690 PLAMHLVKRHYFEPHWEKARGEVVASERVTLYGLNIVPRRTVSYGRIDATEARQIFVREA 749 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 L G T+ FFR N +L EVEELEHK+RR+D+LVD+ETL FYD+RI D+ AR F Sbjct: 750 LANGQLHTQAPFFRHNQRLIREVEELEHKARRQDVLVDEETLVAFYDERIPADICDARSF 809 Query: 814 DSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADG 873 D+W + + P LL ++ L++ AE I++ +P + + +LRL Y+FEP DG Sbjct: 810 DAWREGAEKADPKLLFLDRDYLMQHAAEHITEEQFPEWLDTPDGRLRLRYRFEPNHPLDG 869 Query: 874 VTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK 933 VTV +PL +LN++E + EW +PG+ RE + LIK+LPK +RR VP P++ FL Sbjct: 870 VTVDVPLAILNRLEPARLEWLVPGMIREKLALLIKALPKQIRRACVPVPDFVTRFLSTGP 929 Query: 934 PLELPLLDSLERELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDL 992 + P+ L R + R T GV VD + ++P H ++ RV+DD ++L GR L L Sbjct: 930 RQDQPVGPQLARFILRETGGVEVDPAAFEAAELPAHARMNLRVLDDGRQELGMGRDLVTL 989 Query: 993 KDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVA 1052 + + T + E+ + W G LPES + RG ++ +PAL E D VA Sbjct: 990 QKQFGTAAELTF-RDSTHEFERDDVQGWDVGNLPESIQFARGRQQLTGYPALACEEDRVA 1048 Query: 1053 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC 1112 ++LFD P + + A G+ RLL + +K L + LP ++ L L+DD Sbjct: 1049 LRLFDTPEKARAAHRQGVVRLLRRELKEHMKQLAKGLPGFTQIALQLRGVASADALLDDA 1108 Query: 1113 ISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKG 1172 ++C D+ + +++ F ++ R L + + + I ++ Sbjct: 1109 VACICDRAFIGDDDAPRSQKAFDEQKKRARTRLPAVTQAVTQYLTAIAAEYTK-TTQMAD 1167 Query: 1173 RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1232 + + +I+A LVY GF+ + +L + RYL+A + R++K A + RD Sbjct: 1168 KHRLG-PKLGPEIRA----LVYPGFLAATPWAQLPNLPRYLKAKQLRMDKYASNSQRDGQ 1222 Query: 1233 QMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 + +V + Q W + +L + +++ RW+IEELRVS FAQ+L TP+P+S KR+ Sbjct: 1223 RGAEVAALWQRWADKVAELDAREGAPQALRDFRWLIEELRVSLFAQELKTPFPVSVKRLE 1282 Query: 1293 QAMEQI 1298 +A + Sbjct: 1283 KAWADL 1288 >UniRef50_Q1QXI6 ATP-dependent helicase HrpA n=17 Tax=Gammaproteobacteria RepID=Q1QXI6_CHRSD Length = 1325 Score = 1486 bits (3849), Expect = 0.0, Method: Composition-based stats. Identities = 652/1327 (49%), Positives = 876/1327 (66%), Gaps = 36/1327 (2%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVK-KVKNPDAQQAIFQEMAKEIDQAAGK 60 T + L+ +LD +LRD RRL + + ++ +++ + ++ + Sbjct: 6 TSDSRDQLARLRAQLDDCLLRDAHEQGRRLAKLNGRARSGKPIDRSLRDIEARLARSREQ 65 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 + R A + YPD+LPV ++++D+L A+ HQVV+VAGETGSGKTTQLPK+C+ELG G Sbjct: 66 LAARRAQPLTLRYPDDLPVVERREDLLAALDAHQVVVVAGETGSGKTTQLPKLCLELGLG 125 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 +GLIGHTQPRRLAARTVA R+AEEL G +GY+VRF+D + T+VKLMTDGILLA Sbjct: 126 RRGLIGHTQPRRLAARTVATRLAEELDVPLGAQVGYQVRFTDQTDERTLVKLMTDGILLA 185 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E Q D LM+Y+ IIIDEAHERSLNIDFLLGYLK L RRPDLKIIITSATID ERFS H Sbjct: 186 ETQNDPDLMRYEAIIIDEAHERSLNIDFLLGYLKRLTERRPDLKIIITSATIDVERFSHH 245 Query: 241 FN----NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ----AIFDAVDELSQE---- 288 F AP++EVSGRTYPV+V YRP+V +ADD E LQ + V+ + +E Sbjct: 246 FGRDGKPAPVVEVSGRTYPVDVFYRPLVRDADDEEDRTLQEGILHAVEEVETIERERRWY 305 Query: 289 -SHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 D+LIF+ GEREIR+TAD L + +L+ TEILPLYARLSN+EQNRVFQ H+GRRIVLA Sbjct: 306 SGPRDVLIFLPGEREIRETADTLRRADLKGTEILPLYARLSNAEQNRVFQPHAGRRIVLA 365 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPGI+YVIDPG R+SRYSYR KVQRLPIEPISQASA+QRKGRCGR+SEG+ Sbjct: 366 TNVAETSLTVPGIRYVIDPGLVRMSRYSYRAKVQRLPIEPISQASADQRKGRCGRISEGV 425 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLYSE+DFL+RP +T+PEI RTNLASVIL M AL LGDI AFPFV+ PD R I+DG R Sbjct: 426 CIRLYSEEDFLARPTYTEPEIQRTNLASVILSMLALKLGDIEAFPFVDVPDSRFIKDGYR 485 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL ELGA+ D +L+ LGR++++LP+DPRLARM L + G +RE +I+ SALS Sbjct: 486 LLYELGAVGADN-----RLSELGRRVARLPIDPRLARMALAGAEQGSLRETLIVVSALST 540 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 QDPR+RP DK+QA+DEKHR++ D ESDF+A++NLW+ + + ++ LS N RR CR +YL+ Sbjct: 541 QDPRDRPADKRQAADEKHRQWQDPESDFMAWLNLWHGVEQARETLSGNQLRRWCRDNYLS 600 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNS--------------EPAEYREIHIALLTGLLSH 633 YLR+REW D + QL+Q+ +++G+ +S + +H ALL+GLLSH Sbjct: 601 YLRLREWHDTFRQLKQLTRDMGLEPSSAVLPPKEDDAASARPRVDGERLHKALLSGLLSH 660 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 +G + +EY GA N +F I PGSGL KK PKWVM ELVETSRL+ R ARI P WVE Sbjct: 661 LGTLQ-ENREYLGAHNRKFMIHPGSGLAKKTPKWVMAGELVETSRLYARDVARIQPAWVE 719 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 P+A HL+KR+YSEPHWE +G V+A E+VT++GLPIV R+++Y+++ P RELFIR A Sbjct: 720 PMASHLVKRSYSEPHWEMKRGQVVAFEQVTLFGLPIVTGRRIDYAKVAPEEARELFIRRA 779 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 LVEG+++T+ AFF+ N L +VEELE + R+RDILVD+ETLF FYD R+ DV AR F Sbjct: 780 LVEGEYRTQAAFFQHNRALIDDVEELEDRVRKRDILVDEETLFAFYDARLPADVAGARSF 839 Query: 814 DSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADG 873 + W K+ RE P++L E++ L+ AE++++ YP+ ++ L Y F PG DG Sbjct: 840 ERWRKQAEREAPEVLKLERATLMARDAEEVTQQAYPDELVHNGVRYPLDYHFAPGESDDG 899 Query: 874 VTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK 933 VT+ +P +L+Q+ E EW +PGL RE IAL+K+LPK +RR VP P++ +A L + Sbjct: 900 VTLTVPAAMLSQLPEGRLEWLVPGLLREKCIALLKTLPKAIRRQVVPIPDWVDAALATLV 959 Query: 934 PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 P E PL ++L LRR TGV + +DW DQ+ HL + RVV + L EGR L LK Sbjct: 960 PDERPLTEALGEFLRRRTGVRLSADDWRTDQLEPHLIMNLRVVAHDGEVLGEGRDLGALK 1019 Query: 994 DALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAI 1053 + A+A G L +PES ++ +V+A+PALVD DS+AI Sbjct: 1020 QRFDEAASQGARALAASGPTAEALAELPEQAIPESRSTQQAGIRVEAYPALVDRGDSLAI 1079 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCI 1113 + FD+P + A +G++R +L +P ++YL +L + L F G +L+DD + Sbjct: 1080 ESFDHPDKAHAAHRHGVKRAAMLRLPEQVRYLSRELKGLDRCALLFAKVGSKTQLVDDLV 1139 Query: 1114 SCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGR 1173 +++ + + A E R+EL + +++ L + K LKG Sbjct: 1140 EAVFLQVVAVD-PLPRDRQSLEARIEATRSELVAHAEERVATLQKALEGHLEVTKALKGN 1198 Query: 1174 VDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQ 1233 +++++AL SD+KAQM LVY GFV+ + L RY+QA RLEK + RD+ Sbjct: 1199 LNLSLALVYSDLKAQMARLVYPGFVSDAE-EWLEQYPRYMQAALIRLEKAPRERSRDQMA 1257 Query: 1234 MLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 M +V ++ + + R D E W +EELRVS FAQQLGT P+S KR+ + Sbjct: 1258 MQQVHAFEERLRARLEADQREGRRDPRFVEFGWWLEELRVSLFAQQLGTLAPVSAKRLER 1317 Query: 1294 AMEQISG 1300 +++G Sbjct: 1318 RWTELTG 1324 >UniRef50_A9WQ04 ATP-dependent helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WQ04_RENSM Length = 1296 Score = 1480 bits (3833), Expect = 0.0, Method: Composition-based stats. Identities = 703/1297 (54%), Positives = 890/1297 (68%), Gaps = 78/1297 (6%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL------ 124 ITYP LPVS ++++++ AIRDHQVVI+AGETGSGKTTQ+PK+C+ELG G Sbjct: 5 ITYPPELPVSARREELMAAIRDHQVVIIAGETGSGKTTQIPKMCLELGLTEPGKDGKPRL 64 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRRLAARTVA RIA EL + G +G++VRF+ VS T VK+MTDGILLAEIQ+ Sbjct: 65 IGHTQPRRLAARTVAERIAAELDVKIGEEVGFQVRFTGEVSRQTKVKVMTDGILLAEIQR 124 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-- 242 D+LL +Y T+IIDEAHERSLNIDF+LGYL+++LP+RPDLKIIITSATIDPERF++HF Sbjct: 125 DKLLHRYSTLIIDEAHERSLNIDFILGYLRQILPKRPDLKIIITSATIDPERFAQHFAID 184 Query: 243 --NAPIIEVSGRTYPVEVRYRPIVEEADDT---------ERDQLQAIFDAVDELSQESHG 291 API EVSGRTYPVE+RYRP+ + ++D L A+ DAV+ELS E+ G Sbjct: 185 NVPAPIEEVSGRTYPVEIRYRPLDGSDGEPAEQSEDDSEDKDPLDAVCDAVEELSGEAPG 244 Query: 292 DILIFMSGEREIRDTADALNKLN-----LRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 D+LIF SGEREIRD A+AL LR EILPL+ARLS +EQ+ VF S RRIVL Sbjct: 245 DVLIFFSGEREIRDAAEALRGRFAHHPRLREAEILPLFARLSLAEQHAVFSPGSRRRIVL 304 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATNVAETSLTVPGIKYVID GTARISRYS+RTKVQRLPIE ISQASANQR GRCGRVS+G Sbjct: 305 ATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERISQASANQRAGRCGRVSDG 364 Query: 407 ICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEAPDKRNI 462 ICIRLYSE DF R EFTDPEILRTNLA+VILQM+A+G+ D+A+FPFVE PD + I Sbjct: 365 ICIRLYSEADFQGRREFTDPEILRTNLAAVILQMSAIGVAREPKDVASFPFVEPPDAKAI 424 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 DGV LL ELGA+ D ++P+GRQL+QLPVDPRL RM++E+ K GC RE MI+ Sbjct: 425 ADGVALLSELGALQPDGG-----ISPVGRQLAQLPVDPRLGRMIVESGKRGCAREVMILA 479 Query: 523 SALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCR 582 +AL+IQDPRERP +K+Q +DEKH+RF D+ SDF F+NLW YL E+QK LSS AFRRLC+ Sbjct: 480 AALTIQDPRERPTEKRQIADEKHKRFSDENSDFTGFLNLWRYLQEKQKELSSTAFRRLCK 539 Query: 583 TDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR----EIHIALLTGLLSHIGMKD 638 +++NYLRVREWQD++ QLRQ+ K L I +++ + +H +LL GLLSH+G+ D Sbjct: 540 AEFINYLRVREWQDLFAQLRQLAKPLNITLSTGEVDPVGLHIPVHQSLLAGLLSHLGLFD 599 Query: 639 ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 K+EY GAR +RF+IFPGS LFKK P WVM AELVETSRLW R+ ARIDP W E VA Sbjct: 600 DRKREYAGARGSRFAIFPGSALFKKNPDWVMSAELVETSRLWARVNARIDPIWAEEVAAG 659 Query: 699 LIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD 758 L+KR+YSEPHW + G+VMA EKVT++G+PIVA R++NY +ID L RELFIRHALVEGD Sbjct: 660 LVKRSYSEPHWSKRNGSVMAYEKVTLFGVPIVAQRRINYGRIDAPLSRELFIRHALVEGD 719 Query: 759 WQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWK 818 W+T H FF N + AEVEELE + RRRD+ VDDETLFEFYD R+ +V+S RHFD WWK Sbjct: 720 WRTHHKFFHRNQSVLAEVEELETRMRRRDLRVDDETLFEFYDARVGAEVVSERHFDKWWK 779 Query: 819 KVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA--------- 869 E P LL+F+ +++ E A+ + + YP G +L LSY+F+P + Sbjct: 780 SARHENPTLLDFDPGVVMTEDAD-LDETAYPKSIRHGEFELALSYEFQPSSQYLAAGTPV 838 Query: 870 -DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA- 927 D+DGVTV +P+ LNQ+E++ F+WQIPGLR ELV ALIKSLPKPVR+NFVPAP+ Sbjct: 839 NDSDGVTVTVPVLFLNQLEDAPFKWQIPGLRAELVTALIKSLPKPVRKNFVPAPDVGRQA 898 Query: 928 ---FLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLK 984 + P + L SLE LRR+ G + W+WD VP HL++TF+VVD K L Sbjct: 899 ATALAADLDPSQDDLESSLELALRRLRGHVIPPGSWNWDAVPVHLRMTFQVVDSAGKILD 958 Query: 985 EGRSLQDLKDALKGKVQETLS------------------------AVADDGIEQSGLHIW 1020 +G+ L L+++L G + ++ A E SGL W Sbjct: 959 KGKDLAALQESLAGATRRAIAESLGAMPKTAAPKNPAQRGPSAAVAAEPSIRELSGLTSW 1018 Query: 1021 SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS 1080 S G + S + + V +PAL DE + +++F N E + G+ RLL L IPS Sbjct: 1019 SLGTIERSVSRLVNGHSVTGYPALTDEGTTAGLRVFQNEDEALVSHRAGVIRLLALRIPS 1078 Query: 1081 PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK 1140 P +Y+ E L N KL NP+GKV +LI DC +DKLI +TE F AL+E Sbjct: 1079 PDRYVLEHLSNSEKLTFSQNPHGKVTDLIADCTLAAIDKLIPEE--LPFTEAEFDALYEA 1136 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 RAEL DTV + VE+IL + I +LKG + + L+D++AQ+ GLVY GF++ Sbjct: 1137 SRAELIDTVFAVVAVVERILASARRIETQLKGSTSLALISALNDVRAQLDGLVYAGFISR 1196 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 G+ +L R+L AIEKRLEKL + RD M V+ ++ + + L R + Sbjct: 1197 TGYAQLSQLPRFLVAIEKRLEKLPTNVQRDGLNMAAVQRLEDEYDDAVAALAAGRSVPQS 1256 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 ++++RWM+EELRVS FA +LGT Y +S+KRI QAM Q Sbjct: 1257 LRKVRWMLEELRVSLFAVELGTAYSVSEKRIRQAMSQ 1293 >UniRef50_A6C1G8 ATP-dependent helicase HrpA n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1G8_9PLAN Length = 1334 Score = 1480 bits (3831), Expect = 0.0, Method: Composition-based stats. Identities = 565/1317 (42%), Positives = 799/1317 (60%), Gaps = 33/1317 (2%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 + L + + M D+ RFS+RL +++ K+ Q + +E++++ + R Sbjct: 23 ALSELPKLISQAMAGDQFRFSQRLRSIRQAQKSKKPFDKNLQRLREELEKSLARRDERLK 82 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 P+IT+ +LP+ Q+ I + I ++QVVIV GETGSGK+TQLPK+ + +GRGI G+IG Sbjct: 83 RCPKITFDQSLPIHQELATIQKTIEENQVVIVCGETGSGKSTQLPKLLLSMGRGISGIIG 142 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AAR+VA RI+EEL E G G+K+RF+D + NT +KLMTDGILLAE Q D Sbjct: 143 HTQPRRIAARSVAARISEELGREQGTACGFKIRFTDTTNPNTYIKLMTDGILLAETQTDS 202 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF----N 242 L QYDTIIIDEAHERSLNIDFLLG+LK LLP+R DL++IITSATID ERFS HF Sbjct: 203 FLNQYDTIIIDEAHERSLNIDFLLGFLKRLLPKRRDLRVIITSATIDAERFSEHFAGSEG 262 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTE-------------RDQLQAIFDAVDELSQES 289 API+ VSGRTYPVE+RYRP +E E RD+ + DAV+EL+ Sbjct: 263 PAPILNVSGRTYPVEIRYRPFDDEPAGKEAGKETGNKSQNSSRDEQSQLADAVNELAAID 322 Query: 290 HGDILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQSHSGRR 343 GDILIF++ E +IR+TA L ++ R TEI+PLY RLS +EQN+VF+ S RR Sbjct: 323 DGDILIFVATEWDIRETAKLLRGRSIIGDDGGRQTEIVPLYGRLSTAEQNKVFRPSSYRR 382 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 IV+ATNVAE+S+TVPGI+YVID G ARISRYS R++VQRLPIE +SQASANQR GRCGRV Sbjct: 383 IVIATNVAESSITVPGIRYVIDTGLARISRYSSRSQVQRLPIEAVSQASANQRAGRCGRV 442 Query: 404 SEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 + GICIRLYSE D+ SR EFT PEILRTNLASVILQ + LG I FPF++ P I+ Sbjct: 443 APGICIRLYSEADYKSRDEFTSPEILRTNLASVILQTLNMRLGAIEEFPFIDPPKPTAIR 502 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 DG L ELGAI +LT +GR++S+LPVDPR+ARM+L A C+ E +II + Sbjct: 503 DGYSTLFELGAIDEQN-----RLTDIGRKISRLPVDPRIARMILAAHDENCLHEILIIAA 557 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 AL +QDPRERP++KQQA+DE H +F D +SDFL+F+ LW++ + ++ S + RR C Sbjct: 558 ALELQDPRERPIEKQQAADEAHEQFRDPDSDFLSFLKLWDFYHKLKEEQSHSKLRRACVQ 617 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQE 643 ++L+Y R+REW DI+ QLRQ+V+E GI + + IH ALL GLLS+I M+ D E Sbjct: 618 NFLSYNRLREWADIFRQLRQLVEESGIKPHPRKDDSAAIHRALLPGLLSNIAMRS-DSHE 676 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 YTGA ++ ++PGSG+F+K PKW++ AEL+ETS+ + R A+I P W+EP A HL+K++ Sbjct: 677 YTGAGQQKYFLWPGSGIFEKKPKWIISAELIETSKRYARTVAKISPNWIEPAAPHLVKKS 736 Query: 704 YSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRH 763 +S+P W + +A EKVT++GL IV R V+Y +IDP R L +++ LVEGD Sbjct: 737 WSDPRWNGEAASAVAAEKVTLFGLTIVPRRSVHYGKIDPEHSRTLLLQYGLVEGDININV 796 Query: 764 AFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRE 823 F N K ++E+ + +SRR D++ E F +YDQRI DV WWK S + Sbjct: 797 DFLAHNQKFIEDLEQQQARSRRYDLIPSQEQQFAYYDQRIPEDVYDGVSLKKWWKVASLK 856 Query: 824 TPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLL 883 TP LLN +E+I + ++P+ + G ++ L Y EPGA+ DGVTV IP L Sbjct: 857 TPTLLNMRLEDFFDTQSEEIDEGEFPDAINMGKMQFPLEYHLEPGAEEDGVTVSIPQESL 916 Query: 884 NQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSL 943 NQ+ W +PGL E V A+IK+LPK VRR VPAP A+ + +++ + +++ Sbjct: 917 NQLSPQRLGWLVPGLLEEKVAAMIKALPKAVRRMLVPAPETAKQVVSKLEFGKGSFEETV 976 Query: 944 ERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQET 1003 L +++G + + + ++P HL++ RV+D + R+L L+ K + Sbjct: 977 AEMLSQISGERITADQFEIQRLPQHLQMNIRVLDQGGDAIAVNRNLTQLRQEYGSKAASS 1036 Query: 1004 LSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQK 1063 +A++DD QSGL W+FG P + + + +P+LVDE+ SVA+ L D P Sbjct: 1037 FTALSDDHWSQSGLTDWTFGDFPAEVQIQHDQLSLTGFPSLVDEQTSVALCLRDAPERAA 1096 Query: 1064 QAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDA 1123 GLRRL +L+ +K E LP+ ++ LY G + L + + ++ + Sbjct: 1097 YETRFGLRRLFILSEHKRLKAQVEHLPDLNRISLYATAIGGIN-LREQLVELLAERTLFG 1155 Query: 1124 NGG-PVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGL 1182 E + L ++ R ++ D+A + + + L + L Sbjct: 1156 KKEQLPRNEAQYRQLVKEWRNQIPVAAQDLASLLPGLFEQYHKMKVTLDKTKVPAWSEPL 1215 Query: 1183 SDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV-DPHRDRAQMLKVENVQ 1241 D++AQ+ ++ F+ + L RYLQ +E RL KL +D A + + Sbjct: 1216 HDMRAQLNAMINNRFLVSTPYPWLQQFSRYLQGMEMRLSKLGGTGLKKDIANIRSISRYF 1275 Query: 1242 QAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + + Q + D + + RWM+EELRVS FAQ+LGT +S K + Q + Sbjct: 1276 ELYSQRARQHHEREIVDPQLIKFRWMLEELRVSLFAQKLGTALKVSPKILDQQWAAV 1332 >UniRef50_B0RGP0 ATP-dependent helicase n=3 Tax=Actinobacteria (class) RepID=B0RGP0_CLAMS Length = 1272 Score = 1479 bits (3830), Expect = 0.0, Method: Composition-based stats. Identities = 662/1273 (52%), Positives = 886/1273 (69%), Gaps = 49/1273 (3%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 I YP LPVS+ + +I +AIRD+QVVIVAG TGSGKTTQLPKIC+ELGR IGHT Sbjct: 3 SSIVYPPELPVSRMRDEIADAIRDNQVVIVAGATGSGKTTQLPKICLELGRE---SIGHT 59 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRRLAART++ RIAEEL E G +GY+VRF+D VS +T +KLMTDGILL E+Q+DRLL Sbjct: 60 QPRRLAARTISERIAEELGGEVGQLVGYQVRFTDKVSADTRIKLMTDGILLNELQRDRLL 119 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 +YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATIDP+ FS+HF +API+E Sbjct: 120 KKYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIITSATIDPQSFSKHFGDAPIVE 179 Query: 249 VSGRTYPVEVRYRPIVEEAD----------------DTERDQLQAIFDAVDELSQESHGD 292 VSGRTYPVE+RYRP+V EA +RD L+ I A+DEL+ ES GD Sbjct: 180 VSGRTYPVEIRYRPLVAEAAVAGEDDDLADAPLERPADDRDFLEGINAALDELAAESSGD 239 Query: 293 ILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS----GRRIVLAT 348 +L+F+SGE EIRD DA+ NL HTE+LPLY RLS+++Q+RVFQ + RRIVLAT Sbjct: 240 VLVFLSGENEIRDAEDAIRSRNLPHTEVLPLYGRLSSADQHRVFQPSTQAGVRRRIVLAT 299 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 NVAETSLTVPGIKYVID GTARISRYS R+KVQRLPIE ISQASANQR GR GR S+GI Sbjct: 300 NVAETSLTVPGIKYVIDAGTARISRYSVRSKVQRLPIEAISQASANQRSGRSGRTSDGIA 359 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 IRLYSE+DFL RPEFT+PEILRTNLA+VILQM +LGLGDIAAFPF++ PD R I+DGV L Sbjct: 360 IRLYSEEDFLRRPEFTEPEILRTNLAAVILQMVSLGLGDIAAFPFLQPPDSRGIKDGVDL 419 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L ELGA+ LT +GR LS+LP+DPR ARMV+E++KHG RE MII + L+IQ Sbjct: 420 LTELGAV-IRSPDGTPALTQVGRDLSRLPIDPRFARMVVESRKHGVSREVMIIVAGLTIQ 478 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 D RERP++K+ +D++H RF D SDF+ +NLWN+L E++ LSS+AFRR+C+ ++LNY Sbjct: 479 DVRERPLEKRPQADQQHARFVDPSSDFITLLNLWNHLEEKEAELSSSAFRRMCKAEFLNY 538 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR 648 +RVREW+D++ QLRQ+ + L + +N A+ IH +LL GLLSHIG+KDA K++Y GAR Sbjct: 539 VRVREWKDVFRQLRQLARPLDLAMNEPKADPDGIHKSLLAGLLSHIGLKDAQKKDYVGAR 598 Query: 649 NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPH 708 +RF +FPGS L KK P +M AELVETSRL+ R A IDP W EP+A L+KRT+SEPH Sbjct: 599 QSRFVVFPGSALAKKQPDAIMSAELVETSRLFARTNAAIDPAWAEPIAGGLVKRTHSEPH 658 Query: 709 WERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRE 768 WE+ QGA +A E+VT+YG+PIV R+V +S+IDPA RELFIRHALVEGDW+++ AF R Sbjct: 659 WEKKQGATVAWERVTLYGVPIVLKRRVQFSRIDPAYARELFIRHALVEGDWESQQAFDRA 718 Query: 769 NLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLL 828 N +LR E+ E+E ++RRRDIL DDE +FEFYD+RI DV S R F+ WWKK +ETP+LL Sbjct: 719 NRRLREELAEVEERTRRRDILNDDEAVFEFYDKRIPRDVASTRAFEGWWKKQRQETPELL 778 Query: 829 NFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEE 888 L+ A + + +P W QG+ +L L+Y+FEPGA DGVTV +PL LL ++ Sbjct: 779 TMTAEELVASDAMDVDEAAFPPTWQQGDQRLSLTYRFEPGAPDDGVTVQVPLALLARLSP 838 Query: 889 SGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL----PLLDSLE 944 +GF+WQ+PG+RR+LV A+IK+LPK +R+N VPA ++A+ L + + ++ Sbjct: 839 AGFDWQVPGMRRDLVTAMIKALPKALRKNVVPAADWADRLLEGLPEPDPQHPVAFTTTIA 898 Query: 945 RELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETL 1004 + R V V +D+ D++P HL++ FRVVD++ +++ GR L +L+ L + ++++ Sbjct: 899 GLIMRKAHVRVADDDFDLDRIPAHLRMAFRVVDERGREVAAGRDLTELQARLSSRARDSV 958 Query: 1005 SAV--------------ADDGIEQSGLHIWSFGQLPESYEQKRGN-----YKVKAWPALV 1045 + A G+E++GL W +LP + +G + ++A+PALV Sbjct: 959 ARATARPVERVAGAKGPATRGMERTGLTTWDLDELPRFVDTAQGGTGDSRHVIRAYPALV 1018 Query: 1046 DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV 1105 DE +VAI+L +Q +AM G+RRLL+L I +P Y+ + L ++ KL L +PY V Sbjct: 1019 DEGSTVAIRLMATAEDQARAMPGGVRRLLVLAIANPSAYVKQHLTSQEKLMLATSPYPNV 1078 Query: 1106 LELIDDCISCGVDKLID--ANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 L DDC+ +D++++ A GG ++++E F ++V + D++ D V +ILT Sbjct: 1079 QALFDDCLLACIDQVLERVAPGGAIYSKELFETARDRVSGVVMDSMFDTVALVNRILTGA 1138 Query: 1164 FNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 + + +K M + L+D + Q+ GLV+ GFV+ G RL YL + R+++L Sbjct: 1139 RDAERAIKQATSMQLIGALTDAREQLAGLVHPGFVSATGLARLQRLPAYLSGLTHRVQRL 1198 Query: 1224 AVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTP 1283 P RDRA M +V+ +++ +P A + RWM+EELR+S FAQ L T Sbjct: 1199 PDQPARDRAWMTEVQKATDLYREAGGVIPSAPHAPASLVHARWMLEELRLSLFAQHLPTA 1258 Query: 1284 YPISDKRILQAME 1296 P+S +RI + + Sbjct: 1259 EPVSLQRIRKVLA 1271 >UniRef50_B2JJC7 ATP-dependent helicase HrpA n=89 Tax=cellular organisms RepID=B2JJC7_BURP8 Length = 1462 Score = 1473 bits (3814), Expect = 0.0, Method: Composition-based stats. Identities = 598/1361 (43%), Positives = 826/1361 (60%), Gaps = 100/1361 (7%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 ++ + + + A A Q +V + P IT+P+ LPVS ++++I Sbjct: 112 RQQTRPEDRARAGNQSGADKPRNAPREPQKPARV-VEPNPIPPITFPEALPVSGRREEIA 170 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG----HTQPRRLAARTVANRIA 143 AI HQVVIV+GETGSGKTTQLPKIC+ LGRG+ G HTQPRR+AA RIA Sbjct: 171 RAIEGHQVVIVSGETGSGKTTQLPKICLALGRGLGAGGGGLIGHTQPRRIAASATGRRIA 230 Query: 144 EELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERS 203 EEL T G +GYKVRF+D++S VKLMTDGILLAE Q D LL YDT+IIDEAHERS Sbjct: 231 EELGTPFGEVVGYKVRFTDNLSPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERS 290 Query: 204 LNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----NAPIIEVSGRTYPVEVR 259 LNIDFLLGYLKE+LP+RPDLK+I+TSATID +RF+RHF AP+IEVSGR YPVEVR Sbjct: 291 LNIDFLLGYLKEILPKRPDLKLIVTSATIDADRFARHFGSEEKPAPVIEVSGRLYPVEVR 350 Query: 260 YRP----------------------IVEEADDTERDQLQAIFDAVDELSQESHGDILIFM 297 YRP + +T+RD + AI +A DEL +E GD+L+F+ Sbjct: 351 YRPVADDSPAVKAAEGNSGREHRPDRPKTQRETDRDLMDAIVEAADELCREGPGDVLVFL 410 Query: 298 SGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTV 357 GEREIRD A+AL K + HTEILPL+ARLS +EQ RVF+ + RRIVLATNVAETSLTV Sbjct: 411 PGEREIRDAAEALRKHHPPHTEILPLFARLSAAEQERVFRPSNARRIVLATNVAETSLTV 470 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI+YVID G AR+ RYSYR KV++L +E ISQA+ANQR GRCGRV++GICIRLY E DF Sbjct: 471 PGIRYVIDTGLARVKRYSYRNKVEQLQVEAISQAAANQRAGRCGRVADGICIRLYEEADF 530 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 +R FTDPEILR++LA+VIL+M +L L I FPF+E P R I DG +LL ELGA+ Sbjct: 531 QARVRFTDPEILRSSLAAVILRMKSLHLTAIETFPFIEPPPGRAIADGYQLLNELGAVDD 590 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 D LTPLGR+L++LP+DPR+ RM+L A+ +RE +II SALS+QDPR+RP+D Sbjct: 591 DN-----ALTPLGRELARLPLDPRVGRMILAARDQLALREVLIIASALSVQDPRDRPIDA 645 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLRVREWQD 596 Q+ +D+ HR+F D+ S+FL ++ +W + E S+ CR ++L++LR+REW+D Sbjct: 646 QEQADQAHRKFADERSEFLQWLKIWTWFEEAVAHKKSNRQLTDACRQNFLSHLRLREWRD 705 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 +++QL VV+E G +N A + +IH+ALLTGLL +IG+K D+ Y GAR +F ++P Sbjct: 706 VHSQLLTVVREHGWRLNESEATFEQIHLALLTGLLGNIGLKADDEPYYLGARGIKFYLWP 765 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GS L KK KWVM AEL+ETSRL+ R A+I+PEWVE V HL+K++ SEPHWE+ V Sbjct: 766 GSALVKKAGKWVMAAELIETSRLYARCIAKIEPEWVERVGAHLLKKSLSEPHWEKRAAQV 825 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 A E+ +YGLP+ R+V++ + DPA RELFIR ALVEG++ T+ AFF N KL A++ Sbjct: 826 TAFERAMLYGLPVYHRRRVSFGKQDPARARELFIRGALVEGEFDTKLAFFAHNRKLLADI 885 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRET------PDLLNF 830 E+LEHKSRR+D+LVDDE ++ FYDQ I + + + F+ W++ +++ LL Sbjct: 886 EQLEHKSRRQDVLVDDELIYAFYDQAIPNGIHTGAAFERWYRDEVKKSGQQEDKLRLLYL 945 Query: 831 EKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESG 890 + L++ A ++ +P + + L+Y FEPG+ DGVT+ +PL LNQV+ Sbjct: 946 SRDDLMRHEAAGVTTDLFPKRMTMAGVDMALTYHFEPGSPRDGVTLAVPLYALNQVDTRR 1005 Query: 891 FEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV---KPLELPLLDSLEREL 947 EW +PG+ RE L+KSLP+ +RR+ VP P YA F+ R LLD++ ++ Sbjct: 1006 VEWLVPGMLREKTQLLLKSLPQKLRRHVVPLPEYAAGFVERHSGPPFGAGGLLDTVIADV 1065 Query: 948 RRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV 1007 R T V + D+ + + HL + F+V+D+ ++L GR+L L+ L G+ Q+ + Sbjct: 1066 REQTQVATKQSDYKLETLAPHLFMNFKVIDEHGRQLAMGRNLAQLRAELGGQAQQQFQKI 1125 Query: 1008 ADDGIEQ-------------------------------------------------SGLH 1018 A L Sbjct: 1126 ATSAAGAALANVGSGGDASARAAASGAAAGAGRGASAAPRTPTAGEAAAAPATALYENLT 1185 Query: 1019 IWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 W+FG+LPE E +RG + +PALVD +++FD+P E + GLRRL L + Sbjct: 1186 TWNFGKLPELLEIRRGGQTLFGYPALVDRGTHCDVEVFDSPDEAARIHRAGLRRLFALQL 1245 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALH 1138 PIKYL + LP ++ + F P G EL D I +D+ + F A Sbjct: 1246 REPIKYLEKNLPGLREMAMQFMPRGTQEELRDQLIDTALDRACLQE-PLPDDDASFHARK 1304 Query: 1139 EKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFV 1198 ++ R+ L +IA+ V QIL + K+L A +D+ AQ+ L+ + FV Sbjct: 1305 DEGRSRLTLLAQEIARLVGQILGEYSAVLKKLAQAKP--FAAAYADMHAQLDALIGKRFV 1362 Query: 1199 TGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRED 1258 + +L RYL+ I R++KL DP RD Q +++ + Q +Q+ + + D Sbjct: 1363 VDTPYAQLSHFPRYLKGIALRIDKLKADPARDARQFAELQPLAQHYQRALGQ--RGGVPD 1420 Query: 1259 EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + E RW++EELRVS FAQ+L TP P+S KR+ + E + Sbjct: 1421 VRLAEFRWLLEELRVSLFAQELRTPMPVSVKRLYKVWESMQ 1461 >UniRef50_Q3SHC5 ATP-dependent helicase HrpA n=3 Tax=Betaproteobacteria RepID=Q3SHC5_THIDA Length = 1275 Score = 1471 bits (3810), Expect = 0.0, Method: Composition-based stats. Identities = 567/1258 (45%), Positives = 774/1258 (61%), Gaps = 44/1258 (3%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 +LPV+ ++ DIL A+ H+V+I+ GETGSGKTTQ+PK+C+E G LIG TQPRR+A Sbjct: 23 PDLPVAARRDDILAALERHRVLILCGETGSGKTTQIPKMCLEAGIPPGKLIGCTQPRRIA 82 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 AR+VA RIA+EL +E GG +GYKVRFSD V +T +K+MTDGILLAE Q D LL +YDTI Sbjct: 83 ARSVAARIAQELGSELGGLVGYKVRFSDKVRPDTAIKVMTDGILLAESQGDPLLSRYDTI 142 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHERSLNIDFLLGYLK LL +R DL++++TSATID ERFS+HF++AP+IEVSGR Y Sbjct: 143 ILDEAHERSLNIDFLLGYLKTLLDKRADLRVLVTSATIDAERFSKHFDDAPVIEVSGRLY 202 Query: 255 PVEVRYRP-----------------IVEEADDTERDQLQAIFDAVDELSQESHGDILIFM 297 PVE+R+RP DQ+ AI DA DEL++ GDIL+F+ Sbjct: 203 PVEIRWRPIARDDEAGAPGNKREAEKPGRTYKDGPDQIAAILDATDELARLGPGDILVFL 262 Query: 298 SGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLT 356 GEREIRDTA+AL K + TEILPL++RLS +EQ+ +F+ S RRIVLATNVAETSLT Sbjct: 263 PGEREIRDTAEALRKHHPPGTEILPLFSRLSVAEQDAIFKPTSALRRIVLATNVAETSLT 322 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 VPGI+YVIDPGTAR+ RYS R KV++L IE +SQASANQR GRCGRV++G+CIRLY E D Sbjct: 323 VPGIRYVIDPGTARVKRYSARNKVEQLLIEKVSQASANQRAGRCGRVADGVCIRLYDEAD 382 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F +RP FTDPE+LR++LA VIL+M +LGLGD+ FPF++ P R + DG +LL EL A+ Sbjct: 383 FSNRPRFTDPELLRSSLAGVILRMKSLGLGDVVGFPFIDPPSSRLVTDGYQLLGELHALD 442 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 Q LT +GRQL++LP+DPR+ARM+L A++ CVRE +II SALS+QDPR+RPM+ Sbjct: 443 EQGQ-----LTKIGRQLAKLPLDPRIARMLLAAEQQRCVREILIIASALSVQDPRDRPME 497 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALSSNAFRRLCRTDYLNYLRVREWQ 595 + QA+DEKH+ F D+ SDF+ ++ LW + EQ Q ++ + L + +L+ R+REW+ Sbjct: 498 RAQAADEKHKLFQDERSDFMGWLRLWRWYEEQVQHKKTNRQLQTLLQDHFLSPRRMREWR 557 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADK-------------Q 642 DI+ QL V ELG+ N + A Y IH ALL+GLL +IG K D Sbjct: 558 DIHGQLHAQVAELGLRENEKDAGYDAIHQALLSGLLGNIGFKSDDGRAKTGAGRPKPGEG 617 Query: 643 EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 Y GAR + SI PGS L KK PKW+M AEL +T RL R A + PEW+E +HL+ R Sbjct: 618 NYLGARGIKLSIHPGSALAKKGPKWIMAAELTDTGRLLARTVAEVRPEWIEGAGRHLLTR 677 Query: 703 TYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTR 762 Y EPHWE+ V+A E+V++YG+ +V RK++Y IDP L RELFIR ALV GD+ TR Sbjct: 678 MYIEPHWEKDGARVVAWERVSLYGITLVPRRKIHYGPIDPELARELFIRGALVAGDYDTR 737 Query: 763 HAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSR 822 +F N L E+E+LEHK+R+ + +D+ ++ +D R+ + + F+ W + Sbjct: 738 APWFAHNRALIQEIEDLEHKARKSGVWLDEARIYGIFDARVPAGIHNGVAFEKWRAEAEA 797 Query: 823 ETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPL 882 P L + ++ EG +P + L Y+FEPG DGVT+ +PL L Sbjct: 798 ADPRTLFLRREDILGEGLGA-DHTLFPESMQVDGVMCALKYRFEPGHPLDGVTLRVPLYL 856 Query: 883 LNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDS 942 LN++E +W +PGL RE + AL+K LPK RR +P P+ AFL +P E L ++ Sbjct: 857 LNRIEAPQIDWLVPGLIREKLTALLKFLPKDKRRPLIPLPDTVTAFLSSAQPGERVLTEA 916 Query: 943 LERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQE 1002 L +R+ TG + +DW + +P HLK+ VVDD ++L GR L L+ L G + Sbjct: 917 LAAFVRKKTGADIHPDDWRGE-LPAHLKMNLCVVDDSGQELASGRDLGALRQQLGGAARI 975 Query: 1003 TL-SAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLE 1061 T AD E++GL W FG LPE + KRG ++ +PALVD SV ++L D Sbjct: 976 TYGGGAADSEFERTGLLEWDFGDLPEQVKFKRGGRELTGYPALVDTGTSVDLRLIDTAEA 1035 Query: 1062 QKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLI 1121 + G+ RLL L + + K L + L + L L F G L + + + Sbjct: 1036 ARGETRRGVIRLLRLALAAQFKQLDKDLGRETALALKFRTLGSPETLRAHLLDAIAARAL 1095 Query: 1122 DANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALG 1181 + + FA E+ + + + + V +IL + RL + Sbjct: 1096 LGDDETPRDAKAFARQKERAKPRVAVVKQALLRDVAEILDLHAQVAARLAAK--PQFTAV 1153 Query: 1182 LSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQ 1241 + D A + LV F+T + RL D RYL+ I KRLEKL RD M V +Q Sbjct: 1154 MRDETAHLAALVPSDFITATPWPRLKDLPRYLRGILKRLEKLPAAEQRDARAMAGVLTLQ 1213 Query: 1242 QAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 +Q ++ + + RW +EELRVS FAQ+L TPYP+S KR+ + + ++ Sbjct: 1214 NKYQARRAQVR--GELPAALDDFRWQLEELRVSLFAQELKTPYPVSVKRLDKVWDTLA 1269 >UniRef50_B9ZMZ4 ATP-dependent helicase HrpA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMZ4_9GAMM Length = 1307 Score = 1465 bits (3793), Expect = 0.0, Method: Composition-based stats. Identities = 585/1304 (44%), Positives = 816/1304 (62%), Gaps = 24/1304 (1%) Query: 8 TFTALQQRLDSLML-RDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 AL + +++L R+R L ++ K + + + + +A R+ Sbjct: 7 DLDALARTVEALPQGRERRELGELLRRARQRHKRGQPCDRLVSTLTERLARAEQGGAERQ 66 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 RP+ TY +LP+ +++ I+ AIR+H V+++ GETGSGKTTQLPK+C+E GRG GLI Sbjct: 67 HLRPQPTYAGDLPIHAERERIVAAIREHPVLVLCGETGSGKTTQLPKLCLEAGRGETGLI 126 Query: 126 GHTQPRRLAARTVANRIAEELKTEPG----GCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 GHTQPRR+AAR+VA+RIAEEL T G +G+KVRFSD N VKLMTDG+LLAE Sbjct: 127 GHTQPRRIAARSVASRIAEELGTTLGGDRNSTVGFKVRFSDQTGPNNWVKLMTDGMLLAE 186 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 + D L YDT+I+DEAHERSLNIDFL+G LK L +RP+L+IIITSAT+DPER S F Sbjct: 187 LAHDPELRAYDTLIVDEAHERSLNIDFLMGVLKRLSKKRPELRIIITSATLDPERLSAFF 246 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDT-------ERDQLQAIFDAVDELSQESHGDIL 294 ++API+ V+GRTYPVE+RYRPI E D ERD I DAV E + GDIL Sbjct: 247 DDAPILTVAGRTYPVELRYRPIEPEDADEDNSTERGERDLFDGIRDAVAECERAGPGDIL 306 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS 354 +F+ GEREIRD AL TE+L LYARLS EQ RVFQSHSGRRIVLATNVAET+ Sbjct: 307 VFLPGEREIRDAHKALRGQVRADTEVLALYARLSAREQARVFQSHSGRRIVLATNVAETA 366 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LTVPGI++VID G ARISRYS+R++VQRL +EPISQA+ +QR GRCGR+ GICIRL+SE Sbjct: 367 LTVPGIRFVIDSGLARISRYSWRSRVQRLSLEPISQAACDQRAGRCGRLGPGICIRLFSE 426 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 DD+ RP FTDPEI R+NLASVILQM AL LG FPFV+ PD R ++DG RLLEELGA Sbjct: 427 DDYNLRPPFTDPEIQRSNLASVILQMAALKLGQPRQFPFVDPPDPRLVKDGYRLLEELGA 486 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + + + TP GRQL+++P+DPR M+L HGCV E I + LS+QDPRERP Sbjct: 487 VD-----TRGRTTPRGRQLARMPIDPRHGAMLLAGADHGCVTETATIAAFLSLQDPRERP 541 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 + QA+D+ HR F + SDF+ + LW ++ L SNA +R CR +LN+LR+REW Sbjct: 542 AEATQAADQAHREFQVEGSDFMGMLRLWEAWHTAREDLGSNALKRWCREHFLNFLRMREW 601 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 Q++ QL ++ +E+ + N +PA+ +H ALLTGL+S IG K ++ +Y GARN RF I Sbjct: 602 QELRVQLLRLAREMDLKPNHQPADAEPVHRALLTGLVSQIGQKT-ERGDYLGARNRRFQI 660 Query: 655 FPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 PGS L KK P WVM AE+ ET+R++ R ARI+P+W+ A HL+K EPH++R G Sbjct: 661 HPGSVLAKKKPAWVMSAEIAETTRVYARDNARIEPDWILAAAPHLLKHHIFEPHFQRRSG 720 Query: 715 AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA 774 V A +++T+YGL + + V++++ DP+ R + IR LV G+ +TR + N + A Sbjct: 721 RVGAFDRITLYGLVVAPKKPVDFAKHDPSEARRILIREGLVGGELRTRSKGVQANREAVA 780 Query: 775 EVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSM 834 E+ E E + RRRD+LV+++ LF+FYD R+ D+ F++W +K ++ PD L +++ Sbjct: 781 EIAEQEARGRRRDLLVEEDRLFDFYDARLPADITDGTSFETWARKAEKQDPDALRIDRAE 840 Query: 835 LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQ 894 L+ E + + YP+ L+L L+Y+FEPG DGVTV IP+ LN V + +W Sbjct: 841 LLNEPDATLPQGAYPDHLELEGLRLPLAYRFEPGQPDDGVTVTIPIAALNAVPDWLGDWL 900 Query: 895 IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVT 954 +PGL E V L+KSLPK +RR FVPAP++A A L R++ + PL+ +L LR MTG Sbjct: 901 VPGLLEERVTGLLKSLPKGLRRQFVPAPDFAAAALARIEHRQGPLIPALAEALRAMTGTE 960 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 + + W + + HL + FR++D + ++ GR+L LK L G + A D I + Sbjct: 961 IPLDAWRPETLEPHLVMRFRILDPEGQEQASGRNLAALKRRLGGSAEAHFDASRPDEITR 1020 Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 G+ W FG LPES E +++A+P LVD D+V+++L +P + ++A GLRRL Sbjct: 1021 EGITEWDFGALPESVEFDHQGAQLRAFPILVDRGDAVSLELEPDPAKAERAHRAGLRRLF 1080 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 LL+ + L +LP + L ++ G L D + D++ A E F Sbjct: 1081 LLSARKTARDLRRQLPEIERACLNYSTLGSCEALRDQILEAAADRVFLAEPW-PRDAEAF 1139 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 E E + TV+++++ +IL ++ RL+G + ++ DI+ Q+ LV Sbjct: 1140 RERLEARLPEFSPTVMELSRLAAEILRHWHDLRTRLQGDLPLSWIEAARDIRGQLEALVP 1199 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPA 1254 F+ L + RYLQAI+KRLE+L P +DRA+ + VE + Q Q+ I + P Sbjct: 1200 ADFLLRTPHDVLPELPRYLQAIDKRLERLTQAPDKDRARRVAVEPLWQQAQELIARAP-- 1257 Query: 1255 RREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + DV R+ IEE RVS FAQ+LGT +S KR+ + + Sbjct: 1258 --DHPDVLAFRYRIEEFRVSQFAQELGTREKVSPKRLEREYADV 1299 >UniRef50_C8NU49 ATP-dependent helicase HrpA n=8 Tax=Corynebacterium RepID=C8NU49_9CORY Length = 1313 Score = 1450 bits (3755), Expect = 0.0, Method: Composition-based stats. Identities = 630/1320 (47%), Positives = 843/1320 (63%), Gaps = 36/1320 (2%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 +T AL+ RLD L + RF RRL K + ++++ KV Sbjct: 6 SSPPITRDALKARLDELPIAQVRRFDRRLKKAK-------APNALAAIHTDLEEEVAKVA 58 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 +A P+ITYP+ LPVS +++DI IRD+QVV++AGETGSGKTTQ+PK+ +ELGRG + Sbjct: 59 AIDALVPQITYPEQLPVSARREDIKNLIRDNQVVVIAGETGSGKTTQIPKMLLELGRGRR 118 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 GLIGHTQPRR+AARTVA RIA+EL + G +GY +RF D VS T VKLMTDGILLAE+ Sbjct: 119 GLIGHTQPRRIAARTVAERIADELGQDIGRSVGYAIRFDDRVSATTAVKLMTDGILLAEM 178 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF- 241 Q+DR L YDTIIIDEAHERSLNIDFLLGYLK LLP RPDLKIIITSATIDPE F+ HF Sbjct: 179 QRDRYLNAYDTIIIDEAHERSLNIDFLLGYLKRLLPYRPDLKIIITSATIDPESFAEHFA 238 Query: 242 ----NNAPIIEVSGRTYPVEVRYRPIVEE-------ADDTERDQLQAIFDAVDELSQESH 290 N APIIEVSGRTYPVE+RYRP+ E + D L + +A+ EL E Sbjct: 239 DSDGNPAPIIEVSGRTYPVEIRYRPLETEVPTKDGGTKVVDTDMLDGLIEALKELMAEGD 298 Query: 291 GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 GDIL F + ER+IRD + + K R E+ PL+ RLSN+EQ+RVF HSGRRIVLATN+ Sbjct: 299 GDILCFFASERDIRDAMELIEKQRWRGVEVTPLFGRLSNAEQHRVFSPHSGRRIVLATNI 358 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGI YV+D G ARISRYS RTKVQRLPIE ISQASANQR GR GR+++GI IR Sbjct: 359 AETSLTVPGIHYVVDTGLARISRYSTRTKVQRLPIEEISQASANQRSGRSGRIADGIAIR 418 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYSED+F +RPEFTDPEILRTNLASVILQMT L LGDIA FPFV+ PDK+ ++DG+ LL Sbjct: 419 LYSEDNFHARPEFTDPEILRTNLASVILQMTNLRLGDIAEFPFVQPPDKKAVRDGLMLLH 478 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 ELGAIT E LT +GR ++++PVDPR+ARM++EA + G + + +I ++++IQD Sbjct: 479 ELGAITDKEDQDMPVLTGIGRDIARIPVDPRMARMLVEAHRLGVLDDVTVIVASMTIQDV 538 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP++ Q +D+ H RF DK SDFLA +NLW+YL + + LS NAFR+ + +YL+Y+R Sbjct: 539 RERPLEFQAQADQAHARFKDKTSDFLAALNLWDYLKDSRNELSGNAFRKRMKKEYLHYMR 598 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAE---------YREIHIALLTGLLSHIGMKDADK 641 +REW D+ QLR+ ++LG + + + IH ALLTGLLS+IG +D Sbjct: 599 IREWFDLVRQLREAERQLGWARTATATDDHDDSRDRDPKSIHQALLTGLLSNIGARDGTS 658 Query: 642 QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 +E+ GAR RF IFPGS L KKPP++VM AELVETSRLW R A IDP WVE VA L+K Sbjct: 659 KEFKGARGTRFMIFPGSVLAKKPPEFVMAAELVETSRLWARDVAAIDPAWVEKVAGGLLK 718 Query: 702 RTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQT 761 YSEP W + A M +K +YG+ +VA R V Y ++D R +FIRHAL++G+W Sbjct: 719 HNYSEPIWSIKRAAPMVHQKSMLYGVTVVADRLVPYHRVDMDAARTMFIRHALIDGEWNA 778 Query: 762 RHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVS 821 HAF + N KL E ++E K RRR ++VD+E LF+FYD+R+ ++ + RHFD+WWKK Sbjct: 779 HHAFLKHNAKLLEEAAKVEEKVRRRGLVVDEEALFDFYDERLPDNIGTGRHFDAWWKKKK 838 Query: 822 RETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLP 881 E L+F+ S LI + S+ +P+ QG++ L Y+FEPG DGVTV +P+P Sbjct: 839 HEDAAFLDFDPSALIDDSDADTSEDSFPDKIRQGSIDYDLQYKFEPGDPFDGVTVLVPVP 898 Query: 882 LLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLD 941 LL +EE F+W +PGLR ELV LI+SLPK +R+ VPAP +A L ++ P E PL + Sbjct: 899 LLAGLEEREFDWLVPGLREELVTELIRSLPKALRKTVVPAPEFAARALDKLVPYESPLNE 958 Query: 942 SLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQ 1001 L LR + G ++ D+ + +P HLKITF +D K K SL LK G++ Sbjct: 959 QLAEVLRSLGGHGINASDFRPEALPPHLKITFASIDRKGKITDHDTSLAALKKRRAGQIT 1018 Query: 1002 ETLSAVADDGIEQSGLHIW---SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDN 1058 +++ A E + W + G +PE+ K V A+PAL D V +K+F Sbjct: 1019 SSVAK-ATKKAESDSVTKWTEDTLGDVPETVTTKIEGNNVDAFPALEATNDGVRVKVFPT 1077 Query: 1059 PLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVD 1118 Q+M +L+ I + + + LP + ++ + P+G L++D + Sbjct: 1078 KAAADQSMVTATLAMLMRQIDVSVSQMVKGLPLRQRVAVDKYPHGGAAGLVEDARVAAIR 1137 Query: 1119 KLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTM 1178 L+ A+GGPV T F AL KV+ E+ V + + N L+ Sbjct: 1138 DLMFAHGGPVRTPAEFDALLNKVKPEVAGMVRRTVVGIAGGVVEYINTAAELQN----WD 1193 Query: 1179 ALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVE 1238 + DI+ QM L+ + +T +G + L RY+ AI+ RLE++ DP RD + V+ Sbjct: 1194 GPAIDDIRQQMNFLLPKNAITVHGMENLQHLPRYMSAIQIRLEEMNRDPDRDADRQSVVD 1253 Query: 1239 NVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +V++ + +LP A R+ VK+I W I+ELRVS FAQ+LGT P+S +RI + ++++ Sbjct: 1254 DVKKYLDAKLARLPQAARKSRAVKDILWRIQELRVSLFAQRLGTAKPVSPRRIEKMVDKL 1313 >UniRef50_D1VDH3 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. EuI1c RepID=D1VDH3_9ACTO Length = 1548 Score = 1446 bits (3744), Expect = 0.0, Method: Composition-based stats. Identities = 750/1434 (52%), Positives = 966/1434 (67%), Gaps = 136/1434 (9%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++ L RL +LMLRD R +RRL V+ + +++ + E++ A + Sbjct: 115 LGAAERTELAGLSARLPALMLRDGHRLARRLDAVRHDPDAESRARTIPAITDEVETAEIR 174 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V LR A P + YP LPVSQ+K +IL AIRD+QVVIVAGETGSGKTTQ+PKIC+ELGRG Sbjct: 175 VALRRDAVPALKYPAELPVSQRKDEILAAIRDNQVVIVAGETGSGKTTQIPKICLELGRG 234 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELK-TEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 + GLIGHTQPRRLAARTVA+RIAEE GG IGY+VRF+D V D+T+VKLMTDGILL Sbjct: 235 VTGLIGHTQPRRLAARTVADRIAEETGAGSLGGIIGYQVRFTDQVGDDTLVKLMTDGILL 294 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 AE+ DRLL QYDT+IIDEAHERSLNIDF+LGYL+ +LPRRPDLK++ITSATI+ ERFSR Sbjct: 295 AELGTDRLLRQYDTLIIDEAHERSLNIDFILGYLRRILPRRPDLKVVITSATIETERFSR 354 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD---QLQAIFDAVDELSQESHGDILIF 296 HF +APIIEVSGRTYPVEVRYRP+V+ D + AI DAVDELS E GD+L+F Sbjct: 355 HFGDAPIIEVSGRTYPVEVRYRPVVDPDDPEADPDRDVITAICDAVDELSAEGLGDVLVF 414 Query: 297 MSGEREIRDTADALNKLNLRHT---EILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 +SGEREIRDTADAL + + EILPLYARLS +EQ+RVFQ H GRRIVLATNVAET Sbjct: 415 LSGEREIRDTADALARRPSKELLPREILPLYARLSTAEQHRVFQPHPGRRIVLATNVAET 474 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLTVPGIKYV+D GTAR+SRYS+R KVQRLPIEP+SQASANQR GRCGR S+GIC+RLY+ Sbjct: 475 SLTVPGIKYVVDAGTARVSRYSHRLKVQRLPIEPVSQASANQRAGRCGRTSDGICVRLYA 534 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 EDDF +RPE+TDPEILRTNLASVIL M +LGLG++A +PF++ PD R + DG+ LL ELG Sbjct: 535 EDDFDARPEYTDPEILRTNLASVILSMASLGLGEVADYPFLDPPDPRQVTDGLALLHELG 594 Query: 474 AITT------------------------------------DEQASAYKLTPLGRQLSQLP 497 A + +LTPLGR+L++LP Sbjct: 595 AFEAVRPSRASAPVAPVTPAAPAGPAAPAGSAGSVDPAERAGEGRTPRLTPLGRRLARLP 654 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 +DPRLARM+L A + G + E +IIT+AL++ D RERP D QQA+ EKH RF + SDFL Sbjct: 655 IDPRLARMILAADEQGALAEVLIITAALAVGDVRERPADAQQAATEKHARFTEPTSDFLG 714 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA 617 ++NLWNYL E+ LSSN FRRLCR +YL+YLRVREWQD+++QLRQ + LG+ NS PA Sbjct: 715 YLNLWNYLREKAAELSSNQFRRLCRAEYLHYLRVREWQDVHSQLRQAARSLGLSTNSAPA 774 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 +++H ALLTGLLSHIG+ D +K++Y GAR ARF++FPGS LFKKPP+WV+ AELVETS Sbjct: 775 SPQQVHSALLTGLLSHIGLFDPEKRDYAGARGARFAVFPGSALFKKPPRWVVAAELVETS 834 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNY 737 RLWGR+AA+I+PEWVEP+A HLI+R+YSEPHW R AV+ATEKVT+YG+PIVAAR VNY Sbjct: 835 RLWGRVAAKIEPEWVEPLAGHLIRRSYSEPHWSRRSAAVLATEKVTLYGVPIVAARSVNY 894 Query: 738 SQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFE 797 S IDPALCRELFIRHALVEGDW+T+HAFF EN +L ++ +LEH++RRRDI+VDD+T+F+ Sbjct: 895 SGIDPALCRELFIRHALVEGDWETKHAFFAENSRLLSDAADLEHRARRRDIVVDDQTIFD 954 Query: 798 FYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFW---HQ 854 FYD RI DV+S RHFD+WWKK TP LL F+ +ML+ E A+ + D+P+ W Sbjct: 955 FYDARIPVDVVSGRHFDAWWKKTRPRTPGLLTFDPAMLVSETAKGVRADDFPDSWPAGRD 1014 Query: 855 GNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV 914 G ++ L+YQFEPG+ ADGVT HIPL +LNQVE GF WQ+PGLR +LV LI+SLPK + Sbjct: 1015 GEHRVSLTYQFEPGSAADGVTAHIPLAILNQVEPDGFTWQVPGLREDLVTELIRSLPKAL 1074 Query: 915 RRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRM-TGVTVDREDWHWDQVPDHLKITF 973 RR++VPAPNYA A LGRV P + PLL LEREL R+ G TV R D D++P HL+ITF Sbjct: 1075 RRSYVPAPNYARAVLGRVGPADGPLLAVLERELNRIGGGTTVSRADLDLDRLPPHLRITF 1134 Query: 974 RVVD--------------------DKN------------KKLKEGRSLQDLKDALKGKVQ 1001 RV D D + L EG+ L +LK L K+ Sbjct: 1135 RVYDGTGGRRTGGGQADDDGQAGRDGGGDRRQKSAESARRTLAEGKDLDELKRTLAPKLT 1194 Query: 1002 ETLSAVADDGIEQSGLHIW-SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 +SA + +E++GL W G +P + E++ G ++V+ +PALV E VA+++ Sbjct: 1195 AAVSAAGGN-LERTGLTGWGDLGTIPRTVERRAGRHQVRGFPALVAEPGGVALRVLATEA 1253 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 + +A G R LLL ++ SPI+Y++ +L N KL L +P+ V L+DD I+ D L Sbjct: 1254 DAARAHPLGTRALLLASVASPIRYINTQLSNATKLALRHHPHDSVGALLDDAIAAAADAL 1313 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMAL 1180 I GGPVW E GF L ++VRAEL + + + + E++LT ++ R+ A Sbjct: 1314 IAEAGGPVWDEAGFERLRDEVRAELPERSLAVVRAAERVLTLAHDVETRIDALTGRPTAG 1373 Query: 1181 G-------LSDIK----------------------------------------------- 1186 L+D++ Sbjct: 1374 RASARPVQLTDLRSLGSAFAAAQGGKAQGGKAQSAKAQNGRAQGAANLSPALTASIEDLR 1433 Query: 1187 AQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQ 1246 Q+ L+Y GF+ G G RL D RYL +RL++L D ++ ++ KV V+ A+ + Sbjct: 1434 RQLAELIYPGFLAGAGADRLDDLARYLTGALRRLDRLPADATAEQPKLAKVTRVRTAYDE 1493 Query: 1247 WINK-LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 LPP D+ +RWMIEELR+S FAQ L TPYP+S++R+ ++M++++ Sbjct: 1494 LAADLLPPGTAPGPDLTRLRWMIEELRISLFAQTLRTPYPVSEERLYRSMDELA 1547 >UniRef50_Q31H28 ATP-dependent helicase HrpA n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31H28_THICR Length = 1342 Score = 1445 bits (3742), Expect = 0.0, Method: Composition-based stats. Identities = 579/1331 (43%), Positives = 823/1331 (61%), Gaps = 51/1331 (3%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPD-------AQQAIFQEMAKEIDQAAGK 60 +A+ + +D +++DR S+++ N + + + ++ Sbjct: 23 DKSAVIKAVDQALVKDRFFLSKQIQRFNVHANTSEADFEALKNDQAWLKFCDRLAKSVAT 82 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V + A P+ITY DNLPV++++ +ILE I+++QVV++AGETGSGKTTQ+PKIC+E GRG Sbjct: 83 VQKNQQAVPKITY-DNLPVAERRDEILELIQNNQVVVIAGETGSGKTTQIPKICLEAGRG 141 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 + G IG TQPRRLAAR+VA RIAEEL + G +GY+VRF D V +++K+MTDGILLA Sbjct: 142 VFGRIGCTQPRRLAARSVAERIAEELGSSLGQLVGYQVRFHDQVHQQSLLKVMTDGILLA 201 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ D L QYDTIIIDEAHERS+NIDFLLG LK+LLP+R DLK+IITSATID ERF+ Sbjct: 202 EIQNDPYLNQYDTIIIDEAHERSINIDFLLGILKKLLPKRRDLKLIITSATIDTERFASF 261 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDT----ERDQLQAIFDAVDELSQ-ESHGDILI 295 F APIIEVSGRTYPVEVRY P+V+ DD E+D AI A++ELS+ + GD+L+ Sbjct: 262 FEGAPIIEVSGRTYPVEVRYNPLVKIEDDEGNEFEQDIPTAIVYALEELSEIDPFGDVLV 321 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 F GER+I++TA+ L K NL++TEI+PLYARLS +EQN+VFQ+ RR++L+TNVAETSL Sbjct: 322 FQVGERDIKETAEVLRKQNLKNTEIVPLYARLSMAEQNKVFQTSQKRRVILSTNVAETSL 381 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGIK+VIDPG RISRYS R+KVQRLPIE ISQASANQR GRCGRVS G+CIRLY ED Sbjct: 382 TVPGIKFVIDPGLVRISRYSVRSKVQRLPIEKISQASANQRAGRCGRVSSGVCIRLYDED 441 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DF SRPEFT PEI RT+LA+VILQMT + LG + FPF+E P+ + I DG R L E+GA+ Sbjct: 442 DFKSRPEFTPPEIHRTSLATVILQMTQMKLGSVKHFPFIEPPEDKAINDGFRQLHEIGAL 501 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 +LT GR L++LP+DPR+A+MVLE QK+G + E +II +A+SIQDPR+ Sbjct: 502 DEK-----RRLTESGRHLAKLPLDPRMAKMVLEGQKNGVLAEVLIIAAAISIQDPRDMNE 556 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 +QA+++ H+ F D SDFL F+NLW + ++++ LS N R+LC+T++L+YLR++EW Sbjct: 557 SNRQAANQAHKVFEDPRSDFLFFLNLWRFYEDKRRHLSQNKLRKLCKTNFLSYLRMKEWH 616 Query: 596 DIYTQLRQVVKELGIPVNS-----------------EPAEYREIHIALLTGLLSHIGMKD 638 D++ QL +K + + V +H +L+ GLL +I M+D Sbjct: 617 DLFFQLEMSLKRISVKVGELHLYEEVKKGKTVTERLSDTHSMAVHRSLMAGLLGNIAMRD 676 Query: 639 ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 D+ Y GARN + I P S LFK+ PKW++ ELVET++L+ R A ID WVE +A H Sbjct: 677 -DENSYLGARNTKLFIHPSSVLFKRKPKWMLSGELVETTKLYARNNAIIDVNWVEAIAPH 735 Query: 699 LIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGD 758 LIK +Y++PHW++ G V A E VT+YGLPIV R+ NY I+P R++F+RH LVEG+ Sbjct: 736 LIKHSYTDPHWQKKAGQVGAFESVTLYGLPIVNRRRCNYGPINPKEARKIFLRHGLVEGE 795 Query: 759 WQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWK 818 ++ AFF N K+ AE+ +E K RR D LV+++ L++FY + I + S F+ W + Sbjct: 796 LNSKVAFFVHNQKMIAEIHHIESKLRRPDFLVEEDVLYDFYAKHIPEHIYSLPAFEKWVR 855 Query: 819 KVSRETP---DLLNFEKSMLIKEGAEKISKLDYPNFWHQ-GNLKLRLSYQFEPGADADGV 874 K + P L + L+K+ + ++YP+ L L + Y FEPG DG+ Sbjct: 856 KTEKTDPEALKALYLTQEFLLKQSYDSRLDVEYPDQVQIKNQLDLDVDYFFEPGKAQDGM 915 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP 934 V +PL LN V+ FEW PGL +E IK+LPK +R+ F+PAPN AE L + P Sbjct: 916 VVKVPLSALNLVQAEDFEWLTPGLLKEKTAFYIKALPKQLRKQFIPAPNTAELVLKEMAP 975 Query: 935 ------LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRS 988 + + L L R V D+ ++P++L+ F + DDK KK+ E Sbjct: 976 NKKLDGRKANYVTQLVWALNRRAQQKVTSHDFEAVELPEYLEPYFVLQDDKGKKIAEKAD 1035 Query: 989 LQDLKDALKGKVQETLSAVADDGI-EQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDE 1047 L+ LK + V + + E + W FG L +S + ++ A+PAL Sbjct: 1036 LEALKTEYQHLVDARIQKHQSKKMPENRIIESWDFGDLADSQTIRSQGIEMVAYPALQVS 1095 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 D++ + L + + + L+ + KYL +KLP K L + PYG E Sbjct: 1096 GDTIELALLGDEDSAQAHHAEAVLALIKKELVEKEKYLQKKLP-MQKACLCYAPYGTCQE 1154 Query: 1108 LIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNIN 1167 L I + +L+ + + + F A+ E R++ + IA QV ILTA I Sbjct: 1155 LTQQVIDRALFQLV-PHPEKIRKQTEFEAILETARSKWIEQAQQIASQVNTILTAHQKIA 1213 Query: 1168 KRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDP 1227 K++KG V+ ++DI+ Q+ L+ + FV + RYLQ +EKRL K+ VDP Sbjct: 1214 KQVKGNVNPRWLASVADIRTQLDQLISKDFVRVTPEEWFKQLPRYLQGLEKRLAKIDVDP 1273 Query: 1228 HRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 +D+ + +++ + A++ + PA + + EIRW+IEELR+S FAQ + T P+S Sbjct: 1274 SKDQKAIREIQPILDAFETLAKE--PAYQNHSGLVEIRWLIEELRLSLFAQPMKTLKPVS 1331 Query: 1288 DKRILQAMEQI 1298 +R+ + ++ + Sbjct: 1332 IQRLQKKLKTL 1342 >UniRef50_B2GLW1 ATP-dependent RNA helicase HrpA n=7 Tax=Bacteria RepID=B2GLW1_KOCRD Length = 1418 Score = 1445 bits (3741), Expect = 0.0, Method: Composition-based stats. Identities = 670/1372 (48%), Positives = 866/1372 (63%), Gaps = 141/1372 (10%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 A P I YPDNLPVS +++DI+ AIR++QVV+VAGETGSGKTTQLPK+C+ELG G +GLIG Sbjct: 49 ATPRIVYPDNLPVSARREDIMSAIRENQVVVVAGETGSGKTTQLPKMCLELGLGERGLIG 108 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AAR+VA RIA EL G +GY+VRF+ V ++ +KLMTDGI+LAEI D Sbjct: 109 HTQPRRIAARSVAERIAHELGERVGATVGYQVRFTSEVGRDSRIKLMTDGIMLAEISHDP 168 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN---- 242 L +Y+ IIIDEAHERSLNIDFLLGYL+ LLP+RPDLK++ITSATIDP+RF+ HF Sbjct: 169 TLSRYNAIIIDEAHERSLNIDFLLGYLRRLLPQRPDLKVVITSATIDPQRFAEHFAQPDP 228 Query: 243 --------NAPIIEVSGRTYPVEVRYRPIVEEAD---------------DTERDQLQAIF 279 AP+IEVSGRTYPVE+RYRP+ +E D +RD + A+ Sbjct: 229 EHPEAEPVPAPVIEVSGRTYPVEIRYRPLTQERSGDGGPDEEDTGDGLADEDRDPIDAVC 288 Query: 280 DAVDELSQESHGDILIFMSGEREIRDTADALNK-----LNLRHTEILPLYARLSNSEQNR 334 DAV ELS+E GDIL+F +GEREIRD DAL K +L T+ILPL+ RLS +EQNR Sbjct: 289 DAVVELSREPRGDILVFFAGEREIRDAQDALQKVIDSHRSLAGTQILPLFGRLSMAEQNR 348 Query: 335 VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 VF S RRIVLATNVAETSLTVPGIKYV+DPGTARISRYS RTKVQRLPIE ISQASA Sbjct: 349 VFSQSSHRRIVLATNVAETSLTVPGIKYVVDPGTARISRYSARTKVQRLPIERISQASAK 408 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAA 450 QR GR GR S+G+CIRLYSE+DF SRPEFTDPEILRTNLA+VILQM ++G+ GDI Sbjct: 409 QRSGRSGRTSDGVCIRLYSEEDFESRPEFTDPEILRTNLAAVILQMISVGVVREPGDILD 468 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK------------------------- 485 FPFV+ PD R ++DGV LL+ELGA+ ++ + Sbjct: 469 FPFVQKPDPRAVKDGVVLLQELGALRGPGASAEHDDAASPPARRSRGGRRGRGRKGGARG 528 Query: 486 -LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT G L+ LPVDPRL RM++EA + GC RE +++T+AL++QDPRERP++K+QA+DE Sbjct: 529 PLTRTGEILAALPVDPRLGRMIVEADRRGCAREVLVLTAALTVQDPRERPLEKRQAADEF 588 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H RF DK SDFL++ LW YL EQQ LSS+ FR+LCR +YLN+LR+REWQD+Y QLRQ+ Sbjct: 589 HARFKDKTSDFLSYGLLWQYLQEQQAELSSSQFRKLCRREYLNFLRIREWQDLYAQLRQI 648 Query: 605 VKELGIPVNSE-----PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 ++ GI V A ++H +LL+GLLS+IG++D +EY GAR RF+IFPGS Sbjct: 649 ARQSGIDVGGSREIDVAAHQDDVHKSLLSGLLSNIGVRDERSREYRGARGTRFAIFPGSA 708 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 LFKK P W++ AELVETSRLW R A I PEW E +A L+KR+YSEPHW R++GAVMA+ Sbjct: 709 LFKKSPDWIVSAELVETSRLWARTNAAIQPEWAEEIAPSLVKRSYSEPHWSRSRGAVMAS 768 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 EKVT+YGLP+V+ R V +S IDP L RELFIRHALVEGDWQTRH F + N K AEVEEL Sbjct: 769 EKVTLYGLPLVSERPVLFSSIDPELSRELFIRHALVEGDWQTRHTFVKRNRKALAEVEEL 828 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E++ RR+D+ VDD+ LF+FYD R+ +V+S RHFD+WWKK + LL+ LI Sbjct: 829 ENRMRRKDLRVDDQVLFDFYDARVPANVVSQRHFDAWWKKARHQDEHLLDLTPEDLIAPE 888 Query: 840 AEKISKLDYPNFWHQ----GNLKLRLSYQFEPGAD-ADGVTVHIPLPLLNQVEESGFEWQ 894 A + +P WH G+L L L Y+F PG D ADGVTV IP+ L+++ FEW Sbjct: 889 APALDTDSFPRSWHVHSPEGDLSLDLDYEFAPGTDTADGVTVRIPVLFLDRLAPEQFEWH 948 Query: 895 IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK----PLELPLLDSLERELRRM 950 IPGLR ELV ALIKSLPK VRRNFVPAP+ A A + R+ P LL++L LRRM Sbjct: 949 IPGLRVELVTALIKSLPKAVRRNFVPAPDTAAAAVRRLDEEFDPPSGSLLEALATVLRRM 1008 Query: 951 TGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK------------DALKG 998 G V D+H + +P HL++ F V D ++ L G L +LK +L Sbjct: 1009 RGHPVQASDFHPETLPPHLRMRFEVRDARSAVLGRGDDLTELKQRLRPRVREALAQSLGQ 1068 Query: 999 KVQETL------------------------------------------SAVADDGIEQSG 1016 + A + +E++ Sbjct: 1069 AAAQLYDAAGTSASAASGGDDDAAPGSRRGRRSGRDDRKGRGSARPDERAASSASLERTD 1128 Query: 1017 LHIWSFGQLPESYEQKRGNYKVKAWPALVD---------ERDSVAIKLFDNPLEQKQAMW 1067 L W P S E V +P LV E V +++ +P EQ+ A Sbjct: 1129 LRAWPEPDPPRSVETTVAGQTVTGYPTLVAVAPEKPGSTEPPRVDLRILSDPEEQRAAQR 1188 Query: 1068 NGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP 1127 +G+ LL +PS +Y+ + L + +L NP+G V LI DC +D+L+ + P Sbjct: 1189 DGVIALLQRVLPSVHRYVVDHLSQRERLIFTQNPHGSVEALIHDCTGAAIDRLVPHD--P 1246 Query: 1128 VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKA 1187 +T F L E VRAEL DTV D+ V LT + KRLK + +D+ Sbjct: 1247 PFTRAEFDRLAEHVRAELIDTVFDVTALVTTALTEATTVRKRLKKPGSLGAVPAFTDMAE 1306 Query: 1188 QMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQW 1247 Q+ L++ GFV G++ L RYL + RL+KL+ RD M V ++ A++ Sbjct: 1307 QVDRLIHPGFVARTGWQALQHLPRYLAGVNARLDKLSGHLQRDAVAMQTVHELEAAYRAA 1366 Query: 1248 INKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 ++ +PP ++EIRW +EELRVS+FAQ+LGT + +S+KR+ + + ++ Sbjct: 1367 LDTVPPTVPTPAALREIRWDLEELRVSFFAQELGTAHTVSEKRLRKKLRELG 1418 >UniRef50_Q1YSZ9 ATP-dependent helicase HrpA n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=Q1YSZ9_9GAMM Length = 1309 Score = 1444 bits (3739), Expect = 0.0, Method: Composition-based stats. Identities = 585/1300 (45%), Positives = 835/1300 (64%), Gaps = 16/1300 (1%) Query: 3 EQQKLTFTALQQRLDS-LMLRDRLRFSRRLHGVKKV-KNPDAQQAIFQEMAKEIDQAAGK 60 + F LQ +D RD R SR+L + + K + +Q+ + + Sbjct: 10 PSGQQDFQRLQLLVDETASTRDCFRLSRQLRDLSQQYKRGLDISSGWQQWHSALLKTQAL 69 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 R P +YP+ LPVS + +I E + HQV++VAGETGSGKTTQ+PKIC++ GRG Sbjct: 70 THSRRQTIPAFSYPE-LPVSARADEIAELLTKHQVIVVAGETGSGKTTQIPKICLQAGRG 128 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 ++GLIGHTQPRR+AARTVA RIAEELK G +GY+VRFSD + N+++KLMTDGILLA Sbjct: 129 VRGLIGHTQPRRIAARTVATRIAEELKVNIGEAVGYQVRFSDQSAPNSLIKLMTDGILLA 188 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ+DR L YDTIIIDEAHERSLNIDFLLGYLK LLP+RPDLKIIITSATID ++FS+H Sbjct: 189 EIQRDRFLSAYDTIIIDEAHERSLNIDFLLGYLKNLLPQRPDLKIIITSATIDVDKFSKH 248 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILIFMSG 299 FN+AP++EVSGR++PV+V Y DD E D+ Q I D + ++ GD+LIF+SG Sbjct: 249 FNDAPVVEVSGRSFPVDVIY----NHPDDLEADRDQMIVDCLQDIHHNQKAGDVLIFLSG 304 Query: 300 EREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPG 359 EREIR+ A+ + L HTE++PLYARLS +EQ+++F H GRRIVL+TNVAETSLTVPG Sbjct: 305 EREIREVNLAIKRAQLPHTEVVPLYARLSLAEQSKIFSPHRGRRIVLSTNVAETSLTVPG 364 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 I+YVID G AR+SRYS+RTKVQRLPIE ISQASANQR GRCGR+++G+C RLYSE+DF Sbjct: 365 IRYVIDTGRARVSRYSFRTKVQRLPIEAISQASANQRAGRCGRIADGVCYRLYSEEDFEG 424 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 RP FTDPEI+RTNLA+VILQM L +GDI FPFV+ PD R I DG +LLEEL A+T D Sbjct: 425 RPAFTDPEIVRTNLAAVILQMLQLRIGDIRNFPFVDPPDSRMISDGFKLLEELQAVTEDG 484 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 KL+ LG++L +P+DPR ARM+LE+ K+GC+ E MIIT+ LSIQDPRERP DKQQ Sbjct: 485 -----KLSNLGKRLVNIPLDPRFARMLLESAKNGCLAEVMIITTGLSIQDPRERPADKQQ 539 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 A+D+ H+++ + SDF++ +NLW + EQ++ LS N + R C+ ++++YLR+REW+D++ Sbjct: 540 AADQSHKKWQEPNSDFVSLLNLWRHFEEQRQQLSGNQYSRYCKRNHVSYLRMREWRDLHH 599 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 Q+ + L + N+EPAE IH ++L+GLL +G+ DK EY G RN +F IFPGSG Sbjct: 600 QVHTACRGLKLTANTEPAEQDAIHRSILSGLLGQVGILQ-DKWEYLGTRNRKFFIFPGSG 658 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 L KKPPKW+M L+ET++ + A+ID +W+EP+A HL+K++YSEP + + G VMA Sbjct: 659 LSKKPPKWLMAGSLMETTKQFALTVAKIDSDWLEPLAAHLVKKSYSEPFYNKKSGQVMAK 718 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 E+ T++GL IV + Y Q+ P R +FI+ ALVE ++ + F+R N KL AE++ L Sbjct: 719 ERQTLFGLSIVENKNRVYGQVAPQEARNVFIQQALVEEGYRGKGEFYRRNHKLVAELQAL 778 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 E + RRRD+LV+ + +F+FYDQ + + + F+ W K+ +TP LL +K L+ G Sbjct: 779 EDRFRRRDLLVEQQAIFDFYDQLVPEGIYNLTAFEKWRKQAEAKTPKLLLLDKEYLLLRG 838 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 + + +P + +L Y F+PG DGV+ +PL LL+Q+ FEW +PG+ Sbjct: 839 LSQDEQAQFPETISCDGIPYQLRYHFQPGHAEDGVSALVPLALLHQLPRYFFEWLVPGML 898 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRED 959 R+ IALIKSLPK RR+FVP P++ + FL + K + PL + L LR ++GV ++ E Sbjct: 899 RDKCIALIKSLPKQTRRHFVPVPDHVDVFLRKAKSQDRPLTEVLAEHLRTVSGVVIEPEQ 958 Query: 960 WHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHI 1019 W + + + ++ F + DD+ + RSL+ L+ K ++ + L AD + G+ Sbjct: 959 WRQESLDNWYQMNFVLEDDRGVTIAMARSLEQLQRDFKQQISQGLEKAADQSTSRQGITE 1018 Query: 1020 WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIP 1079 W F +LPE + G +KAWPAL D DSV++++ DNPL+ ++ G RL LL Sbjct: 1019 WDFDELPEEVALQHGKISIKAWPALRDCGDSVSLEVMDNPLQAEKVSRQGQLRLALLRGR 1078 Query: 1080 SPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHE 1139 +KYL + L L L G LID IS + + + V ++ F ++ Sbjct: 1079 EQVKYLEKNLLRGKDLALKAANVGARQRLIDALISASFQQAVFSGHSVVRDQQQFDQAYD 1138 Query: 1140 KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVT 1199 + +++ + +E +L + ++ K+L+G + + DI+ Q+ L + Sbjct: 1139 QGISQVVGLAQSYTESIETLLPRLHDLQKQLRG-LGLPAIYAAEDIRNQLDWLFASETLC 1197 Query: 1200 GNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN-VQQAWQQWINKLPPARRED 1258 + + RY+ AI+ R+EKL +DR + ++ + + Q I P + + Sbjct: 1198 TVTDEIISQYPRYINAIQVRVEKLTQQQSKDRQHIAEISDLLTDCRQALIEDQPLSSDLE 1257 Query: 1259 EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + + W++EE RVS FAQQL T P+S KR+ + ++ Sbjct: 1258 AALLDYCWLVEEYRVSLFAQQLKTRVPVSLKRLNKRWVEV 1297 >UniRef50_C0VVM1 HrpA family ATP-dependent helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVM1_9CORY Length = 1344 Score = 1440 bits (3728), Expect = 0.0, Method: Composition-based stats. Identities = 620/1349 (45%), Positives = 848/1349 (62%), Gaps = 67/1349 (4%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + +L RL S+ ++D RF RL + + K++ A ++ Sbjct: 8 SSTSKKSLYARLASVRIQDERRFRARLKKA-------RTDRALEAIKKDLTHAEKRIAGV 60 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 + P +TYP LPVS++ DI AIRD+QVVI+AGETGSGKTTQ+PKIC+E+GRG +G+ Sbjct: 61 TSRIPTVTYPPELPVSRRVDDIAAAIRDNQVVIIAGETGSGKTTQIPKICLEIGRGRRGM 120 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRRLAARTVA RIAEE+ G +GY +RF D V +T VK+MTDGILLAE+Q+ Sbjct: 121 IGHTQPRRLAARTVAERIAEEVGQNIGESVGYAIRFDDKVGPHTAVKIMTDGILLAEMQR 180 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN- 243 DR L YDTIIIDEAHERSLNIDF+LGYLK LLP+RPDLK+IITSATIDPERF+RHF + Sbjct: 181 DRFLNAYDTIIIDEAHERSLNIDFILGYLKRLLPKRPDLKVIITSATIDPERFARHFADR 240 Query: 244 ----APIIEVSGRTYPVEVRYRPIVEEADDTE--RDQLQAIFDAVDELSQESHGDILIFM 297 APIIEVSGRTYPVE+RYRP+VE D E D+L + A++EL QE GDIL F Sbjct: 241 SGRPAPIIEVSGRTYPVEIRYRPLVEIHGDKEVAIDELDGLLAALEELMQEGPGDILCFF 300 Query: 298 SGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTV 357 +GER+IRD DA++ ++ E+ PL+ RLSN+EQ+RVF H GRRIVLATN+AETSLTV Sbjct: 301 AGERDIRDALDAISARKFKNVEVTPLFGRLSNAEQHRVFSPHRGRRIVLATNIAETSLTV 360 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI YV+D G ARISRYS RTKVQRLPIEPISQASANQR GRCGRV+ GI IRLYSE+DF Sbjct: 361 PGIHYVVDTGLARISRYSNRTKVQRLPIEPISQASANQRSGRCGRVANGIAIRLYSEEDF 420 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 SRPEFTDPEI RTNLASVILQM L LGDI FPFV+APD+++I++G++LL ELGAI Sbjct: 421 ASRPEFTDPEIHRTNLASVILQMALLRLGDIRNFPFVQAPDEKSIRNGIQLLLELGAINE 480 Query: 478 DEQAS-AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + + +LT +GRQ++++PVDPRLARM++EA+K + II +AL++QD RERP+D Sbjct: 481 QKPGDESPRLTAVGRQIARIPVDPRLARMLIEAEKMHVLAPVTIIVAALTLQDVRERPLD 540 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 KQQ +D+ H RF DK SD + ++ LW YL + LS N FR+ + +YL+Y+R REW+D Sbjct: 541 KQQQADQMHSRFKDKGSDLMGYLALWAYLCSLRSRLSGNQFRKRLQREYLHYMRSREWRD 600 Query: 597 IYTQLRQVVKELGIPVNSEP---------------------------------------- 616 + QL V ++L V++ Sbjct: 601 LIRQLVSVYEDLYWNVDTNALWCEDIPDLTAPPNLGCGEGSQQSKKAAAGAAPLSPVDAA 660 Query: 617 ----AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAE 672 + IH ALL+GLLSHIG++ D +E++GAR F IFPGSGL KKPP+++M AE Sbjct: 661 HAYFTDSDSIHKALLSGLLSHIGVRKGDSKEFSGARGTSFLIFPGSGLAKKPPEFIMAAE 720 Query: 673 LVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAA 732 LV+TSRLW R A I+PEWVE +A HL+KRTYSEP W + + A M EK VYG+PI+A Sbjct: 721 LVDTSRLWARGVAAINPEWVEGLAPHLLKRTYSEPTWSKKRSAAMVHEKTLVYGVPIIAD 780 Query: 733 RKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDD 792 R V Y +D R++FIRHALV+G+W T H FF EN +V +LE K+RRRDI VDD Sbjct: 781 RLVQYGAVDEEAARDMFIRHALVQGEWITHHRFFHENQDKLEQVRDLEEKARRRDITVDD 840 Query: 793 ETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFW 852 +TLF FYD+ + + S F+ WWK+ +++P LL+F+ LI A+ +++ +P+ W Sbjct: 841 DTLFAFYDRILPSHITSEIRFNHWWKRRKQKSPHLLDFDMDKLINPEADTVAEESFPDAW 900 Query: 853 HQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPK 912 QG+L+ LSY FEPG+ DGVTV IPLPLL V+ F WQ+ GLR ELV LI+ LPK Sbjct: 901 RQGSLEFELSYHFEPGSPFDGVTVRIPLPLLATVDPEPFTWQVHGLRLELVTELIRCLPK 960 Query: 913 PVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT 972 RR VPAP+YA L R+ P E L++ L R + ++ D++ +P H+++T Sbjct: 961 QYRRLLVPAPDYAAKVLPRLIPYEGTLVEQLTSIFRSLGLRNLEETDFNLGSLPPHVQVT 1020 Query: 973 FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWS---FGQLPESY 1029 F VD + + L+ L++ G+++ ++ A S + W+ G +PE+ Sbjct: 1021 FAAVDKQGTITDSDKDLRALQNRRSGQIRSSIGKAARSSS-SSLVQSWTKENLGDVPETV 1079 Query: 1030 EQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKL 1089 + + V A+PALV ++ ++ + +M +L+ + K + + L Sbjct: 1080 DTEVDGQTVTAYPALVADQGGFKVQAMPTKAAAEASMVQATMTMLISAVTIGTKSMLKGL 1139 Query: 1090 PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTV 1149 P + ++ + P+G LI+D + L+ +GGPV + E F L KV+AE+ V Sbjct: 1140 PLQQRVAVENYPHGGADGLINDARIAAIRDLMLKHGGPVRSPEQFEELKTKVKAEVPSYV 1199 Query: 1150 VDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDT 1209 + L + + L + DI+ Q+ +V + V+ G +RL Sbjct: 1200 RQTVTALAPALYEYEALREEL----THWDGPAIDDIRKQLDIIVPKNAVSTFGIQRLTHL 1255 Query: 1210 LRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIE 1269 RY+QA RL+ L P +D + ++ + +N+LP + R + VK+I W+I+ Sbjct: 1256 QRYIQAARIRLDDLEAAPQKDEQRQDIIDRLAGQLSSKLNRLPKSARHSKKVKDIIWLIQ 1315 Query: 1270 ELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 ELRVS FAQ+LGT +S+K+I + + + Sbjct: 1316 ELRVSLFAQRLGTATKVSEKKISKQITAL 1344 >UniRef50_D2S4R8 ATP-dependent helicase HrpA n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S4R8_9ACTO Length = 1333 Score = 1438 bits (3723), Expect = 0.0, Method: Composition-based stats. Identities = 692/1339 (51%), Positives = 907/1339 (67%), Gaps = 53/1339 (3%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 L+ RL L L D R RRL G +K ++ +A+ +A ++ A ++ R A Sbjct: 3 TPPDDLRARLAGLTLEDEHRLRRRLDGTRKTRDAEARARQRARIAADVAAAEERIARRRA 62 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 A P + YP LPVS ++ DI A+R+HQVV+VAGETGSGKTTQLPKI +ELGRG+ G IG Sbjct: 63 AVPTVRYPAELPVSARRDDIAAALREHQVVVVAGETGSGKTTQLPKIALELGRGVTGRIG 122 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRR+AARTVA RIAEEL+T G +G+KVRF+D V D+T+VK+MTDG+LLAEI +DR Sbjct: 123 HTQPRRIAARTVAERIAEELETPLGEVVGWKVRFTDQVGDSTLVKVMTDGVLLAEIGRDR 182 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--- 243 LL QYDT+IIDEAHERSLN+DFLLGYL LLPRRPDLK++ITSATID +R ++HF Sbjct: 183 LLRQYDTLIIDEAHERSLNVDFLLGYLARLLPRRPDLKLVITSATIDVDRIAKHFTGLGE 242 Query: 244 -------------------APIIEVSGRTYPVEVRY---RPIVEEADDTERDQLQAIFDA 281 P++EVSGRTYPVEVRY + D +RDQ+ AI DA Sbjct: 243 KGQSAGLGDDGHGSADGAEVPVVEVSGRTYPVEVRYRPVVDPDDPDADPDRDQVTAIADA 302 Query: 282 VDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG 341 V+EL+ E GD+L+F++GEREIRDTAD L + E+LPLY+RLS ++Q+RVF H+G Sbjct: 303 VEELAAEGPGDVLVFLAGEREIRDTADVLTERF-PSVEVLPLYSRLSAADQHRVFAPHTG 361 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 RR+VLATNVAETSLTVPGI+YV+DPGTARISRYS R KVQRLPIEPISQASA QR GRCG Sbjct: 362 RRVVLATNVAETSLTVPGIRYVVDPGTARISRYSSRLKVQRLPIEPISQASARQRSGRCG 421 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 R SEGI IRLY+E+D+ RPE+TDPEILRT+LASV+LQM AL LGD+A FPF++ PD+R Sbjct: 422 RTSEGIAIRLYTEEDYEGRPEYTDPEILRTSLASVLLQMAALELGDVADFPFIDPPDRRA 481 Query: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 + DGV LLEELGA+ D LTP GR L+ LP+DPR+ARMV+EA + G + E ++I Sbjct: 482 VADGVALLEELGALGEDGG-----LTPTGRALATLPLDPRMARMVVEADRRGVLEEVLVI 536 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 + L+IQDPRERP + QQA+D H RF D+ SDFLA +NLW Y+ EQQ+ALS + FRR Sbjct: 537 AAGLTIQDPRERPSEHQQAADTAHARFADENSDFLALLNLWRYVTEQQEALSGSQFRRTL 596 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS--EPAEYREIHIALLTGLLSHIGMKDA 639 + ++L+YLR+REWQD+Y QLR + LG+ + R +H ALL GLLSH+G++ Sbjct: 597 KREFLHYLRIREWQDLYGQLRSTARRLGMTTGELATEPDERGVHTALLAGLLSHVGLQVE 656 Query: 640 D-----------KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARID 688 + +EY GARNARF + PG+ L KKPP+WV+ AELVETSRL+ R ARID Sbjct: 657 EGKGRDGDRRRGGREYLGARNARFVLAPGTPLAKKPPRWVVAAELVETSRLFARTVARID 716 Query: 689 PEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCREL 748 PE VE +A+HL+KR YSEP W+ +G+V+ATE+VT+YG+P+V R+V Y IDP + REL Sbjct: 717 PEVVERLAEHLVKRQYSEPRWDAKRGSVVATERVTLYGIPLVVGRRVQYGSIDPVVSREL 776 Query: 749 FIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVI 808 FIRHALVEG+W T H F+ +N K V ELE ++RRRDI VDDETLFE YD RI DV+ Sbjct: 777 FIRHALVEGEWTTHHRFWHDNQKAMQRVAELEERARRRDIRVDDETLFELYDARIPADVV 836 Query: 809 SARHFDSWWKKVSRETPDLLNFEKSMLIKEGAE-KISKLDYPNFWHQG-NLKLRLSYQFE 866 S RHFD WWK R TPDLL F ML A ++ D+P+ L L LSY F Sbjct: 837 STRHFDRWWKAARRGTPDLLTFTPEMLTNAAAAGQVRVEDFPDEVPLSQGLTLPLSYAFA 896 Query: 867 PGADADGVTVHIPLPLLNQV----EESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAP 922 PGA DGVTV +PL +L+ V + +PGLR ELV AL+++LPK +RR VP P Sbjct: 897 PGAPQDGVTVDVPLAVLDTVAERTSGESLAFTVPGLREELVTALLRTLPKQLRRALVPIP 956 Query: 923 NYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKK 982 + L R+ P E PLL +LERELRR GV V + W DQVPDHL+ TFRVVDD+++ Sbjct: 957 DRVREVLPRIAPNE-PLLPALERELRRAAGVVVPPDAWAPDQVPDHLRATFRVVDDRHRP 1015 Query: 983 LKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWP 1042 L G+ LQ L+ + + + +L+A A D +E++G W+FG LP + E +RG + V A P Sbjct: 1016 LATGKDLQALRREVAPQSRASLAAAASD-VERTGQTAWTFGTLPRTVEVRRGGHVVTAHP 1074 Query: 1043 ALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPY 1102 ALVDE +V +++ +E + W G RRLL+L SP + + + L K++L L FNP Sbjct: 1075 ALVDEGTTVGVRVVATEVEATRLTWRGARRLLVLVAGSPARQVVKSLSPKSRLALQFNPD 1134 Query: 1103 GKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTA 1162 G++ L+DDC+ D+L+ A GGP E FAAL + RA+L D ++VE +L Sbjct: 1135 GEIPALVDDCVDAAADELLAAAGGPPRNEAAFAALVQTARAQLLPLTTDTVRRVEAVLVQ 1194 Query: 1163 VFNINKRLKGRVDMTMAL-GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLE 1221 + + + ++D++ QMGGL++RGFV G +RL D +RYL+ + RLE Sbjct: 1195 AREVAVAIGAAPGRRVPEAAVADLRRQMGGLLHRGFVAAAGRRRLPDLVRYLRGMVHRLE 1254 Query: 1222 KLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLG 1281 KL + RD M +V V ++Q ++P D+ V +RWM+EELRVS FAQ +G Sbjct: 1255 KLPANAVRDELWMQQVAAVSAEYEQLRAQVPSTGAPDDPVARVRWMLEELRVSLFAQTVG 1314 Query: 1282 TPYPISDKRILQAMEQISG 1300 TP P+S++R+ +A++ ++ Sbjct: 1315 TPRPVSEQRVYKAIDALTA 1333 >UniRef50_D2NU22 HrpA-like helicase n=4 Tax=Bacteria RepID=D2NU22_9MICC Length = 1504 Score = 1434 bits (3713), Expect = 0.0, Method: Composition-based stats. Identities = 677/1437 (47%), Positives = 880/1437 (61%), Gaps = 143/1437 (9%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 Q+ R S + R +RR + + QQ + Q Sbjct: 63 GAQKNNADRKSSSRGASERNSNASRSNRRGVANNRARKQGNQQGGTNGNRQGEQQNRPAS 122 Query: 62 LLREAARPE-ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 E PE ITYP+ LPVS+++ DI+ AIRD+QVVI+AGETGSGKTTQ+PK+C++LG G Sbjct: 123 RRYEPFIPEVITYPEELPVSERRDDIMNAIRDNQVVIIAGETGSGKTTQIPKMCLDLGLG 182 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 KGLIGHTQPRRLAAR+VA RIAEEL + G +GY+VRF+ V +++ +KLMTDGILLA Sbjct: 183 EKGLIGHTQPRRLAARSVAERIAEELGQKIGETVGYQVRFTSEVGEHSAIKLMTDGILLA 242 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ D+LL +Y T+IIDEAHERSLNIDF+LGYLK +LP+RPDLK+IITSATIDPERF+RH Sbjct: 243 EIQNDKLLRRYSTLIIDEAHERSLNIDFILGYLKRILPQRPDLKVIITSATIDPERFARH 302 Query: 241 FNN-----------------------------APIIEVSGRTYPVEVRYRPIVEE----- 266 F+ PIIEVSGRTYPVE+RYRP+ EE Sbjct: 303 FSPSYVPGKGIVDENLSAEEREIAEAILPDDAPPIIEVSGRTYPVEIRYRPLDEEDYLSD 362 Query: 267 -ADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR----HTEIL 321 + + D I DA+ ELS+E+ GDILIF SGEREIRD DA+ + L+ + E+L Sbjct: 363 DEIEDDHDPTDGILDAIKELSKEAPGDILIFFSGEREIRDAKDAIEAMVLKSPRLNYEVL 422 Query: 322 PLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 PLYARLS +EQ+RVF S RIVLATNVAETSLTVPGIKYVID GTARISRYS RTKVQ Sbjct: 423 PLYARLSLAEQHRVFSPGSRPRIVLATNVAETSLTVPGIKYVIDTGTARISRYSARTKVQ 482 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMT 441 RLPIE ISQASANQR GRCGRVS+GI IRLYSE+DF SRPEFTDPEILRTNLA+VILQM Sbjct: 483 RLPIERISQASANQRSGRCGRVSDGIAIRLYSEEDFNSRPEFTDPEILRTNLAAVILQMI 542 Query: 442 ALGL----GDIAAFPFVEAPDKRNIQDGVRLLEELGAITT------DEQASAYKLTPLGR 491 A+G+ GDI+ FPFV+ P R I DGV LL ELGA+T + ++ LT +GR Sbjct: 543 AIGVVREPGDISRFPFVQPPASRAINDGVNLLRELGALTERPRSPRKGRGNSATLTAIGR 602 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 ++ PVDPRLARM++E + C +E M++ +AL+IQDPRERP D + +D H RF D Sbjct: 603 AMAAFPVDPRLARMIIEGGRRNCAKEMMVLAAALTIQDPRERPADVRAEADAMHVRFVDD 662 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 SDF +F+ LW+Y+ EQQ ALSS+ R++C +Y+NYLR+REWQD++ QLR++ + I Sbjct: 663 TSDFSSFLLLWDYINEQQAALSSSQLRKMCHREYINYLRIREWQDLFAQLREMGRTANIH 722 Query: 612 VN-----SEPAEYREIHIALLTGLLSHIGM----------KDADKQEYTGARNARFSIFP 656 + + A +IH +LL+GLLSH+G+ + +EY GAR +F+IFP Sbjct: 723 ASGGRDINASAHEIDIHKSLLSGLLSHVGVKEEREKDSKGRTRGPREYLGARGTKFAIFP 782 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GSGLFKK P WV+ AELVETSRLW R A IDP+W+E + +HLI YSEPHW + GA Sbjct: 783 GSGLFKKSPDWVLSAELVETSRLWARTNASIDPQWIEEIGKHLISVQYSEPHWSLSSGAA 842 Query: 717 MATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEV 776 +A K T++GL I A R V Y+++D A RELFI+ ALVEG W T+H F+ N + AEV Sbjct: 843 VAYAKGTLFGLTIYADRPVQYARVDAAAARELFIQSALVEGQWHTQHKFYLRNQRALAEV 902 Query: 777 EELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLI 836 EELE + RRRD+ VDD LF FYD RI V R FD WWK+ E + L+F LI Sbjct: 903 EELEARLRRRDLRVDDSVLFAFYDARIPAHVTDVRAFDKWWKQARLEDDNFLDFNPEKLI 962 Query: 837 KEGAEKISKLDYPNFWHQ----GNLKLRLSYQFEPGAD----------ADGVTVHIPLPL 882 E A +P W Q G L L L Y++ P A DGV V +P+ Sbjct: 963 NEEAADYDDSQFPRQWVQRTDSGELTLDLRYEYAPTAGVGGARTDAAKRDGVAVQVPILF 1022 Query: 883 LNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELP---- 938 LNQ+ F WQIPGLR ELV ALIKSLPK +RRNFVPAP+ A A ++ P Sbjct: 1023 LNQLSPEPFRWQIPGLRHELVTALIKSLPKAIRRNFVPAPDVARAACAALEEDYSPATDE 1082 Query: 939 LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKG 998 LL SL LRR+ GV V+ E ++WD VP+HLK+ F+V + +NK L EG+ L+ L+ L Sbjct: 1083 LLPSLALVLRRLRGVVVEPEAFNWDAVPEHLKMGFQVRNARNKILGEGKDLRALQQQLHK 1142 Query: 999 KVQETLSAVADDGIEQ-------------------------------------------- 1014 +++ L+ E Sbjct: 1143 EIRSALADSLGASDEAMAKMVALAQGGSGNSGGSGNSGGSARPGSAKGAKNPAKGTQAEA 1202 Query: 1015 ---------SGLHI-----WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 +GL + G++P ++ V +PALVDE SV +++F Sbjct: 1203 GASGGVREVTGLTAFPADLFPNGEIPRKVQRVIATQAVNGYPALVDEGSSVGLRIFPTEA 1262 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 EQ A G+ RLL L +PSP++Y+ E L +K K+ NP+G + ELI DC +D L Sbjct: 1263 EQLHAQRRGIIRLLQLQVPSPVRYVSEHLSHKEKIVFTQNPHGSIDELIRDCTVAALDHL 1322 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMAL 1180 + P++T ++ L+E VRAEL +TV D+ K V +IL+ + K +K +T Sbjct: 1323 VPHT--PIFTHAAYSELYEHVRAELIETVFDVTKLVAEILSEATALKKAIKKATSLTTMH 1380 Query: 1181 GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENV 1240 +SD+KAQM LVY GFV G+ +L RYL+A + RL KL + HRD ML V+++ Sbjct: 1381 AVSDVKAQMENLVYPGFVAQTGYDQLVHLPRYLKAAQVRLTKLGPNLHRDNQLMLTVQDL 1440 Query: 1241 QQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 + ++ + LP + ++ + WMIEELRVS+FAQ+LGT Y +S+KRI +A + Sbjct: 1441 EDSYDNAVKSLPAGTIVPDALRRVNWMIEELRVSFFAQELGTAYTVSEKRIAKAQRE 1497 >UniRef50_C1ZJL9 ATP-dependent helicase HrpA n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJL9_PLALI Length = 1305 Score = 1429 bits (3701), Expect = 0.0, Method: Composition-based stats. Identities = 533/1304 (40%), Positives = 775/1304 (59%), Gaps = 21/1304 (1%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKV 61 F AL++RL M DR S+ L + + ++++ Sbjct: 7 APTAPDFAALRKRLPEAMAADRSGLSKLLETTARMAQRGQPFDRNLHRFTDWLEKSITAR 66 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 R A RP I Y + LP+ Q++++ L+ + H V+IV GETGSGK+TQLPK C+E RGI Sbjct: 67 NDRLARRPAIHYDNELPIMQRREEFLKLLSQHSVIIVCGETGSGKSTQLPKFCLEAQRGI 126 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 GLIGHTQPRR+AAR+VA R++EEL+ G +GYKVRF + V + +KLMTDGILLAE Sbjct: 127 DGLIGHTQPRRIAARSVAMRLSEELRAPLGQAVGYKVRFQEAVGAESYIKLMTDGILLAE 186 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 IQ D L +YDTIIIDEAHERSLNIDFLLGYLK LL +R DLK+IITSATID ERFS+HF Sbjct: 187 IQSDPHLRRYDTIIIDEAHERSLNIDFLLGYLKRLLTQRKDLKVIITSATIDAERFSQHF 246 Query: 242 ----NNAPIIEVSGRTYPVEVRYRPIVEEAD---DTERDQLQAIFDAVDELSQESHGDIL 294 APIIE SGR+YPVE+ YRPI+ + D D + D QAI +AV E + + GDIL Sbjct: 247 EVDGKPAPIIEASGRSYPVEILYRPILSKGDAAEDNDIDMQQAIVEAVQEATSQGFGDIL 306 Query: 295 IFMSGEREIRDTADALN--KLNLRHTEILPLYARLSNSEQNRVFQ-SHSGRRIVLATNVA 351 +F+ EREI +TA L + H EILPLYARLS +EQ RVFQ S S RRI+LATNVA Sbjct: 307 VFLPTEREIHETAKILRGGERAASHREILPLYARLSAAEQQRVFQVSQSQRRIILATNVA 366 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 E+SLTVPGI+YVID GT R+SRYS R+K+QRLPIEP+SQASANQR GRCGRV GIC RL Sbjct: 367 ESSLTVPGIRYVIDTGTVRLSRYSPRSKIQRLPIEPVSQASANQRAGRCGRVGPGICYRL 426 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 Y E DF +R FT PEILRTNLA VIL+ +LGLG +++FPF++ P +I+DG R L E Sbjct: 427 YDEADFAARDPFTVPEILRTNLAQVILKTESLGLGSLSSFPFLDPPRTESIRDGYRTLFE 486 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 LGA+ D +LT LG++LS++P DPR+AR++ A + C+ E +II SAL QD R Sbjct: 487 LGAVDLDN-----RLTELGKKLSRIPTDPRIARVLFAADEQLCLAEMLIIASALETQDVR 541 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 ERP+ KQ A+DE H +F D+ SDF+ ++ +W++ E + LS + ++ C +YL+ R+ Sbjct: 542 ERPVGKQDAADEAHAKFLDETSDFVTYLKIWDFYHELKAKLSHSQLKKACSQNYLSLTRL 601 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 REW D++ +L ++V+ G+ + + IH A+L G ++I MK D EY A Sbjct: 602 REWSDLHRELSELVRAAGLKIRPRLQDTSAIHRAILAGFPTNIAMKT-DSGEYQMGGGAL 660 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 I+PGSG+ K+ P+W++ AE VET+R + RIA +I+ EWVEP +HL+ RTY +PHW+ Sbjct: 661 GVIWPGSGMAKQKPRWIVAAEFVETTRRFLRIAGKIESEWVEPYVEHLVNRTYHDPHWDA 720 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLK 771 +V+A EKV++ GLPIV RK + +++ A +E+FIR ALVEGD+ AF NL Sbjct: 721 RSRSVVAYEKVSLQGLPIVNRRKTQFGRVNAAQAQEIFIRQALVEGDYPNPPAFLAHNLA 780 Query: 772 LRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFE 831 LR E+E+L+ + R+ ++ D ET +FY QR+ D+ D W + ++++PDLL Sbjct: 781 LRQELEDLQARLRKTSLIADPETQAKFYAQRLPPDIYDGPRLDKWLRIATKDSPDLLKMT 840 Query: 832 KSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGF 891 + L+ + A++ + +P+ G+L+ + Y EPG DG+T+ +P Q+E Sbjct: 841 REDLLAQEADEDWRERFPDQIRVGSLQAEVEYHLEPGTAQDGITIKVPQAAFRQLEWQRL 900 Query: 892 EWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMT 951 W +PGL E ++AL++ LPK R P P + L +K + L+D L +R Sbjct: 901 GWLVPGLLEEKIVALLRGLPKEYRVTLSPIPESVKQILPLLKMGQGSLVDQLAEIVRSRF 960 Query: 952 GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDG 1011 G V + ++P+HL++ R++D+ +++ R L+ + L + Sbjct: 961 GARVLPAMFDESKLPNHLRMNIRLIDNSGEEVLSSREQTQLEAHAGQLIPSELIS---KS 1017 Query: 1012 IEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLR 1071 +E++GL W F + E ++ ++ +PA+VDE +V +KLFD + G+R Sbjct: 1018 MERTGLKTWDFATVHEKVIVRQNGLEIDGFPAIVDEGKTVGLKLFDTAIRALHEHKRGVR 1077 Query: 1072 RLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTE 1131 RL +L + + LP + L + L + I + + + Sbjct: 1078 RLAVLKLQKELSMQVTHLPEIKRWELAAKALPQPFPLKEHLIDLLAMRAVCEGKVLPRSP 1137 Query: 1132 EGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGG 1191 E F + EL + V ++ + + I I RL R+ L D++ Q Sbjct: 1138 EQFQLAIDAGFDELGNAVTEVMRLMSSIFQQTAEIRVRL-DRIPPVHDLTKRDLQRQYQW 1196 Query: 1192 LVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL 1251 L+ GF++ + L RYL+AI R+++L + +DR +++ +E + Q N+ Sbjct: 1197 LLTPGFLSQTPWFWLAQFPRYLKAILLRMDRLTGNAAKDRDRIMNLEPWIVRYAQRWNEH 1256 Query: 1252 PPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 + D +++ RWMIEE R+ F Q++ T P+SDKR+ + Sbjct: 1257 KRRKYVDVELETFRWMIEEYRIHLFVQEMATAVPVSDKRLEKQW 1300 >UniRef50_A0L8U8 ATP-dependent helicase HrpA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8U8_MAGSM Length = 1305 Score = 1420 bits (3677), Expect = 0.0, Method: Composition-based stats. Identities = 544/1289 (42%), Positives = 778/1289 (60%), Gaps = 17/1289 (1%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPDAQ--QAIFQEMAKEIDQAAGKVLLREAARPEI 71 + + M+R R R L +++ ++ + + + +V R P + Sbjct: 15 EDVAHTMIRHRHGLRRALGALQQDHRQGRAIAPHALEKFRQRLTASCDEVAKRRQQLPIL 74 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 YP+ LP+S K++ I +AI HQ+++++GETGSGKTTQLPKIC+ELG G+ G IG TQPR Sbjct: 75 RYPEQLPISSKREAIQQAIAQHQIIVLSGETGSGKTTQLPKICLELGLGVHGYIGVTQPR 134 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R+AA +A +A +L T G +GYKVRF D V ++ +VK++TDG+LLAE QQDR L +Y Sbjct: 135 RIAASGIAQFLASDLGTPLGEKVGYKVRFHDQVGEHALVKVLTDGMLLAETQQDRFLSRY 194 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 + IIIDEAHERSLNIDFLLG LK + RRPDLKIII+SAT+D ++F+ HFN+APII VSG Sbjct: 195 EAIIIDEAHERSLNIDFLLGLLKGITVRRPDLKIIISSATLDTDKFAAHFNHAPIISVSG 254 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADAL 310 RTYPV VRY P+ E+ + +++A+ AV+EL ++ GD+LIF+ GEREI++ A+AL Sbjct: 255 RTYPVAVRYNPLDEKNEPDSDQRMEALLFAVEELFEDLPDGDVLIFLPGEREIKEAAEAL 314 Query: 311 NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 K + H EI+PLYARLS EQ R+F S RRI+L+TNVAETSLTVP I VID G AR Sbjct: 315 RKHHPAHVEIVPLYARLSAKEQQRIFNPGSKRRIILSTNVAETSLTVPRIHGVIDTGLAR 374 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 +SR+S RT+VQRLPIE ISQASANQRKGRCGR++ GICIRLYSEDDF RP +TDPE+LR Sbjct: 375 MSRFSTRTQVQRLPIERISQASANQRKGRCGRLAAGICIRLYSEDDFNQRPLYTDPEVLR 434 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 T+LA+VIL M AL LGD FPF++AP I++G+RLL+EL + +E LT +G Sbjct: 435 TSLAAVILTMKALKLGDPHKFPFIDAPKPTAIREGIRLLKELDGLDDNEN-----LTDIG 489 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 RQL+ LP+DPRLARM+L A++ C++E +I+ +ALS QDPRE P ++ + + H RF + Sbjct: 490 RQLAHLPLDPRLARMLLAAERFHCLQELLILAAALSTQDPREFPEAEKGGAKQHHARFSE 549 Query: 551 KESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 S+F+ + LW ++ E ++A S R + YL+ LRVREWQDI QL + VKELG Sbjct: 550 PRSEFIGRLRLWRHIEEMAEQARSKTQLRNALKKQYLSPLRVREWQDITHQLTRTVKELG 609 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM 669 + +N P +Y IH ALL GLL ++GMK +K +Y G R F IFPGS LF K PKWV+ Sbjct: 610 LKLNEAPGDYAAIHKALLAGLLGNLGMK-GEKHQYDGVRGLSFHIFPGSELFGKSPKWVV 668 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPI 729 AELVETS+L+ R+ A+I+PEWVE VA HL+K+ +PHWE+ M E+VT++GL + Sbjct: 669 AAELVETSKLYARLLAQIEPEWVEEVAPHLVKKHPFDPHWEKRAAQTMVYERVTLFGLTL 728 Query: 730 VAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDIL 789 + R V Y+ I PA R +FI + LV GD + F++ N L E E LEH++R R L Sbjct: 729 IPKRSVPYAPIAPADARAMFIHNGLVAGDMHSNAPFYQHNRALIEEAEGLEHRTRERGYL 788 Query: 790 VDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYP 849 DD+ LF+F+D + D+ + + D W + R+ P L + ++ ++ + +P Sbjct: 789 ADDQALFDFFDGVLPPDINNLQALDQWRRSAERKNPKALFLPREVVFQQ-RANLDDAQFP 847 Query: 850 NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKS 909 + +L L YQF PG DGVT IPLP+LNQ + F+W +PGL E ++ L K Sbjct: 848 GHITLRDHELALIYQFNPGQGNDGVTTVIPLPVLNQFRTADFQWLVPGLLEEKIVGLFKI 907 Query: 910 LPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHL 969 LPK RR+ VP P A+ ++ + L L R + G + + W W+ +P+HL Sbjct: 908 LPKRYRRHLVPLPQTAKWCAAQLPFNQGTLTALLARLIEPKVGEEIPPDAWQWENLPEHL 967 Query: 970 KITFRVVDDKN-KKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPES 1028 ++ FR+VDD N K L +GR L L++ ++ A+ E+SGL W+F LP Sbjct: 968 QMNFRIVDDSNRKVLAQGRDLALLQEHYAEDARDRFEALPKVSHEKSGLLNWNFDPLPLR 1027 Query: 1029 YEQ-KRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHE 1087 N + +PAL D+ SV I + + + ++ GLRRLLLL + +K + + Sbjct: 1028 MALMTERNRPITCYPALRDDGGSVGIAMAETQEQAQRMHHAGLRRLLLLQVHQQVKMVQK 1087 Query: 1088 KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN----GGPVWTEEGFAALHEKVRA 1143 P + ++ + L+ + D++ N V + F + + RA Sbjct: 1088 NPPISNQALAHYTHLERKEVLVKSLLHAAADRVFFENQGVLPEQVRNQADFQKILAQGRA 1147 Query: 1144 ELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGF 1203 L V + K +++ + LK + T DI+A + L+ +GF+ Sbjct: 1148 HLIPEVEAMGKLLDETFVQFGLLRNALKKPMYPTQQKVAMDIEAHLDKLLGQGFLRTTPP 1207 Query: 1204 KRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKE 1263 + L RYL+A+ RLE+ + +D + + Q+ + + + K + Sbjct: 1208 QWLSHLPRYLKAMLLRLERGRHNSGKDLERQAEYSVWQEKYDRLMEKYQHETHLPAALVL 1267 Query: 1264 IRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 RW +EE RVS FAQ L T P+S KR+ Sbjct: 1268 FRWALEEYRVSLFAQDLKTAIPVSHKRME 1296 >UniRef50_C4LJ32 Putative ATP-dependent helicase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJ32_CORK4 Length = 1409 Score = 1418 bits (3672), Expect = 0.0, Method: Composition-based stats. Identities = 602/1397 (43%), Positives = 826/1397 (59%), Gaps = 112/1397 (8%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 + L +L + D RF RRL +A+++ A + Sbjct: 23 ASNAPSRKELYAQLTEVSAADEHRFRRRLKKA-------RSDRARHAIARDLAAARTQFA 75 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 + A P ITYP +LPVSQ+ DI + IR HQV IVAGETGSGKTTQ+PKIC+ LGRG K Sbjct: 76 AKIATLPTITYPPDLPVSQRVDDIADTIRTHQVTIVAGETGSGKTTQIPKICLALGRGRK 135 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 G+IGHTQPRRLAARTVA RIA E+ + G +GY +RF D V +T +KLMTDGILLAE+ Sbjct: 136 GMIGHTQPRRLAARTVAERIASEVGQDIGQSVGYAIRFDDRVGPSTAIKLMTDGILLAEM 195 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF- 241 Q+DRLL YDTIIIDEAHERSLNIDF+LGY+K LLPRRPDLK+IITSATIDPE+F+RHF Sbjct: 196 QRDRLLRAYDTIIIDEAHERSLNIDFILGYIKRLLPRRPDLKVIITSATIDPEKFARHFA 255 Query: 242 ----NNAPIIEVSGRTYPVEVRYRPI-------VEEADDTERDQLQAIFDAVDELSQESH 290 N APIIEVSGRTYPVE+RYRP + E+D + +A +EL Sbjct: 256 DEEGNPAPIIEVSGRTYPVEIRYRPPYIERERKDGSVERIEKDPQDTVCEACEELMAAGP 315 Query: 291 GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNV 350 GDIL F ER+IR+ DA+ + E+ PL+ RLSN+EQ+RVF H GRRIVLATN+ Sbjct: 316 GDILCFFPSERDIREAHDAIEAKKWPNVEVTPLFGRLSNAEQHRVFSPHRGRRIVLATNI 375 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AETSLTVPGI YV+D GTARISRYS RTKVQRLPIEPISQASANQR GR GR+++GI IR Sbjct: 376 AETSLTVPGIHYVVDTGTARISRYSTRTKVQRLPIEPISQASANQRSGRSGRIAKGIAIR 435 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LYSE+DF SRPEFTDPE+LRTNLASVI+ M +L LGDI FPF++ P+ R I+DG+ +L Sbjct: 436 LYSEEDFDSRPEFTDPEVLRTNLASVIITMASLKLGDINEFPFIDPPEPRAIRDGMMVLH 495 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 ELGA+ E+ + L+ +GR++S++PVDPRLARM++EA V ++ +ALSIQD Sbjct: 496 ELGALGEGERDGSPVLSSIGREISRIPVDPRLARMLVEAHHRDVVEATSVVIAALSIQDV 555 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RERP D + +D+ H RF D +SDF++++ LW YL +K LS NAFR+ CR +YL+Y+R Sbjct: 556 RERPTDHEPQADQAHARFKDTDSDFMSYLRLWAYLTSIKKELSGNAFRKRCRAEYLHYMR 615 Query: 591 VREWQDIYTQLRQVVKELGIPVNSE----------------------------------- 615 VREW D QLR+V ++L + Sbjct: 616 VREWMDFVRQLRRVTEDLSWSWDQNRLTAVIPNDNDESTTPSTKKRSRPNKKAKSQNNNA 675 Query: 616 -------PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWV 668 ++ +H ++L+GLLS IG++ ++EY G R RF IFPGS L KK P+W+ Sbjct: 676 HPDMPMLTVDHDGLHRSILSGLLSQIGLRSDVRKEYQGTRGTRFFIFPGSSLHKKQPQWL 735 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLP 728 M AE+VETSR++ R AA I P WVE A L++ YSEPHW R + A MA ++ T++GLP Sbjct: 736 MAAEIVETSRMFARDAAAIQPRWVEEQASDLLRHQYSEPHWSRRRSAAMAYQRSTLWGLP 795 Query: 729 IVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 +V R ++Y +I+P RE+FIR ALVEGDW TRH FF N A ELE K+RRRD+ Sbjct: 796 VVTDRPISYHRINPREAREIFIRSALVEGDWVTRHKFFHLNRDKLATAGELEEKTRRRDL 855 Query: 789 LVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDY 848 L+DD+TL++FYD RI V + RHFD+WWKK S++ P LL+F+ L+ A IS+ D+ Sbjct: 856 LIDDDTLYDFYDSRIPASVTTGRHFDAWWKKESKKDPHLLDFDPDKLLHPEAHTISEDDF 915 Query: 849 PNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVE-ESGFEWQIPGLRRELVIALI 907 P+ W + L L+Y+FEPG D DGV+V IPLP++ + + F+W +PGLRRELV ALI Sbjct: 916 PDRWRAHSTDLELTYKFEPGEDDDGVSVRIPLPIIGSLSWDDRFDWNVPGLRRELVTALI 975 Query: 908 KSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPD 967 ++LPKP+R VPAP++A + + P E PL DSL LR + G + D+ ++P Sbjct: 976 RTLPKPLRTTVVPAPDFARRAIEMMHPYEQPLTDSLADALRAVGGSGMTSSDFDVAKLPL 1035 Query: 968 HLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAV-------------------- 1007 HL++ F+ +D + + + R L LK + +SA Sbjct: 1036 HLRMNFQAIDRHGRVIDQDRDLDALKKRQSSAATQAMSAAFKRSKVGSALSRGHSHDDGS 1095 Query: 1008 -----------ADDGIEQSG------------LHIWS---FGQLPESYEQKRGNYKVKAW 1041 +SG W+ G LPES + A+ Sbjct: 1096 AQDLPQTQPDSQSSTARRSGEDATTVPDLGKVYAEWTDEGIGTLPESVQTTIDGQPTTAY 1155 Query: 1042 PALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNP 1101 PAL + + + M+ + LL+ +I + LP + ++ + P Sbjct: 1156 PALKVTSKGIEVVTSASQSTANSMMFTAVLTLLVQSIKINENQAVKGLPLQQRVAVEHYP 1215 Query: 1102 YGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILT 1161 +G + L++DC + + +G + E F AL +++ + + + L Sbjct: 1216 HGGLSGLVNDCRVAAIKDALVDHGVIERSPEAFEALKKEMSHTIPAATRRMVVAMAPGLV 1275 Query: 1162 AVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLE 1221 A ++ + +K + DIK Q+ L+ VT G L RY++A+E RLE Sbjct: 1276 AYESMAEEIKK----WDGQAIEDIKRQLNILLPPNAVTRYGTGHLKHLQRYMKAVEIRLE 1331 Query: 1222 KLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLG 1281 + DP RD ++ N+++A++ + LP R + I + ++ELRV FA++LG Sbjct: 1332 NMERDPDRDADGQEEINNLERAFRSKLKGLPQQRANSPAARAIIFSLQELRVQVFAERLG 1391 Query: 1282 TPYPISDKRILQAMEQI 1298 T +S +RI +A+ ++ Sbjct: 1392 TAQKVSPQRITKAINKL 1408 >UniRef50_C5CA12 ATP-dependent helicase HrpA n=5 Tax=Micrococcaceae RepID=C5CA12_MICLC Length = 1367 Score = 1416 bits (3667), Expect = 0.0, Method: Composition-based stats. Identities = 659/1343 (49%), Positives = 858/1343 (63%), Gaps = 119/1343 (8%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 IT+P++LPV++++++I+ AIRDHQVVIVAGETGSGKTTQLPK+C+ LG G G IGHTQP Sbjct: 24 ITFPEHLPVAERREEIMAAIRDHQVVIVAGETGSGKTTQLPKMCLALGLGEAGSIGHTQP 83 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA RIA+EL E G +GY+VRF+ S T VK+MTDGILLAEI D L + Sbjct: 84 RRIAARSVAERIAQELGEEIGQTVGYQVRFTAQTSKATRVKVMTDGILLAEIPHDPQLRR 143 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-------- 242 Y II+DEAHERSLNIDFLLGYL+ LLP+RPDLK+IITSATIDPERF+RHF Sbjct: 144 YSVIIVDEAHERSLNIDFLLGYLRNLLPQRPDLKVIITSATIDPERFARHFGRSLAAGED 203 Query: 243 --------------NAPIIEVSGRTYPVEVRYRPIVEEADDTE-----------RDQLQA 277 APIIEVSGRTYPVE+RYRP+ EE + RD L A Sbjct: 204 HADAVEADDGGRVVPAPIIEVSGRTYPVEIRYRPLTEEPSPDDPEDDADDAAETRDPLDA 263 Query: 278 IFDAVDELSQESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQ 332 I DAV EL+ E GDIL+F+ GEREIR+ AD L + L TEILPL+ RLS +EQ Sbjct: 264 IGDAVLELAAEPPGDILVFLPGEREIREAADHLTGVVAGTTRLAGTEILPLFGRLSMAEQ 323 Query: 333 NRVFQSHS---GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPIS 389 +RVF RRIVLATNVAETSLTVPGIKYVID GTARISRYS+RTKVQRLPIE +S Sbjct: 324 HRVFGRAGAGVRRRIVLATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERVS 383 Query: 390 QASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL---- 445 QASANQR GR GR S+GI IRLYSE+D+LSRPEFTDPEILRT+LASVILQM +LG+ Sbjct: 384 QASANQRAGRSGRTSDGIAIRLYSEEDYLSRPEFTDPEILRTSLASVILQMLSLGVARTP 443 Query: 446 GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARM 505 GD+ FPFV+ PD R + DG L ELGA+ A A +T +GR+L++LPVDPRL RM Sbjct: 444 GDVKEFPFVQPPDGRQVTDGAATLTELGALEAGG-ARAGTITRVGRRLARLPVDPRLGRM 502 Query: 506 VLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL 565 +LEA + GCVRE M+I +AL+IQDPRERP ++++A+DE HRRF D+ SDF A +NLW YL Sbjct: 503 ILEAGERGCVREVMVIAAALTIQDPRERPTEQREAADELHRRFADENSDFSAILNLWAYL 562 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY----RE 621 E+Q+ LS + FR+LCR +++N+LRV+EWQD+ QLRQ+ K++G+ V + P + Sbjct: 563 RERQQELSGSQFRKLCRREHINWLRVQEWQDLVRQLRQLTKDVGLTVEAGPVDPVGRHEA 622 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 +H +LLTGLLS IG D ++EY GAR RF++FPGS LFKK +VM AELVETSRLW Sbjct: 623 VHKSLLTGLLSQIGAYDERRREYAGARGTRFAVFPGSALFKKRHPFVMAAELVETSRLWA 682 Query: 682 RIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQID 741 R ARI+PEW E VA HL+KR Y+EPHW R G+V+A EKVT++G+ ++ R V Y +ID Sbjct: 683 RTVARIEPEWAEEVAGHLVKRAYNEPHWSRRAGSVVAREKVTLFGVTLIPDRSVRYGRID 742 Query: 742 PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQ 801 P L RELFIRHALVEGDW+TRH FF N EV+ LE + RRRD+ + DE LF FYD Sbjct: 743 PELSRELFIRHALVEGDWRTRHRFFARNRAALEEVDALETRLRRRDLRIGDEDLFAFYDA 802 Query: 802 RISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQ----GNL 857 RI DV+S RHFD+WWKK +E PDLL+ + + L+ AE + +P + G++ Sbjct: 803 RIPGDVVSERHFDAWWKKARQEQPDLLDLDVAALLTADAEDLDTDAFPTTFTYPMPGGDV 862 Query: 858 KLRLSYQFEPGADA--DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVR 915 +L L Y F+P A DGVTV +P+ LLNQV F W +PGLR ELV ALIK+LPK VR Sbjct: 863 ELDLEYTFDPTGAAGTDGVTVAVPILLLNQVSPGPFAWLVPGLRVELVTALIKALPKAVR 922 Query: 916 RNFVPAPNYAEAFLGRVKPLELPLL----DSLERELRRMTGVTVDREDWHWDQVPDHLKI 971 +N VPAP+ A+ + ++ PL D+L +RR+ GV V+ W D VP HL++ Sbjct: 923 KNLVPAPDVAQQLVADLEAHADPLRDELPDALSAAVRRVRGVVVEPGLWALDAVPLHLRM 982 Query: 972 TFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSA------------------------- 1006 +RVVD + + G+ L L+ L + ++A Sbjct: 983 DYRVVDARGAVMGAGQDLPALQARLAQANRSAIAARLAGTDDPASARPGPRGTGRGGRAQ 1042 Query: 1007 --------------------VADDGIEQSGLHIWSFGQLPESYEQKRG--NYKVKAWPAL 1044 E+ GL WS G +P++ G + +P+L Sbjct: 1043 TDARAGAEGRRRPEGPGRSDATPAFEERHGLTSWSIGTVPKTVSTAAGARGPAITGYPSL 1102 Query: 1045 V-----DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF 1099 V D + + + + +Q G+ RLLL +PSP +Y+ + L N+ KL Sbjct: 1103 VPETTPDGGPAAGLTVARSADDQAAWHRAGVIRLLLATLPSPQRYVLDHLDNREKLTFTQ 1162 Query: 1100 NPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI 1159 NP+G V L+ DC VD+L+ + E F AL ++VRA+L DTV + VEQ+ Sbjct: 1163 NPHGSVDSLVADCTQAAVDRLV--GDELPFDEAAFRALFDRVRADLIDTVFAVTSLVEQV 1220 Query: 1160 LTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR 1219 L+ + +RLKG V +A LSD+KA + LV+ GFV G++RL RYLQ + R Sbjct: 1221 LSRAAQVRRRLKGSVSPALASALSDVKAHLEQLVFPGFVAATGWERLQHLPRYLQGMLTR 1280 Query: 1220 LEKL--AVDPHRDRAQMLKVENVQQAWQQWINKLP---PARREDEDVKEIRWMIEELRVS 1274 L++L RD M V+ ++ + + +++ +RW+IEELRVS Sbjct: 1281 LDRLDAGGHLQRDGQHMAVVQGLEDEFDAAVAAHRARFAGTPVPAELERVRWLIEELRVS 1340 Query: 1275 YFAQQLGTPYPISDKRILQAMEQ 1297 +FAQ+LGT +S+KR+ QA+ + Sbjct: 1341 FFAQELGTAVSVSEKRVRQALAR 1363 >UniRef50_C7ME24 ATP-dependent helicase HrpA n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7ME24_BRAFD Length = 1297 Score = 1407 bits (3643), Expect = 0.0, Method: Composition-based stats. Identities = 633/1283 (49%), Positives = 843/1283 (65%), Gaps = 55/1283 (4%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGH 127 P +TYP +LPVSQ+++DI AI +HQVV++AG TGSGKTTQ+PK+ +ELG G G IGH Sbjct: 18 PRLTYPGDLPVSQRREDIQAAITEHQVVVIAGATGSGKTTQIPKMLLELGYGQGGKLIGH 77 Query: 128 TQPRRLAARTVANRIAEELKTEPGG-CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AAR+VA RIA E+ + G +GY+VRF+ S T +KLMTDGILLAEI +DR Sbjct: 78 TQPRRIAARSVAQRIAGEMGEKLGEGTVGYQVRFTRETSRGTRLKLMTDGILLAEIGRDR 137 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN---- 242 LL +YD IIIDEAHERSLNID +LGYL+++LP+RPDLKIIITSATIDPERF+ HF Sbjct: 138 LLKRYDAIIIDEAHERSLNIDVILGYLRQILPQRPDLKIIITSATIDPERFAEHFAKVLP 197 Query: 243 -----NAPIIEVSGRTYPVEVRYRPIVEEADD-----------TERDQLQAIFDAVDELS 286 APIIEVSGRTYPVE+RYRP+V E + ERD QAI DAVDELS Sbjct: 198 SGERRPAPIIEVSGRTYPVEIRYRPLVLEPEMEDDDELEDVHSIERDLTQAIIDAVDELS 257 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLR--------HTEILPLYARLSNSEQNRVFQS 338 E GD+L+F+ GEREIR+ ++AL R E+LPL+ RLS +Q ++F Sbjct: 258 AEGPGDMLVFLPGEREIREISEALTTHLSRGTRGRGALPVEVLPLFGRLSAQDQQKIFSP 317 Query: 339 HSG---RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 RR++L+TNVAETSLTVPGI YVID G ARISRYS RTKVQRLPIEPISQASA+Q Sbjct: 318 PKAGTYRRVILSTNVAETSLTVPGITYVIDSGLARISRYSQRTKVQRLPIEPISQASADQ 377 Query: 396 RKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 R GR GR + GI IRLYS++DF RPEFT+PEILRT+LASV+L MT+LGLGD+ AFPFVE Sbjct: 378 RSGRSGRTAPGIAIRLYSQEDFEGRPEFTEPEILRTSLASVVLLMTSLGLGDVEAFPFVE 437 Query: 456 APDKRNIQDGVRLLEELGAI-TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 P R I DGVRLL+ELGAI + +LT +GR L++ P+DPR+ARM++EA + G Sbjct: 438 PPANRAITDGVRLLDELGAIEDAPGEPGGRRLTRIGRSLARFPLDPRMARMLIEADRLGA 497 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 +RE ++I + LSIQDPRERP+ ++Q + EKH+RF D+ SDFLAF+NLWN+L +++K LSS Sbjct: 498 LREVLVIVAGLSIQDPRERPLGQEQQAKEKHKRFEDETSDFLAFLNLWNHLRQRRKELSS 557 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 +AFRR R ++L+YLR+REW D++ QLR + K+ G+ N A + IH +LL GLLSH+ Sbjct: 558 SAFRREVRAEHLHYLRIREWWDLHAQLRDMAKDAGLSRNDNDASPQAIHQSLLAGLLSHV 617 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 G+ D +EY GAR ARF+++PGS L KK P +VMVAELVETSRLWGR AARIDP W E Sbjct: 618 GLLDDRTREYAGARGARFALWPGSALAKKRPDYVMVAELVETSRLWGRTAARIDPAWAEE 677 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 H++KR++S PHW + + MA +KVT+YG+P+VA R V Y +IDP RE+F++HAL Sbjct: 678 TGAHVVKRSHSAPHWSSKRASAMARQKVTLYGVPLVADRVVGYGRIDPEAAREIFLQHAL 737 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 +EGDW+TRH FFR+N L E+EELE K+RRRD+L+ DE LF FYD+RI V+S RHFD Sbjct: 738 IEGDWRTRHHFFRDNRALIQELEELEAKTRRRDLLISDEQLFRFYDERIPRTVVSGRHFD 797 Query: 815 SWWKKVSRETPDLLNFEKSMLI--KEGAEKISKLDYPNFWHQGNLKLRLSYQF-EPGA-D 870 SWWK ETPDLL + L+ E + D+P+ W QG++ L LSY F E GA Sbjct: 798 SWWKTQRHETPDLLTLTEKDLLAADESVAEAIAADFPDSWVQGDITLPLSYAFGEVGAKG 857 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 ADGVT +PL +LN+++ GF+W +PG+R ELV LI+SLPKP+RR+ VPAP A+A Sbjct: 858 ADGVTATVPLAVLNRLQARGFDWLVPGMREELVTELIRSLPKPIRRHLVPAPERAKAVAT 917 Query: 931 RVKPLE----LPLLDSLERELRRMTGV----TVDREDWHWDQVPDHLKITFRVVDDKNKK 982 + + P L+++ EL + GV + ++ ++P HL++ FRVVDDK ++ Sbjct: 918 TLHDDDPDTGEPFLEAVADELVALPGVPDDLPLYGPEFDVAKLPAHLRMHFRVVDDKGRQ 977 Query: 983 LKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWP 1042 + G L+ LK LK +V ++S+ A D + ++ L + +P +E G KV +P Sbjct: 978 IGTGDDLEALKGTLKERVDASVSSQA-DSLARTDLPAFPDEGVPAVHESTVGGLKVTGYP 1036 Query: 1043 ALVDERD------SVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLG 1096 ALV R V + + EQ A G+ LL ++ + + + LP KL Sbjct: 1037 ALVARRGEDGRLQRVDLAVLATADEQALAHREGVIALLDRDLGADLAAVLNALPTPTKLA 1096 Query: 1097 LYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQV 1156 + Y L+ D L A V T+ + AL ++VR + + K Sbjct: 1097 AASSDYASTAALLADASRAATVHL--AGTAEVRTKAQYDALLDRVRRQHDALAAQAVKDA 1154 Query: 1157 EQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAI 1216 L ++K L + + L+ I+ L+ GF++ G + L D RYL+A Sbjct: 1155 AAALAVSGTLHKALSRVPSLAVLSHLTQIREHAASLLGDGFISRTGIEHLPDLRRYLEAD 1214 Query: 1217 EKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYF 1276 RLEKL +P RD ++ +++Q W KL RR + DV+EI W++EELRVS F Sbjct: 1215 AIRLEKLPSNPRRDEQLAWQIGDLEQYWAARKAKLSARRRAEADVREIDWLLEELRVSLF 1274 Query: 1277 AQQLGTPYPISDKRILQAMEQIS 1299 AQ LGT +SDKRI +A+ +I+ Sbjct: 1275 AQTLGTKQTVSDKRIRKAIAEIA 1297 >UniRef50_C8X757 ATP-dependent helicase HrpA n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X757_NAKMY Length = 1349 Score = 1404 bits (3636), Expect = 0.0, Method: Composition-based stats. Identities = 645/1349 (47%), Positives = 856/1349 (63%), Gaps = 56/1349 (4%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + +RL L + DR R RL +++ +P + + E+ +++ A ++ R Sbjct: 4 HQAPDAERTERLADLTIVDRRRLQGRLRSAERIPDPAKRDLVLAEIDHQLEAGAARLARR 63 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 +AA P IT+P LPVS + QD+ I +HQVVIVAGETGSGK+TQLPK+C++LGRG++G+ Sbjct: 64 QAAVPTITFPAQLPVSARVQDLARTIAEHQVVIVAGETGSGKSTQLPKLCLQLGRGVRGM 123 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IGHTQPRR+AAR +A RIAEE T+ GG IGY +RF DH T+VKLMTDGILL EI + Sbjct: 124 IGHTQPRRIAARALAERIAEETGTQLGGAIGYSIRFGDHTGPTTLVKLMTDGILLTEIAR 183 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 DR+L YDTIIIDEAHERSLNIDFLLGYL+ LLP+RPDLK+IITSATIDP +FSRHF +A Sbjct: 184 DRMLWAYDTIIIDEAHERSLNIDFLLGYLQGLLPQRPDLKLIITSATIDPGKFSRHFADA 243 Query: 245 PIIEVSGRTYPVEVRYRP----IVEEADDTE----------RDQLQAIFDAVDELSQESH 290 P++EVSGRT+PVE+RYRP + E DD + DQ QAI AVDEL Sbjct: 244 PVVEVSGRTFPVEIRYRPYGLDALPEVDDPDAEQSRGSSESADQGQAITAAVDELLAAGD 303 Query: 291 GDILIFMSGEREIRDTADALNKLNLRH---TEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 GDIL+F+SGEREI DT + L TE+LPLY RLS+++Q++VF +H GRRIVL+ Sbjct: 304 GDILVFLSGEREITDTTEVLRGHLAGRRGLTEVLPLYGRLSSADQHKVFSAHPGRRIVLS 363 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPGI+YVIDPGTARISRYS R+KVQRLPIEPISQASA QR GRCGRV+ GI Sbjct: 364 TNVAETSLTVPGIRYVIDPGTARISRYSPRSKVQRLPIEPISQASAGQRAGRCGRVANGI 423 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLYSE DF RP +TDPEI RT+LASVILQM AL LGDI FPF++ PD+R I DGV Sbjct: 424 CIRLYSEKDFDERPAYTDPEIARTSLASVILQMAALELGDIVDFPFLDPPDQRQITDGVT 483 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 +L ELGAI +LTP GR+++ LP+DPRLARM++E ++ RE +++ SAL++ Sbjct: 484 VLTELGAIDRSA-GDRVRLTPTGREMADLPLDPRLARMLVEGERRNVRREMLVLVSALAV 542 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 D RE P+D++ + H RF D SDF A ++LW YL EQ K S NAFRR+CR +YLN Sbjct: 543 IDVREYPLDERDKATAAHARFVDGNSDFNALISLWAYLEEQAKTQSGNAFRRMCRREYLN 602 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNSE-------------------------------P 616 YLR+REWQD++ QL Q++ Sbjct: 603 YLRIREWQDLHAQLSQLLDGGRRRGGRRRPDRPAPADRGSLPQRRDPDATQGGRGSLAVD 662 Query: 617 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET 676 + +H ALL GLLSHIG++ +EY G R +SI+PGS L + P V+ AELVET Sbjct: 663 VDTERVHTALLAGLLSHIGLRKEGTREYQGTRGISYSIWPGSALARTGPVLVVAAELVET 722 Query: 677 SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVN 736 SRLW RI AR++P WVE V L++R YSEP W + +V ATEKVT+ G+ ++AAR V Sbjct: 723 SRLWARICARVEPGWVEQVGADLLRRNYSEPRWNGKRASVEATEKVTLLGVTLIAARTVQ 782 Query: 737 YSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLF 796 + +IDP L RELFIRHALVE DWQTRH FF +N + +V E E ++RRRDIL+DD+T+F Sbjct: 783 FDRIDPELSRELFIRHALVERDWQTRHRFFADNQRALEQVTEWEERARRRDILIDDDTMF 842 Query: 797 EFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN 856 YD RI V S RHFDSWWKK SR PDLL MLI GAE+ +P+ + G Sbjct: 843 ALYDARIPPQVTSGRHFDSWWKKASRTQPDLLTLTPDMLIAAGAERFDSAAFPDRFTSGE 902 Query: 857 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 916 ++L L Y F+PG DGVTV IPLP+L +V+ +GFE QIPGLR +L +ALI++LPK +RR Sbjct: 903 VELPLDYVFDPGRADDGVTVSIPLPVLARVDPAGFEAQIPGLRADLAVALIRTLPKTLRR 962 Query: 917 NFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVV 976 NFVPAP++A A L R+ PL + L L RMTGV V D+ D+VP+HL++ FR+V Sbjct: 963 NFVPAPDFARAALDRIDA-ARPLAEELAGALTRMTGVVVRTADFDPDKVPEHLRMNFRIV 1021 Query: 977 DDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNY 1036 D+ + GR L L+ L+ Q + A +E+ GL + +P + + Sbjct: 1022 DEHGATVASGRDLPTLQSTLRTDTQRAV-VQATKSLERHGLTAFPEPGVPRRVRARVAGH 1080 Query: 1037 KVKAWPALVDER-DSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKL 1095 +V +PALV E +V + +FD+ +Q++AM G LL + + + + L + ++ Sbjct: 1081 EVTGYPALVVEGPGTVGVAVFDSEADQRRAMRAGTIELLAAALTPSLTRVRQLLTREQQI 1140 Query: 1096 GLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQ 1155 L P + L+ D VD L+D GGP W+ GFAA+ K+ + +V D+ Sbjct: 1141 TLATAPGTTIPTLVADATRAAVDALLDWAGGPSWSAAGFAAVRTKLTPSMLTSVRDVLAA 1200 Query: 1156 VEQILT----AVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLR 1211 E +L+ A ++ +G +A D++AQ V GF+ G L D R Sbjct: 1201 AETVLSAAGAAARALDTAERGPGAAAVADLTRDMRAQWRAAVAPGFIVATGAAGLPDRAR 1260 Query: 1212 YLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEEL 1271 LQA+ R E++ RDR ++ ++ +Q + + +LP RR D DV+ + ++ E Sbjct: 1261 QLQALRIRAERVREAAGRDRERLAEIRELQAEVDRAVEELPEERRSDPDVQALHHLLAEY 1320 Query: 1272 RVSYFAQQLGTPYPISDKRILQAMEQISG 1300 RV+ FAQ + T P+S KRI A + G Sbjct: 1321 RVALFAQPMRTSVPVSAKRIRSAAAALGG 1349 >UniRef50_C8RTL0 ATP-dependent helicase n=4 Tax=cellular organisms RepID=C8RTL0_CORJE Length = 1325 Score = 1400 bits (3625), Expect = 0.0, Method: Composition-based stats. Identities = 594/1295 (45%), Positives = 823/1295 (63%), Gaps = 72/1295 (5%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 + P I+YP +LPVS++++DI +AI D+QVVI+AGETGSGKTTQ+PK+C+ELGRG +I Sbjct: 40 RSIPPISYP-DLPVSERREDIKQAIEDNQVVIIAGETGSGKTTQIPKMCLELGRGRTKVI 98 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGG---CIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 GHTQPRR+AAR+VA RIAEEL E G +GYK+RF D +S +T VKLMTDG+LL EI Sbjct: 99 GHTQPRRIAARSVAERIAEELDQEIGDDTSLVGYKIRFDDTISKHTAVKLMTDGVLLNEI 158 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 Q+DRLL YDTII+DEAHERSLNIDFLLGYLK+LLP+RPDLK+IITSATIDPE F++HF Sbjct: 159 QRDRLLRDYDTIIVDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSATIDPESFAKHFA 218 Query: 243 NA-----PIIEVSGRTYPVEVRYRPIVEEADDT--------ERDQLQAIFDAVDELSQES 289 +A PIIEVSGRTYPVE+RYRP+V E ++ E D L + A EL + Sbjct: 219 DANGSPAPIIEVSGRTYPVEIRYRPLVTERENPKTGEVIEVETDPLDGLVGACRELMRAG 278 Query: 290 HGDILIFMSGEREIRDTADALNKLNL-----RHTEILPLYARLSNSEQNRVFQSHSGRRI 344 GDIL F SGEREIRD A+AL R ++LPL+ RLSN+EQ+RVF + RRI Sbjct: 279 DGDILCFFSGEREIRDAAEALEGEFAGAGGARKVDVLPLFGRLSNAEQHRVFHTGPRRRI 338 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VLATN+AETSLTVPGI YV+D G ARISRYS RTKVQRLP+EPISQASA QR GR GR++ Sbjct: 339 VLATNIAETSLTVPGIHYVVDTGYARISRYSNRTKVQRLPVEPISQASAKQRSGRSGRIA 398 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 +GI IRLYSE+DF +RPEFTDPEILRT+L+SVIL M ALGLGDI FPF++APD ++I+D Sbjct: 399 DGIAIRLYSEEDFEARPEFTDPEILRTHLSSVILSMAALGLGDIERFPFLQAPDSKSIRD 458 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 GV LL+ELGA+ LTP+GR ++++P DPRLARM++ + + +I SA Sbjct: 459 GVALLQELGAL---ASTKEAALTPIGRDMARIPTDPRLARMLVAGHANNIIEPIAVIVSA 515 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LSIQD RERP++KQQ +DE H RF SDF++ + LWNYL EQ++ LS+N FRRLC+ + Sbjct: 516 LSIQDVRERPLEKQQQADEMHARFK-ANSDFVSLLKLWNYLQEQRQELSANKFRRLCQRE 574 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVN-----------SEPAEYREIHIALLTGLLSH 633 +++Y+RVREW D+ Q+ VV++L + E + +H ++LTGLL+H Sbjct: 575 FIHYVRVREWMDLVRQMLSVVQDLSWKIPNIRHVRELVFEPEAIDEDLVHQSILTGLLTH 634 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 +GM++ + +++TG R + F + P S + KKPP+W+M AELVETS+++ R IDP W+E Sbjct: 635 VGMREGNSKQFTGTRGSHFVVHPSSHVSKKPPQWLMAAELVETSQVFARTVGPIDPSWIE 694 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 +A H++K YSEP W ++GA M EKV + GLPIVA R VN S++D AL RELFIRHA Sbjct: 695 TIAPHMVKYNYSEPVWSSSRGAAMVHEKVLLLGLPIVADRMVNASKVDRALARELFIRHA 754 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 LVEGDW+TRH FF N KL +E ELE K+RRRDI+VDD+TLF+FYD R+ ++S+RHF Sbjct: 755 LVEGDWKTRHHFFAHNQKLLSEATELEDKARRRDIVVDDQTLFDFYDARLPEKIVSSRHF 814 Query: 814 DSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADG 873 DSWWKK + P L+F LI + ++P+ W QG+L+ LSY F PG DG Sbjct: 815 DSWWKKARHKDPHQLDFTLDALIDSEEAAKAADEFPDVWRQGSLEFELSYVFLPGDPDDG 874 Query: 874 VTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK 933 +T+ +P+PLL V E W + G+R EL IALI+SLPKP+R + VPA N+A A L R+ Sbjct: 875 MTMRVPIPLLANVSEPETRWLVAGMREELAIALIRSLPKPLRTSVVPASNFASAALKRMV 934 Query: 934 PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 P + +L LR + G + +D+ W +VP HL++ F +D + +++ R L+ L+ Sbjct: 935 PFDGEFGFALAEALRELGGQGISAQDFDWSRVPGHLRMQFAAIDRRGNVIEKSRDLKYLQ 994 Query: 994 DALKGKVQETLSAVADDG------------------------------IEQSGLHIWSFG 1023 + L G+V ++ A G Sbjct: 995 NKLAGQVTSAIAQAAARSKGAAPSDAAQHTPSRRKASKKQAGTSTGVLATADAWTADGIG 1054 Query: 1024 QLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIK 1083 LPE+ E + +PA+V +D V +K F + + +++ K Sbjct: 1055 VLPETVETVVDGQTLNTYPAIVATQDRVTLKAFPTKQAADGQQFTTVLNMMVAACTVSPK 1114 Query: 1084 YLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRA 1143 + + LP + ++ + P G V L++D ++ ++ G + + + + Sbjct: 1115 QMIKGLPLRQRVAMENTP-GGVDGLVNDVVALACRDMLMKLGPVIRDPDKCDEVVAVAHS 1173 Query: 1144 ELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGF 1203 + V + + AV +++ LKG + D+ AQ+ + + + NG Sbjct: 1174 QGPGRVRQYVVALAPAVLAVADMSAELKG----WSGEAIDDMHAQLNFFLGKHAIARNGI 1229 Query: 1204 KRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKE 1263 + + RY++A+ RLE + DP+++ +V+ + ++ +LP AR +KE Sbjct: 1230 EHMRHVPRYVEAMRARLELMKADPYKEEDLDQEVQEAFELLEKTKKRLPTARAASPQIKE 1289 Query: 1264 IRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +RWMIEELRVS FAQ LGT + +S +RI + +E+I Sbjct: 1290 VRWMIEELRVSLFAQNLGTAHSVSLQRIRKKLEKI 1324 >UniRef50_A0Z814 Helicase, ATP-dependent n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z814_9GAMM Length = 1246 Score = 1396 bits (3615), Expect = 0.0, Method: Composition-based stats. Identities = 545/1234 (44%), Positives = 784/1234 (63%), Gaps = 17/1234 (1%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 I +PD LPV +++++I EAI HQVVI+AGETGSGKTTQ+PKIC+ELGRG + IGHTQ Sbjct: 16 PIKFPDELPVCERREEIREAISQHQVVIIAGETGSGKTTQIPKICLELGRGQEARIGHTQ 75 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAAR VA RIA+EL++E GG +GYKVRF+D V+ +T +KLMTDGILLAE+Q+DR L Sbjct: 76 PRRLAARRVAERIADELESELGGLVGYKVRFNDSVAPSTAIKLMTDGILLAELQRDRELR 135 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 YDT+IIDEAHERSLNIDF+LGYL+ LLP+RPDLK+IITSATID +RFS+HF+NAP+IEV Sbjct: 136 DYDTLIIDEAHERSLNIDFILGYLRALLPKRPDLKVIITSATIDVDRFSQHFDNAPVIEV 195 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA 309 SGR +PVEV Y + A+D DQ+ D + GD+LIF+ GEREIRD + Sbjct: 196 SGRLFPVEVLYLGDSDGAEDGVEDQIVRAVDGIVAEDFGPRGDVLIFLPGEREIRDLSRR 255 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHS-GRRIVLATNVAETSLTVPGIKYVIDPGT 368 L R +ILPLYARLS +EQNRVF+ G R+VLATNVAETSLTVPGI+YVIDPGT Sbjct: 256 LKGDERR--QILPLYARLSAAEQNRVFKPTGSGMRVVLATNVAETSLTVPGIRYVIDPGT 313 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 AR+SRYS+RT++QRLP+E ISQ+SA+QRKGRCGRV+ G+C+RLYSE DFL+RP+FTDPEI Sbjct: 314 ARVSRYSHRTRLQRLPVERISQSSADQRKGRCGRVAAGVCLRLYSEQDFLARPQFTDPEI 373 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 LRTNLA+V+L+M LGLGD+ FPFV+ P+ + ++DG RLLEELGAI+ KLT Sbjct: 374 LRTNLAAVVLKMLELGLGDVQKFPFVDPPEGKMVRDGQRLLEELGAISA-----RGKLTS 428 Query: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548 LGR++++LPVDP+LARMV A + C+ E +++ SAL++QDPR+RP +K+ +D+ H RF Sbjct: 429 LGRKMARLPVDPKLARMVHAAGELKCLEEVLVVVSALAVQDPRDRPAEKRAQADQAHARF 488 Query: 549 HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 + SDFL+++NLWNY EQ+++LS N FR+LC+ ++L+++R+REW+++++QL +++ Sbjct: 489 NHPRSDFLSWLNLWNYYEEQRQSLSQNQFRKLCQREFLSFMRLREWREVHSQLVIACRQV 548 Query: 609 GIPVNS---EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 + + + ++ +H ALL+GLL + D + ++Y RN IFPGS L KKPP Sbjct: 549 QLRPGAALNDETDFEGVHKALLSGLLGQVAQLD-EGRKYNATRNRSVQIFPGSVLHKKPP 607 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVY 725 KW++ AE+VETS+++ R A IDP+W+ + ++KR + EP W+ G VMA E+VT+Y Sbjct: 608 KWLVAAEVVETSQVYARQCAAIDPKWLLRINPQILKRHHYEPAWQMRSGRVMAIERVTLY 667 Query: 726 GLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRR 785 GL I +++++ +++ RE+FIR LV GD++ AF + NL EV++LE ++RR Sbjct: 668 GLTISDGQRIHFGEVNSVAAREIFIRDGLVLGDYRKPPAFLKANLHSIKEVQDLESRTRR 727 Query: 786 RDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISK 845 RD+LVD++ LF+FYD+RI +SA + W K+++ L ++S ++ + Sbjct: 728 RDLLVDEQALFDFYDERIPAQCVSASSLEKWVKQLA--DDKQLRLDQSQILTRDPGEAIA 785 Query: 846 LDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIA 905 +P+ RL Y+FEPG + DG++V +PLPLLN+ FEW +PGL RE IA Sbjct: 786 DQFPSELEWREATYRLKYRFEPGKENDGISVTVPLPLLNRAPRYRFEWLVPGLLREKCIA 845 Query: 906 LIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQV 965 L+K LPK R+ VP P+ +A L ++ ++ L +L LRR GV + EDW + Sbjct: 846 LVKGLPKACRKQLVPVPDVVDAALASMQADDVALCSALSAALRRTRGVAIADEDWDIAGL 905 Query: 966 PDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQL 1025 + + RVVD++ K L +GR + L + + + Q + WSFG L Sbjct: 906 AELYRANIRVVDERGKLLAQGRDMAALVAQFRNGADVERLSEPSNSPAQHQVKSWSFGDL 965 Query: 1026 PESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYL 1085 P + KV+ +PALVD D +A++L D + + G+ L + +KYL Sbjct: 966 PNIWRTTAAGMKVERFPALVDHGDRIAVELHDYQPDAELLHRRGVAALAMSCSSQTVKYL 1025 Query: 1086 HEKLPNKAKLGLYFNPYG-KVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 ++L K L G L+ + I + ++ + E F ++ + Sbjct: 1026 RKQLFADNKASLALAGSGLDRSVLVRETIMASLLEIW--DETLPRDEAAFTRGLNAIKGQ 1083 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 T + + + L + K LK +DI Q+ L+ GF+ N Sbjct: 1084 WVSTALAKEQVMINFLLPLAEAQKHLKQLTKTEFTAARADISGQIQCLLEPGFMVMNPGY 1143 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEI 1264 L RY +A+ R+++L +D+ + +E + P + Sbjct: 1144 WLEQYPRYGKALLHRIQRLNGQTEKDQKSLRLLEPSLTRLSEAAANYPGLSGLSPPALQY 1203 Query: 1265 RWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RWM+EE RVS FAQQLGT P+S KR+ + +++ Sbjct: 1204 RWMLEEFRVSLFAQQLGTRLPVSSKRLDEQWQKV 1237 >UniRef50_D0LBQ9 ATP-dependent helicase HrpA n=2 Tax=Corynebacterineae RepID=D0LBQ9_GORB4 Length = 1324 Score = 1394 bits (3608), Expect = 0.0, Method: Composition-based stats. Identities = 607/1330 (45%), Positives = 830/1330 (62%), Gaps = 46/1330 (3%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIF------QEMAKEIDQ 56 + L+ + +L + D R RRL + P A + + ++ Sbjct: 8 PAHRDDAAELRSSMATLTISDEHRLRRRLDKLVGSDKPTASAGESPDSEPWRRLRADVAA 67 Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 A +V R A+ P +T+P LPVS + +I EAIRDHQVV++AGETGSGKTTQLPKIC+ Sbjct: 68 AHRRVAKRTASVPTLTFPPELPVSAARTEIAEAIRDHQVVVIAGETGSGKTTQLPKICLG 127 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 LGRG++G+IGHTQPRR+AA +VA RIA+E +T G +GY VRF+D S ++++++MTDG Sbjct: 128 LGRGVRGMIGHTQPRRIAASSVARRIADETETTLGDVVGYSVRFTDRSSADSLIRVMTDG 187 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 ILL EI D LL +YDT+IIDEAHERSLNIDF+LGYL+ LLPRRPDLK+IITSATI+PER Sbjct: 188 ILLREIGTDPLLRRYDTLIIDEAHERSLNIDFILGYLRRLLPRRPDLKVIITSATIEPER 247 Query: 237 FSRHF----NNAPIIEVSGRTYPVEVRYRPIVEEADDT-----------ERDQLQAIFDA 281 F+RHF PI+EVSGRTYPV+VRYR + + D Q I A Sbjct: 248 FARHFSTPAGEVPILEVSGRTYPVDVRYRALTLRESPDHGDDLGGGEHADLDLFQGIDAA 307 Query: 282 VDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG 341 +DEL GD+L+F+ ER+IRD AD L + EI+PLYARLS ++Q RVF G Sbjct: 308 IDELWSTGRGDVLVFLPTERDIRDAADTLRRRASAGAEIVPLYARLSVADQQRVFAPSDG 367 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 RRIVLATNVAETS+TVPGI+YV+D GTARISRYS RTKV RLPIEPISQASA QR GRCG Sbjct: 368 RRIVLATNVAETSVTVPGIRYVVDSGTARISRYSTRTKVNRLPIEPISQASARQRAGRCG 427 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 RV+ GICIRLYSE+DF +RP FTDPEILRTNLA+VILQMT+L LGDIA FPFV PD R Sbjct: 428 RVAPGICIRLYSEEDFDARPAFTDPEILRTNLAAVILQMTSLRLGDIADFPFVAPPDPRA 487 Query: 462 IQDGVRLLEELGAIT-TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 I+DG+ +L ELGAI D Q+ +LT +GR +++LPVDPR+ARM++ + GC+ ++ Sbjct: 488 IRDGIAVLTELGAIEMPDGQSGLPRLTAVGRSMARLPVDPRIARMLIAGHELGCLDHLVV 547 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 + +ALS+ D RERP D ++A+D HRRF SDFL+++ LW+YL E++ LS N FRR+ Sbjct: 548 LAAALSLPDVRERPSDHREAADAAHRRFAVPNSDFLSYLELWSYLEEKRTELSGNQFRRM 607 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAD 640 C +YL+YLR+REW+D+ QLR++V L + IH A+L+GLLS+I ++A+ Sbjct: 608 CEREYLHYLRIREWRDLTRQLREIVGNLDWSTARTERDADAIHRAVLSGLLSNIAARNAE 667 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 +E+TGARN IFPGSGL KKPP ++M AE++ETSRL+ A IDP W E +A L Sbjct: 668 GREFTGARNTTLMIFPGSGLAKKPPSFLMAAEILETSRLFAHTVAGIDPLWAEKLAGPLA 727 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 KRTYSEPHW +GA MA E+VT+YG+P+VA R+V+Y +IDP RELF+RHALVEGDW Sbjct: 728 KRTYSEPHWSARRGAAMAYERVTLYGVPLVARRRVDYGRIDPETSRELFLRHALVEGDWH 787 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 T+HAFF N L ++EHK RR+ +++ ++ LF+FYDQR+ +V SARHFD+WWKK Sbjct: 788 TQHAFFARNRALLEAAADVEHKVRRKGLVITEDQLFDFYDQRVGAEVTSARHFDTWWKKT 847 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 R PDLL+ ++ + A ++ D+P W QG+ + L Y+F+P A DGVTV IP Sbjct: 848 RRTQPDLLDLTPDDVVTDIA--VADTDFPGAWQQGDTRFELRYRFDPTAADDGVTVVIPE 905 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLL 940 PLL V +GF+W +PG R EL AL+K+LPK +R++ PA +A+ L R+ P P++ Sbjct: 906 PLLAHVRSAGFDWSVPGFRSELATALVKTLPKHLRKSMSPAQRFADLALSRLTPRAEPII 965 Query: 941 DSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKV 1000 L REL +T +TV D+ D++P HL++ F + D + + SL DL+ Sbjct: 966 TGLSRELSAITSMTVSAGDFDTDRLPAHLRVHFALADASGRIVDTDDSLADLQHRHSD-- 1023 Query: 1001 QETLSAVADDGIEQSGLHIWS---FGQLPESYEQKRGNYKVKAWPALVDERD------SV 1051 + ++ W+ G L + + ++ +PAL D V Sbjct: 1024 -----TDSHRAPQRQVYTAWTSDGIGTLGDHTRMRVAGQQLTRYPALESVLDAQGRARGV 1078 Query: 1052 AIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDD 1111 NP + + + + LL + IP K + L +L L +PY +L D Sbjct: 1079 TRTDASNPESRDRLVGGAVTTLLEIAIPPLTKKIVGGLDAGGRLALSQSPYRHGEDLFAD 1138 Query: 1112 CISCGVDKLIDANGGP--VWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKR 1169 C + L + T E F AL +++R ++ + L AV + Sbjct: 1139 CTRRAIRDLAAQRPAIAAIRTPEDFHALRDELRPLVSTAAPEYFALAVDALRAVAPLRTL 1198 Query: 1170 LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHR 1229 + D+ Q+ L++ GFV + L + RYL + RLE L R Sbjct: 1199 IDRHAGSV---AADDVAEQLDHLIFDGFVRATPRRHLAELGRYLLGAQTRLEGLPASADR 1255 Query: 1230 DRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDK 1289 DRA + ++ V Q W Q + ++P RR D +E +W++EELRV FAQ+LGT YP+S+K Sbjct: 1256 DRAGVAIIDRVTQRWNQRLAQVPENRR-DAVNEEAQWLVEELRVGVFAQRLGTAYPVSEK 1314 Query: 1290 RILQAMEQIS 1299 R L+ ++++ Sbjct: 1315 RALRTLDRLG 1324 >UniRef50_B8FCF5 ATP-dependent helicase HrpA n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCF5_DESAA Length = 1357 Score = 1392 bits (3605), Expect = 0.0, Method: Composition-based stats. Identities = 507/1326 (38%), Positives = 758/1326 (57%), Gaps = 36/1326 (2%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVK-NPDAQQAIFQEMAKEIDQAAG 59 + + K +++ RL M RDR R+L ++ K + D + + ++ + Sbjct: 38 LVRKNKRKEQSIRSRLPKAMGRDRHAILRQLDRLRSPKISLDKKSKTLSALQNQVAFSLK 97 Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + LRE +RP YP+ LP+S + ++I+EAI+++QVV++ GETGSGKTTQ+PK+C+ GR Sbjct: 98 ERKLREKSRPSFAYPEELPISGRSEEIVEAIQENQVVVITGETGSGKTTQIPKMCLAAGR 157 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDH--VSDNTMVKLMTDGI 177 G+ GLIG TQPRR+AA TVA RIAEEL + G +GYK+RF + S+ +K+MTDG+ Sbjct: 158 GVDGLIGCTQPRRVAAVTVAQRIAEELGEDLGKSVGYKIRFKETGGKSEAPFIKIMTDGV 217 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE Q D +YDTII+DEAHERSLNIDF+LG LK LLP+RPDLK+IITSATID E+F Sbjct: 218 LLAEFQHDPFFTKYDTIIVDEAHERSLNIDFILGILKNLLPKRPDLKVIITSATIDTEKF 277 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD-TERDQLQAIFDAVDEL-SQESHGDILI 295 S+ FN+API+EVSGR YPVEVRY P++ D+ ++ + AV+ + S+ GDIL+ Sbjct: 278 SKAFNDAPIVEVSGRMYPVEVRYEPLLTSGDENSDAGYVDGAVRAVETIFSRRPKGDILV 337 Query: 296 FMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 FM E +IR+T D L + ILPL+ RL+ EQ RVF HSG ++V+ATNVAETS+ Sbjct: 338 FMPTESDIRETCDLLQARRFPNALILPLFGRLAGGEQARVFARHSGIKVVVATNVAETSI 397 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+PGI+YV+D G ARISRYS RT LP++ IS++SA+QR GRCGRV+EGICIRLY E+ Sbjct: 398 TIPGIRYVVDTGLARISRYSPRTGTTSLPVDKISKSSADQRMGRCGRVAEGICIRLYDEE 457 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA- 474 D+ SRP+FT PEILR NLA VIL+M A L ++ FPFV+ PD R+I+DG +L ELGA Sbjct: 458 DYESRPQFTLPEILRANLAEVILRMVASRLPEVHNFPFVDPPDPRSIRDGFNVLRELGAL 517 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + + +Y LTP GR +++LPVDPR++ +++EA GC+ EA+II SAL I DPRERP Sbjct: 518 LDPRQGEKSYTLTPKGRTMARLPVDPRISAILIEAHPRGCLAEALIIASALCIIDPRERP 577 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYL-GEQQKALSSNAFRRLCRTDYLNYLRVRE 593 +K +D+ HR F SDFL ++NLW K S N ++ ++L+Y R+RE Sbjct: 578 AEKAVQADQAHRTFAHGSSDFLFYLNLWQAYFQHMDKVKSGNQMKKWSIANFLSYKRMRE 637 Query: 594 WQDIYTQLRQVVKELGIPVNS-----------EPAEYREIHIALLTGLLSHIGMKDADKQ 642 W+D++ QL ++ + G N+ E Y +H ++ + LS + K DK Sbjct: 638 WRDVHQQLTAILIDEGFIKNTLPMPKPFEPGMEDCRYEPLHQSIASAYLSQVASK-KDKN 696 Query: 643 EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 Y G + +FPGS LF +W++ A++V TSRL+ R+AA I PEW+E A L+ R Sbjct: 697 IYQGTKGREVMLFPGSFLFNHGGQWIVSAQMVHTSRLFARMAANILPEWLEEPAGPLLSR 756 Query: 703 TYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTR 762 TY EPH+E+ +G V+A E+V++ GL I+A R +Y I+P ELFI+ ALVE + Sbjct: 757 TYLEPHFEKNRGEVIAKEQVSLMGLIIIAGRPTSYGPINPQEATELFIQGALVECQTNEK 816 Query: 763 HAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSR 822 F N K+ E ++E + RRRD++VD+ + FY+QR+ V S + K Sbjct: 817 FGFLAHNQKVLNEARDMEERLRRRDLVVDELGISRFYEQRL-DTVYSIQSLKKIIKDKGG 875 Query: 823 ETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPL 882 ++ L + + ++ E YPN K +L Y+F+PG DGVT+ IP PL Sbjct: 876 DS--FLRMDVTDVMVRSPEAEDLSQYPNRLKVDGAKFKLQYRFDPGRPGDGVTIKIPQPL 933 Query: 883 LNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL-PLLD 941 ++ V EW +PGL E V A+IK LPKP+R VP + + ++ + + Sbjct: 934 VSSVPPEPLEWVVPGLLPEKVTAMIKGLPKPLRVKLVPVNKTVDRVMDKLDKYKHLSMGA 993 Query: 942 SLERELRRMTGVTVDREDWH-WDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKV 1000 +L + + + W +P HL V D K + ++ GR +++L ++ Sbjct: 994 ALSHAIHETMDIEIPAISWPGPSDLPPHLTARLAVTDSKGRVVRFGRDVRELAQSMGEVK 1053 Query: 1001 QETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 E++G+ W FG LP S K+G A+ L D V +K+ ++ + Sbjct: 1054 DLGHLEKLRKQWEKTGIKSWDFGDLPSSIPVKKG--APPAYVCLCPGDDCVDLKIVEDKV 1111 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 + + G+ L L IK++ + L K + +G ++ +++ Sbjct: 1112 KAQATHKKGVAALCTLECAKDIKHIKKYLALKGNAAKHAAYFGGTKQMEQVLFDTLLERT 1171 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL-----KGRVD 1175 ++ + TEE F + L + + +I+ A + R+ + R + Sbjct: 1172 LEKE---LHTEEEFREHVKTRIPALVAQGEKLVESTSRIMEAFHKTSFRISELEAQCRNN 1228 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 L +++ M L+ F RL RYLQA+ R E+ +D +D+A+ Sbjct: 1229 KFGLAFLKNLRTAMTQLLPPNFPNLYDDARLAHMPRYLQAVTIRAERGLLDLDKDKAKAA 1288 Query: 1236 KVENVQQAWQQWINKL--PPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQ 1293 +V + ++ +L + + V++ WMIEE +VS FAQ+L TP PIS KR+ + Sbjct: 1289 QVREFEDHLRRLAKELGIKTTPEKRQAVEDFFWMIEEFKVSVFAQELKTPMPISPKRLQK 1348 Query: 1294 AMEQIS 1299 + +I Sbjct: 1349 RLSEIE 1354 >UniRef50_B8KHJ8 ATP-dependent helicase HrpA n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHJ8_9GAMM Length = 1254 Score = 1381 bits (3574), Expect = 0.0, Method: Composition-based stats. Identities = 558/1250 (44%), Positives = 788/1250 (63%), Gaps = 18/1250 (1%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 + A P ++YP +LPV++ +Q+I +A+R+HQVVIVAGETGSGKTTQLPKIC+E Sbjct: 4 SDVDSPQPLRAIPPLSYPSDLPVAEHRQEIADALREHQVVIVAGETGSGKTTQLPKICLE 63 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 LGRG IGHTQPRRLAARTVA RIAEE+ G +GY+VRF + + D T VKLMTDG Sbjct: 64 LGRGRLQRIGHTQPRRLAARTVAQRIAEEVGQPLGELVGYQVRFQEILGDRTAVKLMTDG 123 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 ILL+E+Q+DR L QYDT+IIDEAHERSLNIDF+LGYLK LLPRRPDLK+++TSATID R Sbjct: 124 ILLSEMQRDRDLRQYDTLIIDEAHERSLNIDFILGYLKRLLPRRPDLKVLVTSATIDVGR 183 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIF 296 FS HFN AP+IEVSGR+YPV Y P + Q+ ++ V + GD+L+F Sbjct: 184 FSEHFNGAPVIEVSGRSYPVTTHYLPRDSSNSEDLLRQVASVVKEVQAGIHGTPGDMLVF 243 Query: 297 MSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGR--RIVLATNVAETS 354 +SGER+IRD A L ++LPLYARLS EQ RVF S R R+VL+TNVAETS Sbjct: 244 LSGERDIRDVARQLRGA--AGLDVLPLYARLSQGEQARVFGRGSARGLRVVLSTNVAETS 301 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 +TVPGI++VIDPG ARISRYSYRT+VQRLPIEP+S+ASA+QR+GRCGRV GIC+RLY+E Sbjct: 302 VTVPGIRFVIDPGEARISRYSYRTRVQRLPIEPVSRASADQRRGRCGRVGPGICLRLYTE 361 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 +D+L+RP+FTDPEI R+NLA+V+LQM LGLGDI FPF+E PD R I+DG RLL+ELGA Sbjct: 362 EDYLNRPQFTDPEIKRSNLAAVVLQMLQLGLGDITKFPFLEPPDSRLIRDGYRLLDELGA 421 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + EQ LT LGR+++ P+DP L+RMVL AQ+ + E ++I SALSIQDPRERP Sbjct: 422 VNQREQ-----LTRLGRRMAAFPIDPSLSRMVLAAQEFSVLPEMLVIASALSIQDPRERP 476 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 D+Q +D+ H RF D SDF++ +NLW Y EQ++ LS N R+LC+ +YL++LR+REW Sbjct: 477 ADRQAQADQSHARFADPRSDFMSLLNLWRYYEEQRQTLSENKLRKLCKREYLSWLRMREW 536 Query: 595 QDIYTQLRQVVKELGIPVNSE---PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 +D++ Q+ + G+ E +Y +H ALL+GLL +I +++EY RN R Sbjct: 537 RDVHRQISIACRSQGLKPALELAPETDYAGVHRALLSGLLGNIAQ-QDERREYLATRNRR 595 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 +FPGS +++KPPKW++ E+VET R++ R AA I+P+W+ V L+K Y EP W+R Sbjct: 596 LQLFPGSVVYRKPPKWLVAGEIVETQRVYARTAASIEPQWLMQVNPALLKHQYYEPRWQR 655 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLK 771 QG V+A K T++GL I V+Y++IDPALCREL IR AL+ G W AF + NL+ Sbjct: 656 EQGRVVAWRKTTLFGLTISDRVAVHYAKIDPALCRELLIREALIAGRWTKPPAFLKHNLR 715 Query: 772 LRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFE 831 L+ EVE+LE ++RRRD+LVD++TLF+FYD+ + + +W K+ S L Sbjct: 716 LQREVEDLESRARRRDLLVDEDTLFQFYDELLPTHATNTTSLVAWIKEDSNRG-TALKLR 774 Query: 832 KSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGF 891 + L+ ++ +P+ + RLSYQF PG +ADGV++ +P+ LLN++ Sbjct: 775 RDQLLTRDPGALT-DAFPDRLEWEDQSYRLSYQFSPGKEADGVSITVPVALLNRLPRFRL 833 Query: 892 EWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMT 951 +W +PG+ RE IAL+K LPKP+R+ VP P++ + L ++P ++PL ++L L++ Sbjct: 834 QWLVPGVLREKCIALLKGLPKPLRKQLVPVPDWVDRALQYMQPTDVPLTEALGGALKQAG 893 Query: 952 GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDG 1011 G + DW + V D+ ++ RVVDDK K L + R + L + ++ L+ + Sbjct: 894 GPLIAASDW-PEIVDDYYRMNLRVVDDKGKLLAQHRDVDALIKEFEEATRQQLTTEDGNS 952 Query: 1012 IEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLR 1071 ++GL +W F +L Y K+ + A+PALVD ++SV+I+LFD P E A GL Sbjct: 953 PARTGLLLWDFPRLEREYGFKQAGVDILAYPALVDAQNSVSIELFDYPGEALLAHRRGLA 1012 Query: 1072 RLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG-KVLELIDDCISCGVDKLIDANGGPVWT 1130 RLL+L+ + ++ L F +L+D+ + + G Sbjct: 1013 RLLMLSSKPLFRDFRKRFLKDNATALLFVALDVSRDDLLDELLPTLALNAGEVLDGDCRD 1072 Query: 1131 EEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMG 1190 ++ F ++ D Q++ L A+ + + L+ D A +DI AQ Sbjct: 1073 KDQFETASRQMSRTAVGLGNDYEAQLKNTLAAMADAVRILQRYTD-QYAQAKADITAQRS 1131 Query: 1191 GLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINK 1250 L+ RG + G L RY +A+ R E+LA + +D+ + +++ + + Sbjct: 1132 FLLSRGGLFGLASDELRHFPRYAKAMAVRAERLAANYRKDQEHQATLASLEAPMFELLAA 1191 Query: 1251 LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 P A + + + M++ELRVS FAQ LGT P+S KR+ + Sbjct: 1192 QPGAAQLSPSLHTFQIMLQELRVSLFAQHLGTSRPVSVKRLTAQWALVDA 1241 >UniRef50_D0WKL4 ATP-dependent helicase HrpA n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WKL4_9ACTO Length = 1331 Score = 1374 bits (3557), Expect = 0.0, Method: Composition-based stats. Identities = 602/1340 (44%), Positives = 797/1340 (59%), Gaps = 113/1340 (8%) Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 + R+ + P I YP +LPVS ++ +I AIRD+QVV+VAGETGSGKTTQLPKIC+ELGRG Sbjct: 1 MEARKRSVPNIAYP-DLPVSARRDEIARAIRDNQVVVVAGETGSGKTTQLPKICLELGRG 59 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 +IGHTQPRR+AAR VA+R+A EL + G +GY+VRF++ VS T+VKLMTDGILLA Sbjct: 60 TSAMIGHTQPRRIAARAVADRLAHELGVDLGAQVGYQVRFTEEVSPGTLVKLMTDGILLA 119 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EIQ D L +YDTIIIDEAHERSLNIDFLLGYL LLPRRPDLK+IITSATID +RF++H Sbjct: 120 EIQSDPELARYDTIIIDEAHERSLNIDFLLGYLARLLPRRPDLKVIITSATIDTQRFAKH 179 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 F NAP++EVSGRTYPVE+RYRP+V + DQ+ I +A +EL E GDIL+F+SGE Sbjct: 180 F-NAPVVEVSGRTYPVEIRYRPLVGDDGGEATDQVSGIVEACEELMAEGPGDILVFLSGE 238 Query: 301 REIRDTADAL-------------NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 EIRD A E+LPLY+RLS +EQ+R+F+ RRI+LA Sbjct: 239 GEIRDAQAAFADELGRRHIEPGGRSSVPDAVEVLPLYSRLSAAEQHRIFERRPHRRIILA 298 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETSLTVPGI+YV+DPGTARISRYS RTKVQRLPIEPISQASANQR GR GRV++GI Sbjct: 299 TNIAETSLTVPGIRYVVDPGTARISRYSARTKVQRLPIEPISQASANQRAGRSGRVADGI 358 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLYS++DF R +FT PEI RT+LASVILQM ALGLG++A FPF++ P++R ++ G + Sbjct: 359 CIRLYSQEDFDGREKFTQPEIQRTSLASVILQMLALGLGNVADFPFIDPPEERAVRAGAQ 418 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL E+GAI +LTP+GR+L++LP+DPRL RM+LEA K+GC E +++ +ALS+ Sbjct: 419 LLTEIGAID------GARLTPVGRRLARLPIDPRLGRMLLEADKNGCASEVLVLVAALSV 472 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 QD RERP +K+ +D+ H RF + SDFLA++ LW YL Q++ LS +AFRR+CR ++LN Sbjct: 473 QDVRERPAEKRPQADQLHARFTARSSDFLAYLTLWRYLNTQRRELSGSAFRRMCRAEFLN 532 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNS--------------------------------- 614 YLR REW D+ QLRQ+ K LGI S Sbjct: 533 YLRFREWADVVAQLRQLAKPLGIDAASIGLPGRAQIRQAGENGAPALGGAPNSGAAAAAC 592 Query: 615 -------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKW 667 + E IH ++L GLLS++G ++Y GAR A F I+PGSGL K+ P W Sbjct: 593 RDFGRGADTPEAGAIHRSMLVGLLSNLGNYSQRSRDYEGARGAHFVIWPGSGLSKRTPAW 652 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 VM AELVETSRL+ R A I+P+W+EP+A++L+KRTYSEP W GA M EKVT+YG+ Sbjct: 653 VMAAELVETSRLFARTVAAIEPQWIEPLAKNLVKRTYSEPFWSSRNGAAMCKEKVTLYGM 712 Query: 728 PIVAARKVNYS----QIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKS 783 + A R V + + RE+FI H LVEGDW+T HAF ++N + E ELE K Sbjct: 713 TLAADRPVLLASTGSESAREEAREMFILHGLVEGDWRTHHAFLKDNERALEEARELEEKM 772 Query: 784 RRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKI 843 RRR ++ E L FYD+RI V+S RHFDSWWKK R+ P LL+F + +L+ E + Sbjct: 773 RRRGLVAGPEALAAFYDERIPDFVVSGRHFDSWWKKAKRDDPHLLDFTQELLVGE--AEA 830 Query: 844 SKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELV 903 + DYP W QG ++L + Y F PGA ADGVTV IP+ LL QV GF+W +PG+R +LV Sbjct: 831 DENDYPAEWRQGEIRLPIEYSFSPGAYADGVTVTIPVTLLPQVRPEGFDWLVPGMREDLV 890 Query: 904 IALIKSLPKPVRRNFVPAPNYAEAFLGRVK---------PLELPLLDSLERELRRMTGVT 954 I++LPK VRR VPAP+ A L + + + R+ G Sbjct: 891 TGTIRALPKRVRRQLVPAPDVARQILPLLPRWEDVAHGQEGAPSFRRAFAEAVFRLRGFW 950 Query: 955 VDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ 1014 +D W ++P+HL + FRV ++ L E SL+ LK L + + + +V + Q Sbjct: 951 IDDAAWEEARLPEHLSVLFRVRSERGAVLDESTSLERLKLELAPRTRSAVESVVKGAVAQ 1010 Query: 1015 S-------------------------GLHIWSFGQLPESYEQKRG-NYKVKAWPALVDER 1048 + G S G +P S E V+ +PAL Sbjct: 1011 ALDEAHFRLAGGAAEGAALPLGESLGGWPDASGGVIPTSVETTGAHGMTVRGYPALAAGA 1070 Query: 1049 DS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 D V + + +P Q + GL LL I P + + P L L +PY Sbjct: 1071 DGKVRLDVLADPALQAREHRRGLAALLAAAIALPETRITSRWPGAQALALAGSPYPDTSA 1130 Query: 1108 LIDDCISCGVDKLIDA-------NGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQIL 1160 L+ D L + V T + L + D V I+ V I Sbjct: 1131 LVADIQLASARNLAAKWAAENGLDVADVRTRSQWDELRAWAKQRHEDEVYRISLDVAGIC 1190 Query: 1161 TAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRL 1220 ++K + + L+D+K Q+ LV GFV+ RL RYL+A R+ Sbjct: 1191 ARRAEVDKWITESRSPALLATLADVKEQVANLVPSGFVSRTPAARLPHIERYLRAAYIRI 1250 Query: 1221 EKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRED---EDVKEIRWMIEELRVSYFA 1277 +K A +P D A ++++V + + + E RWM+EELRVS FA Sbjct: 1251 QKAATNPSGDDALAWQIQDVNDKVEAARAAAASRAYDPSAAAALDEARWMVEELRVSLFA 1310 Query: 1278 QQLGTPYPISDKRILQAMEQ 1297 QQLGT +S KRI + + + Sbjct: 1311 QQLGTNGKVSAKRIAKVLAR 1330 >UniRef50_A5EVC9 ATP-dependent helicase HrpA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVC9_DICNV Length = 1302 Score = 1374 bits (3556), Expect = 0.0, Method: Composition-based stats. Identities = 539/1311 (41%), Positives = 775/1311 (59%), Gaps = 50/1311 (3%) Query: 11 ALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQ-QAIFQEMAKEIDQAAGKVLLREAARP 69 A++ ++++ +DR + +K+ +A+ ++ + ++ + R+ P Sbjct: 4 AIRYDFNTVLCQDRHALKTLFYRLKRQTRQGFNTEALQAQLNERYQKSQERYRHRQENLP 63 Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 + ++LPV +K+ I E I HQVVI++GETGSGKTTQLP+IC+ELG G G I HTQ Sbjct: 64 RPHFQNDLPVLAQKERIKELIAQHQVVIISGETGSGKTTQLPQICLELGLGAGGQIAHTQ 123 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AAR+VA RIAEEL G +GY+VRF + S +T++KLMTDG+LLAE D L Sbjct: 124 PRRIAARSVAARIAEELSVPLGAAVGYQVRFDEQCSPDTVIKLMTDGLLLAETLTDPYLY 183 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 QY+ IIIDEAHERSLNIDFLLGYL LL +R DLK+IITSATID E+F+RHF+ AP I V Sbjct: 184 QYEVIIIDEAHERSLNIDFLLGYLHRLLEKRRDLKLIITSATIDAEKFARHFHQAPQINV 243 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA 309 SGRTYPVE+RYR + D + I A+DEL E GDIL+F+ ER+IR+TA Sbjct: 244 SGRTYPVEIRYREPPA-----DSDLSEEILAAIDELDCEQRGDILVFLPTERDIRETATF 298 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTA 369 L++ L T+ILPL+ RLS ++Q VF+ + RRIVLATNVAETSLTVP IKYVID GTA Sbjct: 299 LSRAQLPATDILPLFGRLSLADQQAVFRPKNQRRIVLATNVAETSLTVPRIKYVIDTGTA 358 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 R+SRYS RTK QRLPIE ISQASANQR GRCGR+S G+CIRLYSE+DF +RPEFT+PEIL Sbjct: 359 RMSRYSLRTKTQRLPIEAISQASANQRAGRCGRLSAGVCIRLYSEEDFQNRPEFTEPEIL 418 Query: 430 RTNLASVILQMTALGL----GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 RTNLA+VILQM L L DIA FPFV+ P+ R I DG RLL EL A+ + Sbjct: 419 RTNLAAVILQMLLLNLAQNGDDIARFPFVDPPEMRQINDGYRLLFELKAVDNHN-----R 473 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT LGR++++LP+DPR AR+V A++H C+ E +I+ +ALSIQDPRERP DK+Q +D +H Sbjct: 474 LTDLGRKIARLPIDPRFARIVFAAEEHACLHETLIVLAALSIQDPRERPFDKEQHADMRH 533 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 R F DK SDF +NL+ +Q++ LS+N R C++ +LN R++EW+ + QL + V Sbjct: 534 REFADKTSDFQTLLNLFAVYQKQRRQLSNNKLRAWCKSYFLNAARMQEWRALVNQLLRDV 593 Query: 606 KELGIPVNS-------------------EPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 + + +N E +H +LL G L +G+ D +EY G Sbjct: 594 HQQKLTINDYRPRPVISNETGEKGGLALENPNLMGLHRSLLAGFLDQVGLWDEQNKEYAG 653 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSE 706 R +FS+FP S L K P+ VM A ++E +R++ R+ A I+ +E +A HL K S Sbjct: 654 PRQRKFSLFPASVLAKARPQAVMAAHIMELNRVYARMCAPIELHELEQLAAHLTKTQLSA 713 Query: 707 PHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFF 766 PHW + G V+A E V +YGLPIVA RK + D E+FIR ALV G+ TR Sbjct: 714 PHWSKRAGNVLAEETVLLYGLPIVAGRKKPLATQDRDSAHEIFIREALVSGEINTRLTVI 773 Query: 767 RENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPD 826 N LRA++E LE K+R R I+VD+E + +FY QR+ V S + W KK Sbjct: 774 ARNQALRAQLETLEDKTRSRGIVVDEEQVADFYLQRLPVTVYSTVTLEQWAKKYHEHD-- 831 Query: 827 LLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQV 886 L ++ L+ + +SK DYP + L Y F+P DG+TV +PL LN V Sbjct: 832 -LLMTEADLLMQEVA-VSKRDYPENLAIRGYQFPLKYVFDPTQSDDGITVLLPLTALNAV 889 Query: 887 EESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERE 946 + FE +P + +E + +++ LPK RR VP P++A+A R+ E PL+ +L Sbjct: 890 CAADFERLVPAMLQEKIEMILRRLPKMWRRQMVPIPDFAQALYERIVETETPLIPALISG 949 Query: 947 LRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSA 1006 + M G+ + + + +++ DH ++ FR++D K + + EGR L+ L+ + Sbjct: 950 IDAMKGLKIPEDAFDQEKIDDHYRMNFRLLDAKKQVIAEGRDLEALQKQYAAEASLQFQK 1009 Query: 1007 VADDGIEQSGL-HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQA 1065 + + + W + LP S E+ RG + +PAL E + ++L D+P ++A Sbjct: 1010 RSHSQLASDEIVTDWLWENLP-SQEKMRGG--IIGYPALTLEDGQLYLRLHDDPERAERA 1066 Query: 1066 MWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANG 1125 G+R LL+ + S IKYLH+ LP K ++ L++ + L+DD IS V+++ Sbjct: 1067 HRVGVRFLLMQKLSSQIKYLHKNLPYKTQMSLHYRKISSDIYLLDDIISALVEQVCL-TA 1125 Query: 1126 GPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDI 1185 T++ F+A + +L +A + +L IN+ L+ +DI Sbjct: 1126 ALPRTQKDFSAALLQGEKKLVAGGQQLAAVLVDLLAQYSRINEALRSTKP---VDAKNDI 1182 Query: 1186 KAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQ 1245 + Q+ LV+ F+ L D RYL A+E RL+KLA DP +D + + ++ Sbjct: 1183 ERQLARLVFPSFIRLTERAYLNDIARYLHAVELRLQKLARDPQKDAQRQKIIAPWEEKLS 1242 Query: 1246 QWINK----LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 + + P + ++ +++EE R+ FAQ+LGT +S+K++ Sbjct: 1243 AKMQQCAVTYPLTANTPKTLQRFFYLLEEFRIQVFAQELGTKEKVSEKQLQ 1293 >UniRef50_A4SYB1 ATP-dependent helicase HrpA n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYB1_POLSQ Length = 1330 Score = 1371 bits (3549), Expect = 0.0, Method: Composition-based stats. Identities = 565/1326 (42%), Positives = 798/1326 (60%), Gaps = 96/1326 (7%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI---K 122 + EI +P+ LPVS ++Q I +A++ HQVVIV GETGSGKTTQLPKIC++LGRG Sbjct: 7 RRKLEIRFPEELPVSGQRQIIKDALQSHQVVIVCGETGSGKTTQLPKICLDLGRGTINGG 66 Query: 123 GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 LIGHTQPRR+AA A RIA+EL + G +GY+VRF+D S + +KLMTDGILLAE Sbjct: 67 KLIGHTQPRRIAATATAKRIAQELGSPIGQDVGYQVRFADKTSHSASIKLMTDGILLAET 126 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF- 241 Q+D L YDT+IIDEAHERSLNIDFLLGYL++LLP+RPDLK+IITSATID +RF+ HF Sbjct: 127 QRDPQLRAYDTLIIDEAHERSLNIDFLLGYLRQLLPKRPDLKLIITSATIDAQRFAEHFA 186 Query: 242 ---NNAPIIEVSGRTYPVEVRYRPIVEEADDT-------ERDQLQAIFDAVDELSQES-- 289 AP+IEVSGR +PVE RY P+ +A ++ A+ + + L +E Sbjct: 187 INGKVAPVIEVSGRLFPVEQRYSPLEPDAKPDGKKASKAAKEISDAVTEEIASLWREGAA 246 Query: 290 -HGDILIFMSGEREIRDTADALNK----LNLRHTEILPLYARLSNSEQNRVFQSHSGRRI 344 GD+L+F+ GEREIRD A+AL K H EIL L+AR S +EQ RVF +GRRI Sbjct: 247 GSGDVLVFLPGEREIRDCAEALRKDHVLQQRFHPEILSLFARQSVAEQERVFSPGNGRRI 306 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 +L TNVAETSLTVP I+YVID G AR+ RYSYR KV++L IE ISQA+ANQR GRCGRVS Sbjct: 307 ILTTNVAETSLTVPNIRYVIDSGLARVKRYSYRNKVEQLQIESISQAAANQRAGRCGRVS 366 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 +GIC+RLYSE D+ SR +FTDPEILR++LASV+L+M++L L I FPF++ P R I D Sbjct: 367 DGICVRLYSELDYQSRSQFTDPEILRSSLASVLLRMSSLRLPKIQHFPFIDKPLGRAIAD 426 Query: 465 GVRLLEELGAI--------TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 GV+LL+ELGAI + +++KLT +G+QL+ LP+DP + RM+L A++ ++ Sbjct: 427 GVQLLDELGAIEFDESEPADGKDINNSFKLTAIGKQLADLPLDPCIGRMLLAAKEQNALK 486 Query: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-QKALSSN 575 E II SAL+ QDPR+RPMD+ A+D+ H +F D+ S+FL+FV LWN+ + Q S+ Sbjct: 487 EVTIIASALATQDPRDRPMDQATAADQAHLQFADERSEFLSFVKLWNWYQDALQHKHSNR 546 Query: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 635 LC++ +L+ R+REW+DI+ QL ++ E G N A Y ++H++LLTGLL ++ Sbjct: 547 QLETLCKSKFLSPRRLREWRDIHGQLHTMLGEKGWKENGLAATYEQVHLSLLTGLLGYVA 606 Query: 636 M---------KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAAR 686 +++ Y GAR R I+PGS + KK W++ EL ET+R++ R A+ Sbjct: 607 KKEEDEKSQDRNSKTGGYVGARGIRPFIWPGSTIGKKAGAWILAGELQETNRMYARTIAK 666 Query: 687 IDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCR 746 I+P+WVE VA H + ++ S+P W+ QG VMA E+ T+YGLPI R+V Y +P R Sbjct: 667 IEPQWVERVAAHRLIKSLSDPFWDNRQGEVMAFERGTLYGLPIYHGRRVRYEPHNPDETR 726 Query: 747 ELFIRHALVEGDWQTRHA---------------------FFRENLKLRAEVEELEHKSRR 785 ELFIR ALV+ + R FF N +L E+E LEH+SRR Sbjct: 727 ELFIRQALVQEEMFGRMDTPALQRETETDAKKKYPNLFNFFWHNRRLIKEIEALEHRSRR 786 Query: 786 RDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISK 845 D+LVDD+ LF FYD RI +V S +W+ K L EK+ L++ A I+ Sbjct: 787 PDVLVDDDLLFAFYDSRIPKEVRSRESLKAWFSKDPELDSQ-LRLEKADLMRHEAAGITV 845 Query: 846 LDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIA 905 YP G +L L+Y FEPG+ DGVT+ +PL LNQV+ EW +PG+ E V Sbjct: 846 DRYPKNMLVGGAQLSLTYHFEPGSPKDGVTLVVPLTQLNQVDGRRCEWLVPGMCEEKVHL 905 Query: 906 LIKSLPKPVRRNFVPAPNYAEAFLGR----VKPLELPLLDSLERELRRMTGVTVDREDWH 961 L+KSLP+ +RR+ VP P+YA++FL R + LDSL ++R+ G+ + R D+ Sbjct: 906 LLKSLPQKLRRHCVPLPDYAKSFLERKLEEKQFGVGDFLDSLISDIRKERGLEIKRTDFR 965 Query: 962 WDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVAD------------ 1009 + +P H + FR++D+ ++L+ R+L L+ + A+A Sbjct: 966 PESLPLHSSMNFRLIDEHGRQLEVERNLSRLRSEYGETARSAFQAIAQETAQVELGVEPT 1025 Query: 1010 -------------DGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 +EQ G W FG+LPE+ E ++GN + +PALVD D +++F Sbjct: 1026 QKAGSNSSNEANARKVEQGGYRAWEFGELPETLEIQKGNKTLFGYPALVDRIDYCDLEVF 1085 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 D+ LE ++ GLRRL L+ +K L ++LP +LGL F G V LID ++ Sbjct: 1086 DDLLEARKQHALGLRRLFALSNKDTLKALQKQLPGIRELGLLFINVGSVEGLIDHILNLA 1145 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 +++ PV E F + + L +I++ L A ++ K++ Sbjct: 1146 LERAFMGESLPV-NAEQFTERLQAGKPRLALIAQEISRHALNALQAHADLQKKIA-SAKA 1203 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 +DI+AQM GL++ FV + +L RYL+AI R++KL +P RD Sbjct: 1204 ASPSAYADIQAQMQGLIFPKFVADIPYAQLVHVPRYLKAIAMRIDKLRSNPSRDAQCQKD 1263 Query: 1237 VENVQQAWQQWINKLPPARR----EDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1292 E+V + WQ+ + A ED+ + + RW +EELRV+ +AQ+L TP P+S KR+ Sbjct: 1264 WESVARPWQKLMQGNKGAASYAMTEDQALTDFRWQLEELRVALYAQELKTPTPMSLKRLE 1323 Query: 1293 QAMEQI 1298 + + + Sbjct: 1324 KVLASL 1329 >UniRef50_B6BTD8 ATP-dependent helicase HrpA n=2 Tax=Betaproteobacteria RepID=B6BTD8_9PROT Length = 1223 Score = 1371 bits (3549), Expect = 0.0, Method: Composition-based stats. Identities = 484/1230 (39%), Positives = 763/1230 (62%), Gaps = 14/1230 (1%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++ + LP+ + + + I+++QV I+ GETGSGKTTQLPKIC+++GRG +IGHTQ Sbjct: 2 KLDFSSPLPILENIDQVAKIIKNNQVTIICGETGSGKTTQLPKICIKIGRGKNKIIGHTQ 61 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRR+AAR+VA RIA+EL+T G +GYKVRF+D S +T +KLMTDG+LLAE Q D LL Sbjct: 62 PRRIAARSVATRIAQELETSIGNEVGYKVRFTDKTSSHTKIKLMTDGVLLAETQSDPLLK 121 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEV 249 +YDT+IIDEAHER+LNIDFL+G++K+LLP+RPDLKIIITSATID ++FS+HF+ AP +E+ Sbjct: 122 RYDTLIIDEAHERNLNIDFLIGFIKQLLPKRPDLKIIITSATIDADKFSKHFDGAPTLEI 181 Query: 250 SGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA 309 SGRT+PVE YRP+ ++ +++++ + E+ ++ GDIL+F+ GE++I D Sbjct: 182 SGRTFPVETLYRPMKNIEEEDVLSIEESVYEVIQEIGRK-SGDILVFLPGEKDIHDIRRY 240 Query: 310 LNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTA 369 LN++ E+LPL++RL +Q ++F + + +RI+LATN+AETSLTVP IK+VID G A Sbjct: 241 LNEMLNHDYEVLPLFSRLPVPDQQKIFTTSTKKRIILATNIAETSLTVPNIKFVIDSGLA 300 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEIL 429 R+ RY+ R ++++L IE ISQA+ANQR GRCGR++ G+C RLY EDDF +R E+TDPEI+ Sbjct: 301 RVVRYNPRLRIEQLLIEKISQAAANQRTGRCGRIAPGVCYRLYDEDDFKNRSEYTDPEIM 360 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 R++LASVIL+M +L LGD+ FPF++AP K+ IQDG LL EL A+ + +T L Sbjct: 361 RSSLASVILRMASLNLGDVEVFPFIDAPFKKFIQDGYDLLFELHAVEKN-----RAITEL 415 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GR ++Q+P+DP +R+++EA C+ E + I +A+S+ DP ERP DK + +++ FH Sbjct: 416 GRTMAQIPIDPVFSRIIIEASNQHCLSEIIPIIAAISVADPIERPFDKLEEAEKAQMNFH 475 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 D S F++F LW L ++ ++ F C+ +L++ R+REWQ++Y QL Q+V+ELG Sbjct: 476 DPRSGFMSFYRLWLLLLDEVRSKKIKDFAVFCKKYFLSFTRMREWQEMYKQLMQIVEELG 535 Query: 610 IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM 669 N++ + Y +IH +LL GLL +IG K+ + Y G ++ RF I P K KW+M Sbjct: 536 YRFNNKESTYDQIHQSLLCGLLRNIGFKEVESNYYLGCKSLRFLIGPK-LFRNKKFKWIM 594 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPI 729 AE+++T + + + A I+ +W+E A+HL++ YS P + + V AT+K++++GL I Sbjct: 595 AAEIIDTGKFYAQCIAEINDQWIEKYAEHLLEAEYSNPRFNKKLNRVDATQKLSLFGLVI 654 Query: 730 VAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDIL 789 V R ++Y I+P L + +FIR +VE + + F++EN KL E+E+LEHKSRRRDIL Sbjct: 655 VPDRTIHYGPINPELSKSIFIRQGIVENQYISPGLFWKENQKLIREIEDLEHKSRRRDIL 714 Query: 790 VDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYP 849 ++D+ LFEFYD++I+ +VI+A F+ W K V + P+ L K L++ A+ I++ YP Sbjct: 715 INDDVLFEFYDEKINENVINAAGFEHWRKGVEKNQPEHLYLTKEYLMQHSAKDITETVYP 774 Query: 850 NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKS 909 N K +L Y FEP DG+T+ IPLP LN ++ S +W +PGL +E + K+ Sbjct: 775 NHITINQQKYQLKYHFEPNHPRDGLTIAIPLPNLNLIDSSELDWLVPGLLKEKITWSFKN 834 Query: 910 LPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHL 969 LPK +RR +P ++ E FL P + ++ R + + D ++ +P HL Sbjct: 835 LPKDIRRKCIPVKDWLEKFLEY--PRQGSFKETFTRFIWKYVDPHFLMSDDYFAYIPSHL 892 Query: 970 KITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESY 1029 KI + V++D+ K + L LK K V+ + + + IEQ G+ W +LP Sbjct: 893 KIKYEVINDQGKMIDLNEDLDLLKKENKKNVEAVVERIQFN-IEQDGITSWPIEELPIKV 951 Query: 1030 EQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKL 1089 EQ K +A+PALVD ++S++I++FDNP +Q GLRRL+ + K + + Sbjct: 952 EQTINGKKFEAYPALVDYQNSISIEVFDNPKRAEQHHVQGLRRLIYFHFKERFKRIQKMP 1011 Query: 1090 PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTV 1149 P+ ++ + + +L+++ VD++I + + + + L R L + Sbjct: 1012 PDLSEAAIALSTQIPPKDLMENLCDVIVDEMI-GHKTNIRKQIDYEQLINDGRNNLPRMI 1070 Query: 1150 VDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDT 1209 + + +I + I K + + + + Q+ L+ + +L Sbjct: 1071 DHMTMHLNKIASFYKEIQKLRQSQSYIEEIEDDI--EEQLEALLPPYEKPLFQYDKLQFI 1128 Query: 1210 LRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDV-KEIRWMI 1268 +YL+A++ R+EK D+ + + ++ W + + E ++ + +W + Sbjct: 1129 PKYLEALKLRIEKYPQRIDHDQECISQYNRIKNKWVEKVLGFVENELEIPEIYIDFQWKL 1188 Query: 1269 EELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 +ELRVS+FAQ+L T PIS KR+ + QI Sbjct: 1189 QELRVSFFAQELKTNSPISVKRMDKEWTQI 1218 >UniRef50_A9GK92 ATP-dependent helicase HrpA n=2 Tax=Myxococcales RepID=A9GK92_SORC5 Length = 1263 Score = 1370 bits (3547), Expect = 0.0, Method: Composition-based stats. Identities = 541/1269 (42%), Positives = 765/1269 (60%), Gaps = 13/1269 (1%) Query: 37 VKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVV 96 P + QE G+ A+ + +P+ LP+S + +DI AI HQVV Sbjct: 3 PPRPTVSHRVPQEQPPAPPSPGGRTSSPPASGGPVRFPEELPISARVRDIARAIEAHQVV 62 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 IVAGETGSGKTTQLPKIC+ +GRG+ IG TQPRR+AA +VA R+A+EL E G +GY Sbjct: 63 IVAGETGSGKTTQLPKICLAMGRGLSARIGVTQPRRIAATSVAARVAKELGVELGKEVGY 122 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 K+RFSD S T VK MTDGI+LAEIQ D L YDT+IIDEAHERSLNIDFLLGYLK L Sbjct: 123 KIRFSDRTSPATYVKYMTDGIVLAEIQGDPRLSGYDTLIIDEAHERSLNIDFLLGYLKRL 182 Query: 217 LPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ 276 LP+RPDL++I++SAT++ +RF+ +F AP+IEVSGRTYPVEV +R + Sbjct: 183 LPKRPDLRVIVSSATLETDRFAAYFGGAPVIEVSGRTYPVEVIHRRPESGEAEVADAVAA 242 Query: 277 AIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVF 336 + + + GDIL+F+ GEREI DT L + L HT +LPLY RL S+Q RVF Sbjct: 243 TVEEITSI---DPRGDILVFLPGEREIHDTMAELTRHGLPHTTLLPLYGRLPQSDQQRVF 299 Query: 337 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 QS GRRIVLATNVAETSLT+PGI YVID G AR++RYS RT V +L IEPIS+ASA+QR Sbjct: 300 QSLPGRRIVLATNVAETSLTIPGIVYVIDSGLARVNRYSPRTGVTQLQIEPISRASADQR 359 Query: 397 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 KGR GRV G+C RLY E D +RP +TDPEILR L+ VILQM ALGLG I FPF++A Sbjct: 360 KGRAGRVQSGVCFRLYDEQDDRARPAYTDPEILRVGLSGVILQMKALGLGAIEDFPFLDA 419 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 P KR + +G R+LEELGA+ A +LT +GR+L++LP+DPRL RMVL + G + Sbjct: 420 PSKRAVDEGYRVLEELGALDD-----AGELTDIGRKLARLPLDPRLGRMVLGGESEGALA 474 Query: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA 576 E +II +AL +QDPRERP+ Q+ +D+ HR+F D+ SDF+ + LW++ + Q L+ N Sbjct: 475 EVLIIAAALGVQDPRERPLAAQKQADDAHRKFKDEASDFVGLLKLWSFYQDAQGRLTQNQ 534 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 R+ CR +++YLR+REW D++ Q+ ++ KE+G N PA+ IH ALL GLLS IGM Sbjct: 535 LRKACRDHFVSYLRMREWADVHRQISRITKEMGFSPNDAPAKGDAIHRALLPGLLSRIGM 594 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 + + + Y GAR RF + P SGL KKPP W+M AELVETS+L+ R+AA +DP W+E A Sbjct: 595 WNQENKVYLGARQTRFQLHPSSGLAKKPPAWIMAAELVETSQLFARMAAALDPAWIEAAA 654 Query: 697 QHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVE 756 L KR++S+PHW AVMA E+VT+YGLPI R+V++ IDP R++F+ HALV Sbjct: 655 GPLCKRSHSDPHWAAKPAAVMAREQVTLYGLPIARDRRVDFGAIDPKSARQIFLVHALVR 714 Query: 757 GDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSW 816 ++ TR F N +L EV L K+RR ++L D+ L F+D+R+ V S + F++W Sbjct: 715 QEYATRAPFMEANRRLFEEVSRLRDKARRSEMLADEHALELFFDRRVPEGVYSGKTFEAW 774 Query: 817 WKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTV 876 K+ E P L+ + ++ + A ++ +P+ + LSY+F+PG D DG+++ Sbjct: 775 RKEAEAEDPRALHLSLADVLLDEAADLTPERFPDSLDLYGAAVPLSYRFDPGEDDDGISL 834 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE 936 +PL LL Q + EW IPG E + L++SLPK +R+ VP A ++P + Sbjct: 835 SLPLVLLPQADPDELEWMIPGWHAEKIAQLLESLPKSLRKALVPLREVAREIAAELRPFQ 894 Query: 937 LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 PL +L R + T V + + +P +L+ FRV+D+ + + EGR L++LK+ L Sbjct: 895 GPLRPALARAVEDRTAERVPADAFRPQDLPPYLRFYFRVLDEDGRVIGEGRELRELKERL 954 Query: 997 KGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 G+ +E + V G+E+ GL +S LPE + G +KV +PAL+D SV++++ Sbjct: 955 SGRAREAWARVGKAGLERDGLTSFSVEALPERVQVDAGRHKVFGYPALIDGETSVSVRVL 1014 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVL-ELIDDCISC 1115 + +A GLRRLLLL + + L + L + + L Sbjct: 1015 ASRAAAAEATRAGLRRLLLLQLGGKMSQLEQPLRSAVAVSGLGAKVAPGEPGLARQIALR 1074 Query: 1116 GVDKLIDANGG--PVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGR 1173 +D+ T+ F A +K R L + +A +I + + L+ Sbjct: 1075 ALDEAFQLGDPGAFPRTKAAFQARLDKGRGSLQGVLGKLAGLAREIGVELDRVQAMLRSM 1134 Query: 1174 VDMTMA--LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDR 1231 A L D++ Q+ L+ G + RL RYL+A + RLE+L P +D+ Sbjct: 1135 TGKPGAPRPALDDVRTQVDFLLPVGLFSRAPIDRLAHLPRYLRAAQIRLERLPNGPQKDQ 1194 Query: 1232 AQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 ++ +V Q + + L E+++ RW+IEELRVS FA +L P+S +R+ Sbjct: 1195 SKAAQVLPFWQDYLKHQQGLRDKGVPAEELESFRWLIEELRVSLFAPELKAAVPVSPQRL 1254 Query: 1292 LQAMEQISG 1300 + +++ G Sbjct: 1255 TEQWKRLLG 1263 >UniRef50_C7NIQ1 ATP-dependent helicase HrpA n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ1_KYTSD Length = 1331 Score = 1369 bits (3545), Expect = 0.0, Method: Composition-based stats. Identities = 643/1322 (48%), Positives = 841/1322 (63%), Gaps = 111/1322 (8%) Query: 83 KQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRI 142 K D+ AIRDHQVV+VAGETGSGKTTQLPKIC+ELGRG+ G+IGHTQPRR+AAR+VA+RI Sbjct: 5 KDDLAAAIRDHQVVVVAGETGSGKTTQLPKICLELGRGVTGMIGHTQPRRIAARSVADRI 64 Query: 143 AEELKTEPGGC---IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 A EL E +GY+VRF+D S T+VK+MTDGILL ++Q DR L YDT+IIDEA Sbjct: 65 AHELGVELEDPQGPVGYQVRFTDLSSPTTLVKVMTDGILLNQMQFDRDLRAYDTLIIDEA 124 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-----NNAPIIEVSGRTY 254 HERSL IDF+LGYL++LLPRRPDLK+IITSATIDPERF+ HF N API+EVSGRTY Sbjct: 125 HERSLTIDFILGYLQQLLPRRPDLKVIITSATIDPERFAHHFADAEGNPAPIVEVSGRTY 184 Query: 255 PVEVRYRPIVEEA------------------DDTERDQLQAIFDAVDELSQESHG----- 291 PVE+RYRP+ + + + DQ+ I AV EL E G Sbjct: 185 PVEIRYRPLSLQETSNVAALADPEGYDETVYGEDDIDQVTGIGQAVQELWTEVIGPDDPR 244 Query: 292 ----DILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 DIL+F SGEREIRD +AL L L TEI+PLY RLS++EQ RVF HS RR+VLA Sbjct: 245 PQDRDILVFCSGEREIRDATEALEGLKLPGTEIVPLYGRLSSAEQQRVFAPHSTRRVVLA 304 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPGI+YV+D GTARISRYS R KVQRLPIE IS+ASANQR GR GRVS GI Sbjct: 305 TNVAETSLTVPGIRYVVDTGTARISRYSQRLKVQRLPIEKISRASANQRAGRSGRVSAGI 364 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLYS++DF +RPEFTDPEI RT+LASVILQM LGLGD+ F FV+ PD R I DG+R Sbjct: 365 CIRLYSQEDFEARPEFTDPEIQRTSLASVILQMAHLGLGDVQRFGFVDPPDPRQITDGLR 424 Query: 468 LLEELGAITTDEQASAY--KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 LL ELGA+T + + LTP GR+L+ +P DPRLARM+LEA + G + E ++I + L Sbjct: 425 LLHELGAVTRETASRGGVVTLTPEGRELASIPADPRLARMLLEAHRRGALAEVLVIVAGL 484 Query: 526 SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY 585 SIQDPRERP +K++ +D+ H RF D+ SDF+A +NLW Y E++ +LS +AFRRLCR ++ Sbjct: 485 SIQDPRERPAEKRERADQLHARFKDENSDFVALLNLWQYARERKGSLSGSAFRRLCRAEF 544 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPVNS------------------EPAEYREIHIALL 627 L+YLR+REW D++ QLR VVK LG +S +PA+ +H +LL Sbjct: 545 LHYLRLREWVDVHHQLRSVVKGLGWQDSSLGLESDRTRQRDHGFAPVDPAKAEVVHRSLL 604 Query: 628 TGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 GLLS +G++D + ++Y GAR A FSI PGSGLF+ P W+M AELVET+RLW R A + Sbjct: 605 PGLLSQVGLRDRETRDYLGARGAHFSIQPGSGLFRTRPDWIMSAELVETTRLWARTNATV 664 Query: 688 DPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRE 747 DP WVE A HL+KR YSEP W + + +A E+VT+ G+P+VA R+V + +D L RE Sbjct: 665 DPAWVEEAADHLVKRQYSEPRWSAKRASAVADERVTLLGIPLVAGRQVGLATVDAPLARE 724 Query: 748 LFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDV 807 LFIRHALVEGDWQT HAF+ N K+ AEVE+LE +SRRRD+L DDE LF FYD+R+ +V Sbjct: 725 LFIRHALVEGDWQTGHAFWGHNKKVLAEVEQLEARSRRRDLL-DDEALFAFYDERLPAEV 783 Query: 808 ISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEP 867 +SA HFDSWWK R P LL+ ++ E + + D+P W QG+++L L+YQFEP Sbjct: 784 VSAAHFDSWWKSHRRTEPHLLDLSVEEVVGEDSSGVDLADFPATWVQGDVELPLTYQFEP 843 Query: 868 GADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA 927 G +ADGVT H+ L LN+V + GF+WQ+PGLR EL +AL++SLPK VRR+FVPAP++A A Sbjct: 844 GTEADGVTAHLTLSQLNRVRDEGFDWQVPGLREELAVALLRSLPKAVRRSFVPAPDHAAA 903 Query: 928 FLGRVKP---------------LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT 972 L + +L L R TG +D D VP HL++T Sbjct: 904 ALKDLSEQLADAPTGTATEPMRGSGTFAAALAGALTRRTGTPLDPADMDTAAVPAHLRMT 963 Query: 973 FRVVDD----KNK----------------------------KLKEGRSLQDLKDALKGKV 1000 FRV +D + L EG L L+ L G + Sbjct: 964 FRVTEDAPGEGGRVPGGKGAGGGAPRGKGSRGRRGPRQRPTVLAEGNDLTALQAQLAGSL 1023 Query: 1001 QETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPL 1060 QE ++ A G+ SGL W+ +LP G V+ WPALVDE + +++F +P Sbjct: 1024 QEAVAGAA-AGLTASGLTSWTLDELPAH--FDDGG--VQGWPALVDEGTTAGVQVFADPR 1078 Query: 1061 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 + GLRRL+L P + + N+ KL L P+G L++D ++ VD + Sbjct: 1079 QAAHEHALGLRRLVLAGFNPPWNRILRSVDNQTKLALGAAPHGSTQALLEDALAAAVDSV 1138 Query: 1121 ID---ANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 I A G V T E F + + ++++ ++L V + + ++ Sbjct: 1139 IAERLAAAGTVRTREAFEQVQATAVQQAAPRILEMVGAAGKVLAGVPAVERAVESMTAPR 1198 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 +A D+ AQ+ GLV+ GF+T G++++ RYLQA+E+R K D RD ++ V Sbjct: 1199 LAPLREDLTAQLRGLVHPGFLTHAGYEQVRHLPRYLQAMEQRAAKAPTDLARDTERLAVV 1258 Query: 1238 ENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 + V++ + L R DV+ +RWM EELRVS FAQQLGT + +S+KRI AM+ Sbjct: 1259 QTVERERADLLAGLDELERLRPDVRALRWMTEELRVSLFAQQLGTAHAVSEKRIYAAMDA 1318 Query: 1298 IS 1299 + Sbjct: 1319 VE 1320 >UniRef50_D1BIN2 ATP-dependent helicase HrpA n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BIN2_SANKS Length = 1560 Score = 1369 bits (3545), Expect = 0.0, Method: Composition-based stats. Identities = 660/1481 (44%), Positives = 859/1481 (58%), Gaps = 221/1481 (14%) Query: 23 DRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQK 82 D R R G ++ + A+ +D P I +P+ LPVS + Sbjct: 92 DERRGKDRRTGDRRPRVDHARLERAAAARTAVD------------LPPIVFPEQLPVSAR 139 Query: 83 KQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRI 142 ++DI AIRDHQVVIVAGETGSGKTTQLPKI +ELGRG G IGHTQPRR+AARTVA RI Sbjct: 140 REDIAAAIRDHQVVIVAGETGSGKTTQLPKIALELGRGRAGQIGHTQPRRIAARTVAERI 199 Query: 143 AEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202 AEE+ T G +GY+VRF+D S+NT+VK+MTDGILLA+IQ+D L+ YDT+IIDEAHER Sbjct: 200 AEEIGTPLGEIVGYQVRFTDTSSENTLVKVMTDGILLAQIQRDPQLLAYDTLIIDEAHER 259 Query: 203 SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN------------------- 243 SLNIDF+LGYL +LLP+RPDLK+IITSATID +RF+RHF Sbjct: 260 SLNIDFILGYLTQLLPQRPDLKVIITSATIDSDRFARHFAPRDAQDAAKAAAQTEPVDGT 319 Query: 244 ----------APIIEVSGRTYPVEVRYRPIVEEA----DDTERDQLQAIFDAVDELSQES 289 AP++ V+GRT+PVEVRYRP+ E ERD + I DAVDEL E Sbjct: 320 DDTSADDAPMAPVVSVTGRTFPVEVRYRPLTPEDSSAKKGAERDLMTGICDAVDELCAEG 379 Query: 290 HGDILIFMSGEREIRDTADALNK---------LNLRHTEILPLYARLSNSEQNRVFQSHS 340 GDIL+F+SGEREI D DAL H EI+PLYARLS +EQ+RVFQSH Sbjct: 380 PGDILVFLSGEREILDAQDALASHLGARVNDPRRPDHVEIMPLYARLSAAEQHRVFQSHP 439 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 GRR+VL+TNVAETSLTVPGI+YV+DPGTARISRYS TKVQRLPIEPI+QASANQR GRC Sbjct: 440 GRRVVLSTNVAETSLTVPGIRYVVDPGTARISRYSKATKVQRLPIEPIAQASANQRSGRC 499 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEA 456 GRV++GI IRLYSEDDFLSRPEFT+PEILRT+LASV+LQM ++G+ D+A FPFVE Sbjct: 500 GRVADGIAIRLYSEDDFLSRPEFTEPEILRTSLASVLLQMISVGVVRTPDDVARFPFVEP 559 Query: 457 PDKRNIQDGVRLLEELGAI---------------------------------TTDEQASA 483 PD R I+DGV+LL ELGA+ Sbjct: 560 PDTRAIRDGVQLLTELGALETRKPERRGATSRPAGTHVEGGSSAPSDERASRDALGSGGG 619 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 +LT GR ++QLP+DPRLARM++E + G RE MII +ALSIQDPRERP +++ +D+ Sbjct: 620 TRLTETGRAIAQLPMDPRLARMIVEGGRRGAAREVMIIAAALSIQDPRERPTEQRAQADQ 679 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 +H RF D SDFL+++NLW Y QQ+ LSS+AFRRLCR ++LN+LR+REWQD+ QLR Sbjct: 680 QHARFTDPTSDFLSYLNLWEYARAQQRDLSSSAFRRLCRAEHLNFLRIREWQDVVGQLRD 739 Query: 604 VVKELGIPVNSEPA--------------------EYREIHIALLTGLLSHIGMKDAD--- 640 + K LGI +N+ + IH +LL GLLS IGM++A Sbjct: 740 MSKPLGIVMNAPGRRSGGSSTDEPVADLDLRQTWDGDTIHQSLLAGLLSQIGMQEATEVK 799 Query: 641 -------------------KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 + EY GAR ARF+IFPGSGL KKPP WVM ELVETSRLWG Sbjct: 800 ASAVKGRETAADRRAKKFARNEYLGARGARFAIFPGSGLAKKPPVWVMAGELVETSRLWG 859 Query: 682 RIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQID 741 R A+I PEW E +A HL+KRTYSEPHW QGA A EKV +YG+PIVA RKV +S++D Sbjct: 860 RDVAKIQPEWAEDLAAHLVKRTYSEPHWSSKQGAAQAIEKVLLYGVPIVADRKVLFSKVD 919 Query: 742 PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQ 801 P RELFIRHALV+G+W T H F+ +N +L E ELE +SR+R ++VDD+ LF FYD+ Sbjct: 920 PEQARELFIRHALVQGEWTTHHTFYADNRRLLDEAAELEARSRQRGLVVDDDALFAFYDE 979 Query: 802 RISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRL 861 R+ V+SARHFD WWK RE PDLL F +L+ EG ++S D+P W QG+L L L Sbjct: 980 RVPASVVSARHFDQWWKSARREDPDLLTFTLDLLVPEG-TEVSAEDFPQEWVQGDLTLPL 1038 Query: 862 SYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPA 921 +YQF+PG DADGVTVH+P+ +LN+V GF+W +PGL EL A I++LPKPVR VPA Sbjct: 1039 TYQFQPGTDADGVTVHVPISVLNRVVPDGFDWMVPGLLDELTTATIRALPKPVRVQLVPA 1098 Query: 922 PNYAEAFLGRVKPL-------------ELPLLDSLERELRRMTGVTVDREDWHWDQVPDH 968 P+ A + ++ + R ++ + V V + W +++P H Sbjct: 1099 PDVARGVVAWIRENTPAWGDVTRAGDMAESYESAFTRAVKALRDVDVPEDAWDRERLPGH 1158 Query: 969 LKITFRVVDDKNK---------KLKEGRSLQDLKDALKGKVQETLSAVADDGI------- 1012 L++TFRV +++ L E + L L+ L + Q + + + Sbjct: 1159 LRMTFRVFEERGGRGSGPRGEVVLDESKDLVALQRRLAAQSQAAVRSAVKSAVGTALREA 1218 Query: 1013 ---------------------------------------------EQSGLHIW----SFG 1023 E + L W G Sbjct: 1219 QQEAQDAAAASQKAGTGAPGAAAATGGPTAPAASTPDAPTGVTVAEVASLATWPSALPDG 1278 Query: 1024 QLPESYEQK-RGNYKVKAWPALVDER----DSVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 LP + G V+ +PALV+ER +VA+++ + Q+ G+RRLLL Sbjct: 1279 VLPAQVDTPGPGGMVVRGYPALVEERSGSTTTVALRVLADASRQEVEHTRGVRRLLLGET 1338 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALH 1138 + + L L +PY L+ D V + + + G V + A+ Sbjct: 1339 ALQQSRITSRWSGTQSLTLAASPYKNTGALVADLQLAAV-QCLTPDAGQVRDLAAYTAMR 1397 Query: 1139 EKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFV 1198 V+ L + + + V LTA ++ ++ + + L+D++ + GLVY GFV Sbjct: 1398 TAVKKALEEEIHTVVGHVVAALTAARTVDGEIRSSSSLALLNTLADVRDHVAGLVYDGFV 1457 Query: 1199 TGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRED 1258 RL RYL+A RLEK A +P+RD KV +V+ A+ R + Sbjct: 1458 AATPPGRLPHLARYLRAASYRLEKAASNPNRDAELAWKVHDVEDAYDAARAAYAAGRPDP 1517 Query: 1259 E---DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAME 1296 ++ + RWMIEELRVS FAQQLGT P+S+KRI + + Sbjct: 1518 ARASELAQARWMIEELRVSLFAQQLGTDGPVSEKRIRKLLA 1558 >UniRef50_B0TXK9 HrpA-like helicase n=2 Tax=Francisella philomiragia RepID=B0TXK9_FRAP2 Length = 1266 Score = 1369 bits (3543), Expect = 0.0, Method: Composition-based stats. Identities = 520/1263 (41%), Positives = 776/1263 (61%), Gaps = 31/1263 (2%) Query: 43 QQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET 102 D + P+ITYP +LPV++K DI + I D+QV++VAGET Sbjct: 28 NNNKLPRQQLLTDLQLLAEQTSQKILPKITYP-DLPVAEKVDDIKKLIEDNQVIVVAGET 86 Query: 103 GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSD 162 GSGK+TQLPKIC++LG G +GLIGHTQPRRLAAR++A+R+A E+ + + +K+RFSD Sbjct: 87 GSGKSTQLPKICLDLGLGKRGLIGHTQPRRLAARSIASRVATEIGDQ--SKVSFKIRFSD 144 Query: 163 HVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD 222 S+NT++K+MTDG+LL+EI+ D+ L QY+ IIIDEAHERSLNIDFLLG +K++LP RPD Sbjct: 145 QTSENTLIKVMTDGVLLSEIKNDKFLSQYEVIIIDEAHERSLNIDFLLGCIKKILPYRPD 204 Query: 223 LKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAV 282 LK+IITSATID ++F +F NA I +SGRTYPVE+RY+ + D E + I A+ Sbjct: 205 LKVIITSATIDHQKFIDYFQNAKDITISGRTYPVEIRYQ---NDEDFEEFSLQERILYAL 261 Query: 283 DELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG- 341 DEL GD+L+F+ ER+I +T LNK +LR TE+LPL++RLSN +QN++F Sbjct: 262 DEL---GRGDVLVFLPTERDIHETLAYLNKQDLRFTEVLPLFSRLSNKDQNKIFNPEGSV 318 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 RR++LATNVAETSLTVP IKYVID G ARISRYSYRTKVQRLPIE ISQASANQR GRCG Sbjct: 319 RRVILATNVAETSLTVPRIKYVIDSGLARISRYSYRTKVQRLPIEKISQASANQRAGRCG 378 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 R+S G+CIRLYSE+DF +R E+TDPEILRTNLASVILQM L LG I FPF+++PD R Sbjct: 379 RLSAGVCIRLYSEEDFNNRKEYTDPEILRTNLASVILQMLFLKLGSIQDFPFIDSPDSRF 438 Query: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 ++DG +LL EL AI ++ S K+T G +++ +P+DP+LA++V+E + +RE + I Sbjct: 439 VKDGFKLLFELQAI-SELNYSKPKITDDGMKMAIMPLDPKLAKIVIEGHRQNTLREIVSI 497 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 S LS+QDPRERP++ QQ +DEKH DK SDF+A +NL N L K+LS+ + Sbjct: 498 VSFLSVQDPRERPLNFQQKADEKHAIDKDKSSDFIAILNLANRLNSDLKSLSNREKKEYF 557 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA-EYREIHIALLTGLLSHIGMKDAD 640 + ++++ +R EW DIY Q+ +VV + ++S Y +H A+ +G LS++G + + Sbjct: 558 KKNFISPVRFNEWNDIYRQIVEVVHQFKWKLSSNEKLNYENLHKAIASGFLSNVG-FNYE 616 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 EY GAR +F IFPGS FK PKW++ +E+VET++ + R A+I+PEW+E +A+HLI Sbjct: 617 NAEYLGARGLKFFIFPGSSQFKAKPKWLLSSEIVETTKTYARNVAKIEPEWLESLAEHLI 676 Query: 701 KRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQ 760 K+ Y EP W + + AV+ E+VT+YGL IV+ R V YS+I+P RE+FIR ALV GD+ Sbjct: 677 KKHYDEPVWSKKRRAVVVNERVTLYGLEIVSKRSVQYSKINPQEAREIFIREALVNGDFD 736 Query: 761 TRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKV 820 ++ F+++NLKL +VEELE+KSRR+DILVD+E +F YD I DV S FD W K V Sbjct: 737 SKAYFYQQNLKLINQVEELENKSRRKDILVDEEVMFAHYDSFIPDDVCSGATFDKWLKSV 796 Query: 821 SRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 ++E F+ L++ A++I++ +P+ ++ L L Y F+P + DG TV +P+ Sbjct: 797 TKEQQKGFIFDIESLMQHDAKEITQQKFPDVLTIADMHLPLEYHFDPLDERDGATVTVPI 856 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL--- 937 +N + + EW + G + ++AL+++LPK +R+N VP P YA+A + + Sbjct: 857 VFINDINPTVLEWGVYGFLYDKIVALLRALPKNIRKNCVPVPTYAQAIFESIDFDKDRHS 916 Query: 938 PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALK 997 PL + + + R+ G VD W +++ HL + +VVD++ K L G+ + LK LK Sbjct: 917 PLKSIIAKHITRIVGFVVDETVWQDEELEKHLVLNVKVVDEQGKTLAVGKDIHILKQKLK 976 Query: 998 GKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 V A ++++ + W F + + + K VK + L + +D V + Sbjct: 977 NLV-----AKPKQEVDETVYYDWDFADIVMTSQIKEYCITVKVYNCLEEYKDGVKLSYKA 1031 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPI-KYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 E K M L+RL+ L + + + K + + L + + D+ + Sbjct: 1032 TFDEAKLCMQKSLKRLIKLRLQNQLSKNIKSNDLTSLSMSLKLS------DSKDNVVDKA 1085 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLK-GRVD 1175 +D N +T+ F + + + + +I + K+L ++ Sbjct: 1086 MDLSFFDNIELPYTKADFEKFYAFGMQKFALNKTKVEALLLEITKFKSQLEKKLNVKKIP 1145 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 + +D++ ++ L +++ + L YLQA+E RLEK ++ RDR + Sbjct: 1146 LNFIELFTDVRNELTELFTDDYISQ-PVEFLQRYKYYLQALENRLEKAKLNLQRDRGYQV 1204 Query: 1236 KVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 +V ++ + I + E ++ + +I+EL VS++ Q + T +S K+IL + Sbjct: 1205 EVNELRSKLAKKITANHIGKSELIGIR-VSNLIQELWVSWYLQSVKTIESVSYKKILAYI 1263 Query: 1296 EQI 1298 +I Sbjct: 1264 NEI 1266 >UniRef50_C0QAN7 HrpA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAN7_DESAH Length = 1333 Score = 1368 bits (3541), Expect = 0.0, Method: Composition-based stats. Identities = 514/1334 (38%), Positives = 748/1334 (56%), Gaps = 48/1334 (3%) Query: 9 FTALQQRLDSLMLRDRLRFSR---RLHGVKKVKNPDAQ--QAIFQEMAKEIDQAAGKVLL 63 +++ L M DR + RL + K PD Q+ + +D++ + Sbjct: 4 VKKIERLLPETMCADRYCLVQDVQRLKRLIKQNTPDRAGLQSRIAALEGRVDKSRQEREQ 63 Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R+A+ P+I Y LP++ KK +I+ A++ H+VVI++GETGSGKTTQ+PK CM GRG G Sbjct: 64 RQASMPDIAYLPELPITGKKDEIIHALKFHRVVIISGETGSGKTTQIPKFCMAAGRGAAG 123 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 IG TQPRR+AA TVA RIAEEL PGG +G+K+RF D S ++++K+MTDGILLAE Q Sbjct: 124 KIGCTQPRRIAAITVAARIAEELGQLPGGVVGHKIRFDDRSSKDSIIKIMTDGILLAETQ 183 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D L +YDTII+DEAHERSLNIDF LG L+ L+ +RPDL +++TSATID E+FS+ F+N Sbjct: 184 HDPFLNEYDTIIVDEAHERSLNIDFTLGILRNLVRKRPDLTLVVTSATIDTEKFSKAFDN 243 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERD--QLQAIFDAVDELSQESH-GDILIFMSGE 300 AP+IEVSGR +PVE+RY PI + +D D ++A AVDE+ ++S GDIL+FM E Sbjct: 244 APVIEVSGRMFPVELRYAPIDDPDNDDLDDQGYVEAAAGAVDEIQRQSRTGDILVFMPTE 303 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 R+I +T + + T +LPL+ARLS +Q RVF GR+I+++TNVAETSLT+PGI Sbjct: 304 RDIEETIELIQGRKYPGTLVLPLFARLSARDQARVFSRGVGRKIIVSTNVAETSLTIPGI 363 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR 420 KYV+D G ARI YS RT+ LP+ PIS++SANQR GRCGRV+ GICIRL+SED F SR Sbjct: 364 KYVVDSGLARILHYSPRTRTTALPVSPISRSSANQRMGRCGRVANGICIRLFSEDAFESR 423 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT---- 476 P FT PEILR+NLA VIL+M +L LG++AAFPF++ P ++I+DG L ELGAI Sbjct: 424 PLFTSPEILRSNLAEVILRMISLKLGNVAAFPFIDPPAPKSIKDGFDTLVELGAIQQRRG 483 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + Q Y LT GR ++++PVDP+L+R++LEA +GC+ EA++I SALSI DPR+RP D Sbjct: 484 KNNQRGGYALTTRGRVMAKIPVDPKLSRILLEADHNGCLDEAVVIVSALSIADPRQRPKD 543 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS-SNAFRRLCRTDYLNYLRVREWQ 595 K Q +D+ H F D SDF+ +N+W + +L N RR C+ ++L++ R REW Sbjct: 544 KVQHADQMHAAFKDPSSDFVTLLNIWKAYVAAEHSLKTRNQVRRFCKDNFLSFRRFREWG 603 Query: 596 DIYTQLRQVVKELGIPVNSEPA--------------------EYREIHIALLTGLLSHIG 635 DI Q+R V+KE GI ++ + Y +H ++L G L++I Sbjct: 604 DIQHQIRSVLKEHGITRSNTDSTVTKVGTKGLKAKAFEIGGPFYTALHKSILAGYLANIA 663 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 K +K YT + +IFPGSGL+ W++ AE VET++L+ R A IDP+W+E Sbjct: 664 QK-KEKNNYTATKGRAATIFPGSGLYNSGGSWIVAAEFVETTKLFARGVAIIDPQWLEET 722 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 Q L+ RT+S P WE+ +G V+ATE+++++GL IV R V Y +I+P E+FIR ALV Sbjct: 723 GQELLTRTWSTPRWEKQRGEVVATEQISLFGLVIVPERTVAYGKINPREAGEIFIRQALV 782 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 E + F N L E+ ++E K+RRRDI+V ++ +F FY QR+ D + F Sbjct: 783 EQEVARPLGFMVHNQALIDELRQVEEKTRRRDIVVTEDDMFLFYQQRLDQDFSNLATFTR 842 Query: 816 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 875 + K+ + L L + ++ L +P+ G RL Y F+PGA+ DGVT Sbjct: 843 FLKEQGSD--LFLRMTLEDLQQRSPDRDELLKFPDSLEMGGGSFRLEYGFQPGAETDGVT 900 Query: 876 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL 935 V +P V S + +PGL E + ALIK+LPK R VP + A + Sbjct: 901 VKVPATSAASVSVSTIDRLVPGLLTEKIAALIKALPKRFRVRLVPVADTAAMIADSLPES 960 Query: 936 ELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDA 995 + PL L +++ V + W + +HLKI + D K K++ R L Sbjct: 961 DRPLFVELSHFIKQRFKVDIPPSAWSDATLEEHLKIRISITDAKGKEVAASRENDLLDKY 1020 Query: 996 LKGK-VQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGN-YKVKAWPALVDERDSVAI 1053 KG + L A +E++G+ W FG + +G + L E V + Sbjct: 1021 AKGHGSNDLLFEDAKRRLERTGVTSWDFGDISSPVLLGQGQELSYNVYYGLQSEEQGVGL 1080 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCI 1113 +LF + E +++ G+ +L + + K L + + L + +G + + Sbjct: 1081 RLFKSHAEARRSHVAGVEKLSTICFEADFKALKKDVKKWTLLRPRTSKFGGWERFQNALV 1140 Query: 1114 SCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKR---- 1169 SC +L + V T + F L +K + ++ K + + Sbjct: 1141 SCVFRELFSRD---VRTPKAFLELADKHLPLVYRHGEELMKTMVTLFDEHDRTLTLLKNL 1197 Query: 1170 -LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPH 1228 LK T+ ++ + L+ F + F R+ RY+ AI R E+ AV+P Sbjct: 1198 FLKSGNRPTVLAMAQTLEKDLAALLPELFPSLYDFTRIKKLERYVAAIRIRAERGAVEPV 1257 Query: 1229 RDRAQMLKVENVQQAWQQWINKLPPARRED--EDVKEIRWMIEELRVSYFAQQLGTPYPI 1286 +D + V + L + E V+ WMIEE +VS FAQ+LGT I Sbjct: 1258 KDSVKAGLVAEHTLKLNNLVATLSKESSREKVEAVEAFYWMIEEYKVSVFAQELGTLVKI 1317 Query: 1287 SDKRILQAMEQISG 1300 S KR+ +I Sbjct: 1318 SPKRLNTMWREIQA 1331 >UniRef50_B7GWG2 ATP-dependent helicase HrpA n=17 Tax=Acinetobacter RepID=B7GWG2_ACIB3 Length = 1294 Score = 1366 bits (3537), Expect = 0.0, Method: Composition-based stats. Identities = 538/1315 (40%), Positives = 780/1315 (59%), Gaps = 76/1315 (5%) Query: 19 LMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLP 78 +M RDR R +R ++A E+ K +Q+ KV R P+I +LP Sbjct: 20 VMARDRYRLNRLRKD---------KKANTAEIEKLFEQSNAKVRQRFERLPKIKLNQDLP 70 Query: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138 V+Q ++EAI+ HQV+IVAGETGSGKTTQLP+I M GRG+ G+IGHTQPRRLAAR+V Sbjct: 71 VTQYTDRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARSV 130 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 + RIAEE+ + G IG+K+RF++ S +++V+LMTDGILLAE+ DR L +YDTIIIDE Sbjct: 131 SQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIIDE 190 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258 AHERSLNIDF++GYLK+LLP+RPDLK+I+TSAT+D RFS +FNNAPI EV GR+YPVEV Sbjct: 191 AHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVEV 250 Query: 259 RYRPIVEEA---------DDTERDQLQAIFDAVDE--LSQESHG-----DILIFMSGERE 302 RYRPI E DD E + +A+ AV+E E G DILIF S E+E Sbjct: 251 RYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQE 310 Query: 303 IRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIK 361 IR+ + L K RHTEILPLYARL+ SEQ ++F RRI++ATNVAET+LTVP I+ Sbjct: 311 IRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNIR 370 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YVID G ARISRY+YR++VQRLPIE ISQA+ANQRKGRCGRV+ G+CIRLYSE+DFLSRP Sbjct: 371 YVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSRP 430 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 EFT+PEI RTNLASVILQM +LGLG++ F F+E PD R + DG +LL ELGA+ + Sbjct: 431 EFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN- 489 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 +LT +G+ ++++P+DPRLARM++ G ++E +++ SAL++QDPRERP DKQ + Sbjct: 490 ---ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQA 546 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKA-LSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 D+KH F + +SDFL ++ LW+ L + +A +S N R+ + +L++LR+REW+ + Q Sbjct: 547 DQKHALFKEADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQ 606 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L ++ + L + N +PA Y +H ALLTGLLS I K ++ + R + +FP S L Sbjct: 607 LVELAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTL 666 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE 720 K WVM E+VETS+++ R A+IDPEW+ A+ L+K Y EPHW + G V A Sbjct: 667 HKTNTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYA 726 Query: 721 KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE 780 +++++GL I R VN+ ++D E+F+R AL G+ T F + NL EVE +E Sbjct: 727 QISLFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVE 786 Query: 781 HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA 840 K RRRD++VD+ET+++FY +I ++ S R F+ W V + P L E L Sbjct: 787 DKLRRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDAL--WLN 844 Query: 841 EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR 900 ++ + +P+ H G L+L +Y+F+P D DG TV IP+ L QV+E+ + W IPG R Sbjct: 845 DRPTTQQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRL 904 Query: 901 ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP--LELPLLDSLERELRRMTGVTVDRE 958 +L+ AL+K+LPK RRN VP P+ A + + L + L LR G + + Sbjct: 905 DLIEALLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALR---GEQITEK 961 Query: 959 DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLH 1018 D+ ++++ +L +V+D+K K + +GR L +LK + + + Sbjct: 962 DFSFERIDPYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKG--------- 1012 Query: 1019 IWSFGQLPESYEQ----KRGNYKVKAWPALVDERD----------SVAIKLFDNPLEQKQ 1064 F PE++ K VK + ALV ++ V I+ F++ E + Sbjct: 1013 --EFKTFPENFTFEASQKVTGVVVKQYQALVPTKNFAELEAKDESGVVIQTFNDQAEAIK 1070 Query: 1065 AMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDAN 1124 G+ RL+ + + ++ L +++ L L ++P G +L + + I Sbjct: 1071 QHREGIIRLVHMQLGDLVRQLKKQIS--KPLALAYSPLGDKAKLEQMLVYATLQMAITT- 1127 Query: 1125 GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSD 1184 F L E+V+ + +Q+ I I ++L + D Sbjct: 1128 --LPINAGEFNQLLEQVKKQFLSYGQQALEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDD 1185 Query: 1185 IKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAW 1244 I+ Q+ + FV + RYL+A+ RL++L + RD A + V+ Sbjct: 1186 IEDQLDLMSLGNFVYCQPVDLWQEYPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKV 1245 Query: 1245 QQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 ++ N D +KE+ M+EELR+S F+Q + T PIS R+ + +++ Sbjct: 1246 FKFKN--------DPRIKELYLMLEELRISLFSQPMKTKMPISPTRLQKLWDRLG 1292 >UniRef50_Q0VPC9 ATP-dependent helicase HrpA n=2 Tax=Alcanivorax RepID=Q0VPC9_ALCBS Length = 1316 Score = 1366 bits (3535), Expect = 0.0, Method: Composition-based stats. Identities = 572/1332 (42%), Positives = 809/1332 (60%), Gaps = 62/1332 (4%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 T +L ++LD + DR R +RL G+ ++ ++A I + R A Sbjct: 3 DTLKSLYEQLDKVRRADRFRLKKRLDGLARLPAKKRNDKAVDKVATAIASSVAGREQRLA 62 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 + P + +P +LPV + +I +AI DHQVV++AGETGSGKTTQLPKIC+ELGRGI+G IG Sbjct: 63 SVPALEWP-DLPVVASRDEIKQAINDHQVVVIAGETGSGKTTQLPKICLELGRGIEGTIG 121 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 HTQPRRLAAR VA+R+AEEL + G +G+KVRFS+ V +++++K++TDG+LL EIQQDR Sbjct: 122 HTQPRRLAARAVASRVAEELHSPLGSTVGFKVRFSEQVGEHSLIKVLTDGMLLNEIQQDR 181 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L QYDT+IIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID +RF+ HF AP+ Sbjct: 182 FLNQYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDHQRFAEHFGGAPV 241 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG-------DILIFMSG 299 +EVSGRT+PVE+RYRP E + + I D + E+ +E D+L+F++G Sbjct: 242 LEVSGRTFPVEMRYRPPAEGQE-----LSRQIEDVLLEIQREERSEGLPMARDVLVFLAG 296 Query: 300 EREIRDTADALNK-----LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS 354 ER+IRD L + +LR EILPLYARLS +EQ+R+F +H GRR+VL+TNVAETS Sbjct: 297 ERDIRDVHHHLKRCATHGSSLRDMEILPLYARLSQAEQHRIFSAHRGRRVVLSTNVAETS 356 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LTVPGI+YVID GTARISRYS +KVQRLP+EP+SQASANQR GR GRV GIC RLY E Sbjct: 357 LTVPGIRYVIDAGTARISRYSVHSKVQRLPVEPVSQASANQRAGRSGRVMPGICFRLYDE 416 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 DDFL+RP FTDPEI RTNL +VILQM+ L LG + FPF+E PD R ++DG RLL+ELGA Sbjct: 417 DDFLNRPAFTDPEIQRTNLGAVILQMSDLRLGKVEDFPFIEPPDGRLVRDGYRLLDELGA 476 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 +T + LT LGRQL++ P+DP L RM++ A + +REA+I+ SAL+ QDPRERP Sbjct: 477 LTEKQ-----TLTALGRQLARFPLDPTLGRMLVAAAEKNVLREALIVVSALATQDPRERP 531 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 DKQQ +D+ H+ F +KESDFL FV LW + Q++ALS N + +L + +L+ R+REW Sbjct: 532 HDKQQQADQAHQPFTEKESDFLFFVKLWQWADAQREALSRNQYEKLLKKTFLSPTRMREW 591 Query: 595 QDIYTQLRQVVKELGIPVN-----------------------SEPAEYREIHIALLTGLL 631 +D + QL + KE G +N S Y +H ALLTGLL Sbjct: 592 RDTHRQLLLLAKEQGWTLNAPIDSGLSLTEPDNANNKSAAKASPSPLYAPLHKALLTGLL 651 Query: 632 SHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEW 691 +++ M+ ++ E+ RN + ++PGS L + +W+M AE VETSRL+ R A+IDP W Sbjct: 652 ANV-MQRTEEGEWLSTRNRKPLVWPGSALSRTKARWLMAAEQVETSRLFARTVAKIDPLW 710 Query: 692 VEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIR 751 VE A HL+KR Y EPHW + +G MA E+V ++GL + + R VNY I P REL IR Sbjct: 711 VEEAAGHLLKRHYFEPHWSKKRGCAMAKEQVNLFGLILASGRGVNYGPIQPVESRELMIR 770 Query: 752 HALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISAR 811 LV G F + N + +E++EHK RRRDILVD+E FYD R+ D+ + Sbjct: 771 EGLVMGHLHREPPFVKANRERFETLEDMEHKLRRRDILVDEEARVAFYDARLPGDIHTVA 830 Query: 812 HFDSWW-KKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 +W+ K+ + E + L + L+ + + +P+ L+L L Y F+P + Sbjct: 831 GLMNWYNKRATAEQKEALFMDDGFLLSRSPD-LGNDQFPDQLKLDGLRLPLEYSFDPTGE 889 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 DGVT+ +PL LNQ+ ES +W +PGL RE + ALI++LPK RR+FVP P+Y A + Sbjct: 890 RDGVTLIVPLAALNQISESRLDWLVPGLLREKLEALIRALPKARRRHFVPVPDYVSALME 949 Query: 931 RVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDD---KNKKLKEGR 987 + P E PLL ++ REL+RM+G+ +++E+W + DHL++ +VVD K L +GR Sbjct: 950 TLSPDE-PLLPAMTRELQRMSGLRIEQEEWQTANLADHLRMFIQVVDRVDGHRKVLAQGR 1008 Query: 988 SLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDE 1047 +L ++KD L V L + G W FG +PES EQ G V+ +PALVD Sbjct: 1009 NLGEVKDRLVS-VTRDLPKPKQETPAVRG-QEWLFGDIPESQEQDLGGMTVRRFPALVDT 1066 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 + V ++ D+ + A G RLL + ++ L ++ A++ + + Sbjct: 1067 GNDVELQFLDDEADAAWAHRWGTARLLGFKLTVQLRDLRKQ---AAQMAGFQKLKTEKGV 1123 Query: 1108 LIDDCISCGVDKLIDAN---GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 + + + +++ + PV +E F R + + ++ Sbjct: 1124 MARQALDHALLRVLAEHFQLHEPVRSEAAFRDRLNDHRGDFVPWAQQQLSIMGKLFAHYR 1183 Query: 1165 NINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLA 1224 + +L+ + A DIK Q+ L + ++ L + R L AI+ RLEKL Sbjct: 1184 QLMGKLEKNFPLAWAHAHRDIKQQLACLFPDDVLLQMPWEWLQEYPRLLAAIDHRLEKLG 1243 Query: 1225 VDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPY 1284 +DR ++E + + +P ++ + +++ WM++E RVS FAQQLGT Sbjct: 1244 GQIGKDRTLSAELEAYSKQHETRAAGVPLWKQSEP-LQQYFWMLQEYRVSLFAQQLGTKL 1302 Query: 1285 PISDKRILQAME 1296 +S KR+ + E Sbjct: 1303 SVSAKRLNKQWE 1314 >UniRef50_C7RBD8 ATP-dependent helicase HrpA n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBD8_KANKD Length = 1311 Score = 1366 bits (3535), Expect = 0.0, Method: Composition-based stats. Identities = 564/1314 (42%), Positives = 802/1314 (61%), Gaps = 38/1314 (2%) Query: 2 TEQQKLTFTAL-QQRLDSLMLRDRLRFSRRLHGV-KKVKNPDAQQAIFQEMAKEIDQAAG 59 + K + L +++ L D+ ++ + K+ K+ + + + + + Sbjct: 16 SSTNKPSIQTLITEQVTQCQLVDQFELNKLKSIITKRQKSNQPVSKLISKAEQILQDSKK 75 Query: 60 KVLLREAARP-EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG 118 V R+ P +I + LPV Q + D+ +AI ++QVV++AGETGSGKTTQLPKIC++LG Sbjct: 76 IVEQRKKLIPGDIEFDMALPVCQARDDVRKAIEENQVVVIAGETGSGKTTQLPKICLQLG 135 Query: 119 RGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGIL 178 G+ G IGHTQPRR+AA +VA RIAEELK+E G +GY +RF+D S T V++MTDGIL Sbjct: 136 LGVYGKIGHTQPRRVAATSVARRIAEELKSELGELVGYSIRFNDQSSAVTPVRVMTDGIL 195 Query: 179 LAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFS 238 L EI D LL QYDTIIIDEAHERSLNIDFLLGY++ +LP+RPDLK+IITSATID ERFS Sbjct: 196 LNEITHDPLLRQYDTIIIDEAHERSLNIDFLLGYIRNILPKRPDLKVIITSATIDVERFS 255 Query: 239 RHF----NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDIL 294 +HF API+E+SGRTYPV+V YRP EE Q++ I A+DEL + GDIL Sbjct: 256 KHFAIDGKPAPILEISGRTYPVDVWYRPDDEENPSP---QVERIGHALDELMSFAPGDIL 312 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH-SGRRIVLATNVAET 353 IF+SGE EIR+TA L K E+LPLYARLS EQ ++F RRI+L+TNVAET Sbjct: 313 IFLSGEAEIRETAKFLRKERFEGCEVLPLYARLSMREQEKIFHPSGGKRRIILSTNVAET 372 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 S+TVPGI++VIDPG ARISRYS R K+QRLPIE ISQASANQRKGRCGRV++G+CIRLY Sbjct: 373 SVTVPGIRFVIDPGFARISRYSVRNKIQRLPIEKISQASANQRKGRCGRVADGVCIRLYE 432 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E+DFL+RPEFTD EILRTNLA+VILQM LGLGDI AFPF++ P + I DG+ LL EL Sbjct: 433 EEDFLNRPEFTDAEILRTNLAAVILQMKQLGLGDIEAFPFIDEPAAKQISDGLNLLSELQ 492 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ +LT +GR++++LP++PRLAR++L A+ C+REA+I+ + LS++DPRE Sbjct: 493 AVD-----GKKQLTNIGRKMARLPIEPRLARILLAAEDESCIREALILAAFLSVKDPREW 547 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P +K++ + +KH ++ +SDF+A +NLW++L +QQ+ LS+NAFRR C+ + +N+ RE Sbjct: 548 PFEKRELAQQKHAKYKHPQSDFIAIINLWDHLHKQQEDLSNNAFRRYCQEELVNFNAYRE 607 Query: 594 WQDIYTQLRQVVK--ELGIPVNSEPAEYRE------IHIALLTGLLSHIGMKDADKQEYT 645 W+ + QL+ +VK SEP + +H LLTGLLS IG KD +K Y Sbjct: 608 WRSTFRQLKSLVKSAHHQTQKQSEPINPDDKVYYAKLHSILLTGLLSFIGQKDIEKG-YL 666 Query: 646 GARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 G R RF I P S FKK P WVM E+VET++ + R+ A I+ W+E + +HLIK Y Sbjct: 667 GTRQTRFMIHPQSANFKKQPPWVMAFEIVETTQNYARLTAMIETPWIETIGKHLIKSHYF 726 Query: 706 EPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAF 765 + HWE+ +GAV+A+ + T+ GL IV+ R V+YS I+P LCRELFI H LV + + RH+F Sbjct: 727 DAHWEKKRGAVVASLQQTLLGLKIVSNRTVDYSSIEPELCRELFILHGLVRRELEPRHSF 786 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 ++N +L +VE+ K+R+ D+ D+ L ++D+R+ + + + + W KK +++ Sbjct: 787 QQDNEQLWLDVEQEIAKARQADMRTDERDLIAWFDKRLPESICNVKQLNQWLKKNAKQNN 846 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 LL K +L K AE+ YP +++L LSY FEPG DGVTV IP L Q Sbjct: 847 QLLTLNKDVLFK--AEEQDASLYPETIQVKSIELPLSYHFEPGHPQDGVTVKIPQSLSQQ 904 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLER 945 ++S FE +PGL E + +++SLPK R+NFVP P +++A +V + L+D + + Sbjct: 905 FKDSDFERLVPGLLEEKIEFMLRSLPKRFRKNFVPIPQFSQACYEQVLEQQGSLIDIISK 964 Query: 946 ELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLS 1005 L +MTGV + +E W +P+H + F +V DK K L GR+L+ + Q + Sbjct: 965 HLFKMTGVILPKEAWQELSLPEHYLMRFEIVGDKGKILTSGRTLEQSQ----ELKQVKVK 1020 Query: 1006 AVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQA 1065 + + ++ W + E + K+ AL D D V I N + + Sbjct: 1021 SKSSHKKKEETFTHWPASFIKEGM-FEEAGTKIPVTYALEDGGDKVRILAVVNKRQAENV 1079 Query: 1066 MWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANG 1125 G+ RLL L + YL +K NK KL L + V E+IDD + L+ N Sbjct: 1080 HVRGVCRLLALEKSQLLSYLKKKYHNKQKLTLSVSTLASVDEIIDDAAMASLKDLVQTN- 1138 Query: 1126 GPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDI 1185 + + FA L +K+ EL ++ + Q+L I + KG + T+A DI Sbjct: 1139 -IPYDKTSFAELSKKMEKELVPATTELLDDLVQVLQLRSRILAQAKG-LGKTLASTRKDI 1196 Query: 1186 KAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQ 1245 Q L GF G ++ D RYL AIEKR+E+ ++P ++ ++ + + + Sbjct: 1197 GNQCDYLFQPGFCFRFGADKIKDFKRYLSAIEKRIERAKLNPLKEAESLIVISDWVDVRE 1256 Query: 1246 QWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 +V E WM+EE R+S FAQ T +PIS KR+ + ++ + Sbjct: 1257 SLAQD---QAIPTFEVDEFNWMLEEFRISLFAQGQKTRFPISAKRLQKFVDDLE 1307 >UniRef50_A0LMI5 ATP-dependent helicase HrpA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LMI5_SYNFM Length = 1309 Score = 1350 bits (3496), Expect = 0.0, Method: Composition-based stats. Identities = 494/1299 (38%), Positives = 748/1299 (57%), Gaps = 68/1299 (5%) Query: 58 AGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 R+ I YP +LP+ + + +IL AI ++QVV++ GETGSGK+TQ+PK+C+E Sbjct: 12 RELHSGRDEPFSPIRYPSDLPIVEHRGEILGAIAENQVVVITGETGSGKSTQIPKMCLEA 71 Query: 118 GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 GRG +G+IG TQPRR+AA T+A+R++EEL +GYK+RF D + +T +K MTDGI Sbjct: 72 GRGARGMIGCTQPRRIAAVTLADRVSEELAETGPRRVGYKIRFHDRTTRSTRIKFMTDGI 131 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE Q DR YDT++IDEAHER+LNIDFLLG +K +LPRRP+LK+IITSATIDP +F Sbjct: 132 LLAEAQSDRHFRAYDTLVIDEAHERTLNIDFLLGLIKRILPRRPELKVIITSATIDPGKF 191 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIV----EEADDTERDQLQAIFDAVDELSQES---- 289 S+ F +APIIEVSGRTYPV+VRYRP EAD + + A DEL Sbjct: 192 SKAFQDAPIIEVSGRTYPVDVRYRPPANGEGPEADAEDITHIDQAVAATDELKGSGQEGR 251 Query: 290 HGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATN 349 GDIL+FM E +IR+T L++ +T ++PL+ R++ ++Q RVF + +I++ATN Sbjct: 252 RGDILVFMPTESDIRETVQRLDEKRYFNTVVIPLFGRMAAADQKRVFLPTTEDKIIVATN 311 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 VAETS+T+P IKYVID G AR+S+Y+ R++ Q LP+ +S+ASA+QRKGRCGRV GICI Sbjct: 312 VAETSITIPRIKYVIDTGLARVSQYNTRSRTQSLPVARVSRASADQRKGRCGRVEAGICI 371 Query: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 RLYS +D+L+RP +T PEILR+NLA VIL+M L LG I FPF++ P ++DG +L Sbjct: 372 RLYSVEDYLARPLYTAPEILRSNLAEVILRMLFLRLGSIQEFPFLDPPSPSAVKDGFAVL 431 Query: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 ELGA+ +LT +GR +++LP+DPRL+RM+L+A++ G V E I+ +ALS+QD Sbjct: 432 RELGAVDEH-----RRLTAMGRVMARLPLDPRLSRMLLQAREEGAVTELTILAAALSVQD 486 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKA------------------ 571 PRERP+DK+ +D+ H F D SDF+ + +W + +A Sbjct: 487 PRERPLDKETQADQAHAVFRDTRSDFVTLLKIWEKCWPRCEAAIASSEARPQDPDRGAAA 546 Query: 572 -----------------------LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 S + R+ CR +L+Y R+REW+D++ ++R++++E+ Sbjct: 547 NGPTRHDVALGTRGENRLVRYASRSQSQLRKFCREHFLSYRRMREWRDVWEEIREILEEM 606 Query: 609 G-IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKW 667 G P NS+PA Y IH ++++G LSHI M+ +K YTG +N + +FPGSGLF + W Sbjct: 607 GGFPENSDPAGYEAIHRSVVSGYLSHIAMR-KEKNIYTGTKNRQVMLFPGSGLFNRGGAW 665 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 V AE+V+T+RL+ R+AA +DPEW+E + HL + T EPHWER +G V A E+VT+YGL Sbjct: 666 VTAAEVVQTTRLFARMAANVDPEWLERLGGHLCRSTVFEPHWERKRGQVTAFERVTLYGL 725 Query: 728 PIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRD 787 P+V RKVN+ + PA R++FIR AL+E D + F N L ++EE+E K+RRRD Sbjct: 726 PVVDRRKVNFGAVRPAEARDIFIRSALIEYDVPKPYGFLDHNRDLVRQIEEIESKTRRRD 785 Query: 788 ILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLD 847 +LVD+ET+F FYD+R+ + R D W K + L +S +++ + Sbjct: 786 LLVDEETVFRFYDRRLPA-ICELRSLDKWIKDHGGD--HFLRMTESDILRTEPDFGELEL 842 Query: 848 YPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALI 907 +P+ +++L L Y F PG + DG+T +P+ +L ++ FEW +PG+ E + L+ Sbjct: 843 FPDRLKLEDVELPLRYAFRPGEEDDGITATVPVHVLPRLAPQSFEWLVPGMLAEKLAILL 902 Query: 908 KSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPD 967 K LPK RR VP A + ++ + L +R + GV+V + W +P Sbjct: 903 KGLPKSQRRQLVPVGETAARLIEMLRRRSGDFHEQLSLCVRELAGVSVPVDQWRRIDLPP 962 Query: 968 HLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPE 1027 HL++ + + L GR L +LK K ++ L A E+ GL WSFG+LPE Sbjct: 963 HLRMRLEITGPEGNLLGVGRDLLELKSLAVEKHEDRLWEQARAAWEREGLTSWSFGELPE 1022 Query: 1028 SYEQKRG--NYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYL 1085 + A+P LV E + A++L+ P E +A GLR L L +KY Sbjct: 1023 RVPIGKDALGLTRYAYPGLVAEGQTAAVRLYAEPEEATRASAGGLRLLFELTFGDELKYF 1082 Query: 1086 HEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAEL 1145 K G E + + +L + + + + F + ++ L Sbjct: 1083 RRDWTFSKKTASMLFFMGGREEAVRCLHDYILRELFELDAPGLPSYGRFYDVVRRLTGRL 1142 Query: 1146 NDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLS-----DIKAQMGGLVYRGFVTG 1200 + +VE ++ + ++ M A + + ++ LV F+ Sbjct: 1143 GAAARALLDEVEAVIGERESTRSEIERYKRMAEANPAAVRCLLGLSRELVTLVPGNFLVQ 1202 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 +G R+ + RYL+A+ R E+ P +DR + ++ ++ ++ ++ E Sbjct: 1203 SGSDRMRELPRYLKALRLRAERAYAAPEKDRLKAGQIAPYEKHLEEMRTRISEHSEESPR 1262 Query: 1261 --VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 +E R M+EE ++S FA ++ T + IS KR+ + +E+ Sbjct: 1263 RLYEEYRTMLEEFKISLFAPEIKTRFRISAKRLDEKLEE 1301 >UniRef50_Q2LSZ0 ATP-dependent helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ0_SYNAS Length = 1282 Score = 1349 bits (3491), Expect = 0.0, Method: Composition-based stats. Identities = 513/1271 (40%), Positives = 752/1271 (59%), Gaps = 35/1271 (2%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 ++ K LR RP +TYP +LP++ ++++I++AI H+VV++ GETGSGKTTQLPK+C+ Sbjct: 15 RSGNKKELRRKNRPRVTYPADLPITARRREIVQAIARHRVVVITGETGSGKTTQLPKMCL 74 Query: 116 ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 E GRGI G+IG TQPRR+AA TVA RIAEEL G +GY++RF D + +++MTD Sbjct: 75 EAGRGINGIIGCTQPRRVAAVTVAERIAEELGQTVGQAVGYRIRFEDRSGPSPYIRIMTD 134 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 GILL E Q D LL YDTII+DEAHER+LNIDFLLGYLK LL +R DLKIIITSATID E Sbjct: 135 GILLMETQSDPLLHAYDTIIVDEAHERNLNIDFLLGYLKTLLRKRNDLKIIITSATIDTE 194 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL--SQESHGDI 293 +F+ F+ AP+IEV+GR YPVEV YRPI + D E ++A AV+EL + GDI Sbjct: 195 KFAAAFDGAPVIEVTGRVYPVEVLYRPIEQGDGDEEITHVEAAVRAVEELRARRSDRGDI 254 Query: 294 LIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 LIFM E++IRDT + L + ILPL+ARLS +EQ R+F + + ++I++ATN+AET Sbjct: 255 LIFMPTEQDIRDTCELLEGRRYENLVILPLFARLSWAEQRRIFSATTAQKIIVATNIAET 314 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLT+PGI+YVID G AR+S+Y+ RT+ LP+ IS++SA+QRKGRCGRV G+CIRLY Sbjct: 315 SLTIPGIRYVIDTGYARVSQYNPRTRTNSLPVRAISRSSADQRKGRCGRVQNGVCIRLYE 374 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E+D+L+RP+F+ PEILR+NLA VIL+M L LG AAFPF++AP+ ++++DG +L+ELG Sbjct: 375 EEDYLNRPQFSVPEILRSNLAEVILRMLKLRLGHPAAFPFIDAPNPKSVRDGFEILKELG 434 Query: 474 AITTDEQAS---------AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 AI+ ++ + +LT GR++++LP+DPR+AR++LEA+K GCV EA II S Sbjct: 435 AISIEKNRNSREEGNGEADVRLTERGRRMARLPMDPRIARILLEAEKEGCVEEATIIASG 494 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL-SSNAFRRLCRT 583 L IQDPRERP+D++ +D HR F D SDFL + +W+ Q+ L S R+ CR Sbjct: 495 LCIQDPRERPVDEEGLADAAHRVFLDPTSDFLTLLRIWDKYQRAQETLKSQGKMRKYCRV 554 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNS--------EPAEYREIHIALLTGLLSHIG 635 +YL++ R+REW+DIY Q+R + +E S IH ++L+G LS I Sbjct: 555 NYLSWRRMREWKDIYEQIRTIRREEEKADRSISKKLAAAPEDLNAAIHRSILSGYLSGIA 614 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 +K +K Y+ R +FPGSGLF W++ AE+VETSRL+ RIAA I EW+E + Sbjct: 615 VK-KEKNIYSATRGREVMLFPGSGLFNSGGNWIVAAEMVETSRLFARIAANISSEWIEEL 673 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 A +L TYSEPHWE+ + V+A ++V+++GL IV RKV+Y+ IDP +F+R ALV Sbjct: 674 AGNLCTSTYSEPHWEKRREEVVAYQQVSLFGLVIVPQRKVSYAHIDPEEASRIFVRSALV 733 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 EG+ +T F N +L AEV +E K RRRD+L D+ L +FY R+ + + R Sbjct: 734 EGELKTPLPFLLYNRQLVAEVIGMEDKIRRRDLLQDESVLNDFYASRLP-GICNVRTLKR 792 Query: 816 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 875 K + L + ++ ++ +P+ G R Y+F+PG DGVT Sbjct: 793 --KIREQGGDAFLRMTPADVLTRLPDEEELSLFPDEVTVGGRSYRCVYRFDPGKADDGVT 850 Query: 876 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL 935 + IP LL V + +W IPG R+ ++AL++ LPK R+ P A+ + + Sbjct: 851 LKIPDVLLPDVPAAAADWMIPGHLRDRILALLRGLPKEYRKKLQPLAGTADYIVKHLGGP 910 Query: 936 ELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDA 995 PLL ++ LR GV + W +VPD L++ F VVD + ++ GR L L+ Sbjct: 911 SGPLLSAVAGLLRERLGVDIPASAWSAREVPDFLQVRFAVVDGEGREKAAGRDLSLLQQT 970 Query: 996 LKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGN-YKVKAWPALVDERDSVAIK 1054 L + A E+S L W FG++PES + +K AWPAL V ++ Sbjct: 971 LTAEQDSRAFEQARRKWEKSDLTAWDFGEIPESIDLHANGSFKGCAWPALTPGDGCVHLR 1030 Query: 1055 LFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIS 1114 L+ E G+ L L +K L + L L + + V + + Sbjct: 1031 LYKTREEAACVHREGIAALYGLYFTRELKELKKALKLTEPLKTWAESFIGVRNMESRLLE 1090 Query: 1115 CGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNI-----NKR 1169 L + V T E F A K+ ++ + + + VE +L A F I N Sbjct: 1091 KVKKDLFAVD---VRTAEDFEAHARKIAGKILISGQEGIRTVEPLLKAWFEIAGDFRNLE 1147 Query: 1170 LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHR 1229 + R + + ++ +M GL+ F+ RL RYL+A++ R E+ ++P + Sbjct: 1148 IVNRGNSGAREFILQLRREMEGLLPADFLCRFDAGRLSHIPRYLKALKIRAERGLLNPEK 1207 Query: 1230 DRAQMLKVENVQQAWQQWINKLPPARREDED--VKEIRWMIEELRVSYFAQQLGTPYPIS 1287 DR + ++ + + + +++ + ++ MIEE +VS FAQ+L T +P+S Sbjct: 1208 DRRRERELLPFVTRHNELVQNMTSGVSDEKQQALADLSLMIEEFKVSLFAQELKTAFPVS 1267 Query: 1288 DKRILQAMEQI 1298 +R+ + + +I Sbjct: 1268 ARRLEEKLNEI 1278 >UniRef50_D2R0M6 ATP-dependent helicase HrpA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0M6_9PLAN Length = 1341 Score = 1337 bits (3462), Expect = 0.0, Method: Composition-based stats. Identities = 524/1341 (39%), Positives = 750/1341 (55%), Gaps = 58/1341 (4%) Query: 9 FTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 + L+QR+D M RDR R L ++ + + + + K R Sbjct: 4 YRQLEQRIDRAMQRDRHRLRNTLRAIQTAEERGQPFDERLAKFLDSLATSEFKREERAQI 63 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 +P + Y +LP++ K +I+ AI H VV+V GETGSGK+TQLPK C+E+GRGI+G IGH Sbjct: 64 KPRLEYDPSLPITAAKDEIIAAIEAHPVVVVCGETGSGKSTQLPKFCLEMGRGIRGWIGH 123 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AAR+++ R+ EEL ++ +G+KVRF D D T+VK+MTDG+LLAE Q DR Sbjct: 124 TQPRRIAARSISARLTEELGSQGSKQVGFKVRFHDSTDDRTLVKVMTDGVLLAETQTDRF 183 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----N 243 L QYDT+IIDEAHERSLNIDFLLGYL LL +R DL++IITSATID ER + HFN Sbjct: 184 LDQYDTLIIDEAHERSLNIDFLLGYLHRLLYKRNDLRLIITSATIDAERIAAHFNHTGSP 243 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREI 303 API++VSGR+YPVE+R+ P EE + + + A+ D+ + L +E+ GDIL+F+ ER+I Sbjct: 244 APIVQVSGRSYPVEIRHEPPAEEQLE-GAELITAVADSTERLLRETRGDILVFLPTERDI 302 Query: 304 RDTADALNKL--NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 R L + +ILPLYARLS ++Q +VF +H+ RRIVLATNVAE+S+TVP I Sbjct: 303 RIAHQVLRGRVASSGAIDILPLYARLSLADQQKVFAAHAKRRIVLATNVAESSVTVPAIT 362 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 V+D GTARISRYS R+KVQRLPIE ISQASANQR GRCGR++ GIC+RL+ E+DF SR Sbjct: 363 AVVDTGTARISRYSPRSKVQRLPIERISQASANQRAGRCGRIAPGICVRLFGEEDFQSRD 422 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 FT PEI RTNLA+V+LQ AL LG + FP ++ P I+DG + L EL AI + Sbjct: 423 PFTSPEIQRTNLAAVLLQSLALDLGPLEEFPLLDVPRSEAIRDGFKTLFELQAIDDKRE- 481 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 LTPLG +L++LPVDP +ARM+L A + + +II +AL +QDPR+RP DK Q + Sbjct: 482 ----LTPLGLKLARLPVDPSIARMLLAASAEHALADVLIIAAALEVQDPRDRPSDKAQEA 537 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 H ++ D +SDFL++++LW++L ++ LS R + ++L+ RVREWQD++ QL Sbjct: 538 SAAHAQWSDPDSDFLSWLHLWDFLHGLKEKLSRGQLRMAMQRNFLSEPRVREWQDVHRQL 597 Query: 602 RQVVKELGIPVNS------------------------------------------EPAEY 619 ++ E G+ V E Y Sbjct: 598 LEMATEQGLQVGKRISPQIPPPHDHEEELQQQPTGRTPQRGRQPGRGSKNEASRVESPAY 657 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL 679 IH ALLTGLL+ I + D EY ++ ++PGSG+ P W++ AELVETSR Sbjct: 658 LAIHRALLTGLLTSIARRT-DTSEYQACGGQKYFLWPGSGVQHSRPAWIVAAELVETSRK 716 Query: 680 WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ 739 + R ARI PEW+E +A HLI + YS+ W +G MA+E++ + GL + A R V + Sbjct: 717 FARSVARIQPEWLEELALHLINKHYSDYRWSEKRGQAMASERLVLAGLTLAADRPVPLAP 776 Query: 740 IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFY 799 IDP+ RELFI L G + A R+N K+ E+ L K+RRRD+++D + L +FY Sbjct: 777 IDPSAARELFIEQGLAAGLLPRKPAVVRDNEKVLEEIARLAAKTRRRDLVIDPQKLVDFY 836 Query: 800 DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL 859 +R+ +VI + WW K + L + L+ + E+ K YP+ L Sbjct: 837 GKRLPREVIDMNSLERWWNKATNLERKTLQLTMNDLLDDEIERDVKTKYPDKLEVPGASL 896 Query: 860 RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV 919 L+Y FEPG ++DGVTV +P ++ + W +PGL E + ALI++LPK +RR + Sbjct: 897 PLAYHFEPGTESDGVTVEVPAAAVSHLSAERLAWLVPGLLAEKIEALIRTLPKDIRRKII 956 Query: 920 PAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK 979 PAP A ++ E LL L +L TG ++ + + ++P HL + RV D + Sbjct: 957 PAPQVAREIASTLRFAEGRLLQVLATKLASHTGDRIEADSFDLTRLPPHLAMNVRVKDAE 1016 Query: 980 NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK 1039 K + R ++K QS L W+FG LP G K+ Sbjct: 1017 GKVITASREWTEVKAVAGPAAAAAAPVATSGRWSQSKLKSWTFGDLPSEVVTTAGGVKLA 1076 Query: 1040 AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF 1099 +PA+VD+ DSV+++L + PL+ + G+RR L + I+ LP AKL ++ Sbjct: 1077 RYPAIVDDGDSVSLQLAETPLQAEALSRGGMRRFLAIEQNREIRGHVSWLPQLAKLRMWS 1136 Query: 1100 NPYGKVLELIDDCISCGVDKLIDAN-GGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQ 1158 P L D + + + + + L D+AK + Sbjct: 1137 APLCSKFPLDDQLQLLIASRALAMGYPDLPRSADTYKLHISMATKHLPAAAQDVAKLLPL 1196 Query: 1159 ILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEK 1218 + A ++ T A L+D+KAQ+ L GF+ + L RY Q I Sbjct: 1197 LFEAYHQARLGIEQFKLSTAAYALADVKAQLAMLTPDGFLAATPWNWLLQFPRYFQGISA 1256 Query: 1219 RLEK-LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFA 1277 RL K LA RD+ VE +Q++W + + + ++E R+ IEELRVS FA Sbjct: 1257 RLRKLLAGGLARDKQNFAGVEKLQKSWSERVERERAQGTAPAALEEFRYSIEELRVSLFA 1316 Query: 1278 QQLGTPYPISDKRILQAMEQI 1298 Q+LGT P+S +R+ + + I Sbjct: 1317 QELGTSIPVSVQRLEKNLAAI 1337 >UniRef50_C7QZ06 ATP-dependent helicase HrpA n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZ06_JONDD Length = 1435 Score = 1333 bits (3450), Expect = 0.0, Method: Composition-based stats. Identities = 595/1396 (42%), Positives = 818/1396 (58%), Gaps = 158/1396 (11%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 A ITYP++LPVS +++ I +A+R+HQV+IVAGETGSGKTTQ+PKI +E Sbjct: 37 AERAQKRSRVDVGTITYPESLPVSAQRERIAQALREHQVIIVAGETGSGKTTQIPKIALE 96 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 LGRG G IGHTQPRR+AAR+VA RIA+EL T+ G +GY+VRF+D S++T+VK+MTDG Sbjct: 97 LGRGRAGQIGHTQPRRIAARSVAERIADELGTQIGKIVGYQVRFTDESSEDTLVKVMTDG 156 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 ILLA+IQ+D L+ YDT+IIDEAHERSLNIDFLLGYL LLP+RPDLK+IITSATID R Sbjct: 157 ILLAQIQRDPQLLAYDTLIIDEAHERSLNIDFLLGYLTNLLPQRPDLKVIITSATIDSAR 216 Query: 237 FSRHFN-------------------NAPIIEVSGRTYPVEVRYRPIVEEA---------- 267 F+ HF AP+IEVSGRTYPVE+RYRP+ EA Sbjct: 217 FAEHFASPGPNGERGPDAVASGLATPAPVIEVSGRTYPVEIRYRPLDGEALGVADGQGNR 276 Query: 268 DDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK---------LNLRHT 318 + + D + ++ A DEL E GDIL+F+SGER+I D DAL + +T Sbjct: 277 SNDDPDLMTSLCAATDELMLEGPGDILVFLSGERDIHDAHDALTAHLGARATDPRDPGYT 336 Query: 319 EILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 378 EI+PL+ARLS +EQ+R+FQSHS RRIVLATN+AETSLTVPGI+YVIDPGTARISRYS T Sbjct: 337 EIVPLFARLSAAEQHRIFQSHSHRRIVLATNIAETSLTVPGIRYVIDPGTARISRYSKTT 396 Query: 379 KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVIL 438 KVQRLPIEPISQASANQR GRCGRV+EGI IRLYS++DF +RPEFT+PEILRT+LASVIL Sbjct: 397 KVQRLPIEPISQASANQRSGRCGRVAEGIAIRLYSQEDFQARPEFTEPEILRTSLASVIL 456 Query: 439 QMTALGL----GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLS 494 M ++G+ DIA+FPFV+ PD + ++DGV LL+EL A+++ ++ + LTP+GRQL+ Sbjct: 457 HMVSVGVVRTPDDIASFPFVDPPDTKAVRDGVALLQELSALSSGKRGTT--LTPVGRQLA 514 Query: 495 QLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESD 554 LP+DPRLARM++EA + G E +II +ALSIQDPRERP + + +D HRRF + SD Sbjct: 515 ALPIDPRLARMIVEANRRGVAGEVLIIAAALSIQDPRERPAEVRDEADTCHRRFVEGRSD 574 Query: 555 FLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS 614 FL ++N+W Y+ QQKALSS+AFRR+CR +YLN+LR+REWQD+ +QLR + + LGI V Sbjct: 575 FLTYLNMWEYVRSQQKALSSSAFRRMCRREYLNFLRIREWQDVVSQLRDMARPLGITVTH 634 Query: 615 EPAEY---------------------REIHIALLTGLLSHIGMKDAD------------- 640 A+ IH ++L GLLS IGM+++ Sbjct: 635 RSAQPVGDALTTSEDTSVDTRFVWDGEAIHRSILAGLLSQIGMQESTDVSATRKGKDAAQ 694 Query: 641 --------KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + EY G+R +F+IFPGS L +KPP WVM A+LVETSRLW R A I+PEW Sbjct: 695 DRRAARMARNEYLGSRGTKFAIFPGSSLSRKPPTWVMAAQLVETSRLWARDVAAIEPEWA 754 Query: 693 EPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRH 752 E +AQ ++KRTYS+P W +GA M EKV +YG+PIV R + YS +D R++FIRH Sbjct: 755 EELAQGIVKRTYSDPAWSTKRGAAMVREKVMLYGVPIVTERPILYSHVDRDAARDMFIRH 814 Query: 753 ALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARH 812 ALV+G W T HAF+R N + AEVEE ++R + VDD L+EFYD R+ V+SA H Sbjct: 815 ALVDGQWTTHHAFWRHNKAVIAEVEEFYARTRATQLEVDDTVLYEFYDARLPDSVVSAAH 874 Query: 813 FDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADAD 872 FD WWK + P LL+ + L+ ++ YP W QG+L ++Y + PG D Sbjct: 875 FDRWWKDTRKTEPTLLDLHRDDLLPAVDDEQVDALYPTSWPQGDLTFPITYSYTPGHSTD 934 Query: 873 GVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV 932 G+TVHIP+ +LN+VE GF+W +PGL EL IA IKSLPK RR VPAP+ A A + Sbjct: 935 GLTVHIPIEVLNRVEAGGFDWLVPGLLTELCIATIKSLPKTWRRQLVPAPDTARAIATWL 994 Query: 933 KPLELP-------------LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVD-- 977 + + V + + + +P H++I F V Sbjct: 995 TERHPSWADLVRGGNHAPQFHAEFTQAAYALRSVDIPADAYTPHTLPPHVRIMFSVEHTV 1054 Query: 978 DKNK-----KLKEGRSLQDLKDALKGKVQETLSAVADDGIEQ------------------ 1014 ++ + L + SL+ L+ L QE +++ + Sbjct: 1055 NRGRRTVTEVLDQSPSLEHLQRTLSSHAQEAVASAVHTAVSAALAEARAAATPTPVPTGS 1114 Query: 1015 -----------------------------SGLHIWS--FGQLPESYE-QKRGNYKVKAWP 1042 + W + +P + G + V+ +P Sbjct: 1115 TTTPRTPVRAQHHASTSTPPPAPALADSSDIVTDWPTAYPTIPLILDGTGPGGFAVRGYP 1174 Query: 1043 ALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPY 1102 AL D V + + + +Q + L++ + + + L + +PY Sbjct: 1175 ALAVHPDGVRLDVLAHDAQQATIHGQAVVELVVAATALSTSRISTRWSPRQALVMSTSPY 1234 Query: 1103 GKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTA 1162 LI D + L+ + G + + + +VRA + D IA V LTA Sbjct: 1235 PTTDALITDLQRAAIRSLL-PDAGTIRDVDTYRERVVQVRARIEDETYRIAGDVAAALTA 1293 Query: 1163 VFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEK 1222 V +++ +K + + L+DI+A L+Y GF++ + +RY++A RL+K Sbjct: 1294 VKDLDAAIKQHTSLALLATLNDIRAIRDALIYPGFISRTPPDHVRHLVRYVRAQIHRLDK 1353 Query: 1223 LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARR-EDEDVKEIRWMIEELRVSYFAQQLG 1281 HRD+ ++ V + + + + E + ++RWMIEELRVS +AQQLG Sbjct: 1354 AVDSVHRDQEVSWRLAEVTRMYDAAVASASASPHGVSEQLADVRWMIEELRVSMYAQQLG 1413 Query: 1282 TPYPISDKRILQAMEQ 1297 T +S+KR+L+A+ Sbjct: 1414 TARTVSEKRVLKAITA 1429 >UniRef50_A8ZWI2 ATP-dependent helicase HrpA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWI2_DESOH Length = 1307 Score = 1330 bits (3442), Expect = 0.0, Method: Composition-based stats. Identities = 486/1314 (36%), Positives = 735/1314 (55%), Gaps = 32/1314 (2%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAK---EIDQAAGKVLL 63 + A + + + DR RRL + + P + A+ +E+++ ++ + Sbjct: 4 NSIKAAYRLANQALRVDRQYALRRLSAISGGRRPLSGPALEREVSQLIARLEGSVALRAF 63 Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R P + LP++ ++ +I+ AI+ H VVIV+G TGSGKTTQ+P+ C+ G G G Sbjct: 64 RYDRFPRLPSDPALPIAPRQDEIIAAIQKHPVVIVSGATGSGKTTQIPRYCVAAGCGRDG 123 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 IG TQPRR+AA +VA RIA+EL T G +G+K+RFSD + ++K+MTDGILLAE Q Sbjct: 124 RIGCTQPRRIAAVSVAARIADELGTASTGLVGHKIRFSDTTAGTHLIKIMTDGILLAEAQ 183 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 +DR L +YD I++DEAHERSLNIDF+LG LK++L +R DL+++ITSATID E+FS F+ Sbjct: 184 RDRYLNEYDAIVVDEAHERSLNIDFILGILKQVLAKRDDLRVVITSATIDTEKFSAAFDQ 243 Query: 244 APIIEVSGRTYPVEVRYRPI-VEEADDTERDQLQAIFDAVDELSQESH-GDILIFMSGER 301 AP+IEVSGR YPVE++Y P E + ++ V+ + + S GDIL+FM + Sbjct: 244 APVIEVSGRMYPVEIKYTPPEPEFGNGEPPTYVELAVAEVERVCRRSPFGDILVFMPTAQ 303 Query: 302 EIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 +IR+T D + + ++PL+ARLS ++Q RVF GR+I++ATN+AETS+T+PGI+ Sbjct: 304 DIRETCDMIEGRRMPGATVMPLFARLSGADQARVFSRPPGRKIIVATNIAETSITIPGIR 363 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YV+D G ARIS Y+ RT+ L + ISQ+S QR GRCGRV G+C+RLY + DF SR Sbjct: 364 YVVDTGLARISYYNPRTRTTSLSVRSISQSSCQQRAGRCGRVENGVCVRLYDQKDFESRH 423 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 FT PE+LR NLA V+L+M AL LG FPFV+ P R+I+DG L ELGAI + Sbjct: 424 LFTPPEVLRANLAEVVLRMMALKLGTPDTFPFVDRPADRSIRDGYDTLVELGAIQAVSRG 483 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 Y+LT GR ++++P DPRLAR+++EA K+GC+ A+++ SALS+QDPRE P ++ + + Sbjct: 484 G-YRLTETGRLMAKIPADPRLARILIEAGKNGCLEPAVVVVSALSMQDPRETPAERLKEA 542 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 H F SDF+ +N+W E + + +R CR +L++ R+REW+D+Y Q+ Sbjct: 543 RAAHAAFAHPASDFITLLNIW----EACRDKGTGQLKRFCRDHFLSFRRMREWRDLYAQM 598 Query: 602 RQVVKELG--------IPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 +Q+ KE G Y H LL+G LS+I K +K Y GA Sbjct: 599 QQIAKEHGLGTGLAAIDRHQDPDGFYAAFHRTLLSGYLSNIAEK-KEKNIYNGAGGKTMM 657 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 IFPGS LF P +M AELVETSRL+ R A ID +W+ P+A L + TY P W R++ Sbjct: 658 IFPGSALFNTEPSMIMAAELVETSRLYARTVAAIDRQWIRPLAGDLCRETYLAPRWRRSR 717 Query: 714 GAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLR 773 V+A + T++GL + V+Y ++DPA ++FIR ALV GD + +F N +L Sbjct: 718 EEVVADCRTTLFGLTVDFRESVSYGRVDPAGAADIFIRSALVNGDVKQPLSFMAHNTRLI 777 Query: 774 AEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKS 833 E E+E++ RR+ L D+ LF FY QR+ +DV S R K+++ + D L ++ Sbjct: 778 EEGVEIENRLRRKTFLAGDDDLFAFYRQRLDNDVYSMRTLK---KRIAEQGVDFLKMSRA 834 Query: 834 MLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEW 893 +IKE + +P+ H G + Y F+P D DGVTV IP V+ +W Sbjct: 835 DVIKEEPDPEEMAGFPDTLHLGREQFACLYAFDPAKDEDGVTVRIPAHRAPDVDPDHLDW 894 Query: 894 QIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGV 953 +PGL E + AL+K LPK R+ VP E + + PL+ +L +R+ GV Sbjct: 895 LVPGLLTEKIAALVKGLPKAYRKQLVPISRTVEIITTEMPQRKRPLVSALSLFIRKRFGV 954 Query: 954 TVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIE 1013 V W +++P+HL + D++N++++ R+ L+ + + A E Sbjct: 955 EVPASAWQPEKLPEHLHARIAITDERNREIEVSRNRDILRQSFDQGLPADSLAPLKRQWE 1014 Query: 1014 QSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRL 1073 ++G W FG LPE G ++ +P LVD V ++LF++ + A G++RL Sbjct: 1015 KTGCRTWEFGDLPEEIVADAGKRHIRLFPGLVDRTGHVDLRLFESRSKALAAHVQGVKRL 1074 Query: 1074 LLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEG 1133 LLL + +++L + + L G L D L+ + + T Sbjct: 1075 LLLALSREVRFLGRDVALSKQAALKAVLLGGAKSLEQRMQQKVADNLLAVS---IRTAAE 1131 Query: 1134 FAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLK-----GRVDMTMALGLSDIKAQ 1188 F AL +V L + + VE ++ A + ++++ R AL L I+A Sbjct: 1132 FEALAIEVPGRLYERAHQLRTAVETVVGAYHDARRQIQTLVASQRAGGDTALVLKTIEAD 1191 Query: 1189 MGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI 1248 + LV FVT L RY+QA R + + DR + KV + + Sbjct: 1192 LATLVPETFVTIYHIADLERLPRYMQAAVIRARRAVENLAGDRQKAEKVAWSCAVLDRLV 1251 Query: 1249 NKLPPARREDE--DVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 +L P +++ V++ WM+EE +VS FAQ+L T +P+S KR+ + + +I G Sbjct: 1252 AELLPDTSDEKRRAVEDFFWMVEEYKVSVFAQELKTAFPVSKKRLEENLREIEG 1305 >UniRef50_Q6A8Y5 ATP-dependent helicase HrpA n=3 Tax=Propionibacterium acnes RepID=Q6A8Y5_PROAC Length = 1361 Score = 1327 bits (3436), Expect = 0.0, Method: Composition-based stats. Identities = 580/1359 (42%), Positives = 798/1359 (58%), Gaps = 143/1359 (10%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +T+ +LP++ +I + I+ HQVV+VAGETGSGKTTQLPKIC+ LGR I HTQP Sbjct: 16 VTFDTDLPIAAHADEIADLIKHHQVVVVAGETGSGKTTQLPKICLALGR---RQIAHTQP 72 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AAR+VA R+AEE+ E G +GY+VRF+ S +T + +MTDG+LLAEI DR L Sbjct: 73 RRIAARSVAERVAEEMGVELGEQVGYQVRFTRRASSDTALTVMTDGVLLAEISHDRDLCA 132 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 +DTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID RFS HF++AP+IEVS Sbjct: 133 HDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTARFSAHFDDAPVIEVS 192 Query: 251 GRTYPVEVRYRPIVEEA----------------------------DDTERDQLQAIFDAV 282 GRTYPVEVRYRP+ DD DQ+ I AV Sbjct: 193 GRTYPVEVRYRPLDPSEQIRPDDEDDIDDEDELLHRPSAPSLTSPDDEVVDQVTGICRAV 252 Query: 283 DELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGR 342 EL +E GDIL+F++GE+EIR+TA+AL LNL +TE+LPL+ARLS +EQ+RVF H+GR Sbjct: 253 QELCREESGDILVFLAGEQEIRETAEALADLNLSNTEVLPLFARLSAAEQHRVFTPHTGR 312 Query: 343 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGR 402 RIVLATNVAETSLTVPGI+YVIDPGTARISRYS RTKVQRLPIEP+SQASANQR GRCGR Sbjct: 313 RIVLATNVAETSLTVPGIRYVIDPGTARISRYSVRTKVQRLPIEPVSQASANQRAGRCGR 372 Query: 403 VSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 V+ GICIRLYS+ F SRPEFT+PEILRTNLA+VILQM LG I FPFVEAPD+ I Sbjct: 373 VAPGICIRLYSQTSFESRPEFTEPEILRTNLAAVILQMAQARLGAITDFPFVEAPDRSRI 432 Query: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIIT 522 DG+RLL+ELGA+ A +LT +G QL+++P+DPRL RM+LE + G + E ++I Sbjct: 433 NDGIRLLDELGALKP-GHRDASRLTKIGHQLARVPLDPRLGRMLLEGARQGSLAEVLVIV 491 Query: 523 SALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV-------NLWNYLGEQQKALSSN 575 +ALSI+D RERP DK++ +D HRRF + + N + ++ Sbjct: 492 AALSIRDVRERPADKREEADAFHRRFATEANLLQTLQAADNTDNNQVGDWSQVRRQHIHQ 551 Query: 576 AFRRLCR------------------------TDYLNYLRVRE-WQDIYTQ---------- 600 + + + + + W+ + Q Sbjct: 552 EAANTAKPGPPARHTPHTRGKISPRPQAGGIDEGGDIMAIHRLWRYLRHQRRQMGSSAFR 611 Query: 601 ----------------------LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI---- 634 LRQ+ KEL + VN A + +ALL+GLLSHI Sbjct: 612 RMCRAEYINYLRVREWDDLHGQLRQIAKELHLEVNRTSAPTDRVLVALLSGLLSHIGLVQ 671 Query: 635 ----GMK---DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 + QEY GAR +F+I PGS L +K P+ V+ ELVETSRLW R A + Sbjct: 672 VRQPAKRHGQRPGPQEYLGARGTKFAINPGSLLARKSPELVVAVELVETSRLWARTVAAV 731 Query: 688 DPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRE 747 PEWVE VA LI+R+++ PHW + +V+ATE+ T++G+P+ A R+V Y +IDP R+ Sbjct: 732 QPEWVEEVAGPLIRRSWAVPHWAASTASVVATERGTLFGVPLWADRRVTYGRIDPVASRQ 791 Query: 748 LFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDV 807 +FIR ALVE +W++ H F + N ++R E +LE +SR+R ++ DD+ +F FYD+RI + Sbjct: 792 IFIRSALVERNWRSDHGFLKHNDRVRDEAADLEERSRQRGLVADDDAIFAFYDRRIPDGI 851 Query: 808 ISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEP 867 +S HFD+WW++V + L+ L+ + + +P+ W GNL+L + Y FEP Sbjct: 852 VSGSHFDAWWRRV--QDRHQLDLSIDDLV--DSGSVDADAFPDHWKVGNLELPVRYVFEP 907 Query: 868 GADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA 927 G+ DGVTV IPL LLNQV + F WQ+PGLR EL LI++LPK +R VPAP+ A A Sbjct: 908 GSGHDGVTVTIPLALLNQVPTAPFSWQVPGLRTELATELIRALPKRIRTQLVPAPDRARA 967 Query: 928 FLGRVKPLE----LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNK-- 981 L ++ + P + L R LR +TGV ++ +DW+ +P HL+I F + D + + Sbjct: 968 ALTWLEDHDADRHAPFTNELGRALRTLTGVIINPDDWNIAAIPAHLRIGFDITDAEGRPV 1027 Query: 982 ------------------KLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFG 1023 + L L+ L KV ++L+ A + G W+F Sbjct: 1028 GKKSKKNGKDKLKGSQPAPIARSEDLDALQTDLAPKVSQSLTKAAGQ-PQIHGAKEWTFD 1086 Query: 1024 QLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIK 1083 +P+ + R +P LVDE DSV + D P Q+ + +G+ +LL+LN+P P K Sbjct: 1087 PIPKRVDLSRKGPDAVGYPCLVDEGDSVGTTVLDTPRAQRTSHASGVVKLLVLNLPDPTK 1146 Query: 1084 YLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP---VWTEEGFAALHEK 1140 ++ + N KL L +PY V L+ D V + G + ++ F L Sbjct: 1147 WVVTHMDNATKLALATSPYPSVPALLADARHKAVASVAQEKAGDLSGIRDKKTFDDLALV 1206 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 VR + D + + + +IL+ V + L D + +DI AQ+ LV+ F++ Sbjct: 1207 VRQDQADRMARVVRTAGRILSRVVAARQALATVSDPAIH---ADIVAQIDDLVFENFISA 1263 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 D R++Q + R+E L +P RD QM ++E + + + P + + Sbjct: 1264 TPDPWYDDMPRWIQGVSVRIESLMTNPSRDPRQMAELEPLLADYDALCEEQPAGK-LPAE 1322 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 V+EI +M+EELRV YFAQ+LGT +S KRI A+ ++S Sbjct: 1323 VEEIGFMLEELRVQYFAQKLGTRVSVSPKRIRMAIAKLS 1361 >UniRef50_C8N990 ATP-dependent helicase HrpA n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N990_9GAMM Length = 1310 Score = 1320 bits (3417), Expect = 0.0, Method: Composition-based stats. Identities = 547/1313 (41%), Positives = 765/1313 (58%), Gaps = 54/1313 (4%) Query: 19 LMLRDRLRFSRRLHGVK-KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNL 77 ++ RDR + ++ + + + A E + V +R AA P+ +L Sbjct: 19 VLCRDRHALRQLHRQIRERERRGQPADRLRARFAAEYAASTAAVEVRRAALPQPKLSADL 78 Query: 78 PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAART 137 PV K DIL IR+HQVVI++GETGSGKTTQLP++C+ LG G +G I HTQPRR+AAR+ Sbjct: 79 PVLAAKNDILRLIREHQVVIISGETGSGKTTQLPQLCLALGLGARGTIAHTQPRRIAARS 138 Query: 138 VANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIID 197 VA RIAEEL T G +GY+VRF + SD T++KLMTDG+LLAE D L QY+ II+D Sbjct: 139 VAARIAEELDTPLGDAVGYQVRFDEKTSDATVIKLMTDGMLLAETLSDPYLAQYEVIIVD 198 Query: 198 EAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVE 257 EAHERSLNIDFLLGYL L RRPDLKIIITSATID E+F+ HF AP++ VSGRTYPVE Sbjct: 199 EAHERSLNIDFLLGYLHRLAARRPDLKIIITSATIDAEKFAAHFGGAPVLNVSGRTYPVE 258 Query: 258 VRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRH 317 +RYRP + D AI AV EL Q DIL+F+ ER+IR+ AD L + LR Sbjct: 259 IRYRPP-----GEDEDTADAILRAVAELDQHGRNDILVFLPSERDIREAADRLRREQLRD 313 Query: 318 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 T++LPL+ RLS ++Q VF+ + RRIVLATNVAETSLTVP IK VID GTARISRYS R Sbjct: 314 TDVLPLFGRLSLADQQAVFRPQAPRRIVLATNVAETSLTVPRIKAVIDTGTARISRYSLR 373 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 TK QRLPIEPISQA+ANQR GRCGRVS GICIRLYSE+D+ RP +T+PEILRTNLA++I Sbjct: 374 TKTQRLPIEPISQAAANQRAGRCGRVSSGICIRLYSEEDYAQRPAYTEPEILRTNLAAII 433 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 LQM L LGDIAAFPFV+APD+R I DG RLL EL A A +LTPLGR +++LP Sbjct: 434 LQMLVLKLGDIAAFPFVDAPDERQINDGYRLLYELQATDE-----ARRLTPLGRHMARLP 488 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 VDPR AR+++ A+K GC+++A+I+ +ALSIQDPRERP ++ +D+K F DK SD+ Sbjct: 489 VDPRFARILVAAEKSGCLQDALILVAALSIQDPRERPFGQEARADQKQGEFADKSSDYQT 548 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS--- 614 +NL+ ++++ S+N R+ C+ YLN R+REW+++ QL + +E + ++S Sbjct: 549 LLNLFAAYQRERRSASNNRLRQWCKNYYLNPQRMREWRELVNQLLRDSREQKLHLDSAHP 608 Query: 615 -----------------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 E + +H ALLTG L +G+ D ++Y R++RFS+FP Sbjct: 609 AAPKNDLPDGAKGWLALENPQIETLHRALLTGFLDQVGLWDEQNRDYLRPRHSRFSLFPA 668 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVM 717 S L KKPP+ VM A +VET R + R A I +E +A HLI+ YS PHW + G V+ Sbjct: 669 SVLAKKPPQAVMAASIVETQRTYARTCAPIQLAELEHLAAHLIRHQYSNPHWSKKAGNVL 728 Query: 718 ATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVE 777 A++ T+YGLPIVA R V Y++ DPAL E+FI ALV G+ TR +N L +E Sbjct: 729 ASQTTTLYGLPIVAGRNVPYARHDPALAHEIFIHDALVPGELNTRLKVIAQNRALIETLE 788 Query: 778 ELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK 837 E EHK+R R IL D+ FY +R+ V S + W KK L ++ L+ Sbjct: 789 EREHKTRSRGILADESQQAAFYMERLPETVHSVVTLEQWAKKHGEA---ALAMREADLLL 845 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 E I + DYP KLRL Y F+PG ADG+TV+IPLP LN ++ FE +P Sbjct: 846 SD-ETIDEADYPTSLTINGQKLRLEYHFDPGGAADGITVNIPLPALNALDARAFERLVPA 904 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDR 957 + + AL+++LPK RR VP P +A+A R+ + PL ++ + + G + Sbjct: 905 MLPAKIEALLRALPKVWRRQLVPIPAFAQAVSERIAGDDAPLHTAIRAAVYAIKGTAIPE 964 Query: 958 EDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQS-G 1016 + + +++ DH ++ +R++D KN+ L E R L L+ + Sbjct: 965 DAFDENKIDDHHRMNYRLLDAKNQPLAESRDLAALQAEYSDSAAAQFRRRSQSRHADDAP 1024 Query: 1017 LHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLL 1076 + W + +LP G + +PAL E ++L D+P A + LL Sbjct: 1025 ITDWQWDELPAQETLPNG---ITGYPALTLEDGKHYLRLHDDPERAASAHHAAVHALLAD 1081 Query: 1077 NIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAA 1136 + + IKYL + LP ++ L++ G L DD I+ + + GG T + A Sbjct: 1082 KLQAKIKYLRKNLPGYTQMALHYRKIGSDSTLADDIIARLLAHVCLQ-GGVPRTRAAWEA 1140 Query: 1137 LHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRG 1196 + EL ++A ++ +IL A + ++L ++ SDI+A + L+Y Sbjct: 1141 ALARGERELIPAASELATKLTRILAAYSDAKQQL---HNLKQPAIKSDIEAHLARLIYPE 1197 Query: 1197 FVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARR 1256 F+ + + L R L A KR+EK +DP +D + ++ + + QQ + K R Sbjct: 1198 FIRDSDSRDLDLIDRALAATLKRIEKARLDPLKDLQRQQELASWEATLQQTLAKHGMTRA 1257 Query: 1257 -----------EDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + + + E R+ +AQ+LG+P S KR+ +A E++ Sbjct: 1258 SQTPPRGTPASTRAALLDYWRLTEAWRIQTYAQELGSPLKASPKRLQEAAEKL 1310 >UniRef50_A5WE54 ATP-dependent helicase HrpA n=4 Tax=Moraxellaceae RepID=A5WE54_PSYWF Length = 1438 Score = 1319 bits (3413), Expect = 0.0, Method: Composition-based stats. Identities = 549/1420 (38%), Positives = 792/1420 (55%), Gaps = 144/1420 (10%) Query: 4 QQKLTFTALQQRLDSLMLRDRL---RFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 KL + L ++ +DR R R L K +P + + ++ Sbjct: 38 SSKLAVFESMKELP-VLAKDRHFLSRLQRELSRPPKNADPKVLADKQAKFEQIKQRSQHV 96 Query: 61 VLLREAARP---EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 V R + P D LPVS++ DI++AI DHQV+IVAGETGSGKTTQLPK+ M Sbjct: 97 VQQRIDSIPHNLPQLLNDELPVSKRSTDIIQAITDHQVIIVAGETGSGKTTQLPKLAMLA 156 Query: 118 GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 GRGI G IGHTQPRRLAAR+VANRIAEEL G + +K+RF++ S ++VKLMTDGI Sbjct: 157 GRGITGQIGHTQPRRLAARSVANRIAEELGEPLGETVSFKIRFNEQGSAQSVVKLMTDGI 216 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE+ DR L +YDTIIIDEAHERSLNIDF++GYLK+LLP+RPDLK+IITSAT+D RF Sbjct: 217 LLAELGHDRFLTRYDTIIIDEAHERSLNIDFIMGYLKQLLPKRPDLKVIITSATLDTGRF 276 Query: 238 SRHFN----------NAPIIEVSGRTYPVEVRYRPIVEE---------ADDTERDQLQAI 278 S +F AP+I+V GR YPVEVRYRP+ + DD E + +A+ Sbjct: 277 SEYFAQYDPVKKRMVPAPVIDVEGRGYPVEVRYRPLTDTPVSSSDDDSYDDFEDNLPRAV 336 Query: 279 FDAVDELSQE-------SHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSE 331 AV+E ++ H DILIF + E EIR+ + L + RHTE+LPL+AR + +E Sbjct: 337 VAAVEECFEDAIAKGHPEHADILIFAATEAEIREMQEVLVQHGPRHTEVLPLFARQTYAE 396 Query: 332 QNRVFQSHS-GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 Q R+FQ GRRIV+ATNVAET+LTVPGI+YVID G ARISRYSYR++VQRLPIE ISQ Sbjct: 397 QQRIFQPSGRGRRIVIATNVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQ 456 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA 450 A+ANQRKGRCGRV+ G+CIRLYSE+DF SRPEFT+PEILRTNLASVILQM +L LG + + Sbjct: 457 AAANQRKGRCGRVAPGVCIRLYSEEDFASRPEFTEPEILRTNLASVILQMASLRLGTVES 516 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQA----------SAYKLTPLGRQLSQLPVDP 500 F F+E PD R ++DG +LL+ELGA+T + KLT +G++++++P+DP Sbjct: 517 FDFIEPPDSRLVKDGRKLLDELGALTPKNSDSKKPVAKQTLNDVKLTRIGQKMARMPIDP 576 Query: 501 RLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 RLARM++ C+ E +II +AL++QDPRERP +K+ +D+KH F ++SDFL +++ Sbjct: 577 RLARMLVAGSDFDCMLEMLIIVAALAVQDPRERPAEKRAQADQKHAIFRQEDSDFLFYLS 636 Query: 561 LWNY-LGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE- 618 LWN G LSS+ + + YL++ R+REW+ Y QL Q+V +L + +S Sbjct: 637 LWNALYGGGSNKLSSSQRKSFAKKHYLSFPRLREWEKTYRQLEQMVTDLKLLTDSGTEHK 696 Query: 619 ------------------------------------------------YREIHIALLTGL 630 Y +H ALLTGL Sbjct: 697 DKPHTQNDAAKGQRHANQAVTVAKSVATDLIVDNASDNKVNEAQRAVKYANLHRALLTGL 756 Query: 631 LSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPE 690 LS I K + EY AR + IFP S +FK+ P WVM E+VETS+++ R A+I+PE Sbjct: 757 LSVIAHKTDQRGEYLAARQQKAKIFPASTVFKQVPAWVMAFEIVETSQVFMRTVAKIEPE 816 Query: 691 WVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI 750 W+ +L+K Y EPHW + G V A +++++GL +VA + NY QI+ RE+FI Sbjct: 817 WIISAGGNLLKYHYFEPHWSKKTGRVRAYAQISLFGLIVVAKQLTNYEQINLEESREIFI 876 Query: 751 RHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISA 810 R LV G+ + F + N+ A+VE +E K RRRD+LVD+E L++FY+++I + S Sbjct: 877 RDGLVTGNLGRQAPFLQHNMDKIADVERIEEKLRRRDLLVDEEDLYQFYERKIPEHIASR 936 Query: 811 RHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGAD 870 + F+ W V ++ P L F ++KE A + ++P W G+LKL L Y F+P ++ Sbjct: 937 KAFEDWRADVEKDDPKFLFFTDEDVLKETAP--TTGEFPEVWQLGDLKLPLKYVFDPASE 994 Query: 871 ADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLG 930 DGVT+ +PL L Q++ W +PG R ELV+ L+KSLPK +RR VP PN A++ Sbjct: 995 DDGVTIRVPLAALPQLDAIELLWGVPGWRYELVLQLLKSLPKEIRRKIVPIPNTADSLYD 1054 Query: 931 RVK-PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSL 989 ++ + LL+ L + L+R + V ED++ + +L+ VVDDK + +++GR L Sbjct: 1055 ELEKNHQQGLLNQLCQALQRRGVLGVKPEDFNPSAIDRYLQPQICVVDDKKRVIEKGRDL 1114 Query: 990 QDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKR----GNYKVKAWPALV 1045 + L+ K + LS+ D G+H PE + + +K + ALV Sbjct: 1115 KALQQRHASKTSQALSSSQDT----QGVHT----SFPEHFRFSKNRHSAGIVMKEFSALV 1166 Query: 1046 DE--RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYG 1103 + ++V I F + +A G+ L+ + + K L ++ KL F P G Sbjct: 1167 ADEAGEAVTIHQFTDVTAALKAHRKGVLTLIRSKLGAKQKQLTSQIDKTFKLA--FAPLG 1224 Query: 1104 KVLELIDDCISCGVDKLIDANGG-----------------------PVWTEEGFAALHEK 1140 + +L + +D ++A + F EK Sbjct: 1225 DMEKLKTIVVDATLDATLEAYAPSFQDHDEALPDNADKVAEKLANQLPLDDTEFEKTSEK 1284 Query: 1141 VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG 1200 V A + + + + I + L + DI+ Q+ L FV Sbjct: 1285 VLANFLLEGQKVLRLLRDVYARWQRIRRSLLMLDRDVFGESIDDIEDQLDDLHLSDFVYR 1344 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 ++ RYL+A+E R+E+L + D + +++ + R +DE Sbjct: 1345 MAYEDWQQYPRYLEALEIRIERLEHNLDGDLDAVYELDVHMERL--------AGRADDES 1396 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 + + RW++EE R+ FAQ + T +S KR+ + EQ++ Sbjct: 1397 ISDYRWLVEEFRIQLFAQPMKTRQSVSQKRLNKMWEQVNA 1436 >UniRef50_C8QXF3 ATP-dependent helicase HrpA n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXF3_9DELT Length = 1312 Score = 1316 bits (3407), Expect = 0.0, Method: Composition-based stats. Identities = 495/1300 (38%), Positives = 751/1300 (57%), Gaps = 69/1300 (5%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 PE++ P LP++ +++I+ AI H VVI+AGE GSGKTTQ+PK+C+ GRG + I Sbjct: 13 NTTPELSCPAELPIADFREEIIAAIISHPVVIIAGEPGSGKTTQIPKMCLAAGRGRQQKI 72 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AA ++A R+ +EL +GY++RFSDH S T VK MTDGILLAE Q D Sbjct: 73 GCTQPRRIAAISMAARLRDELGPAGEVLVGYRIRFSDHTSRATRVKFMTDGILLAETQHD 132 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 R L YDTII+DEAHERSLNIDFLLG LKELL RRPDLK+IITSATID E+FSRHF+ AP Sbjct: 133 RQLADYDTIIVDEAHERSLNIDFLLGILKELLKRRPDLKVIITSATIDTEKFSRHFDKAP 192 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERD---QLQAIFDAVDE-LSQESHGDILIFMSGER 301 +I+V+GRT+PVEVR++P E + + D + AV E ++ E GDIL+FM ER Sbjct: 193 VIQVAGRTHPVEVRHQPPAETGGEADADEQGYTERAAAAVLEIINHEPPGDILVFMPTER 252 Query: 302 EIRDTADALNKLNLRHTE--------ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAET 353 +IR+TA+ L I+PLY RLS EQ R+FQ GR+IV+ATNVAET Sbjct: 253 DIRETAELLEGALGAPAAAGRGGKNTIMPLYGRLSPKEQRRIFQPVKGRKIVIATNVAET 312 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 S+TVPGI+YV+D G AR++ Y+ R + +LP+ P+++++ +QR GRCGRV+ G+CIRLY Sbjct: 313 SITVPGIRYVVDTGLARVAAYNPRARTYKLPVVPVARSACDQRAGRCGRVAPGVCIRLYG 372 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 EDD+L+RP +T PEI+R+NLA VIL+MTAL LGD AAFPFV+ P R I+DG +LL ELG Sbjct: 373 EDDYLNRPLYTPPEIVRSNLAEVILRMTALKLGDPAAFPFVDPPSARAIKDGYQLLAELG 432 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 A+ +L+ GR +S+LP+DP ++RM+LEA+ +RE +I +ALSIQDPR R Sbjct: 433 AL-EGPSGGRLQLSRRGRLMSRLPLDPCISRMILEARDQNALREVCVIAAALSIQDPRIR 491 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVR 592 P DK++ +D+ HRRF +SDFL ++ LW+ + ++ S R+ C++ +L++ R+R Sbjct: 492 PADKEKEADQVHRRFSVPDSDFLFYLKLWDTMQNVLEQTGSKARLRKFCQSHFLSFQRIR 551 Query: 593 EWQDIYTQLRQVVK-ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 EWQDIY Q+ +++ E G +N E A +H ALL+G L +I K +K Y G Sbjct: 552 EWQDIYGQIGRILAGEKGFSLNHEAAAADAVHKALLSGNLRNIAQK-KEKNIYQGGGGRE 610 Query: 652 FSIFPGSGLFKK--------------------------PPKWVMVAELVETSRLWGRIAA 685 IFPGS L+ + P W+M AELVETSRL+ R A Sbjct: 611 VVIFPGSSLYYRGGEGQAKGAKRQGRGAKEGGRPETGPTPGWLMAAELVETSRLYARTVA 670 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 IDP+W+EP+A+ L++ +YS+PHWE+ +G V+A EK T++GL +VA RKV +++IDPA Sbjct: 671 AIDPDWIEPLARPLMRYSYSDPHWEKRRGQVVAKEKGTLFGLVVVAGRKVPFARIDPAEA 730 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 R +FI+ ALVEG+ + + F N +L A++++LE +SRRRD+LV D+ +F+FY+QR+ Sbjct: 731 RRIFIQSALVEGELKGNYHFLGHNRQLLADLKDLEERSRRRDLLVADDRIFQFYEQRLPP 790 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 +V + KK +T L ++ L+ + +P G + L+LSY F Sbjct: 791 EVCDQASLNRLLKKRRGDT--FLQLQREDLLYREPKADLMEQFPTAMQVGQISLQLSYHF 848 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 EPGA+ DG++V IP+ L + FEW +PG+ E + L+K+LPK +RR VP P A Sbjct: 849 EPGAEDDGLSVLIPVQLAAHLRPERFEWLVPGMLEEKIFFLLKNLPKNLRRQLVPIPRTA 908 Query: 926 EAFLGRVKPL----ELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNK 981 ++ + L +L +E+ G+ ++ W +PDHL+ F +V+ ++K Sbjct: 909 AELAEKLHEKLQSVNISLYQALGQEIYHRYGLRIEAAAWPIKALPDHLRCRFCLVNQEDK 968 Query: 982 KLKEGRSLQDL--KDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK 1039 L GR+L L + + A ++ + ++P+ + ++ Sbjct: 969 ILASGRNLSALASGGPPAAPPPDKVVAALRQRWQRQNISGAELPEIPQRLPMTGPDGQLI 1028 Query: 1040 AW--PALV-DERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLG 1096 + P L D+R V + LF A GL RL + +K L + L + Sbjct: 1029 GYLFPGLQEDDRGRVNLHLFTAEKPAHLATCQGLLRLFCREFTARLKGLRKDLTFPRQHW 1088 Query: 1097 LYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE-LNDTVVDIAKQ 1155 + + EL + ++ G + F A EK+R + + + Sbjct: 1089 RLAHGVASLEELNRAIEQFVLREIFATGSGELIGAAEFQARVEKLRRDGFYQEARRLYEL 1148 Query: 1156 VEQILTAVFNINKRLKGRVDMTM---------------ALGLSDIKAQMGGLVYRGFVTG 1200 + +L + + + V A +++++ ++ L+ F+ Sbjct: 1149 ILLVLQERWETLQAINRLVPPAAGGQSRVGSAAAAGLPAELIAELQQELAELLPPDFLEH 1208 Query: 1201 NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED 1260 + L RYL+A++ R ++ DP +D A+ ++ +Q Q++ + + + Sbjct: 1209 HDAASLARLPRYLKALQIRTQRALSDPAKDAAKAARLAAFKQRLQKYPDASELSAGKRSV 1268 Query: 1261 VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 + E R M+ E ++S FAQ++ T +P+S +R+ + ++ G Sbjct: 1269 LAEYRLMLAEYKISLFAQEIKTIFPVSPQRLEEKWREVEG 1308 >UniRef50_D2UEZ1 Putative atp-dependent helicase protein n=1 Tax=Xanthomonas albilineans RepID=D2UEZ1_XANAL Length = 1375 Score = 1316 bits (3406), Expect = 0.0, Method: Composition-based stats. Identities = 539/1367 (39%), Positives = 788/1367 (57%), Gaps = 96/1367 (7%) Query: 16 LDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPD 75 +D + RDR R + A ++ F+ + +D + + R AA+P I Sbjct: 20 IDGALTRDRGRLLGLWSRWQAAPGNAALESAFE---QALDASRTRCAARAAAQPAIVLDP 76 Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LP++++ + I+ IR HQVV++AGETGSGKTTQLPK+C+ GRG G+IG TQPRR+AA Sbjct: 77 QLPIAREAERIVALIRAHQVVVIAGETGSGKTTQLPKLCLIAGRGAAGMIGCTQPRRIAA 136 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 R VA R+AEEL+T G +G++VRF+D V + T+VK MTDGILLAEI DR L YDTII Sbjct: 137 RAVAARVAEELRTPVGETVGFQVRFNDRVGEQTLVKFMTDGILLAEIASDRWLSSYDTII 196 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHERSLNIDFLLGYLK+LL +RP+LK+I+TSATID RF+ HF +AP+I V GRTYP Sbjct: 197 VDEAHERSLNIDFLLGYLKQLLRKRPELKVIVTSATIDTARFAAHFEDAPVIGVEGRTYP 256 Query: 256 VEVRYRPIVEEADDT--------ERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDT 306 VEVRYRP+ +E+ DT ER +AI AVDE+++ + GD+L+F+ GEREIRD Sbjct: 257 VEVRYRPLQDESGDTDASGDSAGERTVNEAILAAVDEITRLDPRGDVLLFLPGEREIRDA 316 Query: 307 ADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDP 366 AL + R TE+LPLYARLS S+Q+RVF RR+VLATNVAETSLTVP I+YV+DP Sbjct: 317 HQALERRKYRETEVLPLYARLSASDQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDP 376 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDP 426 G AR+ RYS R K+ RL IEPISQASANQRKGRCGR++EGIC RLY+E DF +RP FTDP Sbjct: 377 GYARVKRYSPRQKLDRLHIEPISQASANQRKGRCGRIAEGICYRLYAEADFQARPMFTDP 436 Query: 427 EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKL 486 EI R++LA VIL+M LGLG + FPF+E PD+R + DG + L ELGA+ ++ KL Sbjct: 437 EIRRSSLAGVILRMLQLGLGRMEDFPFLEPPDERAVADGWQQLVELGAVGEPDRHGVRKL 496 Query: 487 TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHR 546 T +GR++++LPVD +LARM++ AQ+H C+R ++I + L IQDPRERP + ++A+D H Sbjct: 497 TEIGRKMARLPVDVKLARMLVAAQQHACLRPMLVIAAFLGIQDPRERPPEAREAADNAHA 556 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD---YLNYLRVRE---------- 593 +F D S+F+ + LW+ + + L+ + R C +L RE Sbjct: 557 KFADARSEFVGILRLWDGYRQAHEELTQSKLRDWCARHFLGFLRMREWRELHRQLHLLCA 616 Query: 594 --------------------------------WQDIYTQLRQVVK------ELGIPVNSE 615 + QL + + + Sbjct: 617 ELGWSEEPASALLQPLLTAAAAPAPARDAETAARMTRGQLHRAARLAREGRGASQTLAPT 676 Query: 616 PAE-----------------------YREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 P++ Y+ +H ALL GL + +G + +K ++ R RF Sbjct: 677 PSDTRATAPIGDAETPRASERVRAAAYQSLHRALLAGLPTQVGHRT-EKGDFLAPRQRRF 735 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 +FPGS L +KPP WV+ A L++T ++WG A I+P+WV HL+ R + +PHW RA Sbjct: 736 LLFPGSTLARKPPPWVLPATLLDTQKIWGLTNAAIEPDWVIAEVPHLLARKHFDPHWSRA 795 Query: 713 QGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKL 772 QG V+A+E+++++GL + + V+Y +IDP+ +LF+R ALV G+ TR +F +N K+ Sbjct: 796 QGQVLASEQISLFGLVLAPKKPVHYGRIDPSAAHDLFVRQALVPGEINTRASFVVDNQKV 855 Query: 773 RAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEK 832 A+ E E K RR I+ D++ +Y RI ++ S D+WW +S E L++ Sbjct: 856 LAQAHEEEAKLRRAGIVADEDWQARWYLDRIPAEIHSTAGLDAWWNALSPEQRRALHWSL 915 Query: 833 SMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFE 892 L+ YP ++ G+ +L L Y+FEPGA DGVT+ +P+ LLN ++ + Sbjct: 916 VDLLPGEGSA--ADRYPKYFALGDARLALHYRFEPGAADDGVTLEVPVHLLNALDPARLS 973 Query: 893 WQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV-KPLELPLLDSLERELRRMT 951 W PG + ALI+SLPK +RRN+VPAP++A AF +P L L R L+R T Sbjct: 974 WLAPGFVADKAAALIRSLPKALRRNYVPAPDFARAFYEAFAQPSADDLRGELARFLQRAT 1033 Query: 952 GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDG 1011 GV + D+ + HL++ R+ D+ K L E R L++L+ + +A A Sbjct: 1034 GVPLSPLDFDESALEPHLRMHLRLRDETGKVLAESRDLEELRARFGDRAGRAFAARAGRE 1093 Query: 1012 IEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLR 1071 + +GL + +P + G V A+PALVDE DSVA+++F + + + G+R Sbjct: 1094 MAATGLREFPLTPIPLHVPGEAG---VPAYPALVDEGDSVALRIFADRAQAETEHPRGVR 1150 Query: 1072 RLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTE 1131 RLL + + +K ++LP K L + L D + ++ L++ + Sbjct: 1151 RLLEIALTDKLKQARKQLPVSPKTSLLYAAIESQERLRGDLVDATLNALLEQGLDTIRDA 1210 Query: 1132 EGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGG 1191 + FA + V +L ++ K E I++A + +L+ + + L D++ Q+ Sbjct: 1211 DSFAQRRDTVAKQLFGEAMERLKLAEAIMSAAAELKPQLESPLMGWASGNLDDMRTQLAA 1270 Query: 1192 LVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL 1251 L+ GF+ L RYL+A+ R E+ DP RD+A+ML+++ + Sbjct: 1271 LMPPGFLRETPAHALAQFPRYLRAMLLRAERAKRDPARDQARMLELKPFVDVLTEAAV-- 1328 Query: 1252 PPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 RR+D + +RW +EELRVS FAQ+LG IS K++ Q + + Sbjct: 1329 -AGRRDDPQWQALRWDLEELRVSVFAQELGAKSGISAKKLAQRVAAL 1374 >UniRef50_D0KXD2 ATP-dependent helicase HrpA n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXD2_HALNC Length = 1394 Score = 1315 bits (3404), Expect = 0.0, Method: Composition-based stats. Identities = 561/1380 (40%), Positives = 786/1380 (56%), Gaps = 86/1380 (6%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQA-IFQEMAKEIDQAAG 59 ++ + L+ L L L D+ SRRL G ++ + A E+ + +A Sbjct: 19 LSTEPADIIDFLRANLAELPLVDQPALSRRLAGAERALQQNRLDAGRLAELVTAFEASAA 78 Query: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + R +A I YP LPVS +++ I++ IR H VVIVAGETGSGKTTQLPK+ +ELG Sbjct: 79 LLTERRSAELNIDYPAELPVSGQREAIMDLIRAHPVVIVAGETGSGKTTQLPKMLLELGF 138 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 G+KG IGHTQPRR+AAR VA+R+AEEL G +GYKVRFSD ++ V +MTDGILL Sbjct: 139 GVKGQIGHTQPRRIAARNVASRLAEELGVTGAGVVGYKVRFSDQTRASSRVAVMTDGILL 198 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 AEI D L++YD +IIDEAHERSLNIDFLLG ++ LL RRPD +++ITSATID RF+R Sbjct: 199 AEIHSDPDLLRYDALIIDEAHERSLNIDFLLGIVRRLLDRRPDFRLVITSATIDTARFAR 258 Query: 240 HFNN---------APIIEVSGRTYPVEVRYRPIVEEADD------TERDQLQAIFDAVDE 284 HF AP+I V+GR++PVE RYR + +D ERD A+ AVDE Sbjct: 259 HFAGTDASGEPQPAPVITVAGRSFPVEYRYRSLTAPQNDNDTETEEERDLPAAVVAAVDE 318 Query: 285 LSQESH----GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHS 340 L E+ GDIL+F+ GEREIR+ A L + LRHTEILPL+ARLS +EQ R+F H+ Sbjct: 319 LHAEAQTTGGGDILVFLPGEREIRECAHRLGRHGLRHTEILPLFARLSAAEQQRIFAQHT 378 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 GRRIVL TNVAETSLTVPGI YVID G ARI+RYS R++VQ+L +E ISQASANQR GRC Sbjct: 379 GRRIVLTTNVAETSLTVPGILYVIDSGLARIARYSPRSRVQKLAVEAISQASANQRAGRC 438 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GR++ G+CIRL+ E D+ RP FTDPEILRTNLASV+L+M L LG+ FPF+E PD R Sbjct: 439 GRIAPGVCIRLFDEADYAGRPAFTDPEILRTNLASVVLRMIELRLGEPEHFPFIEPPDSR 498 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVL--EAQKHGCVREA 518 + RLL ELGA+ ++TPLGRQL++LPVDP L RMVL ++ + Sbjct: 499 QLAGARRLLFELGALDE-----RQRITPLGRQLARLPVDPTLGRMVLSNLSKADATSVDI 553 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 +I+ + LSIQDPRERP D QA+D+ + F +SDF + LW+ + + R Sbjct: 554 LIVVAFLSIQDPRERPADHAQAADQAQQAFRLADSDFAGILALWDQWHTVVRHENQRKRR 613 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP---------------AEYREIH 623 + +L+Y R+ EW D++ QLR+ E+G +P A +H Sbjct: 614 DWAKKHFLSYNRLLEWHDLFGQLREQADEIGRVKLPDPLPLPVMTDGDEAPLRARLDALH 673 Query: 624 IALLTGLLSHIGMKDADKQE---------------------YTGARNARFSIFPGSGLFK 662 A+L GLL+ IG++D + Y GA N RF IFPGS L K Sbjct: 674 QAMLPGLLAQIGLRDEATRTDKNTPKDSRDQRGKKQRTPTIYIGANNRRFQIFPGSQLAK 733 Query: 663 KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKV 722 PKW+M AE+VET+R++ R+ A I+P W+E +A HL R YSEP W++ G V A E V Sbjct: 734 TQPKWLMSAEIVETTRVYARMNATINPRWIEDMAAHLTTREYSEPRWDQRGGRVAAFETV 793 Query: 723 TVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHK 782 ++GLPIV R++++ +IDP R +FIR ALVEG++ + F+R N L E+ E+E + Sbjct: 794 KLFGLPIVTKRRIDFGRIDPLGARAIFIRAALVEGEFDSGLKFWRHNQALIDEIREIEAR 853 Query: 783 SRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEK 842 +RR D+L+DD+TLF+FY+ + +V A W K ++ + PD+L + L+ + Sbjct: 854 NRRPDLLIDDQTLFDFYETHLPAEVYDAHTLVRWLKTITPKQPDVLCMTRDDLLAREPVE 913 Query: 843 ISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRREL 902 + +P+ G L L+Y F PG+ DGVT+ +PL L Q++ IPGLRRE Sbjct: 914 LDPAGFPDRLSMGAFSLPLAYHFAPGSADDGVTLRLPLAALKQIDADRASHLIPGLRREK 973 Query: 903 VIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHW 962 + ALI+SLPK RR+FVPAP +A + RV L + +L RMTG + + + Sbjct: 974 IEALIRSLPKADRRHFVPAPEFAASVNERVSVDRGGLPAQVAEQLARMTGHKITADAFDE 1033 Query: 963 DQVPDHLKITFRVVDDK-----NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGL 1017 ++ HL++ F ++D K + + R L L+ + L +E+ L Sbjct: 1034 RRLEPHLRMRFALIDAKQTDPDKQIIDADRDLSALRARHAAAAERALVERTRHRLERDDL 1093 Query: 1018 HIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLN 1077 WSFG+LPES + ++ A+PAL+D+ D ++LFD P A +G+ RL+L+ Sbjct: 1094 IDWSFGELPESLTVEELGAELTAYPALIDQGDCAEVRLFDAPERAVLAHRSGVVRLMLIA 1153 Query: 1078 IPSPIKYLHEKLPNKAKL---GLYFN---------------PYGKVLELIDDCISCGVDK 1119 + I++L + L + L L ++ P + I+ + K Sbjct: 1154 LGEQIRHLSQYLKQERSLDPARLQYSQWSNTRPLPAFGLTLPQRRDAAFDQALIARSIAK 1213 Query: 1120 LIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMA 1179 L + E F A E+++ +L+DTV +A Q+ I + +LKGR+ ++ Sbjct: 1214 LAVDALPFIRDESTFRARVERLKPQLDDTVRRLAAQIRTIFAQHQALRAKLKGRLPLSQI 1273 Query: 1180 LGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEN 1239 +I Q L Y G + L + RYL A EKRLEK+ P RDR ++ Sbjct: 1274 EAAREIAEQFDLLFYPGMIWNTPQTLLDNLPRYLTAAEKRLEKIDRHPERDRMLRVQFMP 1333 Query: 1240 VQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 V I P + ++ +EE RV+ FAQ+L K I QA++Q+S Sbjct: 1334 VCARVTDKITATAPTPEAFAALNQLHEQLEEWRVATFAQELARKGAPGAKEIEQAIKQLS 1393 >UniRef50_A6WCM9 ATP-dependent helicase HrpA n=5 Tax=Bacteria RepID=A6WCM9_KINRD Length = 1388 Score = 1305 bits (3378), Expect = 0.0, Method: Composition-based stats. Identities = 655/1326 (49%), Positives = 886/1326 (66%), Gaps = 73/1326 (5%) Query: 41 DAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAG 100 +A + + ++ A +V R A+ P + YP+ LPVSQ+K I A+RDHQV++VAG Sbjct: 65 EAFEEELPALEQQTVAAEQRVTARAASVPALRYPEQLPVSQEKDRIAAALRDHQVIVVAG 124 Query: 101 ETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF 160 ETGSGKTTQLPKIC+E+GRG++G IGHTQPRR+AAR VA R+AEEL TE GG +GY VRF Sbjct: 125 ETGSGKTTQLPKICLEIGRGLRGRIGHTQPRRIAARAVAERVAEELGTELGGSVGYAVRF 184 Query: 161 SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR 220 +D V ++++VK+MTDGILLAEIQ+D L+QYDT+IIDEAHERSL IDFLLGYL LLPRR Sbjct: 185 TDTVGEDSLVKVMTDGILLAEIQRDPELLQYDTLIIDEAHERSLTIDFLLGYLARLLPRR 244 Query: 221 PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEAD------------ 268 P+LK++ITSATIDPERFSRHF API+EVSGRTYPVEVRYRP++ Sbjct: 245 PELKLVITSATIDPERFSRHFGGAPILEVSGRTYPVEVRYRPLLAAELAEELLGPADEEE 304 Query: 269 -----------DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL----NKL 313 +RDQ + I DAV EL+ E GD+L+F+ GEREIRDTADAL + Sbjct: 305 GDALDERDDLVGDDRDQTEGILDAVRELAAEGPGDVLVFLPGEREIRDTADALADLVKER 364 Query: 314 NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 R TEILPL+ARLS EQ+RVF++ + RRIVLATNVAETSLTVPGI+YV+D GTARISR Sbjct: 365 GFRGTEILPLFARLSAEEQHRVFRTAAHRRIVLATNVAETSLTVPGIRYVVDAGTARISR 424 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 YS+RTKVQRLPIE ISQASANQR GRCGRV++GICIRLYS+ DF SRPEFTDPEILRTNL Sbjct: 425 YSHRTKVQRLPIERISQASANQRAGRCGRVADGICIRLYSQSDFESRPEFTDPEILRTNL 484 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY--KLTPLGR 491 A+VILQMT+LGLGDIAAFPFVE P+ R I DG+ LL ELGA+ +LTP GR Sbjct: 485 AAVILQMTSLGLGDIAAFPFVEPPEPRAITDGLALLAELGALEDARPGDRGVPRLTPTGR 544 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 L++LP+DPRL RMVLEAQ++GC+ + +++ +ALS+QDPRERP++K++ + + H RF + Sbjct: 545 DLARLPIDPRLGRMVLEAQRNGCLHDVLVVVAALSVQDPRERPLEKREQAAQLHARFRHE 604 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 +SDFL ++NLW+YL Q+ LSS+AFRR + + L++LR+REWQD Y+QLR+V ++L Sbjct: 605 QSDFLTYLNLWSYLQHLQRDLSSSAFRRRVKAEMLHFLRIREWQDTYSQLRRVTRDLRFS 664 Query: 612 VNSEPA--------------EYREIHIALLTGLLSHIGMKDADKQ--------------- 642 V + +H +LL GLL +IG+KD + Sbjct: 665 VEVREPAELGEDELFPAPGYDADAVHRSLLAGLLGNIGLKDVREDTAKAGARTGGRRESR 724 Query: 643 -------EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 EYTGAR A+F++ PGS L ++ P WV+ ELVETSRLW R+ A IDP W+EP+ Sbjct: 725 PTGRQQVEYTGARGAKFAVSPGSSLGRRSPDWVVAGELVETSRLWARVVAAIDPRWIEPL 784 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 A H+++R+YSEP W R + AV+ATE+VT+YG+PIVA R V Y +DP L R+LFIRHALV Sbjct: 785 AAHVVRRSYSEPRWSRKRAAVIATERVTLYGVPIVAGRSVPYGGVDPELARDLFIRHALV 844 Query: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 815 EGD++TRH FF N +L AE EELEH++RRRDI+VDDE LF FYD R+ DV+S RHFD+ Sbjct: 845 EGDFETRHEFFHRNRELLAEAEELEHRARRRDIVVDDEVLFAFYDARVPADVVSGRHFDA 904 Query: 816 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 875 WWK R PDLL F+ +ML+ E + +S+ +P W QG+L+L L Y F+PG+ ADG+T Sbjct: 905 WWKDERRVRPDLLTFDPAMLVTED-DAVSEEQFPRVWRQGDLELALDYVFDPGSPADGLT 963 Query: 876 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL 935 V +P+ ++N+ ++ WQ+PG R +LV A+I++LPK +R+N PAP+ A FL RV+P Sbjct: 964 VDVPVEVVNRFDDRDLLWQVPGFRHDLVTAMIRALPKELRKNLAPAPDKAARFLERVRPH 1023 Query: 936 ELPLLDSLERELRRMT-GVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKD 994 + E E+ R+ G + ED W +VP HL+ TFRV+ L G+ L+ Sbjct: 1024 VDRFWPAFEAEMPRLGDGTEIYAEDVDWTKVPAHLRPTFRVLAGDGSVLATGKDFPRLRA 1083 Query: 995 ALKGKVQETLSAVADDGIEQSGLHIWSF--GQLPESYEQKRGNYKVKAWPALVDERDSVA 1052 +L+ V ETL+A ADD ++++G W+ ++P ++ V ++PALVDE +V Sbjct: 1084 SLETAVVETLAAAADD-VQRTGATSWADLPEEVPPTHTSVVRGSDVTSYPALVDEGTTVG 1142 Query: 1053 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKV-LELIDD 1111 ++ F + A G+ RLL+L +PSP + + + L N AKL L P+ + D Sbjct: 1143 LRTFPDAARAAVAHREGVLRLLVLALPSPARRVQDALTNDAKLLLARAPHADAGAVVADC 1202 Query: 1112 CISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLK 1171 + L +A GG V T F L E+V D ++ ++L + K + Sbjct: 1203 AQAAAAQLLDEARGGEVRTAGEFRRLLERVSPRYADLTATAVERTLRVLRTAAAVEKNIS 1262 Query: 1172 GRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDR 1231 + + L+D++ Q GLV+ GFV G +RL D LRYLQ I++RL + +P RDR Sbjct: 1263 RTSSLALVPSLADVREQFTGLVHAGFVAETGVERLPDLLRYLQGIDRRLATMPENPQRDR 1322 Query: 1232 AQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 +M + V++ ++ + + ++ IRW +EELR+ FA + T +P+SD+R+ Sbjct: 1323 VRMAEFARVREEHRKRLAR--AGSPVPPELARIRWTLEELRLQKFAPGIPTAHPVSDERV 1380 Query: 1292 LQAMEQ 1297 L+A+ + Sbjct: 1381 LKALAE 1386 >UniRef50_Q7USX6 ATP-dependent helicase hrpA n=1 Tax=Rhodopirellula baltica RepID=Q7USX6_RHOBA Length = 1384 Score = 1295 bits (3352), Expect = 0.0, Method: Composition-based stats. Identities = 509/1330 (38%), Positives = 730/1330 (54%), Gaps = 112/1330 (8%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 +I YP +LP++ + I++ + ++QV++V GETGSGK+TQLPK+ ++ G G G+IGHTQ Sbjct: 64 KIEYPSDLPITAHRDAIVDLLAENQVLVVCGETGSGKSTQLPKMLLDAGLGEHGMIGHTQ 123 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAAR++A R+AEE +T+ GG IGY+VRF D SD T +KLMTDGILLAE + DR L Sbjct: 124 PRRLAARSIATRLAEETETKLGGAIGYQVRFGDQTSDRTKIKLMTDGILLAETRIDRELR 183 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN------- 242 Y IIIDEAHERSLNIDFL+GYL++L+ RRP+LK+IITSATID ERF+ HF Sbjct: 184 NYSAIIIDEAHERSLNIDFLMGYLRQLIDRRPELKVIITSATIDAERFAEHFGTYSEEAA 243 Query: 243 ----------NAPIIEVSGRTYPVEVRYRPIVEEADDTER------DQLQAIFDAVDELS 286 API++V GR YPVE+RY P + A + D + + +D LS Sbjct: 244 SDPENESNVIPAPILQVEGRGYPVELRYFPWEDIAGEDAEIDGRHYDLSRHVIGGLDSLS 303 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLRH-----TEILPLYARLSNSEQNRVFQSHS- 340 ++ GD L+F+ ER+IR+ + + R E+LPLYARL S+Q +F Sbjct: 304 RDGSGDTLVFLPTERDIREVSHHVAGHYKRMGLTNRVELLPLYARLPQSQQQAIFHPSGN 363 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 RRI+ ATNVAE+SLTVPGI+YVID GTARISRYS RTKVQRLP+E IS+ASANQR GRC Sbjct: 364 KRRIIFATNVAESSLTVPGIRYVIDSGTARISRYSARTKVQRLPVEAISRASANQRSGRC 423 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GRV GIC+RLYS +DF +R FT PEI RTNLASV+LQ L LG + FP ++ P Sbjct: 424 GRVGPGICVRLYSAEDFETRDAFTTPEIRRTNLASVVLQSKTLRLGRLEEFPLIDPPRAE 483 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 I++G+R L ELGAI D++ LT +G QL +LPVDPR+ R+++ A++ G + E + Sbjct: 484 AIREGMRTLHELGAIDEDKE-----LTEIGWQLGRLPVDPRVGRILIAAKEMGVLPEVLP 538 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 I +A+ DPR+RP +K+ A+DE H F D ESDFL+ + LW + + S R+ Sbjct: 539 IAAAMENPDPRDRPPEKRAAADEAHAAFKDPESDFLSLLRLWRFYDTMRSDHSRGKLTRI 598 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE------------------------- 615 R ++L+ R+REW D+Y QL+++ +G Sbjct: 599 LRKNFLSPTRMREWSDVYRQLKEMSASIGENKRRSKNKSLTSRGSVGKIRYAELDPAKAD 658 Query: 616 -------PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWV 668 +Y IH AL+TGLLS I M DK EYTGA + ++PGSG+F+ PKW+ Sbjct: 659 QEQPVVDSDKYALIHQALMTGLLSGIAM-AGDKNEYTGAGGLKLFLWPGSGIFEAKPKWI 717 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLP 728 + AELVET++ + R ARI P W+E VA HL+K +YS+PHW R G ++ +++GLP Sbjct: 718 VAAELVETAKQYARTCARIQPGWIEAVAPHLLKASYSDPHWSRKSGGAFCYQRQSLFGLP 777 Query: 729 IVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 +V R+V + IDPA R+L IRH LVE + T F R N +L +E+L K+RRRD+ Sbjct: 778 VVVRRRVPLAPIDPATSRDLLIRHGLVENELPTTAKFVRHNRRLIESIEKLAAKTRRRDL 837 Query: 789 LVDDETLFEFYDQRISHDVISARHFDS---------WWKKVSRE--------TPDLLN-- 829 +VDD +L FY R+ DV + W K++ + P + Sbjct: 838 VVDDYSLLSFYASRLPEDVCDRPRLEKFDRQNPAPAWASKLNDDVALAAWLADPPATDSD 897 Query: 830 ---------FEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPL 880 ++ + I+ YP+ + G+ +L L Y F PGA+ DGV + I Sbjct: 898 DEHSETTPYLRPQDILSVDSVAIAADAYPDEFAAGSSRLPLQYHFRPGAEDDGVHLTIHE 957 Query: 881 PLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLEL--P 938 L QV + W +PGL VIA+IKSLPK +RRN VPA + A + + P Sbjct: 958 AALPQVSDDALGWLVPGLLEPKVIAMIKSLPKRLRRNLVPAADVAARVVAEISDKRGQVP 1017 Query: 939 LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKG 998 + +L L R V V D+ +++ HL+ VVDD +++ R + +K L Sbjct: 1018 FMPTLCEALTRHAEVRVVESDFQDEKLEPHLQFLVNVVDDTGNVIEKTRGVDAVKAKLGS 1077 Query: 999 KV-----QETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAI 1053 ++ ++ + + + + LP +KRG +V +P LVD+ DSV+ Sbjct: 1078 RIIDDSEVAAAASGPEADWSREKMTSFDLDVLPREVVRKRGGVQVAQYPGLVDQGDSVST 1137 Query: 1054 KLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGK---VLELID 1110 KLF + + A G+ RL + ++ LP A+ + P + + Sbjct: 1138 KLFSDEATAENATRLGMMRLFAIACRKDLRAQVRHLPALAEAKIKLAPIVSSAVIETALA 1197 Query: 1111 DCIS--CGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINK 1168 D I+ V+ V F + + + DIA + ++ A ++ Sbjct: 1198 DLIARVALVESQPGRKMPVVRKRAEFDERIQMAPQRIGEATQDIAGWLGKLTDAYHSMRC 1257 Query: 1169 RLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPH 1228 + + M +D+ Q+ LV F+ ++ L RYL AI RL+K + Sbjct: 1258 QWEESSSPKMNDVRADVMQQIEWLVADQFIQWTPWQHLQHLPRYLSAIAYRLDKASSAAS 1317 Query: 1229 RDRAQMLKVENVQQAWQQWINKLPPARREDED--VKEIRWMIEELRVSYFAQQLGTPYPI 1286 RD ++ + Q W ++ LP RR+ + E RW+IEELRVS FAQ LGT + Sbjct: 1318 RDAEGRQLIDRLWQRW---LSGLPEDRRDPKSQCTSEFRWLIEELRVSQFAQPLGTAVKV 1374 Query: 1287 SDKRILQAME 1296 S+KR + + Sbjct: 1375 SEKRCEKLLS 1384 >UniRef50_Q1NTJ0 ATP-dependent helicase HrpA n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NTJ0_9DELT Length = 1307 Score = 1261 bits (3264), Expect = 0.0, Method: Composition-based stats. Identities = 489/1291 (37%), Positives = 735/1291 (56%), Gaps = 66/1291 (5%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +T P LP++ +++I+ I VVI+AGE GSGKTTQ+PK C+ GRG + IG TQP Sbjct: 14 LTVPAELPIAAWQEEIVGQISASPVVIIAGEPGSGKTTQIPKFCLLAGRGRRQKIGCTQP 73 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RRLAA +A R+ EL + +G++VRFSD T VK MTDGILLAE+Q+D L Sbjct: 74 RRLAAVAMAERLGVELGSSGSSLVGHRVRFSDRTDRATRVKFMTDGILLAEVQRDGELRD 133 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 YDTII+DEAHER+LNIDFLLG LK+LL RR DLK+IITSATID +FSRHF++AP+IEVS Sbjct: 134 YDTIIVDEAHERTLNIDFLLGILKDLLARRDDLKVIITSATIDTAKFSRHFSDAPVIEVS 193 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL 310 GR +PVE+RY+P EE + +A + L+ + GDIL+FM ER+IR+TA+ + Sbjct: 194 GRAHPVEIRYQPWDEENGEDPGHVERAAAAVEEILTTSTAGDILVFMPTERDIRETAELI 253 Query: 311 N-----KLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 N + +LPLY RLS +EQ R+F+ +GR++V+ATNVAETS+TVPGI+YV+D Sbjct: 254 NSQPAGRRRGGKAVVLPLYGRLSPAEQARIFRPVAGRKVVVATNVAETSITVPGIRYVVD 313 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARI+ Y+ R + +LP+ P++++S +QR GRCGRV GICIRLY E+D+L+RP +T Sbjct: 314 SGLARIAAYNPRARTHKLPVVPVARSSCDQRAGRCGRVGPGICIRLYREEDYLNRPLYTP 373 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASA-- 483 PEI+R+NLA VIL+M AL LG AFPFV+ P R I DG +LL ELGA+ + + Sbjct: 374 PEIVRSNLAEVILRMVALKLGRPDAFPFVDPPSSRAISDGYQLLTELGAVAPEPRRGRQK 433 Query: 484 ----YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 +LTP GR +++LP+DP ++RM++EA+++ + E +I +ALSIQDPR RP DK++ Sbjct: 434 GRPPLQLTPRGRLMARLPLDPCISRMIIEARENNALSEVCVIAAALSIQDPRLRPADKEK 493 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGE-QQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 +DE H RF SDFL +V LW E ++ S R+ C +L++ R+REWQDI+ Sbjct: 494 EADEVHGRFAVPGSDFLFYVRLWETSREVLRQTGSLGRLRKFCAGHFLSFQRLREWQDIH 553 Query: 599 TQLRQVVK-ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 Q+ +++K E G N PAE +H ALL+G L +I MK +KQ Y G + IFPG Sbjct: 554 EQILRILKAERGFSFNRTPAEPAAVHRALLSGNLRNIAMK-KEKQHYQGGGGRQLMIFPG 612 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVM 717 S LF KPP W+M AELVET RL+ R A I+PEWVEP+A L++ +Y PHWE+ +G + Sbjct: 613 SSLFGKPPPWIMAAELVETGRLYARTVAAIEPEWVEPLAGDLMRYSYGNPHWEKRRGQAV 672 Query: 718 ATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVE 777 A E+ T++GLP+V RKV +++D A R LFI+ AL+EG+ + + F R N +L ++ Sbjct: 673 ALERGTIFGLPVVTGRKVPLARVDAAEARRLFIQQALIEGEMRGDYDFLRANRELVQQLA 732 Query: 778 ELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK 837 ELE +SRRRD+LVD+E +F FYD+R+ +V + KK + L + L+ Sbjct: 733 ELEERSRRRDLLVDEEEIFNFYDRRLPAEVCDQAGLNRLLKKQRGDD--FLRLRREDLLS 790 Query: 838 EGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPG 897 + +P G L+L LSY+FEPGA DG+TV +P+ L + FEW +PG Sbjct: 791 RPPDDDLPEKFPARLPIGELELALSYRFEPGAADDGLTVQVPIRLAGHLRPEPFEWLVPG 850 Query: 898 LRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV-------KPLELPLLDSLERELRRM 950 + E + L+K+LPK +RR VP P A + L ++ RE+ Sbjct: 851 MLEEKIFVLLKNLPKNLRRPLVPIPQTAAELTRALLRRGATTSGPVESLYQAMGREIYDS 910 Query: 951 TGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVA-- 1008 G+ + W +P+HL+ F ++ D ++L GR L L+ L +A+ Sbjct: 911 YGLRIAGSAWPLAALPEHLRCRFSLLADDGRELAAGRELAALQSNLPTAGAPPAAAIDAM 970 Query: 1009 DDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAW--PALVDERDSVAIKLFDNPLEQKQAM 1066 E++ + + +LP + + A+ PAL E + + ++L+ E +A Sbjct: 971 RQRYERALANSAALPELPSRLPLSDEHGTLLAYLFPALSIEDEEIWLRLYQRREEAHRAT 1030 Query: 1067 WNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG 1126 L L +K L + + L + G+ EL + ++ + Sbjct: 1031 GQALLLLYRREFSRQLKMLRQDCRPDRQQWLLYEGLGEWAELERRLEEFILREIFALHEP 1090 Query: 1127 PVWTEEGFAALHEKVR--------AELNDTVVDIAKQVEQILTAVFNI-----------N 1167 V + FAA +VR ++L + ++ +Q ++L + + + Sbjct: 1091 RVPSAAAFAASVARVRQAGLYTQGSQLFAQLQEVFRQRRRVLDTLQRLGGGGGPASKKGS 1150 Query: 1168 KRLKGRVDMTM-------------------ALGLSDIKAQMGGLVYRGFVTGNGFKRLGD 1208 +++KG A +++ + ++ LV F + L Sbjct: 1151 RQVKGLAAGLAAVTGGAVGAGDKAGAAALPAELVANFRQRLAELVEPDFPAHCRAEELSR 1210 Query: 1209 TLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMI 1268 RYL+ + R+E+ P R+ A+ ++ ++ + + + E + E R M+ Sbjct: 1211 LARYLKGLAVRVERAYAVPARESAKAAQLAPFKRRLADYPQA-AASPAQRELLAEYRRML 1269 Query: 1269 EELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 + +S FAQ++GT +PIS +R+ + +I Sbjct: 1270 ADYEISLFAQEIGTEFPISPQRLEEKWREIE 1300 >UniRef50_Q1H207 ATP-dependent helicase HrpA n=3 Tax=Methylophilaceae RepID=Q1H207_METFK Length = 1376 Score = 1241 bits (3213), Expect = 0.0, Method: Composition-based stats. Identities = 458/1023 (44%), Positives = 647/1023 (63%), Gaps = 10/1023 (0%) Query: 278 IFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQ 337 I D+V++LS+ GDIL+F+ GEREIR+TAD LNK LRH EILPL+ARLS +Q +VF+ Sbjct: 359 ILDSVEQLSRLGGGDILVFLPGEREIRETADYLNKH-LRHVEILPLFARLSIEDQQKVFR 417 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 S GRR+VLATNVAETSLTVPGIKYVID G AR++RYS R KV++L +E ISQA+A QR Sbjct: 418 SSGGRRVVLATNVAETSLTVPGIKYVIDTGLARVNRYSARAKVEQLQVEKISQAAARQRA 477 Query: 398 GRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 GRCGRVS GICIRLY E DF RPEFTDPEILR++LA+VIL+M AL LG++ FPF+EAP Sbjct: 478 GRCGRVSNGICIRLYDEADFNHRPEFTDPEILRSSLAAVILRMAALKLGNVQDFPFIEAP 537 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 R I DG +LL+ELGA+ ++ +T GRQL++LP+DPR++RM+LE +K GCVRE Sbjct: 538 SSRYIADGYQLLQELGAVDAEQN-----ITDTGRQLARLPLDPRVSRMILEGKKQGCVRE 592 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQK-ALSSNA 576 +II SAL+IQDPRERPMDK++A+D+ H +F+ + SDFL F+ LW + + K S+ Sbjct: 593 ILIIASALAIQDPRERPMDKREAADQAHAKFNVEHSDFLGFIKLWEWYEDALKTKKSNKD 652 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 C +++L++LR++EW+++Y QLR++ +EL + +N +PA Y ++H ALL GLL +IG Sbjct: 653 LLNKCHSNFLSFLRLKEWRELYQQLREIAEELELKLNEQPASYEQVHRALLAGLLGNIGF 712 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 KD + Y GAR RF I PGS L K PKWVM AEL+ET++L+ R ARI+P+W+EP+A Sbjct: 713 KDGEADNYLGARGIRFHIAPGSTLKKARPKWVMAAELMETTKLYARCVARIEPDWIEPLA 772 Query: 697 QHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVE 756 + L + YS+P W+R V+A E+V++YGL +V R+V+Y I+P RE+FIR AL Sbjct: 773 RGLTQSHYSDPRWDRKAAQVVAWERVSLYGLTVVPRRRVHYGPINPQESREIFIREALAN 832 Query: 757 GDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSW 816 ++ TR FF N KL AE+EELEHK+RR+D+LVD+ TLF FYD I +++ F+ W Sbjct: 833 MEFDTRAPFFAANRKLIAEIEELEHKARRQDVLVDEHTLFAFYDAIIPAGIVNGAGFEKW 892 Query: 817 WKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTV 876 ++ RETP LL + L++ GA ++++ +P +KL L Y+FEPG DGVT Sbjct: 893 RQEAERETPRLLYLTRDHLMRHGAAGVTEVQFPESLELDGVKLPLKYRFEPGHPLDGVTA 952 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLE 936 +PL LLNQ+ EW +PG+ RE V ALIK+LPK +RR VP P++ FL + Sbjct: 953 TVPLALLNQLNPVEAEWLVPGMIREKVTALIKALPKTLRRVCVPVPDFVTGFLETATRKD 1012 Query: 937 LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDAL 996 LL +L +++ TG+ + +W D + HL + FRVVD+KN++L GR LK L Sbjct: 1013 GALLPALASYIQQRTGLKLSASEWQADALDAHLYMNFRVVDEKNRELGSGRDWHALKAQL 1072 Query: 997 KGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLF 1056 Q T + + GIE++GL W FG LP + R ++ +PAL D DSVAIKLF Sbjct: 1073 GQAAQLTFRSNSP-GIEKAGLKQWDFGDLPPTLSFSRDGRQLTGYPALEDNGDSVAIKLF 1131 Query: 1057 DNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCG 1116 D L +Q+ G+RRL+ + +K L + LP + L EL +D + Sbjct: 1132 DTELAARQSHRAGVRRLMRFELKEQMKQLEKGLPGFNQYALQLRSIMSPEELREDMLVAI 1191 Query: 1117 VDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDM 1176 D+ + F AL + R L V + I T + ++L Sbjct: 1192 SDRAFIGEDELPRNSQDFMALKARARTRLPAVVEGAGRLATAIATEYTQLTQKLNA-APA 1250 Query: 1177 TMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLK 1236 +++ +++ Q+ L+ + F + + L RY++A+ RLEK RD Sbjct: 1251 SLSRVKKELEGQLARLLPKRFFSATPWDTLQHLPRYIKAMRLRLEKYPGAIERDTRSGQA 1310 Query: 1237 VENVQQAWQQWINKLPPA-RREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 V+ + + W+ + L A + V + RW+IEELRVS FAQ+L TP+P+S KR+ +A Sbjct: 1311 VQQIWERWESHVQGLRKANQEVPPAVLDYRWLIEELRVSLFAQELKTPFPVSVKRLDKAW 1370 Query: 1296 EQI 1298 E + Sbjct: 1371 EDM 1373 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 162/260 (62%), Positives = 198/260 (76%), Gaps = 1/260 (0%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKK-VKNPDAQQAIFQEMAKEIDQAAGKVLL 63 ++ LQ +L +L DR RRL V ++ + E+A ++ + + L Sbjct: 9 ERQVLKHLQAQLPDCLLLDRFHLKRRLQQVGAMLEQGKPVDKLMTELATKVQTSLQRRQL 68 Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 R+ P+ YP LPVS +K +I +AI HQVVIV+GETGSGKTTQLPKIC+ELGRG+ G Sbjct: 69 RQEQLPKPEYPAELPVSARKDEIAQAIAKHQVVIVSGETGSGKTTQLPKICLELGRGVAG 128 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRR+AAR+VA+RIA+ELK+ G +GYKVRF+D +S+ T +KLMTDGILLAE Q Sbjct: 129 LIGHTQPRRIAARSVASRIAQELKSPLGEAVGYKVRFNDRLSETTYIKLMTDGILLAETQ 188 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 DR L YDTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+I+TSATID ERFSRHFN Sbjct: 189 GDRFLNAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIVTSATIDAERFSRHFNG 248 Query: 244 APIIEVSGRTYPVEVRYRPI 263 AP+IEVSGRTYPVE+RYRP+ Sbjct: 249 APVIEVSGRTYPVEIRYRPL 268 >UniRef50_Q6AL39 Related to ATP-dependent helicase HrpA n=1 Tax=Desulfotalea psychrophila RepID=Q6AL39_DESPS Length = 1257 Score = 1233 bits (3192), Expect = 0.0, Method: Composition-based stats. Identities = 454/1263 (35%), Positives = 721/1263 (57%), Gaps = 72/1263 (5%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K +I+ AI+++QV+++AG+TGSGKTT+LP+ C+E+ + L+G TQPRRLAA Sbjct: 20 LPIDKHKDEIITAIKENQVIVIAGDTGSGKTTRLPQYCLEVAQ-EGKLVGCTQPRRLAAV 78 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+ EE+ +GYK+RF D+ + T +K MTDG+LLAE + DR L +Y +I+ Sbjct: 79 SVAARVGEEVGRS--EEVGYKIRFHDYTTAKTKIKFMTDGVLLAETKSDRDLRKYSILIV 136 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHER+LNIDFLLGYLK LLPRRPDLK+IITSATID F++HFNNAP+I + GRT+P+ Sbjct: 137 DEAHERNLNIDFLLGYLKRLLPRRPDLKLIITSATIDTASFAKHFNNAPLISIEGRTFPI 196 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALNKLNL 315 ++RY PI D + D L+ V +L +E D LIF+ E++IR+ + L K + Sbjct: 197 DLRYAPIA----DEDEDYLEHCTGVVSQLFLRERPADTLIFLPTEKDIRNCCEMLAKH-I 251 Query: 316 RHTEILPLYARLSNSEQNRVFQSHSG---RRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 + EILPL+ RL S+Q R+FQ +IV+ATNVAETS+TVPGI+YVID G AR++ Sbjct: 252 PNVEILPLFGRLQGSDQRRIFQPCPQGKIAKIVVATNVAETSITVPGIRYVIDSGLARMT 311 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 YS R+K LPI+ IS+AS +QRKGRCGRVS G CIRL++E+D+L R EFT PEI R+N Sbjct: 312 YYSVRSKTTSLPIQKISRASCDQRKGRCGRVSSGTCIRLFAEEDYLGRDEFTLPEIKRSN 371 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LA V+LQM++L LGD FPFV+ P I+DG LL+ELGAI Y+LT G+ Sbjct: 372 LAEVLLQMSSLKLGDPNKFPFVDPPATSTIRDGYALLQELGAI------KGYELTLRGKI 425 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 ++ LP+DP ++R+++EA + C+RE MII +ALS+QDPR RP +K++ +D+ H+RF K Sbjct: 426 MADLPIDPCISRILIEASSNSCLRETMIIAAALSVQDPRIRPAEKEKEADQVHQRFAHKH 485 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG-IP 611 SDF+A +N+WN E+++ S + ++ C++++L++ R+REW D++ QL ++VK Sbjct: 486 SDFMALLNIWNSFHEEEEKKSWSRLKKFCKSNFLSFQRMREWLDLHEQLCRIVKRYKEFS 545 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVA 671 N Y +IH ++L G L +I +K +K+ Y GA N +FPGS LF+ +W+M A Sbjct: 546 FNENDGSYEQIHRSILAGFLRNIALK-KEKKIYMGAGNRELMVFPGSHLFQSAGQWIMAA 604 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVA 731 ++T+RL+ A I+ +W+EP+A+ L + +++ P WE+ G V+A EKVT++GL ++A Sbjct: 605 GFLDTNRLYALTVATIEVDWIEPLAKSLCRYSWANPRWEKKTGQVIADEKVTLFGLVLLA 664 Query: 732 ARKVNYSQID---PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDI 788 +R+VN+ + D A R +FI AL+ GD ++ F + NL L ++ +E E + R+RDI Sbjct: 665 SRRVNFGKRDKKNRAEARRIFIESALLSGDLWGKYPFLKNNLTLVSQWQETEERLRKRDI 724 Query: 789 LVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDY 848 + D L +FY R+ DV + + K+ L + +++ E D+ Sbjct: 725 VYSDTALHQFYQDRLGEDVYDRTSLEKFLKQTE--DKKALFMTEQDILRRTPETSEYADF 782 Query: 849 PNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIK 908 P G+L L+LSY F+P + DG+TVHIP+ L + + F+W +PG +E + L+K Sbjct: 783 PTTIQIGSLSLKLSYTFDPRGNRDGLTVHIPVDLADTISPGRFDWLVPGFLKEKITFLLK 842 Query: 909 SLPKPVRRNFVPAPNYAEAFLGRV----KPLELPLLDSLERELRRMTGVTVDREDWHWDQ 964 LPK +R+ VP + + + + + +L LE + ++ + R DW + Sbjct: 843 GLPKSLRKKLVPINSSVDRIMDDISTKAQSPSGNMLSCLESSILKLYRFNLQRSDW-PQE 901 Query: 965 VPDHLKITFRVVDDKNKKLKEGRSLQDL-----------KDALKGKVQETLSAVADDGIE 1013 +P HL F + D K++ G +L+ + ++ K + G E Sbjct: 902 LPHHLTPYFVLEADSGKEVCSGNNLKQMLTGTPNKGAISQEQFSLKKDAQIIVDKWKGWE 961 Query: 1014 QSGLHIWSFGQLPESYEQ--KRGNYKVKAWPAL--VDERDSVAIKLFDNPLEQKQAMWNG 1069 W+F QLP S K+G+ + L +++R V + N E Q G Sbjct: 962 GD---SWAFDQLPASIPLYNKQGSISGFLFTVLDPIEQRSKVQVNFTRNKQEALQRNQKG 1018 Query: 1070 LRRLLLLNIPSPIKYLHE---KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGG 1126 L L L +K L + + Y E D + + + D + Sbjct: 1019 LSYLYQLQFKGQLKPLRKSCSSALSAPSSLWLVKNYSDRKEASDHLLQFILQGIFDLSEA 1078 Query: 1127 PVWTEEGFAALHEKV-------RAEL----NDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 + +E FA + +V R L + + ++ ++L VF + ++ + Sbjct: 1079 TLPGKESFAKVIGEVQKMGLLQRGNLICQDIAEIFRLRRETAELLEKVF-LTRKNANKEK 1137 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 T +L + +I + + F+ L R ++++ RLE+ + +P +D + Sbjct: 1138 ETFSLLIEEI-------LPKTFLQEKEID-LNSCRRQFRSLQVRLERFSANPVKDGQKNA 1189 Query: 1236 KVENVQQAWQQWINKLPPARREDEDVKE-IRWMIEELRVSYFAQQLGTPYPISDKRILQA 1294 + + + E + + + M++E R+S F+ ++ T P+SDK++LQ Sbjct: 1190 LLAPHLKNIEVAEKTREKLSDEACQLLDQYKKMVQEFRISVFSPEIKTQMPVSDKKLLQH 1249 Query: 1295 MEQ 1297 ++ Sbjct: 1250 WQK 1252 >UniRef50_A8L7U0 ATP-dependent helicase HrpA n=1 Tax=Frankia sp. EAN1pec RepID=A8L7U0_FRASN Length = 1441 Score = 1221 bits (3161), Expect = 0.0, Method: Composition-based stats. Identities = 594/1081 (54%), Positives = 761/1081 (70%), Gaps = 53/1081 (4%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLS 328 DTERDQ+ AI DAVDEL E GDIL+F+SGEREIRDTADAL + +L TEI+PLYARLS Sbjct: 360 DTERDQVSAICDAVDELCAEGPGDILVFLSGEREIRDTADALARRDLPMTEIVPLYARLS 419 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 ++EQ+RVF H+GRRIVLATNVAETSLTVPGI+YVIDPG ARISRYS+RTKVQRLPIEP+ Sbjct: 420 SAEQHRVFTPHTGRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSHRTKVQRLPIEPV 479 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 SQASANQR GRCGR S+GICIRLYSE+DF RP FTDPEILRTNLASVILQM ALGLG++ Sbjct: 480 SQASANQRAGRCGRTSDGICIRLYSEEDFAGRPAFTDPEILRTNLASVILQMEALGLGEM 539 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE 508 A FPF++ P+ R + DG+RLL ELGA D + +LTP+GR L+QLPVDPRLARMVL Sbjct: 540 ADFPFLDPPESRQVTDGMRLLTELGAFIEDAEPGK-RLTPIGRSLAQLPVDPRLARMVLA 598 Query: 509 AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 A + GC+ E ++I SAL+IQDPRERP++ + A+DE+H RF D SDFL+ +NLW +L Sbjct: 599 AGELGCLSEVLVIASALAIQDPRERPVEHRAAADERHARFTDPTSDFLSILNLWRHLRTA 658 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLT 628 ++ SSN FRR+CRT++LNYLR+REWQD++ QLR + + LG+ N PA+ R +H ALLT Sbjct: 659 REERSSNQFRRMCRTEFLNYLRIREWQDVHGQLRAIARNLGLEPNDSPADARSVHQALLT 718 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPK---------------------- 666 GLLSH+G + +K++Y GAR ARF+IFPGSGL ++ P Sbjct: 719 GLLSHLGRYEPEKKDYLGARGARFAIFPGSGLARRRPARPEAGDAGRGAPAEADAEAGGR 778 Query: 667 -------WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT 719 WV+ AELVETSRLW R AR++PEWVEP+A+HL++ TYSEPHW R Q A +A Sbjct: 779 RGPGIPTWVVAAELVETSRLWARTVARVEPEWVEPLAEHLLRHTYSEPHWSRKQAAALAY 838 Query: 720 EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEEL 779 EKVT+YG+P+V +R V Y +IDP + R+LFIRHALVEGDW TRHAFF N +L A VEEL Sbjct: 839 EKVTLYGIPLVTSRLVQYGRIDPVVSRDLFIRHALVEGDWNTRHAFFHANRELLAGVEEL 898 Query: 780 EHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEG 839 EH++RRRDILVDDETLFEFYDQRI DV+S RHFD+WWK R PDLL+F SML+ + Sbjct: 899 EHRARRRDILVDDETLFEFYDQRIPADVVSGRHFDTWWKATRRAEPDLLDFSASMLVNDR 958 Query: 840 AEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR 899 A I + DYP+ W ++L L+YQF PG ADGVTV +PLP+L + F WQ+PGLR Sbjct: 959 AGAIRQQDYPDTWVADGVELALTYQFTPGEAADGVTVRVPLPVLGTLRAEPFTWQVPGLR 1018 Query: 900 RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL------------------ELPLLD 941 ELV ALI++LPK VRR FVPAPNYA A L R+ P + PL D Sbjct: 1019 EELVTALIRALPKVVRRGFVPAPNYARAVLDRLTPGDRPAPGGPPSEGGGPPADDRPLAD 1078 Query: 942 SLERELRRMTGVTVDREDWHW----DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALK 997 ++ EL RM+G + W + +P HL++TFRVVDD L EG+ L +L+ L+ Sbjct: 1079 AVAGELHRMSGSALPSGVWAPPRLAELLPPHLRMTFRVVDDGGATLAEGKDLAELRARLR 1138 Query: 998 GKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFD 1057 + + A G+E+SGL W G LP E+ RG + V+A PALVDE SVA+++FD Sbjct: 1139 PRTKAV-VTAAAAGVERSGLRAWDVGTLPAVIERSRGGHVVRAHPALVDEGGSVAVRVFD 1197 Query: 1058 NPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGV 1117 + E +AMW G RRLLLLN+ SP++ + +LPN AKL L NP+ V +L+DDC++ V Sbjct: 1198 DREEADRAMWAGTRRLLLLNVASPVRGIIGRLPNAAKLALSNNPHRDVTDLLDDCVAAAV 1257 Query: 1118 DKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMT 1177 D L+ GG E GFAAL E VRAEL DT + + E++L A I+ ++ Sbjct: 1258 DTLLRRAGGAARDEAGFAALLETVRAELADTAWSVVRGTERVLAAAHEISLGVRALGSPA 1317 Query: 1178 MALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKV 1237 + + +D++AQ+ L++RGFVT G +RL D RYL A +RL++L D RDR L+V Sbjct: 1318 LLVTATDLRAQLDTLIHRGFVTETGAERLPDLERYLTAARRRLDRLPADAARDRQLTLRV 1377 Query: 1238 ENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 NV +A+ + I+++ PAR E V+ IRWMIEELRVS FAQ L TPYP+S++R+ +A+++ Sbjct: 1378 RNVVEAFNELIDEVGPARAGSEPVQAIRWMIEELRVSLFAQALRTPYPVSEERVYRAIDR 1437 Query: 1298 I 1298 + Sbjct: 1438 L 1438 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 156/279 (55%), Positives = 204/279 (73%), Gaps = 26/279 (9%) Query: 13 QQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEIT 72 + L LM RD R SR L +++++P A+ + +A +++ A +V R A+ P I Sbjct: 19 RACLPQLMARDAHRLSRHLDRARRMRDPAARDSSIARLAADVETARLRVETRRASVPVIG 78 Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 YP+ LPVSQ++ +IL A+RD+QVV++AGETGSGKTTQLPK+C+ELGRG++G+IGHTQPRR Sbjct: 79 YPEELPVSQRRDEILAALRDNQVVVIAGETGSGKTTQLPKLCLELGRGVRGMIGHTQPRR 138 Query: 133 LAARTVANRIAEELKTEPGGC--------------------------IGYKVRFSDHVSD 166 +AARTVA RIAEEL + +GY++RF+D V Sbjct: 139 IAARTVAERIAEELGSVIPETGRDRAQAGPNGNGSGGGNGSGGGGGLVGYQMRFTDRVGP 198 Query: 167 NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII 226 +T++KLMTDGILL E+ DRLL QYDT+IIDEAHERSLNIDF+LGYL LLPRRPDLK++ Sbjct: 199 STLIKLMTDGILLNELTADRLLRQYDTLIIDEAHERSLNIDFILGYLHGLLPRRPDLKVV 258 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 ITSATIDP RF+RHF++AP+IEVSGRTYPVE RYRP+++ Sbjct: 259 ITSATIDPHRFARHFHDAPVIEVSGRTYPVETRYRPLID 297 >UniRef50_D1N0X8 ATP-dependent helicase HrpA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0X8_9BACT Length = 1235 Score = 1214 bits (3141), Expect = 0.0, Method: Composition-based stats. Identities = 465/1261 (36%), Positives = 691/1261 (54%), Gaps = 47/1261 (3%) Query: 55 DQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC 114 + R + +P+ LP+S+ +I +A V+IV G+TGSGKTTQLPKI Sbjct: 3 PRPENPDYAASCDRFRVEFPEELPISRHVDEIKKAWESSPVIIVGGDTGSGKTTQLPKIA 62 Query: 115 MELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMT 174 + LG G +G IG TQPRR+AA ++ R+A+EL EPG +GY+VRF D + +T++K MT Sbjct: 63 LALGYGRRGRIGCTQPRRIAASAMSRRVAQELGCEPGTGVGYQVRFDDRTTKSTVLKFMT 122 Query: 175 DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDP 234 DGILLAE + DR L QY+ +IIDEAHERSLNIDFLLGYLK LLP RPDLK+ I+SAT+D Sbjct: 123 DGILLAETRNDRSLRQYEVLIIDEAHERSLNIDFLLGYLKNLLPHRPDLKVAISSATLDT 182 Query: 235 ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDIL 294 + FSR FN+AP+I + GRTYPVE + P E D+ Q+ + V L + GDIL Sbjct: 183 QEFSRFFNDAPVIAIEGRTYPVEDVFMPP--EYDEELSAQIARAAEFVTSL--DPQGDIL 238 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS 354 +F+ GEREIRD D L LR+TE+LPL+ RLS ++Q +VF RRIVLATNVAETS Sbjct: 239 VFLPGEREIRDATDVLTGRRLRNTEVLPLFGRLSAADQQKVFNPGGQRRIVLATNVAETS 298 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 +T+P I++VID G ARI R++ RT+++ L +E ISQASA QR+GRCGR+++G+C+ LYSE Sbjct: 299 VTIPRIRFVIDSGLARIKRFNPRTQIEELQVESISQASARQRRGRCGRIADGVCVHLYSE 358 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 +D +TDPEI RT LA VILQM ALGL I FPF+ P +++G+R LE+L A Sbjct: 359 EDLERSAPYTDPEIKRTGLAGVILQMAALGLPRITHFPFINPPPPAAVREGLRTLEDLRA 418 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 + A +LT G +L++LP+DP L +M+ A+K + E ++I + LSIQDP+ERP Sbjct: 419 LDP-----AGRLTREGWKLAELPIDPHLGKMLAFAEKRRVLPELLVIAAYLSIQDPQERP 473 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 ++KQQA+DE HRR+ DK+SDF+ +NLWN + QQ+ S+ R R ++ N+ R+ EW Sbjct: 474 LEKQQAADEAHRRYRDKKSDFVTILNLWNAI--QQECPSNRQLRVFARRNFYNFNRLLEW 531 Query: 595 QDIYTQLRQVVKELGI-----PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 +++ L +L P E Y ++H ++L G+ HI ++Q Y G Sbjct: 532 RNLAADLADAAADLKWSGAKLPKLLENPPYDQVHQSILAGIPRHIARYMPEEQHYLGTGA 591 Query: 650 ARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 +F IFPGSGLFK P+W+M LVETSRL+ R A I P+++E A HL R Y +P Sbjct: 592 RKFLIFPGSGLFKAKPAPEWLMSFALVETSRLFARQNAAIRPDYLEQAAPHLCTRIYDQP 651 Query: 708 HWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFR 767 +W+ G V A E++T GL I R+V YS+ PA RE+FIR AL G + Sbjct: 652 YWDAESGFVYARERLTFGGLLIHNGRRVLYSKSHPAEAREIFIREALATGSVIIPKTWIE 711 Query: 768 ENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDL 827 ++ + + LE K RR ++D E + E Y + + S + K++ R Sbjct: 712 KSAHVLESLALLEEKVRRPGTILDPEAVVEHYLTLLPEGIDSVKSL----KELIRNDSQD 767 Query: 828 LNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVE 887 + ++E + + DYP+ RL Y F PG DG+T+++P LN + Sbjct: 768 YSITPQDAMQEQFRQWEEGDYPDALAFSGQSFRLRYSFTPGEPEDGLTLYVPSDQLNLLP 827 Query: 888 ESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL----ELPLLDSL 943 +W +PG E V +I++LPKPVR+ P AF VK E PL +L Sbjct: 828 GHALDWLVPGYLPEKVELMIRALPKPVRQAAGPIAETVAAFCEAVKSGAVFSEQPLAAAL 887 Query: 944 ERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQET 1003 LR G V D+ ++P++L + ++ K ++ R ++ +++ + + Sbjct: 888 AEYLRDNLGEPVAPADFDNVRLPEYLTMKLAELNRNGKIVQLHR---EIPASVQQGSRLS 944 Query: 1004 LSAVADDGIEQSGLHIWS-FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQ 1062 + +G W LP E GN K A+PAL DE +S+ L+ E Sbjct: 945 RAVAGAKNYTAAGCTAWPGLKPLPFEVELPNGNGK-TAYPALCDEGESIGQALYLKESEA 1003 Query: 1063 KQAMWNGLRRLLLLNIPSPIKYLHE--KLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1120 + G+ RL L + +K+ + +A+L + N +L+D I+ Sbjct: 1004 RMNHRKGIIRLFKLENAAQLKFFKRTIRFSRQAELSWFLNYRDYADDLLDTAIAAA---- 1059 Query: 1121 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMAL 1180 +++ + F E + EL V + KQ+E + + L R+ Sbjct: 1060 FESDLWEIRDGLAFGIGAEHAKQELGCFVDRMVKQLEGYYANYQ-LGRDLAKRIKAQCPE 1118 Query: 1181 GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENV 1240 +D+K + L F+ + D RYL+ ++ R E+ A P RD ++ + + Sbjct: 1119 SAADMKRHLDFLFRNRFLKSDFV--FEDYPRYLRGVKIRAERAAGAPGRDETKLDAISDY 1176 Query: 1241 QQAWQQWINKLPPARREDEDVKEIRW-MIEELRVSYFAQQ--LGTPYPISDKRILQAMEQ 1297 + +P D+ + W + EE R++ FA + LG P K++ +A E+ Sbjct: 1177 LDRFHLAAESVPEL--TDKPLLHDFWRLTEECRLAVFAPEVPLGERAP--LKKLDKAWEE 1232 Query: 1298 I 1298 + Sbjct: 1233 L 1233 >UniRef50_B2UQA6 ATP-dependent helicase HrpA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UQA6_AKKM8 Length = 1231 Score = 1213 bits (3138), Expect = 0.0, Method: Composition-based stats. Identities = 483/1244 (38%), Positives = 712/1244 (57%), Gaps = 39/1244 (3%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 +LP+S+++ DIL A+R+HQV++V GETGSGKTTQLPK+ MEL +G +G TQPRRLA Sbjct: 6 PDLPISRRRNDILAAMREHQVIVVVGETGSGKTTQLPKMAMELAGEARGRVGCTQPRRLA 65 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +V+ R+AEEL + GG +GY+VRF + +T +K MTDGILLAE Q D L QY T+ Sbjct: 66 AASVSRRVAEELNCDLGGLVGYQVRFEEKAGLDTRLKFMTDGILLAETQHDPDLRQYHTL 125 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHERSLNIDFLLGYL+ LL RR DL+++I+SAT+D FS F APII+V GRTY Sbjct: 126 ILDEAHERSLNIDFLLGYLRLLLGRRRDLRLVISSATLDAGGFSEFFGGAPIIQVEGRTY 185 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL 313 PV+ Y P + + + + AVD L + GD+L+F+ GEREIR+ A+ L Sbjct: 186 PVDFHYLPPL----HDDEELPAHVARAVDWLDTLDDRGDVLVFLPGEREIREVAEKLEGR 241 Query: 314 NLRHTEILPLYARLSNSEQNRVFQS-HSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 NLR+T ILPL+ARL + Q R+F RRIVLATNVAETSLT+PGI YVID G AR+S Sbjct: 242 NLRNTRILPLFARLGLANQQRIFHPEQGYRRIVLATNVAETSLTIPGIIYVIDSGLARVS 301 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 RYS +VQRL IEP+S+ASA QR GRCGRV EG+CIRLYSE D+ RP+FTDPEI R+ Sbjct: 302 RYSPARQVQRLQIEPVSKASARQRAGRCGRVCEGVCIRLYSEKDWEDRPDFTDPEIRRSA 361 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LA +L+M LGL ++ FP + P + + +G R L E+GA+ A +LTP+GR+ Sbjct: 362 LAGALLRMKDLGLPEMPEFPLPDPPSSKLVTEGYRTLREIGALD-----KARQLTPVGRK 416 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 L++LP+DPRLARM+LEAQ + E ++I + L I DPRERP D Q +D+ H ++ +++ Sbjct: 417 LARLPIDPRLARMLLEAQHEQALPEMLVIVAGLGIMDPRERPADAAQKADQAHAQWKEED 476 Query: 553 SDFLAFVNLWNYLGEQQ--KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE-LG 609 SDFL+ + LW + + + N R+ C ++LN+ R+ EW +++ L ++V+E L Sbjct: 477 SDFLSLLKLWKAAWQFREGRRWRKNQLRKWCGKNFLNFNRMMEWFNLWEDLSRLVRETLK 536 Query: 610 IPVNSEPAEYR------EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF-- 661 ++ E IH ++L G+ G+ DAD +EY GA F IFPGSGLF Sbjct: 537 CRISPLEEETERQASFAMIHRSILAGVPRQFGLWDADNREYRGAGGRSFGIFPGSGLFRR 596 Query: 662 KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEK 721 KK +WVM ELV+T+RLW R A+ ++P WVE VA HL + YS W+R QGAV A E+ Sbjct: 597 KKRSEWVMGVELVDTTRLWMRRASILEPGWVELVAPHLCESHYSGARWDREQGAVYAVER 656 Query: 722 VTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEH 781 V GL I+ R+V+Y +I+PA RE+ IR L+ G ++T+ A R LR EV ++E Sbjct: 657 VVCGGLRIIDNRRVHYGRINPAHAREIMIREGLLGGGFRTKPACIRHLETLREEVRQIEL 716 Query: 782 KSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAE 841 K RR D + +E +FEF+++ + D +AR F W + ++ P+ L+ + E Sbjct: 717 KLRRPDQVWCEEGVFEFFNRLVPPDCCTARAFLRWAAGMEKKNPEALHVPPQEAMYEFWG 776 Query: 842 KISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRE 901 K +P+ + + YQ +PGA+ DGVT+ + + L + E EW +PG + Sbjct: 777 KDLLDGFPDEITCKGAEYAVYYQNDPGAEDDGVTLGVHIDQLPDIPEWLPEWGVPGHLAQ 836 Query: 902 LVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK--PLELPLLDSLERELRRMTGVTVDRED 959 L++SLPK +R P A F + PL L + TG Sbjct: 837 RAECLLRSLPKDLRVFLQPISQKAAYFAELRHGLEPDGPLAGKLAEFVEVETGKFCAPSF 896 Query: 960 WHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHI 1019 + +++P L V DD+ ++L G + +L + L K+ A+D + +G+ Sbjct: 897 FDMNRLPAELVTKIWVCDDEGEELAMGTDVAELNNRLGKKLSRRFQETAEDIVSVTGMKE 956 Query: 1020 WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIP 1079 WS G L + + + ALVDE SV +++F++ L+ ++ G R + L Sbjct: 957 WSCGDLEYTVDVAGR----PGYVALVDEGASVGVRVFEDELDAAESHREGCLRFMRLRQT 1012 Query: 1080 SPIKYLHEKLPNKAKLGLYFNPYGK-VLELIDDCISCGVDKLIDANGGPVWTEEGFAALH 1138 + +L K P K + L + G+ +D + + I T E FAA Sbjct: 1013 DQLNHLRRKFPLKLEGKLSLHMLGREPSTNAEDLVDVAAE--IAMGRPLPRTAEQFAAAE 1070 Query: 1139 EKVRAELNDTVVDIAKQVEQILTAVFNIN--KRLKGRVDMTMALGLSDIKAQMGGLVYRG 1196 +R L D ++A E + + L+ V T +D++ Q+ L+ Sbjct: 1071 MNLRQNLFDAAHNVADIWELVAGTEHAVRDFTALQKGVRHTE-RITADLQRQLDWLLRPR 1129 Query: 1197 FVTGNGFKRLGDTLRYLQAIEKRLEKLAVDP-HRDRAQMLKVENVQQAWQQWINKLPPAR 1255 F+ +G +RL D RY+Q I +R+ ++ P R+ ++ E V W Q + + Sbjct: 1130 FLWAHGAERLPDLKRYMQGIAERIRRIGQQPLARELERLDLFERVYFPWHQVLKEHAG-- 1187 Query: 1256 REDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299 D + +++EE R++ FA + +S+KR++ + E +S Sbjct: 1188 --DLRWMQYGYLLEEYRLAVFAPAISVKGRVSEKRLVASFEALS 1229 >UniRef50_C2KSU4 HrpA family ATP-dependent helicase n=3 Tax=Mobiluncus RepID=C2KSU4_9ACTO Length = 1292 Score = 1179 bits (3050), Expect = 0.0, Method: Composition-based stats. Identities = 524/1340 (39%), Positives = 748/1340 (55%), Gaps = 163/1340 (12%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQ 129 ++TYP LPV++ + +IL+A+R HQV++++G TGSGKTTQLPK+C+E+GRG G+IGHTQ Sbjct: 4 KLTYPPELPVTEARAEILDAMRHHQVIVISGATGSGKTTQLPKMCLEVGRGTNGIIGHTQ 63 Query: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189 PRRLAARTVA RIA E+ G +GY+VRF +V +T +KLMTDGILL+E+ QD L Sbjct: 64 PRRLAARTVATRIAAEMDETLGQTVGYQVRFRQNVGADTRIKLMTDGILLSEMSQDPQLR 123 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-NAPIIE 248 +YDT+IIDEAHERSLNIDF+LGYL+ L+ RPDL +IITSATID +RF+ F + P+IE Sbjct: 124 RYDTLIIDEAHERSLNIDFILGYLQRLVKIRPDLLVIITSATIDSQRFATAFGVDTPVIE 183 Query: 249 VSGRTYPVEVRYRPIVEEAD-----------------------------DTERDQLQAIF 279 V+GRT+PVE+RYRP+V E D E DQ+ I Sbjct: 184 VAGRTFPVEIRYRPLVTEVSPGHLESCAIEPSLNPEKSLEIKETEVDVVDQEIDQVTGIL 243 Query: 280 DAVDELSQESHGDILIFMSGEREIRDTADALNKL-------------NLRHTEILPLYAR 326 AVDEL + GDIL+F++GE +IRDTA AL E+LPLY+R Sbjct: 244 RAVDELVEAGPGDILVFLAGEADIRDTAAALKGHLGHRFVEPDSKSNVPGAIEVLPLYSR 303 Query: 327 LSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 LS + Q +F HS RRIVLATNVAETSLTVPGI YVIDPG ARISRYS +T+VQRLPIE Sbjct: 304 LSEAAQQSIFAPHSLRRIVLATNVAETSLTVPGIVYVIDPGVARISRYSNKTRVQRLPIE 363 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446 PISQASANQR GRCGR GICIRLYS+ DFLSRPE+T+PEI RT+L++VILQM +LGLG Sbjct: 364 PISQASANQRAGRCGRTCPGICIRLYSQQDFLSRPEYTEPEIQRTSLSAVILQMASLGLG 423 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 ++A FPF++ P R++ DGV L +LGA+ T ++ ++T LGR++++LP+DPRLAR++ Sbjct: 424 EVADFPFLDPPSPRSVTDGVLELSQLGALDTRKKPV--RITRLGRKIARLPLDPRLARIL 481 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 L A + G EA+I+ +AL++QD RERP +K+ +DE H RF D+ SDFLA++ LW+YL Sbjct: 482 LAADELGVASEAVIVVAALAMQDVRERPSEKRSEADEMHARFEDERSDFLAYLRLWSYLQ 541 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS------EPAEYR 620 Q+ +LS +AFRR C ++L+YLRVREW D+ QLR++++E+GI S + + Sbjct: 542 RQKGSLSGSAFRRRCSREFLHYLRVREWFDLAKQLREMLQEIGINTRSLNEINVDVVDAN 601 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 +H ALL G+L+ IG + K+EY GAR +F ++PGSGL K WVM AELVETSRL+ Sbjct: 602 ALHQALLYGMLAQIGYWSSQKREYLGARGQKFVVWPGSGLTSKHYDWVMAAELVETSRLF 661 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R AR++PEW+E ++L+ R+Y EP+W A M E+VT+YGL +VA R + + Sbjct: 662 ARTVARVEPEWIEQAGKYLLVRSYFEPYWSLRAQAAMIHERVTLYGLTLVADRAHTLASL 721 Query: 741 ---------DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVD 791 L R LFIRHALV G+W+ AF + N + +E + + + D Sbjct: 722 GSTLVENQPARDLARALFIRHALVAGEWRENPAFIQTNRERLVAAQEARVRLQIPGEI-D 780 Query: 792 DETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNF 851 D TL ++D+++ +V SA F++WWK E P L+F +L+ +P+F Sbjct: 781 DFTLESWFDKKLPENVTSAAAFNAWWKTKRFEDPQYLDFPWELLV---PASEDAQQFPDF 837 Query: 852 WHQGNLKLRLSYQF---------EPGAD--------------------------ADGVTV 876 W+Q L L+Y F P AD ++GVT+ Sbjct: 838 WNQNETLLPLAYTFGGKRGGITTAPTADIHRNTTQSKRHKSSRIPQREIDVVDLSEGVTI 897 Query: 877 HIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK--- 933 IP L ++ +GF+W IPG RE ++A IK+LPK VR+ VPA E + Sbjct: 898 IIPERSLETIDPTGFDWPIPGALREHLLARIKALPKQVRKKVVPAAALVEEIWEPISAYL 957 Query: 934 ---PLELPLLDS-LERELRRMTGVTVDREDWHW--DQVPDHLKITFRVVDDKNKKLKEGR 987 P E P LD + + V + R D + +P++ + F ++ K + L +G Sbjct: 958 GVNPSERPSLDQVFSQAIATARRVELSRGDLSAMHEALPENQRNHFAIITAKGRVLAKGD 1017 Query: 988 SLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDE 1047 L++ L + + Q +W + ++ +K +Y AL Sbjct: 1018 DFSVLRNTL----------IVNTTTHQG--KVWHQQEAEKAKVEKPRDYAAALTEALE-- 1063 Query: 1048 RDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLE 1107 P + + L +PY Sbjct: 1064 --------------------------------LPQTRVITRWRGAEAAALAASPYPSTAA 1091 Query: 1108 LIDDCISC---GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVF 1164 L+ S + + A G + E+ L + DTV I + V + Sbjct: 1092 LVQAAQSAAGVALTQEWLATGHQLEGEDDLVQLQAECANRFEDTVYRILQGVAATMHQRV 1151 Query: 1165 NINKRL---KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLE 1221 + + + + + T+ + +I + L+ F+ +K L +YLQA RLE Sbjct: 1152 ELQRVIENARAKASPTLHHTIQEIVNHVNQLLEGDFLARTPYKWLQRLEKYLQADTLRLE 1211 Query: 1222 KLAVDPHRDRAQMLKVENVQQAWQQWINKL---PPARREDEDVKEIRWMIEELRVSYFAQ 1278 K + D ++ V + ++ + + P ++EI W++EE R+S FAQ Sbjct: 1212 KARHNSAADAELSQRLAEVTRDFETSVATIKARPFHADTHRKIQEIYWLLEEFRLSLFAQ 1271 Query: 1279 QLGTPYPISDKRILQAMEQI 1298 QLGT +S KR+ + + +I Sbjct: 1272 QLGTIEKVSAKRLRKLLAEI 1291 >UniRef50_Q12AX3 ATP-dependent helicase HrpA n=1 Tax=Polaromonas sp. JS666 RepID=Q12AX3_POLSJ Length = 1402 Score = 1173 bits (3036), Expect = 0.0, Method: Composition-based stats. Identities = 457/1155 (39%), Positives = 667/1155 (57%), Gaps = 110/1155 (9%) Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGE 300 AP+I VSGR +PVE RYRP + + D AI D VDEL Q H GDIL+F+ GE Sbjct: 261 PAPVIMVSGRMFPVEQRYRP---FEESRDYDLNDAIADGVDELWQNPHSAGDILVFLPGE 317 Query: 301 REIRDTADALNKLNL-----RHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSL 355 REIR+ AD L K R+ E+LPL+ARLS +EQ+R+F H+GRRIVLATNVAETSL Sbjct: 318 REIREAADHLRKHLAHQPLTRNAEVLPLFARLSQAEQDRIFDGHTGRRIVLATNVAETSL 377 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 TVPGI+YVID GTAR+ RYS+R+KV++L +EP+SQA+ANQR GRCGRV++GICIRLY E Sbjct: 378 TVPGIRYVIDAGTARVKRYSFRSKVEQLMVEPVSQAAANQRAGRCGRVADGICIRLYDEQ 437 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 DF+ R FTDPEILR++LA+VIL+M AL LG + F F+E P +R I DG +LL ELGA+ Sbjct: 438 DFVGRSRFTDPEILRSSLAAVILRMKALHLGAVEDFAFIEPPQRRAIADGYQLLAELGAV 497 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 D + LTP+GR L++LP+DPR+ RM+LEA+ + E ++I SALS+QD R+RPM Sbjct: 498 DDDNE-----LTPVGRTLAKLPLDPRVGRMILEAKDRQALDEVLVIASALSVQDVRDRPM 552 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQ-------------------------- 569 D+Q +D+ H +F D++S+F ++ LW +LG+ + Sbjct: 553 DRQAQADQAHAKFDDEKSEFSGYLKLWKWLGDSRGGRPSPQPSPKGRGGKTELLPLPLGE 612 Query: 570 --------KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE 621 +S+ + L R +Y+N RVREW+DI++QL VV E G +N PA Y + Sbjct: 613 GRGEGSPVHKISNRQYETLLRENYVNVRRVREWRDIHSQLHSVVGEQGWHLNERPASYEQ 672 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 +H+++L GLL +IG K ++ Y GAR RF PG+ L KKP +W++ AELVET+RL+G Sbjct: 673 LHLSMLCGLLGNIGCKSDEEDWYLGARGIRFYRHPGAKLSKKPGRWIVAAELVETTRLFG 732 Query: 682 RIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQID 741 R A I+P+W+E VA HL+K+ +PHWE+ V A E+ T+YGL + R+VN+ ++D Sbjct: 733 RGIANIEPQWIEQVAGHLLKKQLLDPHWEKKAAQVTALERATLYGLVVYNGRRVNFGRVD 792 Query: 742 PALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQ 801 P RE+FIR ALV G+W T+ F NL+L +V++LEHK+RR+D+LVD+E ++ FYDQ Sbjct: 793 PVSAREIFIREALVAGNWDTKLTFLAANLRLVQQVQDLEHKARRQDVLVDEELIYAFYDQ 852 Query: 802 RISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRL 861 ++ DV S +SW+K ++ P LL + L++ A I+ +P G + + Sbjct: 853 QLPADVCSGASCESWYKDEVKKQPKLLLLTREELMRHEAAGITTQAFPKTLRLGGVDCMV 912 Query: 862 SYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPA 921 +Y EPG DGVTV +PL LNQV E EW +PG+ ++ V ALIK+L + R VP Sbjct: 913 TYLHEPGDPKDGVTVDVPLFALNQVNEERCEWLVPGMLKDKVQALIKTLHQRPRSRLVPL 972 Query: 922 PNYAEAFLGRV----KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVD 977 P A G++ L D++ + +R T + + R D D +P HL + FRV+D Sbjct: 973 PETAARMAGQLLQPEVFGSGSLTDAILKLVRDATSLDIKRADMKLDMLPAHLFMNFRVID 1032 Query: 978 DKNKKLKEGRSLQDLKDALKGKVQETLSAVAD-DGIEQ---------------------- 1014 + ++L GR+L LK L + + A+A + + Sbjct: 1033 EHGRQLGAGRNLGALKGELGPQARGAFQALAGLKNLARPAASAPNEESDRPSAQVPTGQA 1092 Query: 1015 --------------------SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIK 1054 WSFG+LPE E ++G+ + +PAL+D D+V I+ Sbjct: 1093 AIKNVAKGSTQSESHPVKVAERYTSWSFGELPELMEIRKGSQTLIGFPALIDLGDAVTIE 1152 Query: 1055 LFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF---------NPYGKV 1105 +FD P GLRRL L I +KYL + LP+ K+ + + G + Sbjct: 1153 VFDEPDLAAVKHRAGLRRLFSLQIKDALKYLEKNLPDLQKMATAYMLVGRAADNSGGGTL 1212 Query: 1106 LELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFN 1165 EL I +D+ + P E F + R L ++A+ ILT Sbjct: 1213 EELRAQIIEVALDRAFLLDPLPT-GEADFKRRVDDGRGRLTLIASEVARLAAGILTEYAV 1271 Query: 1166 INKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAV 1225 +++K + ++D Q+ L+ + F+T + +L +RYL+AI RLEK Sbjct: 1272 AQRKIKDTKNAA--EAVADASQQLQRLMPKRFLTTTPYPQLQHFVRYLKAITLRLEKWRA 1329 Query: 1226 DPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYP 1285 DP RD A++ ++ +Q + + + + D ++E RW++EELRVS+FAQ+L TP P Sbjct: 1330 DPARDAARLAELRPQEQRYWRLVAE--RKGATDARMQEFRWLLEELRVSFFAQELRTPQP 1387 Query: 1286 ISDKRILQAMEQISG 1300 +S KR+ +A +Q++G Sbjct: 1388 VSVKRLDKAWQQLNG 1402 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 125/192 (65%), Positives = 146/192 (76%), Gaps = 9/192 (4%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-------KG 123 IT+P++LPVS K+ DI A++ HQV+IV GETGSGKTTQLPKI + +GRG Sbjct: 23 ITFPESLPVSGKRDDITAALQAHQVIIVCGETGSGKTTQLPKIALAMGRGKLNYPAGQGK 82 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 LIGHTQPRR+AA +VA RIAEELKT G +GYKVRF D +S + VKLMTDGILLAE Q Sbjct: 83 LIGHTQPRRIAASSVAKRIAEELKTPLGEVVGYKVRFQDRLSRDASVKLMTDGILLAETQ 142 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D LL YDT+IIDEAHERSLNIDFLLGYL++LLPRRPDLK+IITSATID +RF+ +F Sbjct: 143 TDPLLRAYDTLIIDEAHERSLNIDFLLGYLRQLLPRRPDLKVIITSATIDAQRFADYF-- 200 Query: 244 APIIEVSGRTYP 255 A GR P Sbjct: 201 ASSAPAPGRPKP 212 >UniRef50_B3DQA9 HrpA-like helicase n=21 Tax=Bifidobacteriaceae RepID=B3DQA9_BIFLD Length = 1378 Score = 1163 bits (3009), Expect = 0.0, Method: Composition-based stats. Identities = 518/1409 (36%), Positives = 736/1409 (52%), Gaps = 214/1409 (15%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHT 128 + YP LPVS + +I A++ QVVIV+G+TGSGKTTQLPKI +ELGRG G I HT Sbjct: 2 KYEYPAELPVSAARDEIASAVKRSQVVIVSGQTGSGKTTQLPKILLELGRGTHGKQIVHT 61 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AARTVA RIA E+ + G +GY+VRF+D S +T ++++TDGILLA+IQ+D L Sbjct: 62 QPRRIAARTVAERIASEMGVKLGDEVGYQVRFTDESSPSTRLRVVTDGILLAQIQRDPKL 121 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA---- 244 +YDTIIIDEAHERSLNIDFLLGYL LLP+R DLK+IITSATID +F HF +A Sbjct: 122 TRYDTIIIDEAHERSLNIDFLLGYLTALLPQRRDLKLIITSATIDSVKFQEHFEHALHEK 181 Query: 245 -PIIEVSGRTYPVEVRYRPI---------------------------------------- 263 P+IEVSGRT+PV+V Y P+ Sbjct: 182 VPVIEVSGRTFPVQVVYEPLGTAPALMREVPGFAVGARPGDADYDELASAIAESDSDRPR 241 Query: 264 ----VEEADDTERDQLQAIFDAVDEL-----SQESHGDILIFMSGEREIRDTADALNKLN 314 ADD D A+ A EL + DIL+F SGER+I + AL Sbjct: 242 GRSGASYADDGITDMPTAVARACAELVIHSSHERGPRDILVFASGERDIHEFEAALRHHY 301 Query: 315 LRH---------TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 EI+PL+ARLS ++Q++VF+SH +RIV+ATNVAETSLTVPGI+YV+D Sbjct: 302 GPRADDMRRPDAIEIMPLFARLSAADQHKVFESHLHQRIVIATNVAETSLTVPGIRYVVD 361 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 PG+ARISRYS KVQRLPIEPISQASA+QR GRCGRV++GI IRLYS +D+ +RP FT+ Sbjct: 362 PGSARISRYSKTAKVQRLPIEPISQASADQRSGRCGRVADGIAIRLYSREDYETRPRFTE 421 Query: 426 PEILRTNLASVILQMTALGL----GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PEILRT+L +V+L M ++G+ D+ F F++ PD + + DG L EL AI + Sbjct: 422 PEILRTSLGAVVLHMLSVGVARTAEDVTNFGFIDPPDMKAVSDGFNELTELKAI--GRKR 479 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHG---CVREAMIITSALSIQDPRERPMDKQ 538 LT GRQL+++P+D RL RMV+EA K G + + +++ + LS+QDPRERP DK+ Sbjct: 480 GEVTLTHTGRQLARIPIDVRLGRMVIEAAKTGSPNLLAQVLVVVAFLSLQDPRERPDDKR 539 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 + +D H R+ D+ SDFL +N+W+ + + S+NA RR+C+T+Y ++LR+R+W+D+ Sbjct: 540 EDADRIHNRYADETSDFLTALNIWDRVFQADGDPSNNALRRICKTEYFSWLRMRQWKDLV 599 Query: 599 TQLRQVVKELGIPVN-------------------------SEPAEYREIHIALLTGLL-- 631 +QLRQ+ KEL V + IH ++L GLL Sbjct: 600 SQLRQMCKELKFKVGDPLPASRPGLEIRQLPLNQQAAHSLCCAWDADGIHKSMLAGLLSM 659 Query: 632 --SHI-------------------GMKDAD---KQEYTGARNARFSIFPGSGLFKKPPKW 667 + MK A K +Y GAR RF++FP S + KK P W Sbjct: 660 MGMQVVREPKASDFAGLTGSARARAMKRAQKQSKNDYQGARGTRFALFPASAVAKKTPSW 719 Query: 668 VMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGL 727 VM ELVETSRLW R +A IDP W EP+A L + TY+EPHW ++G+ +AT +V +YGL Sbjct: 720 VMSTELVETSRLWARYSAAIDPAWAEPLAGQLTRTTYAEPHWSGSRGSAVATARVLLYGL 779 Query: 728 PIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHA---FFRENLKLRAEVEELEHKSR 784 PIV R V + +I+P R+ IR LVEGD Q R + F +N + + + ++R Sbjct: 780 PIVQDRAVQWGRINPLEARDFLIRQGLVEGDIQQRFSYDDFVGKNRDILEDAADDASRTR 839 Query: 785 RRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIK-EGAEKI 843 + V DE LF+FY+ I +DV S WWK P+LL+F+ + + + ++ + Sbjct: 840 QLADTVSDEDLFDFYNAVIPNDVTSVSDLAKWWKSEHDRQPNLLDFDPAKVERLASSDSV 899 Query: 844 SKLDYPNFWHQGN-----LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGL 898 S DYP+ WH + LRLSY ++P ADGVTVH+PL L+++ F W +PGL Sbjct: 900 SLDDYPDHWHTTGSDGQPIDLRLSYVYDPADPADGVTVHVPLKALSRITPDQFTWNVPGL 959 Query: 899 RRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPL------------------- 939 EL++++IK+LPK +R FVPAP+ A A + L Sbjct: 960 LDELILSMIKALPKQLRVQFVPAPDAARAIRDWIDEHYPDLPGSGSQQKPNLPPVDEDGT 1019 Query: 940 ---LDSLERELRRMT----GVTVDREDWHW---DQVPDHLKITFRV-------------V 976 L + G + E +++ +L++TF V Sbjct: 1020 TVGWPDLAHVFTKAAIATKGAQIHPEVLGPELVERLSPYLRVTFSVEQQLPAGKHPRGRR 1079 Query: 977 DDKN--KKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRG 1034 + K L + L+ L+ + + + + +Q+G Sbjct: 1080 HARGPIKVLGVSKDLKALQRKFAAQAEASARQMVKKQADQAG------------------ 1121 Query: 1035 NYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLR-RLLLLNIPSPIKYLHEKLPNKA 1093 ++ V+ + + R L + P + + + Sbjct: 1122 -----------EQGKLVSQANLLHKAGATTESRATMLWRGALDALRLPAERISSRWLGTE 1170 Query: 1094 KLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIA 1153 L L PY +L++D V +L+ N + +E A VR DTV +A Sbjct: 1171 ALMLASAPYKSTKDLVEDLQLATVKRLM-PNVDRLSDDEALANAVLDVREVYEDTVYQVA 1229 Query: 1154 KQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYL 1213 V +L A ++K G+ D+ M L I+ + LVY GF+ L RYL Sbjct: 1230 HDVIAVLKAYAEVDKATGGKADLPMLSVLQSIRDHIATLVYPGFIGRTPPDALKSLSRYL 1289 Query: 1214 QAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKL------PPARREDEDVKEIRWM 1267 +A RL K D +RD + + +Q + + + P + ++ RWM Sbjct: 1290 RADLSRLNKAKTDKNRDVKWAWQADEARQVVDKALARAKAEPAGPKHEALMKQAEQARWM 1349 Query: 1268 IEELRVSYFAQQLGTPYPISDKRILQAME 1296 +EE VS +AQ+LGT P S RI +A+ Sbjct: 1350 LEEFYVSLWAQELGTKGPASLNRIKKALA 1378 >UniRef50_C4KC73 ATP-dependent helicase HrpA n=1 Tax=Thauera sp. MZ1T RepID=C4KC73_THASP Length = 1411 Score = 1155 bits (2989), Expect = 0.0, Method: Composition-based stats. Identities = 495/1041 (47%), Positives = 654/1041 (62%), Gaps = 49/1041 (4%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ-----AIFQEMAKEIDQAAGKVLLREAAR 68 D + DR R R + D + + + ++++ + R AA Sbjct: 15 PNFDDCLSGDRPRLRRMARDLSHPSRADERATAQRLRLRADFDALLERSRAALRARRAAL 74 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 P +P LPVS ++ +I A+ HQV+IV GETGSGKTTQLPKI M LGRG+ GLIGHT Sbjct: 75 PVPDFPPELPVSGRRDEIATALAAHQVIIVCGETGSGKTTQLPKIAMTLGRGVAGLIGHT 134 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRRLAAR A+RIA+ELK+ G +GYK+RF+D + + VKLMTDGILLAE Q D LL Sbjct: 135 QPRRLAARATASRIAQELKSPLGEVVGYKIRFTDKTGERSHVKLMTDGILLAETQTDPLL 194 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 243 YDT+IIDEAHERSLNIDFLLGYLK LLPRRPDLK+++TSAT+D ERF+RHF + Sbjct: 195 AAYDTLIIDEAHERSLNIDFLLGYLKTLLPRRPDLKVVVTSATLDAERFARHFADAAGKP 254 Query: 244 APIIEVSGRTYPVEVRYRPI------------------VEEADDTERDQLQAIFDAVDEL 285 AP+IEVSGR YP+E+RYRP+ E A D RD + A+ DAVDE Sbjct: 255 APVIEVSGRLYPIEMRYRPVESEEIDPAAAARSAAKGGREAAKDRSRDLMDALVDAVDEA 314 Query: 286 SQESHGDILIFMSGEREIRDTADALNK-LNLRHTEILPLYARLSNSEQNRVFQSHSGRRI 344 + GD+L+F+ GEREIR+ A+AL K +L TEILPL+AR S EQ RVF + +GRR+ Sbjct: 315 QRCGPGDVLVFLPGEREIREAAEALRKAHHLPGTEILPLFARQSAQEQARVFSASNGRRV 374 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VL+TNVAETSLTVPGI+YV+D G ARI RYS R KV++L +E I++++A QR GRCGRV Sbjct: 375 VLSTNVAETSLTVPGIRYVVDTGLARIKRYSPRNKVEQLQVEKIARSAAQQRAGRCGRVM 434 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 +GICIRLY EDDF RP TDPEILR++LA VIL+M AL LG + FPF++AP R I D Sbjct: 435 DGICIRLYDEDDFNRRPAHTDPEILRSSLAGVILRMKALKLGAVEDFPFIDAPGARLIGD 494 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 G LL ELGA++ D++ KLTP G +L++LP+DPR+ RM+L A+ G + E ++I +A Sbjct: 495 GYALLAELGAVSDDDER---KLTPTGVELAKLPLDPRIGRMILAARDRGALAELLVIAAA 551 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESD----FLAFVNLWNYLGEQQKALSSNAFRRL 580 LS+QDPRERP D A+D+ H RF E D FL + +LW E Q+ SS+ + Sbjct: 552 LSVQDPRERPQDSPGAADQAHARFRGGEQDQKSEFLWYWHLWKAWDEVQRHESSSKQKAW 611 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD-- 638 C+ +LNY+R+REW+D++ QL + E G N +PA Y IH ALL GLL +IG K Sbjct: 612 CKKHFLNYMRMREWRDVFAQLHTLCAEHGWKENEQPANYEAIHKALLAGLLGNIGCKVED 671 Query: 639 ---ADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 Y GAR +F PGS L KK KW+M AE VETSRL+GR ARI+PEWVE V Sbjct: 672 ASGPQAGAYLGARGIKFWPHPGSALAKKAGKWIMAAEQVETSRLFGRCIARIEPEWVEEV 731 Query: 696 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 HLIKR EPHW +A GAV A E+ T+YGL I R V Y IDPALCRELFIR LV Sbjct: 732 GGHLIKRQVFEPHWSKASGAVRAWERGTLYGLVIYPRRGVAYRDIDPALCRELFIREGLV 791 Query: 756 EGDWQTRH----AFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISAR 811 +G+ AF N +L AE+E LEHKSRR D+LVD+ + FYD ++ +V Sbjct: 792 QGEIAEGPARAMAFLAHNQRLVAEIERLEHKSRRPDVLVDETLIEAFYDSKLPAEVCDLA 851 Query: 812 HFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADA 871 ++W K + P LL+ + L++ AE ++ +P KL+L+Y +PG Sbjct: 852 GLEAWRKPAEKAEPKLLHLSREQLMRHDAEGVTTDRFPPTLEVLGQKLKLAYLHQPGEAD 911 Query: 872 DGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGR 931 DGVT+ +PL +LNQ+ + EW +PGL E V AL+K++P+ R P A AF+ Sbjct: 912 DGVTLAVPLAMLNQIPANRCEWLVPGLLEEKVAALMKTVPQKHRHRLQPVAESAAAFMAV 971 Query: 932 VKPLE----LPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGR 987 + E PLL L+R + + + E + + + H + FRV+D+ + + + R Sbjct: 972 FEAGEFDTDEPLLKMLQRFVEERVQLKLPLESFRPENLKPHCFMNFRVIDEHGRLMGQSR 1031 Query: 988 SLQDLKDALKGKVQETLSAVA 1008 +L +L+ + +V SA Sbjct: 1032 NLMELRARFREQVAARFSAAK 1052 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 4/238 (1%) Query: 1015 SGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLL 1074 SG W+FG LPE E + +V +PAL D+ DSV+++ D P E + GL RL Sbjct: 1150 SGFTAWTFGALPELLEVRVAGREVIGFPALHDDGDSVSLRPHDTPEEASRVHRRGLARLF 1209 Query: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGF 1134 LN+ ++ + LP +L L + +G EL I + + P + F Sbjct: 1210 ALNLKDQVRAVER-LPGLRELALQYMGFGTEAELKARLIEATLGRCCLLEPLPT-DADAF 1267 Query: 1135 AALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVY 1194 A + ++ ++ + + Q+L + KRL G T ++DI+ Q+G L+ Sbjct: 1268 AKRCAEAKSRVSLVAQEFMRLTGQLLVEHAALQKRLSGL--KTFPEVVADIQGQLGALLP 1325 Query: 1195 RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLP 1252 + F+ + +L RYL+ RL+KL +P RD VE + + P Sbjct: 1326 KDFLVAFEWDKLAHFARYLKGAAVRLDKLRNNPARDAPGHGGVEAARPGLGARAPRPP 1383 >UniRef50_C5BVQ3 ATP-dependent helicase HrpA n=3 Tax=Bacteria RepID=C5BVQ3_BEUC1 Length = 1471 Score = 1111 bits (2873), Expect = 0.0, Method: Composition-based stats. Identities = 488/1121 (43%), Positives = 655/1121 (58%), Gaps = 89/1121 (7%) Query: 265 EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL----------- 313 + D E DQ AI AVDEL+ GD+L+F SGEREIRD ADAL Sbjct: 353 PQQADEELDQPTAICRAVDELTALGPGDVLVFCSGEREIRDAADALASHLGTRYTAPGAR 412 Query: 314 --NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARI 371 E+LPLYARLS +EQ+RVF H RR+VLATNVAETSLTVPGI YV+D G ARI Sbjct: 413 NTAPGAVEVLPLYARLSAAEQHRVFAPHPYRRVVLATNVAETSLTVPGIHYVVDTGLARI 472 Query: 372 SRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRT 431 SRYS RTKVQRLPIEPISQASANQR GRCGRV++G+ IRLYS DF RPEFT+PEILRT Sbjct: 473 SRYSQRTKVQRLPIEPISQASANQRSGRCGRVADGVAIRLYSRGDFDRRPEFTEPEILRT 532 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD--EQASAYKLTPL 489 +LASV+LQM ALGLG + AFPFV+ PD R I+DGV LL ELGAI + A +LT + Sbjct: 533 SLASVVLQMAALGLGRMDAFPFVDPPDTRAIRDGVALLTELGAIEEGQGDDAEDVRLTDV 592 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 GRQL+QLP+DPRL RM++EA + G VRE M++ +ALS+QD RERP D QQA+D+KHRRF Sbjct: 593 GRQLAQLPIDPRLGRMLVEAGRLGVVREVMVLVAALSVQDVRERPADHQQAADDKHRRFA 652 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 D SDFL LW YL +QQKA+ S+AFRRLCR+++L+YLRVREWQD++ QLRQ+ K LG Sbjct: 653 DPTSDFLTLYTLWTYLQDQQKAMGSSAFRRLCRSEFLHYLRVREWQDVHAQLRQLGKGLG 712 Query: 610 IPVNSEPAE--------------YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 + + +H ALL GLLSH+G D ++EY GAR +RF +F Sbjct: 713 LRPEPRADDAPAGVGDVRKPKVDSDAVHRALLAGLLSHLGSWDERRREYAGARGSRFVVF 772 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGA 715 PGS L +KPP W++ AELVETSRL+ R AARI PEW E +HL+KRTYS P W QGA Sbjct: 773 PGSSLARKPPAWIVAAELVETSRLFARTAARIQPEWAEQAGEHLVKRTYSGPFWSAKQGA 832 Query: 716 VMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAE 775 M EKV ++G+PIVA R V ++++DPA RE+F+R+ALVEG+W+T HAF R N ++ E Sbjct: 833 AMCHEKVLLFGVPIVADRVVPFARVDPAAAREMFLRNALVEGEWRTHHAFVRRNAEVLDE 892 Query: 776 VEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSML 835 ++E ++RRR +LVDDE L +F+D+R+ V +AR FD+WWK R PDLL + +L Sbjct: 893 ARQIEDRARRRGLLVDDEALVDFFDERVPESVTTARAFDAWWKDARRADPDLLTYTLDLL 952 Query: 836 IKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQI 895 + A + +P W QG+L L L+YQF PG DADGVTVH+P+ +LN+V +GF+W + Sbjct: 953 VP-TAHAVDDAGFPRTWTQGDLTLPLTYQFTPGTDADGVTVHVPIAVLNRVRPAGFDWLV 1011 Query: 896 PGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP---------LELPLLDSLERE 946 PGL +LV A I++LPK VR VPAP+ A+A + R+ ++ Sbjct: 1012 PGLLTDLVTATIRALPKQVRVQLVPAPDVAQAVVARLPDWADVAPAPDGAPSFHEAFASA 1071 Query: 947 LRRMTGVTVDREDWHW--DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETL 1004 +R + V V E +++P HL++TFRV+ ++ ++L EG SL L+ L + Q + Sbjct: 1072 VREVRDVVVPAEALEEADERLPAHLRMTFRVLGERGQELDEGHSLVALQRRLAAQAQSAV 1131 Query: 1005 SAVADDGI---------------------------EQSGLH-------IWSFGQLP---- 1026 + + EQ G + ++ +P Sbjct: 1132 RSAVRAALADASRTAAVPAGPVASPETTPTTAESGEQQGRTGGAEVDTVRTWADVPGEAI 1191 Query: 1027 --ESYEQKRGNYKVKAWPALVDERD------SVAIKLFDNPLEQKQAMWNGLRRLLLLNI 1078 E ++ +PALV E D VA+++ + + +G+R LLL Sbjct: 1192 PAELATTGPAGLDIRGYPALVVEPDPDGGRTRVALRVLADAERARAQHADGVRALLLQEF 1251 Query: 1079 PSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP-VWTEEGFAAL 1137 P + + + L L +PY L+ D V +L V + + Sbjct: 1252 AIPTARVTSRWTGREALTLASSPYRDTDALVRDVQVAAVAQLTAGTDLTTVRDAASYRRV 1311 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 VR L D V + +V + L A ++ ++ M + L+ ++ LVY GF Sbjct: 1312 RADVRDHLEDAVYGVVARVVEALQAHRELDSAVRASTSMALLGTLTQVRDHAASLVYDGF 1371 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARRE 1257 V + L RYL+A RL K A +P RD +V ++ A + Sbjct: 1372 VARTPPESLRHLARYLRADGYRLAKAAENPGRDATLAWEVSELEDALASVRATH-LSPDR 1430 Query: 1258 DEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 + +RW +EELRVS FAQQLGT P+S KRI A+ Q+ Sbjct: 1431 AARAEAVRWQLEELRVSLFAQQLGTAQPVSAKRIRTALAQV 1471 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 150/232 (64%), Positives = 180/232 (77%), Gaps = 15/232 (6%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 + ++ +R AA P + +P +LPVS ++ DI AIRDHQVV+VAGETGSGKTTQLPKIC+E Sbjct: 47 SEEQLAVRRAALPTLAFPPDLPVSARRDDIAAAIRDHQVVVVAGETGSGKTTQLPKICLE 106 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 LGRGI G IGHTQPRR+AAR+VA RIA E E GG IGY+VRF+DHV T+VK+MTDG Sbjct: 107 LGRGITGTIGHTQPRRIAARSVAERIASECDVELGGAIGYQVRFTDHVGPTTLVKVMTDG 166 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 ILL+EIQ+D L +YDTII+DEAHERSLNIDF+LGYL+ LLPRRPDLK+IITSATID ER Sbjct: 167 ILLSEIQRDPTLSRYDTIIVDEAHERSLNIDFILGYLRRLLPRRPDLKVIITSATIDSER 226 Query: 237 FSRHFN---------------NAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 F+ HF AP+IEV+GRTYPVE+RYRP+V +D E D Sbjct: 227 FAAHFAQRDGVVVPRIGDPGTPAPVIEVNGRTYPVEIRYRPLVPGEEDEEPD 278 >UniRef50_D1BTV1 ATP-dependent helicase HrpA n=4 Tax=Bacteria RepID=D1BTV1_XYLCX Length = 1624 Score = 1098 bits (2841), Expect = 0.0, Method: Composition-based stats. Identities = 547/1192 (45%), Positives = 701/1192 (58%), Gaps = 221/1192 (18%) Query: 29 RRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILE 88 RR + P P ITYP+ LPVS +++DI Sbjct: 37 RRGPEGAGQRGPQRTGQRGPRRVSRAHLDKLAATRTAVVVPPITYPEQLPVSARREDIAT 96 Query: 89 AIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKT 148 AIR++QVV+VAGETGSGKTTQLPKI ++LGRG G IGHTQPRR+AAR+VA RIAEEL+T Sbjct: 97 AIRENQVVVVAGETGSGKTTQLPKILLDLGRGRAGQIGHTQPRRIAARSVAERIAEELRT 156 Query: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 G +GY+VRF+D S+ T+VK+MTDGILLA+IQ+D L+ YDTI+IDEAHERSLNIDF Sbjct: 157 TLGEIVGYQVRFTDQSSEQTLVKVMTDGILLAQIQRDPELLAYDTIVIDEAHERSLNIDF 216 Query: 209 LLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--------------------APIIE 248 LLGYL LLPRRPDLK+IITSATID +RF+ HF+ AP++E Sbjct: 217 LLGYLSRLLPRRPDLKVIITSATIDSQRFAEHFSPSHLAALGGAPEAVVDVLPKAAPVVE 276 Query: 249 VSGRTYPVEVRYRPIVEEADD-------TERDQLQAIFDAVDELSQESHGDILIFMSGER 301 VSGRTYPVE+RYRP+V E + ERD + I +A DEL + GDIL+F+SGER Sbjct: 277 VSGRTYPVEIRYRPLVPEVSENGLQKKGEERDLVTGIIEACDELMRCGPGDILVFLSGER 336 Query: 302 EIRDTADALNK---------LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAE 352 EIRD D L + +H EILPLY+RLS +EQ+RVF +H GRRIVL+TNVAE Sbjct: 337 EIRDALDGLEGHLGARARDPRHPQHVEILPLYSRLSAAEQHRVFAAHPGRRIVLSTNVAE 396 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TSLTVPGI YV+D G ARISRYS TKVQRLPIE ISQASANQR GR GRV++G+ +RLY Sbjct: 397 TSLTVPGIHYVVDTGLARISRYSKATKVQRLPIEAISQASANQRSGRSGRVADGVAVRLY 456 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEAPDKRNIQDGVRL 468 S+ DF +RPE+T+PEILRT+LASV+LQM A+G+ ++A FPFVE PD R ++DGV L Sbjct: 457 SQADFEARPEYTEPEILRTSLASVLLQMIAVGVVESPDEMARFPFVEKPDTRAVRDGVML 516 Query: 469 LEELGAITTDEQASAYKL------------------------------------------ 486 L ELGA+ T + + + Sbjct: 517 LRELGALETVVEPTPAVVEPVETTPSPVVEPPSPVVEPVETTPPPSDVVSTGSTTGGRTS 576 Query: 487 -----------TPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 T +GRQL+QLP+DPRLARM++E + G RE +I +ALS+QDPRERP Sbjct: 577 TTGAGRTTTRLTTVGRQLAQLPMDPRLARMIIEGARRGAAREVAVIAAALSVQDPRERPA 636 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 + ++ +D+ H RF D SDFL+++NLW YL +QQ+ LS +AFRRLC+ ++LNYLRVREWQ Sbjct: 637 EVRERADQLHARFADPTSDFLSYLNLWEYLRDQQRDLSGSAFRRLCKAEHLNYLRVREWQ 696 Query: 596 DIYTQLRQVVKELGIPVNSEPA-------------------------------------- 617 D+ QLRQ+ ELGI ++S + Sbjct: 697 DVVAQLRQMANELGINLSSRASVVEPVETTPRVDGGVVSTGSTTAEGADDGQPRSGEWRR 756 Query: 618 --EYREIHIALLTGLLSHIGMKDAD--------------------------KQEYTGARN 649 + IH ALL GLLS +GM+D + EY GAR Sbjct: 757 VWDGDTIHRALLAGLLSQVGMQDTGEIKASSVAHLKGEARARALRQQAKRVRNEYLGARG 816 Query: 650 ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHW 709 ARF+IFPGS L KKPP WVM ELVETSRLW R ARI PEW E +A L +RTYS+PHW Sbjct: 817 ARFAIFPGSPLSKKPPAWVMAGELVETSRLWARDVARIQPEWAEELAGDLARRTYSDPHW 876 Query: 710 ERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFREN 769 QGA MATEKV +YG+PIV+ R V ++++DP RE+FIRHALV+G+W T H FF EN Sbjct: 877 STKQGAAMATEKVLLYGVPIVSDRPVLFARVDPEAAREMFIRHALVQGEWTTHHTFFAEN 936 Query: 770 LKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLN 829 +L E E++E +SR+R ++ ++ LF FYD+R+ V+SARHFD WW + RETPDLL Sbjct: 937 RRLLEEAEQVEARSRQRGLVASEDDLFAFYDERVPASVVSARHFDQWWSRARRETPDLLT 996 Query: 830 FEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEES 889 F L+ A + +P+ W QG L L L+YQF PG+DADGVTVH+PL +L ++ S Sbjct: 997 FRLEDLVDVDA--VDPSQFPSSWTQGELTLPLTYQFRPGSDADGVTVHVPLSVLPRLSPS 1054 Query: 890 GFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAF-------------LGRVKPLE 936 GF+W +PGL EL +A I+SLPK VR VPAP+ A + R + Sbjct: 1055 GFDWMVPGLLEELCVATIRSLPKAVRVQLVPAPDVGNAVAGWLRQNTPTWEDMARAGDMA 1114 Query: 937 LPLLDSLERELRRMTGVTVDREDWHW---DQVPDHLKITFRVV----------------- 976 P + R +R + V V + W +++P HL++TFRVV Sbjct: 1115 EPFHVAFTRAVRALRDVVVPGDAWDTERVERLPAHLRMTFRVVESGVKSGGPTTAAGSRG 1174 Query: 977 ---------------------------DDKNKKLKEGRSLQDLKDALKGKVQ 1001 + E + L L+ L K + Sbjct: 1175 SGRGGRGRGRDGRGSPSAAAAVSPSGTGAAGAAIDESKDLLALQRRLAPKAE 1226 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 25/309 (8%) Query: 1013 EQSGLHIWSFG----QLPESYEQK-RGNYKVKAWPALVDERD-----SVAIKLFDNPLEQ 1062 E+ GL W G +LP+ G V+ +PALV+E +VA+++ + LEQ Sbjct: 1312 ERLGLATWPDGLPDGRLPDVVSTDLGGGVVVRGYPALVEEPGPKQEPTVALRILADALEQ 1371 Query: 1063 KQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL-- 1120 G+RRLLL + + L L +PY L +D V L Sbjct: 1372 PATHARGVRRLLLAENRLTAGRVTSRWSGTQALTLAASPYRNTNLLAEDLQLATVMALTS 1431 Query: 1121 ----------IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRL 1170 + + E + A VR L D +A V LTA + + Sbjct: 1432 PAADLAPGTPAGPHAVQIRDAESYNAAKAHVRTHLEDETYRVAGHVVAALTAWRTLESEV 1491 Query: 1171 KGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRD 1230 + + + L DI+ L++ GFV+ +RL +RYL+A RLEK PHRD Sbjct: 1492 RKTSSLALLNTLQDIREHAATLIHDGFVSATPPRRLPHLVRYLRAASYRLEKAQASPHRD 1551 Query: 1231 RAQMLKVENVQQ---AWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPIS 1287 ++ +V++ + P ++ E+RW+IEELRVS FAQQLGT +S Sbjct: 1552 AELAWRIHDVEEAYAKARAAYAAGPADAARAAELAEVRWLIEELRVSLFAQQLGTDGTVS 1611 Query: 1288 DKRILQAME 1296 +KRI + + Sbjct: 1612 EKRIRKTLA 1620 >UniRef50_A3M3Z2 ATP-dependent helicase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M3Z2_ACIBT Length = 939 Score = 1092 bits (2826), Expect = 0.0, Method: Composition-based stats. Identities = 450/954 (47%), Positives = 624/954 (65%), Gaps = 40/954 (4%) Query: 99 AGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKV 158 AGETGSGKTTQLP+I M GRG+ G+IGHTQPRRLAAR+V+ RIAEE+ + G IG+K+ Sbjct: 2 AGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARSVSQRIAEEVGEKLGESIGFKI 61 Query: 159 RFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP 218 RF++ S +++V+LMTDGILLAE+ DR L +YDTIIIDEAHERSLNIDF++GYLK+LLP Sbjct: 62 RFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIIDEAHERSLNIDFIMGYLKQLLP 121 Query: 219 RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEA---------DD 269 +RPDLK+I+TSAT+D RFS +FNNAPI EV GR+YPVEVRYRPI E DD Sbjct: 122 KRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVEVRYRPISEMNIGGSDDDEFDD 181 Query: 270 TERDQLQAIFDAVDE--LSQESHG-----DILIFMSGEREIRDTADALNKLNLRHTEILP 322 E + +A+ AV+E E G DILIF S E+EIR+ + L K RHTEILP Sbjct: 182 FEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQEIRELQETLQKYGPRHTEILP 241 Query: 323 LYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381 LYARL+ SEQ ++F RRI++ATNVAET+LTVP I+YVID G ARISRY+YR++VQ Sbjct: 242 LYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNIRYVIDSGFARISRYNYRSRVQ 301 Query: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMT 441 RLPIE ISQA+ANQRKGRCGRV+ G+CIRLYSE+DFLSRPEFT+PEI RTNLASVILQM Sbjct: 302 RLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSRPEFTEPEIKRTNLASVILQMQ 361 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 +LGLG++ F F+E PD R + DG +LL ELGA+ + +LT +G+ ++++P+DPR Sbjct: 362 SLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN----ELTKVGQMMARMPIDPR 417 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL 561 LARM++ G ++E +++ SAL++QD RERP DKQ +D+KH F + +SDFL ++ L Sbjct: 418 LARMIVGGAHFGVLKEILVVVSALAVQDARERPADKQMQADQKHALFKEADSDFLFYLKL 477 Query: 562 WNYLGEQQKA-LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 W+ L + +A +S N R+ + +L++LR+REW+ + QL ++ + L + N +PA Y Sbjct: 478 WDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVELAEGLKLSFNEKPANYE 537 Query: 621 EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLW 680 +H ALLTGLLS I K ++ + R + +FP S L K WVM E+VETS+++ Sbjct: 538 NLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKTNTAWVMAFEMVETSQVY 597 Query: 681 GRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI 740 R A+IDPEW+ A+ L+K Y EPHW + G V A +++++GL I R VN+ ++ Sbjct: 598 LRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQISLFGLIIEPKRLVNFEKV 657 Query: 741 DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYD 800 D E+F+R AL G+ T F + NL EVE +E K RRRD++VD+ET+++FY Sbjct: 658 DQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFYA 717 Query: 801 QRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLR 860 +I ++ S R F+ W V + P L E L ++ + +P+ H G L+L Sbjct: 718 SKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDAL--WLNDRPTTQQFPDHLHNGQLRLA 775 Query: 861 LSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVP 920 +Y+F+P D DG TV IP+ L QV+E+ + W IPG R +L+ AL+K+LPK RRN VP Sbjct: 776 TTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEALLKALPKDKRRNLVP 835 Query: 921 APNYAEAFLGRVKP--LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDD 978 P+ A + + L + L LR G + +D+ ++++ +L +V+D+ Sbjct: 836 IPDTARKLMQGIDAVHLRQHIFSYLAFALR---GEQITEKDFSFERIDPYLVPFIKVIDE 892 Query: 979 KNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQK 1032 K K + +GR L +LK + + + F PE+ K Sbjct: 893 KGKLIAKGRDLAELKARCRVETHRPVKQQKG-----------EFKTFPETLPLK 935 >UniRef50_C1RH11 ATP-dependent helicase HrpA (Fragment) n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RH11_9CELL Length = 1120 Score = 1070 bits (2769), Expect = 0.0, Method: Composition-based stats. Identities = 526/973 (54%), Positives = 668/973 (68%), Gaps = 97/973 (9%) Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 P I YP+ LPVS ++Q+I +AIRDHQVV+VAGETGSGKTTQLPKI +ELGRG G IGH Sbjct: 136 LPAIVYPEQLPVSARRQEIADAIRDHQVVVVAGETGSGKTTQLPKIALELGRGRAGQIGH 195 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AARTVA RIA+EL GG +GY+VRF+D SD+T+VK+MTDGILLA+IQ+D + Sbjct: 196 TQPRRIAARTVAERIADELGVPLGGVVGYQVRFTDESSDSTLVKVMTDGILLAQIQRDPM 255 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----- 242 L YDT+IIDEAHERSLNIDF+LGYL LLP+RPDLK++ITSATID +RF+RHF Sbjct: 256 LRMYDTLIIDEAHERSLNIDFILGYLTRLLPQRPDLKLVITSATIDSDRFARHFGSPATA 315 Query: 243 ------NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIF 296 AP++EVSGRTYPVE+RY+P + D +RD + I +AVDEL GD+L+F Sbjct: 316 AAEDRTPAPVVEVSGRTYPVEIRYQP-LSPDDGPDRDLVTGITEAVDELMAAGPGDVLVF 374 Query: 297 MSGEREIRDTADALNK---------LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 +SGEREIRD DAL + EI+PLYARLS +EQ RVF++H+ RR++LA Sbjct: 375 LSGEREIRDAEDALRGSLGPRVTDPRHPDGVEIVPLYARLSAAEQRRVFEAHTTRRVILA 434 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPG++YV+DPGTARISRYS TKVQRLPIEP+SQASANQR GR GRV+ GI Sbjct: 435 TNVAETSLTVPGVRYVVDPGTARISRYSKATKVQRLPIEPVSQASANQRSGRSGRVAPGI 494 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEAPDKRNIQ 463 IRLYSE+DF SRPE+T+PEILRT+LASVILQM A+G+ ++ FPFV+ PD R ++ Sbjct: 495 AIRLYSEEDFESRPEYTEPEILRTSLASVILQMIAVGVVTSPDEVVDFPFVDPPDVRAVR 554 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 DGV LL EL A+ +LT GR L+QLP+DPRLARMV+EA + G RE ++I + Sbjct: 555 DGVALLTELHALEVQG--GRTRLTETGRALAQLPIDPRLARMVVEAGRRGVAREVLVIAA 612 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 ALSIQDPRERP + ++ +D HRRF D SD L ++NLW YL ++Q+ LS +AFRRLC+ Sbjct: 613 ALSIQDPRERPAESRETADALHRRFADPSSDLLTYLNLWTYLRDRQRELSGSAFRRLCKA 672 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA-------------------------- 617 ++L++LRVREWQD+ TQLRQ+ K+LG P Sbjct: 673 EHLHFLRVREWQDVVTQLRQMAKDLGFEAKGAPTPASDEVPAAAGHGRDGRRDGGRHTPT 732 Query: 618 ----------------------EYREIHIALLTGLLSHIGM------------------- 636 + IH ALL GLLS IGM Sbjct: 733 GAPTQDAGSVERPDALQTRWTWDGDAIHRALLPGLLSQIGMQVVTDVAAGAPAKGRDGKP 792 Query: 637 KDAD---KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 + D + EY GAR ARF+IFPGSGL ++PP WVM AELVETSRLW R A++DP WVE Sbjct: 793 RRPDSRARNEYLGARGARFAIFPGSGLSRRPPSWVMAAELVETSRLWARDVAKVDPAWVE 852 Query: 694 PVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 A HL+KRTY++P W QGA M EKV +YG+P+VA R+V ++IDP RELF+RHA Sbjct: 853 EAAAHLVKRTYADPAWSTRQGAAMVNEKVLLYGVPVVAQRRVLLARIDPEHARELFVRHA 912 Query: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHF 813 LV+G+W T H FF EN +L AE E L ++RRRD++VDD+ LF+FYD R+ +V+SARHF Sbjct: 913 LVQGEWTTHHTFFHENRRLLAEAEALAARARRRDLVVDDDALFDFYDARVPPEVVSARHF 972 Query: 814 DSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADG 873 D WWK R PDLL+F + +L+ + A +I + +P+ W QG L L+YQFEPG +ADG Sbjct: 973 DRWWKDARRADPDLLSFTRELLVGDDAAEIDEGAFPSRWPQGELSFPLTYQFEPGTEADG 1032 Query: 874 VTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVK 933 VTVH+P+ L +V GF+W +PG+R EL+ A I++LPKPVR VPAP+ A A + Sbjct: 1033 VTVHVPISQLPRVRPEGFDWMVPGMRAELLTATIRALPKPVRVQLVPAPDVARAVDAWLT 1092 Query: 934 PLELPLLDSLERE 946 +D++ Sbjct: 1093 EHAASWVDTVRAA 1105 >UniRef50_C0VY42 HrpA family ATP-dependent helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VY42_9ACTO Length = 1577 Score = 1045 bits (2704), Expect = 0.0, Method: Composition-based stats. Identities = 493/1028 (47%), Positives = 642/1028 (62%), Gaps = 131/1028 (12%) Query: 31 LHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAI 90 + ++ + + ++ + +E + + R + P I +P+NLPVS +K +I AI Sbjct: 1 MAEKQQTRTFNKKRRHYTNRPREFKFSKEVLAARATSLPVIDFPENLPVSARKDEIANAI 60 Query: 91 RDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEP 150 ++HQVVIV+GETGSGKTTQLPKIC++LGRGI LIGHTQPRRLAAR VA RIAEEL + Sbjct: 61 KNHQVVIVSGETGSGKTTQLPKICLQLGRGIAKLIGHTQPRRLAARAVATRIAEELNSTV 120 Query: 151 GGC--IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 GG +GY+VRF+D VS T+VKLMTDGILLAEIQ D LL +YDT+IIDEAHERSLNIDF Sbjct: 121 GGEGIVGYQVRFTDQVSSATLVKLMTDGILLAEIQNDPLLNRYDTLIIDEAHERSLNIDF 180 Query: 209 LLGYLKELLPRRPDLKIIITSATIDPERFSRHF-----NNAPIIEVSGRTYPVEVRYRPI 263 LLG++K+LLP+RPDLK+IITSATID RF++HF N AP+I VSGRTYPVEVRYRP+ Sbjct: 181 LLGFIKQLLPKRPDLKVIITSATIDSARFAQHFADAHGNPAPVITVSGRTYPVEVRYRPL 240 Query: 264 VEEADDT--------------------------------ERDQLQAIFDAVDELSQESHG 291 + D L AI A DEL E G Sbjct: 241 SPAEPPAADTAETDEESFKNLVLEDPDADLALNGYGYGQDIDYLSAICAATDELCAEPLG 300 Query: 292 -------DILIFMSGEREIRDTADALNKL---------------NLRHTEILPLYARLSN 329 DILIF+ GER+IRDT +AL L E++PLY+RLS Sbjct: 301 NAENPDRDILIFLPGERDIRDTTNALRDHLGTRFLKAGEASGKSPLDAIEVVPLYSRLSA 360 Query: 330 SEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPIS 389 +EQ +F H RRIVLATNVAETSLTVPGIKYVIDPG ARISRYS RTKVQRLPIEPIS Sbjct: 361 AEQQLIFAPHPRRRIVLATNVAETSLTVPGIKYVIDPGLARISRYSNRTKVQRLPIEPIS 420 Query: 390 QASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIA 449 QASANQR GRCGRVS+G+ IRLYS+ DF +RP FT+PEILRT+LASVILQM ALGLG + Sbjct: 421 QASANQRSGRCGRVSDGVAIRLYSQKDFQNRPRFTEPEILRTSLASVILQMAALGLGLVE 480 Query: 450 AFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA 509 FPF++AP ++I+DGV LL E+GAIT +Q +LT +GR L++LP+DPRL RM+LEA Sbjct: 481 KFPFLDAPAPKSIKDGVALLAEIGAITVSKQE--LRLTKIGRDLAKLPIDPRLGRMLLEA 538 Query: 510 QKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQ 569 K GC E ++I +ALS+QD RERP QQ +D H RF D SDF+ ++NLW YL Sbjct: 539 DKLGCSSEVLVIVAALSMQDVRERPEAYQQDADAAHARFLDPTSDFITYLNLWRYLRVCD 598 Query: 570 KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN---------------- 613 + LS++A RRLC+ ++L+YLR REW+D+ +QL + K L + + Sbjct: 599 RELSNSALRRLCKKEFLHYLRFREWEDVVSQLVDLAKPLRLSLEPLSLPAKSDLARARQM 658 Query: 614 -----------------SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + IH ALL GLLS++G + K +Y GAR +RF+++P Sbjct: 659 SGAQDGTVQAVLDFTEGTSSRNADSIHQALLVGLLSNLGAWNQQKSDYEGARGSRFTVWP 718 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 GSGL +K WVM AELVETSRL+ R ARI PEWVE +A L+KR YSEP W ++GA Sbjct: 719 GSGLARKHYDWVMAAELVETSRLFARTVARIKPEWVERIAPDLVKRVYSEPFWAASRGAA 778 Query: 717 MATEKVTVYGLPIVAARKVNYS------QIDP-------------------------ALC 745 + EK +YGL + A R+V ++D L Sbjct: 779 LVREKTMLYGLTLTADREVLLGGLPADIKLDRCASAGFTIGARAGASADGLQGMTPAELA 838 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 R++FIRHALVE W+ +AF R+N +L + EH+ R ++ D+ +F F+D+R+ Sbjct: 839 RDMFIRHALVENQWRADYAFIRDNQRLLDSIRADEHRFRTGG-VISDDAIFAFFDERVPA 897 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 V+SA HFD WW+ + +L + L+ S D+P W QG +L L Y+F Sbjct: 898 SVVSATHFDGWWR--RQRNKRVLLLSREALLPGEFSS-SAADFPAVWRQGEFELPLHYEF 954 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 PG++ DGV+V IPL LL +V++ GF W +PG+ EL+ +I++LPK +R+ VPAP+ A Sbjct: 955 NPGSERDGVSVRIPLALLPRVQDQGFAWLVPGMLEELLTGVIRALPKQLRQQLVPAPDVA 1014 Query: 926 EAFLGRVK 933 ++ Sbjct: 1015 SKCAAWLR 1022 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 92/436 (21%), Positives = 157/436 (36%), Gaps = 79/436 (18%) Query: 939 LLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKG 998 S + + + GV V E W ++P HL+ TF VVD+K K+L + L L+ L Sbjct: 1141 FFASFTQAAKVLKGVDVPNELWDEIELPPHLRFTFVVVDEKGKELLASKELAWLQKELAQ 1200 Query: 999 KVQETLSAVADDGI---------------------------------------------- 1012 + Q + + + Sbjct: 1201 RSQTAVRSAMRSALTSALEATEGTSSPKGRGKDRPRKKNLPGVTAPNVGTAANAPTPKNA 1260 Query: 1013 -------EQSGLHIWS-----FGQLPESYE-QKRGNYKVKAWPAL-VDERDS-------- 1050 E +GL W LP+ E V+A+PAL D +S Sbjct: 1261 AQTQLFKETTGLTDWPALGTADDALPKDIEATTAQGLMVRAFPALHTDTAESYANNKGTS 1320 Query: 1051 ----VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVL 1106 K++ E A GL +L+L + + K L L +PY Sbjct: 1321 LHFSAGTKIYATLHEADAAHQAGLVQLVLAKTALTQTRITTRWSGKESLLLAASPYANTT 1380 Query: 1107 ELIDDCISCGVDKLI---DANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAV 1163 L+ + V+ L+ + + + F L V+ L D V ++ K + L A Sbjct: 1381 ALVAAAQTAAVNALLNDYAMHPALIRSRSSFNELCAWVKPRLEDKVYELLKYLINALAAS 1440 Query: 1164 FNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKL 1223 ++ ++ +M + +KA L+ GF T + R+++A E R++K Sbjct: 1441 ADLETTVRAHGTQSMLQVNAAVKAHAQSLLNDGFFTQIPPLWIPHVARFIKADELRVKKA 1500 Query: 1224 ---AVDPHRDRAQMLKVENVQ-QAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ 1279 A +D + ++ Q+ ++E +W++EELRVSYFAQ+ Sbjct: 1501 AQSAQALAKDANLQRDLAELEHTLLQRQAGTGLNDAARLTQLREAQWLLEELRVSYFAQE 1560 Query: 1280 LGTPYPISDKRILQAM 1295 LGT +S KR+ + Sbjct: 1561 LGTSQKVSAKRLWNLL 1576 >UniRef50_D0W5V2 ATP-dependent helicase HrpA n=3 Tax=Neisseria RepID=D0W5V2_NEICI Length = 1417 Score = 966 bits (2499), Expect = 0.0, Method: Composition-based stats. Identities = 445/844 (52%), Positives = 582/844 (68%), Gaps = 60/844 (7%) Query: 12 LQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI 71 + + +DR K ++ ++ ++ L R AA P+ Sbjct: 1 MFPDFSQTLSKDRHFLQSAFKNPNKY-------GGLSKVEEKYRKSHEIFLKRLAALPKP 53 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 + + LPV +K ++I +AI ++QV I+ GETGSGKTTQLPKIC+ELGRG GLIGHTQPR Sbjct: 54 EFDNTLPVHEKLEEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPR 113 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 RLAAR+VA RIAEELK+E G +GYKVRF+DH S + VKLMTDGILLAE Q DR L Y Sbjct: 114 RLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAY 173 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 DTIIIDEAHERSLNIDFLLGYLK+LLPRRPDLK+IITSATID ERFS+HFN+AP++EVSG Sbjct: 174 DTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNSAPVLEVSG 233 Query: 252 RTYPVEVRYRPIVE-EADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADAL 310 RTYPVE+ YRP+ + DD E + I DA DEL+ GDIL+F+ GEREIR+ A+AL Sbjct: 234 RTYPVEILYRPLTSKDEDDAEVELTDVIVDAADELAGHGEGDILVFLPGEREIREAAEAL 293 Query: 311 NKLN-LRHTEILPLYARLSNSEQNRVFQSHS-GRRIVLATNVAETSLTVPGIKYVIDPGT 368 K R+ EILPL+ARLS++EQ+++F RRIVLATNVAETSLTVPGIKYVID G Sbjct: 294 RKSTLRRNDEILPLFARLSHAEQHKIFHPTGAKRRIVLATNVAETSLTVPGIKYVIDTGL 353 Query: 369 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEI 428 AR+ RYS R KV++L +E ISQA+A QR GRCGRVS G+CIRL+SE+DF +RPEFTDPEI Sbjct: 354 ARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNNRPEFTDPEI 413 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 +R+NLA+VIL+M +L LGD+AAFPF+E PD R I DG ++L ELGA+ LT Sbjct: 414 VRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDGFQVLLELGAVNEHNG-----LTR 468 Query: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548 LG Q++ LP+DP++AR++L A+KH C+ E ++I SALSIQDPRERP++ + A+ + H RF Sbjct: 469 LGEQMAHLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERF 528 Query: 549 HDKESDFLAFVNLWNYLGEQQ-KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 DK+SDFLA++N+W+ ++ K LS+ + CR +L++LR+REW++++ QL Q E Sbjct: 529 TDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIE 588 Query: 608 LGIPVNS--------------------------------------------EPAEYREIH 623 +G+ + A Y +IH Sbjct: 589 MGLTTKEATFRRPPTQEQLKPSESQGDQDLSAKLKQKQLDKKQHRAQIHAAKEAGYEQIH 648 Query: 624 IALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRI 683 ALLTGL++++GMK D +YTGAR +RF +FP S LFK PKWVM AEL+ET+RL+ R Sbjct: 649 RALLTGLITNVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELMETTRLYARD 708 Query: 684 AARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPA 743 A I PEW+E A HL++ Y EPHWE+ +G V+A+E+VT+YGL ++ R V+Y ++ P Sbjct: 709 VAVIQPEWIEQEAPHLVRYHYYEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPE 768 Query: 744 LCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRI 803 RE+FIR ALV + + AFF N KL E+ ELEHKSR++D+LVDDE LF FY++R+ Sbjct: 769 EAREIFIRGALVAQESNLQTAFFAHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERL 828 Query: 804 SHDV 807 V Sbjct: 829 PELV 832 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 141/514 (27%), Positives = 245/514 (47%), Gaps = 16/514 (3%) Query: 792 DETLFEFYDQRI-SHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPN 850 + F R+ + R F++W K R+ P LL + L++ A I++ +P Sbjct: 901 PKKQPAFQKGRLKPLPLADIRTFEAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFPK 960 Query: 851 FWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSL 910 FW + K +LSY+FEP DGVT+ +PL +LN++ EW +PG+ RE + LIK+L Sbjct: 961 FWQTADGKFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKAL 1020 Query: 911 PKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG-----VTVDREDWHWDQV 965 PK +RR VP P++ FL + ++ L + + G +D++ W ++ Sbjct: 1021 PKQIRRICVPVPDFITKFLESNPDRQAAIIPQLAHFIAKSAGDMRILEQIDQDAWAAQEL 1080 Query: 966 PDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQL 1025 P+H + R++DD ++L GR L +L+ L T E+ + W G L Sbjct: 1081 PEHCYLNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTF-RDNTQEFERDNVTAWDIGTL 1139 Query: 1026 PESYEQKRGNYKVKAWPALVDERDS-VAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKY 1084 PES + RG ++ + L E+D +A++LFD +QA G+ L+ L + +K Sbjct: 1140 PESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSAAAEQAHRLGVIELMKLQLKEQVKD 1199 Query: 1085 LHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAE 1144 L++ + + + + L DD D+ E+ F ++ R+ Sbjct: 1200 LNKGIQGFTQAAMLLK-HINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSR 1258 Query: 1145 LNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK 1204 L +++ +++ + A +N +L + +T L L GF T + Sbjct: 1259 LPAVKEALSRYLQETVAAYAELNGKL-SKHPLTHLLRLRLQTLLAA-----GFATRTPWA 1312 Query: 1205 RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPAR-REDEDVKE 1263 + YL+A+ RLEK + + RD A+ ++ ++Q WQ+ + L + + Sbjct: 1313 QWPRLPIYLKAMTLRLEKYSSNLARDDAREADIQELEQMWQEKTDSLIKQGLPISDSLAG 1372 Query: 1264 IRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQ 1297 +WMIEELRVS FAQ+L TPYP+S KR+++ E+ Sbjct: 1373 FKWMIEELRVSLFAQELKTPYPVSVKRLMKVWER 1406 >UniRef50_B4CU07 Helicase-associated domain protein n=2 Tax=Verrucomicrobia RepID=B4CU07_9BACT Length = 1021 Score = 949 bits (2455), Expect = 0.0, Method: Composition-based stats. Identities = 353/1043 (33%), Positives = 536/1043 (51%), Gaps = 72/1043 (6%) Query: 297 MSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLT 356 M ER+IRDT + L E++ L+ R+ +EQ R+F RR+++ATN+AETSLT Sbjct: 1 MPTERDIRDTRELLEGSLGSSFEVISLFGRMPAAEQQRIFAPSPRRRVIVATNIAETSLT 60 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 +P I+YV+D G +R+SRY+ RT+ +RLP+E +SQ+SANQR GR GRV +G CIRLY+EDD Sbjct: 61 LPRIRYVVDAGLSRMSRYNPRTRTKRLPVEDVSQSSANQRAGRAGRVQDGTCIRLYAEDD 120 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 F +RP FT PEI R NLA VIL+M A LGDI FPF+ P I+ G +LL ELGA+ Sbjct: 121 FSARPRFTQPEIQRANLAEVILRMKAFRLGDIETFPFINPPVSAAIRAGYQLLHELGALN 180 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + LT LGR+L++LP+DP L RM+L+A++ + E +II + LS+ DPRERP + Sbjct: 181 DSNE-----LTSLGRELARLPIDPTLGRMLLQAREEKVLPEMLIIAAGLSVPDPRERPEE 235 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 ++A+ H+ F D +SDFL+ +N+W + + S NA RR C+ +L+ R+REW+D Sbjct: 236 AKEAAATAHKAFADPDSDFLSLLNIWRAAPDAEGRGSGNALRRFCKASFLSLSRMREWRD 295 Query: 597 IYTQLRQVVKE----LGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 I+ QL + E G E Y IH A+L GLL HI + ++ Y + Sbjct: 296 IHRQLADAMDEDAPARGGNRQPEENAYPPIHRAILAGLLGHIAFRQ-ERNVYKASGERLV 354 Query: 653 SIFPGSGLFK------------------KPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 ++FPGS L++ + P+W++ E+VETS L+ R+ A I+PEW+ Sbjct: 355 TLFPGSNLYERRDKPKKNAAPAKPADKSRQPQWIVAGEIVETSLLFARMVAGINPEWIID 414 Query: 695 VAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHAL 754 + HL Y+EP+W G V+ E+V + GL I R V++ +I+P ELFIR AL Sbjct: 415 LGGHLCTFRYTEPYWSAKAGRVLVLERVLISGLEI-TRRHVDFGRIEPEKATELFIRGAL 473 Query: 755 VEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFD 814 V + + H FF EN ++R ++E + R R DE +++FY +RI +V S + Sbjct: 474 VAEEAKLPHRFFSENHQVREKIETALTRVRSRRAHDLDEAMYQFYAERI-TNVSSVHDLN 532 Query: 815 SWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV 874 + + PD L ++ L+ E + +P+ GN L ++Y + PG DADGV Sbjct: 533 RFVRDRIAREPDFLCATETDLVGEDDTTYDRQLFPDQVSLGNTALPVTYAYTPGQDADGV 592 Query: 875 TVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP 934 TV +PLP+ +Q+ +W +PGLR E + L+++LPK VR+ +P + +P Sbjct: 593 TVRVPLPVASQLTTGQIQWMVPGLREEQIGVLLRALPKTVRKTLMPLEPKVREIVAEFQP 652 Query: 935 LELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKD 994 L +L L R V V EDW +P HL+ V+D NK + GR L+ ++ Sbjct: 653 GRGDFLTALADFLSRKYRVMVRAEDWPPQSLPTHLQPRVEVIDRGNKTVAAGRDLEAIQA 712 Query: 995 ALKGK-VQETLSAVADDGIEQSGLHIWSFGQLPESYEQ-KRGNYKVKAWPALVDERDSVA 1052 ++ V+ A E+ GL WS G LPES + G + A+P L V Sbjct: 713 QVQKHDVRTDAWDKAVRKWERRGLTTWSIGDLPESVVVEEVGGAPLLAYPGLALREGEVD 772 Query: 1053 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAK--------------LGLY 1098 ++LF E ++A G+RRL L + + + ++L AK L Sbjct: 773 VRLFRQREEAEKASRQGVRRLAELILARDLTRVWKELAGLAKHLPTHAPRQAANFHSALQ 832 Query: 1099 --------FNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVV 1150 P+ L +D ++ TE F A+ E R EL Sbjct: 833 QMSAKLQPAAPFVTPEALQKSAYQHLLDHVLQLTPVFPLTEARFLAMAETARRELPGLTY 892 Query: 1151 DIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTL 1210 I +V Q+ + + + LV F+ +L Sbjct: 893 QIGDRVRQLFDLREKL---------LASPKRYPGFDQDLQRLVPGDFLARTPHAQLPHLH 943 Query: 1211 RYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEE 1270 RYL+A++ R E+ ++P +D + ++E W+ + + + RWM+EE Sbjct: 944 RYLRAMQVRAERAVLNPAKDAEKAKQLEPF-ARWESRV--------PEAQQETFRWMLEE 994 Query: 1271 LRVSYFAQQLGTPYPISDKRILQ 1293 RVS FAQ+LGT P S +R+ Sbjct: 995 FRVSLFAQELGTAQPASAQRLKA 1017 >UniRef50_Q09530 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 n=44 Tax=Eukaryota RepID=MOG5_CAEEL Length = 1200 Score = 921 bits (2381), Expect = 0.0, Method: Composition-based stats. Identities = 233/679 (34%), Positives = 373/679 (54%), Gaps = 27/679 (3%) Query: 33 GVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRD 92 + K+ + + E K + R + ++LP+ K++++EA+ D Sbjct: 496 SADESKDRNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMID 555 Query: 93 HQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGG 152 +Q+++V GETGSGKTTQ+ + +E G G +G IG TQPRR+AA +VA R+AEE + G Sbjct: 556 NQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGT 615 Query: 153 CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGY 212 +GY +RF D S +T++K MTDG+LL E D L Y I++DEAHER+++ D L G Sbjct: 616 DVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGL 675 Query: 213 LKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTER 272 LK +RP+LK+IITSAT+D +FS +F API + GRT+PVE+ Y + E Sbjct: 676 LKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY------TREPES 729 Query: 273 DQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN------LRHTEILPLYA 325 D L+A V ++ E GD+L+F++G+ EI + + L + + ILP+Y Sbjct: 730 DYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYG 789 Query: 326 RLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383 L + Q R+F R++V+ATN+AETSLT+ GI YV+DPG + Y+ ++ + L Sbjct: 790 ALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSL 849 Query: 384 PIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTA 442 + PISQA+A QR GR GR G C RLY+E F PEI RTNLAS +LQ+ A Sbjct: 850 VVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKA 909 Query: 443 LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502 +G+ ++ F F++AP ++ + L L A+ D LT LGR++++ P++P L Sbjct: 910 MGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL-----LTKLGRRMAEFPLEPSL 964 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562 +++++ + GC E + I + L++Q+ RP +KQ +D+K +FH E D L + ++ Sbjct: 965 SKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVY 1024 Query: 563 NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREI 622 N + + + C +++ ++ QDI QL ++ + + S + + Sbjct: 1025 NSW------KNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRV 1078 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 A+ +G + +D + T I P S F++ P+WV+ ELV T++ + R Sbjct: 1079 QKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMR 1138 Query: 683 IAARIDPEWVEPVAQHLIK 701 IDP+W+ A K Sbjct: 1139 EVTAIDPKWLVEFAPSFFK 1157 >UniRef50_Q6BRT9 DEHA2D13882p n=8 Tax=Saccharomycetales RepID=Q6BRT9_DEBHA Length = 1147 Score = 913 bits (2360), Expect = 0.0, Method: Composition-based stats. Identities = 232/707 (32%), Positives = 376/707 (53%), Gaps = 33/707 (4%) Query: 13 QQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK--VLLREAARPE 70 Q R + +D R + + + + +++ K + + Sbjct: 414 QARQEKAKSKDSHDPLNRANNAQNTEIATTNEKTSNFISEWKKSQMDKNISYGKRTSLSI 473 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR----GIKGLIG 126 ++LP+ + D+++A+R++Q +++ GETGSGKTTQ+ + E G + +IG Sbjct: 474 KEQRESLPIFPMRADLIKAVRENQFLVIVGETGSGKTTQIVQYLAEESLDKVEGEQKIIG 533 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AA +VA R+AEE + G +GY +RF D S +T +K MTDG+L E D Sbjct: 534 CTQPRRVAAVSVAKRVAEEYGCKVGEDVGYTIRFEDKTSKDTRMKYMTDGMLQREALNDP 593 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L+ +Y I++DEAHER++ D L LK+ + P+LKIIITSAT+D +FS +FN+ PI Sbjct: 594 LMSRYSVIMLDEAHERTIATDVLFTLLKKAVANNPNLKIIITSATLDANKFSNYFNSCPI 653 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRD 305 + + GRTYPV++ Y + E D L + D+V ++ E GDIL+F++G+ EI Sbjct: 654 VRIPGRTYPVDILY------TREPEMDYLSSALDSVIQIHISEPEGDILVFLTGQEEIDT 707 Query: 306 TADALNKLN------LRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTV 357 + +AL + + ILP+Y+ L + Q+++F+ R+++LATN+AETS+T+ Sbjct: 708 SCEALYERMKILGDTVPELIILPVYSALPSEMQSKIFEATPPGSRKVILATNIAETSITI 767 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 GI YV+DPG +I+ Y + + L I PISQA ANQR GR GR G C RLY+E F Sbjct: 768 DGIYYVVDPGFVKINAYDSKLGMDSLTISPISQAQANQRSGRAGRTGPGKCYRLYTESAF 827 Query: 418 L-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 T PEI R NL+ IL + A+G+ D+ F F++ P + + ++ L L A+ Sbjct: 828 KTEMLPNTVPEIQRQNLSHTILMLKAMGINDLLNFEFMDPPPTNTMMNALQDLYTLSALD 887 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 D LT LGR++++ P++P LA+ ++ + GC E + I + LS+Q RP D Sbjct: 888 DDGY-----LTKLGRKMAEFPMEPALAKTLIISVDFGCSDEILTIVAMLSVQTVFYRPKD 942 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 KQ+ +D+K RFH + D L +N++ + ++ C +Y+ ++ Q+ Sbjct: 943 KQKQADQKKYRFHHQYGDHLTLLNVYRSWSL------NGNNKQWCVENYIQDRSMKRAQE 996 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + QL ++ + P+ S + AL G H +D + T + P Sbjct: 997 VRKQLVLIMSKYRHPIISCGPNIDRVRKALCAGFFKHSSKRDPQEGYKTLVEQTPVHLHP 1056 Query: 657 GSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 S LF K P +V+ L+ TS+ + ID +W+ +A K+T Sbjct: 1057 SSALFGKSPDYVIYHTLLLTSKEYMHCVTVIDAKWLLELAPGFFKKT 1103 >UniRef50_Q7PT33 AGAP007212-PA n=4 Tax=cellular organisms RepID=Q7PT33_ANOGA Length = 1288 Score = 911 bits (2355), Expect = 0.0, Method: Composition-based stats. Identities = 230/686 (33%), Positives = 366/686 (53%), Gaps = 27/686 (3%) Query: 30 RLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 + E K I R+ + +LP+ + + D+++A Sbjct: 585 ERTAASNTRGVGMSTQDVPEWKKAIIGGKKSSFGRKTDMSLVEQRQSLPIYKLRDDLIKA 644 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 + D+Q++IV GETGSGKTTQ+ + E G +G IG TQPRR+AA +VA R+AEE Sbjct: 645 VTDNQILIVIGETGSGKTTQITQYLAESGFIARGKIGCTQPRRVAAMSVAKRVAEEYGCR 704 Query: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY +RF D S T++K MTDG+LL E D L Y I++DEAHER+++ D L Sbjct: 705 LGQEVGYTIRFEDCTSQETVIKYMTDGMLLRECLVDFDLKSYSVIMLDEAHERTIHTDVL 764 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 G LK+ + +RP+LK+I+TSAT+D +FS++F API + GRT+PVE+ Y + Sbjct: 765 FGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEILY------TKE 818 Query: 270 TERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN------LRHTEILP 322 E D L A V ++ +E GD+L+F++G+ EI + L + + ILP Sbjct: 819 PETDYLDASLITVMQIHLREPPGDVLLFLTGQEEIDTACEILYERMKSLGPDVPELIILP 878 Query: 323 LYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKV 380 +Y+ L + Q R+F R++V+ATN+AETSLT+ GI YV+DPG + Y+ +T + Sbjct: 879 VYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGM 938 Query: 381 QRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQ 439 L + PISQA+A QR GR GR G RLY+E + PEI RTNLA+ +LQ Sbjct: 939 DSLVVTPISQAAAKQRAGRAGRTGPGKAYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQ 998 Query: 440 MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD 499 + +G+ D+ F F++AP ++ + L L A+ + LT LGR++++ P++ Sbjct: 999 LKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDNEGL-----LTRLGRRMAEFPLE 1053 Query: 500 PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV 559 P L+++++ + C E + I S LS+Q+ RP DKQ +D+K +F+ E D L + Sbjct: 1054 PNLSKLLIMSVALQCSDEVLTIVSMLSVQNVFYRPKDKQALADQKKAKFNQIEGDHLTLL 1113 Query: 560 NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY 619 ++N ++ C +++ ++ QD+ QL ++ + V S Sbjct: 1114 AVYNSW------KNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNT 1167 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL 679 + A+ +G + KD + T + I P S LF + P+WV+ ELV+T++ Sbjct: 1168 VRVQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKE 1227 Query: 680 WGRIAARIDPEWVEPVAQHLIKRTYS 705 + R IDP+W+ A + + Sbjct: 1228 YMREVTTIDPKWLVEFAPAFFRFSDP 1253 >UniRef50_Q14562 ATP-dependent RNA helicase DHX8 n=78 Tax=Eukaryota RepID=DHX8_HUMAN Length = 1220 Score = 911 bits (2354), Expect = 0.0, Method: Composition-based stats. Identities = 237/672 (35%), Positives = 363/672 (54%), Gaps = 27/672 (4%) Query: 44 QAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETG 103 E K ++ + ++LP+ + K+ +++A+ D+Q++IV GETG Sbjct: 532 PNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 591 Query: 104 SGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDH 163 SGKTTQ+ + E G +G IG TQPRR+AA +VA R++EE G +GY +RF D Sbjct: 592 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 651 Query: 164 VSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDL 223 S T++K MTDG+LL E D L QY I++DEAHER+++ D L G LK+ + +R D+ Sbjct: 652 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 711 Query: 224 KIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVD 283 K+I+TSAT+D +FS++F API + GRTYPVE+ Y + E D L A V Sbjct: 712 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY------TKEPETDYLDASLITVM 765 Query: 284 ELS-QESHGDILIFMSGEREIRDTADALNKLN------LRHTEILPLYARLSNSEQNRVF 336 ++ E GDIL+F++G+ EI + L + + ILP+Y+ L + Q R+F Sbjct: 766 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 825 Query: 337 --QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 R++V+ATN+AETSLT+ GI YV+DPG + Y+ +T + +L + PISQA A Sbjct: 826 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 885 Query: 395 QRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPF 453 QR GR GR G C RLY+E + PEI RTNLAS +L + A+G+ D+ +F F Sbjct: 886 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 945 Query: 454 VEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHG 513 ++AP + + L LGA+ + LT LGR++++ P++P L +M++ + G Sbjct: 946 MDAPPMETLITAMEQLYTLGALDDEGL-----LTRLGRRMAEFPLEPMLCKMLIMSVHLG 1000 Query: 514 CVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 C E + I S LS+Q+ RP DKQ +D+K +FH E D L + ++N + Sbjct: 1001 CSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW------KN 1054 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSH 633 + C +++ +R QDI Q+ ++ + V S + A+ +G + Sbjct: 1055 NKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRN 1114 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 KD + T I P S LF + P+WV+ ELV T++ + R IDP W+ Sbjct: 1115 AAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLV 1174 Query: 694 PVAQHLIKRTYS 705 A K + Sbjct: 1175 EFAPAFFKVSDP 1186 >UniRef50_C0NP73 ATP-dependent RNA helicase DHX8 n=10 Tax=Dikarya RepID=C0NP73_AJECG Length = 1266 Score = 906 bits (2342), Expect = 0.0, Method: Composition-based stats. Identities = 239/710 (33%), Positives = 373/710 (52%), Gaps = 33/710 (4%) Query: 3 EQQKLTFTALQQRLDSLMLR-DRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 ++ L + M+ + +F+ L + K D K + Q+ + Sbjct: 532 AAEQAAGVDLNAQWHDPMVAPEERKFAADLRNAQVTKTTDTLPEW-----KRVTQSKDQS 586 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 + ++LPV + ++ +LEA+ ++Q++IV G+TGSGKTTQL + E G Sbjct: 587 YGKRTNMTMKQQRESLPVFKFRKQLLEAVTENQLLIVVGDTGSGKTTQLTQYLAEGGFAN 646 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G+IG TQPRR+AA +VA R++EE+ G +GY +RF D S T +K MTDGIL E Sbjct: 647 NGIIGCTQPRRVAAVSVAKRVSEEVGCRLGAEVGYTIRFEDCTSPETKIKYMTDGILQRE 706 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 I D L +Y I++DEAHER+++ D L G LK+ + RRPDLKII+TSAT+D ++FS +F Sbjct: 707 ILLDPDLKKYSVIMLDEAHERTISTDVLFGLLKKTIQRRPDLKIIVTSATLDADKFSEYF 766 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGE 300 N PI + GRTYPVE+ Y + E D L A V ++ E GDIL+F++G+ Sbjct: 767 NMCPIFSIPGRTYPVEIMYS------REPESDYLDAALVTVMQIHLTEPAGDILLFLTGQ 820 Query: 301 REIRDTADALNKLN------LRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAE 352 EI + L + + ILP+Y+ L + Q+R+F+ R++V+ATN+AE Sbjct: 821 EEIDTACEILYERMKALGPSVPELIILPVYSALPSEMQSRIFEPAPPGSRKVVIATNIAE 880 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TS+T+ I YV+DPG + + Y + + L + PISQA A QR GR GR G C RLY Sbjct: 881 TSITIDQIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRSGRAGRTGPGKCFRLY 940 Query: 413 SEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 +E + S T PEI R NL+ IL + A+G+ D+ F F++ P + + L Sbjct: 941 TEAAYQSEMLPTTIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYA 1000 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 L A+ + LT LGR+++ P++P LA++++ + + GC E + I + LS+ Sbjct: 1001 LSALDDEGL-----LTRLGRKMADFPMEPALAKVLIASVEMGCSDEMLSIVAMLSVHSIF 1055 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 RP +KQQ +D+K +FHD D L +N++N +S C +++ ++ Sbjct: 1056 YRPKEKQQQADQKKAKFHDPHGDHLTLLNVYNGW------KNSRFSSPWCFENFIQARQM 1109 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 R QD+ QL +++ V S + AL +G + KD + T Sbjct: 1110 RRVQDVREQLVTIMERYKHKVVSCGRNTTRVRQALCSGFFRNAARKDPQEGYKTLIEGTP 1169 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + P S LF K + V+ LV T++ + I+P+W+ A K Sbjct: 1170 VYMHPSSALFGKAAEHVIFHTLVLTTKEYMHCTTSIEPKWLVEAAPTFFK 1219 >UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=10 Tax=Saccharomycetaceae RepID=PRP22_YEAST Length = 1145 Score = 902 bits (2332), Expect = 0.0, Method: Composition-based stats. Identities = 232/706 (32%), Positives = 383/706 (54%), Gaps = 39/706 (5%) Query: 18 SLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQ------------AAGKVLLRE 65 LR + +++ + +P + + + + + Sbjct: 412 EEKLRKKREIEQQIRKQQSFDDPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYGKR 471 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 + P LPV + ++++A+RD+Q +++ GETGSGKTTQ+ + E G G+I Sbjct: 472 TSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMI 531 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AA +VA R+AEE+ + G +GY +RF D +T +K MTDG+L E D Sbjct: 532 GCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLD 591 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 + +Y I++DEAHER++ D L LK+ +RP+LK+I+TSAT++ +FS +F N P Sbjct: 592 PEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCP 651 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIR 304 II + G+T+PVEV Y + D ++A D V ++ E GDIL+F++G+ EI Sbjct: 652 IINIPGKTFPVEVLYSQTPQM------DYIEAALDCVIDIHINEGPGDILVFLTGQEEID 705 Query: 305 DTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLT 356 + L ++ ILP+Y+ L + Q+++F+ R++V ATN+AETS+T Sbjct: 706 SCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSIT 765 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-D 415 + GI YV+DPG A+I+ Y+ R +++L + PISQA ANQRKGR GR G C RLY+E Sbjct: 766 IDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESA 825 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 + E T PEI R NL+ IL + A+G+ D+ F F++ P K + + + L L ++ Sbjct: 826 FYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSL 885 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 + KLT LG+++S P+DP L+R +L + + C E + I S LS+Q+ RP Sbjct: 886 DDEG-----KLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPK 940 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 D+Q +D K +FH D L +N++ + +N + C+T++L++ ++ + Sbjct: 941 DRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQ------ANYSEQYCKTNFLHFRHLKRAR 994 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 D+ +Q+ + K++G+ + S ++ I ++G + +D+ T I Sbjct: 995 DVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIH 1054 Query: 656 PGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 P S L+ K ++VM +V TSR + I+P+W+ VA H K Sbjct: 1055 PSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYK 1100 >UniRef50_C4QEZ9 ATP-dependent RNA Helicase, putative n=21 Tax=Eukaryota RepID=C4QEZ9_SCHMA Length = 1569 Score = 900 bits (2327), Expect = 0.0, Method: Composition-based stats. Identities = 238/713 (33%), Positives = 379/713 (53%), Gaps = 31/713 (4%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 ++++ TA ++ M +D + + F+++ + G Sbjct: 830 QERQNQVTAERETAPERMGKDWHDPMGFTLDNEPQFSGSRSADQFKDVPEWKRAVQGGTR 889 Query: 63 L----REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG 118 ++ R + LP+ + K ++++A+ D++V+IV GETGSGKTTQ+ + E G Sbjct: 890 TGAVGKKIVRSILEQRQALPIFRLKDELMKAVNDNKVLIVIGETGSGKTTQITQYLAEAG 949 Query: 119 RGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGIL 178 G IG TQPRR+AA +VA R++EE G +GY +RF D + T +K MTDG+L Sbjct: 950 YVNTGRIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTAPETKIKYMTDGML 1009 Query: 179 LAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFS 238 L E D L QY I++DEAHER+++ D L G LK+ + +R D+K+I+TSAT+D +FS Sbjct: 1010 LRECLIDPDLRQYSVIMLDEAHERTIHTDVLFGLLKKAIQKRDDMKLIVTSATLDSVKFS 1069 Query: 239 RHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFM 297 ++F API + GRTYPVE+ Y + E D L A + V ++ E GDIL+F+ Sbjct: 1070 QYFFEAPIFTIPGRTYPVEILYS------LEPENDYLDAALNTVMQIHLTEPPGDILVFL 1123 Query: 298 SGEREIRDTADALNKLN------LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATN 349 +G+ EI + L + + ILP+YA L + Q+R+F R++V+ATN Sbjct: 1124 TGQEEIDSGCELLYERMKALGSEVPELIILPVYAALPSEMQSRIFDPAPPGSRKVVIATN 1183 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AETSLT+ GI YVIDPG + YS ++ + +L + PISQA A QR GR GR G C Sbjct: 1184 IAETSLTIDGIYYVIDPGFVKQKVYSSKSGMDQLIVTPISQAQAKQRAGRAGRTGPGKCY 1243 Query: 410 RLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RLY+E + PEI RTNLAS +LQ+ A+G+ D+ +F F++ P + + + Sbjct: 1244 RLYTERAYRDEMLATNVPEIQRTNLASTVLQLKAMGINDLLSFDFMDPPPLQTLVAAMET 1303 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L L A+ + LT LGR++++ P++P L++M++ + C E + + S LS+Q Sbjct: 1304 LHGLSALDDEGL-----LTRLGRRMAEFPLEPMLSKMLIMSVHLQCSEEVLTVVSMLSVQ 1358 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 + RP +K + +D++ +FH E D L + ++N ++ C ++L Sbjct: 1359 NVFYRPKEKTELADQRKAKFHQPEGDHLTLLAVYNAW------KNNKFSAPWCYDNFLQA 1412 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR 648 ++ QD+ QL ++ + V S + A+L+G + KD + T Sbjct: 1413 RTLKRAQDVRKQLLGIMDRHKLDVVSCGKKTALAQKAILSGFFRNAAKKDPQEGYRTLVD 1472 Query: 649 NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 I P S LF + P WV+ ELV T++ + R IDP W+ A + K Sbjct: 1473 QQVVYIHPSSALFNRQPDWVVYHELVMTTKEYMREVTTIDPRWLVEFAPNFFK 1525 >UniRef50_B6ADS3 DHX8/prp22-type ATP-dependent RNA helicase, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6ADS3_9CRYT Length = 1078 Score = 894 bits (2311), Expect = 0.0, Method: Composition-based stats. Identities = 232/669 (34%), Positives = 368/669 (55%), Gaps = 29/669 (4%) Query: 45 AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGS 104 + + + + + NLP+ ++ +++A+R +Q+++V GETGS Sbjct: 391 QVPEWKRQYFGKNLSFGQKTDITLSIQEQRRNLPIFALRESLVDAVRKNQIIVVIGETGS 450 Query: 105 GKTTQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDH 163 GKTTQ+ + E G G +IG TQPRR+AA +VA R+A+E+ G +G+ +RF D Sbjct: 451 GKTTQITQYLYEEGFCDDGNMIGCTQPRRVAATSVARRVAQEVGCTIGSTVGFSIRFEDV 510 Query: 164 VSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDL 223 S T +K MTDG+LL E D L +Y+ I++DEAHER++ D L G LK RP Sbjct: 511 TSSETRIKYMTDGMLLREALSDHSLSKYNVIMLDEAHERTITTDVLFGLLKATCIERPSF 570 Query: 224 KIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVD 283 ++I+TSAT++ ++FSR+F N I + GRT+PVE+ Y + E D ++A V Sbjct: 571 RLIVTSATLEADKFSRYFMNCNIFAIPGRTFPVEILY------TREPESDYVEAALLTVL 624 Query: 284 ELS-QESHGDILIFMSGEREIRDTADALNKLN-------LRHTEILPLYARLSNSEQNRV 335 ++ +E GDIL+F++G+ EI + L++ ILP+Y+ + Q+ + Sbjct: 625 QIHLREPPGDILVFLTGQEEIDNACRTLHERMQKLENLNPPPLIILPVYSSQPSEVQSLI 684 Query: 336 FQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASA 393 F+ R+ V+ATN+AE SLT+ GI +VIDPG A++ ++ +T + L + PISQASA Sbjct: 685 FEPTPEGCRKCVIATNIAEASLTIDGIYFVIDPGFAKMMVFNSKTGMDSLVVAPISQASA 744 Query: 394 NQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFP 452 QR GR GR G C RLY+E F T PEI RTNL++ +L + ALG+ D+ F Sbjct: 745 RQRSGRAGRTGPGKCYRLYTEIAFKTEMLPVTIPEIQRTNLSNTVLLLKALGINDLLNFD 804 Query: 453 FVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512 F++ P + + L EL A+ + LT LGR++++LP+ P L++MVL + Sbjct: 805 FMDPPPPHTLLIALETLYELDALDDNGI-----LTRLGRKMAELPMSPNLSKMVLSSVDL 859 Query: 513 GCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572 GC E + ITS LS+Q+ RP DKQ A+D +FH D L ++N++N Q+ Sbjct: 860 GCSDEIITITSMLSVQNVFYRPKDKQAAADRHKSKFHHSYGDHLTYLNIYNSWQRQR--- 916 Query: 573 SSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLS 632 C ++L +++ QD+ QL + + + + S +Y +I A+ G S Sbjct: 917 ---YSVPWCYENFLQSRSLKKAQDVRKQLISIFDKYQLNIISARNDYDKIRKAICAGFFS 973 Query: 633 HIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 H KD+ + + N + + P S LF K P+W++ ELV T++ + R I P W+ Sbjct: 974 HACKKDSQEGYRSLVDNQQVYLHPSSTLFNKSPEWLLYHELVFTTKEYIRDCCTIQPNWL 1033 Query: 693 EPVAQHLIK 701 +A +L + Sbjct: 1034 VELAPNLFQ 1042 >UniRef50_A7AWE8 RNA helicase, putative n=2 Tax=Piroplasmida RepID=A7AWE8_BABBO Length = 1156 Score = 892 bits (2305), Expect = 0.0, Method: Composition-based stats. Identities = 233/717 (32%), Positives = 368/717 (51%), Gaps = 33/717 (4%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 +++ +Q+ + + + + + + Sbjct: 425 AKERRETERMQEDTIQRSAGAGSMTNNSTSQFMEELRRMNMKQRREGALHDKRDPGTRKD 484 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 A + ++LP+ + ++L+A++++ ++IV GETGSGK+TQ+P+ E G Sbjct: 485 GHNAIKTIQEQRESLPIFALRDELLQAVQENDILIVVGETGSGKSTQIPQYLAESGYTSG 544 Query: 123 G-----LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 +IG TQPRR+AA +VA R++EE+ G +GY +RF D + +T++K MTDG+ Sbjct: 545 SDGESMVIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGYCIRFEDCTTKDTVIKFMTDGM 604 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LL E+ QD LL QY I++DEAHER++ D L LK +R + K+I+TSAT++ E+F Sbjct: 605 LLREVLQDPLLEQYACIMLDEAHERTIATDVLFALLKNCCSKRENFKLIVTSATLEAEKF 664 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIF 296 S +FN+A I + GR +PVE+ + D E D ++A V + E GDIL+F Sbjct: 665 STYFNDASIFSIPGRMFPVEILH------TTDQESDYMEASLITVLNIHLNEPAGDILLF 718 Query: 297 MSGEREIRDTADALNKLN-------LRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLA 347 ++G+ EI L++ ILP+YA L Q +F+ R+ V+A Sbjct: 719 LTGQEEIDVACRTLHERMKRLESMSPPPLIILPVYAALPGEMQGAIFEPTPPGCRKCVIA 778 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AE SLT+ GI YVIDPG A++ RY+ RT ++ L + PISQASA QR GR GR G Sbjct: 779 TNIAEASLTIDGIFYVIDPGFAKVKRYNPRTGMESLVVVPISQASAKQRAGRAGRTGPGK 838 Query: 408 CIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RLY+ED + S PEI RTNLA+V++ + A+G+ D F F++ P + D + Sbjct: 839 CYRLYTEDAYRSEMLPTAVPEIQRTNLANVVILLKAMGINDFLNFDFMDKPPVETLIDAL 898 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 L LGA+ + LT LGR++++ P+DP LA+M+L + C E + I S LS Sbjct: 899 DNLYHLGALDDEGL-----LTRLGRKMAEFPMDPNLAKMLLTSVDLECSDEVITIVSMLS 953 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 IQ+ RP DKQ +D RF E D L + ++N + + C ++L Sbjct: 954 IQNIFYRPQDKQAEADRAKSRFTQAEGDHLTLLYVYNQWRK------NKFSSVWCHENFL 1007 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 + QD+ QL ++ V S I ++ G H +D + T Sbjct: 1008 QSRALLRAQDVRKQLISIMDRYRFKVVSCGNNAEVISKSVCAGYFHHSARRDPQEGYRTI 1067 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 I P S L+ + P++V+ ELV T++ + R + +W+ +A + KR+ Sbjct: 1068 VDQQNVFIHPSSALYNRSPEYVVYHELVMTTKEYMRDLTIVKAQWLLELAPSMFKRS 1124 >UniRef50_Q54MH3 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=5 Tax=Eukaryota RepID=DHX16_DICDI Length = 1106 Score = 891 bits (2304), Expect = 0.0, Method: Composition-based stats. Identities = 235/650 (36%), Positives = 365/650 (56%), Gaps = 28/650 (4%) Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 +A +LPV ++ +++A+R++QV+I+ GETGSGKTTQ+P+ E G G Sbjct: 455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK 514 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IG TQPRR+AA +VA R+AEE+ + G +GY +RF D S T+++ MTDG+L+ E Sbjct: 515 IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLT 574 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 L Y +IIDEAHER+L+ D L G LK++ RPDLK++I+SAT+D ERFS +F+ A Sbjct: 575 APDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGA 634 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREI 303 P + GR Y V Y E D L A V ++ E GDIL+F++G+ E+ Sbjct: 635 PTFNIPGRKYEVTTHY------TQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEV 688 Query: 304 RDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSL 355 A+ L + I +Y+ L Q ++F+ + R++VLATN+AETSL Sbjct: 689 DQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSL 748 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+ GI YVIDPG + ++ RT ++ L I P+S+ASANQRKGR GRV+ G C RL++ Sbjct: 749 TIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAW 808 Query: 416 DFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 F + E T PEI RTNL +V+L + ++G+ D+ F F++ P + + + L LGA Sbjct: 809 AFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGA 868 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRER 533 + +LT LGR++++ PVDP+L++M++ ++K+ C E + I + LS+ + R Sbjct: 869 LND-----RGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYR 923 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P DK A+D + F + D L +N++N E S + C +++ + ++ Sbjct: 924 PKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRE------SGYAVQWCFENFIQHRSMKR 977 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 QD+ QL +++ + IP+ S + I + +G + + T N Sbjct: 978 AQDVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQ 1037 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 I P S LF+ PPKWV+ ELV T++ + R I W+ +A H+ K Sbjct: 1038 IHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEK 1087 >UniRef50_C5KUX0 ATP-dependent RNA helicase DHX8, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUX0_9ALVE Length = 1239 Score = 887 bits (2293), Expect = 0.0, Method: Composition-based stats. Identities = 238/746 (31%), Positives = 402/746 (53%), Gaps = 53/746 (7%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++++ + A+Q+++ + +D + + NP + + + I + Sbjct: 502 LAQERRESKQAMQEQVIKAIPKD-------MSRPWEDPNPHQGERTLAQNLRSITMNSAS 554 Query: 61 VLL-------------REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 + +A P + LP+ + + +L+A+ ++QV+IV GETGSGKT Sbjct: 555 QNQIRKHGAPTGVAYGQRSALPMREQREGLPIFKLRSQLLQAMAENQVLIVIGETGSGKT 614 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+ + E G G+IG TQPRR+AA TVA R+AEE G +GY +RF DH S Sbjct: 615 TQMTQYMAEAGYADHGIIGCTQPRRVAAITVAKRVAEEYGCRLGQEVGYTIRFEDHTSPE 674 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 T +K MTDG+LL E D LL +Y I++DEAHER+++ D L G KE + R DLK+I+ Sbjct: 675 TRIKYMTDGMLLREALADPLLKKYSVIMLDEAHERTIHTDVLFGLCKEAIRERNDLKLIV 734 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS- 286 TSAT+D E+FSR+F ++ I + GRT+PVE+ Y ++ E D +QA V ++ Sbjct: 735 TSATLDAEKFSRYFFDSHIFTIPGRTFPVEILYS------NEPEEDYVQAALMTVMQIHL 788 Query: 287 QESHGDILIFMSGEREIRDTADALNKLN-------LRHTEILPLYARLSNSEQNRVFQ-- 337 E GDIL+F++G+ EI L++ + +YA + Q+ +F+ Sbjct: 789 TEQPGDILVFLTGQEEIDTACQLLDERMAQLAPMNPPPLIPMGVYAAQPSEVQSSIFEPA 848 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 R+ V+ATN+AE S+T+ GI +V+DPG A+I ++ +T++ L + PISQA+A QR Sbjct: 849 PPGSRKCVVATNIAEASITIDGIYFVVDPGFAKIKTFNAKTQMDALIVTPISQANARQRA 908 Query: 398 GRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GR G C RLY+E F PEI R+NL++V+L + A+G+ D+ F F++A Sbjct: 909 GRAGRTGPGKCYRLYTEKAFRTEMLPSAVPEIQRSNLSNVVLTLKAMGINDLLGFDFMDA 968 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 P + + + + L +LGA+ + LT LGR++++ P+ P ++M+L + GC Sbjct: 969 PPVQTLINSLEALWQLGALDDEGL-----LTKLGRKMAEFPMPPEQSKMLLASVDLGCAD 1023 Query: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA 576 EA+ + + LS+Q+ RP DKQ +D+K +F+ E D + + ++ + Sbjct: 1024 EAITVVAMLSVQNVFYRPKDKQAVADQKKSKFNSPEGDHVTLLEVYKAWSR------NRF 1077 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 C +++ +R+ QD+ QL ++ + +NS +Y + A+ G +++ Sbjct: 1078 SAPWCYENFIQVRSLRKAQDVRKQLIGIMDRYRLEINSCGQDYNRLRQAIAAGYFNNLCR 1137 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 +D ++ + I P S L++K P+WV+ ELV T+R + R ++PEW+ +A Sbjct: 1138 RDPNEGYRVMRDLQQVYIHPSSALYQKNPEWVIYYELVMTTREYIREVCTVEPEWMPKIA 1197 Query: 697 QHLIKRTYSEPHWERAQGAVMATEKV 722 ++ K+ R + A EK+ Sbjct: 1198 PNMFKQAD-----NRGISRMKANEKI 1218 >UniRef50_C4M6S9 Helicase, putative n=3 Tax=Entamoeba RepID=C4M6S9_ENTHI Length = 953 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 234/685 (34%), Positives = 386/685 (56%), Gaps = 28/685 (4%) Query: 29 RRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILE 88 + + +++V A + KE +Q K +E + LP+ + ++E Sbjct: 246 KEIKSIEEVIEEIGVIAPKDKERKEWEQREEK-ATKEYKKSIEEKRKELPIYSMRNKLME 304 Query: 89 AIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKT 148 +I+ +Q++I+ GETG GKTTQL + E G G IG TQPRR+AA +V+ R+AEE+K Sbjct: 305 SIKKNQIIILIGETGCGKTTQLTQYLDEDGYSKNGRIGCTQPRRVAAISVSQRVAEEMKV 364 Query: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 + G +GY +RF D ++ T +K MT+G+LL E DR L QY +I+DEAHER++ ID Sbjct: 365 KLGEEVGYSIRFEDKTTEKTRIKYMTNGMLLREYLVDRDLPQYKVLILDEAHERTVGIDI 424 Query: 209 LLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEAD 268 L G LKE + RRP+ K+IITSAT+D ++FS +FN APII + GRT+PVE Y + Sbjct: 425 LFGLLKETIKRRPEFKLIITSATLDADKFSIYFNKAPIIHIPGRTFPVEKLYL------E 478 Query: 269 DTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK------LNLRHTEIL 321 + E D +Q+ + + ++ + GDIL F++G+ EI T +N+ L Sbjct: 479 EPEMDYIQSGIETIMKIHLTQPPGDILFFLTGQEEIDSTCSIINEKVQKLDKRYPKLIAL 538 Query: 322 PLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK 379 P+YA LS +Q R+F+ R+ ++ATN+AETS+T+ GI +V+D G + ++ R Sbjct: 539 PIYASLSTEQQKRIFEPAPPFTRKCIVATNIAETSITIDGIYFVVDSGFVKQKVHNPRLG 598 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVIL 438 + +L I PISQA A+QR GR GR G C RLY+E + P + PEI R NLA +L Sbjct: 599 MDQLLITPISQACADQRAGRAGRTGPGKCYRLYTEKAYLNEMPIVSIPEIQRANLADTVL 658 Query: 439 QMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPV 498 + A+G+ ++ F +++ P + + L + A+ D KLT LGR++++ P+ Sbjct: 659 ILKAIGINNVIDFDYMDPPMHNTLISALHHLYAISALDDDG-----KLTQLGRKMAEFPL 713 Query: 499 DPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAF 558 +P LA+M++ +++ GC E + I +ALS+ + RP +K++ +D + R+ D L Sbjct: 714 EPPLAKMLIVSEQFGCSEEVVTIVAALSVGNLFIRPKEKEEEADRRKRQLSSSAGDHLTM 773 Query: 559 VNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE 618 + ++N + K+ S C+ +Y+N+ + + +DI QL +++K+ I + S Sbjct: 774 LQVYNNWIKNGKSPS------WCKENYINFRSLYKCEDIRKQLIKIMKKYHIQLISSHNN 827 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 I ++++G H +D + T + I P S LF + P+WV+ ELV T++ Sbjct: 828 PIPIIKSIVSGFFVHAAKRDPQEGYRTLVDGQQVFIHPTSSLFGRNPEWVVYHELVLTTK 887 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRT 703 + R IDP+W+ +A +++ Sbjct: 888 EYMREIIAIDPQWLIELAPAFYQKS 912 >UniRef50_B2ANS3 Predicted CDS Pa_6_9920 n=3 Tax=Saccharomyceta RepID=B2ANS3_PODAN Length = 1151 Score = 884 bits (2285), Expect = 0.0, Method: Composition-based stats. Identities = 223/686 (32%), Positives = 352/686 (51%), Gaps = 43/686 (6%) Query: 25 LRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQ 84 + +++ ++ K + + + ++LPV ++ Sbjct: 452 PENRQFASDLRRRAQATQAESDSVPEWKRAVVPKDQPTGKRSDMTIKEQRESLPVFAFRE 511 Query: 85 DILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAE 144 ++ A+R++QV+IV GETGSGKTTQL + E G G+IG TQPRR+AA +VA R++E Sbjct: 512 QLINAVRENQVLIVVGETGSGKTTQLTQYLAEAGFTNNGIIGCTQPRRVAAVSVAKRVSE 571 Query: 145 ELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSL 204 E+ G +GY +RF D S T +K MTDG+L EI D L +Y I++DEAHER++ Sbjct: 572 EVGCRLGEEVGYTIRFEDVTSPATKIKYMTDGMLEREILIDPELGRYSVIMLDEAHERTI 631 Query: 205 NIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIV 264 D L LK+ + R DLK+I+TSAT+D ++FS +FN PI + GRT+PVE+ Y Sbjct: 632 ATDVLFALLKKTMKSRKDLKVIVTSATLDADKFSEYFNACPIFTIPGRTFPVEILYSREP 691 Query: 265 EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLN------LRHT 318 E GDIL+F++G+ EI + + L + + Sbjct: 692 -----------------------EPMGDILLFLTGQEEIDTSCEILFERMKALGPSVPEL 728 Query: 319 EILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 376 ILP+Y+ L + Q+R+F R++V+ATN+AETS+T+ I YVIDPG + + Y Sbjct: 729 IILPVYSALPSEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVIDPGFVKQNAYDP 788 Query: 377 RTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLAS 435 + + L + PISQA ANQR GR GR G C RLY+E + S T PEI R NL++ Sbjct: 789 KLGMDSLIVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSN 848 Query: 436 VILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQ 495 IL + A+G+ D+ F F++ P + + L LGA+ + LT LGR+++ Sbjct: 849 TILMLKAMGINDLIRFDFMDPPPVNTMLTALEELYALGALDDEGL-----LTRLGRKMAD 903 Query: 496 LPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDF 555 P++P L+++++ + GC E + I + L++ RP DKQ +D+K +FHD D Sbjct: 904 FPMEPSLSKVLISSVDKGCSDEVVSIVAMLNLSTIFYRPKDKQNQADQKKAKFHDPHGDH 963 Query: 556 LAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615 L +N++N + C +++ +R +D+ Q+ +++ P+ S Sbjct: 964 LTLLNVYNSW------KNHGFSPTWCHENFIQARSMRRAKDVRDQIVKIMNRHRHPIVSC 1017 Query: 616 PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVE 675 E + AL +G + KD + T + P S LF K +WV+ LV Sbjct: 1018 GRETDRVRQALCSGFFRNTARKDPQEGYKTLTEGTPVYLHPSSALFGKQAEWVIYHTLVL 1077 Query: 676 TSRLWGRIAARIDPEWVEPVAQHLIK 701 T+R + I+P+W+ A K Sbjct: 1078 TTREYMHFTTAIEPKWLIDAAPTFFK 1103 >UniRef50_O22899 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=8 Tax=Eukaryota RepID=DHX15_ARATH Length = 729 Score = 884 bits (2284), Expect = 0.0, Method: Composition-based stats. Identities = 238/709 (33%), Positives = 377/709 (53%), Gaps = 46/709 (6%) Query: 33 GVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRD 92 K K+ A + + + +LPV +K D L + Sbjct: 21 SSKNTKSNGLGLAAAAGGGSNLINKWNGKAYSQRYFEILEKRRDLPVWLQKDDFLNTLNS 80 Query: 93 HQVVIVAGETGSGKTTQLPKICMEL------GRGIKGLIGHTQPRRLAARTVANRIAEEL 146 +Q +I+ GETGSGKTTQ+P+ ++ +G K L+G TQPRR+AA +V+ R+A+E+ Sbjct: 81 NQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEM 140 Query: 147 KTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNI 206 G +GY +RF D S TM+K +TDG+LL E D LL +Y II+DEAHER+L Sbjct: 141 DVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLAT 200 Query: 207 DFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEE 266 D L G LKE+L RPDLK+++ SAT++ E+F +F+ AP+++V GR +PVE+ Y Sbjct: 201 DVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFY------ 254 Query: 267 ADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLNLR------HTE 319 + ERD L+A V ++ E GDIL+F++GE EI D +NK + Sbjct: 255 TQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVK 314 Query: 320 ILPLYARLSNSEQNRVFQS---------HSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 ++PLY+ L + Q ++F +GR+IV++TN+AETSLT+ GI YVIDPG A+ Sbjct: 315 VVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAK 374 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEIL 429 Y+ R +V+ L + PIS+ASA+QR GR GR G C RLY+E F + T PEIL Sbjct: 375 QKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEIL 434 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 R+NLA+ +L + LG+ D+ F F++ P + + +L LGA+ + LT Sbjct: 435 RSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGN-----LTKT 489 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549 G +S+ P+DP++++M++ + + C E + +++ LS+ + RP + Q+A+DE RF Sbjct: 490 GEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFG 549 Query: 550 DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 + D L +N+++ + +N C +++N ++ ++ QL +++ Sbjct: 550 HIDGDHLTLLNVYHAYKQ------NNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFN 603 Query: 610 IPVNSEPAE----YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 + + S Y I A+L G + + T N + P + L K P Sbjct: 604 LKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHK-P 662 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 +WV+ E V T+R + R I EW+ VAQH + P+ E + Sbjct: 663 EWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNF-PNCEAKRA 710 >UniRef50_B0JZ95 Dhx16 protein n=5 Tax=Fungi/Metazoa group RepID=B0JZ95_XENTR Length = 1016 Score = 880 bits (2274), Expect = 0.0, Method: Composition-based stats. Identities = 236/704 (33%), Positives = 375/704 (53%), Gaps = 35/704 (4%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL----LREAARPEITYPDN 76 +D ++ + +N Q +M ID+ + Sbjct: 314 AKDAHDHGKKEYDFVMEENEVIQFVSSAQMKGTIDKEEENSEVLSESERKKLSIQEVRRS 373 Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAA 135 LPV + D+L+AI DHQ++I+ GETGSGKTTQ+P+ E G G IG TQPRR+AA Sbjct: 374 LPVFPYRSDLLQAISDHQILIIEGETGSGKTTQIPQYLHEHGYTKNGLKIGCTQPRRVAA 433 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +V+ R+++E+ + G +GY +RF D S+ T++K MTDG+LL E + L Y II Sbjct: 434 MSVSARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVII 493 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 IDEAHER+L+ D L G +K++ R DLK+++ SAT++ ERFS F++AP+ + GR YP Sbjct: 494 IDEAHERTLHTDVLFGLIKDIARFRQDLKVLVASATLNTERFSSFFDDAPVFRIPGRRYP 553 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLN 314 V++ Y E D L+A +V ++ + GDIL+F++G+ EI + L + Sbjct: 554 VDIYY------TKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIETCCEMLQERC 607 Query: 315 LR------HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDP 366 R +LP+YA L + Q ++F+ R++V+ATN+AETSLT+ GI YVIDP Sbjct: 608 RRLGSKIAEMLVLPIYANLPSDMQAKIFEPTPPGARKVVIATNIAETSLTIDGIIYVIDP 667 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTD 425 G + Y+ R+ ++ L + P S+ASANQR GR GRV+ G C RLY+ + + T Sbjct: 668 GFCKQKSYNARSGMESLIVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEDTTV 727 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI RTNL +V+L + +LG+ D+ F F++ P + + L LGA+ + Sbjct: 728 PEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALN-----HLGE 782 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDEK 544 LT LGR++++LPVDP L++++L ++++GC + + I + LS+ + RP DK +D Sbjct: 783 LTKLGRRMAELPVDPMLSKIILASEQYGCSEQILTIAAMLSVNNTIFYRPKDKLVHADTA 842 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 F D + +N++ E +L + C +++ +R +D+ QL + Sbjct: 843 RANFTVPGGDHMVLLNVYTQWVESGHSL------QWCYENFIQARSLRRARDVREQLEGL 896 Query: 605 VKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP 664 + + I + S + + A+ G H T + I P S L ++ Sbjct: 897 MGRIEIELTSCEGDSIPVRKAITAGYFYHTARLTRSG-YKTVKQQQAVYIHPNSSLHEEQ 955 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK-RTYSEP 707 P+WV+ ELV T++ + R ID W+ VA H K R +P Sbjct: 956 PRWVIYHELVFTTKEYMRQIIEIDSTWLLEVAPHYYKSRELEDP 999 >UniRef50_Q6P404 DEAH (Asp-Glu-Ala-His) box polypeptide 38 n=9 Tax=Eukaryota RepID=Q6P404_DANRE Length = 1258 Score = 879 bits (2272), Expect = 0.0, Method: Composition-based stats. Identities = 229/735 (31%), Positives = 380/735 (51%), Gaps = 33/735 (4%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 ++++ L L D + ++ G + + ++ K D K Sbjct: 486 QKERKKAQHKHWELAGTKLGDIMGIQKKEDGGDSKAVGEDGKVDYRAEQKFADHMKEKSE 545 Query: 63 LRE---AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR 119 + + LP+ +Q +L IRD+ +VIV GETGSGKTTQL + E G Sbjct: 546 ASSDFAKKKTLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGY 605 Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 G++G TQPRR+AA +VA R++EE+ + G +GY +RF D S+ TM+K MTDGILL Sbjct: 606 TSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILL 665 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 E ++ L Y +I+DEAHERSLN D L G L+E++ RR DLK+I+TSAT+D ++F+ Sbjct: 666 RESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFAS 725 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILIFMS 298 F N PI + GRT+PV++ + + D ++A ++ GDILIFM Sbjct: 726 FFGNVPIFHIPGRTFPVDILFS------KTPQEDYVEAAVKQALQIHLSGMVGDILIFMP 779 Query: 299 GEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVA 351 G+ +I T+D + + N +LP+Y++L + Q ++FQ R+ ++ATN+A Sbjct: 780 GQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA 839 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLTV GI +V+D G ++ ++ R + L + PISQA+ANQR GR GR G C RL Sbjct: 840 ETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRL 899 Query: 412 YSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 Y++ F T PEI RTNLA+V+L + +LG+ D+ F F++ P + N+ + + L Sbjct: 900 YTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLW 959 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 LGA+ + LTP GR + + P+DP L++M++ + C + +II S LS+ Sbjct: 960 ILGALD-----NTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSI 1014 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RP +++ SD+ +F ESD L ++N++ ++N C +++ Sbjct: 1015 FYRPKGREEESDQVREKFSVPESDHLTYLNVYLQW------KNNNYSSIWCNDHFIHTKA 1068 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 +R+ +++ QL+ ++ + + + S +++ I + + Sbjct: 1069 MRKVREVRAQLKDIMVQQKMNLISCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGM 1128 Query: 651 RFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPH 708 + P S LF P +++ ELV T++ + + +D EW+ + + Sbjct: 1129 PCHLHPTSALFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKH--AG 1186 Query: 709 WERAQGAVMATEKVT 723 R + A E++T Sbjct: 1187 KSRQENRRRAKEEIT 1201 >UniRef50_C4QXH4 DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase n=1 Tax=Pichia pastoris GS115 RepID=C4QXH4_PICPG Length = 1005 Score = 878 bits (2269), Expect = 0.0, Method: Composition-based stats. Identities = 228/700 (32%), Positives = 378/700 (54%), Gaps = 34/700 (4%) Query: 27 FSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDI 86 + +KK P+ I ++++ D + + ++LPV KQ + Sbjct: 305 LLKERKELKKGLRPE----ISNKVSEWKDSIKKDSYGKTTTKNLQEQRESLPVFSMKQML 360 Query: 87 LEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG-HTQPRRLAARTVANRIAEE 145 LE +++++ V++ GETGSGKTTQ+ + E G +I TQPRR+AA +VA R++EE Sbjct: 361 LETVKNNKFVVIVGETGSGKTTQITQYLAEEGFNKGNMIIGCTQPRRVAAVSVAKRVSEE 420 Query: 146 LKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLN 205 + G +GY +RF D+ SD T +K MTDG+L E D++L +Y I++DEAHER++ Sbjct: 421 VGCRLGQEVGYTIRFEDNTSDVTKIKYMTDGMLQREAMVDKMLSKYSVIMLDEAHERTIA 480 Query: 206 IDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 D L LK +R DLKII+TSAT+D +FS +F N PII++ GRT+PVE+ Y Sbjct: 481 TDVLFVLLKTAAMKRDDLKIIVTSATLDSGKFSTYFENCPIIQIPGRTFPVEIFY----- 535 Query: 266 EADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNK-----LNLRHTE 319 + E D LQA + V + + ES GDIL+F++G+ EI + L + Sbjct: 536 -TKEPELDYLQATLECVLSIHKNESRGDILVFLTGQEEIDTCCEVLYEKLIDLHQENELI 594 Query: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 ILP+Y+ L + Q+++F+ R++++ATN+AETS+T+ GI YVIDPG +++ Y + Sbjct: 595 ILPIYSSLPSEMQSKIFEPTPVGKRKVIIATNIAETSITIDGIYYVIDPGFVKVNAYDPK 654 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASV 436 + L + PISQA A QR GR GR G C RLY+E + + PEI R NLA Sbjct: 655 LGMDSLMVTPISQAQAKQRAGRAGRTGPGKCFRLYTETGYNKEMLPNSIPEIQRQNLAHT 714 Query: 437 ILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQL 496 IL + A+G+ D+ F F++ P + + + L L A+T D LT LGR+++ Sbjct: 715 ILMLKAMGVQDLIGFEFMDPPPLKTMLSALEELYNLEALTEDGD-----LTELGRRMADF 769 Query: 497 PVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM-DKQQASDEKHRRFHDKESDF 555 P+DP LA++++++ + GC E + I S LS+Q RP + ++ +DEK RF+ D Sbjct: 770 PMDPGLAKVLIKSIEFGCSEEMLSIVSMLSVQSIFYRPTGELRKKADEKRVRFNHPHGDH 829 Query: 556 LAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615 + +N++ + + + + C+ ++++Y + +D+ TQL++++ + G + S Sbjct: 830 MTMLNVYEKW------VRNGSSKEWCKDNFIHYRSLLRVRDVRTQLKKIMNKYGSEMRSC 883 Query: 616 PAEYREIHIALLTGLLSHIGMKDADKQ-EYTGARNARFSIFP-GSGLFKKPPKWVMVAEL 673 I + L G + KD++ T N + P S K ++V+ L Sbjct: 884 GQNSNLIRVNLCCGFFKNTAKKDSETSCYKTLLENTTVYLHPSSSLFGKSSSEYVIYHTL 943 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 + T++ + + I+P W+ A + +E +R + Sbjct: 944 LLTTKEYMHCVSVIEPTWLVEQAPRFFAKADTEQVNKRKR 983 >UniRef50_A0D4B2 Chromosome undetermined scaffold_37, whole genome shotgun sequence n=4 Tax=Oligohymenophorea RepID=A0D4B2_PARTE Length = 1059 Score = 872 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 230/703 (32%), Positives = 379/703 (53%), Gaps = 38/703 (5%) Query: 14 QRLDSLMLRDRLRFSRRLHGVKKVKNPD-----AQQAIFQEMAKEIDQAAGKVLLREAAR 68 ++ +M DR + + + + N D + +Q + + Q + + Sbjct: 255 SKMGKVMNLDR---KKEMDPDRHLLNEDGDYDFKASSRYQTALQRVTQGQSDFARNKTIK 311 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 + LPV + ++++ + D++V I+ GETGSGKTTQL + E G G+IG T Sbjct: 312 ---EQREYLPVFHCRSELVQLLHDNRVCIIVGETGSGKTTQLTQYLYEEGYTNTGVIGCT 368 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA +VA R+AEE+ E G +GY +RF D+ S +T++K MTDG+LL E QD L Sbjct: 369 QPRRVAAVSVAKRVAEEMGVELGSKVGYAIRFEDYTSKDTVIKYMTDGVLLRESLQDPDL 428 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 +Y +I+DEAHERSLN D L G LK++ RR D++I+ITSAT++ ++FS F PI + Sbjct: 429 EKYSAVIMDEAHERSLNTDVLFGILKKVAQRRRDIRIVITSATMNAKKFSDFFGGVPIYK 488 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIRDTA 307 + GRT+PV+VR+ +D ++ AI ++ Q+ GD+LIFM+G+ +I T Sbjct: 489 IPGRTFPVDVRF------EKAPAQDYVRSAIKKTIEVHIQQPPGDVLIFMTGQEDIETTC 542 Query: 308 DALNK------LNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIK 361 L + ILP+Y++L + EQ R+F+ R+ ++ATN+AETSLT+ G+K Sbjct: 543 YLLAEELNKLSEATPPLLILPIYSQLRSEEQARIFEKSEFRKCIVATNIAETSLTLDGVK 602 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-R 420 YVID G ++ Y+ R + L + PISQA+A+QRKGR GR GIC RLYS ++ Sbjct: 603 YVIDTGYCKMKVYNPRIGMDALQVTPISQANADQRKGRAGRTGPGICFRLYSSLNYRQDM 662 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 E PEI RTNLA+V+L + +L + ++ F F++ P + I + + L LGA+ Sbjct: 663 LENNIPEIQRTNLANVVLLLKSLNINNLLDFDFMDPPPQDTILNAMYQLWVLGALD---- 718 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 + +LT LGR++S+ P+DP L++M+++ + GC E + + S LS+ RP D++ Sbjct: 719 -NVGELTELGRKMSEFPLDPPLSKMLIKGDQLGCTEEILTVVSMLSVPGIFYRPKDREAE 777 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 SD + ESD L +N++ + C ++ +R+ +++ Q Sbjct: 778 SDAAREKLFVGESDHLTMLNVFEQWKRHE------FSPEWCNEHFVQAKSMRKVREVRAQ 831 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 L+ + +LG+ +++ Y + A+ + + + P S L Sbjct: 832 LKDIAGKLGLKMSTCNFSYDVVRKAICSAYFQNAAKIKGVGDYINLRTGMPCKLHPSSAL 891 Query: 661 F--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + P +V+ ELV TS+ + + +DP+W+ + Sbjct: 892 YSLGYAPDYVVYHELVMTSKEYMHCVSAVDPQWLAEMGPMFFS 934 >UniRef50_Q5KGT3 Pre-mRNA splicing factor, putative n=7 Tax=Dikarya RepID=Q5KGT3_CRYNE Length = 1261 Score = 871 bits (2252), Expect = 0.0, Method: Composition-based stats. Identities = 218/692 (31%), Positives = 356/692 (51%), Gaps = 33/692 (4%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVS 80 ++D + +N A + K + + + LP Sbjct: 507 VKDEPDLGQEGQKDGVTENYKADSQFSSHLKK--SEGVSNFAKSRTLK---EQREYLPAF 561 Query: 81 QKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVAN 140 +++++ IRDHQV++V GETGSGKTTQL + E G G+IG TQPRR+AA +VA Sbjct: 562 AVREELMGMIRDHQVLVVVGETGSGKTTQLGQFLYEDGYCANGMIGCTQPRRVAAMSVAK 621 Query: 141 RIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAH 200 R++EE++ G +GY +RF D S +T +K MTDG+LL E + L +Y II+DEAH Sbjct: 622 RVSEEMECTLGETVGYAIRFEDCTSKDTKIKFMTDGVLLRESLNEGDLDRYSVIILDEAH 681 Query: 201 ERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRY 260 ERSL+ D L+G L+++L RR DLK+I+TSAT++ E+FS+ F NA + GRT+PVE+ + Sbjct: 682 ERSLSTDILMGLLRKILTRRRDLKLIVTSATMNAEKFSQFFGNAATYTIPGRTFPVEIFH 741 Query: 261 RPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-----N 314 D + + V ++ S GDIL+FM+G+ +I + + + Sbjct: 742 S------KSPCEDYVDSAIKQVLQIHLSSSQGDILVFMTGQEDIECCCQVIEERLSQLDD 795 Query: 315 LRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 +LP+Y+++ Q ++FQ R++V+ATN+AETSLTV GI YV+D G +++ Sbjct: 796 PPPLAVLPIYSQMPADLQAKIFQPTPDGRRKVVVATNIAETSLTVDGILYVVDCGYSKLK 855 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRT 431 Y+ + + L I PISQA+ QR GR GR G C RLY+E + PEI RT Sbjct: 856 VYNPKVGMDALQITPISQANCGQRAGRAGRTGPGFCYRLYTETAYLNELFASNIPEIQRT 915 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491 NLA+ +L + +LG+ ++ F F++ P + NI + + L LGA+ + LT +GR Sbjct: 916 NLANTVLLLKSLGVKNLLEFDFMDPPPQENILNSMYQLWVLGALD-----NVGNLTSIGR 970 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 ++S P++P LA+M++ + + C E + I S LS+ RP + + SD +F Sbjct: 971 KMSDFPMEPSLAKMLIVSVDYQCSSEMLTIVSMLSVPSVFYRPPQRAEESDAAREKFFVP 1030 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 ESD L ++++ S+ C +L+ +R+ +++ QL ++K+ + Sbjct: 1031 ESDHLTLLHVYTQW------KSNGYSDSWCMKHFLHPKLMRKAREVRGQLEDIMKQQKMD 1084 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVM 669 + S ++ + + G + + P S L+ P +V+ Sbjct: 1085 LLSVGTDWDIVRKCITAGYFHQAARVKGIGEYMNIRTGLPCVLHPTSALYGLGYMPDYVV 1144 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 ELV TS+ + +DP W+ + Sbjct: 1145 YHELVLTSKQYMMCVTSVDPYWLADLGSVFFS 1176 >UniRef50_Q92620 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=55 Tax=Fungi/Metazoa group RepID=PRP16_HUMAN Length = 1227 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 226/714 (31%), Positives = 370/714 (51%), Gaps = 29/714 (4%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 ++++ L L D + + K V ++ + + + Sbjct: 457 QKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKAVTEDGKVDYRTEQKFADHMKRKSEAS 516 Query: 63 LR-EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 + + LP+ +Q++L IRD+ +VIV GETGSGKTTQL + E G Sbjct: 517 SEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTD 576 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G+IG TQPRR+AA +VA R++EE+ G +GY +RF D S+NT++K MTDGILL E Sbjct: 577 YGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRE 636 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 ++ L Y II+DEAHERSLN D L G L+E++ RR DLK+I+TSAT+D E+F+ F Sbjct: 637 SLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFF 696 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES-HGDILIFMSGE 300 N PI + GRT+PV++ + + D ++A ++ GDILIFM G+ Sbjct: 697 GNVPIFHIPGRTFPVDILFS------KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQ 750 Query: 301 REIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAET 353 +I T+D + + N +LP+Y++L + Q ++FQ R+ ++ATN+AET Sbjct: 751 EDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET 810 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLTV GI +VID G ++ ++ R + L I PISQA+ANQR GR GR G C RLY+ Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870 Query: 414 EDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 + + T PEI RTNLA+V+L + +LG+ D+ F F++ P + N+ + + L L Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532 GA+ + LT GR + + P+DP L++M++ + GC E ++I S LS+ Sbjct: 931 GALD-----NTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFY 985 Query: 533 RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 RP +++ SD+ +F ESD L ++N++ ++N C +++ +R Sbjct: 986 RPKGREEESDQIREKFAVPESDHLTYLNVYLQW------KNNNYSTIWCNDHFIHAKAMR 1039 Query: 593 EWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 + +++ QL+ ++ + + + S ++ + + + Sbjct: 1040 KVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPC 1099 Query: 653 SIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 + P S LF P +++ ELV T++ + + +D EW+ + Sbjct: 1100 HLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQ 1153 >UniRef50_Q75EQ9 AAR020Wp n=2 Tax=Saccharomycetaceae RepID=Q75EQ9_ASHGO Length = 1112 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 231/705 (32%), Positives = 381/705 (54%), Gaps = 33/705 (4%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++ + ALQ+ D + R R L K + + A Sbjct: 378 LLQEHRQEKLALQKSTDK-----KERLLRELDDSGHKKKAFEDKQRALTAWERKRMAEKV 432 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 + ++LPV + ++ ++ AIRD+Q +++ GETGSGKTTQ+ + E G Sbjct: 433 TYGKRTNLSIKQQRESLPVFKMRETLVSAIRDNQFLVIVGETGSGKTTQITQYLDEEGFS 492 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 + G+IG TQPRR+AA +VA R++EE+ + G +GY +RF D S T +K MTDG+L Sbjct: 493 VGGMIGCTQPRRVAAVSVAKRVSEEMGCKLGEDVGYTIRFEDQTSRKTRIKYMTDGMLQV 552 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E D + +Y I++DEAHER+++ D L LK+ +RPDL++I+TSAT+D E+FS++ Sbjct: 553 EALLDPTMSRYSVIMLDEAHERTVSTDVLFSLLKQAALKRPDLRVIVTSATLDSEKFSKY 612 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSG 299 F + P+I++SG+T+PV+V Y + + D ++A D V E+ ES GDIL+F++ Sbjct: 613 FLDCPVIKISGKTFPVDVIYS------ETPQLDYIEAALDTVMEIHINESPGDILVFLTS 666 Query: 300 EREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVA 351 + EI + L + ++ ILP+Y+ L + Q+++F+ R+++ ATN+A Sbjct: 667 QEEIDACCEILYERVQALKETIQELLILPVYSALPSEVQSKIFEPTPKGSRKVIFATNIA 726 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETS+T+ GI YV+DPG A+ + Y+ + +++L + PISQ+ A+QRKGR GR G C RL Sbjct: 727 ETSITIDGIYYVVDPGYAKSNIYNPKIGIEQLVVSPISQSQADQRKGRAGRTGPGKCYRL 786 Query: 412 YSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 ++E F + PEI R NL IL + A+G+ D+ F F++ P + ++ + L Sbjct: 787 FTEAAFHREMVPNSVPEIQRQNLEHTILMLKAMGINDLLNFDFMDPPPRSSMVHALEALY 846 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 L A+ D LT LG+++SQ P++P L++ ++ + + GC E + I + LS+Q+ Sbjct: 847 NLQALDEDGY-----LTQLGKRMSQFPMEPALSKSLIASVEQGCSDEILTIIAMLSVQNV 901 Query: 531 RERPMDKQQASDEKHRR-FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 RP DK Q + + FH D L +N+ N E +N + C ++L+ Sbjct: 902 FYRPKDKIQETRYSKKHGFHHPFGDHLTLLNIHNRWQE------NNFSKSFCAENFLHER 955 Query: 590 RVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 +R +D+ QL+++ K L +P+ S I L++G + +D T Sbjct: 956 HLRRAKDVKEQLKRIFKNLDLPIRSCHGNVDLIRKTLVSGFFRNAAKRDPQVGYKTIVDE 1015 Query: 650 ARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 SI P S LF K +V+ LV TS+ + ID +W+ Sbjct: 1016 TAVSIHPSSCLFGKECDYVIYHSLVLTSKEYMSQVTLIDRKWLMD 1060 >UniRef50_B5JKC1 ATP-dependent helicase HrpA n=5 Tax=Bacteria RepID=B5JKC1_9BACT Length = 1500 Score = 865 bits (2235), Expect = 0.0, Method: Composition-based stats. Identities = 355/834 (42%), Positives = 502/834 (60%), Gaps = 83/834 (9%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHT 128 +I YP LP+SQ++ +I+ AI+ HQ +++ GETGSGKTTQ+PK+ ++ G G I T Sbjct: 19 QIHYPPELPISQRRDEIVSAIQAHQTIVLTGETGSGKTTQIPKMLLDAGYARSGKKIACT 78 Query: 129 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 188 QPRR+AA +VA R++EEL E G +G K+RF+D S T VK MTDG+LL EI D L+ Sbjct: 79 QPRRVAALSVAKRVSEELGVEFGQEVGAKIRFTDQTSKKTRVKFMTDGMLLTEIHADPLM 138 Query: 189 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIE 248 YD +IIDEAHERSLNIDFLLG+L +L RRPDLKI+ITSATID ++FS F++APIIE Sbjct: 139 RDYDAVIIDEAHERSLNIDFLLGHLNQLRARRPDLKIVITSATIDTDKFSTAFDHAPIIE 198 Query: 249 VSGRTYPVEVRYRPIVEEADDT-ERDQLQAIFDAVDELSQE--SHGDILIFMSGEREIRD 305 VSGR YPV++ Y P+ E +D+ + L+ I ++ + E GDIL F+ E++IR+ Sbjct: 199 VSGRVYPVDIIYAPLDELLEDSGDYTYLEGIAESTQRIQDEFGPSGDILAFLPTEKDIRE 258 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 D L R EI+P + RLSN++Q R+FQ+ R+++LATN+AETSLT+PGI++VID Sbjct: 259 AMDLLEDRFGRRLEIIPCFGRLSNADQQRIFQTSPKRKLILATNIAETSLTIPGIRFVID 318 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ARISRY+ R + +RLPI ISQ+SANQR GRCGRV++GICIRLYSE D+ SR ++ Sbjct: 319 TGLARISRYNPRGRTKRLPITKISQSSANQRSGRCGRVADGICIRLYSEKDYQSRDIYST 378 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT--DEQASA 483 PEI R NLA VIL+M A LG + FPF++ P I G +LL+ELGA+ + Sbjct: 379 PEIQRANLADVILRMLASRLGHVETFPFIDPPTPAAITAGYQLLQELGALKPPRTQNPEP 438 Query: 484 YKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDE 543 LT GRQL++LP DP + RM+LEA +H E ++I SALSIQDPRERPMD++ A+ + Sbjct: 439 KTLTQTGRQLARLPADPTVGRMLLEANRHNVTHEVLVIASALSIQDPRERPMDREAAARQ 498 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 H +F SDFL +N+W L + + LS + R+ C+ ++LNYLR+REW+DIY QL++ Sbjct: 499 AHAQFDHPHSDFLTLLNIWEALHDNFEKLSQSRLRKFCKKNFLNYLRIREWRDIYQQLQR 558 Query: 604 VVKE-------------------------------------------------LGIPVNS 614 + + +P+ Sbjct: 559 SLPKGRSELAREHTTQSPKPTGSKSHLLGEADLTKSRRNPPTTKSNSPLTPHSSPLPIER 618 Query: 615 EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF------------- 661 A Y IH LLTGLLS+IG + + Y + N + IFPGS LF Sbjct: 619 ASARYESIHACLLTGLLSNIGRR-EETNLYRSSANRKPLIFPGSALFIRQARNKKTGKRK 677 Query: 662 ----------KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWER 711 KK P+W++ E+VETSRL+ R A IDP W+ V H++ +YS+P + Sbjct: 678 DPGTESGPKKKKSPEWILSGEIVETSRLYARTVASIDPTWILDVGSHIVTHSYSDPDFLP 737 Query: 712 AQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRH---AFFRE 768 QG V+A E + ++GL I ++V+Y ++DPA E+FIR AL+ D++ F Sbjct: 738 DQGRVVARESIRIHGLEI-QNKQVSYLKVDPAKATEIFIREALLNEDYEAPANWTTFLEP 796 Query: 769 NLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSR 822 N +L + ++ + + +E ++FY +R+ + V S + K + Sbjct: 797 NRRLISRIQNAQTVISVAHWMGVEEAAYQFYKKRLQNQVASNADLNRLLKSLHH 850 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 115/547 (21%), Positives = 205/547 (37%), Gaps = 68/547 (12%) Query: 808 ISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEP 867 S++ F+S +++ + LL ++S L + +P N L + YQ++ Sbjct: 912 SSSKKFES-IREIRGQQSPLLLMQESDLTSSETASVDLSLFPETIQLENSALPIEYQYKA 970 Query: 868 GADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEA 927 G DGVT+ +P V ++ +W IPG + AL+K+LPK +R +P A+ Sbjct: 971 GHANDGVTLKLPYAKAKSVNDALLDWLIPGHLEPKIHALLKALPKQIRARLIPLAETAKT 1030 Query: 928 FLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGR 987 ++P L SL+ L++ + DW +PDHL+ + D K + + R Sbjct: 1031 IAADIRPTGDTLTTSLQHHLQKTYSIETYASDWDDTVIPDHLRARVEIHDKTGKPIAQAR 1090 Query: 988 SLQDLKDALKGKVQE----------TLSAVADDGIEQS--------------------GL 1017 L L + + +L A E+ L Sbjct: 1091 DAATLHQKLAEQERALSEAATNDTTSLWQKARQTHERQIHSISDLRQVLSATDNRTEAPL 1150 Query: 1018 HIWSFGQLPESYEQ----KRGNYKVKAWPALVDERDSVA---------------IKLFDN 1058 S L Y + A+PAL S++ I LF Sbjct: 1151 PSQSNSPLTTHYSLLLIGCPNGIPLYAYPALRSSPISISTTQNPEPSTQHPEIHISLFRT 1210 Query: 1059 PLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVD 1118 P E + G+ LL + + ++ L + +++G P+ + +L +D + Sbjct: 1211 PEEATASNHAGISALLEHELRRELAWIRTDLKDVSRVGPVAIPFRPIADLKEDVYEH-IR 1269 Query: 1119 KLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTM 1178 + + + E A E+ + Q++ IL + V + Sbjct: 1270 QTLRIHDLDTLDPEALHAARERAHERSKGILYKTVDQLKAILEKRQAL------IVQPPI 1323 Query: 1179 ALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVE 1238 A + A + L+ F+ L YL I R + A +P RD + +++ Sbjct: 1324 AKAYA---ADIDRLLPPDFLRHTPNHILPRIPVYLDTIAHRAKTAAQNPTRDAQRQTQLD 1380 Query: 1239 NVQQAWQQWINK--------LPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKR 1290 + +Q Q L + + + ++R+MIEE VS FAQ LGT +PIS K+ Sbjct: 1381 HYRQRLTQLHAGAGSIHHSPLTTHQSANSSIAKLRFMIEEFAVSLFAQHLGTAHPISPKK 1440 Query: 1291 ILQAMEQ 1297 + QA + Sbjct: 1441 LDQAFAE 1447 >UniRef50_Q54NJ4 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 n=19 Tax=Eukaryota RepID=DHX15_DICDI Length = 727 Score = 861 bits (2226), Expect = 0.0, Method: Composition-based stats. Identities = 223/659 (33%), Positives = 369/659 (55%), Gaps = 29/659 (4%) Query: 58 AGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 K + + LPV ++K+D ++ I+++QVVI+ GETGSGKTTQ+P+ ++ Sbjct: 58 PKKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDA 117 Query: 118 GRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 G G +G TQPRR+AA +VA R++EE+ E G +GY +RF + S T +K +TDG Sbjct: 118 GLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDG 177 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 +LL E D L +YD II+DEAHER+L+ D L G +K++L RR DLK+I+ SAT++ + Sbjct: 178 MLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGK 237 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILI 295 F ++F NAP+I+V GR +PVE+ Y ++ +D L++ V ++ E GDIL+ Sbjct: 238 FQKYFENAPLIKVPGRLHPVEIFY------TEEAAKDYLESAVRTVIDIHTNEGTGDILV 291 Query: 296 FMSGEREIRDTADAL----NKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVA 351 F++GE EI DT + + L + LPLY+ L +Q+++F + R+ +++TN+A Sbjct: 292 FLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKERKCIVSTNIA 351 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLT+ GI +V+DPG ++ Y+ R++V+ L + PIS+ASANQR GR GR G C RL Sbjct: 352 ETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRL 411 Query: 412 YSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 Y+E F + T PEILR+NLASV+LQ+ LG+ D+ F F++ P + + +L Sbjct: 412 YTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLH 471 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP 530 LGA+ + Q LT +G +S+ P+DP+L++M++ + + C E + I + LS + Sbjct: 472 YLGALDDEGQ-----LTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNC 526 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RP D + +D + F + D L +N+++ + C ++LN+ Sbjct: 527 FMRPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSF------KKNGEDPTWCYDNFLNHRA 580 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMKDADKQEYTG 646 +++ + +QL +++ +P+ S Y I + G + + +T Sbjct: 581 IKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTL 640 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 P +GL ++ P++ + E V TS + R + +W+ +A K+ Sbjct: 641 GDEQSVIFHPSTGLTRR-PEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSF 698 >UniRef50_C0SAG2 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 n=2 Tax=Eukaryota RepID=C0SAG2_PARBP Length = 1093 Score = 860 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 242/720 (33%), Positives = 377/720 (52%), Gaps = 35/720 (4%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKN--PDAQQAIFQEMAKEIDQAAGKV- 61 + + ++ S L R+ S +KV + + + KE K+ Sbjct: 370 ENEQTAKAKAQISSRSLLMRVIMSMCFDDAQKVNFIMDSKLEGDRKPLTKEQQLFQQKLN 429 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 + A +LP+ + +++I++A+ DHQ++I+ GETGSGKTTQ+P+ E G Sbjct: 430 AAEQKAASIEETRKSLPIYRFREEIIQAVADHQIIIIVGETGSGKTTQIPQYLHEAGYTK 489 Query: 122 KG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 G IG TQPRR+AA +VA R+AEE+ + G +GY +RF D SD T++K MTDG+LL Sbjct: 490 GGMKIGCTQPRRVAAMSVAARVAEEMGVKVGNEVGYAIRFEDATSDKTVLKYMTDGMLLR 549 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E+ + L Y ++IDEAHER+++ D G LK++ RPDLK++I+SATID ++F ++ Sbjct: 550 ELLTEPDLGAYSVLMIDEAHERTVSTDIACGLLKDIAKARPDLKLLISSATIDAQKFQKY 609 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSG 299 F++API + GR YPV++ Y E + L A V + + GDIL+F++G Sbjct: 610 FDDAPIFNIPGRRYPVDIHY------TLQPEANYLAAAITTVFHIHISQGKGDILVFLTG 663 Query: 300 EREIRDTADALNK------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVA 351 + EI ++ + + I P+YA L + Q ++F+ R++VLATN+A Sbjct: 664 QEEIEAAEQSIQETARKLGSKIPELIICPIYANLPSELQAKIFEPTPPGARKVVLATNIA 723 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLT+ GI YVIDPG + + ++ RT ++ L + P S+ASA QR GR GRV G C RL Sbjct: 724 ETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASAGQRAGRAGRVGPGKCFRL 783 Query: 412 YSEDD-FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 Y++ + E T PEI RTNL V+L + +LG+ + F F++ P + + L Sbjct: 784 YTKWAYYNELEENTTPEIQRTNLNGVVLMLKSLGIDQLLDFDFMDPPPAETLIRALEQLY 843 Query: 471 ELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL-SIQD 529 LGA+ LT +GRQ+++ P DP LA+ +L A K+GCV E + I + L Sbjct: 844 ALGALNDHGD-----LTKVGRQMAEFPTDPMLAKAILAADKYGCVEEVLSIIAMLGEASS 898 Query: 530 PRERPMDKQQASDEKHRRFHDKE-SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 RP DK+ +D RF K+ D + +N+WN + S+ R ++L Sbjct: 899 LFFRPKDKKIHADSARARFTIKDGGDHFSLLNVWNQWVD------SDFSYVWARENFLQQ 952 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEP-AEYREIHIALLTGLLSHIGMKDADK-QEYTG 646 + +D+ QL ++ + + + S + I A+ G + T Sbjct: 953 RSLTRARDVRDQLAKLCDRVEVTITSSGSSNLVPIQKAITAGFFPNAARLQRGGDSYRTV 1012 Query: 647 ARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSE 706 + P S LF+ PKWV+ ELV TS+ + R + PEW+ VA H K+ E Sbjct: 1013 KNGQTVYLHPSSTLFEVNPKWVIYYELVLTSKEYMRSNMPLQPEWLVEVAPHYHKKKDLE 1072 >UniRef50_O45244 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 n=4 Tax=Chromadorea RepID=DHX16_CAEEL Length = 1008 Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats. Identities = 229/718 (31%), Positives = 374/718 (52%), Gaps = 35/718 (4%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 L + L +D +R ++ + I ++ + + Sbjct: 299 EEEQLMASMLHLGAKDA----KRKEQEFELLLDEKVDFIQALQMPGTNEEVVETEAEKKK 354 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IG 126 +LPV + +EA+++HQV+I+ GETGSGKTTQLP+ E G G IG Sbjct: 355 MSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIG 414 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AA +VA R+A+E+ + G +GY +RF D S+ T++K MTDG+LL E + Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP 474 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L Y ++IDEAHER+L+ D L G +K++ R DLK++I+SAT+D E+FS F++API Sbjct: 475 DLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPI 534 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES--HGDILIFMSGEREIR 304 + GR +PV++ Y E D + A + ++ GDIL+F++G+ EI Sbjct: 535 FRIPGRRFPVDIYY------TQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIE 588 Query: 305 DTADALNKL------NLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLATNVAETSLT 356 +AL + ++ LP+YA L + Q ++F+ R++VLATN+AETS+T Sbjct: 589 TVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVT 648 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + GI YVIDPG ++ + + R+ V+ L + IS+A+ANQR GR GR G C RLY+ Sbjct: 649 IDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWA 708 Query: 417 F-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 + E PEI RTNL +V+L + +LG+ D+ F F++ P + + + L LGA+ Sbjct: 709 YKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGAL 768 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ-DPRERP 534 +LT LGR++++ P DP +++M++ ++K+ C E + I + LS RP Sbjct: 769 N-----HRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRP 823 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 + +D + F D + +N++N E S+ +R C +Y+ + ++ Sbjct: 824 KAQVIHADSARKGFWSPAGDHITLMNVYNKWQE------SSFSQRWCVENYVQHRTMKRA 877 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 +D+ QL +++ + I S + +I A+ G ++ D T Sbjct: 878 RDVRDQLVGLLERVEIETKSS-TDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHP 936 Query: 655 FPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERA 712 P S LF++ P+WV+ ELV TS+ + R + I+ W+ VA H K E + Sbjct: 937 HPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKK 994 >UniRef50_C9RLX0 Helicase-associated domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLX0_FIBSS Length = 1348 Score = 856 bits (2212), Expect = 0.0, Method: Composition-based stats. Identities = 344/990 (34%), Positives = 534/990 (53%), Gaps = 98/990 (9%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG----------- 123 LPV + +++ + + HQV+IV +TGSGK+TQLPK +E Sbjct: 11 PELPVVEHREEFFDLLEKHQVIIVKADTGSGKSTQLPKFLLEWFIAKTRDEGRETREAAA 70 Query: 124 -------------------LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHV 164 IG T+PRRLAA ++A+R+ EELK E + K+RF + Sbjct: 71 HTSKGEARAHTSEHEVRLFKIGVTEPRRLAAISIADRLREELKDE--ELVSTKIRFWEQG 128 Query: 165 SDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLK 224 ++ +K+MTDGILL E ++DRL QY+ I+IDEAHERSLNID LLG K +L RRPD K Sbjct: 129 TNEAPIKVMTDGILLQEFRKDRLFRQYNAIMIDEAHERSLNIDILLGIFKTVLSRRPDFK 188 Query: 225 IIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD--------QLQ 276 +I+ SAT+D + F ++N+ ++E GRTYPV+V Y + RD ++ Sbjct: 189 LIVASATLDAKLFEEFYDNSCVMEAEGRTYPVDVEYYFSDYGSASALRDISGKGDSGLIE 248 Query: 277 AIFDAVDELSQESHGDILIFMSGEREIRDTADAL-NKLNLRHTEILPLYARLSNSEQNRV 335 DA+ +L +L F+ ER+I+D L ++L+ ++LPLY R+S EQ R+ Sbjct: 249 EARDAILDLETRHRDHLLCFLPTERDIQDLMGELAHELDAATFDVLPLYGRMSPDEQRRI 308 Query: 336 FQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 F+ R+VLATN+AETSLT+PGI YV+D G ARISRY+ + ++Q LP+E IS+ASA Q Sbjct: 309 FKHTGKTRVVLATNIAETSLTIPGIAYVVDTGMARISRYNAQARIQGLPVEEISKASARQ 368 Query: 396 RKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 R GR GRV G+CIRLYS ++F R EFT+PEI R+NLA+V+LQ+ +LGL ++ FPF++ Sbjct: 369 RTGRAGRVKPGVCIRLYSPENFEKRDEFTEPEIRRSNLANVVLQLRSLGL-ELENFPFLQ 427 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 +P + + L ELGA+T D S+ +T LGR +++LP+D L+ ++L A+ G + Sbjct: 428 SPPHSAFRGAYKTLFELGALTADN--SSGYVTKLGRDMTRLPMDVSLSAVLLRARDLGVL 485 Query: 516 REAMIITSALSIQDPRERPMD--KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 + A+I+ SALSIQDPR P D ++ + HR+F +SDFL +V++WN S Sbjct: 486 QPALIVCSALSIQDPRVVPNDEPERTRIRQLHRKFCGHKSDFLVYVSMWNAFCTDWDGKS 545 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY---REIHIALLTGL 630 N R+ C + +++LR+REW D+Y Q +++ E+ P + +HIALL+G Sbjct: 546 WNKLRKFCDKNSMHFLRLREWVDLYEQFSRIL-EVKFENKVCPFDSFHRDNLHIALLSGF 604 Query: 631 LSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPE 690 L I +D + Y +FPGS L+ K +W+ AE+ ETSR + AA I PE Sbjct: 605 LGGIAHRDIENGCYRLVSGRETHVFPGSDLYAKSVEWLFSAEVRETSRTFLTKAAEIKPE 664 Query: 691 WVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI 750 W+ VA+ R + EP W + +G V A E+V+ GL I +V+Y++++P C ++F Sbjct: 665 WILQVAEPFCTRRWFEPTWNKERGFVEAVEEVSFRGLVISRGHRVDYARVNPEDCAQIFW 724 Query: 751 RHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISA 810 R A+V G+ F + N + + LE + R+ + ++ L E+Y RI+ +V S Sbjct: 725 REAVVMGEVARPFDFMKHNDHVVENLHALEARKRQFGLAPSEDALVEYY-TRIAGNVNSI 783 Query: 811 RHF--------DSWWKKVSRETPDLLNFE------------------KSMLIKEGAEKIS 844 + D + K + DLL+ L K+ + Sbjct: 784 KTLKSYIYEHTDQFLKFDEKYWLDLLDERTLAGSLQTKDERGFGTKLSDFLPKQSQTSKA 843 Query: 845 KLDYP---------NFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQI 895 + P + G + F+ D DG+T+ +P LL ++ + F I Sbjct: 844 RSADPIAPTLGGSIEHFRIGERVVTGEMVFDATRDCDGITLSLPYDLLTEISPAKFAMSI 903 Query: 896 PGLRRELVIALIKSLPKPVRRNFVPAPNYA--EAFLGRVK--PLELPLL---DSLE--RE 946 R ++ ++I+ +PK V + + A A + F + P + PLL + L +E Sbjct: 904 QQWREWMIESVIREMPKSV-KKLLEAKRTAIDDEFFAALDNFPHKAPLLLLYEVLSNTKE 962 Query: 947 LRR-MTGVTVDREDWHWDQVPDHLKITFRV 975 +R G ++D + D+ +HL++ V Sbjct: 963 IRSGANGASIDVPTVNPDK-ENHLRLHLVV 991 >UniRef50_C4Y9K0 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y9K0_CLAL4 Length = 1131 Score = 854 bits (2208), Expect = 0.0, Method: Composition-based stats. Identities = 222/696 (31%), Positives = 365/696 (52%), Gaps = 33/696 (4%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY-PDNLPVSQKKQDILEAIRDHQ 94 + KN D +Q +E +K +QA + ++ ++ LPV ++ +L A+RD+Q Sbjct: 424 EEKNKDKEQNKDKEQSKGKEQAPYSKSRKNVSKSDLAQSRKRLPVYAMREQLLSAVRDNQ 483 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIG-HTQPRRLAARTVANRIAEELKTEPGGC 153 VIV GETGSGKTTQ+ + E I TQPRR+AA +VA R+A+E+ G Sbjct: 484 FVIVVGETGSGKTTQIVQYLYEENFHRGDKIIACTQPRRVAAESVAKRVAQEVGCPLGQE 543 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY +RF D S T +K MTDG+L E D + +Y +++DEAHER++ D L L Sbjct: 544 VGYTIRFDDRTSPATRIKYMTDGMLQREALLDPQMSKYAVVMLDEAHERTVATDVLFALL 603 Query: 214 KELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 K+ PDL+++ TSAT+D ++FSR+F P++ V GRT+PVE+ Y + E D Sbjct: 604 KKAARANPDLRVLATSATLDADKFSRYFGGCPVLHVPGRTFPVEIMYS------REPEPD 657 Query: 274 QLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN------KLNLRHTEILPLYAR 326 + A D V ++ E GDIL+F++G+ EI +AL + +LP Y+ Sbjct: 658 YVAAALDCVMQIHVAEDSGDILVFLTGQDEIDTCCEALEARIKTLGRAVPELLVLPAYSA 717 Query: 327 LSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 384 L +Q R+F+ R++VLATN+AETS+T+ GI+YV+DPG +++ Y R + L Sbjct: 718 LPPDQQARIFEPAPPGARKVVLATNIAETSITIDGIRYVVDPGFVKLNAYDPRLGMDSLV 777 Query: 385 IEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTAL 443 + PISQA ANQR GR GR + G C RLY+E+ F T PEI R NL IL + A+ Sbjct: 778 VSPISQAQANQRSGRAGRTAPGKCFRLYTEEAFRTEMRPNTVPEIQRQNLEHTILMLKAM 837 Query: 444 GLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLA 503 G+ D+ F F++ P ++ L L A+ + LT +GR+++ P++P LA Sbjct: 838 GIDDVLRFEFMDPPPAPTTVQALKELYVLDALDENG-----HLTSMGRRMADFPMEPALA 892 Query: 504 RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN 563 + VL + C + + + + LS+Q+ RP DKQ A+D++ +RFH D L +N++ Sbjct: 893 KTVLASVDLSCASDVLSVVAMLSVQNVFYRPKDKQAAADQRKQRFHSVHGDHLTLLNVFR 952 Query: 564 YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIH 623 + S R C +++ + ++ QL ++ + V+ ++ + Sbjct: 953 GWEQ------SGRSRSWCAENFVQERAMWRAFEVRKQLAAIMVRFRLDVH--GSDASAVR 1004 Query: 624 IALLTGLLSHIGMKDADKQEY-TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 A G + +D + + T + P S ++ K +V+ L+ T++ + Sbjct: 1005 KAFCAGYFRNSAKRDPHEGIFTTLVDQTPVHLHPSSAVYGKSVDYVIYHTLLLTTKEYMH 1064 Query: 683 IAARIDPEWVEPVAQHLIKRTYS-EPHWERAQGAVM 717 + +DP+W+ +A + + P R + ++ Sbjct: 1065 CVSVVDPKWLVELAPRFFQPSDPNNPSERRKRQKIV 1100 >UniRef50_Q5CYX6 Prp16p pre-mRNA splicing factor. HrpA family SFII helicase n=2 Tax=Cryptosporidium RepID=Q5CYX6_CRYPV Length = 1042 Score = 854 bits (2207), Expect = 0.0, Method: Composition-based stats. Identities = 230/736 (31%), Positives = 386/736 (52%), Gaps = 52/736 (7%) Query: 6 KLTFTALQ-QRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + F LQ ++ +L+ D+ + + + ++ ++ + + + Sbjct: 247 RQRFWELQNSKIGALISSDKSHSIEENSIYSQDGPKEGKYDNSKQSFGDLFRKSKDISEN 306 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 ++ + + +LPV + + +++ I +H VV+V GETGSGKTTQL + E G +G+ Sbjct: 307 DSRQRMLMTRRSLPVYKVRDSLIKLIGEHMVVVVVGETGSGKTTQLTQYLHEFGYSKRGI 366 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IG TQPRR+AA +VA R+A+E+ + G +GY +RF D S +T++K MTDG+L+ E Sbjct: 367 IGCTQPRRVAAVSVAQRVADEMNVDLGKEVGYTIRFEDFTSKSTVIKYMTDGVLMRESLS 426 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 D L +Y II+DEAHERSLN D L G + +L R D ++I+TSAT+D E+ S F NA Sbjct: 427 DPELERYSAIIMDEAHERSLNTDVLFGIFRSVLSNRRDFRLIVTSATMDSEKLSSFFGNA 486 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-------------- 290 PI + GRT+PVE+ Y D + A ++ + Sbjct: 487 PIFNIPGRTFPVEIEYL------RYFPDDYIDAAVRQCLKIHCTNPLSLLENKDNSDEKQ 540 Query: 291 ---GDILIFMSGEREIRDTADALNKLNLR-------HTEILPLYARLSNSEQNRVFQSHS 340 GDILIFM+G+ +I T +++ ILP+Y++L + Q ++F+ Sbjct: 541 KKDGDILIFMTGQEDIEATCILISEKLENLMIDGADPLMILPIYSQLPSDLQAKIFKPSP 600 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 R++++ATN+AETSLT+ GI+YVID G ++ Y+ + + L I PISQA+A QR GR Sbjct: 601 YRKVIVATNIAETSLTLDGIRYVIDCGLCKVKVYNPKIGMDSLQITPISQANALQRSGRA 660 Query: 401 GRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459 GRVS GIC R+Y+E FL+ + PEI RTNL++V+L + +LG D+ +FPF++ P Sbjct: 661 GRVSSGICYRMYTEQTFLADMLPNSVPEIQRTNLSNVVLLLKSLGSEDVFSFPFIDPPSS 720 Query: 460 RNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAM 519 +I + L LGA+ + LT LGRQ+++ P+DP L++++L A K C+ EA+ Sbjct: 721 SSISTSLYQLWSLGALDDNG-----SLTDLGRQMARFPLDPPLSKVLLTANKLDCLIEAI 775 Query: 520 IITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR 579 ++ + L++ RP D+ + +D +F ESD L +N++ + R Sbjct: 776 VVVAMLTVPSIFYRPKDRLEEADASREKFSIPESDHLTLLNIFIQWKRHGSNV------R 829 Query: 580 LCRTDYLNYLRVREWQDIYTQLRQVVKELG-------IPVNSEPAEYREIHIALLTGLLS 632 +L+ + ++++ Q+ ++ + I P + + A +G Sbjct: 830 WSERHFLHQKALMRVEEVFNQIVEIYSNIMSMETMPRIDWKPNPLCWDNLRKAFCSGYFH 889 Query: 633 HIGMKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPE 690 + A Q + + I P S LF P +++ E++ TS+ + + I+PE Sbjct: 890 NSAKIRAIGQYVNLSTSVPTYIHPSSSLFLSGVNPDYLIYHEVIITSKEYMNAVSAIEPE 949 Query: 691 WVEPVAQHLIKRTYSE 706 W+ A H+ K ++ Sbjct: 950 WLNFYAPHIFKLNIND 965 >UniRef50_P53131 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 n=167 Tax=Eukaryota RepID=PRP43_YEAST Length = 767 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 236/728 (32%), Positives = 376/728 (51%), Gaps = 40/728 (5%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 EQ L ++ + + K ++ Q++ Sbjct: 21 EQAAEIAEELSKQHP--LPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGRE 78 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM--ELGRG 120 + LPV ++ + L+ +++Q+++ GETGSGKTTQ+P+ + E+ Sbjct: 79 FTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHL 138 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 + TQPRR+AA +VA R+AEE+ + G +GY +RF + S+ T++K MTDG+LL Sbjct: 139 ENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLR 198 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E +D L +Y II+DEAHER+L D L+G LK+++ RRPDLKIII SAT+D E+F R+ Sbjct: 199 EAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRY 258 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSG 299 FN+AP++ V GRTYPVE+ Y P + +RD L + V ++ E GDIL+F++G Sbjct: 259 FNDAPLLAVPGRTYPVELYYTP------EFQRDYLDSAIRTVLQIHATEEAGDILLFLTG 312 Query: 300 EREIRDTADAL--------NKLNLRHTEILPLYARLSNSEQNRVFQS-------HSGRRI 344 E EI D + + + PLY L +Q R+F+ GR++ Sbjct: 313 EDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKV 372 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 V++TN+AETSLT+ GI YV+DPG ++ Y+ R +V+ L + PIS+ASA QR GR GR Sbjct: 373 VISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTR 432 Query: 405 EGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 G C RLY+E+ F E + PEILR+NL+S +L++ LG+ D+ F F++ P + Sbjct: 433 PGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMM 492 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 + L L + + LTPLGR SQ P+DP LA M++ + + C +E + I + Sbjct: 493 RALEELNYLACLDDEGN-----LTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVA 547 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 LS+ + RP ++ +D+ F + D + +N+++ + + CR Sbjct: 548 MLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYG--IHKWCRD 605 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNS----EPAEYREIHIALLTGLLSHIGMKDA 639 YLNY + +I +QL +++ + +N+ P + I AL +G + K + Sbjct: 606 HYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRS 665 Query: 640 D-KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 K T N I P + L +WV+ E V TS+ + R + PEW+ +A Sbjct: 666 GAKGYITVKDNQDVLIHPSTVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPA 724 Query: 699 LIKRTYSE 706 + + Sbjct: 725 YYDLSNFQ 732 >UniRef50_Q10752 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 n=162 Tax=Eukaryota RepID=CDC28_SCHPO Length = 1055 Score = 851 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 234/718 (32%), Positives = 381/718 (53%), Gaps = 36/718 (5%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLR---FSRRLHGVKKVKNPDAQQAIFQEMAKEIDQA 57 M ++ + A Q+++ +L D+ + ++ + +++ E Sbjct: 341 MGAAEQQRWEA--QQINKALLFDQNEWLPPGEKQFDFVFDESQQIDFLLDTKLSAENPVD 398 Query: 58 AGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 K+ + + + +LPV Q K D+L+AI ++QV+++ ETGSGKTTQLP+ E Sbjct: 399 TDKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEA 458 Query: 118 GRGI-KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 G I TQPRR+AA +VA R+A+E+ G +GY +RF + S+ T++K +TDG Sbjct: 459 GYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDG 518 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 +LL E + L Y IIIDEAHER+L+ D L G +K++ RPDLK++I+SATID E+ Sbjct: 519 MLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEK 578 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILI 295 FS +F+ AP+ V GR YPV++ Y P E + +QA + ++ GDIL+ Sbjct: 579 FSAYFDEAPVFYVPGRRYPVDIYYTP------QPEANYIQAAITTILQIHTTQPAGDILV 632 Query: 296 FMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLA 347 F++G+ EI ++ + +L + P+YA L + Q ++F R++VLA Sbjct: 633 FLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLA 692 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETS+T+ G+ +VID G + + Y+ RT ++ L P S+ASA+QR GR GRV G Sbjct: 693 TNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGK 752 Query: 408 CIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RLY+ + + T PEI RTNL +++L + +LG+ ++ F F++AP + + Sbjct: 753 CFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSL 812 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL- 525 LL LGA+ + +LT LGRQ+++ P DP L++ ++ + K+GCV E + I S L Sbjct: 813 ELLYALGALN-----NRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLG 867 Query: 526 SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY 585 RP DK +D+ F D L +++WN + ++ R ++ Sbjct: 868 EASSLFYRPKDKIMEADKARANFTQPGGDHLTLLHIWNEWVD------TDFSYNWARENF 921 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY-REIHIALLTGLLSHIGMKDADK-QE 643 L Y + +D+ QL + + + I + + +E I A+ G S+ D Sbjct: 922 LQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSY 981 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 T N I P S + +K PK ++ ELV T++ + R I PEW+ ++ H K Sbjct: 982 RTVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFK 1039 >UniRef50_Q7XIR8 Os07g0508000 protein n=4 Tax=Embryophyta RepID=Q7XIR8_ORYSJ Length = 1280 Score = 846 bits (2186), Expect = 0.0, Method: Composition-based stats. Identities = 225/724 (31%), Positives = 376/724 (51%), Gaps = 33/724 (4%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 M + ++ + +L +++ ++ + + ++ + A Sbjct: 507 MNKSRQRFWELAGSKLGNILGVEKTAEQVDADTATVGDQGEIDFKEEAKFSQHMKVKAEA 566 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 V ++ LP+ + D+L+ +R++QVV+V GETGSGKTTQL + E G Sbjct: 567 VSDFAKSKSLSQQRQYLPIFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDGYT 626 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 G++G TQPRR+AA +VA R++EE++TE G +GY +RF D S NT++K MTDG+LL Sbjct: 627 TTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLR 686 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E +D L +Y I++DEAHERSLN D L G LK+++ RR D K+I+TSAT++ ++FS+ Sbjct: 687 ETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKF 746 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSG 299 F P+ + GRT+PV + + D ++A + GDILIFM+G Sbjct: 747 FGGVPVFHIPGRTFPVNIMFS------KTPCEDYVEAAVKQAMTIHITSGPGDILIFMTG 800 Query: 300 EREIRDTADALNKL----------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLA 347 + EI T AL + + ILP+Y++L Q ++FQ R+ ++A Sbjct: 801 QEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVA 860 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETSLTV GI YVID G ++ Y+ R + L + P+S+A+A+QR GR GR G Sbjct: 861 TNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGT 920 Query: 408 CIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RL++E + + PEI RTNL +V+L + +L + ++ F F++ P + NI + + Sbjct: 921 CYRLFTESAYQNEMLPNPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQENILNSM 980 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 L LGA+ + LT +G ++ + P+DP LA+M+L ++ C+ E + I S LS Sbjct: 981 YQLWVLGALN-----NVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLS 1035 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 + RP D+ + SD +F ESD L +N++ S+ C +L Sbjct: 1036 VPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQW------KSNQYRGDWCNDHFL 1089 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 + +R+ +++ +QL ++K L IP+ S E+ + A+ + + + Sbjct: 1090 HVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARLKGVGEYVNC 1149 Query: 647 ARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 + P S L+ P +V+ ELV T++ + + +DP+W+ + Sbjct: 1150 RNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKE 1209 Query: 705 SEPH 708 ++ Sbjct: 1210 TDTS 1213 >UniRef50_O60231 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=75 Tax=Eukaryota RepID=DHX16_HUMAN Length = 1041 Score = 846 bits (2186), Expect = 0.0, Method: Composition-based stats. Identities = 237/719 (32%), Positives = 378/719 (52%), Gaps = 31/719 (4%) Query: 3 EQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVL 62 EQ++ L RD + V + + Q E A Sbjct: 325 EQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDEEPSAPPTST 384 Query: 63 LREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK 122 + +LPV ++++L AI +HQV+I+ GETGSGKTTQ+P+ E G K Sbjct: 385 QAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNK 444 Query: 123 G-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 G I TQPRR+AA +VA R+A E+ + G +GY +RF D S+ T+++ MTDG+LL E Sbjct: 445 GMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLRE 504 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 + L Y +++DEAHER+L+ D L G +K++ RP+LK+++ SAT+D RFS F Sbjct: 505 FLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFF 564 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGE 300 ++AP+ + GR +PV++ Y E D L+A +V ++ + GDIL+F++G+ Sbjct: 565 DDAPVFRIPGRRFPVDIFY------TKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQ 618 Query: 301 REIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAE 352 EI + L R +LP+YA L + Q R+FQ R++V+ATN+AE Sbjct: 619 EEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAE 678 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TSLT+ GI YV+DPG + Y+ RT ++ L + P S+ASANQR GR GRV+ G C RLY Sbjct: 679 TSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLY 738 Query: 413 SEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 + + E T PEI RT+L +V+L + +LG+ D+ F F++ P + + L Sbjct: 739 TAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYA 798 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-P 530 LGA+ +LT GR++++LPVDP L++M+L ++K+ C E + + + LS+ + Sbjct: 799 LGALN-----HLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSI 853 Query: 531 RERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RP DK +D F D L +N++ E S + C +++ + Sbjct: 854 FYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAE------SGYSSQWCYENFVQFRS 907 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 +R +D+ QL +++ + + ++S +Y + A+ G H T + Sbjct: 908 MRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQ 966 Query: 651 RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK-RTYSEPH 708 I P S LF++ P+W++ ELV T++ + R I+ W+ VA H K + +PH Sbjct: 967 TVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPH 1025 >UniRef50_Q9P774 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 n=1 Tax=Schizosaccharomyces pombe RepID=PRP16_SCHPO Length = 1173 Score = 845 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 225/699 (32%), Positives = 363/699 (51%), Gaps = 35/699 (5%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 ++A +Q+ K + + LP ++ +L IRD+Q Sbjct: 450 DSNDEDAKAGTTPVKVAGRSEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQ 509 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 V+IV GETGSGKTTQL + E G G+IG TQPRR+AA +VA R++EE+ G + Sbjct: 510 VLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTV 569 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D +T++K MTDG+LL E L +Y II+DEAHERSLN D L+G LK Sbjct: 570 GYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLK 629 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 ++L RR D+K+++TSAT++ ++FS F AP + GRTYPV++ + A D Sbjct: 630 KVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMF------AKAPCSDY 683 Query: 275 LQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLS 328 ++A V ++ + GDIL+FM+G+ +I T + + + ILP+Y+++ Sbjct: 684 VEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMP 743 Query: 329 NSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 Q ++F S R++V+ATN+AETSLTV GI YV+D G ++ Y+ + + L + Sbjct: 744 ADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVT 803 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGL 445 PISQA+ANQR GR GR GI RLY+E + E T PEI RTNL++ +L + +LG+ Sbjct: 804 PISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGV 863 Query: 446 GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARM 505 +I+ F F++ P + + L LGA+ + KLT LG+++S P+DP L+++ Sbjct: 864 EEISDFDFMDRPPNDTLMASLYELWTLGALD-----NFGKLTTLGKKMSLFPMDPSLSKL 918 Query: 506 VLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYL 565 ++ A+ + C E + I S LS+ RP ++ + SD +F+ ESD L +N++ + Sbjct: 919 IIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHW 978 Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIA 625 + C +L+ ++ +DI QL +++ + I + S +++ + Sbjct: 979 QR------NGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLESV-SDWDIVRRV 1031 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRI 683 L + + + S L+ P +V+ ELV TS+ + I Sbjct: 1032 LCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNI 1091 Query: 684 AARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKV 722 +DP W+ ER + + ++V Sbjct: 1092 VTSVDPYWLAEFGGVYYSVK------ERFRNETESYDRV 1124 >UniRef50_D1H6K3 Whole genome shotgun sequence of line PN40024, scaffold_137.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H6K3_VITVI Length = 1408 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 221/663 (33%), Positives = 351/663 (52%), Gaps = 34/663 (5%) Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 + LP++ ++ ++E ++ + +I+ GETGSGKTTQLP+ + G G Sbjct: 755 NRKQRLEQQRKALPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLPQFLLNGGFCHDGK 814 Query: 125 IG-HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 I TQPRR+AA TVA R+AEE E G +GY +RF D S +T +K MTDG+LL E Sbjct: 815 IIGITQPRRVAAVTVAKRVAEECGVELGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREAL 874 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR------PDLKIIITSATIDPERF 237 D L +Y II+DEAHER+++ D LLG LK + R P LK+II SA++D F Sbjct: 875 LDPFLSRYSVIIVDEAHERTIHTDVLLGLLKNVQNARCQGVKFPSLKLIIMSASLDARGF 934 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIF 296 S +F A + + GR +PV++ Y E D + A + ++ +E GDIL+F Sbjct: 935 SEYFGGARSVYIQGRQFPVDIFY------THHAEPDYVDAALITIFQIHLEEGPGDILVF 988 Query: 297 MSGEREIRDTADALNKLNLR------HTEILPLYARLSNSEQNRVF--QSHSGRRIVLAT 348 ++G+ EI + + + +P+++ L + +Q + F R+++LAT Sbjct: 989 LTGQEEIESVERLVQERLRQLPEGSQKLLTVPIFSSLPSEQQMKAFMPAPAGFRKVILAT 1048 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETS+T+PGIKYVIDPG + Y+ T ++ L I S+A A QR GR GR G C Sbjct: 1049 NIAETSVTIPGIKYVIDPGVVKARTYNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKC 1108 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RLY E +F + T+PEI R NL++VILQ+ ALG+ DI F F+E P + I + Sbjct: 1109 FRLYPESEFGQLADSTEPEIKRCNLSNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQ 1168 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L LGAIT D + S P+G Q+++LP+DP ++ ++ A + C+ E +I + LS++ Sbjct: 1169 LFLLGAITDDSKLSD----PIGHQMARLPLDPVYSKALILASQFNCLEEMLIAVAMLSVE 1224 Query: 529 DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGE--------QQKALSSNAFRRL 580 P +K + + + F E D + +N++ E K + R+ Sbjct: 1225 SIFYTPREKLEEARTAMKCFSSPEGDHITLINVYRASDEFVEKIKQGNDKEKTEKKLRKW 1284 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAD 640 C+ +++N +R +DI++Q+R+ +++G+ V S + + L + +K + Sbjct: 1285 CKENFINSRSLRHARDIHSQIRRHAEQMGLCVASCGDDMLQFRRCLAASFFLNAALKQPE 1344 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 A I P S LF+ P+ ++ ELV+T+ + R RID W+ +A Sbjct: 1345 GTYRALASGQSVRIHPSSVLFRTKPECIIFNELVQTNHCYIRNITRIDFLWLPELAPQYY 1404 Query: 701 KRT 703 Sbjct: 1405 AVQ 1407 >UniRef50_B6AI28 Pre-mRNA-processing protein 8, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AI28_9CRYT Length = 878 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 228/762 (29%), Positives = 369/762 (48%), Gaps = 79/762 (10%) Query: 2 TEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKV 61 T T + ++DSL L+ S + + + + +E Sbjct: 124 TSAAIQTNRSSSNKVDSLDPNKVLKESTLILPDGSQIDFELLETTLEEGNIYSTTELKCR 183 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 + +LPV + +++IL ++ + ++IV GETGSGKTTQ+P+ E G Sbjct: 184 NFINERQYIDEIRSSLPVIKYREEILSSLEKYPILIVVGETGSGKTTQIPQYLYEAGYAE 243 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 KG I TQPRR+AA +VANR+++E+ G +GY +RF D +++T +K MTDGILL E Sbjct: 244 KGTIACTQPRRVAAMSVANRVSKEMNCRLGSKVGYTIRFEDCTNEDTKIKYMTDGILLRE 303 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP-----------------DLK 224 + L Y ++IDEAHERSL+ D L G +K++ R K Sbjct: 304 FLSNPDLSGYSCLLIDEAHERSLHTDVLFGLVKDVSKFRNFKDDNLSTKSDCEDSTEPFK 363 Query: 225 IIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDE 284 +II+SAT++ E+F ++F+N+PII + GR YPV++ Y E + + A V + Sbjct: 364 LIISSATLEAEKFGKYFDNSPIIYIPGRRYPVDIYY------TKAPEANFIDATVVTVLQ 417 Query: 285 LSQES-----------------------------------HGDILIFMSGEREIRDTADA 309 + GDIL F+ G++EI + + Sbjct: 418 IHLSQLKKSNKTEGIIDNNSTIKSLDNIGMNFSRTRIIPTGGDILCFLPGQQEIEECMEM 477 Query: 310 LNKLN------LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIK 361 LNK + +LP+YA L + +Q ++F R++VLATN+AET+LT+ I Sbjct: 478 LNKKMLGKGKEVPELIVLPIYASLPSEQQAQIFISTPQGARKVVLATNIAETALTIDNIG 537 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-DDFLSR 420 +VID G + + Y+ +T + L P S+A+ANQR GR GRV G C RLY++ ++ Sbjct: 538 FVIDCGFCKQNSYNPKTGLDSLVTIPCSRAAANQRAGRAGRVRPGKCFRLYTKTSFYMEM 597 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 PEI R NL +V+L + +LG+ D+ F F++ P + + LL L A+ Sbjct: 598 EPSNTPEIQRCNLGNVVLMLKSLGIDDLLHFDFMDPPPPETLVKALELLYGLNALDDKGD 657 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQ 539 LT +GR++++LP+DP +++VL +Q++ V E++II S LS+ + RP DK Sbjct: 658 -----LTNIGRKMAELPLDPMYSKVVLASQRYKVVDESIIIVSMLSLGNTVFIRPRDKST 712 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +D + F D L +N++ +S C ++++ ++ +DI Sbjct: 713 QADNIRKSFFRSGGDHLTLLNVYKQWE------NSGESNLWCFENFIHGKSMKRARDIRI 766 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 QL ++++ L I + S P E I ++ G + T I P S Sbjct: 767 QLSELMETLDIEITSNPNEVDGIRKSIAAGFFFQTARINKGGNYSTLRNCHIVDIHPSSS 826 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 LF+ P+ V+ ELV T++ + R I EW+ VA H Sbjct: 827 LFESRPQTVVYTELVHTTKEYMRNITEIKAEWLFEVAPHYYT 868 >UniRef50_B6AHK6 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AHK6_9CRYT Length = 1052 Score = 845 bits (2183), Expect = 0.0, Method: Composition-based stats. Identities = 223/733 (30%), Positives = 368/733 (50%), Gaps = 70/733 (9%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 K E + L + + R LPV K+++L I +H + Sbjct: 267 KSVKQTNTSIYNSEYYYNAEINDNNELYKASYRDMQQVRKTLPVFAMKEELLNLIYEHPI 326 Query: 96 VIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 V+V GETGSGKTTQL + E G G+I TQPRR+AA +VA R++EE+ + G +G Sbjct: 327 VVVVGETGSGKTTQLTQYLYEAGYSNYGIIACTQPRRVAAVSVAKRVSEEMNVKLGTKVG 386 Query: 156 YKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKE 215 Y +RF D S T++K MTDG+L+ E D L +Y +I+DEAHERSL+ D L G K Sbjct: 387 YTIRFEDLTSKETVIKYMTDGVLMRESLTDPELERYSVVIMDEAHERSLSTDVLFGIFKS 446 Query: 216 LLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQL 275 +L RR D ++I+TSAT+D ++FS F API E+ GRT+PV ++Y D + Sbjct: 447 ILRRRRDFRLIVTSATMDSDKFSNFFGRAPIFEIPGRTFPVTIQYLRTQS------EDYI 500 Query: 276 QAIFDAVDELSQESH----------------GDILIFMSGEREIRDTADALNKLNL---- 315 +++ ++ GDILIFM+G+ +I T + + Sbjct: 501 ESVVRQCLQIHCSDMRCNLQKSGNSEEISNGGDILIFMTGQEDIEATCWLIAEKMSFLVE 560 Query: 316 ---RHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 +LP+Y++L + Q ++FQ R++++ATN+AETSLT+ GI++VID G ++ Sbjct: 561 DGVSPLLVLPIYSQLPSDLQIKIFQPSIYRKVIVATNIAETSLTLQGIRFVIDCGFCKVK 620 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRT 431 Y+ + + L + PISQA+A QR GR GR + GIC R+Y+E FL PEI RT Sbjct: 621 VYNPKIGMDSLQVVPISQANAQQRSGRAGRTAPGICYRMYTEKAFLGEMLTSNIPEIQRT 680 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491 NLA+V+L + LG DI +FPF++AP + +I + L LGA+ D LT +G Sbjct: 681 NLANVVLLLKTLGFNDILSFPFMDAPSESSILTSLYQLWSLGALDDDGN-----LTNIGN 735 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 +++ P+DP LA+ ++ A + C+ E ++I + LS+ RP +++ SD +F Sbjct: 736 LMAKFPLDPPLAKTLITASELNCISEIIVIVAILSVPTIFFRPRGREEESDATREKFVVP 795 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ-------- 603 ESD L +N++ N + C +L++ +++ QD++ Q+++ Sbjct: 796 ESDHLTLLNVYLQWKRH------NYNPKWCEKHFLHHKALKKAQDVFYQIKELYLNVMKD 849 Query: 604 ---------------VVKELGIPVNSEPA----EYREIHIALLTGLLSHIGMKDADKQEY 644 +++ I + EP ++ + ++ +G + + Sbjct: 850 PYLIQKGISNKYNNLIIESHEISTSLEPTLDIKKWDNVRKSICSGCFHNSAKIRGIGEYV 909 Query: 645 TGARNARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 + + P S L+ P +++ E++ T + + ++PEW+ VA L Sbjct: 910 NLRTSMPAYLHPSSSLYNCGYIPDYIVYHEVIVTVKEYMNTVTSVEPEWLNEVAPKLFSL 969 Query: 703 TYSEPHWERAQGA 715 + S + R + Sbjct: 970 STSNLNNNRKSDS 982 >UniRef50_A2EVN8 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EVN8_TRIVA Length = 1006 Score = 844 bits (2180), Expect = 0.0, Method: Composition-based stats. Identities = 243/714 (34%), Positives = 386/714 (54%), Gaps = 38/714 (5%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQ------QAIFQEMAKEIDQAAGKVLLRE---AARPEI 71 R+ R SR K+ ++ + I + R+ + P + Sbjct: 283 AREASRLSREKQETKRSTQGSSKSIVGLLDDEAPSVIPTIPLSELPEWKRQTFGSFGPTL 342 Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 LP+S + I++ + ++V I+ GETG GKTTQ+P+ + G +IG TQPR Sbjct: 343 E-KKKLPISDYESQIIDMLSKNRVFILVGETGCGKTTQIPQFLLRSGIAGDLMIGVTQPR 401 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R+AA +VA R+A+E + G IGY+VRF + S NT VK MTDG+LL E DR L Y Sbjct: 402 RVAAISVAKRVADETNSIIGDLIGYQVRFEEKTSRNTKVKFMTDGMLLKECLGDRQLSNY 461 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 I++DEAHER+++ D L G +KELL + LK+I+TSAT+ E+FS F N P++EV G Sbjct: 462 GVIMLDEAHERTIHTDVLFGLMKELLSKDDRLKVIVTSATLQKEKFSSFFFNCPVLEVPG 521 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ--ESHGDILIFMSGEREIRDTADA 309 RT+PV + D LQA + V +L Q E GDIL+F++G+ +I + Sbjct: 522 RTFPVTTSFAVTAFT------DYLQASVNTVLKLHQTEEKPGDILLFLTGQDDIDTACEQ 575 Query: 310 LNKLNLR------HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIK 361 + + + +LP+Y+ L +Q +FQ R++V+ATN+AETS+T+ GI+ Sbjct: 576 IYQRSKPMEENFGKLIVLPIYSSLPTEQQTMIFQPTPPGQRKVVVATNIAETSITIDGIR 635 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-R 420 YV+DPG + RY RT + L + PIS+A+ANQRKGR GR + G CIRLY+ED + + Sbjct: 636 YVVDPGLVKEMRYDPRTGMDTLEVVPISKAAANQRKGRAGRTAAGKCIRLYTEDSYNNEM 695 Query: 421 PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ 480 E T PEI R+N+A V L M +G+ D+ F F++ P + I D + L LGA+ + Sbjct: 696 KETTIPEIQRSNMAMVALDMKVIGIDDLIGFDFMDKPPTKIIIDALDQLYTLGALDEEGN 755 Query: 481 ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA 540 LTPLGR +S+ ++P+LA+M++ + GC E +++ + LS+Q RP KQ Sbjct: 756 -----LTPLGRDMSKFSLNPQLAKMLIMSSMLGCSEEVLVLVAILSVQGIWYRPRKKQAE 810 Query: 541 SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 +D R + E D + ++++ + + C+ +Y++Y ++ +D+ TQ Sbjct: 811 ADAMKARLNRDEGDHMTLLHVFREWQK------NGEREAWCKENYVHYRSLKRAKDVMTQ 864 Query: 601 LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL 660 LRQ +++ +P+ S E I A+++G + + + T + IFPGS L Sbjct: 865 LRQQMEQFHVPLVSCGKEIIPILKAIVSGFFAKAARRYMGTEYKTIVDDHPVYIFPGSAL 924 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 F + P++ + ELV T+R + R +DP W+ +A ++ R + Sbjct: 925 FGREPEYCVFHELVNTTREYMRNTVAVDPRWLVELAPAFYRKASPLEMTSRKRA 978 >UniRef50_Q1C7D5 ATP-dependent helicase HrpA n=4 Tax=Bacteria RepID=Q1C7D5_YERPA Length = 644 Score = 842 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 534/644 (82%), Positives = 579/644 (89%), Gaps = 1/644 (0%) Query: 6 KLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE 65 K + TAL +L LMLRD+ R RRLH +K+ NPDA QAI E+ EI A +V R Sbjct: 2 KSSLTALSTQLGELMLRDQQRIQRRLHSARKINNPDAIQAITHEIEAEIAIAMQRVTRRR 61 Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 AA P I+YPDNLPVSQKKQDI AIRDHQV+IVAGETGSGKTTQLPKIC+ELGRG+KG+I Sbjct: 62 AACPAISYPDNLPVSQKKQDIYNAIRDHQVIIVAGETGSGKTTQLPKICLELGRGVKGVI 121 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 GHTQPRRLAARTVANRIA+EL T GGC+GYKVRF+D V +NT+VKLMTDGILLAEIQQD Sbjct: 122 GHTQPRRLAARTVANRIADELDTSLGGCVGYKVRFNDQVGENTLVKLMTDGILLAEIQQD 181 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 RLLMQYDT+IIDEAHERSLNIDF+LGYL+ELLP+RPDLK+IITSATIDP+RFS+HFNNAP Sbjct: 182 RLLMQYDTLIIDEAHERSLNIDFILGYLRELLPKRPDLKVIITSATIDPQRFSQHFNNAP 241 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRD 305 IIEVSGRTYPVEVRYRPIV++ADD +RDQLQAIFDAVDEL +ES GDILIFMSGEREIRD Sbjct: 242 IIEVSGRTYPVEVRYRPIVDDADDVDRDQLQAIFDAVDELGRESAGDILIFMSGEREIRD 301 Query: 306 TADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVID 365 TADAL K NL HTE+LPLYARLSNSEQNRVFQSH GRRIVLATNVAETSLTVPGIKYVID Sbjct: 302 TADALIKQNLPHTEVLPLYARLSNSEQNRVFQSHHGRRIVLATNVAETSLTVPGIKYVID 361 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 PGTARISRYS+RTKVQRLPIEPISQASANQRKGRCGRVS+GICIRLYSE DFLSRPEFTD Sbjct: 362 PGTARISRYSFRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYSEQDFLSRPEFTD 421 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEILRTNLASVILQMT+LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI T + Sbjct: 422 PEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIQTASNGHQ-Q 480 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LTPLGRQL+QLPVDPRLARMVL+AQK GCVRE MIITSALSIQDPRERP+DKQQASDEKH Sbjct: 481 LTPLGRQLAQLPVDPRLARMVLQAQKSGCVRELMIITSALSIQDPRERPVDKQQASDEKH 540 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 RRF DK+SDFLAFVNLW+YL EQQKALSS FR+LCR+DYLNYLRVREWQDIYTQLRQVV Sbjct: 541 RRFADKDSDFLAFVNLWDYLKEQQKALSSAQFRKLCRSDYLNYLRVREWQDIYTQLRQVV 600 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN 649 KELGIPVNS A+YR +H A+LTGLLSHIG KD +KQE+T Sbjct: 601 KELGIPVNSVAADYRSVHTAILTGLLSHIGQKDVEKQEFTVNDG 644 >UniRef50_B6JZW3 ATP-dependent RNA helicase Prp16 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JZW3_SCHJY Length = 1176 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 227/694 (32%), Positives = 361/694 (52%), Gaps = 34/694 (4%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVS 80 +R++ +KK P + ++ + + +V + + LP Sbjct: 444 VREKEPSENMEKHMKKTPEPSRARKNHDDLPSKKELPIARV------KSLREQRELLPAF 497 Query: 81 QKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVAN 140 ++ +L IRD+QV +V GETGSGKTTQL + E G+G G+IG TQPRR+AA +VA Sbjct: 498 AVREQLLSIIRDNQVTVVVGETGSGKTTQLAQFLYEDGQGKLGMIGCTQPRRVAAMSVAK 557 Query: 141 RIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAH 200 R++EE+ + G +GY +RF D S T++K MTDG+LL E L +Y II+DEAH Sbjct: 558 RVSEEMGVQLGTLVGYSIRFEDVTSPQTIIKYMTDGVLLRESLVQNDLDRYSVIIMDEAH 617 Query: 201 ERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRY 260 ERSLN D L+G L+ +L RR DLK+I+TSAT++ +RFS F AP + GRTYPV+V + Sbjct: 618 ERSLNTDILMGLLRTILSRRRDLKLIVTSATMNAQRFSEFFGGAPQFTIPGRTYPVDVLF 677 Query: 261 RPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLNLR--- 316 D ++A V ++ + GDIL+FM+G+ +I T D + + + Sbjct: 678 S------KAPCSDYVEAAVRQVLQIHVSQPAGDILVFMTGQEDIEVTCDVIKERLAQLTD 731 Query: 317 --HTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 +LP+Y+++ Q ++F + R++V+ATN+AETSLTV GI YV+D G ++ Sbjct: 732 AAPLSVLPIYSQMPADLQTKIFDAAEPGVRKVVVATNIAETSLTVDGISYVVDTGFCKLK 791 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRT 431 Y+ + + L I PISQA+ANQR GR GR G+ RLY+E F + T PEI RT Sbjct: 792 MYNAKMGIDTLQITPISQANANQRSGRAGRTGPGVAYRLYTESAFVREMFQTTLPEIQRT 851 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491 NL++ +L + +LG+ +I F F++ P + L LGA+ + LT LG Sbjct: 852 NLSNTVLLLKSLGVKNIMDFDFMDRPPAATLTTSSYELWTLGALD-----NFGNLTALGS 906 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 +++ P+DP LA++++ A ++GC E + I S LS+ RP ++ + SD +FH Sbjct: 907 KMANFPMDPSLAKLLIIAAEYGCSNEVLTIVSMLSVPSVFYRPKERLEESDAAREKFHVP 966 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 ESD L +N++ ++ C +L+ + + I QL ++K +P Sbjct: 967 ESDHLTLLNIYLQWER------NHCSVAWCTKHFLHSRSLSRARSIRDQLLDIMKFQKLP 1020 Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVM 669 + S +++ I L + + + + S L+ P +V+ Sbjct: 1021 IVSCKSDWDVIRKVLCSAYFNQAATAKGIGEYVHLRTGMPCHLHATSSLYGLGYLPDYVI 1080 Query: 670 VAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 ELV TS+ + + +DP W+ Sbjct: 1081 YHELVLTSKEYMNVVTSVDPYWLAEFGGAFYTLK 1114 >UniRef50_Q759P9 ADR224Wp n=2 Tax=Saccharomycetaceae RepID=Q759P9_ASHGO Length = 1090 Score = 835 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 255/755 (33%), Positives = 376/755 (49%), Gaps = 67/755 (8%) Query: 17 DSLMLRDRLRFSRRLHGVKKVKNPDAQQ----------AIFQEMAKEIDQAAGKVLLREA 66 + RL RRL +K + + Q K + R++ Sbjct: 308 ANARRGSRLVAMRRLQKERKEHSAQTAAIVGTVVGNVLGVKQNDNKGTCDKTSSQVSRQS 367 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-I 125 LPV + K +L+ IRD+QV ++ GETGSGKTTQL + E G G I Sbjct: 368 FEDIQAQRRTLPVYEVKSQLLQVIRDNQVTVIIGETGSGKTTQLAQYLHEDGFCRLGKQI 427 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 G TQPRR+AA +VA R+A E+ E G +GY +RF D S +T +K MTDGILL E D Sbjct: 428 GVTQPRRVAAMSVAERVALEMGVELGKEVGYAIRFEDKTSADTRLKFMTDGILLRETLID 487 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 LL +Y II+DEAHERSLN D LLG+ K LL RR +LK+IITSAT++ +FS+ F +AP Sbjct: 488 DLLEKYACIIMDEAHERSLNTDVLLGFFKNLLTRRRNLKLIITSATMNASKFSQFFGDAP 547 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGEREI 303 + GRT+PV++ Y D ++A + + GDILIFM+G+ +I Sbjct: 548 QFTIPGRTFPVQINY------TSYPVPDYVEAAVQQAASIHLSTSLLGDILIFMTGQEDI 601 Query: 304 RDTADALNKLNL---------------RHTEILPLYARLSNSEQNRVFQSHS--GRRIVL 346 T DAL + + EILP+Y+ L Q R+F R+IV+ Sbjct: 602 EATCDALKERIVDMRVKRKGSIMQDILADVEILPIYSALPADIQGRIFNKSDAKKRKIVV 661 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 ATN+AETSLT+ GIKYVID G +++ Y+ R + L I PIS A+A QR GR GR G Sbjct: 662 ATNIAETSLTIDGIKYVIDCGYSKLKVYNPRIGLYNLAITPISLANAQQRSGRAGRTGPG 721 Query: 407 ICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 I RLY+E+ + PEI RT+LASV+L + +LG+ DI FPF+++P + Sbjct: 722 IAYRLYTENTAIADMHPQSIPEIQRTSLASVLLLLKSLGIEDIFNFPFMDSPPSATLMTS 781 Query: 466 VRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 + L LGA+ + LT +G ++++ P+ P L++++L + K+GC E + I S L Sbjct: 782 MFELWTLGALD-----NFGALTEMGSKMAKFPLQPSLSKILLLSAKYGCSEEMVTIVSML 836 Query: 526 SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY 585 S+ RP ++Q+ SD+ RF ESD L +N++ + +L CR +Y Sbjct: 837 SVPQIFYRPKERQKESDQARNRFVVPESDHLTLLNVFVQWKVHRYSL------DWCRKNY 890 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYT 645 L Y +R DI QL + + + +P+ S + + + + G + K Q Sbjct: 891 LQYRSLRRAYDIREQLIRAMLKEDVPIISSGSGWDILRKCICAGYVHQAARKSGLNQYVH 950 Query: 646 GARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI--- 700 + P S L P +V+ EL+ T++ + + +DP W+ Sbjct: 951 LKNGMELKLHPTSALAGMGDLPPYVVYHELLLTTKEYINLVTAVDPFWLMEYGALFYHVK 1010 Query: 701 --------------KRTYSEPHWERAQGAVMATEK 721 + EP E V+A E+ Sbjct: 1011 FISNREVYGLYPEEQDQDGEPVSESLANRVVACEQ 1045 >UniRef50_C4QXR9 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QXR9_PICPG Length = 967 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 231/703 (32%), Positives = 362/703 (51%), Gaps = 31/703 (4%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 + + VK K + +E E + + LP ++D++ Sbjct: 246 NNEVSAVKGTKLGNVMGIKDKEEKIEHKNFIEAMEDSSSPLDIAEQRRCLPAFTVREDLI 305 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELK 147 IR++Q+V+V GETGSGKTTQL + E G +G+IG TQPRR+AA +VA R++EE+ Sbjct: 306 RTIRENQIVVVIGETGSGKTTQLTQFLYEEGFYKRGIIGCTQPRRVAAMSVAKRVSEEMG 365 Query: 148 TEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNID 207 + G +G+ +RF D S TM+K MTDG+LL E D L +Y II+DEAHERSLN D Sbjct: 366 VKLGNEVGFTIRFEDRTSPRTMIKYMTDGVLLRETLLDSGLEKYSCIIMDEAHERSLNTD 425 Query: 208 FLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEA 267 LLG K++L +R DL++IITSAT++ RFS F NA + GRT+PV++++ Sbjct: 426 ILLGLFKKILTKRRDLRLIITSATMNASRFSEFFGNADTFTIPGRTFPVDIQFS------ 479 Query: 268 DDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL---------NLRH 317 D + A V ++ + GDIL+FM+G+ +I T L + N Sbjct: 480 KYPVADYVDAAIKQVLKIHYGKKPGDILVFMTGQEDIEATCQVLQERIEEIEEDAENKNP 539 Query: 318 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 ILP+Y+ L Q +VF R+ ++ATN+AETSLTV GI +V+D G ++ YS + Sbjct: 540 LSILPIYSSLPADLQAKVFGRSEVRKCIVATNIAETSLTVDGIVFVVDAGLCKLKVYSSK 599 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS-EDDFLSRPEFTDPEILRTNLASV 436 + L + PIS A ANQR GR GR G+ RLY+ + PEI RTNLA+ Sbjct: 600 LGMDILQLAPISFAQANQRSGRAGRTGPGVAYRLYTLTEAEKEMYVQPIPEIQRTNLANT 659 Query: 437 ILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQL 496 +L + +LG+ ++ FPF++ P I + L L AI + LT LG +++ Sbjct: 660 LLLIKSLGVDNLLDFPFIDPPPHATIYSSLYDLWCLDAID-----NLGALTDLGHKMTSF 714 Query: 497 PVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFL 556 P++P L++M++++ + C E II + LS+ + RP ++Q+ SD RF ESD L Sbjct: 715 PMEPVLSKMLIKSHEFKCSTEMCIIVAMLSVPNVFYRPKERQKESDRSRERFFIPESDHL 774 Query: 557 AFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 616 +N++N L+ R C ++L+ +R Q+I QL+ ++ + G+ S Sbjct: 775 TLLNVYNQW------LNHRNSARWCVQNFLHEKSLRRAQEIELQLQSIMMQQGMACRSIG 828 Query: 617 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP--PKWVMVAELV 674 ++ I + + L + + + P S L+ P++V+ EL+ Sbjct: 829 RQWDPIQECICSCLFVNAARFKKFGEYTNLRSVMSMVLHPTSSLYGTADLPEYVVFQELL 888 Query: 675 ETSRLWGRIAARIDPEWVEPVAQHLIK-RTYSEPHWERAQGAV 716 TSR + + + PEW+ R+ E R + A+ Sbjct: 889 LTSREYMNVVTAVKPEWLAKYGSVFYSARSDHEAVLSRLKEAM 931 >UniRef50_A7ASE9 RNA helicase, putative n=1 Tax=Babesia bovis RepID=A7ASE9_BABBO Length = 931 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 227/688 (32%), Positives = 375/688 (54%), Gaps = 31/688 (4%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIR 91 + ++ + A + R+ R + LP+ + ++L A+R Sbjct: 248 SESDDELSDSTASTRKRKTFADRILAKQRRKQRKEHRKLLEERCRLPIYGYRHELLAAVR 307 Query: 92 DHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPG 151 +H +++V GETGSGKTTQ+P+ E+G G G IG TQPRR+AA +VA R+A+E+ T+ G Sbjct: 308 NHPILVVVGETGSGKTTQIPQYLYEVGYGKAGKIGCTQPRRVAAMSVATRVAQEVGTKLG 367 Query: 152 GCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLG 211 +GY +RF D S+ T+VK MTDG+LL E+ + L Y ++IDEAHER+++ D + G Sbjct: 368 QEVGYSIRFEDCTSNQTVVKYMTDGMLLREMMTEPDLSSYSVMMIDEAHERTVHTDIIFG 427 Query: 212 YLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTE 271 +K+L R D ++I+ SAT++ E+F+ +F++API + GR +PV++ Y E Sbjct: 428 LVKDLCRYRDDFRLIVASATLEAEKFALYFDHAPIFRIPGRRFPVQIYY------TKAPE 481 Query: 272 RDQLQAIFDAVDELSQESH-GDILIFMSG----EREIRDTADALNKL--NLRHTEILPLY 324 + L A V ++ GDIL+F+ G E + + L ++R +LP+Y Sbjct: 482 ANFLDASVITVLQIHITQPLGDILVFLPGQQEIEEVQEELQNRLRNRGKDMRELIVLPVY 541 Query: 325 ARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 A L + Q ++F+ + R+ +LATN+AETS+T+ I YVID G +++ YS +T ++ Sbjct: 542 ATLPSDMQAKIFEPTPPNARKAILATNIAETSITLNEIVYVIDCGFCKMNSYSPKTGMES 601 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMT 441 L P S+ASANQR GR GRV G C RLY++ + + DPEI R+NLA V+L + Sbjct: 602 LVTVPCSKASANQRTGRAGRVRPGHCFRLYTKFSYEKEMDDVNDPEIQRSNLAHVVLSLK 661 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 ALG+ D+ F F++ P + + L+ LGA+ + LT GR++++LP+DP Sbjct: 662 ALGIDDLINFDFMDPPAPETLIKALELIYALGALNDKGE-----LTRTGRRMAELPMDPT 716 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVN 560 ++M+L ++K+ C E + I + L + + RP DKQ +D H+ F D L +N Sbjct: 717 YSKMLLASEKYKCSNEIITICAMLGVGNNIFYRPKDKQLHADNAHKNFFRVGGDHLVLMN 776 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR 620 ++N + ++ C +++ + +R +DI QL +++K + + V S + Sbjct: 777 VYNQWED------TDFSVAWCYENFVQHKSLRRARDIREQLVELMKRVEVEVISNCNDTD 830 Query: 621 EIHIALLTGLLSHIGMKDADKQ---EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 I +A+ GL + ++ K T I P S LF + + V+ +LV T+ Sbjct: 831 AILMAVTAGLFTQAAVRSGPKNNASYRTLKNPQNVDIHPQSSLFDQDAQCVVYTDLVMTT 890 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYS 705 R + RI A+I PEW+ +A H + Sbjct: 891 RQYMRIVAQIRPEWLSQLAPHYYSSDHP 918 >UniRef50_A3FQE8 Putative uncharacterized protein n=2 Tax=Cryptosporidium RepID=A3FQE8_CRYPV Length = 867 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 236/744 (31%), Positives = 373/744 (50%), Gaps = 70/744 (9%) Query: 15 RLDSLMLRDRLRFSRRLH-GVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITY 73 RL + + D+ + S+ L + + + + E++ E + K++ + Sbjct: 138 RLSTRKVIDQEKNSKSLILSDGSLIDFELLETTSTEVSSEFS-SRNKIIESQDIELINDV 196 Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 ++LPV + K+ I++++ +H ++IV GETGSGKTTQ+P+ E G G+I TQPRR+ Sbjct: 197 RNSLPVVKFKEQIIKSLEEHPILIVVGETGSGKTTQIPQYLFEAGYYKNGIIACTQPRRV 256 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 AA +VA R+A+E+ + GG +GY +RF D S+ T+VK MTDGILL E + L Y Sbjct: 257 AAMSVAARVAKEMGSRLGGLVGYSIRFEDCTSEETVVKYMTDGILLREFLSEPDLKNYSC 316 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRR------------------------PDLKIIITS 229 I+IDEAHERSL+ D L G +K++ R K+II+S Sbjct: 317 ILIDEAHERSLHTDILFGLVKDVSRFRNSDIYLENDIGKNGKIEGCANYNKNPFKLIISS 376 Query: 230 ATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES 289 AT++ +FS +F+NAPII + GR +PV + Y E + + V ++ Sbjct: 377 ATLEANKFSEYFDNAPIIYIPGRRFPVNIYY------TKSPEANFIDGTVVTVLQIHFSQ 430 Query: 290 ----------------HGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARL 327 GDIL F+ G++EI + L NL ILP+Y+ L Sbjct: 431 IKRSNENMSSKKIIPVGGDILCFLPGQQEIEEAQALLESRLVNKDPNLPELIILPIYSSL 490 Query: 328 SNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPI 385 + +Q ++FQ + R++VLATN+AET+LTV I +V+D G + + Y+ +T ++ L Sbjct: 491 PSEQQAKIFQTTPYGFRKVVLATNIAETALTVDNIGFVVDCGFCKQNSYNPKTGLESLIT 550 Query: 386 EPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALG 444 P SQA+ANQR GR GRV G C RLY++ F PEI R NL + +L + +LG Sbjct: 551 VPCSQAAANQRSGRAGRVRPGKCFRLYTKLSFTTEMEVSNVPEIQRCNLGNAVLVIKSLG 610 Query: 445 LGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLAR 504 + D+ F F++ P + + LL LGA+ + LT +GR +++LP+DP + Sbjct: 611 IDDLLHFDFMDPPPPETLIRALELLYSLGALDDKGE-----LTKVGRTMAELPIDPMHGK 665 Query: 505 MVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN 563 MVL +QK+ V EA I S LS+ + RP +K + +D + F D L +N++N Sbjct: 666 MVLASQKYSVVNEATTIVSMLSVGNSIFIRPKEKAKQADSIRKAFTVHGGDLLTLLNVYN 725 Query: 564 YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-KELGIPVNSEPAEYREI 622 S++ C ++L +++ +DI TQ+ ++ ++L I ++S P E I Sbjct: 726 QWQ------SNDFSGYWCYDNFLQVKSLKKARDIKTQIDSLLSEKLDIQISSNPNELEYI 779 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682 A+ G + T I P S LF P + ELV T++ + R Sbjct: 780 RKAITAGFFLQSARINKGGNYTTIKWRHIVDIHPSSTLFNLKPSAITYTELVLTTKEYMR 839 Query: 683 IAARIDPEWVEPVAQHLIKRTYSE 706 I +W+ VA H Sbjct: 840 NLTEIKTDWLLEVAPHYYHTDDFN 863 >UniRef50_A7AVM7 DEAH box RNA helicase, putative n=3 Tax=Piroplasmida RepID=A7AVM7_BABBO Length = 1016 Score = 833 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 228/685 (33%), Positives = 364/685 (53%), Gaps = 36/685 (5%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 + N Q M +I ++ L E+ + + LPV + + ++L I Q Sbjct: 287 DQPDNSANDSKYSQFMDTDIPESELCERLSESKKKLRETREQLPVFKCRDELLSYIGQFQ 346 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCI 154 V++V GETGSGKTTQL + E G +G+IG TQPRR+AA +V R+A E+ + G + Sbjct: 347 VMVVVGETGSGKTTQLAQFLYESGYYKRGVIGCTQPRRVAAVSVCQRVAAEMGSRVGDLV 406 Query: 155 GYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 GY +RF D S NT VK MTDGILL E D L +Y II+DEAHERSLN D L G LK Sbjct: 407 GYSIRFEDLTSRNTAVKFMTDGILLRETLMDPDLDRYSCIIMDEAHERSLNTDVLFGILK 466 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 ++ RR D+++I+TSAT+D ++F+R F N PI ++ GRT+PV + Y + D Sbjct: 467 SVVARRRDIRVIVTSATMDADKFARFFGNCPIYKIPGRTFPVRIEYMRSMGN------DY 520 Query: 275 LQAIFDAVDELS-QESHGDILIFMSGEREIRDTADAL-----------NKLNLRHTEILP 322 +++ D L E GD+LIFM+G+ +I T + L + +L+ +LP Sbjct: 521 VESAVDKCVSLHISEGPGDVLIFMTGQDDINATCELLDLKLYKVMQSTTRADLQPFCVLP 580 Query: 323 LYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 +Y++L + Q RVF+ + R+++++TN+AETSLT+ GIK+VID G ++ Y+ + + Sbjct: 581 IYSQLPSELQQRVFKKYPYRKVIVSTNIAETSLTLDGIKFVIDSGFCKLKVYNPKVGMDS 640 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMT 441 L I P+SQA ANQR GR GR + GIC RLY+E +L+ E PEI+RTNL +V+L + Sbjct: 641 LQITPVSQAGANQRSGRAGRTAPGICYRLYTERTYLNDLFENNVPEIMRTNLCNVVLLLK 700 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 +L + + F F++ P NI + L LG I +LT +GR+L P++P Sbjct: 701 SLKVKRLTEFDFIDPPHAENILSAMLQLWILGGIDE-----FGELTDIGRKLVHYPLEPP 755 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPRERPMD---KQQASDEK-HRRFHDKESDFLA 557 L++M++ + C+ E + + S +S + + +++++D +F ESD L Sbjct: 756 LSKMMIAGESERCMSEILTVVSVMSAPNVFVVENETDAQRESADNATREKFMVPESDHLT 815 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA 617 +N++ ++ S C L +R ++ QL +V + GI S Sbjct: 816 LLNVYKQWCANGRSDS------WCLQYRLQPKSLRRAAEVRQQLLDIVTKQGIEETSCGT 869 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVE 675 + ++ A+ +G + + A + P S L+ P +V+ E+V Sbjct: 870 NWDQVRRAICSGYFHNASKLKGLGEYSNLRSFAPCFLHPTSALYGMGYTPDYVVYHEVVI 929 Query: 676 TSRLWGRIAARIDPEWVEPVAQHLI 700 TS+ + R +D EW+ + + Sbjct: 930 TSKEYMRHVTAVDAEWLYELGPNFF 954 >UniRef50_C4JEY7 ATP-dependent RNA helicase DHX8 n=25 Tax=cellular organisms RepID=C4JEY7_UNCRE Length = 1446 Score = 832 bits (2149), Expect = 0.0, Method: Composition-based stats. Identities = 245/724 (33%), Positives = 379/724 (52%), Gaps = 35/724 (4%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVK---NPDAQQAIFQEMAKEIDQAAGKVLL 63 + + ++ D + +K+ + + ++ A Sbjct: 381 EQTSKAKAQISRAEFVDEGDYEYVFDDAQKINFIMDSKLEGDRKPLSKEQRLLAQQIDAA 440 Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG 123 + A +LP+ Q ++++L+AI DHQ++I+ GETGSGKTTQ+P+ E G G Sbjct: 441 EKKAASIEETRKSLPIYQFREELLQAIADHQIIIIVGETGSGKTTQIPQYLHEAGYTKGG 500 Query: 124 -LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 IG TQPRR+AA +VA R+AEE+ + G +GY +RF D SD T++K MTDG+LL E+ Sbjct: 501 MKIGCTQPRRVAAMSVAARVAEEMGVKVGNEVGYAIRFEDATSDKTILKYMTDGLLLKEL 560 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 + L QY ++IDEAHER++ D G LK++ RPDLK++I+SATID ++F ++F+ Sbjct: 561 LTEPDLSQYAALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATIDAQKFQKYFD 620 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGER 301 +API + GR YPV++ Y E + L A V ++ + GDIL+F++G+ Sbjct: 621 DAPIFNIPGRRYPVDIHY------TSQPEANYLAAAITTVFQIHITQGRGDILVFLTGQE 674 Query: 302 EIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAET 353 EI L + I P+YA L + Q ++F+ R++VLATN+AET Sbjct: 675 EIEAAEQNLQETARKLGGKVPEMIICPIYANLPSELQTKIFEPTPPGARKVVLATNIAET 734 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 SLT+ GI YVIDPG + + ++ RT ++ L + P S+ASA QR GR GRV G C RLY+ Sbjct: 735 SLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASAGQRAGRAGRVGPGKCFRLYT 794 Query: 414 EDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 + + + T PEI RTNL+SV+L + +LG+ D+ F F++ P + + L L Sbjct: 795 KWAYHNELEANTTPEIQRTNLSSVVLMLKSLGIDDLLDFDFMDPPPAETLIRALEQLYAL 854 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PR 531 GA+ + LT +GRQ+++ P DP LA+ +L A K+GCV E + I + L Sbjct: 855 GALNDHGE-----LTKIGRQMAEFPTDPMLAKAILAAGKYGCVEEILSIIAMLGEASALF 909 Query: 532 ERPMDKQQASDEKHRRFHDKE-SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLR 590 RP DK+ +D RF K+ D L+ +N+WN + S+ R ++L Sbjct: 910 YRPKDKKIHADSARARFTVKDGGDHLSLLNIWNQWVD------SDFSYVWARENFLQQRS 963 Query: 591 VREWQDIYTQLRQVVKELGIPVNSEPAEY-REIHIALLTGLLSHIGMKDADKQEY-TGAR 648 + +D+ QL ++ + + V++ A I A+ G + Y T Sbjct: 964 LTRARDVRDQLAKLCDRVEVAVSTAGANNLVPIQKAITAGFFPNAARLQRGGDSYWTVKN 1023 Query: 649 NARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPH 708 + P S LF+ PKWV+ ELV TS+ + R + PEW+ VA H K+ E Sbjct: 1024 GQTVYLHPSSTLFEVNPKWVIYHELVLTSKEYMRSNMPLQPEWLVEVAPHYHKQKDLETL 1083 Query: 709 WERA 712 R Sbjct: 1084 ANRK 1087 >UniRef50_D2JWV9 Putative pre-mRNA splicing factor n=1 Tax=Filobasidiella depauperata RepID=D2JWV9_9TREE Length = 1087 Score = 831 bits (2147), Expect = 0.0, Method: Composition-based stats. Identities = 223/708 (31%), Positives = 352/708 (49%), Gaps = 68/708 (9%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 + + ++D + D +++ + Sbjct: 391 SQPWLDPMASQVDRVFASD--------------IKGSLLGQKAAKVSAWKTANKIVSYGK 436 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 + +LP+ + + ++ AIRD+Q+++V G+TGSGKTTQ+ + E G +G Sbjct: 437 ITSLSIQEQRKSLPIYKLRDQLVAAIRDNQILVVVGDTGSGKTTQMAQYLAEEGFLERGR 496 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 +G TQPR++AA +VA R+AEE+ G +GY +RF D S T +K MTDG+LL E+ Sbjct: 497 LGCTQPRKVAAVSVAKRVAEEVGCRLGAEVGYTIRFEDMTSLETKIKYMTDGMLLRELLV 556 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 D +Y +++DEAHER++ D L G LK+ RRPDLK+I TSAT+D +F+ +F Sbjct: 557 DPDCSKYSVLMLDEAHERTIATDVLFGLLKKACKRRPDLKLICTSATLDAAKFATYFWGC 616 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREI 303 PI + GR +PVE Y + E D L+A + ++ E GDIL+F++G+ EI Sbjct: 617 PIFTIPGRAFPVETLY------TKEPEPDYLEASLITILQIHLMEPPGDILLFLTGQEEI 670 Query: 304 RDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSL 355 + L + + ILP+YA L + Q+R+F+ R++V+ATN+AETS+ Sbjct: 671 DTACEILYERVKALGPQVPELLILPVYAALPSEMQSRIFEPAAPGARKVVIATNIAETSI 730 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+ GI YVIDPG A+ + Y + + L + PISQA A QR GR GR G C RLY+E Sbjct: 731 TIDGIYYVIDPGFAKQNAYDPKLGMDSLIVTPISQAQARQRAGRAGRTGPGKCYRLYTEI 790 Query: 416 DF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 + PEI RTNLAS IL + A+G+ D+ +F F++ P + + L LGA Sbjct: 791 AYRNEMLPNPIPEIQRTNLASTILTLKAMGINDLISFDFMDPPPAATMLTALEQLYALGA 850 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRER 533 + + LT +GR+++ P+DP L++M++++ +GC EA+ I + L R Sbjct: 851 LDDEGL-----LTRIGRKMADFPLDPPLSKMLIKSVDYGCSEEALTIVAMLQAGGQVFYR 905 Query: 534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 P DKQ +D K +FH E D L + ++N +S C +++ ++ Sbjct: 906 PKDKQAQADAKKAKFHQAEGDLLTLLTVYNGW------KNSKFSNPWCFENFIQTRAMKT 959 Query: 594 WQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS 653 QD+ L S + D + T S Sbjct: 960 AQDVRK--------------------------LALTQSSPPSVSDPSEGYKTLVEGTPVS 993 Query: 654 IFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 I P S LF++PP+W + ELV T++ + I+P+W+ VA + Sbjct: 994 IHPSSALFQRPPEWCVYYELVLTAKEYMHQVTAIEPKWLSDVAPTFFR 1041 >UniRef50_C5DJP0 KLTH0F17974p n=2 Tax=Saccharomycetaceae RepID=C5DJP0_LACTC Length = 1108 Score = 830 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 243/732 (33%), Positives = 373/732 (50%), Gaps = 53/732 (7%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQ---------- 56 + +L + S M+ +R +R +H K + D + E+ ++ Sbjct: 318 ESEFSLNAKKGSRMVAERR--TREVHKAKIEETTDLRGTAIGEVMGVKEKPAGNSDLEPK 375 Query: 57 -AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 L + +LP Q + ++L+ IRD+QVV+V GETGSGKTTQL + Sbjct: 376 EKNSSKNLETSYEHIQEVRKSLPAYQVRSELLQLIRDNQVVVVIGETGSGKTTQLAQFLN 435 Query: 116 ELGRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMT 174 E G G +G TQPRR+AA +VA R+A E+ E G +GY +RF D S +T +K MT Sbjct: 436 EDGFCNSGRLVGCTQPRRVAAMSVATRVAMEMGVELGNEVGYSIRFEDKTSKDTKIKFMT 495 Query: 175 DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDP 234 DGILL E +L +Y II+DEAHERSLN D L G LK LL +R DLK+IITSAT++ Sbjct: 496 DGILLRETLVSEMLDKYSCIIMDEAHERSLNTDVLFGILKNLLSKRRDLKLIITSATMNA 555 Query: 235 ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH---G 291 RFSR F AP + GRT+PV+V Y D +++ ++ + G Sbjct: 556 NRFSRFFGAAPQFTIPGRTFPVQVVYS------RHPVSDYVESAIVQACKIHLSTPVSNG 609 Query: 292 DILIFMSGEREIRDTADALNKL---------------NLRHTEILPLYARLSNSEQNRVF 336 DILIFM+G+ +I T + + EILP+Y+ L Q ++F Sbjct: 610 DILIFMTGQEDIEATCAGVYEKLLDVYAKRSGKQQLNQPEDIEILPIYSALPADVQGKIF 669 Query: 337 QS-HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQ 395 + + R++V+ATN+AETSLTV G++YVID G +++ Y+ + + L I PIS ASANQ Sbjct: 670 EPTPNKRKVVVATNIAETSLTVEGVRYVIDCGYSKLKVYNPQIGLDSLQIAPISMASANQ 729 Query: 396 RKGRCGRVSEGICIRLYSED-DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 R GR GR G RLY+ED F T PEI RTNL++ +L + LG+ DI AFPFV Sbjct: 730 RSGRAGRTGPGFAYRLYTEDSFFDDMYVQTIPEIQRTNLSNTLLLLKYLGVNDIMAFPFV 789 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 + P ++ I + L +GA+ + LT LG+Q++ P+ P L++M+L + ++GC Sbjct: 790 DPPPEQIIMTSLFELWTIGALD-----NFGNLTELGKQMAAFPLQPSLSKMLLVSSQNGC 844 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 E + I S LS+ RP ++++ SD+ RF ESD L +N+++ + Sbjct: 845 SEEILTIVSMLSVPQVFYRPKEREKESDQCRTRFFVPESDHLTLLNVYSQWKA------N 898 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 + CR ++L + ++ ++I QL ++ + +PV S ++ + + G Sbjct: 899 SYSSHWCRRNFLQFKSLQRAREIRRQLYTLMNKKKVPVVSSGTDWDAVRKCICAGYAHQA 958 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWV 692 + + P S LF P +V+ EL+ T+ + +DP+W+ Sbjct: 959 AKLSGLSRYTQLRNGLELRVHPTSALFGAGDLPSYVVYHELLLTTNEYINTVTAVDPDWL 1018 Query: 693 EPVAQHLIKRTY 704 Sbjct: 1019 MNYGVLFYNVKR 1030 >UniRef50_B3L2J4 Atp-dependant rna helicase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L2J4_PLAKH Length = 857 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 234/666 (35%), Positives = 368/666 (55%), Gaps = 33/666 (4%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 E + LP K++ L+ + + V+I+ G+TGSGKTTQ+ + + Sbjct: 185 NKLTNEPYSERYLQLLEEKKKLPAWSAKKNFLKLFKKNDVLIIVGDTGSGKTTQISQFVL 244 Query: 116 ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 E K I TQPRR+AA +VA R++EEL E G +GY +RF D S T++K +TD Sbjct: 245 ESKFAEKKSIAVTQPRRVAAMSVAARVSEELDVELGTYVGYTIRFEDRSSTKTVIKYLTD 304 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 G+LL E D LL +Y+TII+DEAHER+L D L G +K + +R DLK+I+ SAT+D Sbjct: 305 GMLLRESMYDPLLKRYNTIILDEAHERTLATDILFGVIKNIQEQRNDLKLIVMSATLDAG 364 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDIL 294 +F + FN + I+ + GR YPVE+ Y E+D ++ + V ++ E GDIL Sbjct: 365 KFQKFFNGSQILNIPGRLYPVEIFY------TLQAEKDYIRVVIRTVYDIHVNEEEGDIL 418 Query: 295 IFMSGEREIRDTADALNKLNLRH-----TEILPLYARLSNSEQNRVFQSHSG-------- 341 +F++GE EI T + KL ++ +LPLY+ L +++Q ++F+ Sbjct: 419 VFLTGEEEIEMTKKEIEKLVSKNENAGQLVVLPLYSSLPSTQQQKIFEPAPKPRFKGDKM 478 Query: 342 -RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 R+ +L+TN+AETSLT+ GI YVIDPG ++ Y+ R +V+ L I PIS+ASA QR GR Sbjct: 479 GRKCILSTNIAETSLTIEGIVYVIDPGFSKQKVYNPRARVESLLIAPISKASAQQRAGRA 538 Query: 401 GRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDK 459 GR G C RLY+E F PE T PEILR+NL SV+L + LG+ D+ F F++ P Sbjct: 539 GRTKPGKCFRLYTEKCFEQTLPEQTYPEILRSNLGSVVLNLKKLGIDDLVHFDFMDPPAP 598 Query: 460 RNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAM 519 + + L LGA+ + + LT G +S+ PVDP+LA++++E+ + C E + Sbjct: 599 ETLMRALEQLNYLGALDDEGE-----LTQKGHFMSEFPVDPQLAKVLIESPNYCCSSEIL 653 Query: 520 IITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR 579 I + LS+ RP K + +DE RF + D L +N+++ + + NA ++ Sbjct: 654 TIAAMLSVPYCFLRPKVKGKEADEMKTRFSHLDGDHLTLMNVFHAFVNYSR-MDINASKK 712 Query: 580 LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV----NSEPAEYREIHIALLTGLLSHIG 635 C +LN+ + Q++ QL + ++++ + + S P Y I ALL+G + Sbjct: 713 FCYDYFLNHRAMTSAQNVRNQLIRTMEKMELKIVSMNPSHPDYYVNIRKALLSGFYQQVA 772 Query: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 K + T ++ P S +F+ P+WVM EL+ T++ + R +RID +W+ + Sbjct: 773 YKTSKGYYITVKDIQIVTLHP-STVFQINPEWVMYHELILTTKNFIRTVSRIDGKWLLEI 831 Query: 696 AQHLIK 701 A+ Sbjct: 832 ARSYYD 837 >UniRef50_A9US44 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9US44_MONBE Length = 1322 Score = 829 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 235/708 (33%), Positives = 360/708 (50%), Gaps = 48/708 (6%) Query: 29 RRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILE 88 + + A + F E KE D+ + LP+ +Q++L Sbjct: 562 KSDDPADQEPEDHAAGSKFAEHMKEDDKEDNATSHFARTKTIKEQRQYLPIYAVRQELLN 621 Query: 89 AIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKT 148 IRD+QV+I+ G+TGSGKTTQ+ + E G G G IG TQPRR+AA +VA R++EE+ Sbjct: 622 IIRDNQVIIIVGQTGSGKTTQMTQYLYEAGYGDFGTIGCTQPRRVAAMSVAKRVSEEMGV 681 Query: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 E G +GY +RF D S T++K MTDGILL E + L QY II+DEAHERSLN D Sbjct: 682 ELGKQVGYSIRFEDVTSRETVIKYMTDGILLRESLNEGDLDQYSAIIMDEAHERSLNTDV 741 Query: 209 LLGYLKELLP---------------------RRPDLKIIITSATIDPERFSRHFNNAPII 247 L G L++++ RR DLK+I+TSAT+D +F+ F N P+ Sbjct: 742 LFGLLRDVVARCGTAAPRCVRPSHSRVPRCIRRRDLKLIVTSATMDSTKFATFFGNVPVF 801 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIF-DAVDELSQESHGDILIFMSGEREIRDT 306 + GRT+PVEV + A + D ++A AV Q GD+LIFM+G+ +I T Sbjct: 802 NIPGRTFPVEVFF------AKNPVDDYVEAAIKQAVQIHLQPHPGDMLIFMTGQADIEAT 855 Query: 307 ADALNKL------NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI 360 L + ++ ILP+Y++L + Q ++F+ R+ ++ATN+AETSLTV GI Sbjct: 856 CSVLAERLEALGEDVPPLSILPIYSQLPSDLQAKIFKKSDVRKCIVATNIAETSLTVDGI 915 Query: 361 KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LS 419 +VID G ++ Y+ + + L I PISQA+ANQR GR GR G RLY+E + Sbjct: 916 MHVIDSGFCKLKCYNPKIGIDDLQIYPISQANANQRSGRAGRTGPGNAYRLYTEAIYKNE 975 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 T PEI RTNLA+V+L + +LG+ ++ F F++ P + I + + L LGA+ Sbjct: 976 LLPLTVPEIQRTNLANVVLLLKSLGVENLMDFHFMDPPPQETILNSMYNLWILGALD--- 1032 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 + LTPLGRQ+ + P+DP ++M++ + C E + I S LS+ RP +++ Sbjct: 1033 --NTGALTPLGRQMVEFPLDPAQSKMLIVSADLECSSEILTIVSMLSVDKHFFRPPGREE 1090 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 SD K +F ESD L +N + S+N +++ +R+ ++I Sbjct: 1091 ESDLKREKFAVPESDHLTLLNTYQQW------KSNNYSSSWASEHFIHAKSMRKVREIRM 1144 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG 659 QL ++K +PV S + + + + H + + P S Sbjct: 1145 QLMDIMKSQKVPVISSGTSWDAVRKCICSAYFHHAARLKGIGEYVNARTGMPAHLHPTSS 1204 Query: 660 LFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 L+ P WV +LV T++ + + +DP W+ + S Sbjct: 1205 LYGMGINPDWVCYHDLVMTTKEYMQFVTAVDPLWLAELGNIFFSVKDS 1252 >UniRef50_C5X1W0 Putative uncharacterized protein Sb01g037170 n=2 Tax=Poaceae RepID=C5X1W0_SORBI Length = 692 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 225/680 (33%), Positives = 356/680 (52%), Gaps = 71/680 (10%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 + LPV Q+K++ L ++RD+Q +I+ GETGSGKTTQ+P+ + Sbjct: 44 NRWNGRPYTARYFEILEKRRTLPVWQQKEEFLRSLRDNQTLILVGETGSGKTTQIPQFVL 103 Query: 116 EL-GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMT 174 E G + ++ TQPRR+AA +V+ R+AEE+ G +GY +RF D S T++K +T Sbjct: 104 EAEGLSNRSMVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLT 163 Query: 175 DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDP 234 DG+LL E D LL +Y I++DEAHER+L D L G LKE+L RPDLK+++ SAT++ Sbjct: 164 DGMLLREAMADPLLEKYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEA 223 Query: 235 ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDI 293 E+F +F+ AP+++V GR +PVE+ Y + ERD L+A V ++ E GDI Sbjct: 224 EKFQGYFSGAPLMKVPGRLHPVEIFY------TQEPERDYLEAAIRTVVQIHMCEPAGDI 277 Query: 294 LIFMSGEREIRDTADALNKLNLRH------TEILPLYARLSNSEQNRVFQS--------- 338 L+F++GE EI D +NK +++PLY+ L + Q ++F+ Sbjct: 278 LVFLTGEEEIEDACRKINKEINNMGDQVGTVKVVPLYSTLPPAMQQKIFEPAPAPLKEGG 337 Query: 339 HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398 GR+IV++TN+AETSLT+ GI YVIDPG ++ Y+ R +V+ L + PIS+ASA+QR G Sbjct: 338 PPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAG 397 Query: 399 RCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 R GR G C RLY+E F T PEILR+NLA+ +L + LG+ D+ F F++ P Sbjct: 398 RAGRTQPGKCFRLYTEKSFNEDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 457 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 + + +L LGA+ + LT LG +S+ P+DP++++M Sbjct: 458 APETLMRALEVLNYLGALDDEGN-----LTQLGEMMSEFPLDPQMSKM------------ 500 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAF 577 + Q+A+DE RF + D L +N+++ + +N Sbjct: 501 ------------------EAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ------NNED 536 Query: 578 RRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSH 633 + C +++N ++ ++ QL +++ + + S Y I A+L G Sbjct: 537 PQWCYENFINSRALKSADNVRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLAGYFMQ 596 Query: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 + + T N + P + + K P+WV+ E V T+R + R I EW+ Sbjct: 597 VAHLERTGHYLTVKDNQVVHLHPSNCMDHK-PEWVIYNEYVLTTRNFIRTVTDIGGEWLI 655 Query: 694 PVAQHLIKRTYSEPHWERAQ 713 +A H + P E + Sbjct: 656 DIAPHYYDLSNF-PSCEAKR 674 >UniRef50_B0ECA9 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative n=2 Tax=Entamoeba RepID=B0ECA9_ENTDI Length = 845 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 221/666 (33%), Positives = 373/666 (56%), Gaps = 32/666 (4%) Query: 48 QEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 ++ ++I+ K+ R + + LP+ KK++I+ +I+++Q+ I+ GETGSGKT Sbjct: 200 NKIEEKIEDKEDKIEKRREIKKI---REELPIFFKKKEIIRSIKENQINIIIGETGSGKT 256 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+ + ME G G G IG TQPRR+AA +VA R++EE+ ++ G +GY +RF D S Sbjct: 257 TQIAQYLMEEGIGKNGKIGCTQPRRVAAVSVAQRVSEEVGSKLGEEVGYLIRFEDKTSKK 316 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 T +K MTDGILL E+ +D +L +Y II+DE HERSLN D L G +K ++ R DLK+II Sbjct: 317 TKIKFMTDGILLREVIKDPMLEEYSVIIMDEVHERSLNTDILFGIIKRIIQERNDLKLII 376 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS- 286 T+ATI+ + F PII + GRT+PV V Y +D ++ + + Sbjct: 377 TTATINENKLIEFFGIIPIIHIEGRTFPVSVEYLKTTP------KDYIEMAIKQILSIHM 430 Query: 287 QESHGDILIFMSGEREIRDTADAL-------NKLNLRHTEILPLYARLSNSEQNRVFQSH 339 + GDIL+FM+G+ +I + + L + + EI+P+Y++LSN Q ++F Sbjct: 431 NQEKGDILVFMTGQEDIEVSCELLKEKYKEIKEEKKQEIEIIPIYSQLSNEAQKKIFIKS 490 Query: 340 SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGR 399 + R+++++TN+AETSLTV GIKYVID G + Y+ + ++ L I P S+ +A QRKGR Sbjct: 491 NKRKVIISTNIAETSLTVKGIKYVIDSGLGKWKIYNPKIGMETLQIFPESKQNAEQRKGR 550 Query: 400 CGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 GR GIC RL++E+ F E PEI R+NL +VIL++ A+G+ DI ++ P+ Sbjct: 551 AGRTETGICYRLFTENTFKYELLESPIPEIQRSNLNNVILELKAIGINDINKIELIDKPN 610 Query: 459 KRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREA 518 + I + + L LGA+ +T LG+++ +LP++P L++MV+ +QK C++E Sbjct: 611 EERILNSMYELWILGALDEIGN-----ITKLGKEMVELPLEPSLSKMVIISQKFECIKEV 665 Query: 519 MIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR 578 + I + L++ + RP ++++ +D +F+ +SD + +N++N E ++ Sbjct: 666 LTIVAMLTVPNIFIRPKEREKEADISREKFYQPDSDHITLINVYNQWKEHEEN------E 719 Query: 579 RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD 638 + C +Y+N + + +DI QL+ ++ + GI S ++ + + Sbjct: 720 QWCNKNYINSKAMNKAKDIRNQLKDLINKKGINEISCGRNLDKLKKCITASYFYNAAKL- 778 Query: 639 ADKQEYTGARNARFSIFPGSGLFK--KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696 K + I P S LF K+V+ EL+ T++ + R I+ +W+ + Sbjct: 779 KGKNYINLRTGVQCLIHPTSALFNMGFKSKYVIYHELLLTTKSYMRCITSIEGKWLPELG 838 Query: 697 QHLIKR 702 + K Sbjct: 839 EIFFKT 844 >UniRef50_C0H5K5 Splicing factor, putative n=2 Tax=Plasmodium falciparum 3D7 RepID=C0H5K5_PLAF7 Length = 1151 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 223/716 (31%), Positives = 368/716 (51%), Gaps = 70/716 (9%) Query: 42 AQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGE 101 + I+ + + K + + ++LP+ + K ++L+A+ ++ ++I+ GE Sbjct: 444 KKDKIYSSLFNIENNNKDKKNTLKDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGE 503 Query: 102 TGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFS 161 TGSGKTTQ+ + E G G+I TQPRR+AA +VA R++ E+ + G +GY +RF Sbjct: 504 TGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFE 563 Query: 162 DHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP 221 D+ + +T ++ +TDGILL E D+ L +Y II+DEAHERS+N D LLG LK + +R Sbjct: 564 DNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRN 623 Query: 222 DLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDA 281 DLK+I+TSATID ++FS F NAPI + GRT+ V + Y +D +Q Sbjct: 624 DLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTP--CNDYIECAVQKAIQI 681 Query: 282 V--DELSQESHGDILIFMSGEREIRDTADALNKLNLR----------------------- 316 D + GDILIFM+G+ +I T L++ Sbjct: 682 HVSDNNYDNNFGDILIFMTGQEDINATCYLLSERFYEVYESYKESKNNKKDTINKIKNIL 741 Query: 317 -----------------------------HTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 I P+Y++LS+ +Q+++F+ + R+I+++ Sbjct: 742 NEDNNNNNNDSNIKKKVDGDNNTNDHMIYPFYIFPIYSQLSSEQQSKIFKKYDLRKIIVS 801 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETSLT+ GIKYVID G ++ Y+ + L + PISQA+ANQR GR GR GI Sbjct: 802 TNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPISQANANQRSGRAGRTGAGI 861 Query: 408 CIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 C RLY+E+ FL + PEI R+NL++V+L + +L + ++ F F++ P K +I + + Sbjct: 862 CYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKESIINSL 921 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526 L LGAI + LT +GR++ Q P+DP L+++V+ +Q C +E +II S LS Sbjct: 922 HELWVLGAINNEGN-----LTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLS 976 Query: 527 IQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 + ++ + K +F ESD L +N++ S N C +++ Sbjct: 977 SPSIFLESKENNESIESKKEKFTVPESDHLTLLNIYLQWR------SHNYSYSWCTKNFI 1030 Query: 587 NYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG 646 Y + + +++Y+QL ++K L I S ++ I + +G + + + Sbjct: 1031 QYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYINL 1090 Query: 647 ARNARFSIFPGSGLFK--KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 N + P S L+ P +V+ E+V T++ + R +DPEW+ + Sbjct: 1091 RTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVTTVDPEWLCELGPLFF 1146 >UniRef50_A2EN72 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EN72_TRIVA Length = 890 Score = 825 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 239/730 (32%), Positives = 369/730 (50%), Gaps = 47/730 (6%) Query: 22 RDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQ 81 R R + + K N + + + E + + + LP+ Sbjct: 136 RKRKEKEQLATDLTKSVNLEKISKGKEIIEAETAGDSQFINHLKDTGKI--NRAKLPIMD 193 Query: 82 KKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANR 141 ++ IL+ I ++ VVI+ GETGSGKTTQL + E G G G I TQPRR+AA ++A R Sbjct: 194 FREKILKVISENSVVIIVGETGSGKTTQLTQFFYEDGYGKFGQIVCTQPRRVAACSIAKR 253 Query: 142 IAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHE 201 +A+E+ E GG +GY +RF + +SD T++K MTDGILL E + L +Y II+DEAHE Sbjct: 254 VADEMGVELGGLVGYAIRFEEALSDKTIIKYMTDGILLRESLNEDDLYKYSVIIMDEAHE 313 Query: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261 R+LN D L G LK++L RR DLK+I+TSAT+D +FS++F API + GRTY VE + Sbjct: 314 RALNTDVLFGVLKKILSRRSDLKVIVTSATMDASKFSKYFGGAPIFHIQGRTYDVEPFFL 373 Query: 262 PIVEEADDTERDQL-QAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL-----NL 315 + D + +A+ A +ES GDILIFM+G+ ++ T + + N Sbjct: 374 RSNPQ------DYVYEAVRQACSIHLKESPGDILIFMTGQDDVECTCQLIREHLAKIENA 427 Query: 316 RHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 + P+Y++L +Q +VF++ R+ V+ATN+AETSLT+ GI+YVID G + YS Sbjct: 428 PEMAVFPIYSQLPVEQQAKVFENLKIRKCVVATNIAETSLTIDGIRYVIDSGFCKQKSYS 487 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLA 434 + + L ++PISQA+A QR GR GR SEG C RL++E F T PE+ RTNLA Sbjct: 488 SKAGLDTLLVQPISQAAATQRMGRAGRTSEGKCWRLFTETSFKYEMLPMTIPEVQRTNLA 547 Query: 435 SVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLS 494 +VIL + +LG D+ +F F++ P N + L L A+ + KLT LG+ + Sbjct: 548 NVILLLKSLGFDDVLSFDFMDPPPLDNFLHAMNQLWSLRALDNEG-----KLTKLGKDMV 602 Query: 495 QLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESD 554 Q P+DP L++M+L K GC+ E + I S LS+ + +P +++ +D +F ESD Sbjct: 603 QFPLDPTLSKMLLVGNKFGCLEEILTIVSMLSVSEIFYKPHGREEEADAMRMKFLVPESD 662 Query: 555 FLAFVNLWNYLGEQQ-----KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 L +N++N K + +L+ + + + DI QL + + G Sbjct: 663 HLTMLNVFNLWFNAGLNRPTKKEQEQERAIFAKRHFLHNVTLCKALDIRQQLEDIALQGG 722 Query: 610 IPVNSEP-AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP--PK 666 + ++ + + + + H Y + P S L P+ Sbjct: 723 MKMSHCGLENWDIVRKVICSSYFHHAAHLKNLSTYYNIQTGVECIVHPTSSLAGLSYIPE 782 Query: 667 WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYG 726 +++ ELV T R + IDP W+ +A T +YG Sbjct: 783 YIVYHELVLTKRHYLHGVTAIDPLWLSQMAPEFFTATD-------------------LYG 823 Query: 727 LPIVAARKVN 736 P+ + Sbjct: 824 NPLEEGKPKP 833 >UniRef50_Q6FTI2 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida glabrata RepID=Q6FTI2_CANGA Length = 1057 Score = 824 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 229/710 (32%), Positives = 365/710 (51%), Gaps = 51/710 (7%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEI----------TYPDNL 77 + +K K A +++ + + I +L Sbjct: 282 RNQNDSAEKAKESTNLSGTSLGEALGLNKDSNILDNSRKTNKNIDKQTATEDVDKTRKSL 341 Query: 78 PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-KGLIGHTQPRRLAAR 136 P+ + + ++L+ IRD+QV I+ GETGSGKTTQL + E G GLI TQPRR+AA Sbjct: 342 PIYKARANVLQMIRDNQVSILIGETGSGKTTQLAQYLYEDGYTRDGGLIACTQPRRVAAM 401 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 +VA R+A+E+ + G +GY +RF D +T +K MTDGILL E D L +Y III Sbjct: 402 SVAKRVAQEMDKKVGDLVGYSIRFEDKTGPSTKIKFMTDGILLRETLIDENLEKYKVIII 461 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLN D LLG LK L+ RR D+KIIITSAT+D +FS+ F P +V G+TYPV Sbjct: 462 DEAHERSLNTDVLLGLLKNLVKRRRDIKIIITSATLDANKFSQFFGGLPQYKVPGKTYPV 521 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQE---SHGDILIFMSGEREIRDTADALNKL 313 +V + T D ++A + GDILIFM+G+ +I + + + Sbjct: 522 QVMH------TSGTVPDYVEAAVSQAVRIHLTTAIQSGDILIFMTGQEDILCCIELIKER 575 Query: 314 ---------------NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLT 356 + E+ P+Y+ L QNR+F R+IV++TN+AETSLT Sbjct: 576 IVDLYGKKYGINTFDKVDDVELFPIYSALPAEIQNRIFLDLDIGKRKIVVSTNIAETSLT 635 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD 416 + GI+YVID G +++ Y+ + + L I PIS A+ANQR GR GR + GI RLYSE+ Sbjct: 636 ISGIRYVIDCGYSKLKVYNPKIGLDSLAIAPISIANANQRSGRAGRTAPGIAYRLYSEET 695 Query: 417 FLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 L+ + T PEI RTNL++++L + +LG+ ++ FPF++ P + + L LG + Sbjct: 696 ELTDMYQQTIPEIKRTNLSNIVLTLKSLGIKNVVDFPFLDPPSIETLMASMYELWFLGVL 755 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 D + L LG+++ P+ P L+++++++ GC +E + I + LS+ ERP Sbjct: 756 NDDGE-----LNALGKKMVNFPLQPTLSKVLIQSISFGCSKEVVTIVAMLSVPQVFERPK 810 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 ++Q+ +DE +RF ESD L +N+++ S+ + C+ +++ Y + + Sbjct: 811 ERQKEADEARKRFFISESDHLTLMNVYDQW------KSAKYSPKWCKKNFVLYKSLIRAR 864 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 +I TQ+ ++K+ + S ++ I + +G + + Sbjct: 865 EIRTQIVSLLKQQKHKLKSAGSDLSIIRKCICSGFAQQAAKASGLTKYVHLRTGMELRVH 924 Query: 656 PGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 P S L+ P P +V+ E++ T + + +DP W+ L Sbjct: 925 PTSSLYGLPNLPPYVIYHEMLLTEQEYICCVTSVDPLWLADYGSLLYDVQ 974 >UniRef50_Q03319 Probable ATP-dependent RNA helicase prh1 n=2 Tax=Schizosaccharomyces RepID=PRH1_SCHPO Length = 719 Score = 824 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 238/720 (33%), Positives = 383/720 (53%), Gaps = 46/720 (6%) Query: 15 RLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQE--------MAKEIDQAAGKVLLREA 66 + L D L +R+ K KN A + ++ + ++ D A +V+ + Sbjct: 13 SITKQNLTDGLVGGQRIKAPNKKKNRKASKNTTKKSTVSVVNFLEQDTDFGANEVVGSDN 72 Query: 67 ARPE-------------ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKI 113 + PE + NLP+ + + + I+D++V++V GETGSGK+TQ+P+ Sbjct: 73 SSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQF 132 Query: 114 CMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLM 173 E +G + TQPRR+AA +A R+A E G +GY +RF D S T +K + Sbjct: 133 LNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYL 192 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATID 233 TDG+LL E+ D +L QY T+I+DEAHER+L D LLG++K+++ +RP L++II SAT++ Sbjct: 193 TDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLN 252 Query: 234 PERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGD 292 ERFS F+ A I +SGR YPV++ Y E D L A + +L + GD Sbjct: 253 AERFSEFFDGAEICYISGRQYPVQIHY------TYTPEPDYLDACLRTIFQLHTKLPPGD 306 Query: 293 ILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRI 344 IL+F++G+ EI + NL + PL+A L +Q +VF + R++ Sbjct: 307 ILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKV 366 Query: 345 VLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVS 404 VL+TN+AETS+T+ GI+YVID G A+I +++ + ++ L ++PISQ++A QR GR GR + Sbjct: 367 VLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREA 426 Query: 405 EGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQD 464 G C R+Y+E DF P+ T PEI R +L+ +L + A G D+ F +++ P K + Sbjct: 427 AGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLR 486 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 + L +GA+ + + LG Q+S +P+ P LAR VL A++H C+ E + + S Sbjct: 487 ALEHLYSIGALDDNG-----HINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSC 541 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 LS P +K+ + E +F E D L +N E S ++ ++ C + Sbjct: 542 LSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLES----SHDSRKQWCSQN 597 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPA-EYREIHIALLTGLLSHIGMKDADKQE 643 ++N ++ DI QLR+ + G +NS P + ++ L+G +++ + D Sbjct: 598 FINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDGSY 657 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 T N SI P S LF K + +M ELV T++ + R + I W+ VA H + R Sbjct: 658 RTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHYLARR 717 >UniRef50_Q9H5Z1 Probable ATP-dependent RNA helicase DHX35 n=44 Tax=cellular organisms RepID=DHX35_HUMAN Length = 703 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 225/662 (33%), Positives = 367/662 (55%), Gaps = 42/662 (6%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLI 125 AA LPV + + IL I ++Q V++ GETG GK+TQ+P+ E G +G + Sbjct: 43 AALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRV 102 Query: 126 -GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD-NTMVKLMTDGILLAEIQ 183 G TQPRR+AA TVA R+AEE G +GY +RF D T +K +TDG+L+ E+ Sbjct: 103 VGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMM 162 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN- 242 D LL +Y I++DEAHER+L D +G LK++ +R DL++I+ SAT+D ++F FN Sbjct: 163 VDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQ 222 Query: 243 ---------NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGD 292 I+ V GRT+PV++ Y D +++ + V ++ Q E GD Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQS------PVPDYIKSTVETVVKIHQTEGDGD 276 Query: 293 ILIFMSGEREIRDTADALNKL--------NLRHTEILPLYARLSNSEQNRVFQS--HSGR 342 +L F++G+ E+ L + RH +LP+YA L + EQ +VF+ S R Sbjct: 277 VLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVR 336 Query: 343 RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGR 402 ++++ATNVAETS+T+ GI YVID G ++ Y+ RT ++ L + P+SQASANQR GR GR Sbjct: 337 KVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGR 396 Query: 403 VSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 G C RLY+E+ F P+ T PE+ R+NLA VILQ+ ALG+ ++ F F+ P +++ Sbjct: 397 SRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSM 456 Query: 463 QDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 + LL LG + D +LT PLG ++++ P++P A+M+LE+ GC +E + I Sbjct: 457 VQALELLYALGGLDKD-----CRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSI 511 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 + + IQ+ P +++ + HR+F +E D L +N++ + N + C Sbjct: 512 AAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAF------IKHNKDSKWC 565 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADK 641 + +LNY + + QL++++ + +P S + + +++G ++ + Sbjct: 566 QEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTG 625 Query: 642 QEYTGARNARFSIFPGSGLF-KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 T + I P S L+ +KPP+WV+ E+++TS+ + R I+ W+ +A H Sbjct: 626 AYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685 Query: 701 KR 702 ++ Sbjct: 686 QQ 687 >UniRef50_Q55CD3 DEAD/DEAH box helicase n=2 Tax=Eukaryota RepID=Q55CD3_DICDI Length = 730 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 218/688 (31%), Positives = 371/688 (53%), Gaps = 40/688 (5%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEIT-YPDNLPVSQKKQDILEAIRDHQVV 96 K P Q I + + + ++ + + EI ++LPV K +L+ ++H V Sbjct: 33 KKPVQLQQISNDKINDNNNLKNQLEIPKEIPKEIKLQKESLPVFTAKDALLKNFKEHSTV 92 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 I+ ETG+GKTTQ+P+ E G G+I TQPRR+AA +++ R+++E+ E G +GY Sbjct: 93 IIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRRVAAVSISKRVSQEMGVELGDQVGY 152 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 VRF D ++ T +K MTDG+L+ E D L +Y II+DEAHER+LN D L G LK + Sbjct: 153 CVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSI 212 Query: 217 LPRR---PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273 RR LKIII SAT+D E FS++FNNAP++ + GR +PV++ Y ++ ++D Sbjct: 213 QKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYY------TEEIQKD 266 Query: 274 QLQAIFDAVDELS-------------QESHGDILIFMSGEREIRDTADALNKLNLR---- 316 + A V ++ +E GDIL+F++G EI + L R Sbjct: 267 YVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVG 326 Query: 317 --HTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 + P+++ L +Q +VF+ R+++LATN+AETSLT+ GI+YV+D G + Sbjct: 327 SKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSK 386 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 ++ + + L I PIS+ASA QR GR GR EG C RLY+++ F + PEI R+N Sbjct: 387 IFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSN 446 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 +A+VILQ+ +G+ DI +F F+E+P ++ + LL L AI+ + LT LG++ Sbjct: 447 IANVILQLKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNG-----SLTELGKK 501 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 ++ P+DP ++ ++++ + C E +II S LS++ P +K++ ++ + F + Sbjct: 502 MALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESIFFTPKEKKKEVEDVKKIFFSPD 561 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 D + F+N++ + + ++ C ++N + + +++ QL + L +P+ Sbjct: 562 GDHITFLNVFREFQKSKPQQ----QQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPI 617 Query: 613 NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAE 672 S +++ I + + G + + DK+ T N I P S LF + P+ ++ E Sbjct: 618 VSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPTSFLFDQKPQHILYNE 677 Query: 673 LVETSRLWGRIAARIDPEWVEPVAQHLI 700 L T++ + R I+ W+ + Sbjct: 678 LTITTKAFARNIIPIEGSWLAEICPKYY 705 >UniRef50_D1ZEJ8 Whole genome shotgun sequence assembly, scaffold_22 n=1 Tax=Sordaria macrospora RepID=D1ZEJ8_SORMA Length = 1177 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 226/671 (33%), Positives = 354/671 (52%), Gaps = 38/671 (5%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 AA+ +LPV + L+AI+++QV+I+ GETGSGKTTQ+P+ E Sbjct: 255 KEKIEAAERAAKSIQEVRKSLPVYAYRDAFLDAIKEYQVLILVGETGSGKTTQIPQYLHE 314 Query: 117 LGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 G G + TQPRR+AA +VA R+A+E+ + G +GY +RF D SD T++K MTD Sbjct: 315 AGYTEGGMKVACTQPRRVAAMSVAARVADEMGVKVGREVGYSIRFEDCTSDKTILKYMTD 374 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 G+LL E+ L Y I+IDEAHER+++ D LL +K+L RPDLK+II+SAT++ E Sbjct: 375 GMLLREMVTSPTLEGYSAIMIDEAHERTVHTDILLALIKDLTRARPDLKLIISSATLNAE 434 Query: 236 RFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDIL 294 +FS +F++API V GR +PV+V Y E + L+A V ++ + G IL Sbjct: 435 KFSTYFDDAPIFNVPGRVHPVDVYY------TSAPESNYLEASLVTVFQIHATQPEGGIL 488 Query: 295 IFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVL 346 +F++G+ EI + + ++ LP+YA + + Q ++F+ R++V Sbjct: 489 VFLTGQEEIDKACERVEEIKRKLGSRVPEIIPLPIYANMPSELQAKIFEPTPPGARKVVF 548 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSY--RTKVQRLPIEPISQASANQRKGRCGRVS 404 +TN+AETSLT+ GI YVID G + + +S T L + P S+A+ANQR GR GRV Sbjct: 549 STNIAETSLTIDGIVYVIDCGYVKENTFSPVGTTGQSTLAVVPCSRAAANQRMGRAGRVR 608 Query: 405 EGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 G C RLY++ +LS E PEI RT+L+SV+LQ+ ALG+ D+ F F++ P + Sbjct: 609 PGKCFRLYTKFAYLSEMDESPTPEIQRTSLSSVVLQLKALGIEDLLGFDFLDPPPTELLI 668 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 + +L LGA+ + A +LT +GRQ+ + P +P LA+ ++ A GCV E + I S Sbjct: 669 KSLNMLYALGALNS-----AGQLTRVGRQMGEFPAEPMLAKALIAATTEGCVDEMLTIVS 723 Query: 524 AL-SIQDPRERPMDKQQASDEKHRRFHDKE-SDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 L + P DK+ +D RF K+ D L +N++N + ++ Sbjct: 724 MLGEVATLFFCPKDKKVHADSARARFTVKDGGDHLTLLNVYNQWVD------ADYSPIWA 777 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKE-LGIPVNSEP--AEYREIHIALLTGLLSHIGMKD 638 + ++L + +D+ QL ++ L ++ + + I AL + + Sbjct: 778 KENFLTQRSLTRARDVRDQLAKLCDRVLEGSTSTCGGVSNMQPILRALTAAFFLNAARLN 837 Query: 639 ADK-QEYTGARNARFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 T N + P S + PPK ++ ELV T++ + R IDP+W+ Sbjct: 838 RGGDGYRTLKNNMTVYVHPSSVVKGMDPPPKVIIYHELVVTTKEFVRSVIPIDPKWLTEF 897 Query: 696 AQHLIKRTYSE 706 H E Sbjct: 898 GGHYYDAKDVE 908 >UniRef50_Q0RE57 ATP dependent RNA helicase n=10 Tax=Bacteria RepID=Q0RE57_FRAAA Length = 1549 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 370/712 (51%), Positives = 484/712 (67%), Gaps = 30/712 (4%) Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK-------------- 663 + R +H ALLTGLLSHIG D +++EY GAR +RF ++PGS + + Sbjct: 839 DPRAVHRALLTGLLSHIGRYDPERREYAGARGSRFMLWPGSAMARGRGRADRAAAADAAI 898 Query: 664 --------------PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHW 709 PP WVM AELVETSRLWGR AARIDP+W+EP+A HL+ R+YSEP W Sbjct: 899 DATGPDAPRQRPSGPPAWVMAAELVETSRLWGRTAARIDPDWIEPLAGHLVHRSYSEPRW 958 Query: 710 ERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFREN 769 R QGAV+A E+VT+YG+PIVA R V YS+IDPALCRELFIRHALVEGDWQTRH FF+ N Sbjct: 959 SRRQGAVLADERVTLYGVPIVAGRPVQYSRIDPALCRELFIRHALVEGDWQTRHEFFQHN 1018 Query: 770 LKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLN 829 +L A+ EELEH++RRRDI+VDDE LF FY +RI DV+S RHFD+WW+K R +PDLL+ Sbjct: 1019 QRLLADAEELEHRARRRDIVVDDEVLFGFYAERIPADVVSVRHFDAWWRKARRGSPDLLD 1078 Query: 830 FEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEES 889 F +S+L+ GA + + DYP+ W G L L LSYQFEPGA ADGVTVHIPLP+LNQV Sbjct: 1079 FPRSLLVSAGAGDVRETDYPDVWRLGELALPLSYQFEPGAAADGVTVHIPLPVLNQVSAE 1138 Query: 890 GFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRR 949 GFEWQ+PGLR ELV ALI+ LPK VRR+FVPAPNYA A L + P + PLL ++E ELRR Sbjct: 1139 GFEWQVPGLREELVTALIRGLPKVVRRSFVPAPNYARAVLTHLTPGQAPLLVAVEHELRR 1198 Query: 950 MTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVAD 1009 M G + R+ W VPDHL+ITFRV D + L EG+ L +K L+ + +E ++A A Sbjct: 1199 MGGPEIPRDSWSLAAVPDHLRITFRVEDARGAVLAEGKDLDAIKQRLRPRTREAVAAAA- 1257 Query: 1010 DGIEQSGLHIWS-FGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWN 1068 DG+E++GL W G LP E +RG + VKA+PALVDE +VA++ D EQ+QAMW Sbjct: 1258 DGVERTGLRSWDGVGSLPRVVELRRGGHVVKAFPALVDEGSTVAVRATDTETEQRQAMWA 1317 Query: 1069 GLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPV 1128 G RRL+LL + SPI+ L+ +L N AKL L NP+ +L+DDC+ D+LI A GGP Sbjct: 1318 GTRRLVLLGVASPIRGLNGRLSNAAKLALSHNPHRDAADLLDDCVRAAADRLITAAGGPA 1377 Query: 1129 WTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQ 1188 W E GF AL VRA L + + ++V+Q+L ++ L+ +A ++D + Q Sbjct: 1378 WDEAGFTALLAAVRAGLPEASFAVVREVQQVLALSHTVDLALRDLRAPALAASVADARGQ 1437 Query: 1189 MGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI 1248 + L+YRGFVT G RL D RYL A+E+RLE+L DP RDR V ++A+++ + Sbjct: 1438 LDALIYRGFVTDTGADRLADLARYLTALERRLERLPRDPGRDRINTATVGRAREAYRELL 1497 Query: 1249 NKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG 1300 +P R E+++ IRWM+EELRVS FAQ L TPYP+S++R+ +A++ + G Sbjct: 1498 ATVPAGREPGEEIRRIRWMLEELRVSLFAQNLRTPYPVSEERVYRAIDTLLG 1549 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 232/395 (58%), Positives = 286/395 (72%), Gaps = 45/395 (11%) Query: 269 DTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLS 328 + ERDQ QAI DAVDEL E GDIL+F+SGEREIRDTA+AL + +TEI+PLYARLS Sbjct: 352 EPERDQTQAISDAVDELCAEGPGDILVFLSGEREIRDTAEALAREQRPNTEIVPLYARLS 411 Query: 329 NSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 EQ+RVFQ H+GRR+VLATNVAETSLTVPGI+YVIDPGTARISRYS+RTKVQRLPIEP+ Sbjct: 412 AGEQHRVFQPHTGRRVVLATNVAETSLTVPGIRYVIDPGTARISRYSHRTKVQRLPIEPV 471 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 SQASANQRKGRCGR ++GICIRLYSE+DF RPEFTDPEILRTNLASVIL+M LGLGD+ Sbjct: 472 SQASANQRKGRCGRTADGICIRLYSEEDFAGRPEFTDPEILRTNLASVILRMADLGLGDM 531 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA--------------------------- 481 A F F++ PD R I DG LL ELGA Sbjct: 532 ATFGFLDPPDPRQISDGELLLTELGAFDAGGTGPGRPVADAPAPDGTGASGTDAGAPVQG 591 Query: 482 ------------------SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 + ++TP+GR+L+Q+PVDPRLARMVL + GC+RE ++I + Sbjct: 592 GTGTSGAGASAARAGGTGTGRRITPIGRRLAQIPVDPRLARMVLAGDEQGCLREVLVIAA 651 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 AL+IQDPR+RP++ QQA+DE+H RF D SDFLA++NLWNYL + + LS+N FRR+CRT Sbjct: 652 ALAIQDPRDRPVEHQQAADERHARFADPTSDFLAYLNLWNYLRDARGELSANQFRRMCRT 711 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE 618 ++LNYLR+REWQD++ QL V + LG+ ++ + Sbjct: 712 EFLNYLRIREWQDVHGQLAAVARGLGLNADARAGD 746 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 170/266 (63%), Positives = 209/266 (78%), Gaps = 3/266 (1%) Query: 11 ALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPE 70 L RL L D R RRL ++ + P A+Q + +A + D+AA +V R A P Sbjct: 32 ELSARLAELGPGDAHRLGRRLADTRRTREPAARQRALRAIAADTDRAAARVARRRANVPA 91 Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 ++YP+ LPV+Q+K +IL AIRDHQVVI+AGETGSGKTTQLPKIC+ELGRG++G+IGHTQP Sbjct: 92 LSYPEILPVTQRKDEILAAIRDHQVVIIAGETGSGKTTQLPKICLELGRGVRGMIGHTQP 151 Query: 131 RRLAARTVANRIAEELKTE---PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 RR+AARTVA+RIAEEL T GG +GY+ RF+D V D+T+VKLMTDGILLAEI DR Sbjct: 152 RRIAARTVADRIAEELGTPSPQAGGVVGYQTRFTDQVHDDTLVKLMTDGILLAEISSDRS 211 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L +YDT+IIDEAHERSLNIDF+LGYL+ LLPRRPDLK++ITSATI+ RFS HF +AP+I Sbjct: 212 LRRYDTLIIDEAHERSLNIDFILGYLRSLLPRRPDLKVVITSATIETARFSAHFGDAPVI 271 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERD 273 EVSGRTYPVEVRYRP+V A DT+ + Sbjct: 272 EVSGRTYPVEVRYRPLVPGARDTDPN 297 >UniRef50_Q6CF95 YALI0B09053p n=1 Tax=Yarrowia lipolytica RepID=Q6CF95_YARLI Length = 1077 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 222/741 (29%), Positives = 361/741 (48%), Gaps = 49/741 (6%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVK---------------KVKNPDAQQAIFQE 49 + L +R S +++DR + R VK K + ++ Sbjct: 316 VQSDLAILAKR-GSQLVKDRRQLRERAKQVKDASSTQGTVLGLVDEKKAEETKAEVKKEK 374 Query: 50 MAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQ 109 + + + + LP + +L+ I+ +QV IV GETGSGKTTQ Sbjct: 375 LIEVKTEVKEDPEVESKPLTPKEARTLLPAFAVRDPLLQVIQSNQVTIVIGETGSGKTTQ 434 Query: 110 LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM 169 L + E G +G+IG TQPRR+AA +VA R+++E++ G +GY +RF DH S T Sbjct: 435 LTQYLYEAGYAERGMIGCTQPRRVAAMSVAQRVSQEMEVRVGQEVGYAIRFEDHTSPATK 494 Query: 170 VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITS 229 +K +TDGILL E D L Y +I+DEAHER+LN D LLG + +L +R DLK+I+TS Sbjct: 495 IKYLTDGILLRETLTDPTLDNYSCVIMDEAHERALNTDILLGLFRTILAKRRDLKLIVTS 554 Query: 230 ATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES 289 AT++ +RFS F AP + GRTYPV V + D + A V + S Sbjct: 555 ATMNSKRFSDFFGGAPTFTIPGRTYPVSVHH------ERAPVDDYVAAAVKKVLSIHVSS 608 Query: 290 H---GDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQNRVF--QS 338 GDIL+FM+G+ +I T + L + N ILP+++++ QN++F Sbjct: 609 EVSTGDILVFMTGQEDITVTCEVLEERLQKDLDNPAPLMILPIFSQMPADLQNKIFNKAP 668 Query: 339 HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398 R+ ++ATN+AETSLTV GI +V+D G +++ YS +T + L + PIS A A QR G Sbjct: 669 PGVRKCIVATNIAETSLTVDGITFVVDAGYSKLKVYSPKTGMDSLQVAPISVAQAVQRSG 728 Query: 399 RCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 R GR ++G RLY+E PEI RTNLA+ +L + ++G+ D+ F F++ P Sbjct: 729 RAGRTAKGTAYRLYTEHAEREEMYPTAIPEIQRTNLANTLLLLKSVGVTDLMKFAFMDPP 788 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 K I + L LGA+ + +T LG ++SQ P+DP L ++++++ +GC +E Sbjct: 789 PKDTIMASLYELWSLGAVD-----NLGNITQLGMKMSQFPMDPCLGKILIKSVDYGCSKE 843 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAF 577 + + + L + RP ++QQ +D +F ESD L ++++ +K Sbjct: 844 MLSVVAMLCVPTVFYRPPERQQEADSAREKFFVPESDHLTLLHVYTQWLHNKK------S 897 Query: 578 RRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMK 637 C +L+ + + ++ QL Q++ + ++S ++ + + G Sbjct: 898 PVWCAKHFLHAKALEKAHEVREQLEQIMTTNKMHIDSCGTDWDLLRKCICAGFFHQAARV 957 Query: 638 DADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 + P S L+ P +V+ EL+ TS+ + +DP W+ Sbjct: 958 HGLGSYRNLRTLVSTQLHPTSALYGLGYLPAFVVYHELILTSKEYMSCVTSVDPAWLAEF 1017 Query: 696 AQHLI--KRTYSEPHWERAQG 714 K + + R + Sbjct: 1018 GSCFYVLKDRTGKVDFSRKRA 1038 >UniRef50_A5DRX8 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DRX8_LODEL Length = 1141 Score = 814 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 222/752 (29%), Positives = 366/752 (48%), Gaps = 64/752 (8%) Query: 1 MTEQQKLTFTALQQRLDSLM-----LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEID 55 + Q + + ++ + R + + + ++ D Sbjct: 338 LAVQNQRSKQERAKQAKESTGTGSNSTTSHKELRDMEANPETVRDGKNAKTREGDREKED 397 Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 A + + +LP K D++ IRD+QV I+ GETGSGKTTQL + Sbjct: 398 DDADDDDEKVDYESIMEQRRSLPAFAVKDDVVATIRDNQVTIIIGETGSGKTTQLTQYLY 457 Query: 116 ELGRGIK-----------------GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKV 158 E G +I TQPRR+AA +VA R++EE+ + G +GY V Sbjct: 458 EAGLAHNADEAGQGSGLGVAGQEKKMIACTQPRRVAAMSVAKRVSEEMGVKLGAEVGYSV 517 Query: 159 RFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP 218 RF D S++T++K MT+GILL EI D LL+ Y II+DEAHERSLN D LLG K LL Sbjct: 518 RFDDKTSNSTLIKYMTEGILLREILADPLLLDYSCIIMDEAHERSLNTDILLGLFKGLLA 577 Query: 219 RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAI 278 RR DLK+I+TSAT++ +RF+R F AP + GRT+PV+V + V D +++ Sbjct: 578 RRRDLKLIVTSATMNADRFTRFFGAAPQFTIPGRTFPVDVYFNRNVSM------DYVESA 631 Query: 279 FDAVDELSQE---------SHGDILIFMSGEREIRDTADALNK-----LNLRHTEILPLY 324 + + + GDIL+FM+G+ +I T D L + N ++LP+Y Sbjct: 632 VKQILSIHLGSMAGKLEFVNDGDILVFMTGQEDIEITCDILCEKLAMLENPPPLDVLPIY 691 Query: 325 ARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 + + Q ++F+ + R++V+ATN+AETSLTV GIKYVID G ++ Y+ + + Sbjct: 692 STMPPEMQKKIFRKKNLARRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDT 751 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS--RPEFTDPEILRTNLASVILQM 440 L + P+S A+A+QR GR GR S G+ RLY+E+ S PEI RTNL++ +L + Sbjct: 752 LQVVPVSLANADQRSGRAGRTSAGVAYRLYTENATSSKCMYAQPIPEIQRTNLSNTMLLL 811 Query: 441 TALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDP 500 +L + DI FPF++ P K + + L + A+ + +LT LG ++ Q P++P Sbjct: 812 KSLNVKDINNFPFLDPPPKDLLNCSLYDLWAIDALD-----NYGELTKLGLEMVQFPIEP 866 Query: 501 RLARMVLEA--QKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAF 558 L++++L + + C + + I + LS+ + R ++ + SD +F +SD L Sbjct: 867 TLSKLILLSTQPEFHCSEDIVTIVAMLSVSNIFFRSKERAKESDLAREKFVVADSDHLTL 926 Query: 559 VNLWNYLGEQQKALSSNAFR--RLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 616 +N++ K +N + + C ++L + ++I QL Q++ + +P+ Sbjct: 927 LNVYTQWEVNVKKFGNNWTKLTQWCEKNFLQLKSLHRAKEIRRQLVQIMHKNKLPLLKSY 986 Query: 617 AEYREIHIALLTGLLSHIGMKDADK----QEYTGARN--ARFSIFPGSGLFKKPP--KWV 668 + ++ L E+ R+ + + P S L +V Sbjct: 987 HD-DDVRKCLCATFYHQAAKLIKTNVNGSPEFINLRHSYMKMYLHPTSSLLDSNMGLNYV 1045 Query: 669 MVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 + ELV TS+ + ++P W+ Sbjct: 1046 VYHELVLTSKEYMNYVTCVEPTWLLEYGYKFY 1077 >UniRef50_A5AMC2 Putative uncharacterized protein n=2 Tax=Eukaryota RepID=A5AMC2_VITVI Length = 855 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 211/714 (29%), Positives = 358/714 (50%), Gaps = 54/714 (7%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 M + ++ + +L ++ ++ + + + A+ + + Sbjct: 122 MNKSRQRFWELAGSKLGDILGVEKTAEQIDADTAVVGEEGEVDFKEDAKFAQHLKKDEAV 181 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 ++ + LP+ ++++L+ IR++QVV+V GETGSGKTTQL + E G Sbjct: 182 SEFAKS-KTLAEQRQYLPIYSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLHEDGYT 240 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 G++G TQPRR+AA +VA R++EE++TE G +GY +RF D NT +K MTDG+L+ Sbjct: 241 TNGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIRFEDVTGPNTKIKYMTDGVLMR 300 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E +D L +Y +++DEAHERSLN D L G LK+++ +R D K+I+TSAT++ ++FS Sbjct: 301 ETLKDSELDKYRVVVMDEAHERSLNTDVLFGILKKVVAQRRDFKLIVTSATLNAQKFSNF 360 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 F + PI + GRT+PV + Y D ++ G + M+G Sbjct: 361 FGSVPIFHIPGRTFPVNILYS------KTPCEDYVE--------------GAVKQAMTG- 399 Query: 301 REIRDTADALNKLNLRHTEILPLY-ARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTV 357 L+ LY +L Q ++FQ R+ ++ATN+AETSLTV Sbjct: 400 --------CLSSQYS-------LYTPQLPADLQAKIFQKAEDGARKCIVATNIAETSLTV 444 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 GI YVID G ++ Y+ R + L + P+S+A+A+QR GR GR G C RLY+E + Sbjct: 445 DGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAY 504 Query: 418 -LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 PEI RTNL +V+L + +L + ++ F F++ P + NI + + L LGA+ Sbjct: 505 LNELLASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQLWVLGALN 564 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD 536 + LT LG ++ + P+DP LA+M+L ++ C+ E + I S LS+ RP D Sbjct: 565 -----NVGGLTELGWKMVEFPLDPPLAKMLLIGEQLECINEVLTIVSMLSVPSVFFRPKD 619 Query: 537 KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQD 596 + + SD +F ESD L +N++ Q C +L+ +R+ ++ Sbjct: 620 RAEESDAAREKFFVPESDHLTLLNVYQQWKANQ------YRGDWCNDHFLHVKGLRKARE 673 Query: 597 IYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + +QL ++K L IP+ S ++ + A+ + + + + P Sbjct: 674 VRSQLLDILKTLKIPLTSCGPDWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHP 733 Query: 657 GSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPH 708 S L+ P +V+ EL+ T++ + + A ++P+W+ + S+ Sbjct: 734 SSALYGLGYTPDYVVYHELILTAKEYMQCATAVEPQWLAELGPMFFSVKDSDTS 787 >UniRef50_UPI000186CCEB ATP-dependent RNA helicase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CCEB Length = 695 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 223/664 (33%), Positives = 365/664 (54%), Gaps = 31/664 (4%) Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 Q+ ++ + LPV +Q ++ I H+++I+ GETG GKTTQ+P+ Sbjct: 43 QSPSAKSSPTNSKSILEQRQGLPVYNARQRLINLIEKHEILIIIGETGCGKTTQIPQFIF 102 Query: 116 ELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 E +IG TQPRR+AA T++ R+AEE+ T G +GY +RF D S NT +K +TD Sbjct: 103 EERINGSKMIGVTQPRRVAATTLSARVAEEMNTVLGETVGYSIRFEDLTSHNTKIKFLTD 162 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD-----LKIIITSA 230 G+LL E D LMQY+ II+DEAHER+++ D L G +K+ R + LK+II SA Sbjct: 163 GMLLREAILDDKLMQYNFIILDEAHERTIHTDVLFGIIKKAHKTRKERGLPILKVIIMSA 222 Query: 231 TIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH 290 T+D + FS +F + P++ + GR Y VEV + A ++ D L + V ++ QE+ Sbjct: 223 TMDVDHFSSYFGDVPVVYLEGRQYSVEVLH------AVQSQDDYLFSSLVTVFQIHQEAP 276 Query: 291 --GDILIFMSGEREIRDTADALN------KLNLRHTEILPLYARLSNSEQNRVFQ--SHS 340 DIL+F++G+ EI A + + ++LPLY+ L + + F+ H Sbjct: 277 PNEDILVFLTGQEEIESFAFKVKSIVKDLENMTPPLKVLPLYSSLPSLQLAEAFKPTPHG 336 Query: 341 GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC 400 R+IV++TN+AETS+T+PGIKYVID G + ++ T + L + ISQA A QR GR Sbjct: 337 LRKIVISTNIAETSVTIPGIKYVIDSGKVKAKMFNPITGLDMLQVRTISQAQAWQRSGRA 396 Query: 401 GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 GR S G C R++++D+F + + PEILR NLASV LQ+ LG+ +I F F++ P K Sbjct: 397 GRDSSGHCYRIFTKDEFDKFDKNSQPEILRCNLASVSLQLLTLGI-NILNFDFMDKPPKE 455 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 +++ + L+ LGAI E+ +LT LG+Q++Q P+DPR ++++L A +GC+ E + Sbjct: 456 SLKSALTELKLLGAIDCVEKP---QLTKLGKQMAQFPIDPRYSKILLSAIDYGCLDEIIT 512 Query: 521 ITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 I + LS + + K+ + E H++F D + +N++ + + ++ Sbjct: 513 IIALLSGESVLIHSLTKRDEAKEAHKKFLSSSGDHITLLNVFRNFKKM------SQQKQW 566 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAD 640 C ++L++ + ++ QL ++ K I + S + +I L+TGL ++ D Sbjct: 567 CHENFLHFRNLVYASNVRKQLVEICKRNDITITSCNSNIDQIRKCLVTGLFMNVAELQLD 626 Query: 641 KQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 K+ + SI P S L P V+ +E+V T++ + R IDP+W+ Sbjct: 627 KKYMMLSTRQMVSIHPTSVLGGTLPHCVLFSEVVHTTKCYIRQLTVIDPDWLTETMPEYF 686 Query: 701 KRTY 704 ++ Sbjct: 687 RQHR 690 >UniRef50_P15938 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=7 Tax=Saccharomycetaceae RepID=PRP16_YEAST Length = 1071 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 237/728 (32%), Positives = 373/728 (51%), Gaps = 54/728 (7%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + +++ +QQ D+ + + + V ++N + + + + Sbjct: 284 LVALRRINMEHIQQSRDNTTV-----LNTAMGEVLGLENNNKAKDKSNQKICD-----DT 333 Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 L + + LPV + + +L IR++QVV++ GETGSGKTTQL + E G Sbjct: 334 ALFTPSKDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYA 393 Query: 121 --IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHV-SDNTMVKLMTDGI 177 I TQPRR+AA +VA R+A E++ G +GY +RF D S+ T +K +TDGI Sbjct: 394 NDRGKSIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGI 453 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LL E D L +Y +IIDEAHERSLN D LLG+ K LL RR DLK+IITSAT++ ++F Sbjct: 454 LLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKF 513 Query: 238 SRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS---QESHGDIL 294 S F NAP + GRT+PV+ Y + +D ++A ++ S GDIL Sbjct: 514 SAFFGNAPQFTIPGRTFPVQTIY------TSNPVQDYVEAAVSQAVKIHLANDCSSGDIL 567 Query: 295 IFMSGEREIRDTADALNK---------------LNLRHTEILPLYARLSNSEQNRVFQS- 338 IFM+G+ +I T D L + + EILP+Y+ L Q ++FQ Sbjct: 568 IFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDL 627 Query: 339 -HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 + R+I++ATN+AETSLT+ GI+YVID G +++ Y+ + + L I PIS+A+A+QR Sbjct: 628 HGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRS 687 Query: 398 GRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGD-IAAFPFVE 455 GR GR + G RLY+ED F T PEI RTNL++ +L + +L + D ++ FPF++ Sbjct: 688 GRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFID 747 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 P + + L +GAI ++ +LTPLG Q+++ P+ P L++++L A ++GC Sbjct: 748 KPPLQTFLSSLYELWFIGAID-----TSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCS 802 Query: 516 REAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN 575 E + I S LS+ RP ++Q+ +D +F +SD L +N++ +N Sbjct: 803 DEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRA------NN 856 Query: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 635 C ++ Y + +DI QL ++K IPV S ++ I + +G Sbjct: 857 FSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAA 916 Query: 636 MKDADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 + + P S L P +V+ EL+ TS+ + +DP W+ Sbjct: 917 KITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLM 976 Query: 694 PVAQHLIK 701 L Sbjct: 977 EYGGLLYD 984 >UniRef50_A9C368 ATP-dependent helicase HrpA n=13 Tax=cellular organisms RepID=A9C368_DELAS Length = 1391 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 277/784 (35%), Positives = 419/784 (53%), Gaps = 55/784 (7%) Query: 566 GEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIA 625 E LS+ + +L R +++N RVREW+DI++QL VV E +N+EPA Y +H++ Sbjct: 612 DEPSHKLSNRQWEQLLRQNFINIRRVREWRDIHSQLLTVVNEHKWKINTEPAGYDAVHLS 671 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 +L+GLL ++G K + Y GAR RF PG+ L KKP +W++ AELVETSRL+GR A Sbjct: 672 MLSGLLGNLGYKGDESDAYLGARGIRFYPHPGAHLSKKPGRWIVAAELVETSRLYGRGIA 731 Query: 686 RIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALC 745 IDP+W+E V HL+K+ +PHW + Q V+A E+ T+YGL + R+++Y +IDP Sbjct: 732 AIDPQWLEEVGAHLLKKQLLDPHWSKNQADVVALERATLYGLVVYNGRRMSYGRIDPQSA 791 Query: 746 RELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISH 805 RE+FIR ALVEG W TR F NLKL +VEELEHKSRR+D+LVDDE ++ FYDQ+I Sbjct: 792 REIFIRQALVEGQWDTRWHFLPANLKLVRKVEELEHKSRRQDVLVDDELIYAFYDQQIPK 851 Query: 806 DVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQF 865 DV S FD W+++ ++E DLL + L++ A I+ +P G + SY Sbjct: 852 DVFSGATFDHWFREAAKENADLLRLSRDELMRHEAAGITTQAFPKVVKLGGVDCTASYLH 911 Query: 866 EPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYA 925 PG DG+TV +PL +LNQV + EW +PG+ ++ + AL+KSLP+ R FVP P A Sbjct: 912 SPGDARDGITVTVPLFVLNQVSDERVEWLVPGMLKDKLQALLKSLPQRPRSRFVPLPESA 971 Query: 926 EAFLGRV----KPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNK 981 + + + L+D+L +++R T + V R D+ D + HL + FR+ D+ + Sbjct: 972 QRLAELFTTPERWGQGSLIDALLKQVRDETSLDVKRADFKLDMLSPHLFMNFRITDEHGR 1031 Query: 982 KLKEGRSLQDLKDALKGKVQETLSAVA--------------------------------- 1008 +L +GR+L LK L K + A+A Sbjct: 1032 QLGQGRNLGALKAELGAKARGAFQALAALKVASVTEAPAPAANAATAPETGRKPAPAAKA 1091 Query: 1009 -------------DDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKL 1055 S WSFG+LPE E RG + +PAL+D D+V I++ Sbjct: 1092 EKPDQATPARNAKPSQPADSRYKEWSFGELPELMEIGRGGQTLIGFPALIDHGDAVGIEV 1151 Query: 1056 FDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISC 1115 FD P GLRRL L I +KYL + +P+ K+ + + P G EL + I Sbjct: 1152 FDEPEVAAARHRVGLRRLFALQIRDALKYLEKNIPDLQKMAVAYMPLGTQEELREQIIDV 1211 Query: 1116 GVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVD 1175 +D+ P + F + R L ++A+ IL +++K + Sbjct: 1212 AIDRAFLQEPLPT-NDAQFKQRVQDGRGRLTLIANEVARMASTILVEYAAAQRKIKDTKN 1270 Query: 1176 MTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQML 1235 +D Q+ LV + F+ + +L RYL+AI RL+K DP RD +++ Sbjct: 1271 AP--DATADAAQQLQRLVPKNFIAAAPWTQLQHYARYLKAITSRLDKYRADPARDASRLT 1328 Query: 1236 KVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAM 1295 ++ ++Q + + + + D ++E RWM+EELRVS+FAQ+L TPYP+S KR+ + Sbjct: 1329 ELRPLEQRYWRLVAE--RKGHIDARMQEYRWMLEELRVSFFAQELRTPYPVSIKRLDKVW 1386 Query: 1296 EQIS 1299 +Q+ Sbjct: 1387 QQLQ 1390 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 311/532 (58%), Positives = 397/532 (74%), Gaps = 30/532 (5%) Query: 70 EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-------- 121 +I++P++LPVS ++++I+EA+ HQV+IV GETGSGKTTQLPKI + LGRG Sbjct: 36 KISFPESLPVSARREEIMEAMDRHQVIIVCGETGSGKTTQLPKIALALGRGKVNATPDDK 95 Query: 122 ----KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 LIGHTQPRR+AA +VA RIAEEL T G +GYKVRF D +S + VKLMTDGI Sbjct: 96 GQVRGHLIGHTQPRRIAASSVAKRIAEELNTPLGDVVGYKVRFQDRLSKDASVKLMTDGI 155 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LLAE Q D LL YDT+IIDEAHERSLNIDFLLGY+K++LPRRPDLK+++TSATID ERF Sbjct: 156 LLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYIKQILPRRPDLKVVVTSATIDAERF 215 Query: 238 SRHF----NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES-HGD 292 SRHF AP+I VSGRTYPVE+R+RP + + D AI + VDEL GD Sbjct: 216 SRHFEGPKGPAPVIMVSGRTYPVEMRWRP---FEEKRDHDLNDAIAEGVDELWAGGVSGD 272 Query: 293 ILIFMSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLA 347 IL+F+ GEREIR+ AD L K LRH E+LPL++RLS +EQ+R+F SH+GRRIVLA Sbjct: 273 ILVFLPGEREIREAADHLRKHLAQQPVLRHAEVLPLFSRLSQAEQDRIFDSHTGRRIVLA 332 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TNVAETSLTVPGI+YVID GTAR+ RYS+R+KV++L +EPISQA+ANQR GRCGRV+ GI Sbjct: 333 TNVAETSLTVPGIRYVIDAGTARVKRYSFRSKVEQLLVEPISQAAANQRAGRCGRVANGI 392 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 CIRLY E DF +R FTDPEILR++LA VIL+M +LGLGD+ FPF+EAP R I DG + Sbjct: 393 CIRLYDEADFGTRARFTDPEILRSSLAGVILRMKSLGLGDVVNFPFLEAPSGRAIADGYQ 452 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL ELGA+ +L P+GR+LS+LP+DPR+ RM+LEA+ G V E ++I SALS+ Sbjct: 453 LLGELGAVDE-----RGELLPMGRELSRLPLDPRVGRMILEARTRGAVAEVLVIASALSV 507 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR 579 QD R+RP++ QQ +D++H +F D++S+F ++ LW +L + + R+ Sbjct: 508 QDVRDRPLEAQQQADQQHAKFDDEKSEFSGYLRLWKWLQDARGGKVVAKSRK 559 >UniRef50_B9WL64 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=7 Tax=Saccharomycetales RepID=B9WL64_CANDC Length = 1050 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 221/726 (30%), Positives = 355/726 (48%), Gaps = 54/726 (7%) Query: 17 DSLMLRDRLRFSRRLHGVKKVKNPD--AQQAIFQEMAKEIDQAAGKVLLREAARPEITYP 74 + R+R ++ G+ +E + + + Sbjct: 273 NRRSKRERALQAKEAAGIDNSNIGSIIDTHNTKKEEEQPKGKNLNNNETTTTYQDIQQQR 332 Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK-------GLIGH 127 LP + D+L IRD+QV IV GETGSGKTTQL + E G G +I Sbjct: 333 KLLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGSNIDKNGEKKIIAC 392 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS-DNTMVKLMTDGILLAEIQQDR 186 TQPRR+AA +VA R++EE+ + G +GY +RF D + T++K MT+GILL EI D Sbjct: 393 TQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTNNKKTIIKYMTEGILLREILVDP 452 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 LL+ Y II+DEAHERSLN D LLG K LL +R DLK+IITSAT++ RF++ F AP Sbjct: 453 LLINYSCIIMDEAHERSLNTDILLGLFKNLLSKRKDLKLIITSATMNANRFTKFFGAAPQ 512 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-----------QESHGDILI 295 + GRT+PVE+ + D D ++ + + + GDIL+ Sbjct: 513 FHIPGRTFPVEIFF------NRDVNMDYVEMAVKQILTIHLGRWNINATNGNGNDGDILV 566 Query: 296 FMSGEREIRDTADALNK-----LNLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLAT 348 FM+G+ +I T D + + + +I P+Y+ + Q ++F + R++V+AT Sbjct: 567 FMTGQEDIEITCDLIKEKLDLLEDPPPLDIYPIYSTMPQDLQKKIFNKMNLQRRKVVVAT 626 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLTV GIKYVID G ++ Y+ + + L + PIS A+A+QR GR GR GI Sbjct: 627 NIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQMVPISLANADQRSGRAGRTGAGIA 686 Query: 409 IRLYSED--DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGV 466 RLY+E D + PEI R+NL++++L + +L + DI +FPF++ P K + + Sbjct: 687 YRLYTEKATDPNNMYIQPIPEIQRSNLSNIMLLLKSLKINDINSFPFLDPPPKDLLNCSL 746 Query: 467 RLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA--QKHGCVREAMIITSA 524 L +GA+ + +LT LG+ + Q P++P LA+++L + + C E + I + Sbjct: 747 HDLWAIGALD-----NLGQLTKLGQSMIQFPIEPTLAKLILLSTQSEFHCSEEIITIVAM 801 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFR--RLCR 582 LS+ + RP ++ +D +F ESD L +N++N + + C Sbjct: 802 LSVPNIYNRPKERSNEADMAREKFIISESDHLTLLNIFNQWEINLNKFKGDYNKINNWCN 861 Query: 583 TDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA--- 639 ++L + +DI QL+ ++++ + + + I L Sbjct: 862 KNFLQLKSLYRVKDIKYQLKLIMQKNKLTILKSKNDND-IRKCLCASFYQQSAKLIKMNL 920 Query: 640 -DKQEYTGARN--ARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEP 694 + E+ R+ + + P S L +V+ EL+ T + + +DP W+ Sbjct: 921 NGQPEFINLRHSYMKMFLHPTSCLLDSNLSTNYVIYHELILTKKEYMNYVTTVDPIWLLE 980 Query: 695 VAQHLI 700 Sbjct: 981 YGYKFF 986 >UniRef50_Q5ANN5 Likely spliceosomal DEAD box ATPase n=3 Tax=Eukaryota RepID=Q5ANN5_CANAL Length = 865 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 228/658 (34%), Positives = 360/658 (54%), Gaps = 51/658 (7%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQP 130 +LPV +++ L+ I ++Q +IV GETGSGKTTQLP+ E G I TQP Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQP 283 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLM 189 RR+AA +VANR+A E++ + G +GY +RF D+ D T++K +TDG+LL E QD L Sbjct: 284 RRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLG 343 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSATIDPERFSRHFNNAPII 247 +Y I+IDEAHER+L+ + LL LK+++ R+ DLKIII SATI+ E+FS+ FNNAPI+ Sbjct: 344 KYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPIL 403 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGEREIRD 305 + GR +PV++ Y E + +QA + ++ GDIL+F++G+ EI Sbjct: 404 NIPGRRFPVKIHY------TKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIET 457 Query: 306 TADALNKLNLR------HTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTV 357 + L L+ + +YA L Q ++FQ + R+IVLATN+AETS+T+ Sbjct: 458 MEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITI 517 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-DD 416 GI YVIDPG + + Y+ T ++ L + P S+ASA+QR GR GRV G C RL+++ Sbjct: 518 DGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSF 577 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 + PEI R NL SVIL + +LG+ D+ F F++ P K I + LL LGA+ Sbjct: 578 YNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALN 637 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPM 535 T KLT G+++S+ P+DP + +L + K ++ + I + L+ + RP Sbjct: 638 TQG-----KLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPK 692 Query: 536 DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ 595 DK++ +D++ + F+D + D + +W + S + C+ ++ Y ++ + Sbjct: 693 DKKELADKRKQEFNDLQGDQFMLLKIWQQWVD------SGYSVQWCQDYFIQYKTMKRIK 746 Query: 596 DIYTQLRQVVKELGIPVNSEPAEYREIH----------IALLTGLLSHIGMKDADKQEYT 645 +IY QL ++ K++GI VNS + L++G ++I Y Sbjct: 747 NIYEQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQ 806 Query: 646 ------GARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 G N I P S ++ K PK+++ ELV TS+ + R +D + ++ Sbjct: 807 KLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIKEY 864 >UniRef50_C0W5B9 Putative uncharacterized protein (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W5B9_9ACTO Length = 780 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 355/780 (45%), Positives = 487/780 (62%), Gaps = 77/780 (9%) Query: 291 GDILIFMSGEREIRDTADAL------------NKLNLRHTEILPLYARLSNSEQNRVFQS 338 GDIL+F++GER+IRDT AL E++PLY+RL+ +EQ+RVF++ Sbjct: 1 GDILVFLAGERDIRDTESALIDHLGPRYTMDGRTRTPGAVEVVPLYSRLTAAEQHRVFEA 60 Query: 339 HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKG 398 HS RRIVLATNVAETSLTVPGI+YVIDPG ARISRYS RTKVQRLPIEPISQASANQR G Sbjct: 61 HSCRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSNRTKVQRLPIEPISQASANQRSG 120 Query: 399 RCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPD 458 RCGRV++GI IRLYSE D+LSRPE+T+PEILRT+LASVILQM LGLG + FPF++APD Sbjct: 121 RCGRVADGIAIRLYSEADYLSRPEYTEPEILRTSLASVILQMANLGLGAVEDFPFLDAPD 180 Query: 459 KRNIQDGVRLLEELGAITTD------EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512 R ++DG++LL E+GAI + +LT +GR+L++LP+DPRL RM+L A + Sbjct: 181 HRAVRDGIQLLTEIGAIEPSMSGRSGRSSRGPRLTEVGRRLARLPIDPRLGRMLLRAGEL 240 Query: 513 GCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKAL 572 GC E M+I +ALSIQD RERP+DKQ+ +D HRRF D SDFL ++NLW YL Q + L Sbjct: 241 GCAGEVMVIVAALSIQDVRERPLDKQEQADALHRRFADPTSDFLTYLNLWRYLRTQSREL 300 Query: 573 SSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV-------------------- 612 S +AFRR+C+ ++L+YLRVREWQD++TQLRQ+ + LG+ Sbjct: 301 SGSAFRRMCKAEFLHYLRVREWQDVHTQLRQLSRPLGLDAAPVELPTARSIRAARQALEP 360 Query: 613 ---------------------NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNAR 651 +++ + IH +LL GLLS++G D ++EY+GAR R Sbjct: 361 GSHAAQIAHGDVAAAVVALGKSADTPDADAIHRSLLVGLLSNVGHWDERRREYSGARGTR 420 Query: 652 FSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH--LIKRTYSEPHW 709 F I+PGSGL +K WVM AELVETS L+ R A++D WVE A+ L+++ + EP+W Sbjct: 421 FMIWPGSGLRRKTYDWVMTAELVETSHLFARTVAKVDSRWVEETARQAGLLRQVFGEPYW 480 Query: 710 ERAQGAVMATEKVTVYGLPIVAARKVNYSQI----DPALCRELFIRHALVEGDWQTRHAF 765 G M EKV VYG+ + A R + + + RE+F+R LVEG W RH F Sbjct: 481 STKNGCAMVHEKVMVYGMTLAADRPATLASVGTPAAREVAREMFLRSGLVEGGWHARHGF 540 Query: 766 FRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETP 825 N L E+ ++E + R +L DE L+ FYD R+ +V A FD+WW++ P Sbjct: 541 VSRNRDLIEELSDVEQRRREHGLLASDEALYRFYDDRVPDEVTGANDFDAWWRREKGRHP 600 Query: 826 DLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQ 885 LL++ + +L+ E YP+ W QG+L L L Y FEPG DGV+V +P+ +L + Sbjct: 601 HLLDYTRELLLPGADEDSLAAGYPDAWVQGDLTLGLDYVFEPGQADDGVSVLVPVEVLGR 660 Query: 886 VEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKP----------L 935 +E +GF+W +PG+R ELV+A I++LPK VRR VPAP+ ++ Sbjct: 661 LEPAGFDWLVPGMRAELVVATIRALPKRVRRQLVPAPDVGAQVWAAMREEYQTPAGASAP 720 Query: 936 ELPLLDSLERELRRMTGVTVDREDWHWDQ--VPDHLKITFRVVDDKNKKLKEGRSLQDLK 993 ++ + R+ GV V DW Q +PDHL+++F +D + +++ G+ L L+ Sbjct: 721 PASFQEAFTAAVARLRGVEVTEADWAEAQEHLPDHLRVSFVALDSRGREIGRGKDLVALQ 780 >UniRef50_B9WE17 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=2 Tax=Candida RepID=B9WE17_CANDC Length = 866 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 226/658 (34%), Positives = 363/658 (55%), Gaps = 51/658 (7%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG-HTQP 130 +LPV +++ L+ I ++Q +IV GETGSGKTTQLP+ E G I TQP Sbjct: 225 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLYEAGYSQNNRIIACTQP 284 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLM 189 RR+AA +VA R+A+E++ + G +GY +RF D+ D TM+K +TDG+LL E QD L Sbjct: 285 RRVAATSVAKRVADEMQVKLGEQVGYNIRFDDNCKDGITMIKYVTDGMLLREFLQDPTLE 344 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELL---PRRPDLKIIITSATIDPERFSRHFNNAPI 246 +Y I+IDEAHER+L+ + LL LK+++ R+ DLKIII SATI+ E+FS+ FNNAPI Sbjct: 345 KYSVIMIDEAHERTLSTEILLSLLKDIIMTTTRKNDLKIIIASATINAEKFSKFFNNAPI 404 Query: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGEREIR 304 + + GR +PV++ Y E + +QA + ++ GDIL+F++G+ EI Sbjct: 405 LNIPGRRFPVKIHY------TKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIE 458 Query: 305 DTADALNKL------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLT 356 + L+ + + +YA L Q ++FQ + R+IVLATN+AETS+T Sbjct: 459 TMEEILHDSIVKLGDQINPMMVCSIYANLPQELQQKIFQQTPTNTRKIVLATNIAETSIT 518 Query: 357 VPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-D 415 + GI YVIDPG + + Y+ T ++ L + P S+ASA+QR GR GRV G C RL+++ Sbjct: 519 IDGISYVIDPGYVKQNVYNPITGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWS 578 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 + PEI R NL SVIL + +LG+ D+ F F++ P K+ I + LL LGA+ Sbjct: 579 FYNELDLNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKQAIIKALNLLYALGAL 638 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERP 534 + KLT +G+++S+ P+DP + +L + K ++ + I + L+ + RP Sbjct: 639 NSQG-----KLTKIGKKMSEFPLDPIFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRP 693 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 DK++ +D++ + F+D + D +N+W + S + C+ ++ Y ++ Sbjct: 694 KDKKELADKRKQEFNDSQGDQFMLLNIWQQWVD------SGYSVQWCQDYFIQYKTMKRI 747 Query: 595 QDIYTQLRQVVKELGIPVN--------SEPAEYREIHIALLTGLLSHIGMKDADKQEYT- 645 ++IY QL ++ +++GI VN + + L++G ++I Y Sbjct: 748 KNIYEQLIRLSRKIGIEVNNHQHPKESNNNDNCTLLTECLISGFFNNIVKLSPMGDCYQK 807 Query: 646 ------GARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 G N I P S L+ K PK+++ ELV TS+ + R +D + ++ Sbjct: 808 LTNGKNGNNNTPCYIHPSSCLYKLKPKPKYLLYYELVLTSKEYMRNCIILDEKLIKQY 865 >UniRef50_Q9H6R0 Putative ATP-dependent RNA helicase DHX33 n=37 Tax=Eumetazoa RepID=DHX33_HUMAN Length = 707 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 211/646 (32%), Positives = 350/646 (54%), Gaps = 29/646 (4%) Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 +LP+ Q + +L +R+ ++ GETGSGKTTQ+P+ E G +G+I TQPRR Sbjct: 70 QRRSLPILQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRR 129 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AA ++A R+++E +TE G +GY VRF D S++T +K +TDG+LL E D LL +Y Sbjct: 130 VAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTGIKFLTDGMLLREAISDSLLRKYS 189 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRP-----DLKIIITSATIDPERFSRHFNNAPII 247 +I+DEAHER+++ D L G +K RR LK+I+ SAT+D + FS++FN AP++ Sbjct: 190 CVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVL 249 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG--DILIFMSGEREIRD 305 + GR +P++V Y + D L A +V ++ QE+ DIL+F++G+ EI Sbjct: 250 YLEGRQHPIQVFY------TKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEA 303 Query: 306 TADALNKLN------LRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTV 357 + + +LPLYA L ++Q RVFQ R+++++TN+AETS+T+ Sbjct: 304 MSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITI 363 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 GIKYV+D G + +Y+ + ++ L ++ +S+ A QR GR GR GIC RLY+ED+F Sbjct: 364 TGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF 423 Query: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 + T PEI R NLASV+LQ+ A+ + ++ F F+ P +IQ + L+ LGA+ Sbjct: 424 EKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGAL-- 481 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 + + LTP+GR+++ P++P+ A+ +L + K C E + I S LS+ P + Sbjct: 482 EHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSR 541 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 ++ ++F E D + +N++ + C+ +++N + ++ Sbjct: 542 REEVQGVRKKFISSEGDHMTLLNIYRTFKNL------GGNKDWCKENFVNSKNMTLVAEV 595 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 QLR + ++ +P+ S + + L L D T + +I P Sbjct: 596 RAQLRDICLKMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPS 655 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 S LF P V+ EL+ T++ + R ID +W+ A +R Sbjct: 656 SVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFRRK 701 >UniRef50_A5DQ95 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DQ95_PICGU Length = 1084 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 215/718 (29%), Positives = 346/718 (48%), Gaps = 49/718 (6%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVS 80 R + +++ ++ + + KE+ + +LP Sbjct: 327 RRSKNERAKQAKDSSSLQGTALGNVLQIKEEKEVSATTSGAEEKVDKELIQKQRKSLPAF 386 Query: 81 QKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-------LIGHTQPRRL 133 + ++L I ++QV +V GETGSGKTTQL + +E G G +IG TQPRR+ Sbjct: 387 AVRHELLRTIAENQVTVVIGETGSGKTTQLTQFLLEDGFGSNLAKNGERLMIGCTQPRRV 446 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVS-DNTMVKLMTDGILLAEIQQDRLLMQYD 192 AA +VA R++EE + G +GY +RF D + + T++K MT+G+LL EI D L Y Sbjct: 447 AAMSVAKRVSEEYGCKLGEEVGYSIRFEDVTTKEKTIIKYMTEGVLLREILMDANLEHYS 506 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGR 252 II+DEAHERSL+ D LLG + L+ RR DLK+IITSAT++ ERF F + P + GR Sbjct: 507 CIIMDEAHERSLSTDVLLGLFRNLIRRRKDLKLIITSATMNAERFMNFFGDVPQFTIPGR 566 Query: 253 TYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-------QESHGDILIFMSGEREIRD 305 T+PV+ + T D + A V + + + GDIL+FM+G+ +I Sbjct: 567 TFPVDTLFS------KSTCSDYVDAAVKQVMTIHLQNYSKYKRNDGDILVFMTGQEDIEM 620 Query: 306 TADALNKL-----NLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVP 358 T + + + + ++ P+Y+ + Q ++F S R++V+ATN+AETSLTV Sbjct: 621 TCELVREKLALLDDPPPLDVYPIYSTMPADLQRKIFDKPSETRRKVVVATNIAETSLTVD 680 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDD-- 416 GIKYV+D G ++ Y+ + + L + PIS A+A QR GR GR G+ RLY+E Sbjct: 681 GIKYVVDTGLVKLKVYNPKLGMDTLQVVPISLANAQQRSGRAGRTGPGLAYRLYTERAIG 740 Query: 417 FLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIT 476 S PEI RTNL +V+L + +L + D+ FPF+++P + + + L + A+ Sbjct: 741 EDSMYIQPIPEIQRTNLTNVMLLLKSLKVEDVTKFPFLDSPPTDLLSNSLYDLWIMEALD 800 Query: 477 TDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQ--KHGCVREAMIITSALSIQDPRERP 534 + LT LG + P++ L++++ + + C E + I S LS+ RP Sbjct: 801 -----NCGNLTSLGHNMMVFPIEATLSKLIFLSCRPQFSCSSEIVTIVSMLSVPSVFFRP 855 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 ++ Q SD RF ESD L +N++N Q+ C ++L++ + Sbjct: 856 KERAQESDAARERFFVAESDHLTLLNVYNQYETQRSK--GRKTAAWCSKNFLHHKSLSRA 913 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA----DKQEYTGARN- 649 +DI QL ++K+ +P+ + I L YT R Sbjct: 914 RDIRNQLILIMKKNKLPI-LKSTNNDTIRKCLCAVYFHQSATLAKTDFNKGSVYTHLRQS 972 Query: 650 -ARFSIFPGSGL---FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 + P S L + V+ EL+ T++ + +DP W+ T Sbjct: 973 YMNMHLHPTSALNSGAEAMASHVIYHELILTTKEYMSCVTVVDPVWLLEFGAIFFDTT 1030 >UniRef50_Q9VR29 CG3225 n=19 Tax=Neoptera RepID=Q9VR29_DROME Length = 678 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 230/685 (33%), Positives = 358/685 (52%), Gaps = 34/685 (4%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 K P+ AI E Q++ V + + LP+ Q + IL + HQV Sbjct: 7 KFLKPETDDAITDSAGGE-QQSSAFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQV 65 Query: 96 VIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 VI+ GETGSGK+TQ+P+ E G KGLIG T+PRR++ T+ANR+A+E G +G Sbjct: 66 VILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVG 125 Query: 156 YKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKE 215 Y VRF + +S T +K MT+GILL E+ D LL QY II+DEAHER++ D +LG LK+ Sbjct: 126 YVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKK 185 Query: 216 LLPRRPDLKIIITSATIDPERFSRHFNNAPI------IEVSGRTYPVEVRYRPIVEEADD 269 +L +R LK+II+SATID FS F+ + + GR +PV Y ++ Sbjct: 186 ILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYL------NE 239 Query: 270 TERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL----NLRHTEILPLY 324 D ++ + V +L Q E GDIL F++G+ E+ + D L + + ++LP+Y Sbjct: 240 PCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMY 299 Query: 325 ARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 +S+++Q VF R++VLATN+AETS+T+PGI YVID G ++ Y+ +T Sbjct: 300 GSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDS 359 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTA 442 L I P+S+ASA QR GR GR+ G RLY++ D+ + PE+ R+ L+ ILQ+ A Sbjct: 360 LVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKA 419 Query: 443 LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502 LG+G+I F F P +N+ + L L AI + P+G L++LP L Sbjct: 420 LGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTK----PVGYLLAELPFSAML 475 Query: 503 ARMVLEAQKHGCVREAMIITSALSIQDPRERPMD--KQQASDEKHRRFHDKESDFLAFVN 560 ++M+ + + GC E + I + L +Q RP QQ+ HR+F E DF+ +N Sbjct: 476 SKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLN 535 Query: 561 LWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-KELGIPVNSEPAEY 619 + E+ + C +L Y ++ + QL V K+ GIP+ S + Sbjct: 536 AYTGFVEEGM------TKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDV 589 Query: 620 REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKP-PKWVMVAELVETSR 678 ++ + G + + + +I P S L+ P ++V+ EL++T++ Sbjct: 590 EKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQYVVYGELLQTTK 649 Query: 679 LWGRIAARIDPEWVEPVAQHLIKRT 703 L+ I EW+ +A H ++T Sbjct: 650 LFMNYVTVIKREWLTELAPHYYQQT 674 >UniRef50_C5LYU2 ATP-dependent RNA helicase DHX8, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LYU2_9ALVE Length = 1016 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 219/737 (29%), Positives = 366/737 (49%), Gaps = 81/737 (10%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK 60 + ++++ + A+Q+++ + +D + + NP + + + I + Sbjct: 325 LAQERRESKQAMQEQVIKAIPKD-------MSRPWEDPNPHQGERTLAQNLRSITMNSAS 377 Query: 61 VLL-------------REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 + +A P + LP+ + + +L+A+ ++QV+IV GETGSGKT Sbjct: 378 QNQIRKHGAPTGVAYGQRSALPMREQREGLPIFKLRSQLLQAMAENQVLIVIGETGSGKT 437 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+ + E G G+IG TQPRR+AA TVA R+AEE G +GY +RF DH S Sbjct: 438 TQMTQYMAEAGYADHGIIGCTQPRRVAAITVAKRVAEEYGCRLGQEVGYTIRFEDHTSPE 497 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 T +K MTDG+LL E D LL +Y I++DEAHER+++ D L G KE + R DLK+I+ Sbjct: 498 TRIKYMTDGMLLREALADPLLKKYSVIMLDEAHERTIHTDVLFGLCKEAIRERNDLKLIV 557 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS- 286 TSAT+D E+FSR+F ++ I + GRT+PVE+ Y ++ E D +QA V ++ Sbjct: 558 TSATLDAEKFSRYFFDSHIFTIPGRTFPVEILYS------NEPEEDYVQAALMTVMQIHL 611 Query: 287 QESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVL 346 E GDIL+F++G+ EI L++ Q Sbjct: 612 TEQPGDILVFLTGQEEIDTACQLLDERM----------------AQLAPMNPPPL----- 650 Query: 347 ATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG 406 +P Y P + S + RLP A+A QR GR GR G Sbjct: 651 ----------IPMGVYAAQPSEVQSSIFEPAP-XSRLPT-----ANARQRAGRAGRTGPG 694 Query: 407 ICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 C RLY+E F PEI R+NL++V+L + A+G+ D+ F F++AP + + + Sbjct: 695 KCYRLYTEKAFRTEMLPSAVPEIQRSNLSNVVLTLKAMGINDLLGFDFMDAPPVQTLINS 754 Query: 466 VRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSAL 525 + L +LGA+ + LT LGR++++ P+ P ++M+L + GC EA+ + + L Sbjct: 755 LEALWQLGALDDEGL-----LTKLGRKMAEFPMPPEQSKMLLASVDLGCADEAITVVAML 809 Query: 526 SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDY 585 S+Q+ RP DKQ +D+K +F+ E D + + ++ + C ++ Sbjct: 810 SVQNVFYRPKDKQAVADQKKSKFNSPEGDHVTLLEVYKAWSR------NRFSAPWCYENF 863 Query: 586 LNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYT 645 + +R+ QD+ QL ++ + +NS +Y + A+ G +++ +D ++ Sbjct: 864 IQVRSLRKAQDVRKQLIGIMDRYRLEINSCGQDYNRLRQAIAAGYFNNLCRRDPNEGYRV 923 Query: 646 GARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYS 705 + I P S L++K P+WV+ ELV T+R + R ++PEW+ +A ++ K+ Sbjct: 924 MRDLQQVYIHPSSALYQKNPEWVIYYELVMTTREYIREVCTVEPEWMPKIAPNMFKQAD- 982 Query: 706 EPHWERAQGAVMATEKV 722 R + A EK+ Sbjct: 983 ----NRGISRMKANEKI 995 >UniRef50_Q5KMH9 Pre-mRNA splicing factor, putative n=4 Tax=Fungi/Metazoa group RepID=Q5KMH9_CRYNE Length = 699 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 226/698 (32%), Positives = 351/698 (50%), Gaps = 50/698 (7%) Query: 38 KNPDAQQAIFQEMAKEIDQAAGKVLLREAA-RPEITYPDNLPVSQKKQDILEAIRDHQVV 96 K A + E D + + + A LP+ + ++ +L + + VV Sbjct: 8 KPGTAAPGSSLDRESEKDGSLLPINTSQNAHLSLDAQRQRLPIYKHREKLLWCVEKYPVV 67 Query: 97 IVAGETGSGKTTQLPKICMELGR-GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 IV G+TGSGK+TQLP+ E G G ++ TQPRR+AA +VA R+AEE+ + G +G Sbjct: 68 IVVGQTGSGKSTQLPQYLHEAGWTGQNHVVACTQPRRVAATSVATRVAEEVGSILGDEVG 127 Query: 156 YKVRFSDHVSD-NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 Y +RF D T +K MTDG+L E D LL +Y I+IDEAHER D LLG LK Sbjct: 128 YTIRFEDLSHPTRTKIKYMTDGMLFRETMMDPLLSKYSVIMIDEAHERGAYTDLLLGLLK 187 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFN-----------NAPIIEVSGRTYPVEVRYRPI 263 +++ +RP+L++II+SATID E F +FN +A I+ + GR +PVEV Y Sbjct: 188 KIMRKRPELRVIISSATIDAEDFLEYFNTNADGTDRSKDDAIIVSLEGRMFPVEVCYL-- 245 Query: 264 VEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLNL------R 316 + D QA V +L +E GDIL+F++G EI + L Sbjct: 246 ----KEPCADYTQAAVQTVFDLHLREPLGDILVFLTGREEIDQVIQEVADRLLSLPKAAP 301 Query: 317 HTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRY 374 LPLYA L EQ+ +F R+++ +TN+AE S+T+ GIKYV+D G +I Y Sbjct: 302 KLLALPLYATLPPEEQSLIFDPPPRDTRKVIFSTNIAEASVTIDGIKYVVDSGFVKIKTY 361 Query: 375 SYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF------LSRPEFTDPEI 428 + RT + L P S ASANQR GR GR S G C RLY P T PE+ Sbjct: 362 NPRTCMDVLTTTPCSLASANQRAGRAGRTSAGKCFRLYPASILPTTNPSSPMPLTTPPEL 421 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT- 487 +R++++ +LQ+ ALG+ ++A F F+ P + + L L AI + +LT Sbjct: 422 VRSDISLYLLQLKALGIDNLAKFDFMSPPPSEMMIRALEFLFCLKAIDDEG-----RLTR 476 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMD--KQQASDEKH 545 P+G +++++P+DP +A ++L + + C E + I + S+Q+ K ++ + Sbjct: 477 PMGERMAEVPLDPMMAAILLNSHEFRCGEEILTIAAMTSVQNVFITAQGGTKATMAELER 536 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 R+F +E D L +N +N A ++ C LNY + I QL++ + Sbjct: 537 RKFTAEEGDHLTLLNAYNAF-----ARYGQNNKQWCGNHRLNYKALSRAMSIRKQLKKYM 591 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 + IP+ S + + L++G + D + NA + P S +F + P Sbjct: 592 ERFRIPIVSCEGDAIRLRKCLVSGYFKNAAKMMPDGTYRSARENAPLHVHPSSVMFTRQP 651 Query: 666 K--WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 WV+ E+VET++ + R I+ +W+ +A H K Sbjct: 652 STGWVIYHEVVETTKSFMRDLTVINEDWLVELAPHFYK 689 >UniRef50_B9H2M0 Predicted protein n=9 Tax=Embryophyta RepID=B9H2M0_POPTR Length = 702 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 228/666 (34%), Positives = 349/666 (52%), Gaps = 50/666 (7%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQP 130 + LPV + + IL + H I+ GETGSGKTTQ+P+ E G G I TQP Sbjct: 47 SQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQP 106 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLM 189 RRLA +TVA+R+AEE+ + G +GY +RF D + TM+K +TDG+LL EI D LL Sbjct: 107 RRLAVQTVASRVAEEMDVKLGEEVGYTIRFEDVTNPAATMIKFLTDGVLLREIMNDPLLT 166 Query: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP---- 245 +Y I++DEAHERS++ D LLG LK++ RRP+L++II+SATI+ + S F + Sbjct: 167 KYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFQTSKKHRG 226 Query: 246 -------------IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHG 291 I+ V GR + V + Y + D +QA V + QE G Sbjct: 227 PEDHEFVPRKVPAILSVEGRGFNVHIHY------VVEPVSDYVQATVSTVLSIHEQEPAG 280 Query: 292 DILIFMSGEREIRDTADALNKLNLRH------TEILPLYARLSNSEQNRVFQS--HSGRR 343 DIL+F++G+ +I L + +LPLY+ L ++Q+ VF R+ Sbjct: 281 DILVFLTGQDDIDTAIRLLTEEAHASRKISSGLIVLPLYSSLPRADQDLVFSPTPRGKRK 340 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 +V++TN+AETSLT+ G+ YV+D G ++ Y+ + ++ L + PIS+ASA QR GR GRV Sbjct: 341 VVISTNIAETSLTLEGVVYVVDSGFSKQQFYNPISDIENLVVAPISKASARQRAGRAGRV 400 Query: 404 SEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNI 462 G C RLY+E+ F PE+ R+ L S ++Q+ ALG+ +I F + +P + Sbjct: 401 RPGKCYRLYTEEYFVNEMSSVGIPEMQRSKLVSCVIQLKALGIDNILGFDWPASPPPEAM 460 Query: 463 QDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 + +L LG + D KLT P+G Q +++P+DP +++M+L + + GC E + I Sbjct: 461 IRALEVLYSLGVLDDDA-----KLTSPVGFQAAEIPLDPMISKMILSSNQLGCSDEIITI 515 Query: 522 TSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 + LSIQ Q+ DE RF E D + F+N++ L S + C Sbjct: 516 AAILSIQSIWVSGRGVQKELDEAKLRFAAAEGDHVTFLNVYKGF------LQSGKSSQWC 569 Query: 582 RTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA-- 639 +Y+NY +++ +I QLR+ LGI + S + + A+ G ++ +A Sbjct: 570 HKNYMNYQAMKKVIEIREQLRRTALRLGIVLKSCEGDMLAVRKAVTAGFFANASRLEAFS 629 Query: 640 -DKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQH 698 + T + I P S LF+ PKWV+ LV T R + R +DP W+ A H Sbjct: 630 HNGMYKTVRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDRQYMRNVMTVDPSWLTEAAPH 689 Query: 699 LIKRTY 704 + Sbjct: 690 FFQHQR 695 >UniRef50_D0MZQ2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ2_PHYIN Length = 910 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 222/698 (31%), Positives = 363/698 (52%), Gaps = 43/698 (6%) Query: 30 RLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 + HG ++ + + F++ K ++ A LP+ + I+EA Sbjct: 227 QHHGAQRKRPMQTSRPGFKQHKKHQHRSINPNP---AVSELQRTRQRLPIYAHRSKIIEA 283 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELK-T 148 + D+QVVI+ GETGSGKTTQ+P+ E R + TQPRR+AA TVA R+ EE Sbjct: 284 VNDNQVVILVGETGSGKTTQIPQYIWESDRA-HARVAITQPRRVAAITVAQRVCEEANRG 342 Query: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 G +GY VRF D S NT +K MTDG+L+ E L +Y +++DEAHER+L D Sbjct: 343 PLGDSVGYCVRFDDTTSKNTRLKFMTDGMLVREALLSPTLERYSVVVLDEAHERTLQTDI 402 Query: 209 LLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN--APIIEVSGRTYPVEVRYRPIVEE 266 L G +K + +R DLK+++ SAT+D F R F + +I++ GR + V+V Y Sbjct: 403 LFGIVKRAMRKRKDLKVVVMSATLDVALFKRFFQDFKPAVIQIPGRMFQVDVFY------ 456 Query: 267 ADDTERDQLQAIFDAVDELSQESH---GDILIFMSGEREIRDTADALNKLNLR------H 317 T+ D L + AV ++ E G IL+F++G+ +I L + Sbjct: 457 TAKTQPDYLDSALVAVLQIHLEEKTSNGSILVFLTGQEDIETLETLLEEYARSLPADALK 516 Query: 318 TEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 + P++A + +Q +VF+ R+++LATN+AETS+T+ G++YV+D G + + Sbjct: 517 LMVCPIFAAMPREQQMKVFEPAPAGVRKVILATNIAETSITINGVRYVVDTGLVKQRSFV 576 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLAS 435 + ++ L E +S+A A QR GR GR + GIC RL+ E+ F PE P+I R +L Sbjct: 577 ASSGMEMLQTESVSKAQAWQRTGRAGREAPGICYRLFPEETFEQLPERAIPDIQRVSLEV 636 Query: 436 VILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQ 495 V+LQ+ +G+ D AF F+E P K ++ + L LGA+ + KLT LGRQ++ Sbjct: 637 VVLQLKIMGIDDALAFDFIEKPLKTSLVKALEKLYALGALD-----NKGKLTTLGRQMAG 691 Query: 496 LPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDF 555 LPV+P A M+L+A + GC EA+ + + LS++ P DK+ + + RF E D Sbjct: 692 LPVEPMYAVMLLKATELGCAEEALSVVAMLSVESIFYSPRDKKAEAAQSRARFVAYEGDQ 751 Query: 556 LAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615 + +N++N + S + CR Y+N+ + + + QL+ +++L +P+++ Sbjct: 752 ITLLNVFNGYIQC----GSKQRNKWCRDHYINHRAMTRVESVRLQLKGYLEKLELPIDTS 807 Query: 616 PAEYREIHIALLTGLLSHIGMKD-------ADKQEYT-GARNARFSIFPGSGLFKK--PP 665 + + +++ G + M+ + T R+ + P S LF + PP Sbjct: 808 FPDIDPLRKSIVAGFFLNTAMRSVAEGLGGSKTAYKTMCGRSEIVKVHPSSSLFMRNPPP 867 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 KWV+ ELV TS+ + R I+ EW+ +A + Sbjct: 868 KWVVYNELVFTSKHYIRSVLVIEKEWLVELAPTFFAKK 905 >UniRef50_Q9BKQ8 Probable ATP-dependent RNA helicase DHX35 homolog n=5 Tax=Bilateria RepID=DHX35_CAEEL Length = 732 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 230/717 (32%), Positives = 359/717 (50%), Gaps = 47/717 (6%) Query: 13 QQRLDSLMLRDRLRFSRRLHGVKKVKNP----DAQQAIFQEMAKEIDQAAGKVLLREAAR 68 ++ R F+R + + + A I++ A+ Sbjct: 9 HRQEPRKGAGARRGFARPDDSADAPRTGPLIFEERSTENAGAAPPIEEQLKVHNNPYASL 68 Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGH 127 LP+ + + IL ++ +I+ GETG GK+TQ+P+ +E G G I Sbjct: 69 NIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVI 128 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+A T+A R+AEE G +GY VRF D +T VK MTDG+LL EI D L Sbjct: 129 TQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPL 188 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF------ 241 L +Y I+IDEAHERS N D LLG L++++ R DL+II++SAT+D E F F Sbjct: 189 LSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETG 248 Query: 242 ----NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIF 296 + A II V GRT+PV V + + D Q+ D V + + E+ GDIL+F Sbjct: 249 NSDKDTAGIISVEGRTHPVAVHH------TKTSVPDYCQSAVDTVINIHKHENPGDILVF 302 Query: 297 MSGEREIRDTADALNKL-----NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATN 349 ++G+ E+ D + L +L N ++P Y L EQ + F H R++V+ATN Sbjct: 303 LTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATN 362 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AE S+T+PGI YVID G ++ V+ L +S+ASA QR GR GR+ G C Sbjct: 363 IAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCY 422 Query: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469 RLY E +F E T PEI R +AS ILQ+ ALG+ ++ F ++ P + +G+ LL Sbjct: 423 RLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELL 482 Query: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 LGAI Q ++ PLG Q+++ P+ P ++ +L++ + GC E + I + + IQD Sbjct: 483 YALGAIDETSQLTS----PLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQD 538 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 P ++ +D ++F +E D + +N++ E + ++ C ++NY Sbjct: 539 VFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVE------NGRSKKWCSDHFVNYR 592 Query: 590 RVREWQDIYTQLRQVVKELGIPVNSEP---AEYREIHIALLTGLLSHIGMKDADKQEYTG 646 + ++ +QL +++K I S I L+TG S + T Sbjct: 593 GLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTV 652 Query: 647 ARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + F+++ GS + K PKWV+ E+++ S R I+PEW+ +A H + Sbjct: 653 KESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYE 706 >UniRef50_D1IUD7 Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IUD7_VITVI Length = 687 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 218/696 (31%), Positives = 349/696 (50%), Gaps = 69/696 (9%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 K+ + AI + + + LPV +K++ L+ ++ +Q Sbjct: 23 KISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEILEKRRTLPVWHQKEEFLQVLKANQS 82 Query: 96 VIVAGETGSGKTTQLPKICMEL------GRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 +I+ GETGSGKTTQ+P+ +E + K +I TQPRR+AA +V+ R+AEE+ Sbjct: 83 LILVGETGSGKTTQIPQFVLEAVDIETPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVT 142 Query: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY +RF D S T++K +TDG+LL E D LL +Y II+DEAHER+L D L Sbjct: 143 IGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVL 202 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 G LKE+L RPDLK+++ SAT++ E+F +FN AP+++V GR +PVE+ Y + Sbjct: 203 FGLLKEVLKNRPDLKVVVMSATLEAEKFQGYFNGAPLMKVPGRLHPVEIFY------TQE 256 Query: 270 TERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLNLR------HTEILP 322 ERD L+A V ++ E GDIL+F++GE EI D ++K + +P Sbjct: 257 PERDYLEAAIRTVVQIHMCEGAGDILVFLTGEEEIEDACKKISKEIANLGDQVGPVKAVP 316 Query: 323 LYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382 LY+ L + Q ++F+ A LT +V+ Sbjct: 317 LYSTLPPAMQQKIFEP------------APPPLT--------------------EVRVES 344 Query: 383 LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMT 441 L + PIS+ASA+QR GR GR G C RLY+E F + T PEILR+NLA+ +L + Sbjct: 345 LLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 404 Query: 442 ALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPR 501 LG+ D+ F F++ P + + +L LGA+ D LT LG +S+ P+DP+ Sbjct: 405 KLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN-----LTKLGEIMSEFPLDPQ 459 Query: 502 LARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNL 561 +++M++ + + C E + I++ LS+ + RP + Q+A+DE RF + D L +N+ Sbjct: 460 MSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNV 519 Query: 562 WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE--- 618 ++ + +N C +++N ++ ++ QL +++ + + S Sbjct: 520 YHAYKQ------NNEDPSWCYENFVNQRALKAADNVRQQLVRIMARFNLKLCSTDFNSRD 573 Query: 619 -YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS 677 Y I A+L G + + T N + P + L K P+WV+ E V TS Sbjct: 574 YYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTS 632 Query: 678 RLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQ 713 R + R + EW+ VA H P+ E + Sbjct: 633 RNFIRTVTDVRGEWLVDVAPHYYDLANF-PNCEAKR 667 >UniRef50_A7E6W3 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E6W3_SCLS1 Length = 696 Score = 785 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 238/708 (33%), Positives = 365/708 (51%), Gaps = 81/708 (11%) Query: 59 GKVLLREAARPEITYPDNL-PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 L P + P +L P++Q ++ +L I + V IV G TGSGKTTQ+P+ + Sbjct: 2 ADFDLSSNFIPALHKPSSLLPIAQHRESLLYLIESYPVTIVIGHTGSGKTTQIPQFLEKA 61 Query: 118 GRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 G G I TQPRR+AA TVA R+AEE+ E G +GY +RF D S T +K +TDG Sbjct: 62 GWCANGKQIAVTQPRRVAATTVAIRVAEEVGCEVGKEVGYSIRFEDVTSAATKIKFLTDG 121 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRP-DLKIIITSATIDPE 235 +LL E D LL +Y I++DEAHERSL+ D LLG LK++L +RP DL+III+SAT+ E Sbjct: 122 LLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGVLKKILKKRPNDLRIIISSATLQAE 181 Query: 236 RFSRHFNNAP------------------------------------IIEVSGRTYPVEVR 259 F F+N P II + GR YPV++ Sbjct: 182 DFLNFFSNDPEVEAKPNVDDAMTLDDLIAQGSSSTNGSKNDGKIGQIISLEGRMYPVDIL 241 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL----- 313 Y ++ D L+ D V ++ +E GDIL+F++G EI A+++ Sbjct: 242 YL------ENPAEDYLERAIDTVFDIHTKEPDGDILVFLTGREEIDKAVQAISERAASLH 295 Query: 314 -NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 + LPLYA LS +Q VF+ + R+++ +TN+AE S+T+ GI YV+D G + Sbjct: 296 PRSQALMPLPLYAGLSTEQQMFVFELAQENTRKVIFSTNIAEASVTIDGIIYVVDCGFVK 355 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 + Y+ T ++ L PIS+ASA QR GR GR G C RLY+E +F + E T PEI R Sbjct: 356 LRAYNPITGIETLTATPISKASATQRSGRAGRTKPGKCFRLYTEANFQALEEATVPEIQR 415 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PL 489 +NLA +ILQ+ ALG+ +I FPF+ +P I G+ LL LGA+ + KLT PL Sbjct: 416 SNLAPIILQLKALGIDNIVRFPFLTSPPAELIIRGLELLYSLGALD-----TYAKLTKPL 470 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQASDEKHRRF 548 G ++++L V+P +A+ +L A C+ E + I + S+ + D+++A + R+F Sbjct: 471 GTRMAELAVEPMMAKTLLSASSFNCLSEILTIAAMTSVGGNIFYNDYDEKKAMETAKRKF 530 Query: 549 HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 +E D + +N++ + K R C +YLN+ + + I +QL++ ++ Sbjct: 531 AVEEGDHITLLNIYQSFITKGKKQ-----PRFCHDNYLNFKALSKAISIRSQLKRYLERF 585 Query: 609 GIPVNSE--------------PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 GI ++ P + +I L TG +H D Sbjct: 586 GISIDETLSSSSNPNMLSVGGPDKSEQIRRCLTTGYFAHAAKMQPDGTFRNIGGGTILHA 645 Query: 655 FPGSGLFKKPPKWVMVAELVE-TSRLWGRIAARIDPEWVEPVAQHLIK 701 P S +F + +WV+ +E+VE ++++ R +RI+ W+ A K Sbjct: 646 HPSSLMFNRKCEWVVFSEVVELGAKVYIRDLSRIEKGWLVEYAPEFYK 693 >UniRef50_UPI0001925C54 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 35, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001925C54 Length = 748 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 217/699 (31%), Positives = 364/699 (52%), Gaps = 39/699 (5%) Query: 27 FSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDI 86 +++ K + ++ + + LP + + + Sbjct: 2 LNKKNIFWKPGAEKPGIDLRTERQSEGEGAGSFMIYNPNNLLSIQQQRQRLPSFKYRNAV 61 Query: 87 LEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG-HTQPRRLAARTVANRIAEE 145 L + +Q VI++ TGSGK+TQ+P+ E G + I TQPRR+A +VA+R+AEE Sbjct: 62 LYLLEKYQTVIISASTGSGKSTQIPQYLYEAGWTNEKKIIGITQPRRVAVTSVASRVAEE 121 Query: 146 LKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSL 204 + T G +GY +RF D + T +K +TDG L+ E+ D LL QY +++DE HER+L Sbjct: 122 MGTALGREVGYSIRFEDCTDKDLTKIKFLTDGYLVREMMADPLLSQYSVLMLDEVHERTL 181 Query: 205 NIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN----------NAPIIEVSGRTY 254 D ++G LK++L +RPDL++II+SAT+D +++ + FN + I+E+ GRT+ Sbjct: 182 YTDVIIGLLKKILRKRPDLRLIISSATLDADQYQKFFNIKKSVNKAEVTSVILEMEGRTF 241 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADALNKL 313 PV++ Y + +++ D V + + S GDIL+F++G+ E+ + + Sbjct: 242 PVDIFYLQAAI------PNYVKSAVDTVINIHKSYSDGDILVFLTGQDEVENALQLIQNE 295 Query: 314 ------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVID 365 N+++ +LPLY L +EQ +VFQ + R++V++TNVAE S+T+ GI YVID Sbjct: 296 INLLPKNIQNVLLLPLYGGLPMAEQLKVFQRAPPNTRKVVVSTNVAEASITISGIVYVID 355 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G ++ Y+ + + L I PIS+ASA QR GR GRV G RLY E +F FT Sbjct: 356 SGFVKLKAYNAASGLDSLVITPISKASAAQRSGRAGRVRAGKAYRLYPECEFDKLSLFTI 415 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI RTNLASVILQ+ +LG+ ++ F F+ AP + + +G+ LL LGA+T + + Sbjct: 416 PEIQRTNLASVILQLKSLGISNVLRFNFLSAPPAQLMINGIELLFALGALTEEGNLTE-- 473 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 PLG Q+++ P++P L++M+L + C EA+ + + L I++ + + Sbjct: 474 --PLGVQMAEFPLNPMLSKMLLCSGNFQCSEEAVTLAAMLQIENVFVAVPNMKNKVTRSK 531 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 RF KE D L +N++ + K++ C +LNY + + QL ++ Sbjct: 532 LRFAAKEGDHLTLINVYRAFIKHGKSM------DWCHKHFLNYKSLVRVVKVRNQLISIL 585 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK--K 663 K+ IP+ S + I +++G +++ + T N + P S L Sbjct: 586 KQYDIPIVSCKEDDEAIRKCIISGFFANVAKYHPSGEYRTVRDNRSLYLHPSSVLSSITP 645 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 PPK ++ E++ TS+ + R A I W+ +A + Sbjct: 646 PPKLLIFNEVLCTSKDYMRDATDIKLSWLLELASSYYEY 684 >UniRef50_Q9FZC3 T1K7.25 protein n=12 Tax=Embryophyta RepID=Q9FZC3_ARATH Length = 726 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 213/681 (31%), Positives = 346/681 (50%), Gaps = 69/681 (10%) Query: 81 QKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVA 139 ++ ++E ++ + ++I+ GETGSGKTTQLP+ G +G IG TQPRR+AA TVA Sbjct: 54 PVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVA 113 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 R+AEE + + G +GY +RF D S +T +K MTDG+LL E D L +Y II+DEA Sbjct: 114 KRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEA 173 Query: 200 HERSLNIDFLLGYLKELLPRRP-------------------------------------- 221 H+RS++ D LL LK++ R Sbjct: 174 HDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGR 233 Query: 222 ---DLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAI 278 LK+II SA++D FS +F A + V GR +PV++ Y E D + A Sbjct: 234 KLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILY------TVHPESDYVDAT 287 Query: 279 FDAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSE 331 + ++ +E GDIL+F++G+ EI + + + R L +++ L + + Sbjct: 288 LVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQ 347 Query: 332 QNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPIS 389 Q +VF R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L + P S Sbjct: 348 QMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPAS 407 Query: 390 QASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIA 449 +A QR GR GR G RLY E +F + T PEI R NL+++ILQ+ ALG+ DI Sbjct: 408 KAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIV 467 Query: 450 AFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA 509 F F++ P + I + L LGA+ D + P+G Q+S+LP++P ++ ++ A Sbjct: 468 GFDFIDKPSRGAIIKALAELHSLGALADDGKLEN----PVGYQMSRLPLEPVYSKALILA 523 Query: 510 QKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNY----L 565 + C+ E +I + LS++ P +K++ + F E D L +++++ L Sbjct: 524 NQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFL 583 Query: 566 GEQQKALSSNAF----RRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE 621 +++ A S N ++ C+ +Y+N ++ +DIY Q+R+ V+++G V+S + Sbjct: 584 EKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLA 643 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 L + D I P S LF+ P+ V+ EL++TS+ + Sbjct: 644 FRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKKYI 703 Query: 682 RIAARIDPEWVEPVAQHLIKR 702 + ID W+ +A H + Sbjct: 704 KNLTIIDSLWLSELAPHHFQT 724 >UniRef50_Q4N829 RNA helicase, putative n=2 Tax=Theileria RepID=Q4N829_THEPA Length = 974 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 221/709 (31%), Positives = 380/709 (53%), Gaps = 71/709 (10%) Query: 47 FQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGK 106 ++ + + L R+ + + LP+ + ++L AI+ ++ +IV GETGSGK Sbjct: 279 KEKRTSNKYLSRLEKLKRKQHKLILQERQKLPIYYYRTELLSAIKKYKTLIVVGETGSGK 338 Query: 107 TTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSD 166 TTQ+P+ E+G G+IG TQPRR+AA +VA R+++EL + G +GY +RF D+ S Sbjct: 339 TTQIPQYLHEVGYSRAGVIGITQPRRVAAMSVATRVSKELNVKMGSTVGYCIRFEDYTSS 398 Query: 167 NTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII 226 NT +K MTDGILL E + L Y I+IDEAHER+L+ D + G +K+L+ R D ++I Sbjct: 399 NTKIKYMTDGILLREFASNPTLENYSVIMIDEAHERTLHTDVIFGLVKDLIRYRNDFRLI 458 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 I+SAT++ E+F+ +F+NAPI ++ GR YPV++ Y E + L A + ++ Sbjct: 459 ISSATLEAEKFALYFDNAPIFKIPGRRYPVQIYY------TKTPEANYLDASIITILQIH 512 Query: 287 QESH--GDILIFMSGEREIRDTADAL-----NKLNLRHTEILPLYARLSNSEQNRVFQSH 339 GDIL+F+ G++EI + L N+ ++R IL +Y+ L + QN++F+ Sbjct: 513 LTQPIDGDILVFLPGQQEIEYIQEELIARLKNRKDIRELIILSIYSSLPSDMQNKIFEPT 572 Query: 340 S--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 R+++L+TN++ETS+T+ I YVID G ++S YS +T + L + P S+A+ANQR Sbjct: 573 PENSRKVILSTNISETSITLDNIVYVIDTGFCKLSLYSPKTGLDSLIVVPCSKANANQRS 632 Query: 398 GRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GRV G C RLY++ + + +PEI R NL+SV+L + ++G+ D+ F F++ Sbjct: 633 GRAGRVRAGHCFRLYTKLSYDKEMEDNHEPEIKRVNLSSVVLLLKSIGIDDLLNFDFMDP 692 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 P ++ + + L+ LG + + LT LG+ +S+LP+DP ++ +L + +H C Sbjct: 693 PTPESLINSLELIYSLGCLNDSGE-----LTKLGKIMSELPLDPMYSKSLLFSIQHNCHE 747 Query: 517 EAMIITSAL--SI----------------------QDPRERPMDKQQASDEKHRRFHDKE 552 + +II S L SI + P D++ ++ ++ F++ Sbjct: 748 DIIIILSMLIQSIFYLVIHSFNLHTYPNSISQRLGNNIFYIPKDRRIHAENNYKNFYNNN 807 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG--- 609 SD L +N++N E ++ C +YL Y + + Q+I QL+ ++ L Sbjct: 808 SDHLMLLNVYNQWKE------NDFSIAWCYENYLQYKSLIQIQNIIQQLQNLITRLNLVD 861 Query: 610 --------------IPVNSEPAEYREIHIALLTGLLSHIGMKDA---DKQEYTGARNARF 652 + S I +++G +++ +K+ +K T Sbjct: 862 GDTVNGDVQNNQKDKEIGSNMNYNDVIMKCIVSGFFTNVAVKNEKKSEKNYKTIKSKQVV 921 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 I P S +FK+ K+V+ +LV T++ + R + I +W+ +A H + Sbjct: 922 YIHPNSSVFKQNIKFVVYNDLVLTTKHFIRQVSEIQAKWLMELAPHYYQ 970 >UniRef50_A8IHD9 DEAH-box nuclear pre-mRNA splicing factor n=2 Tax=Viridiplantae RepID=A8IHD9_CHLRE Length = 689 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 230/677 (33%), Positives = 355/677 (52%), Gaps = 33/677 (4%) Query: 39 NPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIV 98 N + ++ ++ + + E R LP + +L ++ H+ +++ Sbjct: 3 NTEHEKPRPKKQRRSGELRENDAAAAERRRRIDAERRQLPAWAARDKLLALLQQHRTLVL 62 Query: 99 AGETGSGKTTQLPKICMELGRGIKGL-----IGHTQPRRLAARTVANRIAEELKTEPGGC 153 GETGSGKTTQ+P+ + G I TQPRR+AA TVA R+AEE+ T+ G Sbjct: 63 VGETGSGKTTQIPQFLLAAKFGKSSGSKGACIAVTQPRRVAAMTVARRVAEEMGTKIGQQ 122 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY +RF D S T +K MTDG+LL E D LL +Y ++IDEAHER+++ D LLG + Sbjct: 123 VGYAIRFEDVTSPATRIKYMTDGLLLREALVDPLLSRYRVVVIDEAHERTVHTDVLLGLI 182 Query: 214 KELLPRR-PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTER 272 K + RR D ++++ SAT+D RF +F A V GR +PV+V Y E Sbjct: 183 KGVQARRGDDFRLVVMSATLDAARFVDYFPGAVAALVRGRQFPVQVLY------TARPED 236 Query: 273 DQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL-----NLRHTEILPLYAR 326 + L A +A ++ +E GD+L+F++G+ EI L R +LP+YA Sbjct: 237 NYLDAAINATLQVHGEEPEGDVLVFLTGQDEIDSAERLLKAAAAVGGRPRELLVLPIYAA 296 Query: 327 LSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 384 L +Q +VF+ R+ +LATN+AETS+T+PG++YVID G + Y+ + ++ L Sbjct: 297 LPPEQQMKVFEPAPPGTRKAILATNIAETSITIPGVRYVIDTGHVKARDYNAKLGLESLA 356 Query: 385 IEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALG 444 + P+SQA A QR GR GR G RLY+E DF T PEI R NLASV+LQ+ A+G Sbjct: 357 VVPVSQAQARQRSGRAGREGPGKAYRLYTEADFSQLAATTPPEITRCNLASVVLQLKAMG 416 Query: 445 LGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLA 503 + D+ F F++ P + I + LL LGA+ ++ KLT +G +LS+LPVDP Sbjct: 417 IDDVLGFDFMDPPPRTAILRSLELLFALGALD-----NSGKLTEEVGLRLSRLPVDPMFG 471 Query: 504 RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN 563 R++L A + GC EA+ + + +S + P K+ +F +E D L +N++ Sbjct: 472 RVLLAAAELGCGVEALAVVAMVSADNVFHTPRQKEAEWRAARLKFLSREGDHLTLLNVFR 531 Query: 564 YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE-----LGIPVNSEPAE 618 E K S A C +++N +R+ +DIYTQL + + LG+P+ + E Sbjct: 532 GFMELPK--SHKARTGWCSDNFINIRALRKAEDIYTQLVRFMGHPCPPGLGLPLATCGDE 589 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSR 678 + AL GL H D A + + P S L ++ P ++ EL+ T+R Sbjct: 590 TTPLRRALTAGLFPHAARLQPDGSYRVIATGRQVFLHPSSVLLERKPDCLVFNELMHTTR 649 Query: 679 LWGRIAARIDPEWVEPV 695 + R A I+ W+ + Sbjct: 650 TYARDATAIEARWLPEL 666 >UniRef50_A4S4Y0 Predicted protein n=3 Tax=Mamiellales RepID=A4S4Y0_OSTLU Length = 679 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 224/675 (33%), Positives = 357/675 (52%), Gaps = 38/675 (5%) Query: 55 DQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC 114 + A +LP+ + K ++E IR + VI+ GETGSGKTTQ+P+ Sbjct: 20 ARKANGAPTGAKREEIDRVRKSLPIYRAKDRLMEEIRKSETVIIIGETGSGKTTQIPQYV 79 Query: 115 MELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLM 173 E G +IG TQPRR+AA +V+ R+A+E T G +GY +RF D S+ T +K + Sbjct: 80 YEDMTLTNGLMIGVTQPRRVAAVSVSRRVADETGTAHGTLVGYAIRFEDVSSEETRIKFL 139 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR------------- 220 TDG+LL E D LL +Y I+IDEAHER+L DFLLG +K + RR Sbjct: 140 TDGMLLREAVGDPLLSKYGVIMIDEAHERTLQTDFLLGTIKGVQRRRRESLGEDQYGRAL 199 Query: 221 PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFD 280 P L++I+ SAT++ FS+ F+ AP+I GRT+PVE+ Y ++ E D L A Sbjct: 200 PPLRVIVMSATLEASSFSKFFDGAPVIYSRGRTFPVEMFY------TEEPEEDYLDAAMW 253 Query: 281 AVDELSQESH-GDILIFMSGEREIRDTADALNKLNLR------HTEILPLYARLSNSEQN 333 V ++++E GD+L+F++G+ EI L + ++ L+A L EQ Sbjct: 254 TVLQVNEEEAAGDVLVFLTGQEEIESLGRMLREKASELPSNVLKLNVVLLFAALPPEEQM 313 Query: 334 RVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 +VF+ R++VLATN+AETSLT+ GI+YV+D G +++ + R+ V L + PI+Q+ Sbjct: 314 KVFEPTPLGTRKVVLATNIAETSLTINGIRYVVDSGLSKLRTHHPRSGVDELLVTPIAQS 373 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAF 451 A QR GR GR + G C RLY+E+ S ++ PE+LRTNL+ V+LQ+ A+ + DI +F Sbjct: 374 QAQQRAGRAGREAPGKCFRLYTEEIMPSLEKYVKPELLRTNLSGVVLQLKAMQVDDILSF 433 Query: 452 PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQK 511 PF++ P K + + LL L A+ D KL +G+++++ P++P AR V+ A+ Sbjct: 434 PFIDPPPKEALLRSLELLYSLDALDDDG-----KLNDVGKKMARFPLEPMAARCVIAAEI 488 Query: 512 HGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKA 571 GC E + + S LS + + + + KE D L + ++N A Sbjct: 489 EGCAIETLAVLSMLSTDSVFQFSREADGQKNVARHKLKRKEGDHLTLLRVFNEF----SA 544 Query: 572 LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLL 631 S R CR +N+ + + I QL + GI + S ++ + +L++G Sbjct: 545 CSPKRSRDWCREHQINHRAMTKAVKINEQLTRAAMSQGINLTSCEDDFTLVLRSLVSGFF 604 Query: 632 SHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEW 691 + K+ D + +I P S +F+ PP+ ++ ELV T++++ R + I W Sbjct: 605 MNTASKEMDGSFKVFTTGQKLTIHPSSVMFQSPPETILFNELVRTNKMYARDVSSIKKSW 664 Query: 692 VEPVAQHLIKRTYSE 706 + +A R + Sbjct: 665 LSELASKTFSRRSTN 679 >UniRef50_B4JQ72 GH13648 n=1 Tax=Drosophila grimshawi RepID=B4JQ72_DROGR Length = 698 Score = 771 bits (1992), Expect = 0.0, Method: Composition-based stats. Identities = 232/686 (33%), Positives = 361/686 (52%), Gaps = 40/686 (5%) Query: 29 RRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILE 88 + + +KK N + Q + K + +LPV +Q IL+ Sbjct: 29 KEQNAIKKPTNNNFNQQQKPNLYKNV-----LAANSNKRSSIDQERRSLPVYNCRQRILK 83 Query: 89 AIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKT 148 + + +++ GETGSGKTTQ+P+ ++ G G+IG TQPRR+AA T+A R+A+EL T Sbjct: 84 ELEANDTLLIMGETGSGKTTQIPQFLLQAGYANGGIIGITQPRRVAAITIAKRVAQELAT 143 Query: 149 EPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 G +GY VRF D ++ T ++ MTDGILL E DRLL +Y I++DEAHER++N D Sbjct: 144 GIGETVGYTVRFEDATTERTRIRYMTDGILLREAIGDRLLRKYSAIMLDEAHERTVNADV 203 Query: 209 LLGYLKELLPRR-----PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPI 263 L G +K+ R P LKIIITSAT+D + F ++F + + GRT+PV V + Sbjct: 204 LFGIVKQAQLERAKQRLPKLKIIITSATMDIDHFGQYFG-VRGMYLEGRTHPVRVLH--- 259 Query: 264 VEEADDTERDQLQAIFDAVDELSQESH--GDILIFMSGEREIRDTADALNKLN------L 315 A D++ D + A + ++ + D+LIF++G+ EI A + +L Sbjct: 260 ---AKDSQEDYIHAALVTLFDIHRHEPINHDVLIFLTGQEEIEALAQQIRQLARINNTGP 316 Query: 316 RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 + LYA+L+ +Q F + R+IVLATN+AETS+T+PGI+ VID G + Sbjct: 317 SDVRVFTLYAQLAQGKQLECFLPVPANTRKIVLATNIAETSITIPGIRCVIDCGYVKEKS 376 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 ++ T ++ L ISQA A QR GR GR + G C R YS+ + PEILR+NL Sbjct: 377 FNPGTGLELLKTVRISQAQAWQRCGRAGRDAPGKCYRTYSKASMEQFRSTSLPEILRSNL 436 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 S +LQ+ ALG+ D + F F++AP I R LE+LGAI + + +T GR + Sbjct: 437 TSTVLQLLALGI-DCSNFDFIDAPPPEGISSAHRALEQLGAI----KPAPLVITTTGRWM 491 Query: 494 SQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKES 553 +Q P+DPR A+++L A GC+ E + + +ALS + DK + + H +F K Sbjct: 492 AQFPLDPRYAKLLLSAPSFGCMEEMLSLVAALSSDNVFIGHTDKSELAALAHAKFQSKHG 551 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613 D L +N+++ + +K + C ++LN + +++ QL ++ L + +N Sbjct: 552 DHLTLLNVFSTFQKTEK------PKIWCHDNFLNIRNLTYARNVRNQLAEISGRLNLAIN 605 Query: 614 SEPAEY-REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK-PPKWVMVA 671 S + + LLTGL +I + + T + + I P S L K P+ ++ Sbjct: 606 SCGGDNVDAVKKCLLTGLFENIALLQKEGHYLTVSGRVKAKIHPSSVLHGKYKPQCILFT 665 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQ 697 E+V+T + R I EWVE V Sbjct: 666 EMVQTEHNFLRQVTEISSEWVEEVLP 691 >UniRef50_C4LWD6 Helicase, putative n=10 Tax=Eukaryota RepID=C4LWD6_ENTHI Length = 675 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 232/673 (34%), Positives = 358/673 (53%), Gaps = 29/673 (4%) Query: 39 NPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIV 98 D + + + +EI E + LPV Q +++++ ++ ++V+I+ Sbjct: 2 KRDIKHSKKRIDLEEIINPLNGKPYSENYFKLQEKINALPVKQYEKEVINELKKNRVLIL 61 Query: 99 AGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKV 158 G TGSGKTTQ+PK C+ + TQPRR+AA +VA R+AEE+ + G +GY V Sbjct: 62 EGATGSGKTTQIPKFCLNPEICGGKGVCCTQPRRVAAISVAQRVAEEMDVQLGEEVGYCV 121 Query: 159 RFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP 218 RF D SD T + MTDG+LL E+ D + +Y I++DEAHER+++ D L G LK LL Sbjct: 122 RFDDCRSDKTKLTYMTDGMLLRELMGDPKIQKYGVILLDEAHERTVSTDILFGVLKSLLE 181 Query: 219 RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAI 278 R DLKI++ SAT++ +F +F+NAP + V GRTYPV + Y E D +A Sbjct: 182 EREDLKIVVMSATLEATKFKEYFDNAPNMSVEGRTYPVTINYS------RYPENDYFEAA 235 Query: 279 FDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR-HTEILPLYARLSNSEQNRVFQ 337 V ++ E GD+LIFM+GE EI + +N + + H LPLY+ L EQ RVF+ Sbjct: 236 VKVVSKIDNEPEGDVLIFMTGEEEIEEMVARINSMKTKSHMIALPLYSALPQQEQQRVFE 295 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 +GR+++++TN+AETS+T+ GI YVID G + Y T+V+ L + ISQA+A QR Sbjct: 296 KVNGRKVIVSTNIAETSVTIDGIVYVIDTGYVKQKVYLPSTRVETLQVTAISQAAAQQRA 355 Query: 398 GRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GR G C RLY+E F S P+ T PE+LRT+LASVIL M +G+ DI F +++A Sbjct: 356 GRAGRTRPGQCYRLYTEKGFNESLPKQTVPEMLRTSLASVILHMKKIGIKDILHFDYLDA 415 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 P + + + L L A+ LT +G ++S++PVDP+LA ++ + + V Sbjct: 416 PSPQVMVRALEQLYYLNALDDKTN-----LTEIGSKISEIPVDPQLAVTLIASIDYNVVD 470 Query: 517 EAMIITSALSIQDPRERPMDKQQ--ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 E I S L++ RP ++++ +D F+D ESD + +N +N E K Sbjct: 471 EISTIVSLLNVPSIFYRPKEQEEKSKADAAKAYFNDHESDHITLLNTYNAWIENGKD--- 527 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY-----REIHIALLTG 629 + +Y+N +++ + I QL ++ +G+ +P E I AL G Sbjct: 528 ---SKWAWNNYVNQRALKQAESIKNQLLGILYRMGVKQQQKPIEDVRKRKELIRKALCKG 584 Query: 630 LLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDP 689 N + P S + K+ +W++ E V T R + R A+ I P Sbjct: 585 FFMQSAH-QVKGGYQIVCDNRIVLLHPSSCIGKR--EWILYNEYVMTKREYVRTASSIQP 641 Query: 690 EWVEPVAQHLIKR 702 EW+ + + Sbjct: 642 EWLFEASPKYFAQ 654 >UniRef50_Q0UY60 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UY60_PHANO Length = 857 Score = 765 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 228/730 (31%), Positives = 367/730 (50%), Gaps = 69/730 (9%) Query: 26 RFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLRE----------AARPEITYPD 75 + ++ ++V D E + D + + A+ Sbjct: 123 KVRAQIKKPERVSAEDYDFVFDTEQNIKFDAPVIDLEKQRLQANLDEAEVKAKNIDDTRK 182 Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134 +LP+ + +++ ++A+ +HQ++++ G TGSGKTTQL + E G IG TQPRR+A Sbjct: 183 SLPIYKYREEFIQAVSEHQIIVLVGATGSGKTTQLTQYLNESGYAKNSLRIGCTQPRRVA 242 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A +VANR+A E+ T+ G +GY VRF +SD+T ++ MTDG+ L D L Y + Sbjct: 243 AISVANRVAAEVGTKIGRRVGYSVRFESAMSDDTQIEYMTDGLALRLCLTDPTLSDYSVM 302 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 I+DEAHER+L D L+ LKE+ RP+ ++II SAT+ ++FS +F++API+ + GRT+ Sbjct: 303 ILDEAHERTLATDILMSLLKEICLARPEFRLIIASATLAAQKFSTYFHDAPIMNIPGRTF 362 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELS-------QESHGDILIFMSGEREIRDTA 307 P+ + E + L A V ++ + GDILIF +GE EI A Sbjct: 363 PI------TKAHSTQPEANYLSAAVTTVFQIHLGSNGSMNDVKGDILIFFTGEEEILAAA 416 Query: 308 DALNK------LNLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPG 359 D +N + P+Y L + Q +F R++VLATN+AETSLT+ G Sbjct: 417 DYINDTQKKLGSRSPPLIVAPVYGALPSEAQQLIFNPAPPGSRKVVLATNIAETSLTIDG 476 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE-DDFL 418 I YVID G + + ++ T + L P S+ASA QR GR GR G+ RLY++ + Sbjct: 477 ISYVIDCGLEKQNSFNAATNMASLVTVPCSRASAEQRAGRAGRTGPGMAFRLYTKYAFYH 536 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV------------------EAPDKR 460 PE + PEILR +L +L + A+G+ D+ F F+ +AP Sbjct: 537 ELPESSLPEILRISLDGPVLTLKAMGIHDVLHFDFMVRISYPEVQIGTLANHPQDAPPVE 596 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 + + L LG + ++ +T LGR+ S+LP+DPRLA+++L A GCV E + Sbjct: 597 ALAASLETLYALGYLDSNG-----AVTKLGRRASELPLDPRLAKVLLTADSLGCVDEIVT 651 Query: 521 ITSALSI-QDPRERPMDKQQASDEKHRRFHDK----ESDFLAFVNLWNYLGEQQKALSSN 575 + + + P DK+ A++ RF D +AF+N+WN E ++ Sbjct: 652 LVAMVQEAGTLFFAPKDKKVAAEHAKARFTSSVAGTGGDLIAFLNVWNEFVE------ND 705 Query: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE-YREIHIALLTGLLSHI 634 CR +++ Y + +D+ QL ++ + + I +S Y +I A ++G +++ Sbjct: 706 YSVTWCRDNFVQYRCLNRVRDVRDQLVKLCERVEIFESSCGVHEYVKILKAFVSGYFANV 765 Query: 635 GMKDADKQ-EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVE 693 + D Q T + +I P S L PK ++ AELV TS+ + R A I+P W+ Sbjct: 766 ARLNRDGQTYRTLKQGLSVNIHPSSCLRDVRPKLIVFAELVLTSKEFARTCAPIEPAWLT 825 Query: 694 PVAQHLIKRT 703 +A H K+ Sbjct: 826 EMAPHYHKQK 835 >UniRef50_A2D7A5 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2D7A5_TRIVA Length = 660 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 203/660 (30%), Positives = 353/660 (53%), Gaps = 21/660 (3%) Query: 48 QEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 ++ +K ++ + +LP+ + K+ I+E I ++ I+ GETG GK+ Sbjct: 16 RKRSKNKSGGHKDPQKKKEFNALYQFRKSLPIWKSKKQIIELIANNPTTILVGETGCGKS 75 Query: 108 TQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN 167 TQ+P+ ++ + TQPRR++A ++A R+A E E G +GY VRF + S Sbjct: 76 TQVPQFLVDSFELKGCRVAVTQPRRVSATSLAARVAAERNCEVGSYVGYSVRFDNKSSPK 135 Query: 168 TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIII 227 + +K +TDG+LL EI D L Y+ +I+DE HER++ D L+G L++L RR DLK+I+ Sbjct: 136 SYIKYVTDGMLLREILVDNDLSAYNVVILDEIHERTVQTDLLIGLLRDLQARRSDLKLIL 195 Query: 228 TSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ 287 SAT++ + F FN PII V GRT+ V ++Y D+ + D ++A AV +L++ Sbjct: 196 MSATLNCKLFVDFFNGPPIIHVEGRTFKVAIKY------TDEPQTDYIEATTTAVLQLNE 249 Query: 288 E-SHGDILIFMSGEREIRDTADALN-KLNLRHTEILPLYARLSNSEQNRVFQS--HSGRR 343 E GD L+F++G+ EI + + L + ++LPLYA L +Q VF R+ Sbjct: 250 ECDKGDFLVFLTGQEEIEEVMETLKTEETYPPLKVLPLYAALPMYQQQEVFNPVDEGTRK 309 Query: 344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRV 403 ++L+TN+AETS+T+PGIKYVID G ++ Y+ + ++ L + P ++A QR GR GR Sbjct: 310 VILSTNIAETSVTIPGIKYVIDSGLVKVKTYNPVSGIEILGVTPCAKAQVVQRAGRAGRE 369 Query: 404 SEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQ 463 SEGI RL++ED F + EI R +L+SV+LQ+ ALG+ + F F+E P IQ Sbjct: 370 SEGIAFRLFTEDSFFDLKDQPVAEIRRADLSSVVLQLFALGVKNPMTFGFLERPPTEMIQ 429 Query: 464 DGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITS 523 ++ L LGA+T + L+ G+ ++ P++P++ +++L A + GC A+ + + Sbjct: 430 ASIQQLWSLGALTPQGE-----LSDDGKVMANFPMNPKMTKILLLACQSGCGGSALTLLA 484 Query: 524 ALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRT 583 +S ++ +P +K++ + H F + D + + L+ K + C Sbjct: 485 MMSCENLYVQPANKRKEARNAHSIFIHETGDHVTLIRLYEAFAATPKEKQ----KDFCFE 540 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYRE--IHIALLTGLLSHIGMKDADK 641 +++ ++ + +QL ++ ++ + V E R I A+ ++ + + Sbjct: 541 KFVSLRALQFAVSVRSQLLEIAEQQKLNVQDADEENRFLLIRQAISIACPENVATQISGG 600 Query: 642 QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + SI P S F K K ++ +E V+T +L+ R + D +W + VA L + Sbjct: 601 KYKCVLDGTEISIHPSSFAFNKGMKTIVFSERVQTKKLYARWVSASDEKWTDLVAPTLTE 660 >UniRef50_B6H7B9 Pc16g02360 protein n=34 Tax=Leotiomyceta RepID=B6H7B9_PENCW Length = 672 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 225/684 (32%), Positives = 355/684 (51%), Gaps = 56/684 (8%) Query: 58 AGKVLLREAARPEITYPDNL-PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 A + L + P + P L P+++ K+++L + + V IV G+TGSGKTTQLP+ + Sbjct: 2 ASEQELSTSFIPALYKPAALLPIARHKKNLLYLVEKYPVTIVVGQTGSGKTTQLPQYLDQ 61 Query: 117 LGRGIKGLIG-HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175 G G I TQPRR+AA TVA R+AEE++ + G +GY +RF D S T +K +TD Sbjct: 62 AGWCEDGKIIAVTQPRRVAATTVATRVAEEMRCKVGEEVGYSIRFEDLTSPATRIKFLTD 121 Query: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235 G+LL E D LL +Y I++DEAHERSL D LLG LK++ +RP+L+II++SAT+ E Sbjct: 122 GMLLREALVDPLLSRYSVIMVDEAHERSLGTDVLLGTLKKIRKKRPELRIIVSSATLQAE 181 Query: 236 RFSRHFNNAP----------------IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIF 279 F R F II + GR YPV++ + D D ++ Sbjct: 182 DFLRFFAGEEYQPEAEPEDLGGSVGRIISLEGRMYPVDILFL------DSPAEDYIERAV 235 Query: 280 DAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEILPLYARLSNSEQ 332 V ++ QE GD+L+F++G EI +++ LPLYA L+ +Q Sbjct: 236 KTVFDIHTQEPEGDVLLFLTGREEIDTAIQLISERAATLHPKAPSLLPLPLYAGLTTEQQ 295 Query: 333 NRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ 390 VF+ R+++++TN+AE S+T+ GI YVID G A++ Y+ T + L PIS+ Sbjct: 296 MYVFEPTPENTRKVIVSTNIAEASVTIDGIVYVIDSGFAKLRAYNPNTGIDTLTAVPISK 355 Query: 391 ASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA 450 ASA QR GR GR G C RLY++ F PE PEI R+NLA VI+Q+ ALG+ +I Sbjct: 356 ASATQRAGRAGRTKPGKCFRLYTQQAFEQMPEARVPEIQRSNLAPVIMQLKALGIDNIVR 415 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEA 509 F F+ P I + LL LGA+ KLT PLG +++++ +DP +A+++L A Sbjct: 416 FDFLTPPPAELIIRALELLSSLGAVDD-----YAKLTKPLGMRMAEIALDPMMAKVLLVA 470 Query: 510 QKHGCVREAMIITSALSIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 C+ E + I + +++Q + +++++ R+F +E D L ++N++ + Sbjct: 471 PSFNCLSEILTIAAMVNLQGTVWVQHAGDKRSAESHRRKFAVEEGDHLTYLNVYQAFVTK 530 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE----------PAE 618 K S + CR + LNY + I QL++ ++ GI V+ + Sbjct: 531 GKKDS-----KWCRDNLLNYRALLRAVSIRGQLKRYLERFGIQVDETLSSRHGAADLSKQ 585 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETS- 677 +I L TG +H D T + P S +F + WV+ E+++T Sbjct: 586 PEQIRRCLTTGYFAHAAKMQPDGTFKTVSGGLTLHAHPTSLMFNRKADWVIFHEIMQTGE 645 Query: 678 RLWGRIAARIDPEWVEPVAQHLIK 701 + + R +I+ ++ A + Sbjct: 646 KTYIRDVTKIEKSYLLEYAPDYYR 669 >UniRef50_B7PNN0 ATP-dependent RNA helicase, putative (Fragment) n=6 Tax=Coelomata RepID=B7PNN0_IXOSC Length = 1042 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 211/703 (30%), Positives = 337/703 (47%), Gaps = 40/703 (5%) Query: 21 LRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVS 80 RD ++ + + + QA+ K+ + +LP+ Sbjct: 341 ARDAHERHKQKYELILEDAIEFVQALRVPGTKDKHKGPELSEGERKKLSLQETRRSLPIF 400 Query: 81 QKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAARTVA 139 ++D+L+AI DHQV + + SG L LG IG TQPRR+AA +VA Sbjct: 401 PFREDLLQAIADHQVSRLPTPSKSGHYKWLRARTHRLGYTANKMKIGCTQPRRVAAMSVA 460 Query: 140 NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA 199 R++EEL + G +GY +RF D S+ T++K MTDG+LL E + L Y II+DEA Sbjct: 461 ARVSEELSVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLSEPDLASYSVIIVDEA 520 Query: 200 HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR 259 HER+L+ D L G +K++ RPDLK++I+SAT+D E+FS F++API ++ GR +PV++ Sbjct: 521 HERTLHTDILFGLVKDIARFRPDLKLLISSATLDAEKFSEFFDDAPIFKIPGRRFPVDIY 580 Query: 260 YRPIVEEADDTERDQLQAIFDAVDELSQESH-GDILIFMSGEREIRDTADALNKLNL--- 315 Y E D L A V ++ GDIL+F++G+ EI + L + Sbjct: 581 Y------TKAPEADYLDACVVTVLQIHITQPLGDILVFLTGQEEIESCQELLMERTRKLG 634 Query: 316 ---RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 R ILP+Y+ L + Q ++F+ R++VLATN+AETSLT+ GI YVIDPG + Sbjct: 635 SKVRELLILPIYSNLPSELQAKIFEPTPPGARKVVLATNIAETSLTIDGIIYVIDPGFCK 694 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 + Y+ RT + L + PIS+ S + RK R C+ L + P + I Sbjct: 695 QNSYNARTGMDSLVVTPISKHSNSLRKDR------NSCLVLVFNFFTVQAPFYECNGITP 748 Query: 431 TNLASV----ILQMTALGLGDIAAFPFVEAPDKRNIQD--GVRLLEELGAITTDEQASAY 484 V G D F P + + L LGA+ Sbjct: 749 VPQEEVSECPFFLPGVWGYSDGTKSSFEVCPAFSDHSQVLALEQLYALGALN-----HMG 803 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ-DPRERPMDKQQASDE 543 +LT LGR++++ PVDP +A+M+L ++K+ C E + + + LS+ RP DK +D Sbjct: 804 ELTKLGRRMAEFPVDPMMAKMLLASEKYRCSEEVLTVAAMLSVNSSIFYRPKDKIVHADT 863 Query: 544 KHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQ 603 + F D L + ++N E ++ + C +++ + ++ +DI QL Sbjct: 864 ARKNFFSPGGDHLTLMCVYNQWAE------TDFSTQWCYENFIQHRSMKRARDIRDQLEG 917 Query: 604 VVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663 +++ + I + S+ ++ I A+ G + T I P S LF+ Sbjct: 918 LMERVEIELVSDRSDTVAIRKAITAGYFYNTARFSKGGHYKTVKHQQTVMIHPNSSLFED 977 Query: 664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSE 706 P+WV+ ELV T++ + R I+ W+ VA H K + Sbjct: 978 LPRWVIYFELVFTTKEFMRQVIEIENSWLLEVAPHYYKAKDLD 1020 >UniRef50_A2DQS5 Helicase, putative n=1 Tax=Trichomonas vaginalis RepID=A2DQS5_TRIVA Length = 785 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 224/753 (29%), Positives = 367/753 (48%), Gaps = 72/753 (9%) Query: 2 TEQQKLTFTALQQRLD------------SLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQE 49 TE +K+ LQ+ D S+ LRD R L+ +++K+ + Sbjct: 41 TELEKIELDNLQKTADYVQKYNATDESLSVNLRDSTETGRTLN--ERLKSAGRLSVLQDA 98 Query: 50 MAKEIDQ-------AAGKVLLREAARPEI-----------------TYPDNLPVSQKKQD 85 A I + + + +P I +LPV + K+ Sbjct: 99 YATNIKKETTWENEKIESAYMDKTQKPTIFTLPPREDLIVKEIDYTEVQQSLPVFKYKKT 158 Query: 86 ILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEE 145 +L+A+ + V++V G+TGSGK+TQ+P+ +E R + TQPRR+AA +VA R+AEE Sbjct: 159 LLDALVSNHVLVVVGDTGSGKSTQIPQYLLE--RSPNESVVCTQPRRVAAMSVAARVAEE 216 Query: 146 LKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLN 205 E G +GY VRF D S+ T ++ MTDG LL E D LL +Y T++IDEAHERS++ Sbjct: 217 RHVELGFEVGYAVRFDDKTSEFTKIRYMTDGTLLREFLVDPLLSKYTTVMIDEAHERSIS 276 Query: 206 IDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVE 265 D LL LK+L+ RP+ ++++ SAT+D S ++ PI+ V GR + V++ Y Sbjct: 277 TDILLSLLKDLMQVRPEFRLVVASATLDAASMSDFYDKCPILTVPGRRFTVDINY----- 331 Query: 266 EADDTERDQLQAIFDAVDELSQ----ESHGDILIFMSGEREIRDTA----DALNKLNLRH 317 + D A D V ++ E DIL+F++G+ EI + + ++ + + Sbjct: 332 -TNTPVVDYEIAAIDTVVKIHTSTEIEQPCDILVFLTGQDEIDRSVAKINELISSKVINN 390 Query: 318 TEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 E LPLY+ L + Q+ +F+ R+++ +TN+AETSLT+ +KYVID G + Y Sbjct: 391 IEALPLYSALPSERQSLIFKPAPRGTRKVIFSTNIAETSLTIDTVKYVIDCGLVKEMSYD 450 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLA 434 + L PIS++SA+QR GR GR S GIC RLY+E F + T PEI R + A Sbjct: 451 SKNGCSSLDRVPISKSSADQRAGRAGRTSHGICYRLYTESSFEFEHEQMTKPEIKRCDFA 510 Query: 435 SVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLS 494 +L + ++G+ DI F FV++P NI L L A+ D LT LG Q+S Sbjct: 511 PTLLLLISMGITDIVNFNFVDSPATNNIISAYEQLGALQALDNDGN-----LTELGEQMS 565 Query: 495 QLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDP-RERPMDKQQASDEKHRRFHDKES 553 QLPV P AR +L++ + GC + I S L P ++ + + ++F+D+E Sbjct: 566 QLPVSPMCARAILKSFELGCSESVITICSVLESGSPLFYFSQNESKDAIAHIKQFYDEEG 625 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613 D + +N++N + + ++ C + + + + ++I QL + + L + Sbjct: 626 DHIMCLNVYNQWVDAE------YSQQWCIGNKVQHRTLLNAKNIKNQLSDICQILNFVED 679 Query: 614 SEPAE--YREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP-KWVMV 670 I A G + ++ T I P S L + ++++ Sbjct: 680 ESKKNETSENISHAFCMGFFLNCAQLMSNGYYQTLRGQGEVKIHPSSCLLQYTAQQYLIF 739 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 EL +T+ ++ R R PEW+ +A ++ Sbjct: 740 YELSKTTDIFMRTLMRTKPEWLREIAPRYFEKN 772 >UniRef50_Q9VL25 CG4901 n=10 Tax=Drosophila RepID=Q9VL25_DROME Length = 694 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 221/662 (33%), Positives = 351/662 (53%), Gaps = 34/662 (5%) Query: 52 KEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLP 111 +I Q +LL +LPV + IL+ + + V++ ETGSGKTTQ+P Sbjct: 43 AQIKQTIAPILLTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIP 102 Query: 112 KICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVK 171 + + G G+IG TQPRR+AA TVA R+A+EL G +GY VRF D S T ++ Sbjct: 103 QFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIR 162 Query: 172 LMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD-----LKII 226 +TDG+LL E +DRLL++Y II+DEAHER++N D L G +K+ R LK++ Sbjct: 163 FLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVV 222 Query: 227 ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 +TSAT+D + F +F N + + GRTYPV V + + D + + + + Sbjct: 223 VTSATMDIDHFGNYF-NCKGMYLEGRTYPVRVMH------TKEEHEDYIHTVLVTLFHIH 275 Query: 287 QESHG--DILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVF-- 336 + + D+LIF++G+ EI A + +L + LYA+LS +Q F Sbjct: 276 RTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVP 335 Query: 337 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 + R+++LATN+AETS+T+PGI+ VID G + ++ + L IS+A A QR Sbjct: 336 TPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQR 395 Query: 397 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GR ++G C R Y++ + S + T PEILRTN S++LQ+ AL + D F F++ Sbjct: 396 AGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDP 454 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 P + ++ + L+ LGAI T + + +TPLGRQ+ Q P+DP+ ++++L A GC+ Sbjct: 455 PLEDGLRSAYKSLDALGAIKTGDDSY---ITPLGRQMVQYPLDPKYSKLLLTASSFGCME 511 Query: 517 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNA 576 E + + S LS +K + + H +F K D L +N++N L S Sbjct: 512 EILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF------LKSEK 565 Query: 577 FRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 + C +YLN + +++ QLR++ + L + +NS + + +L G +I + Sbjct: 566 PKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSS-DDIEMLKKCILNGFFENIAV 624 Query: 637 KDADKQEYTGARNARFSIFPGSGLFKK-PPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 D T + N R I P S L K P +++ E+V+T + + R I EW++ V Sbjct: 625 LQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEV 684 Query: 696 AQ 697 Sbjct: 685 VP 686 >UniRef50_Q38AN5 Pre-mRNA splicing factor ATP-dependent RNA helicase, putative n=7 Tax=Trypanosomatidae RepID=Q38AN5_9TRYP Length = 1062 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 220/697 (31%), Positives = 353/697 (50%), Gaps = 34/697 (4%) Query: 23 DRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQK 82 DR R + + ++ K + + E + +LP+ Sbjct: 346 DRELLERPEEHLHRGGLGRGSRSALPPWMKHSFGEKPRFGMMETSESLAEQRRSLPIYAF 405 Query: 83 KQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRI 142 + L+ + H V ++ GETGSGKTTQ+P+ +E G G G++ TQPRR+AA T+A R+ Sbjct: 406 RDRFLQHVDAHAVTVLVGETGSGKTTQIPQYLVEHGYGKNGVVCCTQPRRVAAETLAIRV 465 Query: 143 AEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202 AEE G +GY VRF D S T +K MTDG+LL E D +Y II+DEAHER Sbjct: 466 AEEYGCRLGEEVGYTVRFRDVTSSLTCIKYMTDGMLLREALLDDSFQRYSVIILDEAHER 525 Query: 203 SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP 262 S+N D L ++ +RP LK+I+TSAT++ E+F +FN + + GRT+PV+ + Sbjct: 526 SVNTDLLFAIVRNATHKRPTLKVIVTSATLEREKFCSYFNVHDVFFIEGRTFPVDTYFL- 584 Query: 263 IVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIR----------DTADALN 311 + D L V +L +E GD+L+F++G+ EI + L+ Sbjct: 585 -----AEPTEDYLDCALKTVMKLHLEEPPGDVLVFLTGQEEIEFGGDRLFRWMERLRGLS 639 Query: 312 KLNLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTA 369 L + ILPL A L Q+RVF+ R++VLATNVAETS+T+ + YV+D G + Sbjct: 640 DLPVPDMLILPLTATLPQDVQSRVFEPTPPHCRKVVLATNVAETSITISNLSYVVDSGYS 699 Query: 370 RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEI 428 + + + +T +++L I PISQA A QR GR GR+ G C R+Y+E F T P+I Sbjct: 700 KQNVFDPKTGMEQLKIMPISQAQARQRAGRAGRIGPGKCFRMYTEIQFRQDMDPATVPDI 759 Query: 429 LRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTP 488 R+NL V+LQ+ A+G+ D+ A ++ P + + ++ L L A+ D LTP Sbjct: 760 QRSNLFHVVLQLKAMGINDLFALDLMDPPPQETLVTALQKLRYLEALDEDGL-----LTP 814 Query: 489 LGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ--DPRERPMDKQQASDEKHR 546 LG +++ LP+DP ++ +L A GC + I S L+ Q RP D+ +A+D R Sbjct: 815 LGGRMAHLPIDPSHSKTLLTAVDLGCSEPVLTIVSMLAAQKRGVFYRPRDQHEAADAAKR 874 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVK 606 +FH E D + + +++ + C+ ++L + + E +D QL ++++ Sbjct: 875 QFHQPEGDHITLLAVYDAWVA------NGLSENWCKRNFLKHRMLMEARDTRDQLSEMLR 928 Query: 607 ELGIPV-NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 + + + + E+ A+ G + + D T A + P S L PP Sbjct: 929 KRHTNIEHHNDSSLTEVRRAITAGYFFNAARRITDVAYATLAERREVYVHPSSCLRDTPP 988 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 K+++ E+ TSR + R I+P W+ +A + Sbjct: 989 KYLLYNEVQLTSREYMREILAIEPRWLVELAPAFYSK 1025 >UniRef50_Q55EC3 DEAD/DEAH box helicase n=1 Tax=Dictyostelium discoideum RepID=Q55EC3_DICDI Length = 716 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 207/707 (29%), Positives = 345/707 (48%), Gaps = 90/707 (12%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 + +LP+ Q ++ IL + + +++ G TG GK+TQ+P+ E Sbjct: 35 NDNFIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFE 94 Query: 117 LGRGIKGL-IGHTQPRRLAARTVANRIAEELKTE-PGGCIGYKVRFSDHVSD-NTMVKLM 173 G I TQPRR+AA ++A R+A+E+ + G +GY VRF + +SD T +K + Sbjct: 95 SGWSDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYV 154 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPD----------L 223 TDG+L+ E+ D LL++Y I+IDEAHERSL D L+G LK++ +R L Sbjct: 155 TDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSL 214 Query: 224 KIIITSATI---------------DPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEAD 268 K+II+SAT+ D + + + I+ + GRTYPV++ Y + Sbjct: 215 KLIISSATLNANDFFNFFNYNQTNDKSK-----DTSTILSIEGRTYPVDIHYL------E 263 Query: 269 DTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKL-------------- 313 ++ + +Q + ++ + GDIL+F++G+ EI L+ Sbjct: 264 ESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQ 323 Query: 314 ---NLRHTEILPLYARLSNSEQNRVFQSHS----GRRIVLATNVAETSLTVPGIKYVIDP 366 +LP+Y+ LS ++Q +VF+S R+I+++TN+AETS+T+ G+ YV+D Sbjct: 324 QQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDC 383 Query: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTD 425 G +I Y + ++ L I P S++SANQR GR GR G C RLY+E + P+ T Sbjct: 384 GFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTI 443 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI R+NL + ILQ+ ALG+ +I F F+ P ++ G+ +L LGA+ + K Sbjct: 444 PEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEVLYGLGALDDNG-----K 498 Query: 486 LT-PLGRQLSQLPVDPRLARMVLEAQK--HGCVREAMIITSALSIQDPRERPMDKQQASD 542 LT P G +++ P DP ++M++++ C E + IT+ L+IQ K Sbjct: 499 LTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLFTNQNHK----- 553 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 + KE D L +N++N +S+ + + C +NY ++ + QL Sbjct: 554 -SRKHLLVKEGDHLTLLNIFNSF------ISNQSSPQWCNQHQINYKAMQRVLQVRKQLL 606 Query: 603 QVVKELGIPVNSEPAEYRE-------IHIALLTGLLSHIGMKDADKQEYTGARNARFSIF 655 K+ I V S I A+++G ++ D T + + Sbjct: 607 AYAKKYSINVISCFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIREKHKLWLH 666 Query: 656 PGSGL-FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 P S L P+WV+ E+ T++ + + I+P W+ +A H K Sbjct: 667 PTSVLCLSNSPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYK 713 >UniRef50_B0ECZ2 ATP-dependent RNA helicase, putative n=2 Tax=Entamoeba RepID=B0ECZ2_ENTDI Length = 664 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 206/675 (30%), Positives = 336/675 (49%), Gaps = 49/675 (7%) Query: 57 AAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME 116 ++L + + + LP+ Q K DI+ ++ HQ ++V GETG GKTTQLP+ +E Sbjct: 6 PNKPIILSKERVALLRQREQLPIRQSKDDIISELKKHQTMVVVGETGCGKTTQLPQFILE 65 Query: 117 LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDG 176 IG TQPRR+AA T+A R+++E+ G +GY+VRF + +S +T ++ +TDG Sbjct: 66 SNICEGKKIGVTQPRRVAAITLAERVSKEVGCRVGTTVGYRVRFEEKMSKDTKIEYLTDG 125 Query: 177 ILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPER 236 +LL D L Y I++DEAHER+++ D L+G L+ +L RR DLK+++ SAT+D + Sbjct: 126 MLLRTALLDPDLKSYGVIVLDEAHERTVHTDILIGLLRGILRRRKDLKVVVMSATLDSQL 185 Query: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILI 295 FS F P + ++GR +P+E+ + ++E + A A+ +L GDIL+ Sbjct: 186 FSNFFAG-PTLTIAGRQHPIELFHL------TESEDSPVDASITAILQLHMSAGPGDILV 238 Query: 296 FMSGEREIRDTADALNKLN------LRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLA 347 F+ G+ I AL + ++ ++LPLYA L +Q +F R+IVL+ Sbjct: 239 FLPGQDAIESVEAALLERMKNAPATVKPIQVLPLYAALPPEQQLLIFSPPPPDTRKIVLS 298 Query: 348 TNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGI 407 TN+AETS+T+PG+++VID G + Y + ++ L +S+A A QR GR GR + G Sbjct: 299 TNIAETSVTIPGMRFVIDTGLVKEKEYQSKIGMEALKTTWVSKAQAMQRAGRAGREAPGQ 358 Query: 408 CIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 C RLY+ F T PEI R +L V+LQ+ AL + D+ F F++ P +I Sbjct: 359 CYRLYTSKRFSEFSATTTPEIQRCSLDGVVLQLKALNVIDVTQFDFLQPPSGDSISRAEI 418 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L +LGA+ ++TPLG+ + LPV P AR ++ A + C+ + I + L++ Sbjct: 419 NLSKLGALEN------GRITPLGKVMVALPVAPPFARTIIAAAQSNCLAHILCIVAMLAV 472 Query: 528 Q-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 ++ + + R + D ++L+ K + N +R C + L Sbjct: 473 DTQFFVSAPSIREKAQQSMRMYSSDNGDHFMLLSLYLAF----KKVGVNRRKRWCVENAL 528 Query: 587 NYLRVREWQDIYTQLRQVV-------------KELGIPVNSEPAEYR--------EIHIA 625 NY + + QL Q KE N + I A Sbjct: 529 NYKALNTALSTHDQLVQYCVGILDKELKGSTAKEQCTEENMKRIINEAIPETIIKSIKKA 588 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAA 685 L G ++ ++ D Y I P S + K K+V+ AELV T++ + R Sbjct: 589 FLVGFPDNVAIRQPDNT-YLTTTQKIVHIHPSSCVHNKKQKYVLFAELVYTTKPFIRSVL 647 Query: 686 RIDPEWVEPVAQHLI 700 ++ E ++ +LI Sbjct: 648 SLESELIQEEMPNLI 662 >UniRef50_A5E397 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E397_LODEL Length = 1015 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 212/604 (35%), Positives = 340/604 (56%), Gaps = 28/604 (4%) Query: 36 KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQV 95 K + P+ + ++ + K L++++ + +LP+ + K+D++ IRD+Q Sbjct: 387 KKEKPEQEDEQLKQYMASFKKNKPKKLIKQSRKSIQELRKSLPIYKMKRDLINQIRDNQF 446 Query: 96 VIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 +++ GETGSGKTTQ+ + E+G +IG TQPRR+AA +VA R+AEE+ GG +G Sbjct: 447 LVIVGETGSGKTTQIVQYIYEVGLNQSKIIGCTQPRRVAATSVARRVAEEMDVHLGGLVG 506 Query: 156 YKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKE 215 Y VRF D S NT +K +TDG+LL E D L +Y I++DEAHER++ D L G LK+ Sbjct: 507 YNVRFDDKTSTNTKIKYLTDGMLLREALTDPSLSKYSVIMLDEAHERTIATDVLFGLLKK 566 Query: 216 LLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQL 275 P+LK+I+TSAT+D +FS+ FN+ P+I + GRT+PV++ Y + E D L Sbjct: 567 AAKANPNLKVIVTSATLDSNKFSKFFNSCPVINIPGRTFPVDIVY------TNKPEMDYL 620 Query: 276 QAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLS 328 A D+V ++ E GDIL+F++G+ EI ++ L + ILP Y+ L Sbjct: 621 AAAIDSVCQIHISEPAGDILVFLTGQEEIEVASEILQERMKMLQPNDPLMIILPCYSSLP 680 Query: 329 NSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 + EQ R+F+ R++VLATN+AETSLT+ GIKYV+D G +++ + L I Sbjct: 681 SDEQLRIFEETPAGMRKVVLATNIAETSLTIDGIKYVVDSGYCKLNLQDVTLGLDMLKIC 740 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446 PISQA A+QR GR GR G C RLY+E + + PEI R NLAS +L + A+ L Sbjct: 741 PISQAQASQRSGRAGRTGPGKCYRLYTESIYSKLAPSSTPEIRRRNLASSVLMLKAMHLS 800 Query: 447 DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV 506 F +++ P + + + L++L A+ ++T LG LS++P +P LA+ + Sbjct: 801 ---TFEWMDPPSMQAVNAAYKQLKQLKALDEK-----LEITKLGVDLSKIPTEPSLAKCI 852 Query: 507 LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566 L +++ GC E + I + LSIQ+ RP +++ +D+ R+ SD + + ++ Sbjct: 853 LLSEEMGCTMEMLAIVAMLSIQNVFHRPKAQRKLADQVIARWTHSISDHITLLRVYTEFV 912 Query: 567 EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIAL 626 + + A + C+ +++ + +R+ Q I QLR + + + S+ E R I L Sbjct: 913 KVESARKLD----WCKRNFVQHSSLRKAQQIVEQLRSICRFNNRDLQSKQKE-RIILNCL 967 Query: 627 LTGL 630 GL Sbjct: 968 TNGL 971 >UniRef50_B3SBV6 Putative uncharacterized protein n=2 Tax=Fungi/Metazoa group RepID=B3SBV6_TRIAD Length = 679 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 218/729 (29%), Positives = 343/729 (47%), Gaps = 98/729 (13%) Query: 13 QQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEIT 72 ++R+D +RL ++ + E I+ K + + Sbjct: 6 KRRIDVEPSSRVDSKKKRLDVGSNGQSRNVTDGARSENRSNIN-PYNKQAYSDRYYDILK 64 Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQ-----------LPKICMELGRGI 121 LPV + K+ IL +R +Q ++ GETGSGKTTQ +P+ C+EL G Sbjct: 65 KRTKLPVWEYKEKILSTLRKNQATVLVGETGSGKTTQFKQRDVWGGSYIPQWCVELVSGR 124 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181 +G + TQPRR+AA +VA R++EE+ G +GY +RF D S NT++K MTDG+LL E Sbjct: 125 RG-VACTQPRRVAAMSVAQRVSEEMDVTLGQQVGYSIRFEDCTSPNTLLKYMTDGMLLRE 183 Query: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF 241 D LL +Y I++DEAHER+L D L+G LKE++ R DLKI+I SAT+D +F Sbjct: 184 AMNDPLLERYSVILLDEAHERTLATDILMGLLKEIVSNRSDLKIVIMSATLDAGKFQ--- 240 Query: 242 NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGER 301 D + Sbjct: 241 -------------------------------DYFEGAPLL-------------------- 249 Query: 302 EIRDTADALNKLNLR------HTEILPLYARLSNSEQNRVFQSHSG-------RRIVLAT 348 EI D + + +++PLY+ L S Q R+F+S R+IV++T Sbjct: 250 EIEDACRRIRQEVQNLGNEAGDVKVIPLYSTLPPSAQQRIFESAPPSRNERIGRKIVIST 309 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AETSLT+ G+ +V+DPG A+ Y+ R +V+ L + PIS+AS+ QR GR GR G C Sbjct: 310 NIAETSLTIDGVVFVVDPGFAKQKVYNPRIRVESLLVTPISKASSQQRAGRAGRTRPGKC 369 Query: 409 IRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVR 467 RLY+E F E T PEILR+NL +V+L + LG+ D+ F F++ P + + Sbjct: 370 FRLYTEKAFQTEMQENTYPEILRSNLGTVVLHLKKLGIDDLVHFDFMDPPAPETLMRALE 429 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 LL LGA+ D LT LG +++ P+DP+LA+M++ + + C E + ITS LSI Sbjct: 430 LLNYLGALNDDGD-----LTDLGSLMAEFPLDPQLAKMLIASTGYNCSNEILSITSMLSI 484 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 RP D ++A+DE +F + D L +N+++ + ++ + C ++L Sbjct: 485 PQVFLRPNDAKKAADEAKAKFGHIDGDHLTLLNVYHAYKQNKED------SQWCYDNFLQ 538 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNSEPAEYR----EIHIALLTGLLSHIGMKDADKQE 643 ++ ++ QL ++ + +P S R I AL+ G + Sbjct: 539 SRSLKSADNVRQQLAGIMDKHSLPRKSTDFNSRDYYLNIRKALVAGFFMQAAHLERAGHY 598 Query: 644 YTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 T N + P + L K P+WV+ E V T++ + R + P+W+ + + Sbjct: 599 LTVKDNQVVHLHPSTCLSHK-PEWVIYNEFVLTTKNYIRTVTEVKPDWLVTASPNYYDMA 657 Query: 704 YSEPHWERA 712 P Sbjct: 658 NF-PECSAK 665 >UniRef50_B0CX49 Predicted protein n=2 Tax=Agaricales RepID=B0CX49_LACBS Length = 706 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 210/697 (30%), Positives = 338/697 (48%), Gaps = 44/697 (6%) Query: 23 DRLRFSRRLHGVK----KVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLP 78 DR + R+ + N + L AA+ LP Sbjct: 6 DRSQNGRQHKKARLSYGNPSNDHGNTFGHTNGREANHAGPSSAPLNPAAQAIQEQRKQLP 65 Query: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138 + ++E I+ + V ++ GETGSGKTTQ+P+ +E G +I TQPR++AA ++ Sbjct: 66 IYLGADALIEEIKKNDVTVLLGETGSGKTTQVPQYLLESGLAGNRMIAVTQPRKVAATSL 125 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 A R+A E G +GY VRF + S +T +K MTDG+++ E+ D L +Y +I+DE Sbjct: 126 AQRVAAEQNGPLGKVVGYAVRFDEKSSPHTRIKYMTDGMIMRELMSDPSLSRYSVVIVDE 185 Query: 199 AHERSLNIDFLLGYLKELLPRR---------------PDLKIIITSATIDPERFSRHFNN 243 AHER+L D L+ LK+L R LKI+I SAT+D E+FS+ F+N Sbjct: 186 AHERTLRTDLLIANLKKLQKERNGSSNAKGKGNSNNSKPLKIVIMSATLDAEKFSKFFDN 245 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGERE 302 A I+ V GR +PV++ + + + D + + ++ + GD+LIF+ G+ + Sbjct: 246 AKILYVKGRQHPVKIFHS------AEGQPDYVDSAMRTFFQIHTDQPPGDVLIFLPGQED 299 Query: 303 IRDTADALNK------LNLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETS 354 I +++ + + P++A + + +VF + R+ +LATN+AETS Sbjct: 300 IESLEKSIDMFAKRLPQDSPEVLVCPMFAAQAPGKNAKVFLSPPPNTRKCILATNIAETS 359 Query: 355 LTVPGIKYVIDPGTARISRYSYRT--KVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 +T+PG+KYVID G + +Y R L I+++SA QR GR GR G+C RLY Sbjct: 360 ITIPGVKYVIDTGKCKEKQYLARMAGGFDTLLTRDITKSSAMQRAGRAGREGSGLCFRLY 419 Query: 413 SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472 +ED F S +PEILR +L S ILQ+ LG D+ ++APD I ++ L + Sbjct: 420 TEDAFNSMALSGEPEILRCSLTSSILQLRCLG-QDLMELDLMDAPDTDTICSALKTLFII 478 Query: 473 GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PR 531 GA Q LTP GR ++ P++P+ A ++ +++HGC E + + S LS Sbjct: 479 GAFDKQSQ-----LTPAGRHMASFPLEPQHACAIVASKEHGCSSEVIDVISVLSASSKLF 533 Query: 532 ERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 +K+ A E R+F D L +N+ + + + CR +LN + Sbjct: 534 LDVTEKRDAVSEARRKFRHPSGDHLTILNVVRAYQAIASSEKKKSRKDWCRKHFLNERTL 593 Query: 592 REWQDIYTQLRQVVKELGIP-VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 E ++I QLRQ +G+ S + L GL+++ D ++ Sbjct: 594 IEAREIREQLRQTCTRVGVDYTTSCGENEGPVIACLGHGLVANSAFLQPDGSYKQTMGSS 653 Query: 651 RFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARI 687 I PGS L K ++ ELV T++++ R + I Sbjct: 654 FVKIHPGSTLSDKKVPAIVYDELVYTNQIYARGVSSI 690 >UniRef50_P20095 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 n=11 Tax=Saccharomycetaceae RepID=PRP2_YEAST Length = 876 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 219/694 (31%), Positives = 353/694 (50%), Gaps = 63/694 (9%) Query: 48 QEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 +++ E A + LPV Q K ++L+ I+ +QV+I+ GETGSGKT Sbjct: 194 EKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKT 253 Query: 108 TQLPKICMELGRGIKGL--IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS 165 TQLP+ +E G +G I TQPRR+AA +VA R+A+E+ G +GY++RF D + Sbjct: 254 TQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTT 313 Query: 166 DN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLK 224 N T++K MTDG+LL E D L +Y I+IDEAHER+L D L+G LK++LP+RP LK Sbjct: 314 PNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLK 373 Query: 225 IIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDE 284 ++I+SAT++ ++FS F+N PI V GR YPV++ Y E + + A + + Sbjct: 374 LLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHY------TLQPEANYIHAAITTIFQ 427 Query: 285 LSQES--HGDILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNRVF 336 + GDIL+F++G+ EI T L ++ + I P+YA L +Q ++F Sbjct: 428 IHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIF 487 Query: 337 QSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 Q R++VLATN+AETSLT+ GI+YVIDPG + + Y T + +L P S+AS + Sbjct: 488 QPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVD 547 Query: 395 QRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPF 453 QR GR GRV G C R++++ + PEI RTNL++ +L + +LG+ D+ FP Sbjct: 548 QRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPL 607 Query: 454 VEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH- 512 ++ P ++ + L LGA+ + +T LG+ + + P +P A+++ A H Sbjct: 608 MDKPSIPTLRKSLENLYILGALNSKG-----TITRLGKMMCEFPCEPEFAKVLYTAATHE 662 Query: 513 ---GCVREAMIITSAL-SIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 G + E + I S L Q D + ESD + ++ ++N Sbjct: 663 QCQGVLEECLTIVSMLHETPSLFIG-----QKRDAAASVLSEVESDHILYLEIFNQWR-- 715 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAE---------- 618 +S R C+ + + + ++I QL + +++G+ ++ A Sbjct: 716 ----NSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYI 771 Query: 619 YREIHIALLTGLLSHIGMKDADKQEYTGAR---NARFSIFPGSGLF-------KKPPKWV 668 I ++G +I T R S+ P S LF ++P K+V Sbjct: 772 NARITRCFISGFPMNIVQLGPTG-YQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYV 830 Query: 669 MVAELVETSRLWGRIAARI-DPEWVEPVAQHLIK 701 + +L+ TS+ + R I EW+ + + K Sbjct: 831 LYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFK 864 >UniRef50_C9ZMN0 ATP-dependent RNA helicase, putative n=4 Tax=Trypanosoma RepID=C9ZMN0_TRYBG Length = 742 Score = 740 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 221/695 (31%), Positives = 354/695 (50%), Gaps = 50/695 (7%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQ--AAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 K + +E + + + K + LPV Q+ +++ + Sbjct: 36 SNNDKNSGGGGGHSTREESSAMLPKLNPFTKKPYTPQYYKILAQRTTLPVYQRAKELTQN 95 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 +RDHQVV+ GETGSGKTTQ+P+ E+ G++ TQPRR+AA ++A R+A E+ + Sbjct: 96 MRDHQVVLFVGETGSGKTTQVPQFISEMEL--PGVVVCTQPRRIAAMSIAVRVAAEMDVQ 153 Query: 150 PGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFL 209 G +GY+VRF VSD T + MTDG+LL E DR L + +++DEAHER++ D L Sbjct: 154 LGEEVGYRVRFKSMVSDKTKLLYMTDGMLLREAFSDRDLSRISVVVVDEAHERTVETDVL 213 Query: 210 LGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD 269 LG L+ L+ RR D ++++ SAT+D ERF +F AP+I+V GR Y V+V Y + Sbjct: 214 LGVLRLLMQRRQDFRLVVMSATLDMERFQAYFPKAPLIQVEGRMYDVQVLYSTV------ 267 Query: 270 TERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADA----LNKLNLRH------- 317 +D ++A + V ++ E GDIL F++GE EI L L Sbjct: 268 PVKDYVEACVERVCDIHLNEPPGDILCFLTGEAEIERAVSRTKLKLEHLLADDGNTVSSN 327 Query: 318 -----TEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 +LPLY L +Q RVF + R+I+ ATN+AETSLT+ GI YV+D G + Sbjct: 328 GAQLLARVLPLYGSLGVDDQGRVFSNAGKNTRKIIFATNIAETSLTIDGIVYVVDCGYHK 387 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 S Y+ +V L IS+ASA QRKGR GR G C RL+ + DF S P T PE+LR Sbjct: 388 QSLYNAEARVDYLLPAVISKASAEQRKGRAGRTRPGKCFRLFQQSDFSSFPNQTHPEVLR 447 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 +N+ + +L + L + + F F++ P ++++ D L GA+ D +LT G Sbjct: 448 SNMINTVLLLLKLDVTNPYQFAFIDPPSQQSVMDAYCQLSLFGAVDDD-----LQLTDFG 502 Query: 491 RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD 550 R ++ PVD LAR+++ + ++GC +A +I + L ++ RP + +++KH F Sbjct: 503 RLMADFPVDACLARVLMRSAQYGCAADAAVIVAMLETRNVLVRPASRGIEAEQKHVMFRH 562 Query: 551 KESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGI 610 + D L +++ S + C ++L Y +++ ++YTQL +++K+ I Sbjct: 563 PDGDHLTLFKVFHAFWR------SGQSSQYCFDNFLAYQALQQAVNVYTQLTKLMKKKNI 616 Query: 611 PVNSEPA------EYREIHIALLTGLLSHIGMKDADKQ-EYTGARNARFSIFPGSGLFKK 663 S + I A+L G + + K + T + ++ S Sbjct: 617 CFVSTYDDRSGKLDSVAIRKAVLEGFFTQVAYKPPGGELYKTVRDSQMVALHRHSFPSMS 676 Query: 664 -PPKWVMV--AELVETSRLWGRIAARIDPEWVEPV 695 P W++ E+ + R+A+ I+PEW+ V Sbjct: 677 GSPSWIVYDRLEVQGQGGTFIRVASAIEPEWLLEV 711 >UniRef50_A4RXZ6 Predicted protein n=7 Tax=Eukaryota RepID=A4RXZ6_OSTLU Length = 713 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 218/707 (30%), Positives = 353/707 (49%), Gaps = 68/707 (9%) Query: 49 EMAKEIDQAAGKVLLREAARPEITYPDN-LPVSQKKQDILEAIRDHQVVIVAGETGSGKT 107 ++ + D + + + ++ LP++ +++ + HQ ++ G TG GKT Sbjct: 24 DVDADADATGTLIQFEKNPKASLSARRRALPIAAHADELMYCVEKHQTTVIVGHTGCGKT 83 Query: 108 TQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSD-HVS 165 TQ+P+ + G G + TQPRR+AA+TVA R+AEE+ G +GY +RF D Sbjct: 84 TQIPQYLRDGGWCGGGATVAVTQPRRVAAQTVAQRVAEEVGCVIGDTVGYAIRFEDVCTP 143 Query: 166 DNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKI 225 T +K TDG LL E+ +D LL +Y +I+DEAHER+L D LLG LK++ R DL++ Sbjct: 144 GKTEIKFCTDGALLRELAEDPLLTKYSVVIVDEAHERTLATDVLLGLLKKVQRARRDLRL 203 Query: 226 IITSATIDPERFSRHFNNA------------PII-EVSGRTYPVEVRYRPIVEEADDTER 272 I++SATI E F+ F+ + PII V GR + V + Y D+ Sbjct: 204 IVSSATIQAESFAAFFDASGEDDDGDGPSRKPIIMSVEGRAHGVLIHYL------DEPTG 257 Query: 273 DQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKLNLR------------HTE 319 D + + + E+ + E GDILIF++GE EI D + L + Sbjct: 258 DYVLSAVETALEVHRNEGPGDILIFLTGEGEIDDAVNLLEEEAREMKRDPRRSHDALDLV 317 Query: 320 ILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 + PLYA L+ + Q F+ R++V+ATNVAETS+T+ G+ YVID A+ + Sbjct: 318 VCPLYAGLNPAAQLEAFRPPRRGARKVVVATNVAETSVTIEGVVYVIDSCFAKQKAFDPE 377 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 ++ L + P S+AS NQR GR GRV G C RL +E D+ S + T PEI+R++LAS + Sbjct: 378 RGMESLFVAPASKASTNQRAGRAGRVRPGKCFRLCTEIDYRSLADVTAPEIVRSDLASTV 437 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQL 496 LQ+ A+G+ +I F +V P N+ + LL L A+ D KLT PLG L+++ Sbjct: 438 LQIKAMGIDNIMNFEWVSPPPAANMIKALELLYALRALDDDA-----KLTSPLGVHLAEI 492 Query: 497 PVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFL 556 P++P+L +M+L + + GCVREA+ + + + +Q +++ DE RF +E D + Sbjct: 493 PLEPQLGKMLLVSGEMGCVREALTVAAYMQVQSLWVTHRGQKKRLDEMRDRFAVEEGDAV 552 Query: 557 AFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN-SE 615 +N+ + + + + + LN+ + D+ +QL++ + LG+ N S Sbjct: 553 MMLNIHDAYCDARNQ------AKFASNNMLNHRALLRAGDVRSQLKKHLARLGVVTNSSC 606 Query: 616 PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFS---------------IFPGSGL 660 + I A+ G ++ G + F I P S L Sbjct: 607 GDDTVPIRRAIAAGFFANAATLAPYGG---GPDGSVFHSLRAMSARARARELRIHPSSAL 663 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 F+ P+ V V T R + R ++ +W+ +A H + + P Sbjct: 664 FRSRPQCVAYCSAVRTDREYMRDVTVVEADWLRELAPHFYRAVSANP 710 >UniRef50_UPI0000DB6CD8 PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 33 n=2 Tax=Apocrita RepID=UPI0000DB6CD8 Length = 694 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 206/660 (31%), Positives = 339/660 (51%), Gaps = 35/660 (5%) Query: 52 KEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLP 111 ++ Q + + +LPV + ++ +LE IR + +IV GETGSGKTTQ+P Sbjct: 43 EDSQQNVQTENVDKGNITLQQQRKSLPVYRLRKRLLEEIRRNSTLIVIGETGSGKTTQIP 102 Query: 112 KICMELGRGI-KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMV 170 ++ + G G IG TQPRR+AA +VA R+A+E E G +GY VRF D S T + Sbjct: 103 QLLLSSGIAGCSGCIGVTQPRRVAAVSVARRVAQEQGVEAGKLVGYCVRFEDVTSPQTRI 162 Query: 171 KLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKII---- 226 K +TDG+++ E D +L Y +I+DEAHERS+ D LLG + R + Sbjct: 163 KYLTDGMMVREAMTDEILSDYSVVILDEAHERSVQTDVLLGVARRAQNLRKLKNLPPLKL 222 Query: 227 -ITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL 285 + SAT+D ++F+++F AP + + GR +PV++ + A ++ D + ++ Sbjct: 223 LVMSATMDVDKFTKYFQ-APAVYLEGRQHPVKIYH------AVKSQDDYAFSALVTAFQI 275 Query: 286 SQESHG--DILIFMSGEREIR-------DTADALNKLNLRHTEILPLYARLSNSEQNRVF 336 +++ DIL+F++G+ EI A L+ ++ PLY+ L +Q F Sbjct: 276 HRDNPANEDILVFLTGQEEIEAAAVSARQVAKQLDGQGYPSLKVFPLYSALPTHQQLEAF 335 Query: 337 QS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 + R+++L+TNVAETS+T+ GI++VID G + + T + L +E +S+A A Sbjct: 336 KPSPPGMRKLILSTNVAETSVTIGGIRHVIDTGVVKARTHHPTTGLDVLRVEKVSKAQAW 395 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GR GR + G C R Y++++F E PEI R +LA V LQ+ A+G+ DI F F+ Sbjct: 396 QRTGRAGREAAGKCYRTYTKEEFERMKEMPVPEIQRCSLAGVALQLLAIGV-DITTFDFM 454 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 + P K + V LE+LGA+ + S +LT LGR +S P+DPR +++L + +H C Sbjct: 455 DKPPKEAVDVAVTCLEKLGAV----KGSPPQLTTLGRTMSLFPLDPRFTKVILASVEHQC 510 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 + EA+ + S LS + P K+Q + RF E D + +N++ ++ Sbjct: 511 LEEALTVVSLLSGESVFTDPPAKRQQAYVARSRFASPEGDHVTLLNVFRGYT------NT 564 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 + C ++L++ + ++ QL + + S + ALL GL ++ Sbjct: 565 KQKKVWCHDNFLHHRNLEYAVEVRHQLAALADRANLERASCGTSTDRLRKALLEGLHDNL 624 Query: 635 GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 D+ T + SI P S L P ++ E++ T R + R + ID W+ Sbjct: 625 AELQRDQTYVTVSSKQPVSIHPSSTLHATKPPLILFTEVIATGRCYIRGLSVIDSSWLTE 684 >UniRef50_A2DDS9 Helicase, putative n=2 Tax=Trichomonas vaginalis RepID=A2DDS9_TRIVA Length = 740 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 225/697 (32%), Positives = 356/697 (51%), Gaps = 53/697 (7%) Query: 39 NPDAQQAIFQEMAKEIDQAA----GKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 P+ Q I +++A+ + + + LPV ++K +I+EA+R+ + Sbjct: 26 TPEEAQQITEKVAQLEESGEINPYTNKPYSKNYYKILETRMKLPVYERKDEIIEAVRNSK 85 Query: 95 VVIVAGETGSGKTTQLPKICMELGR-GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGC 153 V I+ G TGSGKTTQ+P+ +E I TQPRR+AA VA+R+A+E+ E G Sbjct: 86 VTIIEGSTGSGKTTQIPRFLLEANIIDPSQKIVCTQPRRVAAINVASRVADEMDIELGAE 145 Query: 154 IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213 +GY VRF + T + MTDG+L+ E D + +Y IIIDEAHER++N D ++G L Sbjct: 146 VGYCVRFDAKETSKTRLTYMTDGLLMREFVIDPNVTKYGIIIIDEAHERTINSDIIIGLL 205 Query: 214 KELLPRRPDLKIIITSATIDPERFSRHFNN---------APIIEVSGRTYPVEVRYRPIV 264 K L+ +R DLK+++ SAT++ +F R F+N P I V GR + V Y Sbjct: 206 KRLVNKRDDLKVVVMSATLEATKFQRFFDNITDDSEPCVTPHIVVPGRLHKVVKVY---- 261 Query: 265 EEADDTERDQL-QAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTE---- 319 + + L +A+ +D + GDIL+F++GE EI T D L T Sbjct: 262 --TEAAVPNYLNEAVSRTLDIHFNQPEGDILLFLTGEEEIESTCDRLRAEISGQTHSTGI 319 Query: 320 ---ILPLYARLSNSEQNRVFQS---HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 +LPLYA L EQ +VF+ + R+I+++TN+AETS+T+ G+ YVIDPG + + Sbjct: 320 SAYVLPLYASLPPQEQAKVFKPAKYPNTRKIIVSTNIAETSVTIDGVVYVIDPGMVKQNT 379 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTN 432 Y+ ++ L + PIS+A+A QR GR GR GIC RLY+++ F E T PEI R++ Sbjct: 380 YNPERRMSSLLVVPISKAAAVQRAGRAGRTRRGICYRLYTQETFEKELQEQTTPEIQRSD 439 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 LASV+L M A G+ DI FPF++ P+ + ++ + L LGA+ LT GR Sbjct: 440 LASVLLLMLAAGISDIMHFPFIDPPEYKLVKSSIEELYFLGAVDIQGN-----LTEKGRL 494 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ-DPRERPMDKQQASDEKHRRFHDK 551 +S +P++P+LA ++ ++ C E I + LS Q P RP+ + +D HR F Sbjct: 495 MSLIPIEPKLAAALISSKDFNCTVEMATIVAMLSEQGQPFMRPVKESAMADAAHRPFKCG 554 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 SD ++ + +N + + + C YLNY + QL ++++ GI Sbjct: 555 FSDHISLLRCFNEFAK-------DPSKNFCNQHYLNYRMLDRAYKSRQQLLSLLRKNGIE 607 Query: 612 VNSEPAEYRE------IHIALLTGLLSHIGMKDADKQEYTGARNAR-FSIFPGSGLFKKP 664 S + I ALL G+ + + ++Y+ + I P S + + Sbjct: 608 AVSIYDDKECQNPEKHIIHALLMGMFMQTCVYNPPTKQYSFMTGQKEADIHPSSSI-RSI 666 Query: 665 PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 P W++ E V T+ + R + I+ W+ Sbjct: 667 PTWLIYTEYVFTNSEFIRGCSEIEDSWIIQSCPEFFD 703 >UniRef50_C3YFD5 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YFD5_BRAFL Length = 666 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 210/691 (30%), Positives = 349/691 (50%), Gaps = 74/691 (10%) Query: 38 KNPDAQQAIFQEMAKEID-QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVV 96 K + +E + + V + A+ LPV + + IL + +Q V Sbjct: 10 KPGTEAPGVHEERQQVSEGSGEAVVHNQNASLSIQQQRQRLPVFKYRNQILYLVERYQTV 69 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLAARTVANRIAEELKTEPGGCIG 155 ++ GETG GK+TQ+P+ +E G G +G +IG TQPRR+A TVANR+AEE G +G Sbjct: 70 VIVGETGCGKSTQIPQYLLEAGWGAEGHVIGVTQPRRVACTTVANRVAEERGAVLGHEVG 129 Query: 156 YKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLK 214 Y +RF + T +K +TDG+L+ E+ D LL +Y +++DEAHER+L+ D ++G LK Sbjct: 130 YSIRFDNRFDPEATRIKFLTDGMLVREMMADPLLKKYSILMLDEAHERTLHTDIIIGLLK 189 Query: 215 ELLPRRPDLKIIITSATIDPERFSRHFNN----------APIIEVSGRTYPVEVRYRPIV 264 ++ +R DL+II++SAT+D + F FN A I+ + GR +PV V YR Sbjct: 190 KIQKKREDLRIIVSSATLDAKAFRDFFNKNVSDLESFDTAHILSIEGRAFPVNVYYR--- 246 Query: 265 EEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKLNLRH------ 317 + D +A D + ++ + E GDIL F++G+ E+ L + N + Sbjct: 247 ---ESPVPDYAKATVDTIVKIHEGEKAGDILAFLTGQEEVDSVVSDLIEYNRTNRRHVDG 303 Query: 318 ---TEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 ++LP+YA L EQ +VF+ S R+IV+ATN+AE S+T+ GI YV+D G ++ Sbjct: 304 RMKMKVLPMYAALPPGEQLKVFERVSQSTRKIVVATNIAEASITINGIVYVVDSGFVKLR 363 Query: 373 RYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTN 432 Y+ ++ V +E+DF T PE+ R+N Sbjct: 364 AYNPQSGV--------------------------------AEEDFHKLQTNTVPEMQRSN 391 Query: 433 LASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQ 492 A VILQ+ ALG+ +I F F+ +P + + G+ +L LGA+ D + + PLG Sbjct: 392 FAFVILQLKALGISNILRFNFLSSPPAQIVIRGLEVLYALGALDKDGELTR----PLGSN 447 Query: 493 LSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE 552 +++ P+ P A+M+LE+ K GC E + I + L +Q P +++ + H +F +E Sbjct: 448 MAEFPLSPMFAKMLLESGKFGCSEEILTIAAVLQVQSIFVHPSNRKIEALRAHHKFAVEE 507 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 D + +N++ L +N R C+ +L+Y + I QLR+++ + +P+ Sbjct: 508 GDLVTMLNVYEAF------LKNNKSSRWCQQHFLHYKGLVRATMIREQLRKLLVKFDVPM 561 Query: 613 NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPK-WVMVA 671 NS + I ++ G ++ T + I P S L+++ P WV+ Sbjct: 562 NSSEGDVDPICQCIVAGFFANAARFHPTGVYRTVRDDHELHIHPNSCLYREKPPGWVVFN 621 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKR 702 E++ TS+ + R IDP W+ +A H + Sbjct: 622 EVLHTSKQFMRDVTVIDPSWLYELAPHYYEY 652 >UniRef50_B3LCV7 ATP-dependent RNA helicase, putative n=3 Tax=Plasmodium RepID=B3LCV7_PLAKH Length = 1060 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 199/695 (28%), Positives = 343/695 (49%), Gaps = 85/695 (12%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRL 133 LP+ + DIL+AI++++++I+ GETGSGK+TQL + E + G I TQPRR+ Sbjct: 378 RKRLPIFSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLHECKYHLYGNIVCTQPRRI 437 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDT 193 A +ANR+A+E+ + G +GY +RF + S++T + MTDG+ L + + L Sbjct: 438 ACIAIANRVADEMNVKVGKEVGYVIRFQNKTSESTKIVYMTDGMFLRLLLYNPTLDDISV 497 Query: 194 IIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 +IIDEAHER+L+ D +L +K++ R D++III+SAT+D E+ S +FN API V GR Sbjct: 498 LIIDEAHERALHTDVILPIVKDICNFREDIRIIISSATLDAEKISTYFNCAPIFYVPGRK 557 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK 312 Y V++ Y + E + L AI + ++ + GDIL+F+ G+ EI L Sbjct: 558 YNVDIYY------TINNESNYLSAIVITILQIHVTQEKGDILVFLPGQFEIELVQQELEN 611 Query: 313 L------NLRHTEILPLYARLSNSEQNRVFQ----------------------------- 337 R+ ILP+Y+ L +Q R+F+ Sbjct: 612 KLIELAPRFRNMIILPIYSSLPVEQQARIFEDVADEDHGKGDAPDSGNPGAEQPDGASST 671 Query: 338 -------------------SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 378 R+I+L+TN+ ETS+T+ I YVID G + Y+ + Sbjct: 672 NTNIQTNELAPADQPKAIMRRGTRKIILSTNICETSITIDNIVYVIDSGLCKQKVYNPNS 731 Query: 379 KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVIL 438 ++ L P S+AS NQR GR GR +G C RL+++ F+ + + PEI R ++S+IL Sbjct: 732 GIESLVTLPCSKASVNQRTGRAGRKQDGKCFRLFTKKSFIDLNDNSVPEIQRCEVSSMIL 791 Query: 439 QMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPV 498 + +LG+ DI F F++ P I G+ LL LGA+ + LT GR++++ P Sbjct: 792 LLKSLGMDDIINFDFLDPPSPVVIIKGLELLYSLGALNDEGN-----LTKTGRKMAEFPT 846 Query: 499 DPRLARMVLEAQK-HGCVREAMIITSALS-IQDPRERPMDKQQASDEKHRRFH-DKESDF 555 D + ++M+L A + + CV E + IT+ L+ + K++ ++ + F + DF Sbjct: 847 DVKSSKMILAASEKYNCVEEILCITAMLTHANNIFYVQKGKEKEAENVKKMFTIEGGGDF 906 Query: 556 LAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615 L +N++ E +N C +L Y + + +DI TQL + +++ +P +S Sbjct: 907 LLLLNIYKQCEE------NNFSTSFCYDHFLQYHTMIKIKDIKTQLVSICEKIDLPSSSC 960 Query: 616 PAEYR----EIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK------PP 665 + + +++ ++ + + N SI+P S L KK Sbjct: 961 GIQNHDAICNLKKCIVSAFFTNAALPVNKNELKIIKLNQVVSIYPSSVLAKKNIMEEHKN 1020 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 ++ E+++ ++ + R + + + +A Sbjct: 1021 ACIIFYEVIKINKSYIRHNIPVTKDMLYEIASFYF 1055 >UniRef50_UPI0001792F5D PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 33 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792F5D Length = 653 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 207/655 (31%), Positives = 344/655 (52%), Gaps = 37/655 (5%) Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 +LPV+ +K + I+ ++ +I+ GETGSGKTTQ+P+I E + TQPRR Sbjct: 10 ERKSLPVTLQKDKLCSLIQKNETLIIIGETGSGKTTQIPQIVYENILRPDEDVVVTQPRR 69 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AA ++A R++ E+ TE G +GY+VRF D + T +K MTDG+LL ++ L Y Sbjct: 70 VAAISLAERVSYEVNTEIGDLVGYRVRFIDKTNHFTKIKFMTDGMLLRTAILEKSLSAYG 129 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRP----DLKIIITSATIDPERFSRHFNNAPIIE 248 +I+DEAHER++N D L G +K++ R LK+I+ SAT++ + F+ +F NA I+ Sbjct: 130 CVILDEAHERTVNTDLLFGIVKKVQRSRKHSSNPLKVIVMSATMNADLFADYFGNAQIVY 189 Query: 249 VSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHG--DILIFMSGEREIRDT 306 + GR + +++ + A D F + +L +E+ D L+F++G+ EI + Sbjct: 190 LQGRLHDIKIFH------AKKNVEDYFHDTFVTIFQLHKEAPERHDFLVFLTGQEEIENM 243 Query: 307 ADALNK-------LNLRHTEILPLYARLSNSEQNRVF---QSHS-GRRIVLATNVAETSL 355 A A+ N ++ LYA L +EQ +VF + + R+I+L+TN+AETS+ Sbjct: 244 ALAIEHINQDPSLRNYPVIKVRTLYASLPTNEQLKVFMSLEPNEFARKIILSTNIAETSV 303 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+ GIKYVID G ++ + T + L +E ISQA A QR GR GR S+G C R+YS+ Sbjct: 304 TLTGIKYVIDCGKVKVRCFHPETSMDALKVENISQAQAEQRAGRAGRESDGYCYRIYSKK 363 Query: 416 DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAI 475 + + PEILR NL +V+LQ+ A+ + D F F+ P I +L LGA Sbjct: 364 QYDEMTKDPVPEILRCNLGNVVLQILAMNM-DPHKFDFINKPSTDAIDQAYNMLGNLGA- 421 Query: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535 LT LG ++++ P+DPR ++++L + +GC+ + + I S LS + Sbjct: 422 -----TKNSILTELGHKMTKFPLDPRYSKIILSSVNYGCMEDIVNIVSILSTDSIFVSSL 476 Query: 536 D--KQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVRE 593 K++ +++ H +F SD + + + + +K S+ C ++LN + Sbjct: 477 SEKKKKQAEDAHTKFKSSVSDHIMLLKTFRSYRKVRKDSKSS----WCDDNFLNVRNLEY 532 Query: 594 WQDIYTQLRQVVKELGIPV-NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 QL + + L +P+ S + + LLTG ++ + DK+ T Sbjct: 533 ADRAREQLLDICRYLHLPIGQSCGDNFDPLRKCLLTGFFENLAYINQDKKYVTVNAKKEC 592 Query: 653 SIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707 I P S LF P V+ E++ETS+ + + ID EW+ + ++ +R + Sbjct: 593 KIHPTSTLFHSYPHCVLYTEIIETSQPYMKYITVIDKEWLVDIVPNVHQRHNYQV 647 >UniRef50_Q8IX18 Probable ATP-dependent RNA helicase DHX40 n=31 Tax=Deuterostomia RepID=DHX40_HUMAN Length = 779 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 215/729 (29%), Positives = 363/729 (49%), Gaps = 51/729 (6%) Query: 32 HGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIR 91 ++ + + + + +E + + E P+ ++++ I++A+R Sbjct: 10 RAPRRQEEGERSRDLQEERLSAV--CIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAVR 67 Query: 92 DHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPG 151 D+ +IV G TGSGKTTQLPK E G G+IG TQPR++AA +VA R+AEE+K G Sbjct: 68 DNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLG 127 Query: 152 GCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLG 211 +GY+VRF D S T +K MTDG LL I D L ++ II+DEAHER+L D L G Sbjct: 128 SKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFG 187 Query: 212 YLKELLP-----RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEE 266 LK+L R+ LK+++ SAT++ + S F N PI ++ GR YPV ++ ++ Sbjct: 188 LLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGP 247 Query: 267 ADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADAL-------------NK 312 D +QAI ++ E GDIL+F++G+ EI + + L Sbjct: 248 RDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQD 307 Query: 313 LNLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR 370 L ILP Y ++ +Q R+F R+ V++TN++ TSLT+ GI+YV+D G + Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367 Query: 371 ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEIL 429 ++ R + L + PIS++ A QR GR GR S G C R+YS+D + P+ PEI Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427 Query: 430 RTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPL 489 RT+L SV+L + L + D+ FP+++ P++R I + ++ L + AI + +T L Sbjct: 428 RTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAID-----RSGHVTRL 482 Query: 490 GRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP--MDKQQASDEKHRR 547 G + + P+ P L V++A C + I + LS+++ RP + Q+ ++++HR Sbjct: 483 GLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRE 542 Query: 548 FHDKES---DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 K DF ++ SS A C+ ++++ + + QLR++ Sbjct: 543 LAAKAGGFNDFATLAVIFEQ------CKSSGAPASWCQKHWIHWRCLFSAFRVEAQLREL 596 Query: 605 VKELGI-----PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTG-ARNARFSIFPGS 658 +++L E ++ + L G ++ + + T R + I P S Sbjct: 597 IRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSS 656 Query: 659 GLFKK--PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAV 716 L ++ +W++ E++ T++++ RI I EWV + L + + A+ V Sbjct: 657 ALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLS-SVARREV 715 Query: 717 M--ATEKVT 723 A + T Sbjct: 716 REDARRRWT 724 >UniRef50_C5DCP1 KLTH0B04664p n=2 Tax=Saccharomycetales RepID=C5DCP1_LACTC Length = 700 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 217/681 (31%), Positives = 348/681 (51%), Gaps = 36/681 (5%) Query: 39 NPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIV 98 + + + + ++A K L A + LPV + K I+ I +QV I+ Sbjct: 25 DKRSSADGSSDHEDGLTKSASKHDLAREAASLLKVRATLPVYKHKDSIMSHINKNQVTIL 84 Query: 99 AGETGSGKTTQLPKICME-LGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYK 157 GETGSGK+TQ+P+ ME I TQPRR+AA +A+R+A+E G +GY Sbjct: 85 IGETGSGKSTQIPQFLMENFPEKTDKRIAVTQPRRVAAINLASRVAQEYGCRLGERVGYS 144 Query: 158 VRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL 217 VRF + + T +K +TDG+LL EI D+ L Y +IIDEAHER++ D +LG+LKEL+ Sbjct: 145 VRFDNKSNARTKLKYLTDGMLLREIMLDKNLSDYSCVIIDEAHERTILTDLILGFLKELI 204 Query: 218 PR-RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ 276 R DLK+++ SAT+ E+FS F API+ V GR +PV+ Y D + Sbjct: 205 NSSRQDLKVVVMSATLQAEKFSEFFGRAPILFVEGRKFPVQRSYLKAQ------CDDVVD 258 Query: 277 AIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNK------LNLRHTEILPLYARLSN 329 AI +L+Q E GDIL FM G+ EI L+K ++ LPLYA L Sbjct: 259 AIIRCCVQLNQSEQMGDILCFMPGQEEIDKAVAILSKVGEHLGASVPRLVALPLYAALPP 318 Query: 330 SEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP 387 +EQ +VF R++V +TN+AETS+T+ G+K+V+D G ++ + ++ + L P Sbjct: 319 AEQAKVFAPVKGFKRKVVFSTNLAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVP 378 Query: 388 ISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGD 447 IS+ASA+QR GR GR S G C RLY E D+ P T+PEI R+ + S IL + +G+ D Sbjct: 379 ISKASASQRTGRAGRESAGKCFRLYREQDYQKLPNQTEPEIARSEVTSPILMLKKVGVKD 438 Query: 448 IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVL 507 I + ++E P K+ I ++ L +LGA+ + K+T G++++ LP+ P L+ ++L Sbjct: 439 IVNWSWLENPGKQAILMALQELFQLGALDD-----SGKITNKGQKMALLPLAPHLSSVLL 493 Query: 508 EAQKHGCVREAMIITSALSIQDPRERP-MDKQQASDEKH---RRFHDKESDFLAFVNLWN 563 +A + GC+ + I S LS+++ P +++ +EK K D + ++ Sbjct: 494 KAHEDGCLLPVIDIVSCLSVENLLINPSPEQRDEVNEKRFSIATRGSKYGDLVMLKEFYD 553 Query: 564 YLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV------NSEPA 617 + S+ C+ ++ + I QL ++ L S+ Sbjct: 554 AYMSLK---SAAEKDDWCKELCVSKRGFKNVVKIRAQLLSYMERLFKEKLSDNEDESDSF 610 Query: 618 EYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF-KKPPKWVMVAELVET 676 + + I L G + + D+ T S+ P S LF + ++ E V T Sbjct: 611 DIKAIVKCFLAGFAKNTAIGMPDRSFRTSTTGETISVHPSSMLFMDRSCPAILYTEYVFT 670 Query: 677 SRLWGRIAARIDPEWVEPVAQ 697 ++ + R +R++ W++ VA Sbjct: 671 TKGYARNVSRLELSWLQEVAG 691 >UniRef50_Q4UH89 ATP-dependent helicase, putative n=2 Tax=Theileria RepID=Q4UH89_THEAN Length = 1160 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 203/640 (31%), Positives = 326/640 (50%), Gaps = 78/640 (12%) Query: 120 GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL 179 K +IG TQPRR++ +A R+++E+ G +GY +RFSD SD T++K MTDG+LL Sbjct: 519 TEKKMIGITQPRRISCINIAKRVSDEMYCIIGNEVGYCIRFSDVTSDKTIIKYMTDGMLL 578 Query: 180 AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSR 239 EI D LL Y TI++DEAHER++ D L LKE +R D ++I+TSAT++ E+FS+ Sbjct: 579 REILHDPLLNNYITIMLDEAHERTIATDVLFSLLKETCMKRKDFRLIVTSATLESEKFSK 638 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMS 298 +F N+ I ++ GR++PVE+ + + E D L+ + + E GDIL+F++ Sbjct: 639 YFFNSKIFKIPGRSFPVEIFHS------KEQEFDYLETSLITILNIHLNEKPGDILLFLT 692 Query: 299 GEREIRDTADALNKL-------NLRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATN 349 GE +I L + N+ + P+Y+ L +Q ++F R+ +LATN Sbjct: 693 GEEDIETGIKILEERLNKLKNMNIPKLLLFPVYSALPQDQQQQIFQPAPPGTRKCILATN 752 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AE S+T+ GI YVIDPG +I Y+ +T ++ L I PISQA+A QR GR GR + G C Sbjct: 753 IAEASITIDGILYVIDPGLCKIKSYNPKTGMESLIITPISQANARQRAGRAGRTAPGKCF 812 Query: 410 RLYSEDDF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA----PDKRNIQD 464 RLY+E F PEI R NL +V++ + ++G+ D F F++ P + D Sbjct: 813 RLYTEKTFHEEMLPTPIPEIQRVNLTNVVIILKSMGINDFLHFDFMDKYALRPCNEMLID 872 Query: 465 GVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSA 524 + +L LGA+ + LT LGR+++Q P+DP L++++L + + C E + I S Sbjct: 873 ALDILYHLGALDDEGL-----LTHLGRKMAQFPIDPTLSKILLYSIEMDCYNEIITIISM 927 Query: 525 LSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-LCRT 583 LS+Q+ RP DK++ +D+ R+F E D L ++ ++N S+N F C Sbjct: 928 LSVQNIFYRPSDKREKADQSRRKFFQSEGDHLTYLYIYNQW-------SNNQFSNYYCYN 980 Query: 584 DYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY----REIHIALLTGLLSHIGMKDA 639 ++L Y + + QDI QL ++ + + I + +G H +D Sbjct: 981 NFLQYRALIKVQDIKKQLISIIDKYKFMKKKMKIDNLNKTERIQKCICSGFFHHSAKRDE 1040 Query: 640 DKQEYTGARNARFSIFPGSGLFK------------------------------------- 662 D T + I P S LF+ Sbjct: 1041 D-SYRTLLDEQKVYIHPSSSLFQRYCLPTEENLFPLTRSIFDIYFFLPYFSNYFYYLINN 1099 Query: 663 --KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 + P++V+ EL+ TS+ + R I +W+ +A + Sbjct: 1100 CIRNPEYVLYHELILTSKEYMRDLTIIKSKWLLELAPTMF 1139 Score = 82.5 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 34/57 (59%) Query: 64 REAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 + + + NLP+ + +++I+ I +Q++IV GETGSGKTTQ+P+ E Sbjct: 366 KRVYKNILEERKNLPIYKLREEIINEIIHNQILIVIGETGSGKTTQIPQYLYESKFH 422 >UniRef50_C1E1Z9 Predicted protein n=2 Tax=Micromonas RepID=C1E1Z9_9CHLO Length = 725 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 229/723 (31%), Positives = 344/723 (47%), Gaps = 69/723 (9%) Query: 33 GVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRD 92 G KK + A V R + LP+ + + IL + Sbjct: 7 GSKKPEASLPLSAEVDREGPGDSGGRLVVFNRNENLALQAQRERLPIFKTRDAILHLVET 66 Query: 93 HQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRLAARTVANRIAEELKTEPG 151 ++ G+TG GKTTQ+P+ +E G G + TQPRR+AA TVA+R+A+E+ G Sbjct: 67 RATTVLVGQTGCGKTTQVPQYLVEAGWTAGGRLVACTQPRRVAAMTVASRVADEMGVTLG 126 Query: 152 GCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLL 210 +GY VRF + + T V+ TDG+LL E+ +D LL +Y +++DEAHERSL D LL Sbjct: 127 AEVGYAVRFENVSTPGVTRVRFCTDGVLLRELMEDPLLSRYSVVMVDEAHERSLATDLLL 186 Query: 211 GYLKELLPRRPDLKIIITSATIDPERFSRHFN---------------NAP-----IIEVS 250 G LK++ RRPDL+III SATI E F+ F+ NAP I+ V Sbjct: 187 GLLKKVQRRRPDLRIIIASATIQAEEFAAFFDTRHLEPKPASEASSVNAPSREPGIVSVE 246 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIF-DAVDELSQESHGDILIFMSGEREIRDTADA 309 GR + V + Y + D ++A A+D E GD+L+F++GE EI Sbjct: 247 GRAHTVLIHYL------EKPVPDYVKAAVGAAIDVHRAEGPGDVLVFLTGEEEIEAAVSM 300 Query: 310 LNKLN-------------------LRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLAT 348 L + + PLYA LS ++Q F+ R+IV+A+ Sbjct: 301 LQEEAEDNSRRLLGGGAGTNPAGGPERFTVHPLYAGLSPAQQMEAFRPAPRYTRKIVVAS 360 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 NVAETS+T+ G+ YV+D + Y ++ L S+ASANQR GR GRV G Sbjct: 361 NVAETSVTIEGVVYVVDCCFVKQKAYDPTRGMESLLTAEASRASANQRAGRAGRVRPGKA 420 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RL +E F PE PE++R++LA+ +LQ+ ALG+ +I F ++ P N+ + L Sbjct: 421 YRLCTEKAFRDLPETAPPEMIRSDLAATVLQLKALGIDNIMNFEWLSPPPAANMIKALEL 480 Query: 469 LEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L L AI D +LT PLG L++LP++P+L + +L + + GCV E + +++ L + Sbjct: 481 LYALQAIDDDA-----RLTKPLGMHLAELPLEPQLGKALLVSGELGCVEEMLTVSAYLQV 535 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 Q P +Q+ DE RF E D + +N+ R + L+ Sbjct: 536 QTLWVSPRGRQKRLDECRDRFAVAEGDAVTALNIHTAWC-------GGRARSFADKNMLS 588 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQ----- 642 + + DI QL + V+ +G+ V+S + + A+ G ++ Sbjct: 589 HRALVRASDIRAQLARHVRRVGLVVSSAGKDSAPVRRAMTAGFFANAAALAPHGGGAEGS 648 Query: 643 -EYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 + A I PGS LF+ P V+ A V T R + R IDPEW+ +A H Sbjct: 649 AFRSVRGGATLFIHPGSVLFRARPAMVVYAAAVRTGREYMRDVTAIDPEWLSELAPHFYA 708 Query: 702 RTY 704 T Sbjct: 709 MTQ 711 >UniRef50_B8C4C7 Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana RepID=B8C4C7_THAPS Length = 702 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 217/703 (30%), Positives = 340/703 (48%), Gaps = 87/703 (12%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR------GIKGL 124 + LPV Q + ++ + + ++ VV+ ETGSGK+TQ+P E G Sbjct: 9 VKERCKLPVYQHRAELCKLVANNDVVLAVAETGSGKSTQIPAYVYESGLLTTSAKAYART 68 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVS----DNTMVKLMTDGILLA 180 I TQPRR+AA T+A R++EEL PG +G++VRF D + T + TDG+LL Sbjct: 69 ICVTQPRRVAAVTLAKRVSEELNCVPGTIVGHRVRFDDTTDVRGFNTTKIIYATDGMLLR 128 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR-PDLKIIITSATIDPERFSR 239 E D LL +Y +++DEAHERSL D L G ++ L P L++ + SAT+D F Sbjct: 129 EAMSDPLLQRYGLVVLDEAHERSLQTDVLFGMKQDALELGVPPLRVCVMSATLDIATFQA 188 Query: 240 HFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMS 298 F + +I++ GR +PV+ Y D + D + + ++ + GD+L+F+ Sbjct: 189 FFPGSAMIKIPGRQFPVQAVY------TDSIQEDYIDSALKTAIQIHKYGEEGDVLVFLP 242 Query: 299 GEREIRDTA---------------------DALNKLNLRHTEILPLYARLSNSEQNRVFQ 337 G+ EI D A D+ N + + I LYA L Q F+ Sbjct: 243 GQDEIEDLASLNNNNNTDTVQNIKGIGTSIDSGNSMIVNGVLICVLYAALPPDAQMIAFR 302 Query: 338 SHS---GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 R+I+L+TN+AETS+T+ GIKYV+D G + YS T ++ L + IS+A A Sbjct: 303 PKPEGCTRKIILSTNIAETSVTLDGIKYVVDCGKHKSREYSSSTGMESLKVSDISKAQAA 362 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GR GRVSEG+C+RLY E F S + T PEILR NLASV+LQ+ +G+ D +F F+ Sbjct: 363 QRMGRAGRVSEGVCLRLYPEIAFDSLADTTVPEILRVNLASVVLQLKGMGVHDPRSFSFL 422 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 P NI LL LGAI + LT G+++S+LP+DP A ++L++ K C Sbjct: 423 TPPSPENIVKSFELLTTLGAID-----KSMNLTMYGKEMSKLPLDPVFAHLLLQSPKFEC 477 Query: 515 VREAMIITSALSIQDPRERPMDK--------QQASDEKHRRFHDKESDFLAFVNLWNYLG 566 V E + + LS ++ RP + + HRRF E D +N++N Sbjct: 478 VSEVLTVVGMLSAENIFYRPGGRGDDSGGSLSAKATAAHRRFESYEGDLPTLMNVYNAWK 537 Query: 567 EQQKALSSNAFR----RLCRTDYLNYLRVREWQDIYTQLRQVVKE------LGIPVNS-E 615 ++ + NA + C+ ++++ + D+ QL ++ LG+ VNS Sbjct: 538 KEAIYVPGNAAKMLHGDWCKQNFISGRALVRAHDVRNQLSELCCRAVEKNGLGMDVNSTC 597 Query: 616 PAEYREIHIALLTGLLSHIGMKDA-------------------DKQEYTGARNARFSIFP 656 + + GL + + T + S+ P Sbjct: 598 VDDMTTFFKCVCAGLFLQVATRVPSLAQTSKSSAPKAGSIPSTRGHYKTRIGGSIVSVHP 657 Query: 657 GSGLFKKP--PKWVMVAELVETSRLWGRIAARIDPEWVEPVAQ 697 S +F + PK V+ +L+ T+R++ R +I EW++ + Sbjct: 658 MSSMFGRNPAPKCVVYTDLLFTTRMYIRGVTQIREEWLDDITP 700 >UniRef50_A2F2U1 Putative uncharacterized protein n=2 Tax=Trichomonas vaginalis RepID=A2F2U1_TRIVA Length = 706 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 215/670 (32%), Positives = 352/670 (52%), Gaps = 43/670 (6%) Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 E + + LPV + + +I+ AIRD+ +VI+ G+TGSGKTTQ+P+ +E Sbjct: 22 PYSETYKEILETRKKLPVYEHRMEIIAAIRDNPIVIIEGQTGSGKTTQIPQFVLEEALSP 81 Query: 122 KGL-IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 G I TQPRR+AA ++A R+A+E+ + G +GY VR+ D+VS+NT + MTDG+L+ Sbjct: 82 YGKKIVCTQPRRVAAISIATRVAQEMDVKLGDVVGYSVRYDDYVSENTKLVYMTDGLLMR 141 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 E D + +Y +IIDEAHER++N D ++G LK + RPDLKIII SAT+D +F + Sbjct: 142 EFISDPKISKYGVVIIDEAHERTVNTDIIIGILKLIGNVRPDLKIIIMSATLDAGKFVQF 201 Query: 241 FN----NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILI 295 + P +++ GR + VEV ++P + + + + A + E+ +ES GDILI Sbjct: 202 YTHGDITPPHLKIPGRQFNVEVFHQPQMVQNE------ITAAVNKCMEILEKESSGDILI 255 Query: 296 FMSGEREIRDTADALNKLNLR--------HTEILPLYARLSNSEQNRVFQS--HSGRRIV 345 FM+GE EI L R + PLYA L EQ +VF R++V Sbjct: 256 FMTGEDEIERACSILRDRISRTRVTGSVVDALVFPLYAALPPGEQAKVFNKLSAGTRKVV 315 Query: 346 LATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSE 405 ++TN+AETS+T+ G+ YVID G + S YS ++ + L IS+A+ANQRKGR GR + Sbjct: 316 VSTNIAETSVTIDGVVYVIDCGYVKQSGYSPSSRKRSLNRVYISKAAANQRKGRAGRTCD 375 Query: 406 GICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDG 465 G C R+Y+++ + E + PEI R++L SVIL M A + DI FPF++ P + + Sbjct: 376 GFCYRMYTQEQYEMMEEQSVPEIQRSDLCSVILLMLAAHISDIVHFPFLDHPHYKLLVGA 435 Query: 466 VRLLEELGAITTD----EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 + L L + + L+ G+ ++ LP++P+ A+ +L + ++G R+ + I Sbjct: 436 LEELYHLDTFLPHSPLPQNSLPEVLSTEGKLMAGLPIEPKYAKALLSSYEYGNSRDIIAI 495 Query: 522 TSALSIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRL 580 + LS Q P +K++ +D H+ F +++ D L + ++ Q N Sbjct: 496 VAILSEQGQIFLHPRNKKKEADIAHKPFINEKGDHLTLLQVYKEYIRQ-----GNKGTSW 550 Query: 581 CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE-----PAEYREIHIALLTGLLSHIG 635 +++ N+ + + QL +++K N + P + +ALL G ++ Sbjct: 551 AISNFFNHRSLENARKAAKQLERLLKNFNRYRNEDEDFNAPVNEEKFFLALLKGSFMNVA 610 Query: 636 MKDADKQE--YTGARNARFSIFPGS---GLFKKPPKWVMVAELVETSRLWGRIAARIDPE 690 ++ TG + I + LF+ KWV+ E V+T + R + I+P Sbjct: 611 KLGEHEKYQVVTGRGQQKAEIKFSALETSLFEDK-KWVIFDEFVQTDHDYLRTVSVINPN 669 Query: 691 WVEPVAQHLI 700 W+ A Sbjct: 670 WLCIAAPTFY 679 >UniRef50_P36009 Probable ATP-dependent RNA helicase DHR2 n=16 Tax=Saccharomycetales RepID=DHR2_YEAST Length = 735 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 219/731 (29%), Positives = 367/731 (50%), Gaps = 48/731 (6%) Query: 1 MTEQQKLTFTALQQRLDSLMLRDRLRFS-----RRLHGVKKVKNPDAQQAIFQEMAKEID 55 M + + R+ F+ +R + K + + + + + + Sbjct: 1 MAANSNSRVASNHTSKKQKVRRNIHPFTNNTRIKRASKIVKFNDSGEGDHVSDQRSNKEN 60 Query: 56 QAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICM 115 K L A+ + + LPV Q K++I+ I + V ++ GETGSGK+TQ+P+ + Sbjct: 61 VLTYKSLKSRASD-LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVL 119 Query: 116 ELGRG--IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLM 173 E G I TQPRR+AA +A R+A+E + G +GY VRF + + T +K + Sbjct: 120 EKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYL 179 Query: 174 TDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR-RPDLKIIITSATI 232 TDG+LL E+ + L +Y I+IDEAHER++ D +LG+LK L+ RPDL+II+ SAT+ Sbjct: 180 TDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATL 239 Query: 233 DPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHG 291 E+FS FNNAPI+ V GR + V+ Y D + A+ +++Q E G Sbjct: 240 QAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPT------DDIVDAVIRCCIQINQGEELG 293 Query: 292 DILIFMSGEREIRDTADALN--------KLNLRHTEILPLYARLSNSEQNRVFQSHS--G 341 DIL F+ G+ EI + + + PLYA L +Q+ VF Sbjct: 294 DILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFK 353 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 R++V +TN+AETS+T+ G+K+V+D G ++ + ++ + L PISQASA QR GR G Sbjct: 354 RKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAG 413 Query: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461 R SEG RLY E D++ P+ ++PEI R+++ S +L + G+ D+ + + E P K Sbjct: 414 RESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEA 473 Query: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521 I G++ L ELGA+ + K+T G+Q++ LP+ P L+ ++++A + GC+ + + I Sbjct: 474 IVMGLQELYELGALD-----TRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDI 528 Query: 522 TSALSIQDPRERP-MDKQQASDEKHRRFHDKE---SDFLAFVNLWN-YLGEQQKALSSNA 576 S LS+++ P +++ +E+ + D + L++ Y E K+ +++ Sbjct: 529 VSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASS 588 Query: 577 FRR-LCRTDYLNYLRVREWQDIYTQLRQVVKEL----------GIPVNSEPAEYREIHIA 625 R C+ ++ + + QLR K L + + +I Sbjct: 589 ERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKC 648 Query: 626 LLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLF-KKPPKWVMVAELVETSRLWGRIA 684 LTG + + + D+ T + SI P S LF K +M E V T++ + R Sbjct: 649 FLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYARNV 708 Query: 685 ARIDPEWVEPV 695 +RI+ W++ V Sbjct: 709 SRIELSWLQEV 719 >UniRef50_Q22YX8 Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22YX8_TETTH Length = 812 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 208/660 (31%), Positives = 347/660 (52%), Gaps = 45/660 (6%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGHTQPRRL 133 LP+ Q KQ+IL + ++ V+V ETGSGKTT++P+ +E G I G IG +QPRR+ Sbjct: 58 KELPIVQHKQEILYCVENYSCVVVIAETGSGKTTKIPQYLVEAGYAINGKKIGVSQPRRI 117 Query: 134 AARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYD 192 AA ++ANR+A+E+ G +GY VRF D+ + T +K MTDG+L+ +I D LL +Y Sbjct: 118 AAISIANRVAQEMGCIIGQEVGYSVRFDDNCDEELTQIKYMTDGMLINQILNDPLLSEYS 177 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN---------- 242 ++ID+ HERS+N D LLG LK++ + P LK++I+SATID E S F Sbjct: 178 VLMIDDIHERSINTDILLGLLKKIRRKNPQLKLVISSATIDAESISTFFQERVTDPKTNQ 237 Query: 243 -----NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILI 295 + I+ + GR +PV++ Y +T R+ + E+ + GDILI Sbjct: 238 VIANLTSQILYIEGRQFPVDIYYL------KETTRNYVVKAVQVTLEIIRAPDKKGDILI 291 Query: 296 FMSGEREIRDTA-----DALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG--RRIVLAT 348 F++G+ EI + + ++ +ILPLY+ L +Q VF+ R+I+++T Sbjct: 292 FLTGQEEIEAFIEIIQKNFIGDAERQNLKILPLYSGLPLEDQMEVFKPSESYVRKIIVST 351 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N+AE+S+T+ G+ YVID +I+ Y ++ + L + PIS+A+A QR GR GRV G C Sbjct: 352 NIAESSITISGVVYVIDTLFHKINYYDFKRGFENLLVVPISKAAAKQRAGRAGRVQRGEC 411 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RL ++D F+ + + PEILR +L++ ILQ+ LG+GD+ F ++ P++ + Sbjct: 412 YRLCTKDQFVQLYDNSTPEILRCDLSTFILQLKTLGVGDVTNFELLQQPNENAYAKALEQ 471 Query: 469 LEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQK--HGCVREAMIITSAL 525 L L I LT +G ++ ++ +L ++L + K GC ++ +++ S L Sbjct: 472 LFALKVID-----KYCNLTQEIGHKICDFNLETKLGVLLLNSFKDDFGCSQQMLVLCSML 526 Query: 526 SIQ-DPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTD 584 S+Q D + ++ KE D + +N++ + SS A + C Sbjct: 527 SLQGQVFYNGFDPATILKQ-KKKLGAKEGDHITLINIFLAFNHLK---SSQARQGFCSDH 582 Query: 585 YLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEY 644 LN + I+ QL + VK +G+ VN+ + I AL+T ++ D Sbjct: 583 KLNIKSLNMAVKIHDQLCKQVKRMGLKVNNSEDDIEGILRALVTAFFMNVAQLQPDGSYR 642 Query: 645 TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 + P S L P+WV+ +E+V +++ + R + +DP+W+ +A H + Sbjct: 643 NLRNKEILYLHPTSILNINFPQWVIYSEVVFSTKYYMREVSEVDPKWLLELASHYFEDQR 702 >UniRef50_UPI000050FFFD ATP-dependent helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FFFD Length = 1354 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 361/568 (63%), Positives = 441/568 (77%), Gaps = 24/568 (4%) Query: 71 ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQP 130 +TYP+NLPVS K +I EAIRD+QVVIVAGETGSGKTTQLPKIC+ELG G+ GLIGHTQP Sbjct: 3 VTYPENLPVSAAKDEIAEAIRDNQVVIVAGETGSGKTTQLPKICLELGLGVNGLIGHTQP 62 Query: 131 RRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ 190 RR+AARTVA RIA+EL + GG IGY+VRF+ V+D+T VK+MTDGILL+E+ +D+LL Sbjct: 63 RRIAARTVAERIADELGEDLGGTIGYQVRFTAQVADSTRVKVMTDGILLSELSRDKLLRD 122 Query: 191 YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVS 250 Y+ IIIDEAHERSLNIDFLLGYLKE++ +RP+LK+IITSATIDP+ F+ HF++APIIEV+ Sbjct: 123 YEVIIIDEAHERSLNIDFLLGYLKEVMGKRPELKVIITSATIDPQSFAAHFDDAPIIEVA 182 Query: 251 GRTYPVEVRYRPIVE--------------EADDTERDQLQAIFDAVDELSQESHGDILIF 296 GRTYPVEVRYRP+V+ + +Q + I A DELS E+ GDIL+F Sbjct: 183 GRTYPVEVRYRPLVDDDEDDDVDGPGESGSYETGPEEQTEGIIAAFDELSTEAPGDILVF 242 Query: 297 MSGEREIRDTADALNKLNLR-----HTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVA 351 +SGEREIRDTA+AL + + E++PL+ARLS EQ +VF+ HS R+VLATNVA Sbjct: 243 LSGEREIRDTAEALEAHLRKRPRLSNWEVVPLFARLSAGEQQKVFKPHSRPRLVLATNVA 302 Query: 352 ETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRL 411 ETSLTVPGIKYVID GTARISRYS RT+VQRLPIE ISQASANQRKGR GR S+GICIRL Sbjct: 303 ETSLTVPGIKYVIDVGTARISRYSNRTRVQRLPIERISQASANQRKGRSGRTSDGICIRL 362 Query: 412 YSEDDFLSRPEFTDPEILRTNLASVILQMTALGL----GDIAAFPFVEAPDKRNIQDGVR 467 YSE DF SRPEFTDPEILRTNLASVILQMT LG +I FPF+ P+ + ++DG Sbjct: 363 YSETDFDSRPEFTDPEILRTNLASVILQMTDLGFAASDKEILDFPFLTPPEAKAVRDGRT 422 Query: 468 LLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 +L ELGA+T+D +A +TP GRQLS LP+DPRLARMV+ + GC E II +ALSI Sbjct: 423 MLAELGALTSD-KAGTITVTPTGRQLSLLPIDPRLARMVIAGAEAGCGGEVTIIVAALSI 481 Query: 528 QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLN 587 QDPRERP + + A+DEKH RF SDFL+++NLWNYL +QQ AL+S+ FRR C+ ++LN Sbjct: 482 QDPRERPTEVRAAADEKHARFTHPGSDFLSYLNLWNYLDDQQSALTSSKFRRQCKAEFLN 541 Query: 588 YLRVREWQDIYTQLRQVVKELGIPVNSE 615 ++R+REWQD+ QLR + GI VN Sbjct: 542 FVRIREWQDLVGQLRSLSGSAGIRVNKS 569 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 247/711 (34%), Positives = 365/711 (51%), Gaps = 36/711 (5%) Query: 616 PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVE 675 IH ALLTGLLS IG + ++Y GAR RF+IFPGSGLFKK P +VM AELVE Sbjct: 652 DPHAAAIHRALLTGLLSMIGSRSERNKDYQGARGTRFAIFPGSGLFKKKPDFVMAAELVE 711 Query: 676 TSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKV 735 TSRLW R + I+P+WV A L+ R YS+PHW + G M EK+++YG+ +V+ R+V Sbjct: 712 TSRLWARTVSAIEPDWVVEAAGDLVTRQYSDPHWSKKAGGSMVYEKISLYGVTLVSDRRV 771 Query: 736 NYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETL 795 Y D R++FIR L+EGDW R F N + E E L ++R +L D+ L Sbjct: 772 GYGTFDREAARDMFIRKGLIEGDWHERFGFLETNAAVIDEAEALASRTRNSRVLDQDDAL 831 Query: 796 FEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKIS---KLDYPNFW 852 FEFYD+RI + SA F +WWKK R +L+ S+L+ + +E+++ D+P W Sbjct: 832 FEFYDERIPATITSAADFRAWWKKQKRRDSHILDLSTSILLSDDSEELTASVADDFPMEW 891 Query: 853 H-QGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLP 911 +L Y FEPG+ DGVTV +P + V+ F WQ+PGLR ELV A I+SLP Sbjct: 892 ELVDGSTAKLRYSFEPGSTEDGVTVELPAAAVPLVDSDEFSWQVPGLREELVAAYIRSLP 951 Query: 912 KPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTG---------VTVDREDWHW 962 K RR FVPAP+ A L + P L + L +L G +TV ED+ Sbjct: 952 KNKRRYFVPAPDVARDILPVLTPYRGALPEVLAAQLSERAGGGGLNDLVPITVTAEDFDL 1011 Query: 963 DQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSF 1022 ++P HL+I FRV+D + G L+ L K +V++ A Q+G+ WSF Sbjct: 1012 GRIPPHLRIRFRVID-GTTTVGIGEDLKKLTKTAKPQVRKA-RAQQVSFTAQTGMTSWSF 1069 Query: 1023 GQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPI 1082 G L E + G A P LVD SV + FD + + + GL LL L + Sbjct: 1070 GALTNPDEAEVG-----AVPGLVDRGTSVDLVAFDTAAQARLSSREGLITLLSLRTNEAL 1124 Query: 1083 KYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGP-----VWTEEGFAAL 1137 KYL + L KL L + E++ + G+ +++A G V F +L Sbjct: 1125 KYLRDGLTTDEKLVLAGHQKTS-DEMLHALVRAGIRSVVEAELGAAETGWVADAVEFGSL 1183 Query: 1138 HEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGF 1197 KV A L D + + + L + ++K + + + L+D++A G V Sbjct: 1184 ETKVHAALTDMCASLLPHLMKALRSATELDKLVSKASSLAILSNLADVQAWRGSRVTGAS 1243 Query: 1198 VTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWI-NKLPPARR 1256 V + + + R++QA R++ + P RD+ M +V + + + N+ P + Sbjct: 1244 VAAMSGQMVRELPRWVQAEVVRIDGMQNSPMRDKQLMDRVSGSTDSVMKKVGNRFPELSK 1303 Query: 1257 ED---------EDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 D + +++ M+EELRVS +A LGT +P+S+KRI +A+ Q+ Sbjct: 1304 ADWSKVVVSVPSEWRDVIIMLEELRVSLYANSLGTAHPVSEKRIAKALAQL 1354 >UniRef50_O01598 Putative uncharacterized protein T05E8.3 n=1 Tax=Caenorhabditis elegans RepID=O01598_CAEEL Length = 856 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 217/712 (30%), Positives = 352/712 (49%), Gaps = 48/712 (6%) Query: 39 NPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIV 98 P + ++ + EA + + LP+ +Q ++ + + +IV Sbjct: 124 TPSNSKNATPMSTRKHSSSQQSPPHFEANYEKFS-RPQLPIDAVEQQLMYELASQETLIV 182 Query: 99 AGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKV 158 GETGSGK+TQ+P++C+ G G I TQPRR+AA ++A+R+A E+ T GG +GY V Sbjct: 183 IGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRVAAISLASRVATEMGTNIGGIVGYHV 242 Query: 159 RFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP 218 RF + T ++ MTDGI+L + LL +Y +IIDEAHERSL+ D L+ L++ Sbjct: 243 RFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQD 302 Query: 219 RR----PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQ 274 +R L++II SAT+ E+F +FNNA ++ V+GRT+P+EV + + D Sbjct: 303 QRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDY 362 Query: 275 LQAIFDAVD-ELSQESHG-DILIFMSGEREIRDTADALNKLN---LRHTEIL---PLYAR 326 + V E G DIL+F++G EI A L +LN ++L PLYA Sbjct: 363 VYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAA 422 Query: 327 LSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 384 L +Q F+ R+++++TN+AETS+T+PGI+ VID G + R+ ++ L Sbjct: 423 LRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLK 482 Query: 385 IEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALG 444 + +S+A A QR GR GR + G C RLYS +DF PEILR NL++ L++ LG Sbjct: 483 VHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFLELMKLG 542 Query: 445 LGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT-DEQASAYKLTPLGRQLSQLPVDPRLA 503 + + ++ P+ NI + L LGAI + S + LT +G P+ P A Sbjct: 543 MKNPHRLKLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHA 602 Query: 504 RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS--DEKHRRFHDKESDFLAFVNL 561 R++ +AQK GC+ EA+ I +A+ D + + D RRF +E D + + L Sbjct: 603 RILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLLKL 662 Query: 562 --------------------WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 + + + + R+ C + +N ++ I QL Sbjct: 663 VLVTNQFFDQLNKKTESDARYGKANKSLEREYNQTIRKFCNDNMINEQHLKTASMIEEQL 722 Query: 602 RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN--ARFSIFPGSG 659 +Q+ E + ++ A++ ++ AL G+ + D + Y N I P S Sbjct: 723 KQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCEYDRQEDRYRLMINPAITLKIHPSSC 782 Query: 660 LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV--------AQHLIKRT 703 L + P +++ +EL++T+ L+ ID +WV P+ A HL + T Sbjct: 783 LSRSKPAYIVFSELMKTNDLFALQVTLIDGDWVRPLISDHKKMRANHLAETT 834 >UniRef50_Q8SQW7 Possible PRE-mRNA SPLICING FACTOR (ATP-DEPENDENT RNA HELICASE) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQW7_ENCCU Length = 664 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 191/628 (30%), Positives = 324/628 (51%), Gaps = 32/628 (5%) Query: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138 V K +I + QV+++ G+TG GKTT++PK + G I +QPRR+AA ++ Sbjct: 59 VEDKMDEIFAKLEKSQVLLIQGDTGCGKTTKIPKYLLR----KYGKIVCSQPRRIAAVSI 114 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 A ++A ++K + G +GY +RF D S T +K +TDG+LL EI+ D+ L +YD +IIDE Sbjct: 115 AKKVAVDMKGKIGEDVGYSIRFDDMSSGRTRLKYVTDGVLLREIKNDKHLKKYDVVIIDE 174 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258 AHERS+NID LLGYLK +L R DL+++I SAT++ E+F+ F +E+ R +P+E+ Sbjct: 175 AHERSVNIDILLGYLKSILSERKDLRVVIMSATLNSEKFASFF-RCQTVEIRHRMFPLEI 233 Query: 259 RYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKLNLRH 317 + D + V ++ + E GDIL+F++G EI + L ++ Sbjct: 234 FFLK-----KSDVADYVDEAMKTVVQIHRGEESGDILVFLTGRDEINSGREILMEVLGND 288 Query: 318 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 E+ +Y+ LS EQ VF+ R+IVLATN+AETS+T+ G++YV+D G A+ RYS Sbjct: 289 AEVCCIYSTLSPEEQEAVFRKTKKRKIVLATNIAETSITIEGVRYVVDSGRAKQMRYSAS 348 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 + L + IS+A A QR GR GR G R+YS++++ + T PEI NL ++ Sbjct: 349 FGMDILEVVWISKAQAKQRAGRAGRTQAGKVFRMYSKEEYQKMDDNTTPEIFCCNLGKIV 408 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 L++ ++G+ DI F ++ PD N++ + +L L AI K+T +G + S +P Sbjct: 409 LELKSIGVDDIVNFNLIDKPDASNVKKALEMLYYLRAI-----GGDGKITSIGVKASTIP 463 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE---RPMDKQQASDEKHRRFHDKESD 554 +DP LA ++ + + GC+ + II + LS+ + R +A DK D Sbjct: 464 LDPELAVSLIVSSELGCLEDVSIIAAMLSVGNVWLDVPRYSQSYKAFLGARAAHFDKRGD 523 Query: 555 FLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS 614 + ++ + +S +R +LN + + I QL + + + Sbjct: 524 HFLLLKIYRRWEKTGFKISH--LKRW----FLNVKTMLQTVKIKKQLCSMFR------SP 571 Query: 615 EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELV 674 ++ I +L G ++ + + + I S + ++ K+++ L Sbjct: 572 CKSDESGILPSLCAGYFMNVAKL-VGESYVSIFNDTPCFIHYTSCMSRQNAKYILYHTLC 630 Query: 675 ETSRLWGRIAARIDPEWVEPVAQHLIKR 702 T + + R + E + A H+ + Sbjct: 631 RTGKEYARYCVGVTLEDLLKGANHMFAK 658 >UniRef50_A8XFV1 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8XFV1_CAEBR Length = 859 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 213/698 (30%), Positives = 352/698 (50%), Gaps = 45/698 (6%) Query: 43 QQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET 102 + + + + K RE A E LP+ +Q ++ + + +IV GET Sbjct: 124 SKKPNAAIPSKNAEPKAKNSPREDATYEKFIRPQLPIDVVEQQLMHELASQETLIVIGET 183 Query: 103 GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSD 162 GSGK+TQ+P++C+ G KGLI T+PRR+AA ++A+R+A E+ T+ GG +GY VRF + Sbjct: 184 GSGKSTQVPQLCVRAGIAEKGLIAVTEPRRVAAVSLASRVAVEMGTDLGGTVGYHVRFEN 243 Query: 163 HVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR-- 220 S T ++ MTDGI+L + LL +Y T+IIDEAHERSL+ D L+ L++ +R Sbjct: 244 VTSHRTKIEYMTDGIVLRKALVSPLLDKYSTVIIDEAHERSLHSDVLMCILRKCQAQRRS 303 Query: 221 --PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAI 278 L++II SAT+ ++F +F+NA ++ VSGRT+P+E+ + + D + Sbjct: 304 TDNPLRLIIMSATLQADKFQAYFDNAKVVLVSGRTFPIEIHHVNPKINKSFSATDYVYNT 363 Query: 279 FDAVDELS-QESHG-DILIFMSGEREIRDTADALNK------LNLRHTEILPLYARLSNS 330 V + E G DIL+F++G EI A L + +PLYA L Sbjct: 364 VICVKHVHLTEPKGHDILVFLTGSEEIEAVAHQLAELNGSLPREADFILPVPLYAALRPE 423 Query: 331 EQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPI 388 +Q FQ R+++++TN+AETS+T+PGI+ VID G + R+ ++ L + + Sbjct: 424 KQREAFQKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEASNRIDVLKVHNV 483 Query: 389 SQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDI 448 S+A A QR GR GR + G C RLY+ +DF PEILR NL++ L++ LG+ + Sbjct: 484 SKAQAKQRAGRAGRDAPGKCYRLYTREDFQKFDAENMPEILRCNLSATFLELMKLGMKNP 543 Query: 449 AAFPFVEAPDKRNIQDGVRLLEELGAITT-DEQASAYKLTPLGRQLSQLPVDPRLA---- 503 +++ P+ +NI + L LGAI + S + LT +G P+ P A Sbjct: 544 HRLGWIDPPESQNIDAALLELTSLGAIRPINSDRSKFVLTEMGDVFCMYPLSPEHARKLK 603 Query: 504 --RMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS--DEKHRRFHDKESDFLAFV 559 R++ +AQK GC+ EA+ I +A+ D + + + R+F +E D + + Sbjct: 604 VFRILFQAQKEGCIMEAIKIVAAMQTDALFSGGSDSKSDAEVERVRRKFETREGDHITLL 663 Query: 560 NL--------------------WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 + +N + + + A R+ C + +N ++ I Sbjct: 664 KIVLTTNDFFDQLNAKTEADARYNKSNKSLEREYNEAIRKFCNDNMINEQHLKTGSMIED 723 Query: 600 QLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN--ARFSIFPG 657 QL+Q+ E + ++ A+ +I A+ GL + D + Y N I P Sbjct: 724 QLKQIAIEQNVKFSTCGADLSKIRKAIAVGLFLNSCEYDRQEDRYRLMINPAITVKIHPS 783 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 S L + P +++ +EL++T+ L+ ID +WV P+ Sbjct: 784 SALSRSKPAYIVFSELMKTNDLYALQVTLIDADWVRPL 821 >UniRef50_D0A429 Pre-mRNA splicing factor ATP-dependent RNA helicase, putative n=2 Tax=Trypanosoma brucei RepID=D0A429_TRYBG Length = 754 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 212/685 (30%), Positives = 340/685 (49%), Gaps = 82/685 (11%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL--GRGIKGLIGHTQPRRLA 134 LPV++ + I+ IR H V++ GETGSGKTTQ+P+ + +G G++G TQPRR+A Sbjct: 76 LPVTEARAAIVRMIRRHNAVVIVGETGSGKTTQIPQYVWDDIVSKGDGGIVGCTQPRRVA 135 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A ++A +A++ + GG + Y VRF D + NT +K MTDGILL EIQ D L Y + Sbjct: 136 AVSIARHVAQQRGGKVGGEVAYAVRFDDTCTKNTKIKFMTDGILLREIQTDPDLTHYRCL 195 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEVSGRT 253 I+DEAHER+L+ D L G LK++ RR + L I+I SAT++ E FS+ + +AP+ + GRT Sbjct: 196 ILDEAHERTLHGDVLFGLLKDIARRRKNTLSIVIMSATLNEEHFSKFWWDAPVGVIHGRT 255 Query: 254 YPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNK 312 +PV + + + + D ++A A+ ++ +E GD+L F++G EI D L + Sbjct: 256 FPVTIYH------TVEPQADYVEAAVSALLQIHQREEPGDVLCFLTGREEIEDAKRMLEQ 309 Query: 313 LN------LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVI 364 + +LPLY+ + +Q VF R+I++ATN+AETS+TV GIKYV+ Sbjct: 310 RMKLLPNDIGDFVVLPLYSAMPYEQQLVVFDPAPPGKRKIIIATNIAETSITVEGIKYVV 369 Query: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFT 424 D G + Y+ +T ++ L +S+A A QR GR GRV+ G C RLY+ F S E T Sbjct: 370 DSGVVKAKHYNSKTGMEVLAEVDVSRAQATQRAGRAGRVAAGKCFRLYTAQAFESLHENT 429 Query: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 PEI R +L SV+LQM +L + IA F F++AP+ + L L A+ ++ Sbjct: 430 VPEIQRCSLISVVLQMKSLNIDRIADFEFMDAPNPHALTKAEETLMLLNALDSEG----- 484 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 +TPLG++L+ P++P A ++L + G REA+I + S ++ D ++ +D Sbjct: 485 CVTPLGKRLTDFPIEPAAAMVLLAGKALGVEREAVIAIAMTSTENLFVTSRDIKERADRC 544 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 F D V+++ K + C T+ ++Y ++ + QD+ TQL + Sbjct: 545 KGAFAKSAGDHATLVSIYQAFKHSPKD----QRKLWCETNAISYRQMLKVQDVITQLMAI 600 Query: 605 VKE--------------------LGIPVNSEPA--------------------------- 617 + E S Sbjct: 601 LAEGDDEELLATLVPKSVRQALSHKATDESCAVVSGSNDDNTVTNGYDHQWEPGANGRSS 660 Query: 618 -----EYREIHIALLTGLLSHIGMKDAD-KQEYTGARNARFSIFPGSGLF--KKPPKWVM 669 ++ + AL G ++ +A T I P S LF ++ P V+ Sbjct: 661 GLKFRDFELLRRALCCGYFLNVAFYNAKIGNFQTVVGQQVVHIHPSSVLFTLRRKPALVL 720 Query: 670 VAELVETSRLWGRIAARIDPEWVEP 694 +V T+R + + + + W+ Sbjct: 721 FNSVVRTTRRYMQNVSVVQEAWLRE 745 >UniRef50_B6K8E7 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K8E7_SCHJY Length = 1082 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 207/701 (29%), Positives = 327/701 (46%), Gaps = 102/701 (14%) Query: 5 QKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLR 64 ++L+ L M R R + V+ + A+ + + A + Sbjct: 442 EELSTQDLALSWQDSMARPEDR--KFAQDVQTAAAKEVASALPSW--RNDSKPAFVSYGK 497 Query: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-KG 123 ++LPV + +Q LEA+ +QV+++ GETGSGKTTQ+ + E G Sbjct: 498 RTMLSINEQRESLPVYKLRQQFLEAVASNQVLVLLGETGSGKTTQITQYLAEEGYTRGSK 557 Query: 124 LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 I TQPRR+AA +VA R+AEE+ G +GY +RF D S+ T +K MTDG+L E Sbjct: 558 KIACTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDRTSNLTRIKYMTDGMLQRECL 617 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN 243 D LL QY +I+DEAHER++ D L G LK + +R DLK+I+TSAT+D ERFS +F+ Sbjct: 618 VDPLLHQYSVVILDEAHERTVATDVLFGLLKSAVLKRKDLKLIVTSATLDAERFSSYFHK 677 Query: 244 APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGERE 302 PI + GR+YPVE+ Y + E D L A V ++ E GDIL+F++G+ E Sbjct: 678 CPIFTIPGRSYPVEILY------TKEPEPDYLDAALLTVLQIHLTEGPGDILVFLTGQEE 731 Query: 303 IRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKY 362 I + + L++ Q R +GR T PG Y Sbjct: 732 IDTSCEILHER-----------------AQARQRSGRAGR-------------TGPGKCY 761 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRP 421 RLY+E F Sbjct: 762 -----------------------------------------------RLYTESAFRNEML 774 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 PEI R NL+ IL + A+G+ D+ F F++ P + + + L L A+ D Sbjct: 775 VSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALENLYALSALDDDGL- 833 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 LTPLGR+++ P++P+L++++L++ ++GC E + I + LS+ + RP +KQQ + Sbjct: 834 ----LTPLGRKMADFPMEPQLSKVLLKSVEYGCSDEILSIIAMLSVPNIWSRPREKQQEA 889 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQL 601 D +F + ESD L +N++ S+ C +Y+ +R +D+ QL Sbjct: 890 DRHRAQFSNPESDHLTLLNVYFAW------KSNRCSDSWCYDNYIQARGMRRAEDVRNQL 943 Query: 602 RQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKD-ADKQEYTGARNARFSIFPGSGL 660 +++ P+ S I AL +G +++ +D + T NA + P L Sbjct: 944 ARLMDRHKHPIISCGRNRESILKALCSGHFTNVAKRDSREGCYKTLVENAPVFMHPSGVL 1003 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 F KP +WV+ EL++TS+ + + I+P W+ VA + K Sbjct: 1004 FGKPAEWVIYHELIQTSKEYMHTVSTINPRWLTEVAPNFYK 1044 >UniRef50_Q2GVT0 Putative uncharacterized protein n=2 Tax=Sordariomyceta RepID=Q2GVT0_CHAGB Length = 626 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 211/667 (31%), Positives = 336/667 (50%), Gaps = 78/667 (11%) Query: 66 AARPEITYPDNL-PVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL 124 A P + P L P+++ ++ +L I V IV G+TGSGK+TQ+P+ G G Sbjct: 9 AFIPALHKPAELLPIAKHRKSLLYLIETSPVTIVVGQTGSGKSTQIPQFLERAGWCADGK 68 Query: 125 IG-HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ 183 I TQPRR+AA TVA R+AEE + G +GY +RF D S+ T +K +TDG+L+ E Sbjct: 69 IIGITQPRRVAATTVAIRVAEEFGCDVGKEVGYSIRFEDATSETTRIKFLTDGLLIREAL 128 Query: 184 QDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHF-- 241 D LL +Y I++DEAHERS++ D LLG LK++ +RPDL+III+SAT+ E F F Sbjct: 129 VDPLLSRYSVIMVDEAHERSISSDILLGLLKKIRKKRPDLRIIISSATLQAEEFRNFFSE 188 Query: 242 ------------NNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQ-E 288 +NA I+ + GRTYP+++ Y D D L V ++ E Sbjct: 189 PKEETPNGKENGDNASIVSLEGRTYPIDILYL------DSPAEDYLDKAVSTVIDIHTNE 242 Query: 289 SHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLAT 348 GDILI ++ + S + +S + R+++ +T Sbjct: 243 PKGDILI-----------------------------SKCTCSRK----RSENFRKVIFST 269 Query: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408 N++E S+T+ GI YV+D G ++ Y +T ++ L P+S+ASA QR GR GR G C Sbjct: 270 NISEASVTIDGIVYVVDSGFVKLRAYDPKTGIESLTATPLSKASAAQRAGRAGRTKPGKC 329 Query: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RLY+E+ + S PE PEI R+NLA +LQ+ ALG+ ++ F F+ P + G+ L Sbjct: 330 FRLYTEEAYQSLPEANIPEIQRSNLAPFVLQLKALGIDNVLRFDFLAPPPAELMVRGLEL 389 Query: 469 LEELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI 527 L LGA+ KLT PLG ++++L V+P +A+ +L AQ GC+ E + I + S+ Sbjct: 390 LYSLGALDD-----YAKLTRPLGLRMAELAVEPMMAKTLLSAQSFGCLSEILTIAAMTSL 444 Query: 528 -QDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL 586 + + +++ ++ R+F +E D L +N++ + + S R C + L Sbjct: 445 GGNIWIQHEGEKKKTESAKRKFAAEEGDQLTLLNVYQAFVTKGRKES-----RFCHENLL 499 Query: 587 NYLRVREWQDIYTQLRQVVKELG---------IPVNSEPAEYREIHIALLTGLLSHIGMK 637 N+ + I QL++ ++ G ++ + +I L G +H Sbjct: 500 NFKLMARAVSIRAQLKRYLERFGLNVDESLAAHSTSTASNKAEQIQRCLTAGYFAHAARM 559 Query: 638 DADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET-SRLWGRIAARIDPEWVEPVA 696 D + P S +F + +WV+ E++ET ++ + R RI+ W+ A Sbjct: 560 QPDGTFRNVSGTTVLHAHPSSIMFNRKAEWVIFHEVMETGNKTFIRDITRIEKSWLLEYA 619 Query: 697 QHLIKRT 703 K T Sbjct: 620 PEFYKTT 626 >UniRef50_C4Y8X8 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y8X8_CLAL4 Length = 881 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 213/705 (30%), Positives = 362/705 (51%), Gaps = 71/705 (10%) Query: 53 EIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPK 112 +I+ K+ + A+ + +NLP+ Q K I++ + ++QV ++ GETGSGK+TQ+P+ Sbjct: 182 KINSGVSKLERSQKAKELLKVRENLPIYQHKDKIIDYVTNNQVTVIIGETGSGKSTQIPQ 241 Query: 113 ICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKL 172 M L K + TQPRR+AA ++A R++EE G +GY+VRFS+ S T + Sbjct: 242 FLMPLN---KKRVAVTQPRRVAAASLAARVSEEYGCVLGEEVGYQVRFSNITSSKTQLNY 298 Query: 173 MTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSA 230 +TDG+L+ E+ D L +Y TIIIDEAHER++ D +LG+LK+L+ +R DLKII+ SA Sbjct: 299 LTDGMLIRELMLDPKLSKYSTIIIDEAHERTVLTDLILGFLKQLISSRQRTDLKIIVMSA 358 Query: 231 TIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQES 289 T++ E FS+ F+ API+ V G+ YPV Y ++ D + + A+ ++ E Sbjct: 359 TLNAELFSKFFDYAPILFVEGKMYPVSRHYLS------ESSEDVVDTMVKAIVQVNMSEQ 412 Query: 290 HGDILIFMSGEREIRDTADALNKLNLR-----HTEI-LPLYARLSNSEQNRVFQSHS--G 341 GDIL F+ G+ EI + L+ L + + LPLYA LS +Q+++F+ S Sbjct: 413 EGDILCFLPGQEEIDNCVTILSTLAPQLPKEAPLIVPLPLYAALSPGQQSKIFEKLSGRK 472 Query: 342 RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCG 401 R++++ATN+AETS+TV G+K+VID G ++ + ++ + L PISQASA QR GR G Sbjct: 473 RKVIIATNIAETSITVSGVKFVIDSGLRKVKVWKHQLGLSTLLTTPISQASAKQRAGRAG 532 Query: 402 RVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKR 460 R S G RL+ E+ F P+ + EI+R ++ IL + +G+ D+ + ++E P + Sbjct: 533 RESAGKVFRLFPENVFHSKLPKQQESEIMRNDVILPILTLKKMGVDDLLNWTWLEHPGQE 592 Query: 461 NIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMI 520 I + L LGA+ + K+TPLG +++ LP+ P L+ +++ A +G +++ + Sbjct: 593 AIISALNTLYSLGALDD-----SGKVTPLGYKMAILPLPPALSAVLIGASDYGVLQDVID 647 Query: 521 ITSALSIQDPRER---PMDKQQASDEKHRR---FHDKESDFLAFVNLWNYLGEQQKALSS 574 I S LS+ + + + + K R+ + D +A + Y + + + Sbjct: 648 IVSCLSVDNLVLNIGGNGELRDEINYKRRQYCPLGNTSGDLIALKEYFTYFEKLHREKNI 707 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVV-------------------KELGIPVNSE 615 + + C+ + +Y + QL + K++ + + Sbjct: 708 SELKMWCKDLFFSYRGFINVLKVRRQLTDYMITTIKSDDSLNQNEKDAQLKKMKAQLALQ 767 Query: 616 PAEYRE-------------------IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFP 656 + I + L G + + D+ T A SI P Sbjct: 768 SSNTESSGEEEENFLDLKQSLDIPSILKSFLKGYALNTAIGMPDRSFRTCATGQLISIHP 827 Query: 657 GSGLFKKPP-KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 S LF K +M E V T++ +GR + I+ W++ VA H++ Sbjct: 828 SSNLFGKSNLDAIMYIEYVYTAKSYGRNCSSIELSWLQEVAPHIL 872 >UniRef50_B5RU49 DEHA2E21340p n=4 Tax=Saccharomycetales RepID=B5RU49_DEBHA Length = 841 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 220/755 (29%), Positives = 360/755 (47%), Gaps = 78/755 (10%) Query: 10 TALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKE--------IDQAAGKV 61 L + +++ + + +K K E + Sbjct: 92 ANLSDETEEKIIKPKKSIEQSTTDPRKAKKMKKVVNYEDSEEDEDEGNNSYYKSKDLSNS 151 Query: 62 LLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI 121 L + A LP+ Q K +IL + +QV ++ GETGSGK+TQ+P+ M Sbjct: 152 QLSKKASDLYEVRQKLPIFQHKDEILRYVNKNQVTVIIGETGSGKSTQIPQFLM---PTN 208 Query: 122 KGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHV-SDNTMVKLMTDGILLA 180 + I TQPRR+AA ++A R++EE G +GY+VRFS+ T +K +TDG+LL Sbjct: 209 RKQIAVTQPRRVAAASLAARVSEEYGCRLGQEVGYQVRFSNVTHPHKTKLKYLTDGMLLR 268 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL--PRRPDLKIIITSATIDPERFS 238 EI D L +Y TIIIDEAHER++ D ++G+LKEL+ +R DLKIII SAT++ E FS Sbjct: 269 EIMLDGNLNKYSTIIIDEAHERTILTDLIMGFLKELIVSKKRADLKIIIMSATLNAELFS 328 Query: 239 RHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFM 297 + F+ API+ V G+ YPV Y D+ D + ++ ++ E GDIL F+ Sbjct: 329 KFFDQAPILFVEGKMYPVSKHYL------ADSTEDIADTMVRSIVQVNMSEQEGDILCFL 382 Query: 298 SGEREIRDTADALNK------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATN 349 G+ EI + L + LPLYA LS ++Q+++F+ R+++LATN Sbjct: 383 PGQEEIDSCVNILQQVAPQLPREAPLIVALPLYAALSPAQQSKIFEKLPGRKRKVILATN 442 Query: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409 +AETS+TV G+KYVID G ++ + ++ + L PISQASA QR GR GR S G Sbjct: 443 IAETSITVSGVKYVIDSGLRKVKVWKHQLGLSTLLTTPISQASAKQRAGRAGRESPGKVF 502 Query: 410 RLYSED-DFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRL 468 RLYSE F P+ + EI+R ++ IL + +G+ D+ + ++E P + I + Sbjct: 503 RLYSEKTFFNQLPKQQESEIMRNDIVLPILTLKKIGVDDLLNWTWLEHPGQEAILSALTT 562 Query: 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ 528 L LGA+ + K+T LG ++S LP+ P+L+ ++L A G + + I + +S+ Sbjct: 563 LYSLGALDD-----SGKITKLGYKMSVLPLPPQLSVVLLSALDFGVLSSVIDIVACISVD 617 Query: 529 DPRER----PMDKQQASDEKHRR---FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLC 581 + + + + K R K+ D +A ++Y E +++ + C Sbjct: 618 NLILNVGSGNGEIRDEINFKRRNYCPLGCKQGDLIAVKEFFSYYKELIDNGNTSEAKAWC 677 Query: 582 RTDYLNYLRVREWQDIYTQLRQVV-----------------------------------K 606 + + +Y + + QL+ + Sbjct: 678 KELHFSYKGFKNVMRVRNQLKDYMMATVRQDDTLKQHERDQQLRNIKLQLDAESLLDDDS 737 Query: 607 ELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP- 665 + V+ +P + I + L G +++ + D+ T SI P S LF K Sbjct: 738 DADTGVSKQPLDIPAILKSFLKGYITNTAIGMPDRSYRTCTTGQLISIHPSSTLFGKANL 797 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 +M E V T++ +GR + I+ W++ +A L+ Sbjct: 798 DAIMYIEYVYTAKGYGRNCSVIELGWLQEIAPQLL 832 >UniRef50_D0NMK0 Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NMK0_PHYIN Length = 912 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 203/692 (29%), Positives = 340/692 (49%), Gaps = 78/692 (11%) Query: 74 PDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL--------- 124 P LP + +++IL+A+ DHQVV+ GETGSGKTTQLP+ G Sbjct: 152 PTPLPALEHREEILQALNDHQVVVCVGETGSGKTTQLPQFLHVCGAYTSSKGGGDEKSQC 211 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGG--CIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 I TQPRR+A +VA R+AEE+ T GG +GY +RF S NT +K +TDG+L+ E Sbjct: 212 IAITQPRRVATVSVAQRVAEEMNTRVGGDGVVGYSIRFESRCSVNTKLKFLTDGVLVREC 271 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 D LL +Y +++DEAHERS++ D LLG LK++ RRP+ +++ITSAT+D ERF+ F Sbjct: 272 LSDPLLQKYSVVMLDEAHERSVHTDLLLGLLKQVTKRRPEFRVLITSATLDAERFAEFFG 331 Query: 243 ------------NAPIIEVSGRTYPVEVRYRPIVEE--ADDTERDQLQAIFDAVDELS-Q 287 PI+++ GR +PV++ + + ++A + ++ Sbjct: 332 ESIGKKSKKKVKPCPIVKIPGRVFPVDIFHSKQRQIMGHRGPLSTYVRAAVETTMQVHNS 391 Query: 288 ESHGDILIFMSGEREIRDTADALNKLNLR--------HTEILPLYARLSNSEQNRVFQS- 338 E G IL+F++G+REI D + L+ +LPLY L Q +F + Sbjct: 392 EEPGHILVFLTGQREIEDACAQMRALHREQERRSDGMELRVLPLYGALQGQRQREIFDAV 451 Query: 339 --HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 R++++ATN+AETSLT+ G++YV+D G + Y+ +++ L + PIS+ SA QR Sbjct: 452 SVSRVRKVIVATNIAETSLTIDGVRYVVDCGFTKQKVYNPVQQMESLVVVPISKVSAQQR 511 Query: 397 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 GR GR + G C RLY++ + + T PEI RTNLA+ +L + LG+ D+ FP+++ Sbjct: 512 AGRAGRTAPGKCYRLYNKTSYEEMAQETVPEIQRTNLANTVLYLKLLGVQDVIGFPYLDP 571 Query: 457 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 PD+ ++ D ++ L LGA+ +A T LG+ ++ P++P+L+R ++E+ C R Sbjct: 572 PDEDSLLDALKQLYVLGALDATGEA-----TALGKLMAVFPLEPKLSRALVESLLLDCSR 626 Query: 517 EAMIITSALSIQDPRERPMDKQQASDE----------------KHRRFHDKESDFLAFVN 560 E + + LS+++ ++ + + ++ D L + Sbjct: 627 EMTQVVAMLSVENVLIDAQQNKKRKNRDGSDEGEDWEQNMLTLREDGLLHEDGDQLTYRL 686 Query: 561 LWNYLGEQQKA--LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS---- 614 L + ++ R C L + + I QLR ++ L Sbjct: 687 LLKAFESKARSAQGRRRDVERWCDDRRLRFRALTMAGSIVKQLRDILDTLSRRDVEAVKG 746 Query: 615 ------EPAEYREIHIALLTGLLSHIGMKDADKQEYTGARN-------ARFSIFPGSGL- 660 + + + +L G + + + Y + P S + Sbjct: 747 EKDDRRDASLDDRLRQSLCAGFFMNAARRCTMETVYRLVNHDDGKKVAHLVQFHPLSVMC 806 Query: 661 FKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + PP++ + ELV TS+ + R A ++ W+ Sbjct: 807 YTAPPEFCVYQELVVTSKPFMRGALAVERRWL 838 >UniRef50_Q4QAM3 Pre-mRNA splicing factor, putative n=6 Tax=Trypanosomatidae RepID=Q4QAM3_LEIMA Length = 1138 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 208/698 (29%), Positives = 364/698 (52%), Gaps = 41/698 (5%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 SRR +++ + ++A + +A + D+ + +R ++LP+ K ++L Sbjct: 386 SRRQRKDEQLARIEGRKAQMETLADDADEVERRDAMRR-------QRESLPIHHCKDELL 438 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG-HTQPRRLAARTVANRIAEEL 146 + + V +V GETGSGKTTQL + + G G I TQPRRLAA VA R+++E+ Sbjct: 439 RYVGESAVTVVVGETGSGKTTQLVQYLYQRGYARHGKIIGCTQPRRLAAIGVARRVSDEM 498 Query: 147 KTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNI 206 G +GY + D + +T VK MTDG+LL E D L +Y +++DEAHERS++ Sbjct: 499 GCALGTTVGYSIHLDDTTTADTRVKFMTDGVLLRETVNDPSLDKYSVVMLDEAHERSVDT 558 Query: 207 DFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEE 266 D L+G LK L RR DLK+I+TSAT+D +FS F NAP E+ G+T+PV++ Y Sbjct: 559 DVLMGVLKLALRRRGDLKLIVTSATMDVRKFSAFFGNAPCYEIPGQTFPVKIHYSATP-- 616 Query: 267 ADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADA----LNKLNLRHTEILP 322 D + + + ++ E+ DIL+FM+G ++ T + L +L+ +H L Sbjct: 617 VADYVAEAVFRVCQLHLQMPLEAKHDILVFMTGREDVYGTCELIRRRLTELSPQHLSTLL 676 Query: 323 LYARLSNSEQNR-----VFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375 + + LS + R V + R++V+ATNVAETSLT+ G++YV+D G + + Y Sbjct: 677 IISCLSEAAPARSTEIGVLEATPAGLRKVVVATNVAETSLTIDGVRYVVDCGFMKTNVYR 736 Query: 376 YRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF-LSRPEFTDPEILRTNLA 434 + L P SQA ANQRKGR GR +EG C RLY+E + + PEI R+++ Sbjct: 737 PSIGMNTLQRYPTSQAQANQRKGRAGRTTEGTCYRLYTEVQYAEEMLPNSVPEIQRSSVD 796 Query: 435 SVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLS 494 SV+L + ++G+ + F F++AP N++ + L LG + A +T G+Q Sbjct: 797 SVVLLLKSIGVHRLRDFEFMDAPPAANVRSSMFHLWVLGFLDD-----AGAITAPGQQAL 851 Query: 495 QLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ--DPRERPMDKQQASDEKHRRFHDKE 552 + P+ P LA+++LE+ GC E I + +S + E P +++ + + H RF+ + Sbjct: 852 EFPMSPVLAKLLLESATMGCALEMARIVAMISADPKNLFELPKGREKVAQQHHSRFYAND 911 Query: 553 SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 SD L ++++ + + R+ + +L+ + D++ QL + +++L +P+ Sbjct: 912 SDHLTLLHVFTQYLDHGR------SRQWAQDHFLHAPTLARAHDVFAQLIEKLRKLHLPI 965 Query: 613 NSEP-AEYREIHIALLTGLLSHIGMKDADK-QEY--TGARNARFSIFPGSGLFKKP--PK 666 S AE ++ L + + + EY ++ P S + + P Sbjct: 966 QSCGHAETDKVRHCLAKAFVLQAARRSDRRWTEYRPLLNAGVACAVHPASAVHARSEMPP 1025 Query: 667 WVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTY 704 +++ +L+ T + + + ++PEW+ ++ + + + Sbjct: 1026 YIIYNDLLLTHKEYLVMVTAVEPEWLVESSRGIYEMRH 1063 >UniRef50_Q4Q2X4 ATP-dependent RNA helicase-like protein n=3 Tax=Leishmania RepID=Q4Q2X4_LEIMA Length = 805 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 230/745 (30%), Positives = 357/745 (47%), Gaps = 82/745 (11%) Query: 40 PDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA 99 P + + + + R + LPV +K+ I E +R + V ++ Sbjct: 64 PKKRPDMAACTSSSALSPFTRQPFSARYRQLLQSRQRLPVFEKRHLIQETVRTNAVTLLV 123 Query: 100 GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVR 159 GETGSGKTTQ+P EL G+I TQPRR+AA +VA R+AEE+ G +GY VR Sbjct: 124 GETGSGKTTQVPHFLAELQDAFTGVIACTQPRRIAAISVATRVAEEMDVPLGAHVGYHVR 183 Query: 160 FSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR 219 F D T V MTDG+LL E D L +Y +++DEAHER+++ D +LG LK LL R Sbjct: 184 FDSRQCDATRVLYMTDGMLLREAFTDSDLQKYSVVVVDEAHERTIDTDVVLGLLKRLLTR 243 Query: 220 RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIF 279 RP ++++ SAT+D + +F AP++ VSGR + V+V Y P RD ++A Sbjct: 244 RPLFRLVVMSATLDVAKIQSYFPGAPLVHVSGRMHDVDVLYMP------HPVRDYVEATV 297 Query: 280 DAVDELS-QESHGDILIFMSGEREIRDTADALNKL------------------------- 313 V +L +E GDIL F++GE EI AL++ Sbjct: 298 SCVLQLHEREPAGDILCFLTGEAEIERAVAALHQALGSSSAAASKEQNAPTQGPGKGLTV 357 Query: 314 ---------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKY 362 ++PLY LS EQ +VF + R++V+ATN+AETS+T+ GI Y Sbjct: 358 LNTPADDLARPTEVVVVPLYGSLSLQEQQKVFATYPPNTRKVVVATNIAETSVTIDGIVY 417 Query: 363 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPE 422 V+D G + S Y+ +V L IS+ASA QR GR GR G C RL++ DF + P+ Sbjct: 418 VVDCGYQKQSLYNSEARVDYLLPAVISKASAEQRTGRAGRTRPGKCFRLFTSADFATFPD 477 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 T PEILRTN+ + +L + LG+ + FPF++ P + + D L GA+ Sbjct: 478 QTHPEILRTNIVNTVLLLLTLGVANPCEFPFIDPPSDQGMSDAFYQLLYFGAVDD----- 532 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASD 542 +LT GR+++ LPVD LARM+L A KHGC +A ++ + L + RP + + Sbjct: 533 GLQLTDFGRRMAVLPVDVCLARMLLMAPKHGCGADAAVVAAMLEAGNAFSRPPSRLAEAR 592 Query: 543 EKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602 E H RF + + D +A +++ + Q+ +R C +YL + +++ +Y QLR Sbjct: 593 EAHARFDNADGDHVALFRVFHAYFKNQQNG-----KRFCYENYLRHQTLQQAVQVYKQLR 647 Query: 603 QVVKELGIPVNS------EPAEYREIHIALLTGLLSHIGMKDA-------------DKQE 643 +++ +L IPV S E + + A+L G + + + Sbjct: 648 RLMSQLMIPVQSTYIPEREYVDTVALRKAVLEGFFTQVAFLTPVAPITHRAGADPTTRVY 707 Query: 644 YTGARNARFSIFPGSGLF-----KKPPKWVMV--AELVETSRLWGRIAARIDPEWVEPVA 696 T ++ S L + P W++ E+ S + R A+ ++ W+ V Sbjct: 708 RTVRDALSATLHRQSVLAAAHKLRALPTWIVFDRLEVQGDSGTFIRTASAVEVGWLLDV- 766 Query: 697 QHLIKRTYSEPHWERAQGAVMATEK 721 P + V+ + Sbjct: 767 SDFYTDLSEIP--DGEIAQVLRRAR 789 >UniRef50_A7AU05 Helicase associated domain containing protein n=2 Tax=Piroplasmida RepID=A7AU05_BABBO Length = 668 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 204/672 (30%), Positives = 338/672 (50%), Gaps = 66/672 (9%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 + P+ K +IL ++ QV+++ GETGSGK+T LPKI E G G I TQPRR+AA Sbjct: 6 DFPIWFHKDEILSKLKTSQVLVLTGETGSGKSTLLPKILYENGYGDS-TIVVTQPRRVAA 64 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A +A T+ G +GY VRFS+ S+ T +K +TDG+L E+ D++ +Y ++ Sbjct: 65 ISLARHVASLFNTDLGRLVGYAVRFSNCYSEETRIKYVTDGVLFQEVLDDQIFSRYSVVV 124 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 IDEAHERS+ D LLG L+ + RR DLK++I SAT+ FS F A ++ V GRTYP Sbjct: 125 IDEAHERSIRTDVLLGILRTSIKRRLDLKVVIMSATLKSITFSSFFEGAAVVRVPGRTYP 184 Query: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL- 313 +++ Y P + D L+A V +++ GDIL+F+ G+ +I + +++ Sbjct: 185 LDIYYTP------QPQEDYLEAAMLTVLQINFTYKKGDILVFLPGQDDIETLENMISEKV 238 Query: 314 -------------------------------------NLRHTEILPLYARLSNSEQNRVF 336 + +I+PLYA L +Q++VF Sbjct: 239 EAVKEFIKSTGDQINGKLSKIKKYTEVLLGDTPYDLKHWMELQIVPLYAALPLEQQSKVF 298 Query: 337 QSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 Q R++VLATN+AETS+T+PGI++V+D G + +S + + L ++ IS+ SA+ Sbjct: 299 QVPGDGCRKVVLATNIAETSVTIPGIRFVVDSGLVKQKLFSVKKCFESLVLQKISKDSAH 358 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GR GR+ G RLY+ + F S PEI TN+A + L++ +G+ + FP + Sbjct: 359 QRAGRAGRMGPGKVFRLYTSEAFNSMRLCRIPEIQCTNVAHIYLELKMIGVHNPLEFPLI 418 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 +AP K + L L A+ T LT +G ++ ++P+ PR AR++L + + C Sbjct: 419 DAPSKNALLSAAMELYRLDALDTKTN-----LTDIGMKMGRIPLLPRHARLLLLSLEFKC 473 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 E + I + LS ++ S + + +K D L+ +N++N + Sbjct: 474 TSEILTIVAMLSTDMTLFTSERHEKESAKMRKNIINKSGDHLSLLNMYNIWNDSPNK--- 530 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE----LGIPVNSEPAEYREIHIALLTGL 630 + CR N + +I QL +V+ + + +P + +E+ + L Sbjct: 531 ---KECCRQFGFNPGAFKRAAEIRNQLVEVLTKRIGVMNVPSCKDSSEWDTVLKCLCRAN 587 Query: 631 LSHIGMKDADKQEYTG-ARNARFSIFPGSGLFKKP--PKWVMVAELVETSRLWGRIAARI 687 ++ D D + Y +N + I P S LF + P V+ E T +++ + + I Sbjct: 588 WMNLASLDTDGKSYKLEVQNTKVMIHPHSVLFTRRPCPPLVIFDECSSTKKVYIQNVSEI 647 Query: 688 DPEWVEPVAQHL 699 EWV + +L Sbjct: 648 SHEWVAQLLPNL 659 >UniRef50_Q22ZC0 Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22ZC0_TETTH Length = 699 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 213/721 (29%), Positives = 343/721 (47%), Gaps = 80/721 (11%) Query: 30 RLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEA 89 + + QQ I E K + NLP+ + +Q +L+ Sbjct: 2 EIEKSQSPNKSTVQQQILVEKNKNGNLGL--------FNKLQKERKNLPIFKHRQGLLDK 53 Query: 90 IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTE 149 I+ +Q+ ++AGETG GKTTQ+P+ +E G +I TQPRR+AA T+A R+A+E+ T Sbjct: 54 IKSNQISVIAGETGCGKTTQIPQYLIEEGLNKNRMIAVTQPRRVAAITIAQRVAQEMNTT 113 Query: 150 PGGCIGYKVRFSDHVSDN-TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDF 208 G +GY VRF + V N T + MTDG+LL E D L ++ I+IDEAHER++N D Sbjct: 114 VGNKVGYSVRFEEAVDKNNTKLLYMTDGMLLRETIVDPNLSRFSIIVIDEAHERTINSDL 173 Query: 209 LLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEAD 268 L+ LK+L RR DLKIII SATI+ E+F+ F II + GR +P+EV Y Sbjct: 174 LISLLKQLSERRKDLKIIIMSATIETEKFANFFETENIIYLEGRCHPIEVFYS------K 227 Query: 269 DTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL------NLRHTEIL 321 D L A + + ++ +E GDIL F+ G+ +I D L + + I Sbjct: 228 KPHADYLDAALNTILQIHFEEQDGDILCFLVGQEDIEDMQQMLEEKIELFPKEAKKLNIC 287 Query: 322 PLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK 379 LYA L + Q F+ R++VL+TN+AETS+T+ GIKYV+DPG + +Y+ Sbjct: 288 TLYAALPSHLQLLAFEKSQEGERKVVLSTNIAETSVTIDGIKYVVDPGLVKTRKYNPNKL 347 Query: 380 VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ 439 ++ L + P+S++SA QR GR GR S G C RLY++ + EF PEILR+NL++VILQ Sbjct: 348 IEMLLVVPVSKSSAMQRAGRAGRQSAGKCFRLYTKYTHDTLAEFMLPEILRSNLSTVILQ 407 Query: 440 MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD 499 M A+G+ D+ F F++ P + + + L+++ A+ +E +T G+++++LP++ Sbjct: 408 MKAIGIKDVKGFQFIDRPHEDQFIESIENLQQMNALDANEN-----ITLHGKEMAELPLE 462 Query: 500 PRLARMVLEAQK--HGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 P A +L A + + S + +++ P + + + RF SD L Sbjct: 463 PIYAHFMLVAFATNPNSISVVLSAISLMQVENLFFIPKGAKISLLDVLLRFQLGNSDQLT 522 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV------------- 604 VN+ + + S C+ +++N +++ ++ QL Sbjct: 523 KVNMLHQYYLAKNKKS------FCKENFINQKNIKKALEVRQQLENYFLDILKKRSKKNQ 576 Query: 605 ----------------------------VKELGIPVNSEPAEYREIHIALLTGLLSHIGM 636 ++E + E + GL Sbjct: 577 KQNQANIQQQSEEQQIQEELAKGNTLKKLQEEHKTAIQQEINTEEFISCIAKGLSVKAAK 636 Query: 637 KDADKQEYTGARNARFSIFPGSGLF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEP 694 + D N + I P S LF K P +++ E+V T + + R I + Sbjct: 637 LNNDGTYTIIRSNIQAYIHPESLLFYSKPKPDYIIFNEVVSTIKTYLRDITEISFSDFKE 696 Query: 695 V 695 + Sbjct: 697 I 697 >UniRef50_A8PRC9 DEAH, putative n=1 Tax=Brugia malayi RepID=A8PRC9_BRUMA Length = 681 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 214/663 (32%), Positives = 333/663 (50%), Gaps = 26/663 (3%) Query: 52 KEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLP 111 K Q A + A+ + LPV + E IR + + ++ GETGSGK+TQ+P Sbjct: 4 KRYKQNACNIDQCPVAKKKFR-RKELPVDGVHLQLAEVIRQNGISVIVGETGSGKSTQIP 62 Query: 112 KICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVK 171 +IC G GL+ TQPRR+AA T+A R+A E+ G + YKVRF + SD T + Sbjct: 63 QICYNEGLIGSGLLAVTQPRRVAAITLAKRVALEMNANLGEVVAYKVRFENTTSDETKIV 122 Query: 172 LMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR----PDLK--- 224 TDGI L E D LL Y +I+DEAHERS++ D LL LK +R LK Sbjct: 123 YGTDGIFLRETFYDSLLTPYSIVIVDEAHERSVHTDILLYLLKLCYKQRLGTSNPLKLRF 182 Query: 225 --IIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAV 282 ++I SAT++ FS +F+NAP+ V GRTYPVE+ Y +++ DD D + + V Sbjct: 183 LLVVIMSATLETNVFSEYFDNAPVYIVQGRTYPVEIFYANSLDKKDD---DYVFNVLTTV 239 Query: 283 DELSQESH--GDILIFMSGEREIRDTADALNKLN---LRHTEILPLYARLSNSEQNRVFQ 337 ++ + D+L F++G+ EI + + + LPLYA L S Q RVF+ Sbjct: 240 LQIHRTEPLSSDVLAFLTGQEEIETACKKVQEASRLLPGDLVALPLYAGLPPSAQMRVFE 299 Query: 338 SHS---GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 R+++ ATN+AETS+T+PG++ ++D G ++ + + L +E ISQ SA Sbjct: 300 PAGIPHTRKVIFATNIAETSITIPGVRIIVDSGKIKVKTFLPDRHIDILRVENISQCSAT 359 Query: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 QR GR GR + G C RLYSE F S + T PEILR+NL+ V+L++ +GL I + + Sbjct: 360 QRAGRAGREAPGKCYRLYSEKHFHSLSKITVPEILRSNLSVVLLELLRIGLRRIKSLALI 419 Query: 455 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 P K ++ + L L A+ ++ KLT +G +LS PVDP AR ++ A ++GC Sbjct: 420 SNPKKEGLEAAEKHLRLLDAVKQPDEKGRLKLTEMGTRLSSFPVDPAFARALIAASQNGC 479 Query: 515 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 + E + I + +SI + ++ R+F E D +N++ +K Sbjct: 480 LEEVLTIVAFMSIDSVFVSSAVGHERTNLSKRKFEAPEGDHCTLLNVYRGYRLARKEK-- 537 Query: 575 NAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHI 634 C ++++ + I QLR + + + S + + L GL + Sbjct: 538 -KLEEWCEANHVHQRLLNTVFKIRRQLRDICLKNSLIFRSCGTDTDRLRKTLCQGLFMNA 596 Query: 635 GMKDADKQEY--TGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWV 692 + + + Y + I P S L + P + +LV T+ L+ R ID EW Sbjct: 597 CVYERSQDRYSLLISPGTSLKIHPSSCLSRSRPTAFIFTDLVRTNELYARDITVIDLEWA 656 Query: 693 EPV 695 + + Sbjct: 657 KEL 659 >UniRef50_C8PMN0 ATP-dependent RNA helicase HrpA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMN0_9SPIO Length = 898 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 239/638 (37%), Positives = 362/638 (56%), Gaps = 23/638 (3%) Query: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135 LPV ++K ILE++ HQV++V TGSGKTTQLP I E G G+IG TQPRR+AA Sbjct: 6 QLPVYEQKARILESLERHQVIVVESPTGSGKTTQLPVILHEAGYTQTGIIGVTQPRRIAA 65 Query: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 +V+ IA +L+ G +GYK+RF DH S +T +K+MTDGILL E++ D L +Y I+ Sbjct: 66 LSVSEFIANQLRVPLGELVGYKMRFEDHTSPDTKIKIMTDGILLQELKLDPWLSKYSVIM 125 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255 +DEAHERSLNIDF+LG LK +L R D K+II+SATI+ + FS +FN P+I++ TYP Sbjct: 126 VDEAHERSLNIDFILGLLKRILQERQDFKVIISSATINTDMFSMYFNECPVIKIDAMTYP 185 Query: 256 VEVRYRPIVEEADDT----ERDQLQAIFDAVDELSQES-HGDILIFMSGEREIRDTADAL 310 V + + P A E L I V + E G IL+F+ GER I+D + L Sbjct: 186 VTLIFDPPALTASTETLAAETALLDKIAVIVGRILSEGRPGAILVFLPGERAIKDCIERL 245 Query: 311 NKLNL-RHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVIDPG 367 + R LPLY RLS EQ RVF+ ++IV+ATN+AETS+T+ I VID G Sbjct: 246 SHEPWFRKLYPLPLYGRLSKEEQERVFKSPPFGKKKIVIATNIAETSITINDIAAVIDSG 305 Query: 368 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPE 427 ++++ Y+ T L P+S+AS NQR+GR GR EG+C RLY+ DF +R +T E Sbjct: 306 LSKLNFYNPFTYTSSLDEAPVSKASCNQRRGRAGRTQEGVCYRLYTRKDFETRVMYTTEE 365 Query: 428 ILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT 487 I RT+L+ V+++M LG+ D A F F+ P K+ I V L LGA+ +D L+ Sbjct: 366 IYRTDLSEVVMRMAELGIYDFANFDFISPPGKKGIIGAVDTLNMLGALESDN-----SLS 420 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKH--GCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 +G+ + P+ PR +RM++EA + + + +I LS + P P ++ + + H Sbjct: 421 KIGQMMCLFPLSPRQSRMIVEAVLYYPESIEDVLIAAGFLSARSPFLFPDGQELEARKAH 480 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 F D DF++F+ ++ + + +R C YL+ + E +I QL +V Sbjct: 481 AAFRDPLGDFVSFLKVYRQYMQAENQ------KRFCERSYLDERIMAEIANIKEQLELIV 534 Query: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665 ++G+P+ S + A+ G++ + + Y + SI PGS ++K+ P Sbjct: 535 SDMGVPILSGGKPSDYL-TAVARGMIQFVCAAQ-GRDVYRSLTTEKISIHPGSCMYKERP 592 Query: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 +++ E+V TSR++ + + + V VA L+ + Sbjct: 593 SYIVAGEIVHTSRMYAMSVSPLSKDIVALVAPALLGKK 630 >UniRef50_Q4E099 ATP-dependent DEAD/H RNA helicase, putative n=5 Tax=Trypanosoma RepID=Q4E099_TRYCR Length = 887 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 226/768 (29%), Positives = 363/768 (47%), Gaps = 116/768 (15%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQ 94 +++K D + +E K+ A + R +LP+ ++ +LE IR + Sbjct: 131 ERIKKHDFVEDKTEEQIKQQRTEAIQEQHRR----LQEQRRSLPIYHSREALLEIIRKNT 186 Query: 95 VVIVAGETGSGKTTQLPKICMELGRGIK-----------------------------GLI 125 VVI+ GETGSGKTTQL + E Sbjct: 187 VVIIVGETGSGKTTQLLQYLYEENLCRTPPCLTEGGDGGGKGKEEKEGEEEEGTSEEKRF 246 Query: 126 GHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQD 185 TQPRR+AA +VA R+A+E+ T G +GYKVRF + + T + +TDG++L E+ D Sbjct: 247 ICTQPRRIAAISVAERVAQEMNTRCGSIVGYKVRFDEKLGPTTRLLFVTDGMMLKELVGD 306 Query: 186 RLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAP 245 L I++DEAHERS+N D LLG LK++ R LK+I+ SATI+ E+FS F+ AP Sbjct: 307 PELRTVSAIMVDEAHERSINTDILLGLLKDITRRNKQLKVIVASATINAEKFSSFFDGAP 366 Query: 246 IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES--HGDILIFMSGEREI 303 I + GRT+PV+V Y + D + A ++V L GDIL+F+ G+ +I Sbjct: 367 IFTIKGRTFPVDVSYL------TEPMADYVSATAESVLLLHATKPLPGDILVFLPGQEDI 420 Query: 304 RDTADALNK------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSL 355 + A A+ + LR +LP+YA L EQ R+++ + R++V+ATN+AETS+ Sbjct: 421 ENCAAAIREGIANSGGQLRPLMVLPIYASLPPREQRRIYEVPPPTTRKVVIATNIAETSI 480 Query: 356 TVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSED 415 T+ G+ YV+D G + + Y+Y++ V+ L + PISQASA QR GR GR +G C RLY+ Sbjct: 481 TIDGVVYVVDCGLCKQNYYNYQSMVEELRVLPISQASAKQRTGRAGRTQKGECYRLYTAY 540 Query: 416 DF-LSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 F P+ T PEI R+ ++SV+LQ+ ALG+ ++ F F++AP +++ + L LGA Sbjct: 541 TFRNELPQETVPEIQRSCMSSVVLQLKALGIDNLLQFEFIDAPSTASLERALDHLYLLGA 600 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 I + +LT GR++++ P+DP L++ +L C+R I + L++ Sbjct: 601 IKPNG-----RLTLTGRRMAEFPLDPSLSKCILRGSALRCLRHMAIAVAMLTLDSVFVVS 655 Query: 535 MDKQQASDEKHRR---FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 D ++ + R F D + +V L ++ C++ +N + Sbjct: 656 RDPKERASIASARDVLFSAGNGDVMGYVRLMEEWMRAGPSM-----HEFCQSHSVNAKAL 710 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAE----YREIHIALLTGLLSHIGMKDADKQEYTGA 647 + +D+ Q+ + LG+ + S E ALL G ++ +AD++ Y Sbjct: 711 LQARDVLDQILNTCERLGLDLPSGEEETSLSMENFTKALLAGFFMNVAKLNADRRTYLIV 770 Query: 648 R-----------------------NARFSIFPGSGLF----------------------- 661 R A + P S LF Sbjct: 771 RPIDASVSRSGHNHNNYNALDAEETATAELHPSSYLFNAGLEKKDGKSNRNGSMVSTAPT 830 Query: 662 -KKPPKWVMVAELVETSRLWGRIAARIDP-EWVEPVAQ-HLIKRTYSE 706 ++ P+ V+ +L TS+ + I +WV A + R E Sbjct: 831 LRERPELVVFTQLRYTSKRYMMHVTAISSVDWVLTTAPENYFTREELE 878 >UniRef50_A7NAU7 ATP-dependent helicase n=16 Tax=Francisella RepID=A7NAU7_FRATF Length = 1444 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 317/594 (53%), Positives = 424/594 (71%), Gaps = 12/594 (2%) Query: 61 VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG 120 ++ P+ITYP +LPV+++ DI + ++D+QV++VAGETGSGK+TQLPKIC++LG G Sbjct: 43 EQTKQKILPKITYP-DLPVAERVDDIKKLLQDNQVIVVAGETGSGKSTQLPKICLDLGLG 101 Query: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180 +GLIGHTQPRRLAAR++A+RIA E+ + + +K+RFSD S+NT++K+MTDG+LL+ Sbjct: 102 KRGLIGHTQPRRLAARSIASRIANEIGDQ--SKVSFKIRFSDQTSENTLIKVMTDGVLLS 159 Query: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240 EI+ DR L QY+ IIIDEAHERSLNIDFLLG +K++LP RPDLK+IITSATID ++F Sbjct: 160 EIKNDRFLSQYEVIIIDEAHERSLNIDFLLGCIKKILPFRPDLKVIITSATIDHQKFINF 219 Query: 241 FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGE 300 F NA I +SGRTYPVE+RY+ + D E + I A+DEL GD+L+F+ E Sbjct: 220 FQNAKDIIISGRTYPVEIRYQ---NDEDFDEFSLQERILYALDEL---GRGDVLVFLPTE 273 Query: 301 REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSG-RRIVLATNVAETSLTVPG 359 R+I +T LNK NLR TE+LPL++RLSN +QN++F RR++LATNVAETSLTVP Sbjct: 274 RDIHETLAYLNKQNLRFTEVLPLFSRLSNKDQNKIFNPEGSVRRVILATNVAETSLTVPR 333 Query: 360 IKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS 419 IKYVID G ARISRYSYRTKVQRLPIE ISQASANQR GRCGR+S GICIRLYSE+DF + Sbjct: 334 IKYVIDSGLARISRYSYRTKVQRLPIEKISQASANQRAGRCGRLSAGICIRLYSEEDFNN 393 Query: 420 RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDE 479 R E+T+PEILRTNLASVILQM L LG I FPF++APD R ++DG +LL EL AI ++ Sbjct: 394 RKEYTEPEILRTNLASVILQMLFLKLGSIQDFPFIDAPDARFVKDGFKLLFELQAI-SEL 452 Query: 480 QASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539 S K+T G +++ +P+DP+LA++V+E + +RE + I S LS+QDPRERP++ QQ Sbjct: 453 NYSKPKITDDGMKMAVMPLDPKLAKIVIEGYRQKTLREIVSIVSFLSVQDPRERPLNLQQ 512 Query: 540 ASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYT 599 +DEKH DK SDF+A +NL N L K LS+ + + ++++ +R EW DIY Sbjct: 513 KADEKHSVDKDKSSDFVAILNLANRLNSDLKGLSNREKKEYFKKNFISLVRFNEWNDIYR 572 Query: 600 QLRQVVKELGIPVNSE-PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARF 652 Q+ +V+ G +NS+ + H L HIG ++ + + Sbjct: 573 QIIEVIHGFGWKLNSQLVIKKDSGHSGLDPESFEHIGKSHDNEILKQVHNDRQI 626 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 171/515 (33%), Positives = 286/515 (55%), Gaps = 11/515 (2%) Query: 614 SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAEL 673 S Y +H A+ +G LS+IG + + EY GAR +F IFPGS FK PKW++ +E+ Sbjct: 664 SAMINYENLHKAIASGFLSNIG-YNYENAEYLGARGLKFFIFPGSFQFKAKPKWLLSSEI 722 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAAR 733 VET++ + R A+I+PEW+E +A HL+K+ Y EP W + + AV+ E+VT+YGL IV+ R Sbjct: 723 VETTKTYVRNVAKIEPEWLESLASHLVKKHYDEPVWSKKRRAVIVNERVTLYGLEIVSKR 782 Query: 734 KVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDE 793 V YS+I+P RE+FIR ALV+GD+ ++ F+++NLKL +VE+LE+KSRR+DILVD++ Sbjct: 783 VVQYSKINPREAREIFIREALVKGDFDSKTYFYQQNLKLINQVEDLENKSRRKDILVDEQ 842 Query: 794 TLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWH 853 T+FE YD IS +V + FD W K V + F L++ GA++I++ +P+ Sbjct: 843 TMFEHYDAFISDEVCNGATFDKWLKTVRKAQQQKFIFGLESLMQHGAKEITQQKFPDVLT 902 Query: 854 QGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKP 913 G++ L L Y F+P + DG TV +P+ +N + + EW + G + ++AL+++LPK Sbjct: 903 IGDMHLPLEYNFDPLDERDGATVTVPIVFINNISSAVLEWGVYGFLYDKIVALLRALPKN 962 Query: 914 VRRNFVPAPNYAEAFLGRVKPLEL---PLLDSLERELRRMTGVTVDREDWHWDQVPDHLK 970 +R+N VP P YA+A + + PL + + + R+ G VD W +++ +L Sbjct: 963 IRKNCVPVPTYAQAIFESLDFDKDRYIPLKSVIAKHITRIVGFVVDETVWQNEELEKYLV 1022 Query: 971 ITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE 1030 + +VVD+ K L G+ + LK LK V + +++ + W F + + + Sbjct: 1023 LNIKVVDEHGKTLALGKDINTLKQKLKNLVNK-----PKQAVDEKIYYDWDFADIALTNQ 1077 Query: 1031 QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLP 1090 K VK + L + + V + E + M L+RL+ + + + + + Sbjct: 1078 IKEYGIVVKVYNCLEEYKGGVKLSYKATLAEAQSCMKRALKRLIKIRLQNQLSQKIKN-N 1136 Query: 1091 NKAKLGLYFNPYGKVLELIDDCISCG-VDKLIDAN 1124 + L + ++D I D +I ++ Sbjct: 1137 DLTSLSMSLKLSDSKDNVVDKAIDLSFFDDVISSD 1171 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 4/208 (1%) Query: 1093 AKLGLYFNPYGKVLELIDD-CISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVD 1151 + + + + D D G +T+ F + + Sbjct: 1217 QESSILKHDSKSSETMFSDYAQQSVQDDSNVNLAGLPYTKSDFEQFFKAGISSFVANKTK 1276 Query: 1152 IAKQVEQILTAVFNINKRLK-GRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTL 1210 + +IL A ++K+L ++ + + ++ ++ L +++ L Sbjct: 1277 VELLFTEILRAKEQLDKKLNINKIPLNFIELFTAVRNELNELFTDNYLSQ-PMIYLQRYK 1335 Query: 1211 RYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEE 1270 Y+QA+E RL+K ++ RDR L+ + ++ + + DE+V +IR++I+E Sbjct: 1336 YYIQALENRLDKAKLNLQRDRNYQLEADELKAKLAKKLVT-KHLSTGDEEVTKIRFLIKE 1394 Query: 1271 LRVSYFAQQLGTPYPISDKRILQAMEQI 1298 L +S++ Q + T IS K+IL + QI Sbjct: 1395 LWISWYLQNIKTSESISVKKILVYINQI 1422 >UniRef50_A4RR62 Predicted protein n=3 Tax=Mamiellales RepID=A4RR62_OSTLU Length = 724 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 230/684 (33%), Positives = 355/684 (51%), Gaps = 61/684 (8%) Query: 69 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL-IGH 127 P + D+LPVS+ DI A++ + V +V GETGSGKTTQ+ +I + G G + Sbjct: 12 PSTSSTDDLPVSRYANDIASAVKTNAVTVVIGETGSGKTTQIAQILLRSGVVADGSAVAV 71 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AA +VA R+AEE+ E G +GY VRF D T +K +TDG LL E+ +D Sbjct: 72 TQPRRVAAVSVAKRVAEEMGVEIGKEVGYSVRFEDRTCRLTRIKYLTDGTLLRELLEDPT 131 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L +Y +++DEAHERSL+ D L G LK+L+ R +LK++ITSAT+D E+FS +F++AP+ Sbjct: 132 LSRYSVVVLDEAHERSLHTDILFGLLKKLVSAR-ELKLVITSATLDSEKFSTYFDDAPVF 190 Query: 248 EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDT 306 V GRT+PV++ + A + + Q+ + V ++ GD+L+F++G+ EI Sbjct: 191 TVPGRTFPVQIAH------ATEAPKSYFQSAIETVVDVHVNTGPGDMLVFLTGQEEIEKA 244 Query: 307 ADALNKL-------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTV 357 A+ ++LPLYA L Q+RVF + RRI+ ATN+AETSLTV Sbjct: 245 CRAVEAHVRSMPEGECPDVQVLPLYASLPPDMQSRVFHPHDPNVRRIIFATNIAETSLTV 304 Query: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417 PGI +VIDPG + Y T + L + PIS A QR GR GR G C RLY++D Sbjct: 305 PGIVFVIDPGVVKQVEYDAMTGMNALKVVPISSVQAKQRAGRAGRTQAGRCYRLYTKDAL 364 Query: 418 L-SRPEFTDPEILRTNLASVILQMTALGLG--DIAAFPFVEAPDKRNIQDGVRLLEELGA 474 P T PEI RT L IL + L L D+ F F++ PD I D +R L +GA Sbjct: 365 ELDMPAITRPEIQRTCLVGTILYLKTLNLKGLDVMTFDFLDPPDTALIADALRQLYFVGA 424 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 I D +A T +GR++S LP++P L+R ++EA++ CV + + + LS++ Sbjct: 425 IDPDGKA-----TSIGREMSSLPLEPCLSRAMVEAKRLDCVADTATVAAMLSVERVFLGQ 479 Query: 535 MDKQQASDEKHRRFHDKE---SDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRV 591 + A++ H ++ D + ++ SS R+ + L+ + Sbjct: 480 H--RDATESLHELATHEDFLLGDHAVLLRIYQAWE------SSGYQRKFHQRYSLSDRGM 531 Query: 592 REWQDIYTQLRQVVKELGIPVNSEPAEYRE----------IHIALLTGLLSHIGMKDADK 641 ++I QL V K+ S+ ++ + +L G ++ I + + Sbjct: 532 EFAREIRKQLLGVFKD---KRKSDRNDFDCFSRTDEGLNRLRQSLCAGFVTKIAHRLPNH 588 Query: 642 QEYTGA--RNARFSIFPG--SGLFKKP---PKWVMVAELVETSRLWGRIAARIDPEWVEP 694 Y + + P L K P+W++ EL+ TSR + R +I+PEW+ Sbjct: 589 NGYRTLGENSTLCQVHPSMARQLADKDGLLPEWIVYHELITTSRPFLRHVCKIEPEWISK 648 Query: 695 VAQHLIKRTYSEPHWERAQGAVMA 718 + L K+ + R G V++ Sbjct: 649 QRELLSKK----VNIHRLSGGVLS 668 >UniRef50_Q3LVV7 Putative pre-mRNA splicing factor n=1 Tax=Bigelowiella natans RepID=Q3LVV7_BIGNA Length = 779 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 204/642 (31%), Positives = 344/642 (53%), Gaps = 31/642 (4%) Query: 73 YPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRR 132 + LP+ +++A+ + +IV ETG+GKTTQ+PK +G G G IG TQPRR Sbjct: 146 KQNQLPIINSFFPLMKAVDLYDTLIVVAETGAGKTTQIPKYLFSMGYGRLGQIGITQPRR 205 Query: 133 LAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYD 192 +AA VA R+A E+ + G +GY +RF D +S+ T +K MT+GILL EI + LL+QY Sbjct: 206 IAAINVATRVALEVNSSVGLLVGYVIRFEDCISNLTKIKFMTEGILLREIINEPLLLQYS 265 Query: 193 TIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGR 252 +++DEAHERS+ D L LK+L R DLK+II SATI+ +FS+ F+ AP+ ++ G+ Sbjct: 266 VLVLDEAHERSIFSDILFSLLKDLNILRSDLKLIICSATINTNKFSKFFSYAPLFQIPGK 325 Query: 253 TYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALN 311 Y VE+ + ++E D L A+ + ++ + GDIL+F++G+ +I + ++ Sbjct: 326 IYSVEIY------NSKESEIDYLDAVVRTILQIHIKSKQGDILVFLTGQEDIEIVENIIS 379 Query: 312 KLN------LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYV 363 K + + E PLYA LS + QN++F + R++VL+TN+AETSLT+ GI +V Sbjct: 380 KRSKLIKTLMGQLETFPLYANLSYNLQNKIFLKLPTNKRKVVLSTNIAETSLTISGITFV 439 Query: 364 IDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL-SRPE 422 ID G ++ + Y K + L + PI+++SA QR GR GR ++GIC RLY+ D + + Sbjct: 440 IDSGLCKLKYFDYLAKYETLIVSPIAKSSAWQRSGRAGRTAKGICFRLYTVDTYKFVLRK 499 Query: 423 FTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQAS 482 PEI R + SVIL + LG+ DI F F++ P ++ + L LG + + Q Sbjct: 500 AIVPEIQRIEIDSVILILKCLGINDINNFEFLDKPPVESVFASLEHLYILGGLNEEGQ-- 557 Query: 483 AYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD-PRERPMDKQQAS 541 L+ LGR + + P+ P L+++++ + H CV E +II S LS++ Sbjct: 558 ---LSKLGRYMCEFPLKPSLSKILIISNFHQCVEEILIICSILSLESRIFNYNHLNNVDQ 614 Query: 542 DEKHRRFH-DKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ 600 + ++F +SD L+++N++ ++++ + ++ + + + I+ Q Sbjct: 615 KQVLKKFTIIPKSDHLSYLNVFREW------INNDFSINWTDRNSIDAKIMFKARFIFEQ 668 Query: 601 LRQVVKEL--GIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 L + ++L + I LL+GL + + + + S+ P S Sbjct: 669 LLGLNQKLLNSQKIGINKTNPTMIIKCLLSGLFMNAAFFYSANCYRLLSSSTVVSVHPSS 728 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLI 700 L KWV+ +V T++ + + + EW+ A Sbjct: 729 LLLNYNTKWVVFQNIVLTNKEFINVITEVKIEWLIETAPIFY 770 >UniRef50_Q4Q0J4 RNA helicase, putative n=7 Tax=Trypanosomatidae RepID=Q4Q0J4_LEIMA Length = 697 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 208/704 (29%), Positives = 343/704 (48%), Gaps = 92/704 (13%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK---GLIGHTQPR 131 +LPV++ I+ IR +Q VIV GETGSGKTTQ+P+ + + G++G TQPR Sbjct: 6 PDLPVTEAWASIVRMIRKNQAVIVVGETGSGKTTQIPQYVWDDILSKRPGAGIVGCTQPR 65 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R+AA ++A +A + + GG + Y VRF D + T +K +TDGILL EIQ D +L +Y Sbjct: 66 RVAAVSIARHVARQRGGKVGGEVAYAVRFDDTCTSATRIKFLTDGILLREIQADPVLSKY 125 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEVS 250 II+DEAHER+L+ D L G LK + +R D LKI++ SAT++ E FS+ + NAPI V Sbjct: 126 GCIILDEAHERTLHGDVLFGLLKAIARQREDSLKIVVMSATLNAEHFSKFWWNAPIGVVH 185 Query: 251 GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVD-ELSQESHGDILIFMSGEREIRDTADA 309 GR +PV + + + + D ++A + E GDIL F++G+ E+ D Sbjct: 186 GRMFPVTIMH------TVEPQADYVEAAISTILLIHHTEPPGDILCFLTGQEEVEDAKRI 239 Query: 310 LNKLN------LRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIK 361 L + + +L LYA + +Q VF+ + R+++LATN+AETS+TV GI+ Sbjct: 240 LLERMKLLPNDVPDFSVLTLYAAMPYEQQLLVFEPNLNEQRKVILATNIAETSITVEGIR 299 Query: 362 YVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRP 421 YV+D G + Y+ ++ ++ L IS+A A QR GR GRV+ G C RLY+ + F + Sbjct: 300 YVVDSGVVKAKYYNSKSGMEMLTEVDISRAQATQRTGRAGRVAAGKCYRLYTANAFENLS 359 Query: 422 EFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQA 481 E T PEI R++L SV+LQM +L + +I AF F++ P R + L L A+ Sbjct: 360 ENTIPEIRRSSLLSVVLQMKSLHIHNILAFEFMDMPRPRAVAKAEETLMLLQALD----- 414 Query: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQAS 541 A +T LG +L+ P++P A ++L A+ G REA+I+ + S + + ++A+ Sbjct: 415 KAGHITALGARLTDFPIEPMPAMVLLAAKALGVAREAVIVIAMSSTDNLFLTSREFKEAA 474 Query: 542 DEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQ------ 595 D F D ++++ + + C ++ +++ ++ + + Sbjct: 475 DRCRAAFAKSAGDHATLLSIYQAYCHSPRD----QRKTWCESNAMSHRQMLKVEDVITQL 530 Query: 596 ------------------------------DIYTQLRQV------------------VKE 607 D+ TQL + ++ Sbjct: 531 QCILEEKSDSELLAKIIPASLRYLRAGAGGDLSTQLHKRPRGEIVDDTNDLLERYEELRH 590 Query: 608 LGIPVNSEPA-------EYREIHIALLTGLLSHIGMKDAD-KQEYTGARNARFSIFPGSG 659 G +++ + + AL G + +A T I P S Sbjct: 591 GGGGLSTGATERKGKLLDAELLRRALCFGYFLNAAFYNAKLGMYQTIVGQLPVYIHPSSV 650 Query: 660 LF--KKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 LF +K P V+ +V T++ + + + + EW++ A + Sbjct: 651 LFTHRKKPALVIFNSVVRTTKRYMKDVSVVQEEWLQDAAPDFLT 694 >UniRef50_B2SSX2 ATP-dependent helicase HrpA n=13 Tax=Xanthomonadaceae RepID=B2SSX2_XANOP Length = 1373 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 326/669 (48%), Positives = 440/669 (65%), Gaps = 29/669 (4%) Query: 7 LTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREA 66 T ++ +D M DR R + + + + + + R Sbjct: 10 NTLRERRRAVDGAMSHDRGRLLGLWSRWQGKPG---NPQVRDAFEQALAASQAQRQARAE 66 Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIG 126 +P IT + LP++++ + I+ IRDHQVV++AGETGSGKTTQLPK+C+ GRG G+IG Sbjct: 67 QQPAITLDNQLPIAREAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIG 126 Query: 127 HTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDR 186 TQPRR+AAR VA R+AEELKT G +G++VRF+D VS+ + +K MTDGILLAEI DR Sbjct: 127 CTQPRRIAARAVAARVAEELKTPLGTIVGFQVRFTDRVSEQSRIKFMTDGILLAEIASDR 186 Query: 187 LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPI 246 L YDTII+DEAHERSLNIDFLLGYLK+LL +R DLK+I+TSATID ERF++HF+NAP+ Sbjct: 187 WLSAYDTIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQHFDNAPV 246 Query: 247 IEVSGRTYPVEVRYRPIVEEADDT-----------ERDQLQAIFDAVDELSQ-ESHGDIL 294 I V GRT+PVEVRYRP+ + D+ ER AI A+DE+++ + GD+L Sbjct: 247 INVEGRTFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRIDPRGDVL 306 Query: 295 IFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS 354 +F+ GEREIRD AL + R TE++PLYARLS ++Q+RVF RR+VLATNVAETS Sbjct: 307 MFLPGEREIRDAHQALERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETS 366 Query: 355 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE 414 LTVP I+YV+DPG AR+ RYS R K+ RL IEPISQASANQR GRCGR++EGIC RLY+E Sbjct: 367 LTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGICYRLYAE 426 Query: 415 DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA 474 DF +RP FTDPEI R++L+ VIL+M LGLG I FPF+EAPD+R + DG + L ELGA Sbjct: 427 ADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQLLELGA 486 Query: 475 ITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP 534 I +LT G Q+++LPVD +LARM++ AQ+HGC+RE +II + L IQDPRERP Sbjct: 487 IDAQ-----RRLTATGCQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERP 541 Query: 535 MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594 + ++A+D H F D S+F+ + LW+ + + L+ + R C +L +LR+REW Sbjct: 542 AEAREAADNAHALFADVRSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREW 601 Query: 595 QDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSI 654 ++++ QLR + +ELG + LL G A + + R R + Sbjct: 602 RELHRQLRLLCEELGWSEEPANV----MLAPLLAG-----ASAPAREDGHNANRPTRGQL 652 Query: 655 FPGSGLFKK 663 + L ++ Sbjct: 653 HRAARLARE 661 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 222/689 (32%), Positives = 352/689 (51%), Gaps = 10/689 (1%) Query: 611 PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMV 670 A Y+ +H ALL GL + IG + +K +Y AR RF FPGS L +KPP W++ Sbjct: 692 SERERAAAYQSLHRALLAGLPTQIGHRT-EKGDYLAARQRRFVPFPGSALARKPPPWIVA 750 Query: 671 AELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIV 730 A L++T ++WG A I+P+W HL+ R + + HW RAQG V+A+E+++++GL + Sbjct: 751 ATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASEQISLFGLVLA 810 Query: 731 AARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILV 790 + V++ +IDPA +LF+R LV G+ TR AF +NLK+ + E E K RR I+ Sbjct: 811 PKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVA 870 Query: 791 DDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPN 850 D++ +Y RI ++ SA D+WWK + + L++ + ++ +P Sbjct: 871 DEDWQARWYLDRIPAELHSASGLDAWWKSLPPDKRRSLHWSLNDVLPGE--GCEADRFPK 928 Query: 851 FWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSL 910 ++ G+ +L L Y+FEPGA DGVT+ + L LLN ++ + W PG + ALI+SL Sbjct: 929 YFPLGDARLPLHYRFEPGAIDDGVTLDVALHLLNALDPARLSWLAPGFVADKASALIRSL 988 Query: 911 PKPVRRNFVPAPNYAEAFLGRVK-PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHL 969 PK RRN+VPAP++ AF + L R L + TG V D+ + HL Sbjct: 989 PKAQRRNYVPAPDFGRAFYEAFNVASADDIRGELARFLTKATGAHVAALDFDEQALDTHL 1048 Query: 970 KITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESY 1029 + RV DD K L E R L L+ + + +A A + GL + +PE Sbjct: 1049 LMNLRVRDDDGKVLDESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFPTAPIPEQV 1108 Query: 1030 EQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKL 1089 + G V A+PALVD+ D+ A+++F + E +A G+RRLL + + IK ++L Sbjct: 1109 AGEAG---VPAYPALVDQGDNAALRIFADRNEAARAHPRGVRRLLEIALADKIKQARKQL 1165 Query: 1090 PNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTV 1149 P K GL + L D + ++ ++ G + FA + L Sbjct: 1166 PVSPKTGLLYAAIESQERLRGDLVDAALNAVLADGLGAIRDPGAFAQRRDDAIKRLFGEA 1225 Query: 1150 VDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDT 1209 ++ E IL AV + L+ + L D++ Q+ LV+ GF+ L + Sbjct: 1226 MERLTLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPADALANY 1285 Query: 1210 LRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIE 1269 RYL+A+ R E+ DP RD+A+ML+++ A + + ED + +RW +E Sbjct: 1286 PRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAA---HGLQNREDWQALRWDLE 1342 Query: 1270 ELRVSYFAQQLGTPYPISDKRILQAMEQI 1298 ELRVS FAQ+LG +S K++ Q + + Sbjct: 1343 ELRVSVFAQELGAKSGVSAKKLSQRVAAL 1371 >UniRef50_Q9HE06 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 n=1 Tax=Schizosaccharomyces pombe RepID=YK99_SCHPO Length = 647 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 199/654 (30%), Positives = 334/654 (51%), Gaps = 37/654 (5%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-KGL 124 P LP+++ + +L A+ +Q+ IV G TG GKTTQ+P+ E G G+ Sbjct: 14 TNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGI 73 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 IG TQPRRL A++V+ R++ EL + PG GY ++F +VS+ T +K MTDGILL EI Sbjct: 74 IGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFF 133 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 D LL +Y +I+DE HER+L+ D LLG LK +L +R D +++++SA++D + S+ F Sbjct: 134 DPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQD 193 Query: 245 PI--IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGER 301 + + + G+ +PVE + + + + + V ++ GDIL+F+SG + Sbjct: 194 KVCTMSIEGKLFPVETLFLQKPT------ENYVDSAIETVININSTYPPGDILVFLSGRK 247 Query: 302 EIRDTADALNK------LNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAET 353 EI + + + LPL+A L+ EQ RVF R+++ +TN+AET Sbjct: 248 EIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAET 307 Query: 354 SLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS 413 S+T+ GI YV+D G + Y+ T+ +L PIS++SA QR GR GR G RLY+ Sbjct: 308 SITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYT 367 Query: 414 EDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELG 473 E + E + +IL +++ ++L + LGL +I FPF P ++ + L LG Sbjct: 368 EKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLG 427 Query: 474 AITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533 + + PLG Q+S +D +++ +L + + GC E + I S L+ + Sbjct: 428 VLDESGNLTD----PLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYN 483 Query: 534 P-MDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVR 592 P + + H F E D + +N++ +K L + CR +YLNY +R Sbjct: 484 PTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDL------QWCRKNYLNYQTLR 537 Query: 593 EWQDIYTQLRQVVKELGIPVNSE--PAEYREIHIALLTGLLSHIGMKDADKQEYTGARNA 650 + DI T L + + + IP ++ +I LL G + ++ D T Sbjct: 538 QALDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTI-GGK 596 Query: 651 RFSIFPGSGLFKKPPKWVMVAELVET-SRLWGRIAARIDPEWVEPVAQHLIKRT 703 + + S L +K W+M + VE+ ++++ + ++I+ W++ KR Sbjct: 597 QVWLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWLDK----YYKRE 646 >UniRef50_Q87DR2 ATP-dependent helicase n=8 Tax=Xylella fastidiosa RepID=Q87DR2_XYLFT Length = 1478 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 220/688 (31%), Positives = 352/688 (51%), Gaps = 10/688 (1%) Query: 612 VNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVA 671 A Y+ +H ALLTGL IG + +K ++ R RF +FPGS L KKPP WV+ A Sbjct: 799 ERERAAAYQALHRALLTGLPIQIGHRT-EKGDFQAPRQRRFMLFPGSMLAKKPPPWVLAA 857 Query: 672 ELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVA 731 L++T ++WG A I+P+WV HL+ R + PHW R QG V+ +E+++++GL + Sbjct: 858 NLLDTQKVWGLTNAAIEPDWVIAELPHLLMRKHFNPHWSRTQGRVLVSEQISLFGLLLAP 917 Query: 732 ARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVD 791 + ++Y +IDP +LF+R LV G+ TR F +NLK+ + E E K RR I+ D Sbjct: 918 KKPMHYGRIDPVAAHDLFVRQGLVTGEINTRAGFVADNLKVLEQAHEEEAKLRRAGIVAD 977 Query: 792 DETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNF 851 ++ +Y R+ D+ +A DSWWK + E L + L+ + + YP + Sbjct: 978 EDWQARWYFDRVPSDIHTADALDSWWKGLPVEKRHGLYWSLIDLLPGEGGE--EDRYPKY 1035 Query: 852 WHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLP 911 + G+++L L Y F+PGA DGVT+ +PL LLN ++ W +PG + ALI+SLP Sbjct: 1036 FALGDVRLPLHYSFDPGAVDDGVTLEVPLHLLNALDPVRLSWLVPGFVADKAAALIRSLP 1095 Query: 912 KPVRRNFVPAPNYAEAFLGRVK-PLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLK 970 K +RR++VPAP++A AF + P + L R L R+TGV V D+ + +L Sbjct: 1096 KALRRSYVPAPDFARAFAQAFQQPSADEMRGELARFLSRITGVRVAAIDFDEQTLEPYLH 1155 Query: 971 ITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE 1030 + R+ D+ + L E R L+ E A A + L + +P Sbjct: 1156 LRVRLYDESGQVLAESRDFDALRARFGSYSGEAFVARAGRTLIMEELREFPAVSIPLQLT 1215 Query: 1031 QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLP 1090 + G V +PALVD+ + A+++F +P E Q +G+RRLL + + + IK ++LP Sbjct: 1216 GEAG---VPMYPALVDDGEMAALRIFADPTEAAQVHPHGVRRLLEIALANKIKQARKQLP 1272 Query: 1091 NKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVV 1150 +K GL + L DD + ++ ++ + FA + +L + Sbjct: 1273 VSSKSGLLYAAIESKECLRDDLVKAALNAVLAHGLESIRDPVAFAQCRDVAAQQLFSEAM 1332 Query: 1151 DIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTL 1210 E+IL AV + L+ + L D++ Q+ LVY GF+ L Sbjct: 1333 ARLSLAEEILAAVAELKPLLEAPLMGWARGNLDDMERQLAQLVYPGFLRQTPADVLTQYP 1392 Query: 1211 RYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEE 1270 RYL+A+ R E+ DP RD+A+ML+++ A + + + + + +RW +EE Sbjct: 1393 RYLKAMMMRSERAKRDPSRDQARMLELKPFLDALEVAMAQ---GVSDTPGWETLRWDVEE 1449 Query: 1271 LRVSYFAQQLGTPYPISDKRILQAMEQI 1298 LRVS FAQ+LG IS K++ Q + + Sbjct: 1450 LRVSLFAQELGVRSGISVKKLAQRLAAL 1477 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 308/661 (46%), Positives = 419/661 (63%), Gaps = 71/661 (10%) Query: 8 TFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAA 67 ++ +D M RDR R + + +A FQ + + + + +RE Sbjct: 23 QLRQHRRAIDDAMTRDRGRLLGLWSRWQSQPHDHEARANFQRV---LSASRAQRQVRENN 79 Query: 68 RPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGH 127 +P +T LP++Q+ + I+ IR H VVI+AGETGSGKTTQLPK+C+ GRGI G IG Sbjct: 80 QPVVTVDTRLPIAQEAERIVALIRAHPVVIIAGETGSGKTTQLPKLCLSAGRGIAGTIGC 139 Query: 128 TQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRL 187 TQPRR+AAR VA R+AEEL+T G +G++VRF++ VSD + +K MTDGILLAE+ DR Sbjct: 140 TQPRRIAARAVATRVAEELQTPLGMVVGFQVRFTEKVSDASRIKFMTDGILLAEVASDRW 199 Query: 188 LMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII 247 L YDTIIIDEAHERSLNIDFLLGYLK+LL +R DLK+I+TSATID RFS+HF++AP+I Sbjct: 200 LSAYDTIIIDEAHERSLNIDFLLGYLKQLLKKRADLKVIVTSATIDTARFSKHFDDAPVI 259 Query: 248 EVSGRTYPVEVRYRPIVEEA---------------------------------------D 268 V+GRTYPVEVRYRP+ Sbjct: 260 HVAGRTYPVEVRYRPLDAMWASDDRLGEAYGGTESLAVNRWAGGSEGDGALSKPIVALPQ 319 Query: 269 DTERDQLQAIFDAVDELSQESH-GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARL 327 + +R AI +DE+++E GD+L+F+ GEREIR+ L + R TE+LPLYARL Sbjct: 320 EDQRTVNDAIVAVIDEITREDPHGDVLVFLPGEREIRELYRVLERRKYRETELLPLYARL 379 Query: 328 SNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEP 387 S +Q+RVF SGRR+VL TNVAETSLTVP I+YVIDPG AR+ RYS R K+ RL IEP Sbjct: 380 SARDQDRVFNPGSGRRLVLTTNVAETSLTVPRIRYVIDPGYARVKRYSARQKLDRLYIEP 439 Query: 388 ISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGD 447 ISQASANQR GRCGR+++G+C RLYSE+DFL+R FTDPEI R++LA VIL+M LGLG Sbjct: 440 ISQASANQRAGRCGRIADGVCYRLYSEEDFLARSAFTDPEIRRSSLAGVILRMLQLGLGR 499 Query: 448 -----------------------IAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484 I +F F+E PD+R + DG + L ELGA+ + + Sbjct: 500 IGGSAASLSEPVSGPEQQRTSWIIESFSFLEPPDERAVADGWQQLVELGAVDSQ-----H 554 Query: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544 LT +GR++++LPVD + ARM++ A++HGCV E +I + L +QDPRERP + ++A+D Sbjct: 555 VLTAIGREMARLPVDVKSARMLVAARQHGCVHEMTVIAAFLGVQDPRERPPEAREAADNA 614 Query: 545 HRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQV 604 H +F D S+F+ + LW + + ++ + R+ C+ +L +L +REW ++ QL + Sbjct: 615 HAKFADARSEFVGILRLWEAYRQIRGHMTQSKLRQWCQRHFLGFLHMREWCELQLQLSLL 674 Query: 605 V 605 Sbjct: 675 C 675 >UniRef50_A5DZ49 Pre-mRNA splicing factor ATP-dependent RNA helicase PRP2 n=1 Tax=Lodderomyces elongisporus RepID=A5DZ49_LODEL Length = 900 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 201/579 (34%), Positives = 325/579 (56%), Gaps = 35/579 (6%) Query: 53 EIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPK 112 + + + A+ +LPV + + + L I ++QV+IV GETGSGKTTQLP+ Sbjct: 299 DEAERKKQFQRSLEAKEIADVQHSLPVYKFRDEFLRLISENQVLIVVGETGSGKTTQLPQ 358 Query: 113 ICMELGRGIK--GLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMV 170 + G +IG TQPRR+AA +VA R+A+E++ G +GY VRF D S NT + Sbjct: 359 YLYQAGYSQNDTKIIGCTQPRRVAATSVAQRVAQEMQEPLGEKVGYTVRFDDKSSRNTRI 418 Query: 171 KLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP-RRPDLKIIITS 229 K +TDG+LL E + + Y I+IDEAHER+L+ + LL LK+L R DLKIII S Sbjct: 419 KYLTDGMLLREFLNNPEMDSYGAIMIDEAHERTLSTEILLSLLKDLTNSTRSDLKIIIAS 478 Query: 230 ATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQES 289 ATI+ +FS FNNAPI+ + GR +PV++ Y E + LQA+ + ++ Sbjct: 479 ATINATKFSEFFNNAPILNIPGRRFPVKIHY------TKQPEANYLQAVMTTIFQIHLTQ 532 Query: 290 --HGDILIFMSGEREIRDTADALNKLNLR---------HTEILPLYARLSNSEQNRVFQS 338 GDIL+F++G+ EI + + + + +YA L N +Q R+F+ Sbjct: 533 PLPGDILVFLTGQEEIESLEQQMQEAIAKLGDQLKEQGKIMVCSIYANLPNEQQQRIFEP 592 Query: 339 HS--GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 R++VLATN+AETS+T+PG+ YVIDPG + + ++ T ++ L + P S+A+ +QR Sbjct: 593 TPPFTRKLVLATNIAETSITIPGVSYVIDPGYVKQTEFNPHTGMESLLVVPCSKANCDQR 652 Query: 397 KGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 GR GR+ G C R++++ F T PEI R NL SV+L + +LG+ D+ FPF++ Sbjct: 653 AGRAGRIGPGKCFRIFTKHSFDHEMEMNTKPEIERINLNSVVLLLLSLGINDLIKFPFLD 712 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 P++++I + LL +LG + + +LT G ++S+ P+DP A+ +L +++ G Sbjct: 713 PPNRQSIIKSLSLLYQLGGLNS-----RGELTRTGMKMSEFPLDPTYAKCILSSERFGIT 767 Query: 516 REAMIITSALSIQDPRERPMDK--QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALS 573 +E II + L+ K ++ ++H +F DK+ D L +N++ A + Sbjct: 768 KEICIIIAMLTESSNLYYIPKKLDKEMVKKRHEQFVDKQGDHLTLLNVYKQW-----AGT 822 Query: 574 SNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV 612 + C+ ++ Y ++ +DIY QL + ++GI V Sbjct: 823 GGYSNQWCQDYFIQYKTMKRVRDIYKQLIGICLKVGITV 861 >UniRef50_Q8SQQ2 PRE-mRNA SPLICING FACTOR (DEAD box family) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQQ2_ENCCU Length = 784 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 205/644 (31%), Positives = 335/644 (52%), Gaps = 46/644 (7%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 LP+ + D++E + H+V+++ GETGSGK+TQ+PK + G G KG+IG TQPR Sbjct: 101 EVSQRLPIESFRDDLMEFVGKHRVIVLVGETGSGKSTQVPKYLYQEGYGDKGIIGCTQPR 160 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQY 191 R AA ++A+ + E+ +GY +RF + +T ++ MT+GILL E+ D++L +Y Sbjct: 161 RAAAISLASTLKREMGCA----VGYSIRFDSTTTQDTKIRYMTEGILLQELLADKMLRRY 216 Query: 192 DTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSG 251 +I+DEAHER+ N+D +G LK L R DL+III SATI+ ++ +F P + G Sbjct: 217 SVVILDEAHERTTNLDISMGLLKLALKERDDLRIIIMSATIEAQKLCNYFG-CPAFNIEG 275 Query: 252 RTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADAL 310 R+YPVE RY + D ++ + + + GDIL+F++G ++ + Sbjct: 276 RSYPVETRYLSV------NVDDYVEWTVKKILYIHENCGEGDILVFVTGRDDVEGVVGIV 329 Query: 311 N-----------KLNLRHTEILPLYARLSNSEQNRVFQS-HSGRRIVLATNVAETSLTVP 358 N R ++LP Y++L QNRVFQ+ R+ +++TNVAETSLT+P Sbjct: 330 NHCIRNKCFGEGSEGGRGLKVLPFYSQLPEEMQNRVFQAEKDVRKCIVSTNVAETSLTIP 389 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 I YVID G +IS YSY T + L PIS+A+A+QR GR GR G+C R+Y+ D + Sbjct: 390 NIGYVIDTGLQKISVYSYDTG-ESLVTVPISRANADQRTGRAGRTRPGVCYRMYTADTYE 448 Query: 419 S-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITT 477 + PEI RTN+ +V+L + G+ DI F FV+ P + IQ + L LGA+ Sbjct: 449 NDMLPSPVPEIQRTNIHNVVLLLLKHGVHDILGFDFVDRPSEELIQGALLGLHRLGAV-- 506 Query: 478 DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDK 537 S LT +G+++S+L +DP LARMVL A +G V E I S LS+ + R DK Sbjct: 507 ---CSRGLLTKVGKEMSELRLDPPLARMVLGAAGYGAVNEIASIASMLSVHEVFHRDFDK 563 Query: 538 QQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDI 597 + DFL +N++N Q+ C ++ ++ + Sbjct: 564 SS-------PLCHQGCDFLTLLNIFNAFIRQKN------RSEWCNKMKVSEHALKRATET 610 Query: 598 YTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPG 657 + ++E+G+P++S + +I +++ + ++ + K + + P Sbjct: 611 KRAVLMSLREMGVPISSTRS-LDKIQRCIISSVHYNVARRR-GKGYVCLSNFRACMVHPS 668 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701 S L ++++ + + T + + I P+ + A + Sbjct: 669 SVLADSYSQYIIFYKHLSTRAEYMYCCSNISPQVILEEAGCYYR 712 >UniRef50_B6H9G3 Pc16g10890 protein n=15 Tax=Leotiomyceta RepID=B6H9G3_PENCW Length = 809 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 209/733 (28%), Positives = 349/733 (47%), Gaps = 94/733 (12%) Query: 40 PDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA 99 P A+ + D + LRE A+ + LPV + I + +R+ V+++ Sbjct: 87 PAAKPYAKSKSKPFTDTKTNFIPLREKAKALLETRRKLPVFENADLIRDLLREQDVMLLV 146 Query: 100 GETGSGKTTQLPKICMELGRGI-----------------KGLIGHTQPRRLAARTVANRI 142 GETGSGK+TQ+P+ ++ G I TQPRR+AA ++A R+ Sbjct: 147 GETGSGKSTQIPQFLVDEFWCRPVPTQVTRDGKTEKKVVGGCIAITQPRRVAAISLARRV 206 Query: 143 AEELKTEPGG-----CIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIID 197 AEE+ T G +GY VRF S +T VK +T+G+LL E+ D L +Y I++D Sbjct: 207 AEEMGTPLGSHSPASKVGYSVRFDTSTSPSTRVKFLTEGMLLQEMLHDPNLTKYSAIVVD 266 Query: 198 EAHERSLNIDFLLGYLKELLPRRP------DLKIIITSATIDPERFSRHFN-------NA 244 E HER +N+D LG+L+ L+ LK+++ SAT D E + F A Sbjct: 267 EVHERGINVDLTLGFLRNLVSGNKEGRGGVPLKVVVMSATADMESLTDFFKQGFKQTEPA 326 Query: 245 P----------------------IIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAV 282 P + + GR +PV+ Y P D + A + Sbjct: 327 PKAIQAAEDEADKMDTSTPKDISVCHIKGRQFPVKTIYSPA------PVHDFVDAALKVI 380 Query: 283 DELSQESH--GDILIFMSGEREIRDTADALNKLNL------RHTEILPLYARLSNSEQNR 334 ++ Q+ GDIL+F++G+ + +N+ + +LPL+A L + Q R Sbjct: 381 FQIHQKEPMPGDILVFLTGQETVEALEHLVNEYAMGMDPSLPKILVLPLFAALPQAAQQR 440 Query: 335 VFQSHSGR--RIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS 392 VF R +IVL+TN+AETS+TV G+++V+D G A++ ++ R + L ++PIS+++ Sbjct: 441 VFAPAPPRTRKIVLSTNIAETSVTVSGVRHVVDCGKAKVKQFRTRLGLDSLLVKPISKSA 500 Query: 393 ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFP 452 A QRKGR GR + G C RLY+E D+L+ E PEILR +L+ +L M A G+ DI FP Sbjct: 501 AIQRKGRAGREAPGQCFRLYTEKDYLALDETNTPEILRCDLSQALLNMKARGVDDIVGFP 560 Query: 453 FVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKH 512 F+ P + ++ + L + A+ D K++P+G +++LP+ P L R++L A +H Sbjct: 561 FLTRPPREALEKALLQLLNINALEDDG-----KISPVGLHIAKLPLTPTLGRVLLAAAEH 615 Query: 513 G--CVREAMIITSALSIQDPRER--PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ 568 G C+ + + I S LS+++ +K++A++ R + +E D L + + Sbjct: 616 GSECLLDVIDIISCLSVENIFLNTTSEEKKEAAEAARRDLYRREGDHLTMLTTVRVYAAE 675 Query: 569 QKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNS-------EPAEYRE 621 Q + +++ ++ D+ QLR ++ + N Sbjct: 676 QADR-----KAWAERHLVSHRAMQSVMDVRKQLRTQCRQAKLLTNEALNNTSLHDPSPIL 730 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWG 681 I + L G ++ D T N +I P S L+ K + +M E V T+R + Sbjct: 731 ILQSFLAGFATNTARLVPDGSYRTIVGNQTVAIHPSSVLYGKKLEAIMYNEFVFTNRSYA 790 Query: 682 RIAARIDPEWVEP 694 R + + +WV Sbjct: 791 RGVSAVQMDWVGE 803 >UniRef50_Q4N5J8 RNA helicase, putative n=1 Tax=Theileria parva RepID=Q4N5J8_THEPA Length = 619 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 194/602 (32%), Positives = 311/602 (51%), Gaps = 32/602 (5%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 ++LP++ K I E I+++Q +I+ G TGSGK+T +P K + TQPRR+A Sbjct: 4 ESLPINLVKDLIFEKIKENQCLILVGSTGSGKSTSVPLWLYTSFTNPKQKLVVTQPRRVA 63 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A ++A +A TE G +G+ VRF + +++T +K +TDGIL+ E D LL +Y + Sbjct: 64 AISLAKYVANLTNTELGTTVGFNVRFLNKSNESTRIKYVTDGILMRESISDPLLSKYSIV 123 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 IIDE HERS+ D LLG +K L +RP+LK+I+ SATID F+ F N+ I V GR + Sbjct: 124 IIDEVHERSIRSDILLGIIKLALTKRPELKLIVMSATIDSNVFNEFFQNSFTINVPGRLF 183 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFMSGEREIRDTADALNKL 313 PV++ Y P D ++A +V ++ GDIL+F+ G+ +I L + Sbjct: 184 PVDIYYTPA------PFEDYIEAAMISVLQINLSTETGDILVFLPGQEDIEILERLLKQK 237 Query: 314 ------NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVID 365 ++ I PLY+ LS QN VF+ R++VLATN+AETSLT+PGIKYVID Sbjct: 238 VKHLNDSMESLVICPLYSALSLERQNLVFKTTPPKSRKVVLATNIAETSLTIPGIKYVID 297 Query: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD 425 G + +Y+ + + L + S++SA QR GR GR G RLY+ D + P+ T Sbjct: 298 TGLVKQRKYNPKNNFESLTVNITSKSSAKQRAGRAGREGPGEIYRLYTLDSYEKMPQNTT 357 Query: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485 PEI + + V LQ+ +G+ DI FPF++ PDK I L LGA+ ++ Sbjct: 358 PEIHLIDFSFVFLQLKMIGVKDIFEFPFIDPPDKGTILSAALNLYRLGALDSEGN----- 412 Query: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545 LT G+ ++Q+P+ P +++++ + + C E + I S LS + + Sbjct: 413 LTEAGKMMAQIPLLPMHSKLLISSFEFSCTSEILTIVSILSSEIALFDTEKFNPEGVKLR 472 Query: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605 ++K D L +N++N ++N+ C+ +N +DI QL ++ Sbjct: 473 SNLYNKYGDHLTLLNIYNLWE------NANSRETFCKQFAVNNHAFNRAKDIRNQLVSII 526 Query: 606 --KELGIPVNSEPAE---YREIHIALLTGLLSHIGMKDADKQEY-TGARNARFSIFPGSG 659 ++ G+ S+ + + ++ L G ++ + + Y T N I P S Sbjct: 527 TSEQFGVKNISKLTDSSSWDQVRKCLTKGNWTNSAKFCPETKSYNTLVNNQCVYIHPSSI 586 Query: 660 LF 661 Sbjct: 587 CC 588 >UniRef50_A0E003 Chromosome undetermined scaffold_70, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0E003_PARTE Length = 616 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 206/632 (32%), Positives = 334/632 (52%), Gaps = 34/632 (5%) Query: 72 TYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPR 131 + LP+ Q ++ I+++IRD+QV+I+AGETG GKTTQ+P+ E I TQPR Sbjct: 4 EFRTQLPIFQFREKIIKSIRDNQVIIIAGETGCGKTTQIPQYIYE--NDPNVKIAVTQPR 61 Query: 132 RLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ-------Q 184 RLAA T+A R + E +T+ G IGY VRF D S T + +TDG+L+ E + Sbjct: 62 RLAAMTLAERCSLEKQTKLGQLIGYNVRFDDCTSKETQITFLTDGMLIREFIIGIFVDYK 121 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNA 244 D+ L +YD IIIDEAHER++ D LLG LK L RR LK+I+ SAT+ E+F+ + Sbjct: 122 DQQLKRYDVIIIDEAHERTVQSDLLLGLLKNLCRRRKQLKVILMSATMQIEKFANYLETE 181 Query: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREI 303 I + RT+ V+V PI ++ D ++++ + + +L + GDIL F++G+ +I Sbjct: 182 AIHIIEARTHTVDVFNVPIRQQ------DYVESMVNTILQLHFTQPEGDILAFLTGQEDI 235 Query: 304 RDTADALNKLNL-----RHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVP 358 D + L + + ++ LY+ L Q FQ R++VLATN+AETS+T+ Sbjct: 236 EDVKEILIERMKISNQEKQLDVKMLYSALPPEVQLEAFQKSVHRKVVLATNIAETSITID 295 Query: 359 GIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFL 418 GI YV+D G +I + + L + P+S+A A QR GR GR +G C RLY++ + Sbjct: 296 GIVYVVDCGYVKIRSFQIGKAIDTLLLAPVSKAQAEQRAGRAGRQRQGQCYRLYTQQTYE 355 Query: 419 SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTD 478 ++ PEILR NL SVILQM A+G+ ++ F ++ PD + + L +L A+ ++ Sbjct: 356 RLAKYMLPEILRVNLLSVILQMKAIGIQNVLTFDLIDRPDMELMLANLNQLVKLKALDSE 415 Query: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538 + LT G+ +S LP++P+ + +++A + G A+ S L +++ + Sbjct: 416 -----FNLTEHGKNMSSLPLEPQFSHFLIKAYECGIFDLALNSISILQVENLFYFQRGTK 470 Query: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598 ++ + +F SD L N+ E Q S C+ + LN+ +++ + Sbjct: 471 ESMQKILAKFKIANSDHLTKANILRKYEETQNKKS------FCKENCLNHKTLQKAMSVK 524 Query: 599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDA-DKQEYTGARNARFSIFPG 657 QL+ +K + I E +Y + L L+ + D+ N I P Sbjct: 525 QQLKDYMKRI-IKKEFEKEDYDKFKQVLSEALMFKHAVYSPSDQAYKLKQTNQLAYIHPE 583 Query: 658 SGLFKKPPKWVMVAELVETSRLWGRIAARIDP 689 S LF + PK+V+ E++ T +++ R ID Sbjct: 584 SVLFNQKPKYVIYNEVILTKKVYLRDVTEIDE 615 >UniRef50_B7FZA2 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FZA2_PHATR Length = 665 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 215/674 (31%), Positives = 332/674 (49%), Gaps = 44/674 (6%) Query: 55 DQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC 114 + A K ++ + NLPV + ++L AIR ++V+V TGSGK+TQ+P Sbjct: 6 ETAKKKRHRSDSIDSLANFRQNLPVYAYRTELLRAIRSPKIVLVTASTGSGKSTQIPAYL 65 Query: 115 MELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMT 174 ++ + ++ TQPRR+AA T+A R+A E + G IGY+VRF D +T + +T Sbjct: 66 ID----SEHVMAVTQPRRVAATTLAQRVAHEHQGIVGHQIGYRVRFDDCTRSDTQLTYVT 121 Query: 175 DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP------RRPDLKIIIT 228 DG+LL E D LL +Y I +DEAHERSL D LLG ++ R L+I++ Sbjct: 122 DGMLLREAMVDPLLRKYSIIFLDEAHERSLQTDILLGVVQRARKSRQQSYSRRPLQIVVM 181 Query: 229 SATIDPERFSRHFNNAPI--IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS 286 SAT+ + F F + IE+ GR +PV++ Y + D ++A + ++ Sbjct: 182 SATLQVQTFEDFFGKENVVRIEIPGRQFPVQMLYTSV------PAEDYMEATLATILQIH 235 Query: 287 Q-ESHGDILIFMSGEREIRDTADALN-----KLNLRHTEILPLYARLSNSEQNRVFQSHS 340 E GD+L+F+ G+ EI D A L +L I LYA L Q F Sbjct: 236 THEEAGDVLVFLPGQEEIEDLATLLRGNTVSQLLANGVLICLLYAALPPEAQLAAFAEKP 295 Query: 341 ---GRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 R+I+LATN+AETS+T+P I+YV+D G ++ + T + L +E +SQA A QR Sbjct: 296 EGCRRKIILATNIAETSVTLPAIRYVVDTGKHKLRQI-LATGMDSLTVESVSQAQAAQRA 354 Query: 398 GRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 GR GR+ G+C RLY+ED F + PEILR LA VILQ+ +G+ D F FV P Sbjct: 355 GRAGRIGPGLCFRLYTEDAFERLDPDSLPEILRVGLAQVILQLKGMGVQDPTTFDFVTPP 414 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 D ++ +LL LGA+ A +LT G++L++LP+DP ++L++ ++ C E Sbjct: 415 DTSSLVRAAKLLYALGAVND-----AMELTDYGKKLAKLPLDPVFGHLLLKSAEYSCTSE 469 Query: 518 AMIITSALSIQDPRERPM--DKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN 575 + + LS ++ RP + + HRRF E D F+N++ + S Sbjct: 470 MLTAVAVLSAENVFYRPTTGEVIAKAAAAHRRFASHEGDLPTFLNVYQAWEREASYHSRV 529 Query: 576 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE------LGIPVN-SEPAEYREIHIALLT 628 C+ ++++ + + QLR LG+ VN + + Sbjct: 530 LHGEWCQRNFVSGRSLGRAYHVRQQLRSTCLRPAEKNGLGMDVNVTCGKDRESFLKCAAA 589 Query: 629 GLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK--PPKWVMVAELVETSRLWGRIAAR 686 GL + + + E N SI P S +F + P V+ ELV T + + R + Sbjct: 590 GLFLQVASRTKAETEIDSRGNETVSIHPTSTMFGRHPAPACVVFTELVTTKKTYIRGVTQ 649 Query: 687 IDPEWVEPVAQHLI 700 I EW+ VA Sbjct: 650 IREEWLHEVAPVFY 663 >UniRef50_B6K0W8 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K0W8_SCHJY Length = 653 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 198/649 (30%), Positives = 324/649 (49%), Gaps = 39/649 (6%) Query: 66 AARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL- 124 + + LP+++ ++++L I +HQV +V G TG GK+TQL + E G G Sbjct: 14 SNLSIKRIRELLPIARFRRELLYLIENHQVTVVIGSTGCGKSTQLTQYLYESGWAESGKC 73 Query: 125 IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQ 184 I T+PR++ +++A R+AEE+ G GY + F S T VK +TDG+LL E+ Sbjct: 74 IACTEPRKVVVKSLAQRVAEEMGCTLGEECGYGMSFESCTSKTTKVKYITDGLLLQEMFI 133 Query: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN-- 242 D LL QY I++DE HER++ D LL LK++L +R DL+II+ SAT+D E+ +F Sbjct: 134 DPLLTQYSVIMLDEVHERTIATDLLLCLLKKILKQRSDLRIIVASATLDAEKLEEYFKVD 193 Query: 243 --NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGD--ILIFMS 298 + + R +PV+V Y + L+ + +++ + D IL+F+S Sbjct: 194 QLSCTTFHLESRLFPVDVFYLSTPT------ENYLENAIEVCSSINKTAPADDDILVFLS 247 Query: 299 GEREIRDTADALNKLNLRH------TEILPLYARLSNSEQNRVFQS--HSGRRIVLATNV 350 G EI + L +LR+ LPLY+ L+ EQ RVFQ R++V ATN+ Sbjct: 248 GRAEIDECVKRLETASLRNIGSAPQMVALPLYSGLTLDEQMRVFQKVEQGSRKVVFATNI 307 Query: 351 AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIR 410 AE S++V GI YVID G ++ Y+ + L ISQASA+QR GR GR G C R Sbjct: 308 AEASISVEGITYVIDCGYEKVRVYNPYNRSTALVKTSISQASADQRAGRAGRTKPGKCFR 367 Query: 411 LYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLE 470 LY+E F + + PE+ ++L +L + A+G+ +I F++ P + L Sbjct: 368 LYTEAAFSALKAKSSPELTHSDLIQPLLFLKAMGIKNIVNLSFLDNPPTVQFMAALEELY 427 Query: 471 ELGAITTDEQASAYKLT-PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529 LGA+ LT PLG +++ P+ PRL++ +L A K GCV+E + I S L+I Sbjct: 428 FLGALDE-----MGHLTRPLGYSMAEFPLHPRLSKTLLTAAKFGCVQEVLNICSILTITT 482 Query: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYL 589 + + +F +E D L +N ++ +Q++ R C LN Sbjct: 483 NLFIKRSSAEYFNSF-YKFAVEEGDLLTQLNAFHAYLKQKRE------SRWCSNHCLNAQ 535 Query: 590 RVREWQDIYTQLRQVVKELGIPVNS-EPAEYREIHIALLTGLLSHIGMKDADKQEYTGAR 648 + + + + +L+Q +++ G+ S +P + I L S++ + + T Sbjct: 536 SLLQAEQVQQRLQQYLRKFGVYATSRKPTDKTNILKCFLASHYSYVAKRQRNGSYKT-PE 594 Query: 649 NARFSIFPGSGLFKKPPKWVMVAELVET--SRLWGRIAARIDPEWVEPV 695 I S L ++ P W+M E ET + + ++ + I+ W+ Sbjct: 595 GLNVYIDKDSVLHEQTPTWIMYYE-AETIGEKTYAKVVSVIEGAWLRDY 642 >UniRef50_D2A3P7 Putative uncharacterized protein GLEAN_15731 n=1 Tax=Tribolium castaneum RepID=D2A3P7_TRICA Length = 1068 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 231/899 (25%), Positives = 373/899 (41%), Gaps = 122/899 (13%) Query: 37 VKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVV 96 +KN + K + + LP+ ++Q I+E I ++ VV Sbjct: 203 IKNEPKETKTKTPTRKVLAPKPAVFVDVIRDEEIQNSRLKLPILAEEQQIMETINENPVV 262 Query: 97 IVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY 156 I+AGETGSGKTTQ+P+ E G +K I T+PRR+AA ++ R+A+E+ + Y Sbjct: 263 IIAGETGSGKTTQVPQFLYEAGYALKKQIAVTEPRRVAAIAMSKRVAQEMNLSS-NEVSY 321 Query: 157 KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216 +RF + +++T +K MTDG+LL E+Q D LL QY +I+DEAHERS+ D L+G L + Sbjct: 322 LIRFEGNATEDTKIKFMTDGVLLKEVQNDFLLSQYSVVILDEAHERSVYTDILIGLLSRI 381 Query: 217 LPRR----PDLKIIITSATIDPERFSR----HFNNAPIIEVSGRTYPVEVRYRPIVEEAD 268 +P R LK+II SAT+ E F++ P+I V R +PV V + Sbjct: 382 VPLRVKRGDPLKLIIMSATLRVEDFTKNKRLFKKTPPVINVDSRQFPVTVHF------NK 435 Query: 269 DTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADALNKLNL------------ 315 T D L F V ++ + G +L+F++G++E+ L Sbjct: 436 RTNEDYLSESFTKVVKIHTKLPEGGVLVFVTGQQEVNSLVKKLRAKFPFKVKLNEEAEPT 495 Query: 316 -------------------------------------RHTEILPLYARLSNSEQNRVFQ- 337 +LPLY+ L +QNRVFQ Sbjct: 496 KLKQKKVYAPEVNLDDYDPDWSSESEEEESERPLYHAPPLWVLPLYSMLPTHKQNRVFQA 555 Query: 338 -SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 R V++TNVAETSLT+P IKYV+D G ++ Y T V + S+ASANQR Sbjct: 556 PPPGCRLCVVSTNVAETSLTIPNIKYVVDSGRTKVKLYDKITGVSSYVVTWTSKASANQR 615 Query: 397 KGRCGRVSEGICIRLYSEDDFL-SRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVE 455 GR GR G C RLYS F + +F PEI + + + LQM + + + FPF Sbjct: 616 AGRAGRTGPGHCYRLYSSAVFNDTLHDFCVPEIQQKPVDDLYLQMKCMSIDKVVNFPFPT 675 Query: 456 APDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCV 515 APD ++ LE LGA+ ++TPLGR +++ PV PR +M+ + + + Sbjct: 676 APDLLQLKTAEHRLEILGALQNS------QVTPLGRAIAKFPVLPRFGKMLALSHQQDLL 729 Query: 516 REAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKE----SDFLAFVNLWNYLGEQQKA 571 + + +ALS+Q+ D + + + + D + + A Sbjct: 730 PYTICMVAALSVQEVLL---DDAKWAALRRQWAATGNSLLLGDSMVLLRAVGAAE---FA 783 Query: 572 LSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN---------SEPAEYREI 622 + N + C + L + V E + + QL +K + + + + Sbjct: 784 NTQNRLEQFCHANGLRHKAVLEIRKLRLQLTNEIKANVPEADVVVDPALAPPTDLQAKLL 843 Query: 623 HIALLTGLLSHIGMKDADK------QEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET 676 LL G+ I K + + GS L K P++V+ E+ ET Sbjct: 844 RQILLAGMGDQIAKKIESEDKKFKYGYQANNMEDPVFLHSGSVLRKNLPEFVIYHEIYET 903 Query: 677 SRLWGRIAARIDPEWVEPVAQHLIKRTYS--EPHWERAQGAVMATEKVTVY--GLPIVAA 732 ++++ R I+PEW+ L + EP G V T T G + Sbjct: 904 NKIYMRGVTAIEPEWLPVYVPSLCNLSEPLAEPEPRLKNGKVYCTVNGTFGSQGWTL-PN 962 Query: 733 RKVNYSQ-IDPALCRELFIRHALVEGDWQTRHAFFRENLK-LRAEVEELEHKSRRRDILV 790 ++ Y + I+ F+ LV + + +L+ ++ Sbjct: 963 VEIEYPRTINYYKWFGRFLLEGLVFKKLEKYKDVLLSQPAIMVKSWAKLQPRTD------ 1016 Query: 791 DDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYP 849 +S + +S + W +TP L E + + A + +P Sbjct: 1017 ------AILKALLSKEAVSKQRLAEIW----TDTPKFLLEEFLRWVPQSAYGEVSMMWP 1065 >UniRef50_B2S1H1 ATP-dependent protease La n=22 Tax=Borrelia RepID=B2S1H1_BORHD Length = 828 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 216/625 (34%), Positives = 356/625 (56%), Gaps = 20/625 (3%) Query: 77 LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136 LP+ + K ++++ +R + V+IV TGSGKTTQ+P+I E G G IG TQPRR+A Sbjct: 6 LPIYKYKDELIKKLRTNNVLIVESPTGSGKTTQIPRIIYEAGLAKLGKIGVTQPRRIATI 65 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196 ++A IA+ + G +GYK+RF + S T +KLMTDG+LL E+++D LL +YD III Sbjct: 66 SIAEYIAKHIGVNLGEEVGYKIRFQEITSPKTKIKLMTDGVLLQELKKDTLLYEYDVIII 125 Query: 197 DEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPV 256 DEAHERSLNIDF+LG +K++L +R D K+II+SATI+ + FS++FNNAPI+ + TYPV Sbjct: 126 DEAHERSLNIDFILGLIKDILKKRNDFKVIISSATINTKVFSKYFNNAPILNIETITYPV 185 Query: 257 EVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLR 316 ++ Y P + + +++ I + + ++ GDILIF+SGE+EI++T A+ +LN + Sbjct: 186 QIIYNPPLLNTSKSMILKIKEIISGI--IKEKKEGDILIFLSGEKEIKETIKAIYELNSK 243 Query: 317 -HTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 ILPLY R++ Q ++F + R+I+++TN+AETS+T+ IK VID G + ++ Sbjct: 244 QDLVILPLYGRMAKEAQEQIFMPTPKNKRKIIVSTNIAETSITIENIKIVIDSGKVKTNK 303 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 + +T L PIS++SA QR GR GR+S+G C RLY D++ R E+ EI RT+L Sbjct: 304 FQMKTHTYSLQEVPISKSSATQRAGRAGRLSKGTCYRLYKRDEYQLRDEYQKEEIYRTDL 363 Query: 434 ASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQL 493 + VIL+M +G+ + F F+ P ++IQ +L+ L AI + LT +G+ + Sbjct: 364 SEVILRMADIGIRNFTKFDFISKPSIKSIQTASDILKSLDAINEKNE-----LTEIGKYM 418 Query: 494 SQLPVDPRLARMVLEAQK--HGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDK 551 P+ P +R ++EA + I S LS P +++ + + H ++ + Sbjct: 419 IIFPLIPIHSRALVEAMINYQKAIYPTTIGLSFLSTSGVFLLPQNEEIEARQAHLKYKNP 478 Query: 552 ESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIP 611 D + F+N++ + + +YL+ + E ++ QL +V IP Sbjct: 479 LGDLIGFINIFEDYKKAINK------EDFAKENYLDLQGLEEITNVQRQLENIVSSFNIP 532 Query: 612 V-NSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMV 670 + ++ + +++ G+ +I K + T I PGS + K+ + Sbjct: 533 IVHTHEIDQEGYLKSIMRGMKDYICFKSLKNKYKTIK-AQNVVIHPGSLINTDSVKYFVA 591 Query: 671 AELVETSRLWGRIAARIDPEWVEPV 695 E++ETS+ + R + EW+ + Sbjct: 592 GEIIETSKRYARSIGVLKKEWINDI 616 >UniRef50_Q16ZW5 ATP-dependent RNA helicase n=11 Tax=Eukaryota RepID=Q16ZW5_AEDAE Length = 1246 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 203/664 (30%), Positives = 336/664 (50%), Gaps = 41/664 (6%) Query: 4 QQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQ------A 57 ++ L + + ++++ D I ++ K+ Q Sbjct: 173 APRVVDEPLPTQYEKAFCSGIRISVPFEELYSRLQHFDQSGRITEQKLKQFLQIVVHYLD 232 Query: 58 AGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL 117 + R NLPV+ + +I+ A+++ Q+VI+AG+TG GK+TQ+P+ Sbjct: 233 FRQKERFNKLRKLRKAQANLPVASHRDEIVAAVKNEQIVILAGDTGCGKSTQVPQYLYHA 292 Query: 118 GRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGI 177 G I TQPRR+A +++ R+A E+ E G +GY++RF S T + +T+G+ Sbjct: 293 GYE---KIACTQPRRIACISLSKRVAHEMLCEYGTQVGYQIRFERSKSTQTNILFITEGL 349 Query: 178 LLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF 237 LL ++ + L QY II+DE HER L+ DFLLG K L+ +PD+K+++ SATI+ + F Sbjct: 350 LLRQLSAEENLSQYSVIILDEVHERHLHGDFLLGITKCLMRAKPDIKLVLMSATINIKLF 409 Query: 238 SRHF--NNAPIIEVSGRTYPVEVRYRPIVEE-------------ADDTERDQLQAIFDAV 282 +F A IIEV GR +P+++ Y P +++ +D + I + Sbjct: 410 GDYFAEEKAQIIEVPGRLFPIKLHYMPQIQDVPTTSSGKSKQKTSDRISPEPYIQILQLI 469 Query: 283 DELSQE-SHGDILIFMSGEREIRDTADALNK--LNLRHTEILPLYARLSNSEQNRVFQ-- 337 D+ GD+LIF+SG EI DA + ++ ILPL++ LS +EQ++VF Sbjct: 470 DQKYPPTEKGDVLIFLSGLNEITSIVDAAKEYAEKNKNWIILPLHSTLSIAEQDKVFDYP 529 Query: 338 SHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRK 397 R+ +++TN+AETS+T+ GI++VID G + Y TK+QRL IS+ASA QRK Sbjct: 530 PDGIRKCIISTNIAETSVTIDGIRFVIDSGKVKEMSYDATTKMQRLKEFWISKASAEQRK 589 Query: 398 GRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAP 457 GR GR GIC RLYSE F +T EIL+ L S++LQM ++GL + FPF+E+P Sbjct: 590 GRAGRTGPGICYRLYSEKQFYDFESYTTAEILKVPLESLLLQMISMGLPNARMFPFIESP 649 Query: 458 DKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVRE 517 NI++ + L+ A+T DE KLTPLG+ L+++PVD + +M+L ++ Sbjct: 650 PAENIENAIMNLKHHEALTVDE-----KLTPLGKALARIPVDIGIGKMLLMGCVFQQLQP 704 Query: 518 AMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQ-------QK 570 + + + LS+Q P ++ + + F D + +N + E ++ Sbjct: 705 VLTLAATLSVQSPFTNRAYREPECERARKSFESDHGDPITLLNAYKEWLELKQNRFEYRR 764 Query: 571 ALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGL 630 + + CR L R E + Q + ++++ G+ N+ A+ G Sbjct: 765 DEHRESSKSWCRRRGLEEQRFYEITKLRRQFQDLLQDCGLMENANSDSMTSAERAIRHGE 824 Query: 631 LSHI 634 L + Sbjct: 825 LKQL 828 >UniRef50_Q5KNB9 ATP-dependent RNA helicase prh1, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KNB9_CRYNE Length = 814 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 217/757 (28%), Positives = 355/757 (46%), Gaps = 104/757 (13%) Query: 31 LHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAI 90 ++GV K+P ++ + G R A + LP Q ++ ILE I Sbjct: 51 VNGVYSPKSPKKRKIGQANGDLGKGKKDGAEARRREAERLLVKRKELPFYQGRRMILEEI 110 Query: 91 RDHQVVIVAGETGSGKTTQLPKIC------------MELGRGIKGLIGHTQPRRLAARTV 138 + I+ GETG GK+TQLP++ R I TQPRRL A + Sbjct: 111 MANDTTIILGETGCGKSTQLPQLLRTHPVSVNHFSPSSSNRFRGPSIAITQPRRLPAIAL 170 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQ-QDR----------- 186 ANR+++E+ + GG +GY VRF D S T V+ +T+G+L+ E+ D Sbjct: 171 ANRVSQEMGCQIGGEVGYSVRFEDVTSRETRVRYLTEGVLMRELAGSDPKICPPEKGANG 230 Query: 187 -------------------LLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDL---- 223 LL+ YD +IIDEAHER+LN DFL G LK + R D+ Sbjct: 231 TANGEDENDSHMSEGQGLNLLLNYDVVIIDEAHERTLNTDFLCGALKRVQRIRKDIARRQ 290 Query: 224 ---------KI-----------IITSATIDPERFSRHFN-NAPIIEVSGRTYPVEVRYRP 262 KI +I SAT+DP +F F + V GR Y V ++ Sbjct: 291 AEEEFQGKEKIPGKKKVKELKLVIMSATLDPTKFKTFFGTGRDALLVKGRMYEVATQH-- 348 Query: 263 IVEEADDTERDQLQAIFDAVDELSQES--HGDILIFMSGEREIRDTADALNKLN------ 314 + D ++A V + GD+L+FM G EI + + L +++ Sbjct: 349 ----VLEPVDDFIEAAARQVMTIHCSPDSPGDVLVFMPGSEEIENCVELLKRVSKQLAPG 404 Query: 315 LRHTEILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARIS 372 ++LPLYA L + Q+++F + RR+++ATN+AETS+T+PG+ +V+D G + Sbjct: 405 SPALQVLPLYAALPPTAQSKIFIPTPDNTRRVIVATNIAETSMTIPGVAFVVDSGFKKEK 464 Query: 373 RYSYRTK--VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR 430 Y +R ++ L + IS+ASA QR GR GR G C RL+++D F PEF PEI R Sbjct: 465 EYVFRNAGALEHLRKKGISKASAWQRTGRAGRERAGHCYRLFTQDFFDKMPEFDAPEIQR 524 Query: 431 TNLASVILQMTALGLGDIAAFPFVEAP---DKRNIQDGVRLLEELGAITTDEQASAYKLT 487 NL+S +LQ+ A+G + F +++ P + + L L A+++ +T Sbjct: 525 CNLSSAVLQLIAMG-QNPFEFEYIDNPGRDSTNTVLAAFQELVGLSALSS-----PTTIT 578 Query: 488 PLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSI-QDPRERPMDKQQASDEKHR 546 PLG Q+ + P+DP AR++L A ++GC E + I S ++ + + ++ + + + Sbjct: 579 PLGLQMLRFPLDPPHARILLAAFEYGCANEIIDIISLVNAGGNVFIDRPNDREEAAQARQ 638 Query: 547 RFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR-------LCRTDYLNYLRVREWQDIYT 599 +F +E D L +N++ E +++ SS+ C+ +++N + + + Sbjct: 639 KFIHREGDHLTMMNVFRAYTELKESKSSSHSNSSSQSLVGWCKDNHVNSKTLAQALKVRE 698 Query: 600 QLRQVVKELGIPVN-SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGS 658 QLR++ + LG S +E+ + +LL GL + + AD A + I P S Sbjct: 699 QLRELSERLGKDWKASCGSEWGMVGRSLLQGLFMNTAVIQADGSYRQTAGSLTVKIHPSS 758 Query: 659 GLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 695 L K ++ EL T+ + R + + W+ V Sbjct: 759 VLMSKKVPAILYDELTITTAFYARNVSAFEQHWLTEV 795 >UniRef50_A0CTF1 Chromosome undetermined scaffold_27, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0CTF1_PARTE Length = 767 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 201/742 (27%), Positives = 344/742 (46%), Gaps = 101/742 (13%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMEL--------- 117 ++ + LP+++ K +IL+ + ++ +I+ G+TGSGK+TQLP+ ++ Sbjct: 2 SQEIQQFRATLPINEFKSEILKQVLENTFIIITGDTGSGKSTQLPQYLLDDEEFRLNICE 61 Query: 118 -------------------GRGIKG---------------LIGHTQPRRLAARTVANRIA 143 G K I TQPRR+AA ++A R+A Sbjct: 62 RRKKFLEEQVEEKEQTKVQGFLSKKQKPFIPEDRKNSTDLKIVVTQPRRMAAISMAKRVA 121 Query: 144 EELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERS 203 E G +GY +RF + ++ T ++ +TDGIL+ E QD+ L YD +I+DEAHERS Sbjct: 122 FERNQNLGIEVGYSIRFDNSTTNTTQLRYVTDGILVRECLQDKDLRGYDVVILDEAHERS 181 Query: 204 LNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP 262 L D L +K RR LK+IITSAT++ F +F P ++V G+++PVEV+Y Sbjct: 182 LYTDVLFALVKTAARRRKGSLKVIITSATLNINIFKSYFEGCPYVKVHGKSFPVEVKYSE 241 Query: 263 IVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL--------- 313 D A+ A+ E GDIL+F+ G + + Sbjct: 242 HNITQQKRNHD---AVNAAIRMHLHEGPGDILVFLPGSEDCEVCRKFCYERLAEVLNSGV 298 Query: 314 NLRHTEILPLYARLSNSEQNRVFQSHS--GRRIVLATNVAETSLTVPGIKYVIDPGTARI 371 + + LY ++ +Q++VFQ R+I+ TN+AETSLT+ I +V+D G + Sbjct: 299 EVPSVLLYTLYGSQTSEDQSQVFQRADEHTRKIIFCTNIAETSLTIDNIGFVVDTGYVKQ 358 Query: 372 SRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRT 431 Y+ RT + L I+PIS+ A QR GR GR G C RL+S+ + S E T EI+R Sbjct: 359 KVYNPRTGMDSLIIQPISKTQAIQRTGRAGRTQAGKCYRLFSKQFYESLSEHTTAEIMRV 418 Query: 432 NLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491 NLASV+L + ++G+ D+ F F+E P + I +R L + AI D +TP+G Sbjct: 419 NLASVMLLLKSMGIDDVVRFEFMEQPTQEAILQSLRQLYLIQAIDEDGY-----ITPMGY 473 Query: 492 QLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER----PMDKQQASDEKHRR 547 ++S+ P++P A+ ++ ++ C E I + LS + +R +D Q E + Sbjct: 474 EMSRYPLEPSYAKALITSKMMECSSEMSAIVAILSTESIWQRITRVDVDGYQKLQEIQSQ 533 Query: 548 FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKE 607 D D L+ + +++ + + + LN +++ +I QL+Q+V+ Sbjct: 534 HADPAGDHLSLLKVFSEWKQAV------FNEQFAKDTLLNLRSLKQSDNIRQQLQQLVEG 587 Query: 608 ------------------LGIPVNSEPAE-YREIHIALLTGLLSHIGMKDADKQEYTGA- 647 +S+ I ++L +G + K + ++ Sbjct: 588 TSRKKCLQFYEQDYLYKLFRKQKDSKKWNINESIKLSLCSGFYFNTARKMHNGEDTYLMV 647 Query: 648 --RNARFSIFPGSG--LFKKPPKWVMVAELVETSRLW--GRIAARIDPEWVEPVAQHLIK 701 P S + ++ P+ V+ EL TS++ ++ + I+ EWV+P +++K Sbjct: 648 YPEGTVVDTDPQSVYTVIQQYPETVIFTELGGTSQVRGVMKLISEINIEWVKPYFSNMVK 707 Query: 702 RTYSE-PHWE-RAQGAVMATEK 721 + E + +G E+ Sbjct: 708 VDLFKLARIEFQQRGRDAVHER 729 >UniRef50_UPI00006CF98F hypothetical protein TTHERM_00419730 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CF98F Length = 782 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 343/733 (46%), Gaps = 119/733 (16%) Query: 67 ARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR------- 119 ++ + ++LP+++ KQ I+E ++++ ++ G+TGSGK+TQLP+ ++ Sbjct: 4 SQSIEDFRNSLPITEHKQKIIEIVKNNLFCVITGDTGSGKSTQLPQYILDSQEILDVLKE 63 Query: 120 --------------------GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVR 159 K + TQPRR+AA ++A RI E G +GY +R Sbjct: 64 NQKKYDLQNNKKSKLNHLHEDNKVSVVITQPRRVAAISMAKRICYERNVSLGDDVGYTIR 123 Query: 160 FSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR 219 F D S T +K MTDGIL+ E QD L +Y+ +I+DEAHERSL D L +K+ + + Sbjct: 124 FDDKTSSKTHLKYMTDGILVRECLQDDTLSKYNVVILDEAHERSLYTDVLFALIKQAVKK 183 Query: 220 RP-DLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAI 278 R LK+I+TSAT++ ++FS+ F+N P++ + G+ Y VEVRY+PI+ ++ Sbjct: 184 RQGSLKLIVTSATLNTDQFSKFFDNCPVLSMKGKLYNVEVRYKPILMNLR------IEES 237 Query: 279 FDAVDELS-QESHGDILIFMSGEREIR----DTADALNKLNLRHTE-----ILPLYARLS 328 + + ++ E GDIL+F++G E + L K E I LY L Sbjct: 238 INIIMKIHLNEGPGDILVFLTGSEECEIAKNQCIERLQKDLENGVELAGMMIFSLYGSLG 297 Query: 329 NSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386 + +Q ++F + R++V +TN+AETSLT+ I +VID G + Y+ RT + L + Sbjct: 298 SEDQQQIFMKTPENCRKVVFSTNIAETSLTIDNIGFVIDCGYVKQKCYNPRTGMDALIVV 357 Query: 387 PISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGL 445 PISQ A QR GR GR EG+C RLYS+ + T PEI R +L SV+L + ++G+ Sbjct: 358 PISQVQAVQRTGRAGRTQEGLCFRLYSKKFYDEDMKPHTVPEIKRVSLNSVVLTLKSMGI 417 Query: 446 GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARM 505 D+ F ++E PD+ + ++ L L AI D ++T LG+++++ P++P A+ Sbjct: 418 HDVINFDYMEHPDREQLLQALKQLYFLQAIEQDG-----RITDLGKEMNKFPLEPSYAKS 472 Query: 506 VLEAQKHGCVREAMIITSALSIQDPRERPMDKQ----QASDEKHRRFHDKESDFLAFVNL 561 +L + C E + + + LS + +P + + +E +RF D + D + +N+ Sbjct: 473 LLTSYMLRCEDEMITLVALLSSEQIWSKPSRVRAQDYERFEECLKRFADPDGDHFSLLNI 532 Query: 562 WNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPV--------- 612 + + ++++ N +++ ++I Q+ ++K + V Sbjct: 533 YYSWKR------NKCSDGYAKSNFFNIRALKQGENIKIQINDLIKNIDKDVLKKFYKEDS 586 Query: 613 -----------------------------------------NSEPAEYREIHIALLTGLL 631 N + +AL +G Sbjct: 587 MYLYYKENREKKDSDSKSKSNSQKKEDKYNEKFDQKNQKQQNPVLTQSDIFRLALASGFY 646 Query: 632 SHIGMK-DADKQEYTGA--RNARFSIFPGSG--LFKKPPKWVMVAELVETSRLW--GRIA 684 + K Y I P S + + P V+ EL T+++ R Sbjct: 647 YNSARKVQNSTDSYLLIYPEGNVVDIDPQSVYSITQNYPPHVIFTELGGTNQVRGVMRYV 706 Query: 685 ARIDPEWVEPVAQ 697 ++IDP WV P Sbjct: 707 SQIDPFWVSPYIP 719 >UniRef50_Q9DBV3 Probable ATP-dependent RNA helicase DHX34 n=23 Tax=Euteleostomi RepID=DHX34_MOUSE Length = 1145 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 203/592 (34%), Positives = 329/592 (55%), Gaps = 21/592 (3%) Query: 28 SRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIL 87 +R HG + P+ + + +D + R A LP++Q IL Sbjct: 117 TRGRHGPGRGLPPERVSEFRRALLHYLDFQQKQAFGRLA--KLQRERAALPIAQYGNRIL 174 Query: 88 EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELK 147 + +++HQVV+VAG+TG GK+TQ+P+ + G + TQPRR+A ++A R+ E Sbjct: 175 QTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIACISLAKRVGFESL 231 Query: 148 TEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNID 207 ++ G +GY++RF S T + +T G+LL +IQ++ L QY +I+DE HER L+ D Sbjct: 232 SQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHND 291 Query: 208 FLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEA 267 FLLG L+ LLP+RPDLK+I+ SATI+ FS +F++AP+++V GR +P+ V Y+P + Sbjct: 292 FLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQ 351 Query: 268 DDTERDQLQ-----AIFDAVDELSQ-ESHGDILIFMSGEREIRDTADALNKLNL--RHTE 319 ++ ++L + +A+D E GD+L+F+SG EI DA + Sbjct: 352 TASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQAYASLTQRWV 411 Query: 320 ILPLYARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 +LPL++ LS S+Q++VF R+ +L+TN+AETS+T+ GI++V+D G + Y + Sbjct: 412 VLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQ 471 Query: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 K+QRL ISQASA QRKGR GR G+C RLY+E D+ + + PEI R L +++ Sbjct: 472 AKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALV 531 Query: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497 LQM ++ +GD FPF+E P +++ + L+E GA+ + E LTP+G L+QLP Sbjct: 532 LQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSE-----ALTPIGSLLAQLP 586 Query: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 557 VD + +M++ + I +ALS+Q P R R + D Sbjct: 587 VDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDPFT 646 Query: 558 FVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELG 609 N++N + + S N R+ CR + R+ E ++ Q ++++++ G Sbjct: 647 LFNVFNAWVQVKSERSGN-SRKWCRRRGVEEHRLYEMANLRRQFKELLEDHG 697 >UniRef50_A4ICP7 DEAH-box RNA helicase, putative n=4 Tax=Trypanosomatidae RepID=A4ICP7_LEIIN Length = 944 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 221/802 (27%), Positives = 360/802 (44%), Gaps = 150/802 (18%) Query: 43 QQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET 102 ++ F E+ ++ A R +LP+ Q ++++++ IRD++VVI+ GET Sbjct: 164 REKTFAELQEDRAAALQGQKER-----LQLQRRSLPMHQAREELVKLIRDNRVVIIVGET 218 Query: 103 GSGKTTQLPKICMELGRGIKGL-------------------------------------- 124 GSGKTTQL + E G + Sbjct: 219 GSGKTTQLLQYLYEEGFHLGPKARKRLLTTPAGAAASSKMKAEADGEGDRAMADEEQEEE 278 Query: 125 --IGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182 + TQPRR+AA +VA R+A+E+ G +GYKVRF D T + +TDG++L E Sbjct: 279 LRLICTQPRRIAAISVAERVAQEVGCPCGSVVGYKVRFDDKTGPLTRILFVTDGMMLKEF 338 Query: 183 QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242 D L I++DEAHERSL+ D LLG L++++ R PDLK+I+ SATI+ E+FS F+ Sbjct: 339 TNDPDLSSVGAIMVDEAHERSLSTDILLGLLRDVIRRNPDLKVIVASATINAEKFSDFFD 398 Query: 243 NAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS--QESHGDILIFMSGE 300 AP+ VSGRTYPVE+ Y D+ D + V L + GD+L+F+ G+ Sbjct: 399 KAPVFTVSGRTYPVELFYS------DEPVADYVTESAQTVLGLHLSKPLPGDVLVFLPGQ 452 Query: 301 REIRDTADALNKLN------LRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAE 352 I A+ L LR ILP+Y+ + EQ R+++ R++V+ATN+AE Sbjct: 453 DAIETCAETLQSYMDEAKGRLRPLLILPIYSSMPPKEQARIYERTLPGTRKVVIATNIAE 512 Query: 353 TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412 TS+T+ G+ YV+D G + Y+ + V+ L + P SQASA QR GR GR G C RL+ Sbjct: 513 TSITIDGVVYVVDCGLCKQDYYNPQAMVEELRVVPTSQASATQRAGRAGRTQPGECYRLF 572 Query: 413 SEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEE 471 + F + P T PEILR ++++V+LQ+ ALG+ ++ F F++AP +++ + L Sbjct: 573 TAYTFHNELPPETIPEILRCSMSAVVLQLKALGIHNLLQFDFLDAPSTASLERALDHLFL 632 Query: 472 LGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPR 531 LGA+ D +LT GR++++ P++P L++ ++ A GC R + + +++ Sbjct: 633 LGAMKADG-----RLTVTGRRMAEFPLEPSLSKCLIRACALGCGRHMAMAAAMITLDSIF 687 Query: 532 ERPMDKQQASDEKHRR---FHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNY 588 D ++ K R F D ++ L CR++ +N Sbjct: 688 INTRDAKERQHIKSAREHLFGFGNGDVTGYIRLMEEWLRAGPRAG-----EFCRSNCINA 742 Query: 589 LRVREWQDIYTQLRQVVKELGIPVNSEPA---------------------------EYRE 621 + +D+ Q+ + +G+ V P+ + Sbjct: 743 RSMLRARDVLDQILKTFDRIGLDVERVPSKSHSDGKDLDDENDALEKVLSAAANQIDVEA 802 Query: 622 IHIALLTGLLSHIGMKDADKQEYTGAR--------------------NARFSIFPGSGLF 661 + ALL+G ++ +ADK Y R + I P S LF Sbjct: 803 VTRALLSGFFFNVAKLEADKWSYLVVRPMDTSVPTGAKRLESAGTAEASVAEIHPTSFLF 862 Query: 662 --------------------------KKPPKWVMVAELVETSRLWGRIAARI-DPEWVEP 694 ++ P V+ ++ +++ + I EWV Sbjct: 863 GAGRKSNAHRTPSGTTDAEAGVPPVLRERPGLVVFLQMRRSTKRFMTHVTAIASAEWVLQ 922 Query: 695 VAQ-HLIKRTYSEPHWERAQGA 715 A + + E + Q A Sbjct: 923 SAPVNYFRPEELETGLRKRQRA 944 >UniRef50_A5JEL1 Putative uncharacterized protein n=1 Tax=Nosema bombycis RepID=A5JEL1_NOSBO Length = 722 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 186/630 (29%), Positives = 322/630 (51%), Gaps = 33/630 (5%) Query: 79 VSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTV 138 V K I + + +H V+++ G TG GKTT++P++ + I TQPRR+AA +V Sbjct: 104 VDDKIDQIKDLLENHNVLLIQGNTGCGKTTRIPRLLL----SKYKKIVCTQPRRIAAISV 159 Query: 139 ANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDE 198 A ++A+++ +E G +GY VRF + S+NT +K +TDGI+L EI DR L +YD +IIDE Sbjct: 160 AKKVAKDMNSEIGKLVGYSVRFENVSSENTRLKFVTDGIILKEILFDRNLKKYDCVIIDE 219 Query: 199 AHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEV 258 AHERSLNID LLGYLK LL R DLKIII SATI E+F F N P + + +T+P+ Sbjct: 220 AHERSLNIDILLGYLKRLLKIRKDLKIIIMSATIATEKFVNFF-NCPCVTIKHKTFPLTN 278 Query: 259 RYRPIVEEADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTA-DALNKLNLR 316 + E + + V +L + E GD+L+F++G+ EI+D L L+ Sbjct: 279 YFIKSYEPTN-----YFEETLKTVIKLYKTEPTGDVLVFLTGQDEIKDAYFTLLEHLDND 333 Query: 317 HTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 376 EIL +++ + +Q +F+ + R+I+L+TN+ ETS+T+ I+YV+D G ++ +YS Sbjct: 334 KCEILMVFSTMPPQDQELIFKKTNKRKIILSTNICETSITIENIRYVVDCGRVKMKKYSD 393 Query: 377 RTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASV 436 ++ L + IS+A ANQR GR GR G R+++ +++ + E PEIL NL Sbjct: 394 SLGIEILDVVNISKAQANQRSGRAGRTQPGTVFRIFTRNEYKNMIENPIPEILSCNLNDA 453 Query: 437 ILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQL 496 +L + +LG+ ++ F ++ P ++ + + L AI + +T G+++S + Sbjct: 454 VLILKSLGITNLKIFDMIDKPTLESVNNSLEYLFITRAINVKGE-----ITLFGKRISNI 508 Query: 497 PVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ---QASDEKHRRFHDKES 553 P+D L+ +L + + GC E I S LS+ + E+ + S Sbjct: 509 PLDANLSISLLASIQFGCFEEVSTIVSMLSVDQIFMDITSTNFLYKKYIERRESLKNNYS 568 Query: 554 DFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN 613 DF+ ++++ + ++ + ++L+ + + + I QL++ Sbjct: 569 DFVMLLDIYQGWEKTL------FDKKYLKHNFLSTRNMWQAKRIREQLKRQFN------I 616 Query: 614 SEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAEL 673 + I +A G + + T + S ++KK K+++ + Sbjct: 617 KNSSNRENILLAFCAGFYPNTAKL-VEGSYKTIFNETNCYVHFTSCIYKKYSKYILYYSI 675 Query: 674 VETSRLWGRIAARIDPEWVEPVAQHLIKRT 703 +T + + R I E + V + I+ Sbjct: 676 TKTKKEYLRYCNEITSEMLCSVLKRTIELE 705 >UniRef50_A0C1Q2 Chromosome undetermined scaffold_142, whole genome shotgun sequence n=3 Tax=Paramecium tetraurelia RepID=A0C1Q2_PARTE Length = 708 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 189/642 (29%), Positives = 329/642 (51%), Gaps = 30/642 (4%) Query: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134 +NLP+ K+ IL + + +I+ ETGSGKTTQ+P+ +E G G + + + PR++A Sbjct: 12 ENLPIRAYKEQILYGVDTNSTLIILAETGSGKTTQIPQYLIEAGYGGEDRVLVSLPRKMA 71 Query: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194 A ++A R+++E TE G IGY+VRF VS+NT ++ +TDG L+ I + L+ Y + Sbjct: 72 AISIAQRVSDENGTELGQDIGYRVRFESKVSENTKIEYVTDGTLIQIIMGNPLIEGYSVV 131 Query: 195 IIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254 ++D+ HER+LN D LL +K++ +RP+LK+I++SAT++ + F N+ II + GR Y Sbjct: 132 MLDDIHERTLNTDLLLCLIKKIQKKRPELKVIVSSATMEVDLLQNFFPNSKIIAIRGRNY 191 Query: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQE-SHGDILIFMSGEREIRDTADALNKL 313 V++ Y + ++ + A + + ++ GD+L+F++ EI + L Sbjct: 192 EVDIMYL------LEPCKNYVIAAVELAYHIHKKMPEGDVLVFLTSVEEIHAFIN-LWSH 244 Query: 314 NLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISR 373 + + +LPL+A L +Q VF+ H+ R+I+++TNVAE+S+T+ GI YVID ++ Sbjct: 245 HKANCVVLPLHANLGIDKQLLVFKQHASRKIIVSTNVAESSVTIDGIVYVIDSCYQKVKV 304 Query: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433 Y Y+ +++L I PISQ S QR GR GR +GIC RL +++D+ + P+ PEILR+NL Sbjct: 305 YDYKRNLEQLNILPISQQSGAQRAGRAGRTRDGICYRLCTKEDYQNLPKTFPPEILRSNL 364 Query: 434 ASVILQMTALGL-GDIAAFP--FVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLG 490 +ILQ+ + L + F+ + + + +L L I + + LT LG Sbjct: 365 TELILQIRSFSLTPNHLQCSNTFLTPVSNEQLINCINILMSLKLIDEN-----FSLTELG 419 Query: 491 RQLSQLPVDPRLARMVLEA--QKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548 + P++ +LA V + ++ C E + I S LSIQ + + Sbjct: 420 NAIVDYPLETQLAVCVENSFLEEFQCSDEMLKIASILSIQGGIFSSDATPLQMLKAKKAL 479 Query: 549 HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKEL 608 +E D L+ N++ + C T ++ ++ IY Q+++ K Sbjct: 480 GCREGDVLSLHNIFVRYINIGNKGN------WCDTYRVSKYKLESAGKIYKQIQK--KRK 531 Query: 609 GIPVNSEPAEYREIHIALLTGLLSHIGMKD---ADKQEYTGARNARFSIFPGSGLFKKPP 665 + S + I ++G S + ++ + + P S L P Sbjct: 532 NRQIKSSIQDVEAIQRCFVSGFFSQVAQRENTAREGVYRNIYTKQLVHLHPASVLTVSYP 591 Query: 666 KWVMVAELVETS-RLWGRIAARIDPEWVEPVAQHLIKRTYSE 706 +WV+ EL+E + +L +DP W+ +A H + E Sbjct: 592 EWVIYHELIEQNHKLTMHNVTELDPHWLFEIAPHFYRDARQE 633 >UniRef50_C1M0G7 ATP-dependent RNA Helicase, putative n=1 Tax=Schistosoma mansoni RepID=C1M0G7_SCHMA Length = 771 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 208/776 (26%), Positives = 346/776 (44%), Gaps = 106/776 (13%) Query: 35 KKVKNPDAQQAIFQEMAKEIDQAAGK---------VLLREAARPEITYPDNLPVSQKKQD 85 + +PD+++ + ++++E+ + + ++ LPV K+ Sbjct: 3 SRFIHPDSEERLGFDLSEEVPEPNEDGGCGSSILQFPISDSFHSVEQQRQQLPVFTKRSQ 62 Query: 86 ILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGL---------IGHTQPRRLAAR 136 L + + +V++V GETGSGK+TQLP+ E G + TQPRR+AA Sbjct: 63 FLYLLENSRVLVVTGETGSGKSTQLPQYVYEAGWLDSKSSNFNPFGVTMAVTQPRRVAAL 122 Query: 137 TVANRIAEELKTEPGGCIGYKVRFSDH-VSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195 ++A R+AEE G +GY +RF + ++T++ +T+G+++ E+ +D LL ++ I+ Sbjct: 123 SLATRVAEEKNWRIGKQVGYIIRFEECWTPNSTVISYLTEGMMIQELLRDPLLTRFRVIM 182 Query: 196 IDEAHERSLNIDFLLGYLKELLPRRP-DLKIIITSATIDPERFSRHFNNAPI-------- 246 +DE HERSL D LLG +K++L +RP DL++II+SAT++ E+F +F+ I Sbjct: 183 LDEVHERSLQTDILLGLIKKVLRKRPIDLRVIISSATLEAEKFIEYFSKMKIPEVETQKQ 242 Query: 247 ---------IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESH--GDILI 295 + V GR Y V + Y D + A + V + + GDILI Sbjct: 243 GLKLTPVSHLNVEGRQYTVSIFYS------LDPVPCYISAAKETVFRIHETKPLGGDILI 296 Query: 296 FMSGEREIRDTADALNKLNL----------------------RHTEILPLYARLSNSEQN 333 F++G+ E+ L + L L+ L EQ Sbjct: 297 FVTGQNEVSQLVSNLIEEYRNRKERFLNTQQQSSKTKLPTTYPPLRCLQLHGSLPQHEQL 356 Query: 334 RVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQA 391 R+F+ S R++++ATNVAE S+T+PGI YVID G +RI Y+ ++ L PISQA Sbjct: 357 RIFERPTRSCRKVIVATNVAEASVTIPGISYVIDCGFSRIRAYNPVNGLEALVTIPISQA 416 Query: 392 SANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASVILQMTALGLGDIAA 450 SA QR GR GR G RLY+E+ + P FT PE LR +L+ +L++ LG+ +A Sbjct: 417 SARQRAGRAGRTRTGQAYRLYTEEAYNKLLPRFTLPESLRVDLSGALLRLKTLGIDRLAQ 476 Query: 451 FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLT-PLGRQLSQL----PVD-PRLAR 504 F +++ P ++ L LGA+ S+ LT P G +L+++ +D P A Sbjct: 477 FDWLDPPPASHVGQSAERLVALGALDA----SSGHLTIPRGLKLAEVSTTCGLDQPSTAA 532 Query: 505 MVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNY 564 +L A GC +E I S + IQ K + + + F ++ D L +N + Sbjct: 533 ALLGACDEGCSQEIAAIVSLMQIQRIFTVSDYKHTSDRIRRQTFGCQQGDHLTELNAFVA 592 Query: 565 LGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVN--SEPAEYREI 622 Q K LS + R CR LN + + ++ + L +P + Sbjct: 593 YENQSKLLSKSELRTWCREVGLNERGLAHAVILRDRIGSMFHRLKLPWVKAEPEGNPNPV 652 Query: 623 HIALLTGLLSHIGMKDADKQEYTGARN-ARFSIFPGSGLFKKP---PKWVMVAELVET-- 676 A++ G + Y R + + P L+ P +++ + T Sbjct: 653 LRAIVRGFFHQAARLASSGSHYLTIRGDHQLRLHPNCILYSSTTRWPAYILFTNVFLTPS 712 Query: 677 ------------------SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQG 714 S + I P+W+ +A H + H E + G Sbjct: 713 LDYNNDTKSNINNNKNDLSSTCISGVSVIQPDWLLELAPHYYQFGTDREHLEHSLG 768 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.162 0.498 Lambda K H 0.267 0.0498 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,188,058,587 Number of Sequences: 3077464 Number of extensions: 486733922 Number of successful extensions: 1544359 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2660 Number of HSP's successfully gapped in prelim test: 3037 Number of HSP's that attempted gapping in prelim test: 1514293 Number of HSP's gapped (non-prelim): 13436 length of query: 1300 length of database: 1,040,396,356 effective HSP length: 141 effective length of query: 1159 effective length of database: 606,473,932 effective search space: 702903287188 effective search space used: 702903287188 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 100 (42.8 bits)