52 c3oiyB_ Probab=99.64   E-value=4.4e-14  Score=119.06  Aligned_columns=297  Identities=17%

Q ss_pred             HHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEE---
Q ss_conf             78999999999868959997687678424688999865878998089968826999999999999837798872014---
Q batch____        80 SQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGY---  156 (1300)
Q Consensus        80 ~~~r~eIl~aI~~nqVvII~GeTGSGKTTQiPq~lle~g~~~~g~I~~TQPRRiAA~svA~RVA~Elg~~lG~~VGY---  156 (1300)
                      +.+..+++..+-+|.-+||+++||||||...-.+++.. ...++++++.-|.|.-+...++++.+..+......+.+   
T Consensus        22 ~~~Q~~~~~~~~~~k~~ii~apTGsGKT~~~~~~~~~~-~~~~~~~liivP~~~L~~Q~~~~l~~~~~~~~~~~~~~~~~  100 (400)
T c3oiyB_          22 TGYQRLWAKRIVQGKSFTMVAPTGVGKTTFGMMTALWL-ARKGKKSALVFPTVTLVKQTLERLQKLADEKVKIFGFYSSM  100 (400)
T ss_dssp             CHHHHHHHHHHTTTCCEECCCSSCTTHHHHHHHHHHHH-HTTTCCEEEEESSHHHHHHHHHHHHHHCCSSCCEEECCTTS
T ss_pred             CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH-HHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             88999999999779979999079987789999999999-86099399996448999999999996127785599995376


Q ss_pred             ----EEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEECCC--------------CCCHHHHHHHHHHHHHHH
Q ss_conf             ----76243765899439996596999897418460388889996873--------------188668899999999986
Q batch____       157 ----KVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAH--------------ERSLNIDFLLGYLKELLP  218 (1300)
Q Consensus       157 ----~VRfe~~~s~~T~I~~~TdGiLLrel~~Dp~L~~ys~IIIDEaH--------------ERsl~tD~LL~lLK~ll~  218 (1300)
                          ...............+.+....+........+..+++||+||+|              ......+...........
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iviDE~h~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (400)
T c3oiyB_         101 KKEEKEKFEKSFEEDDYHILVFSTQFVSKNREKLSQKRFDFVFVDDVDAVLKASRNIDTLLMMVGIPEEIIRKAFSTIKQ  180 (400)
T ss_dssp             CHHHHHHHHHHHHHTCCSEEEEEHHHHHHCHHHHTTCCCSEEEESCHHHHHTSHHHHHHHHHHTTCCHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCC
T ss_conf             41257765532012432100146355544430357354149997081266431541568988506314432322332011


Q ss_pred             --------HCCCCEEEEECCCCCH----HHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             --------4899679995487698----9999872899899957812440688636654465630338999999999986
Q batch____       219 --------RRPDLKIIITSATIDP----ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS  286 (1300)
Q Consensus       219 --------~R~dLKlIimSATld~----e~f~~yF~~apvi~V~GR~fPVev~Y~p~~~~~~~~~~d~~~~i~~~v~~i~  286 (1300)
                              ....-.++++|||...    ..+...+....+.....-...+...+.....             ...+..+.
T Consensus       181 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~~~~~l~  247 (400)
T c3oiyB_         181 GKIYERPKNLKPGILVVSSATAKPRGIRPLLFRDLLNFTVGRLVSVARNITHVRISSRS-------------KEKLVELL  247 (400)
T ss_dssp             TCCCCCCTTCCCCEEEECSSEECCCCSTTHHHHHHSSCCCEECCCCCCCEEEEEESSCC-------------HHHHHHHH
T ss_pred             HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCH-------------HHHHHHHH
T ss_conf             12334642156745999716886799999841474058853577655331699997596-------------89999999


Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEECC
Q ss_conf             08999799988988999999999973477882896503579989999984779996799977732013231885899738
Q batch____       287 QESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDP  366 (1300)
Q Consensus       287 ~~~~GdILVFLPG~~EI~~~~~~L~~~~~~~~~ilpLhs~Ls~~eQ~~vf~p~~~RKIILATNIAETSlTIpgI~yVIDs  366 (1300)
                      ......++||.+.....+.++..+...   .+....+|+.....++.-   ..+.-+|+++|+...-.+..| +.+||+.
T Consensus       248 ~~~~~~~lvf~~~~~~~~~l~~~~~~~---g~~~~~~~~~r~~~~~~f---~~g~i~vLv~t~~~~~~i~~~-~~~vi~~  320 (400)
T c3oiyB_         248 EIFRDGILIFAQTEEEGKELYEYLKRF---KFNVGETWSEFEKNFEDF---KVGKINILIGVQAYYVDLPER-IKYVIFW  320 (400)
T ss_dssp             HHHCSSEEEEESSHHHHHHHHHHHHHT---TCCEEESSSCHHHHHHHH---HTTSCSEEEEETTCCCCCTTT-CCEEEEE
T ss_pred             HHHCCCCCEEECHHHHHHHHHHHHHHC---CCCEEEEEHHHHHHHHHH---HCCCCCEEEECHHHCCCCCCC-CCEEEEE
T ss_conf             863016713413089999999888865---972676500457888886---259867898460322768676-5789981


Q ss_pred             CCEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             93121000245686045463104888987445608888853787235
Q batch____       367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYS  413 (1300)
Q Consensus       367 Gl~k~~~yd~~~~~~~L~~~~ISkAsA~QRaGRAGRv~~G~CyRLys  413 (1300)
                      +..+..                +.++-.||.|||||.++|.....|+
T Consensus       321 ~~~~~~----------------~~~~~~Qr~GR~~R~~~~~~~~~~~  351 (400)
T c3oiyB_         321 GTPSGP----------------DVYTYIQASGRSSRILNGVLVKGVS  351 (400)
T ss_dssp             SCCTTT----------------CHHHHHHHHHTTCCEETTEECCEEE
T ss_pred             CCCCCC----------------CHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             888888----------------9989998743332027998348999