Job Description P20083 Confidence 54.44% Date Thu Jan 5 11:37:45 GMT 2012 Rank 84 Aligned Residues 81 % Identity 21% Template c2gajA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form Resolution 1.95 Å

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		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.													.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	L	V	E	G	D	S	A	G	G	S	A	K	Q	A	R	D	R	E	Y	Q	A	I	M	P	L	K	G	K	I	L	.	.	.	.	.	.	.	.	.	.	.	.	N	T	W	E	V	S	S	D	E	V	L	A	S	Q	E	V	H	D	I	S	V	A	I	G	I	D	P	D	S	D	D	L	S	Q	L	R
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.										.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																								.																																													.	.	.	.	.	.	.	.
Template Sequence		Y	I	V	V	E	S	P	A	K	A	K	T	I	K	S	I	L	G	N	E	Y	E	.	V	F	A	S	M	G	H	I	I	D	L	P	K	S	K	F	G	V	D	L	E	K	D	F	E	P	E	F	A	V	I	K	G	K	E	K	V	V	E	K	L	K	D	L	.	.	.	.	.	.	.	.	A	K	K	G	E
Template Known Secondary structure						S													G	G	G	S		.						S		S			S		S	S	S					T	T	T	T	T								T	T												.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																								.																																													.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	K	I	C	I	L	A	D	A	D	S	D	G	L	H	I	A	T	L	L	C	A	L	F
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	L	I	A	S	D	M	D	R	E	G	E	A	I	A	W	H	I	A	R	V	T
Template Known Secondary structure		.	.	.							S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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