BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (181 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS... 363 2e-99 UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS... 197 1e-49 UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431... 180 2e-44 UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1... 107 2e-22 UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID... 101 1e-20 UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH 95 9e-19 UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter... 88 1e-16 UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E... 86 6e-16 UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep... 68 1e-10 UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk... 62 6e-09 UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ... 60 3e-08 UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ... 56 5e-07 UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term... 54 2e-06 UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term... 54 2e-06 UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae... 50 5e-05 UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom... 48 1e-04 UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI... 45 0.001 UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass... 44 0.002 UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba... 41 0.020 UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei... 40 0.026 UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=unc... 40 0.035 >UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD Length = 181 Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 178/181 (98%), Positives = 179/181 (98%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE Sbjct: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLRREVEEL QASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR Sbjct: 61 KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 Query: 181 G 181 G Sbjct: 181 G 181 >UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21 Length = 182 Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 93/181 (51%), Positives = 133/181 (73%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M+VNKK+LA+IF RTI+ WQ QG+P G KG E ++D+A I+WYA+R+ +IENE Sbjct: 1 MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLR+E+++L A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+ V+ET TF+L R Sbjct: 61 KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 +A EI+ IL +PL++QR++P++ H+D +K +I KA N AA E + G + ++ Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180 Query: 181 G 181 G Sbjct: 181 G 181 >UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15 Length = 168 Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 18/180 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +NK +A G S++ W Q PV + +G EV +D +V+ D +EN+ Sbjct: 5 LNKSDMASSLGISVQAFDKWGVQ--PVEK---RGREVFFDVRSVV------DNRLENQSR 53 Query: 63 RREVEELLQASETDLQPG-TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + LQ S D G I+YER RLTRA ADA EL N + EVVETAFCTFVLSRI Sbjct: 54 K------LQPSPGDDDDGVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRI 107 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181 A EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++YI+QSG Sbjct: 108 AAEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYIDQSG 167 >UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16 Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX Length = 180 Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 107/180 (59%), Gaps = 21/180 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGM-PVLRGGGKGNEVLYDSAAVIKWYAERD-AEIENE 60 +NKK +A S W G+ PV R KG E YD A+VI+ +++ N+ Sbjct: 6 MNKKNMAKSCRVSATAFDKW---GVTPVER---KGREAFYDVASVIENRVNNAISQLIND 59 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 K + +ELL+ R RL AQA+AQELKN RD +V++T FC + LS+ Sbjct: 60 KGEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSK 106 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 +A +I+SI+D +PL++QR FP++ +D LKR+++KA N +A + + +P +L++Y++++ Sbjct: 107 LASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLKET 166 >UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8 Length = 177 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/94 (55%), Positives = 67/94 (71%) Query: 84 YERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL 143 YER RL RAQA QE+KN +D EVVE F TFVL+RIA +IA +LD I + V+R+FP++ Sbjct: 80 YERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDI 139 Query: 144 ENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 R +D +K ++IK+ N AA L E I GLL EYI Sbjct: 140 PERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYI 173 >UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH Length = 159 Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 24/174 (13%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRR--- 64 +A G S++ W G+P + +G EVLYD V++ +R+ N++ Sbjct: 1 MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53 Query: 65 EVEE-LLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 E+EE LL+A R LT QA AQ+LKN +++++ FC F LS++A Sbjct: 54 ELEERLLRA-------------RAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAM 100 Query: 124 EIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 ++S LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EYI Sbjct: 101 ALSSTLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYI 154 >UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae RepID=B7ULU1_ECO27 Length = 169 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 8/116 (6%) Query: 70 LQASETDLQPGTIE--YE------RHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 L+ S+ D+ G E YE R LT QA Q+LKN ++++T FC F LS++ Sbjct: 49 LRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKL 108 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 A ++S LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EYI Sbjct: 109 AMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYI 164 >UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS8_9ALTE Length = 165 Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 24/177 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +N++Q+A ++ W+ + PV R G +V YD+ +V+ Sbjct: 10 LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVL--------------- 49 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E L + G IE ER RLT AQA+ QELKN ++ T LS +A Sbjct: 50 ----ENRLSKAGPAGSNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179 G A ILD +PL+++R++PEL + ++ +KR +KA N+ + LD ++ L +Y+ + Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDYLNE 162 >UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE Length = 169 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 17/178 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIK---WYAERDAEIEN 59 +NK ++A G S + W Q P+ R G E Y A V++ +A R + E Sbjct: 1 MNKSEMASSLGISPQAFDKWGVQ--PIER---IGREAFYTVADVVENRIQHAARKQQPEG 55 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 E L V+ ++A + R LTRAQ AQE KN + +V F T+ L+ Sbjct: 56 E-LPEGVDPYVEAK--------LMQARLELTRAQTYAQEQKNQVNDKLLVPVPFATYALA 106 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 +IA +I S L+ + +V +R PE++ ++ +R+I A N +A + +PG L EY+ Sbjct: 107 KIAAKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDEYL 164 >UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D857_LARHH Length = 171 Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 28/53 (52%), Positives = 37/53 (69%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDA 55 VNK++L+ I G S RT+ WQ +GMPV+ G+G+ YD+AAVIKWY R A Sbjct: 5 VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA 57 >UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15 Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3 Length = 139 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 8/80 (10%) Query: 70 LQASETDLQPGTIE--YE------RHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 L+ S+ D+ G E YE R LT QA Q+LKN ++++T FC F LS++ Sbjct: 49 LRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKL 108 Query: 122 AGEIASILDGIPLSVQRRFP 141 A ++S LD IPLS+QR+FP Sbjct: 109 AMALSSTLDSIPLSMQRQFP 128 >UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa RepID=Q87CG5_XYLFT Length = 191 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 +VN+ L++IFG ++ T+ W G PV++ GG+G E +D+A V +W ++ AE Sbjct: 24 QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++E E++R ++ A+A +EL A +V L+R+ Sbjct: 84 AVADIE---------------EWKRRKIA-AEAQREELHLADAKKQVAPLEQVEKTLARV 127 Query: 122 AGEIASILDGIP-LSVQRRFPEL-ENRHVDFLKRDIIKAMNKAAALD 166 E+ + L IP +V E E R+ L ++I + + A+LD Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174 >UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH Length = 174 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 23/130 (17%) Query: 1 MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 M+VNKKQLADIFG S RT +Q + P++ G+G YD+ AV + +R Sbjct: 1 MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDR------ 54 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 L E R RL R +A+ + L RD E+V + +L Sbjct: 55 ----------------ALSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98 Query: 120 RIAGEIASIL 129 ++ I + L Sbjct: 99 QVVTAIKTTL 108 >UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI Length = 163 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 5/68 (7%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLR---GGGKGNEVLYDSAAVIKWYAERDAEI 57 M+VNK+QLADI G + + + NWQ++G+PV G NE YD+ AVI+W +R+ E Sbjct: 1 MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANE--YDTVAVIRWMFQRELER 58 Query: 58 ENEKLRRE 65 N++ R+ Sbjct: 59 LNKEKPRD 66 >UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST Length = 184 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 EVN+ +LA+I G S+ T+ W +G PV++ GG+G +++A V W RD +I Sbjct: 12 EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSW---RDDDIR--- 65 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 QAS T + T + R A+ + EL AR E+V L++ Sbjct: 66 --------AQASHTGM--ATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115 Query: 122 AGEI-ASILDGIPLSVQRRF 140 GE+ A I + +P RR Sbjct: 116 FGEVRAGIRNVLPSRAARRL 135 >UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI8_POLNA Length = 168 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 22/109 (20%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 ++Q+A +FG + +TI WQ G P+ GG G YDS A I W R E K+R Sbjct: 5 GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGR----EVSKIR 60 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETA 112 E + RL+R Q D E RD ++ + Sbjct: 61 SET------------------PKDRLSRLQGDKIERDMMRDDGLLIPAS 91 >UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4 Length = 302 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 18/166 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 E+ LA+I G S R I ++ E+G+ V G + +D ++ Y E I + Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 V+ T+ ER RL R QAD L+NA E+V A I Sbjct: 183 GGDNVD-------------TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167 A + +++ +P ++ P L VD + +I A+ + D+ Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDD 275 >UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae RepID=B0ZSE9_9CAUD Length = 191 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 28/52 (53%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD 54 V+KK A + G S R I W ++GMP GGGKG + D+ I W R+ Sbjct: 5 VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRRE 56 >UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKR3_NITHX Length = 182 Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 17/162 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 EV+ K+LA++FG S R+++ ++G ++ +G +L +S ++ Y A + Sbjct: 10 EVSAKELAELFGISDRSVRELHDRG--TVKKSARGRYLLTES---VQLYT---AHLRGVA 61 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 R E DL ER RL + QADA LKNA E+V + + Sbjct: 62 AGRGGE----GGVLDLT-----VERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 ++ S + +P V++ P L D + R+I A+ A Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLA 154 >UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP Length = 233 Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 4/54 (7%) Query: 1 MEVNKKQLADIFGASIRTIQNW-QEQGMPVLRGGGKGNEVLYDSAAVIKWYAER 53 M +N QLA+ FG + +++W +++G+P +R G+ +++D A V+ W AER Sbjct: 1 MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAER 51 >UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2V9_9BACT Length = 267 Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 21/157 (13%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGG-GKGNEVLYDSAAVIKWYAERDAEIENEKLRR 64 +++ ++FG S RTI+ W EQG +++G N+ YD A+ ++ RD + + R Sbjct: 31 REIKELFGLSERTIRRWTEQG--IIQGTPALNNDFTYDFQALTQFRRVRDLRAQGHSI-R 87 Query: 65 EVEELLQAS--------ETDLQPGTIEYERHRLTRAQADAQELKN---ARDSAEVVETAF 113 ++E LQ E + +E + Q D + +++ A D+ + V A+ Sbjct: 88 QIEAELQGQLNLFRRVEENRIARLRTPFEEALVLDDQNDPRAIESYLEAIDNGDNVAEAY 147 Query: 114 CTF-VLSRIAGEIASILDGIPLSVQRRFPELENRHVD 149 C ++++ G + LD L+++ E RHV+ Sbjct: 148 CNLGIINKDLGNVGVALDNFTLALKH-----EPRHVE 179 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS... 229 4e-59 UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS... 204 9e-52 UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431... 173 2e-42 UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1... 159 5e-38 UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH 155 1e-36 UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep... 146 2e-34 UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E... 140 3e-32 UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter... 133 4e-30 UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI... 130 3e-29 UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID... 129 4e-29 UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ... 122 4e-27 UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae... 103 3e-21 UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term... 94 2e-18 UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom... 92 7e-18 UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk... 86 5e-16 UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term... 84 2e-15 UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ... 84 2e-15 UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass... 73 5e-12 Sequences not found previously or not previously below threshold: UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba... 91 2e-17 UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of termi... 76 5e-13 UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of termi... 72 9e-12 UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitroba... 68 1e-10 UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalk... 65 2e-09 UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomi... 63 3e-09 UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio ... 63 4e-09 UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenz... 63 6e-09 UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkhol... 58 1e-07 UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodoba... 56 5e-07 UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodoba... 54 2e-06 UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD 52 9e-06 UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreic... 51 1e-05 UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkhol... 49 8e-05 UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=... 48 1e-04 UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphapr... 48 2e-04 UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkhol... 47 2e-04 UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax... 47 2e-04 UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congreg... 47 3e-04 UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastop... 46 6e-04 UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei... 45 0.002 UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethios... 45 0.002 UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter ... 45 0.002 UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax... 44 0.002 UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escheri... 44 0.003 UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Esc... 43 0.004 UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfo... 43 0.006 UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobac... 42 0.007 UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1... 42 0.009 UniRef50_A6XRQ1 Putative uncharacterized protein n=1 Tax=Vibrio ... 42 0.010 UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmati... 41 0.019 UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminoc... 41 0.024 UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylo... 40 0.037 UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteur... 40 0.038 UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterob... 40 0.039 UniRef50_D1YLG3 Conserved domain protein n=2 Tax=Lactobacillus g... 40 0.042 UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Strepto... 40 0.042 UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francis... 39 0.071 >UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD Length = 181 Score = 229 bits (583), Expect = 4e-59, Method: Composition-based stats. Identities = 178/181 (98%), Positives = 179/181 (98%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE Sbjct: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLRREVEEL QASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR Sbjct: 61 KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 Query: 181 G 181 G Sbjct: 181 G 181 >UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21 Length = 182 Score = 204 bits (519), Expect = 9e-52, Method: Composition-based stats. Identities = 93/181 (51%), Positives = 133/181 (73%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M+VNKK+LA+IF RTI+ WQ QG+P G KG E ++D+A I+WYA+R+ +IENE Sbjct: 1 MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLR+E+++L A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+ V+ET TF+L R Sbjct: 61 KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 +A EI+ IL +PL++QR++P++ H+D +K +I KA N AA E + G + ++ Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180 Query: 181 G 181 G Sbjct: 181 G 181 >UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15 Length = 168 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 99/180 (55%), Positives = 119/180 (66%), Gaps = 18/180 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +NK +A G S++ W Q PV + +G EV +D +V+ E + Sbjct: 5 LNKSDMASSLGISVQAFDKWGVQ--PVEK---RGREVFFDVRSVVDNRLENQSR------ 53 Query: 63 RREVEELLQASETDLQPG-TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 LQ S D G I+YER RLTRA ADA EL N + EVVETAFCTFVLSRI Sbjct: 54 ------KLQPSPGDDDDGVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRI 107 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181 A EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++YI+QSG Sbjct: 108 AAEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYIDQSG 167 >UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16 Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX Length = 180 Score = 159 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 105/179 (58%), Gaps = 19/179 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD-AEIENEK 61 +NKK +A S W PV R KG E YD A+VI+ +++ N+K Sbjct: 6 MNKKNMAKSCRVSATAFDKWGV--TPVER---KGREAFYDVASVIENRVNNAISQLINDK 60 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + +ELL+ R RL AQA+AQELKN RD +V++T FC + LS++ Sbjct: 61 GEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSKL 107 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 A +I+SI+D +PL++QR FP++ +D LKR+++KA N +A + + +P +L++Y++++ Sbjct: 108 ASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLKET 166 >UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH Length = 159 Score = 155 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 16/173 (9%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A G S++ W G+P + +G EVLYD V++ +R+ N++ + Sbjct: 1 MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 EL + + R LT QA AQ+LKN +++++ FC F LS++A ++S Sbjct: 54 ELEER---------LLRARAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAMALSS 104 Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EYI + Sbjct: 105 TLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 157 >UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE Length = 169 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 15/177 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN--E 60 +NK ++A G S + W Q P+ R G E Y A V++ + A + Sbjct: 1 MNKSEMASSLGISPQAFDKWGVQ--PIER---IGREAFYTVADVVENRIQHAARKQQPEG 55 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 +L V+ ++A + R LTRAQ AQE KN + +V F T+ L++ Sbjct: 56 ELPEGVDPYVEAK--------LMQARLELTRAQTYAQEQKNQVNDKLLVPVPFATYALAK 107 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 IA +I S L+ + +V +R PE++ ++ +R+I A N +A + +PG L EY+ Sbjct: 108 IAAKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDEYL 164 >UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS8_9ALTE Length = 165 Score = 140 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 24/177 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +N++Q+A ++ W+ + PV R G +V YD+ +V+ Sbjct: 10 LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVL--------------- 49 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E L + G IE ER RLT AQA+ QELKN ++ T LS +A Sbjct: 50 ----ENRLSKAGPAGSNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179 G A ILD +PL+++R++PEL + ++ +KR +KA N+ + LD ++ L +Y+ + Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDYLNE 162 >UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae RepID=B7ULU1_ECO27 Length = 169 Score = 133 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 14/178 (7%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 ++S LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EYI + Sbjct: 110 MALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 167 >UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4 Length = 302 Score = 130 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 E+ LA+I G S R I ++ E+G+ V G + +D ++ Y E I + Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 V+ T+ ER RL R QAD L+NA E+V A I Sbjct: 183 GGDNVD-------------TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168 A + +++ +P ++ P L VD + +I A+ + D+ Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDDD 276 >UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8 Length = 177 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 15/175 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++K L S + W +PV G LY A V+ + + Sbjct: 14 LSKTDLCKSLEISTQAFDKW---DVPV--HSKLGRVCLYKMADVVGNRLANERK------ 62 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + E D ++YER RL RAQA QE+KN +D EVVE F TFVL+RIA Sbjct: 63 ----KTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIA 118 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 +IA +LD I + V+R+FP++ R +D +K ++IK+ N AA L E I GLL EYI Sbjct: 119 AQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYI 173 >UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa RepID=Q87CG5_XYLFT Length = 191 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 +VN+ L++IFG ++ T+ W G PV++ GG+G E +D+A V +W ++ AE Sbjct: 24 QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++EE + R A+A +EL A +V L+R+ Sbjct: 84 AVADIEEW----------------KRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARV 127 Query: 122 AGEIASILDGIP-LSVQRRFPEL-ENRHVDFLKRDIIKAMNKAAALD 166 E+ + L IP +V E E R+ L ++I + + A+LD Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174 >UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST Length = 184 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 19/168 (11%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 EVN+ +LA+I G S+ T+ W +G PV++ GG+G +++A V W Sbjct: 12 EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSW------------ 59 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 R+ + QAS T + T + R A+ + EL AR E+V L++ Sbjct: 60 --RDDDIRAQASHTGM--ATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115 Query: 122 AGEIA-SILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 GE+ I + +P RR E + L ++ + + A D Sbjct: 116 FGEVRAGIRNVLPSRAARRLIGESDETQIKAVLLDEVDQVLEALADTD 163 >UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH Length = 174 Score = 93.8 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 31/173 (17%) Query: 1 MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 M+VNKKQLADIFG S RT +Q + P++ G+G YD+ AV + +R Sbjct: 1 MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDR------ 54 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 L E R RL R +A+ + L RD E+V + +L Sbjct: 55 ----------------ALSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRH-----VDFLKRDIIKAMNKAAALDE 167 ++ I + L ++ EL+ R+ D L +A+ AAL + Sbjct: 99 QVVTAIKTTLLDSNHILKT---ELDARYDIDVEPDILDEHSRQALTHLAALGD 148 >UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI8_POLNA Length = 168 Score = 92.3 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 63/174 (36%), Gaps = 27/174 (15%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 ++Q+A +FG + +TI WQ G P+ GG G YDS A I W R+ Sbjct: 5 GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGRE--------- 55 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + E + RL+R Q D E RD ++ + + Sbjct: 56 -------------VSKIRSETPKDRLSRLQGDKIERDMMRDDGLLIPASEIEPMWEGAVI 102 Query: 124 EIASILDGIP-----LSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 L G P LS+ P LE + ++K N AA+ + G Sbjct: 103 AAREYLLGEPPRIASLSIGMEKPALEELLRTTFEAYLVKLSNWRAAMQDDDEGK 156 >UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKR3_NITHX Length = 182 Score = 90.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 17/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 EV+ K+LA++FG S R+++ ++G ++ +G Y ++ Y + + Sbjct: 10 EVSAKELAELFGISDRSVRELHDRG--TVKKSARGR---YLLTESVQLYTAHLRGVAAGR 64 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + ER RL + QADA LKNA E+V + + Sbjct: 65 GGEG------------GVLDLTVERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168 ++ S + +P V++ P L D + R+I A+ A D Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLADNDSD 159 >UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D857_LARHH Length = 171 Score = 86.1 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 22/131 (16%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 VNK++L+ I G S RT+ WQ +GMPV+ G+G+ YD+AAVIKWY R A Sbjct: 5 VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA------- 57 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E + RL R + D E++ A++ +V L + Sbjct: 58 ---------------NGASKESAKDRLDRLRGDQVEIEIAKELRRLVAIDEIEPALGQFV 102 Query: 123 GEIASILDGIP 133 + S++ +P Sbjct: 103 ADAVSLMAALP 113 >UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI Length = 163 Score = 84.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 27/184 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGK-GNEVLYDSAAVIKWYAERDAEIEN 59 M+VNK+QLADI G + + + NWQ++G+PV K G YD+ AVI+W +R+ E N Sbjct: 1 MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANEYDTVAVIRWMFQRELERLN 60 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 + E R RL R +A+ EL+ ++ A Sbjct: 61 K----------------------EKPRDRLDRVKAELAELERDEKLGQLAPAAMFERAWG 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYI 177 + +P + + D + I +A+ K + G + Sbjct: 99 DHVLAARTEFLTMPEQLAAELTATSGVEIDPDTIAAYINRALEKLSNYGAENDG--DDSR 156 Query: 178 EQSG 181 +G Sbjct: 157 NHAG 160 >UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15 Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3 Length = 139 Score = 83.8 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 14/139 (10%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFP 141 ++S LD IPLS+QR+FP Sbjct: 110 MALSSTLDSIPLSMQRQFP 128 >UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WZU0_OCHA4 Length = 173 Score = 76.1 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 10/161 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++K + + S + GMPV R G D A W +E N Sbjct: 20 ISKSGFSKLINVSPGRVSQMITAGMPVERDG------KIDVARCKLWISEN----INPTR 69 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + Q ++ ER RL +AQADA ELKNA E+V + + S Sbjct: 70 AASQAQGATLFGEEKQAISLTAERARLAKAQADAVELKNATIRRELVSASEVERLWSGEW 129 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 ++ S + +P +++ P L ++ + ++ + + + Sbjct: 130 MQLRSSVLAVPSRLRQLLPHLTAEDIEAIDGELRRMLTEFG 170 >UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae RepID=B0ZSE9_9CAUD Length = 191 Score = 72.6 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 9/135 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V+KK A + G S R I W ++GMP GGGKG + D+ I W R+ + Sbjct: 5 VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRREVRRQYGDD 64 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E E+ + G+ E L +A+ + ++ +V +L + Sbjct: 65 DDETEDGV---------GSASAEDRLLKKARREKLQIDIDLARRRLVPLDAVGRILQGVG 115 Query: 123 GEIASILDGIPLSVQ 137 A+ LD + + Sbjct: 116 AVFATQLDSLSSRLA 130 >UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=2 Tax=Rhodobacter RepID=A4WNS7_RHOS5 Length = 163 Score = 71.9 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 + + L ++ + + + +++G+ V RG YD AA + Y I Sbjct: 15 LRIGASDLCELLSLTPGALSDLKKRGIAVHRGHD-----AYDLAATVTAYVVHLRGIAAG 69 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + E ++ ER RL + QADAQ LKN E+V + S Sbjct: 70 RGGEE------------HTASLTAERARLAKEQADAQALKNGALRGELVAASEVERAWSD 117 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166 ++ S + +P + R+ L VD L R++ A+ + D Sbjct: 118 TLRKVRSRILAVPSRL-RQVVTLAPAEVDALDRELRDALMELGNAD 162 >UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW78_9BRAD Length = 151 Score = 68.4 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V KQLAD+ G + ++ Q+ G+ G K Y I+ Y E + + + Sbjct: 5 VTAKQLADLIGITTEHVRRHQQAGVVFKTGRDK-----YLLRESIRGYCEHLRGVASGRG 59 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 D T+ ER R R AD LKNA E+V + I Sbjct: 60 G------------DSAVATLTAERARQAREHADNTALKNAALRKELVPATDVVRGWADIL 107 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLK 152 ++ + L +P V ++ P L + + Sbjct: 108 TKVRAALLAVPSRVWQQAPHLTAEDKNIID 137 >UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR38_9GAMM Length = 181 Score = 64.6 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 17/169 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 + + K ++A S T+ W ++G PV G G +D AAV+ W +R A +E Sbjct: 3 LRLTKAEMAKALDVSTNTVGAWVKRGCPVQEQGRPGKPYTFDLAAVVSWLTDRPAAAGSE 62 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + ER L R + A EL+ R VV+ A ++ Sbjct: 63 AEAEDAASYRA-------------ERAALMRVRRQAAELEYQRQRRAVVDRAKAKRLIHE 109 Query: 121 IAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIKAMNKAAAL 165 I +A P V R L R + + + A Sbjct: 110 IGQALAKPWAQWPARVYAEIAAELQADGARVHQVLDRHVHRHLEDLARA 158 >UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK71_RHOVA Length = 174 Score = 63.4 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V+ +L++ G S + I+ G+ G+ Y A ++ +A+ Sbjct: 30 VSTFELSEWLGVSNQRIREMARAGLIPTITPGR-----YKLKAAVRAWAD---------- 74 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + Q + + R A AD EL N E++ + + + Sbjct: 75 ----WQRTSRPGMGSQSLALTAAKTRAAEATADKLELHNQAARRELIAASDVERAWATVL 130 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166 ++ + + +P VQ+R L + + +I A+++AA + Sbjct: 131 RDVRAGMLSVPSRVQQRMGHLTKHDILAIDAEIRTALSEAAHAE 174 >UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group RepID=A7MWA4_VIBHB Length = 200 Score = 63.0 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 8/179 (4%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 + + +A + G S R ++N +QG+ + G G + L + A I + ++ + Sbjct: 10 KFTQLDIATLLGISSRQVRNLTQQGVLPVAKGRNGIDPLACTHAYITYKSQAKTSDSKPE 69 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 +E EE E DL IE R +L +A K L ++ Sbjct: 70 TEQENEEAFAKLERDL---KIEERREKLAMLKA-----KRVLFEKTYAPIDTIVDTLEQV 121 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 + + LD + ++ +P++ V+ L+ I +N+ A + + + ++S Sbjct: 122 CARVGTRLDTLLPKLKNAWPDMPPEAVEVLEAVIAAVLNECADVQPNLSDYIDSDPDES 180 >UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QS27_9RHOB Length = 166 Score = 62.6 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 15/167 (8%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M Q+ADI G S + + ++G +L +++ Y+ I+ YA R E Sbjct: 1 MYATASQMADILGMSKQNLAKLTQKG--ILTREENESDLPYNVQNTIQAYALRMREQAAG 58 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + + + ER R T +A+ E+K A EV+ +R Sbjct: 59 R-------------SGGGEYDLVSERARETYHKANLAEIKAAEARKEVISRNLILSAWAR 105 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167 + S L G+ ++++ P L + ++ + ++ + A+ E Sbjct: 106 VMATSRSRLLGLGSRLRKQMPSLTDEQIEIIDNEVHSTLEHLASGGE 152 >UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A9C3K6_DELAS Length = 180 Score = 58.0 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +++ + A + G S + +G+ V G G+E L Y ER + + Sbjct: 11 ISQAEFAALIGVSEARVSQLVSEGVIV--RGDTGHEWLLG-------YCERLRDQAAGR- 60 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + L + ER L R+Q +AQ+LKNA E VL + Sbjct: 61 ----------ASAGLGGLDLVQERAALARSQREAQDLKNAVARGEFAPIGALADVLGLAS 110 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171 + +D I +++ P+L + R + A N+ + + G Sbjct: 111 SAVVDRMDQIEGQLRKACPDLPEDARVTVLRVLADARNEWIRVTSKLIG 159 >UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodobacter sphaeroides RepID=B9KUZ5_RHOSK Length = 218 Score = 56.1 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 56/163 (34%), Gaps = 7/163 (4%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +N+ QLA F S TI W QGMPV+ G G + W ERDA K Sbjct: 29 LNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCYAWRMERDARARAAKA 88 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTR------AQADAQELKNARDSAEVVETAFCTF 116 + + A E LT ++A+ + A ++V Sbjct: 89 QGDRLAAQAALAFRNLDEDQAEEEAELTADDLKKWSEAEYHRNRVAEQRGDLVRAGRMRE 148 Query: 117 VLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 +L + + LD +P + F L V L+ A Sbjct: 149 LLEELMVSFGNALDTLPDFCELNF-SLSAEQVAKLQERCDAAR 190 >UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VBF6_9RHOB Length = 218 Score = 54.2 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 9/165 (5%) Query: 3 VNKKQLADIFGASIRTIQNWQ---EQGMPVLRGGGKGNEVLYDSAAVIKWYAER-----D 54 VN+ QLA S TI W E +PVL GG G E + A W R Sbjct: 24 VNRYQLAQAMDVSEPTITKWLQDLENPLPVLEVGGNGREYKFRLADCYAWRMARNDAEQL 83 Query: 55 AEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC 114 A+ E + ++ L + ++ P + R A AD + A E+V + Sbjct: 84 AKDEASRSAAQLALLFRNADDGTDPESFLTARQVKDEADADYARNRAAELRGELVRASRV 143 Query: 115 TFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 + + E + + F L+ VD ++R + + Sbjct: 144 EELFELMIDEFKKSATTLADFCEMEFG-LDPAEVDKIQRRADEVL 187 >UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD Length = 193 Score = 51.8 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 13/179 (7%) Query: 2 EVNKKQLADIFGA-SIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 + +KQ+A + G S R ++N +G+ G G D I Y A+ Sbjct: 10 KFTQKQIATLLGLESDRQVRNLINKGILPAXKGRNG----MDPLKCIHAYIAYKAQ-AGG 64 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + + E ER R Q A+ ++N ++ T C + S Sbjct: 65 NAETGTD-----FDGAEPEVDYEVERALNVREQRRARRIQNELALKTLIPTDVCIHIYSS 119 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179 + S + I P L + L+ + +A+ + DE IP L Y+++ Sbjct: 120 LVAAARSKVLAIEGKATTELPGLSVKDRQVLRGLLYEALADLS--DEPIPSSLRAYLDE 176 >UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D597_9RHOB Length = 208 Score = 51.5 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 6/164 (3%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWY-----AERDA 55 M VN++Q A S I + EQG+PVL G G + + V W A R Sbjct: 21 MTVNRRQCATALDVSEPMITRYLEQGLPVLSRGSNGQAYEFQLSEVYAWKMWRDAAARKQ 80 Query: 56 EIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115 + E+ ++ L + + + + A AD + K A E+ T+ Sbjct: 81 DEAAEQAAMQMRMLFRNDDDEESGAGTLTAQEIAQEADADYKRNKAAELRGELTRTSRVR 140 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 V + E + + + + F L V+ ++R A+ Sbjct: 141 EVFEEVLVEFRNQVTTLVDFAEMEF-SLAPDQVEKMQRRCDAAL 183 >UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A9IRX2_BORPD Length = 147 Score = 48.8 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 4/126 (3%) Query: 43 SAAVIKWYAERDAEIENEKLRREVEELLQA--SETDLQPGTIEYERHRLTRAQADAQELK 100 SA I+ AE+ + + ++A + ++ ER RL RAQAD EL+ Sbjct: 10 SARRIRQLAEQGTLERVGRNEYALGPSIRALIDDAAGTGSVLQRERTRLVRAQADEAELR 69 Query: 101 NARDSAEVVETAFCTFVLSRIAGEIASILDGIPLS-VQRRFPEL-ENRHVDFLKRDIIKA 158 A V V + G I + + +P V + E E+R L+ +II+A Sbjct: 70 LAEAKKLVAPIEQYAEVWAHRCGIIRANMLNVPGRVVSQLLGENDESRFKATLRAEIIEA 129 Query: 159 MNKAAA 164 + +A Sbjct: 130 LKASAD 135 >UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973662 Length = 185 Score = 48.4 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 11/149 (7%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A +FG ++R +Q ++G+ +GN Y+ A I+ Y + ++ K + E E Sbjct: 15 IASLFGVTVRRVQQLTQEGIISTTKTKEGN--RYELAPTIQRYVKYLSDKAYGKSKSEKE 72 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 L+ + + L +Q + LK S + ++ SR Sbjct: 73 AELREQKLQAEIA--------LKESQGEMHRLKTEIASGKYIDIEEVKMDYSRFFVSFKK 124 Query: 128 ILDGIPLSVQ-RRFPELENRHVDFLKRDI 155 +P + R + + +++D+ Sbjct: 125 FALSLPSRLSGRISGHCDPMEIRSIEKDL 153 >UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=B6IPX8_RHOCS Length = 196 Score = 48.0 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 19/130 (14%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A + S R +Q +G+ G YD ++ Y ++ Sbjct: 11 IAKLLDLSERRVQQLSREGVIPKAERG-----AYDLVGAVRGYVRYLRDL---------- 55 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 A + ER RL +A+AD EL + ++V A + + + + Sbjct: 56 ----AQRAQGGVADLPTERTRLVKAKADLAELDAQQRRGDLVPVAETALAWAAVTARLRA 111 Query: 128 ILDGIPLSVQ 137 L +P + Sbjct: 112 RLITLPDKLA 121 >UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141S7_BURXL Length = 215 Score = 47.2 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 60/180 (33%), Gaps = 23/180 (12%) Query: 3 VNKKQLADIFGASIRTIQNW--QEQGMPVLRGGGKGNEVLYDSAAVIKWYA--------- 51 + K L + G + + + PV + G + +D AAV + Sbjct: 27 IGKAALCEALGWTRPRLDRRLDGDGNFPVAKRGTRAGGWEFDLAAVRTYLGVAPKEAGEP 86 Query: 52 --ERDAEIENEKLRREVEELLQASETDLQPGTIE--------YERHRLTRAQADAQELKN 101 ++ + + T + P +E R R QA+ E K Sbjct: 87 TPAPASKTQGRAPIDSRTPFAEPKYTVVPPAGVEPVVHAGEQTARQRRDAVQAEILEDKL 146 Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRR--FPELENRHVDFLKRDIIKAM 159 RD E+V+ VL+ + + LD + V R PE + + D+ +AM Sbjct: 147 RRDRGELVQVEVMRQVLNTMLAHLGKGLDRLSDQVVERCGLPEEYADQIRAVTDDLRRAM 206 >UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q6ZE75_SYNY3 Length = 177 Score = 47.2 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 13/128 (10%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66 +LA G S+RT+Q W + G +G YD +WY LR+++ Sbjct: 3 ELAQEAGVSVRTVQTWAKAGYFSKQG-----SNAYDILGYYRWYTR--------SLRQDL 49 Query: 67 EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 +E R R + A+A EL+ +VV + ++ Sbjct: 50 DEHKAKVARSDWDTKWREGRARKSLAEASLVELQMQSKVKQVVPIDLVISEIDKVLSSSI 109 Query: 127 SILDGIPL 134 + +P Sbjct: 110 RLFRDLPS 117 >UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACG7_9GAMM Length = 181 Score = 47.2 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 12/131 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V Q A + N V G + Y + + E+ + ++ Sbjct: 10 VTSTQAAAFLDVTKSRFFN-----CGVKPAAKIGRQNYY----CPRELRLKALELASRRV 60 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + SE E +R R +A+ADA E+KN ++ F +LS +A Sbjct: 61 TSDAPDKAEVSEA---RHRFEIDRARKIKAEADAIEMKNEVRRNNLIPLRFMEILLSGVA 117 Query: 123 GEIASILDGIP 133 + LD IP Sbjct: 118 TDFRQFLDQIP 128 >UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUY4_9PLAN Length = 180 Score = 46.1 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 25/160 (15%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 + + A FG + RTI+ W+ +G PV+ G Y A+ +W Sbjct: 18 TQARAAAFFGVNPRTIKEWRRRGAPVIETGIANAPYRYALGAISQWLIA----------- 66 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAE---VVETAFCTFVLSR 120 E QA++ + ER +L + Q A +L N + +V T C + + Sbjct: 67 ---EREAQAAKEAPSASGSDLERQKL-QEQVRALQLGNDLRQTKYVRLVNTLVCRKAVEK 122 Query: 121 IAG----EIASILDGIPLSVQRRFPELENRHVDFLKRDII 156 +I + + +P + P ++ D L+ + Sbjct: 123 TFKWSCDKIRNRCESLPSEIVATMP---AKYRDDLQEEAA 159 >UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP Length = 233 Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%) Query: 1 MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAER 53 M +N QLA+ FG + +++W +G+P +R G+ +++D A V+ W AER Sbjct: 1 MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAER 51 >UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKR1_9BACT Length = 176 Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 43/152 (28%), Gaps = 20/152 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++ K+ A FG + +T+ W+ G P G +D V +W + + Sbjct: 18 LSTKRCAAFFGVTSKTMSEWKRSGCPQAGRG------WWDPEEVYRWRCGLETD------ 65 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +A+A +E++ + + Sbjct: 66 --------SPDNDGNWQAVKLKAEAEYRKAKAAQEEIRLKVLEGRYIPFEQVEDAWADRL 117 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRD 154 + + G ++ + ++ + + Sbjct: 118 VICRTNMFGWVNTLPPLLEGMSRTEMEKILGE 149 >UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter oxydans RepID=Q5FNI0_GLUOX Length = 200 Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%) Query: 3 VNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 +NK Q+A S+ T+ NW ++ P G G ++ AV + A R E E Sbjct: 9 LNKAQMAKRLKVSLPTLTNWIDRWPDFPADHRGTNGKSWRFNPHAVFDFLAARREEEEKA 68 Query: 61 KLRREVEELLQASETDLQPGTIEYERHR---LTRAQADAQELKNARDS-----AEVVETA 112 + R+ + + + D E T+ Q D L++ + ++V Sbjct: 69 TIGRDEKLMELQLQFDDLFAEEEQPARSGFVSTKEQIDIWRLRDLKRKEAERCGKLVIAD 128 Query: 113 FCTFVLSRIAGEIA 126 +++ +A Sbjct: 129 QMQDMMATAFAMLA 142 >UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax=Rhizobium etli Kim 5 RepID=UPI000190538F Length = 126 Score = 44.1 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 10/96 (10%) Query: 38 EVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQ 97 D V++W +R EI E+ + + + R AQA Sbjct: 1 SWELDLGDVVRWLEDRAGEIAAERFGASEDGKTSE----------DEAKRRRAVAQAVVA 50 Query: 98 ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133 EL V+ A + S I L IP Sbjct: 51 ELDMLERLRSVIPIADVLDLWSTDYAAIRDKLMSIP 86 >UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LD26_ECO55 Length = 173 Score = 43.8 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 32/167 (19%) Query: 7 QLADIFGASIRTIQ-NWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65 ++A+ G + T+ W ++GMP + K + +W Sbjct: 9 EIAERMGVNDSTVSREWAKRGMPHPKKASK--------KEIDQWI--------------- 45 Query: 66 VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 + ++Q IE E+ R +AD E++ + +V+ T + T L+ + Sbjct: 46 LINIIQPLRNTDVKEQIEKEKLRKISLEADLVEIELNISTEKVLSTDYVTQTLTGYFAAL 105 Query: 126 ASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 +L IP S+ E E+ +K + +DE + GL Sbjct: 106 RGVLRSIPASIYVELFESEDADTLRIKLE--------ERIDEKLRGL 144 >UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Escherichia coli SE11 RepID=B6I861_ECOSE Length = 188 Score = 43.4 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 66/175 (37%), Gaps = 19/175 (10%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++ ++A S R +++ + G PV +G G W + L Sbjct: 3 SQAEVAAHLLLSDRRLRDLAKLPGAPVPQGRG-------------DWELDAWRHFYIHYL 49 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEV-----VETAFCTFV 117 R + + E ++ + E R + + + + + AR + + Sbjct: 50 RSNRRDTVGTDEPEVGDNSPEKNREQWLKNEERQERILMARVKRRILAKRYAPIELISVA 109 Query: 118 LSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 +SR+A E+ + ++ P +++ +PE+ L+ ++ A+N+ A + Sbjct: 110 VSRVAVELRTRVESWPPRLKKVWPEMPQEASSVLREELAIALNELADIRVDFSDY 164 >UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3T3_DESRM Length = 183 Score = 42.6 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 27/169 (15%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V +LA I G S I+ G+ G GK YD A+ ++ Y + +++ Sbjct: 9 VGTSELALILGLSDSRIRQLDRSGIITKVGRGK-----YDLASAVQGYCNYLKDAASQEG 63 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E+ L R + EL+ E+ VL+ + Sbjct: 64 LS--------------------EKDLLDRTRRKKLELEIQIMQGELHRAEDVKRVLNDML 103 Query: 123 GEIASILDGIPLSVQ-RRFPELE-NRHVDFLKRDIIKAMNKAAALDELI 169 G + IP + + + E + +K+ I +A+++ + + + Sbjct: 104 GAFRARCLAIPHKLAPQLLGKKELPSIQEGIKKAIYEALSELSDYNPRV 152 >UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J9F0_AGRRK Length = 214 Score = 42.2 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 18/171 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 + K L+ + S+RT+++ + V LY + + + + Sbjct: 53 QCTKADLSVLMNVSMRTLRDLDSREKLVRAP----KSGLYMTVPTLNACWAHIRLVAAGR 108 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++ ER + + +E+ +EV+ S Sbjct: 109 VKEAESPHA-------------TERLKSATVERQIREIALKNLKSEVLTLEEIDGAWSTF 155 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM-NKAAALDELIPG 171 A ++ +++ +P V+ R P + + L+ + + + AA +D + G Sbjct: 156 ASQLKAVMLAVPGKVRSRIPHITAHDQETLRTIVKDMLVDLAAEVDASVIG 206 >UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383339 Length = 110 Score = 41.8 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 3 VNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 V+ +LA + G TI +W ++ G+PV+RGG G E D A + W + + Sbjct: 27 VSITELAALTGYHRDTISDWVKRWGLPVVRGGAHGIEYQIDVRAFVDWPEAQAKAEALKN 86 Query: 62 LRR 64 Sbjct: 87 APA 89 >UniRef50_A6XRQ1 Putative uncharacterized protein n=1 Tax=Vibrio cholerae AM-19226 RepID=A6XRQ1_VIBCH Length = 171 Score = 41.8 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 59/149 (39%), Gaps = 13/149 (8%) Query: 31 RGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLT 90 GGGKG ++ +S I+W +R+ + + + +E T + GT + E LT Sbjct: 14 GGGGKGKPLVIESEKAIQWIIDREVQKQIGQFEKE--------RTAPKVGTKDGEDLLLT 65 Query: 91 RAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFP--ELENRHV 148 A+ E++ + V++ L + + LDGI + Sbjct: 66 AAKRRKAEVEAKKAEEAVMDLGEIAQFLYMVGNLFGNELDGIGARTALEVSSEHEPAKCK 125 Query: 149 DFLKRDIIKAMNKAAALDELIPGLLSEYI 177 + + R+ + + A + + ++EY+ Sbjct: 126 NIIDRESRRIRSATA---DRLSAFVAEYL 151 >UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9W3_GEMAT Length = 169 Score = 41.1 bits (94), Expect = 0.019, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 19/133 (14%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMP-VLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++ Q+A I G + TI+ ++G P V G +G + D+ + W+ ER+ EK Sbjct: 8 SQTQMAAILGVTSPTIRAAIDEGAPGVHAQGSRGTKGKIDATQFVPWWIERERSRAREKD 67 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + ++ IE +R +L + E + A L +A Sbjct: 68 KGQSQAAIER------ELDIEMKREKLLKE------------KREALPRAVMVNTLRDVA 109 Query: 123 GEIASILDGIPLS 135 + + +P Sbjct: 110 TRLNVTITQMPDR 122 >UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY59_RUMGN Length = 180 Score = 40.7 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 18/169 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 M+VN+K+LA I G + R ++ + + G+ + + Y + Y E E Sbjct: 1 MDVNQKELAAILGITDRRVRQLKNEFGLFSKGLSSEKKQKNYVLEKCVPEYINYKLEAEV 60 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 ++ E E+ + + LK + E+ E L+ Sbjct: 61 QQG---------------TGYNKEKEQAEHEQIKKKISILKLRKLKRELHEADDVEEFLT 105 Query: 120 RIAGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 + + L +P V + N +D L+R+I + + + + D Sbjct: 106 DMLVNFKNRLLSVPQKVAPLIVSEDDVNVILDILEREIFQTLEELSEYD 154 >UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B657_METEA Length = 105 Score = 39.9 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVL-RGGGKGNEVLYDSAAVIKWYAER 53 + ++AD+ G S T+ W GMP G L D ++W R Sbjct: 36 SASKVADLLGVSRATVAKWIRDGMPTEGSEPAPGKPYLIDIGIAVRWLQGR 86 >UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteurellaceae RepID=B8F4L1_HAEPS Length = 170 Score = 39.9 bits (91), Expect = 0.038, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 24/163 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 +++N Q+A++ G +T+ P L K LY +I Sbjct: 22 LKLNINQIAEVTGLHRQTVSQRVAGLTPSLGSNSKLK--LYSLRDLI------------- 66 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 L +E R QA+ + LK R++ E++ + +S Sbjct: 67 --------LTGLTEKMSADVDSLSPNDRRAFWQAENERLKYERETRELIPAFEVSQEMSI 118 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +A + L+ +P ++R L+ + + +++ I ++ A Sbjct: 119 LAKAVVQTLETLPDILERDCG-LQPKDLIRVQQVIDDIRDQMA 160 >UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B7LNB9_ESCF3 Length = 172 Score = 39.9 bits (91), Expect = 0.039, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 67 EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 E L + + +L R Q++ + LK +++ E++ + + + +A + Sbjct: 58 ELLGRTTTPELVAVDKMTPPDRKAWFQSERERLKFQQETGELIPASEVSREFASMAKAVV 117 Query: 127 SILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +L+ +P ++R + V +++ I ++ A Sbjct: 118 QVLETLPDILERDCA-MTPSAVVRVQKVIDDLRDQIA 153 >UniRef50_D1YLG3 Conserved domain protein n=2 Tax=Lactobacillus gasseri 224-1 RepID=D1YLG3_9LACO Length = 104 Score = 39.9 bits (91), Expect = 0.042, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +N+K++A FG + TI W GMP+ G+ LY ++ +W ++ + + Sbjct: 35 LNRKEVAKYFGVADSTISYWATLGMPIAVIDGR---KLYGKQSITEWLKSKEQPKKEQNK 91 Query: 63 R 63 + Sbjct: 92 K 92 >UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Streptomyces phage mu1/6 RepID=Q1WDJ1_9CAUD Length = 81 Score = 39.9 bits (91), Expect = 0.042, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + ++Q+ +G S T+ W +G PV+R +D A V W AE+ A ++ Sbjct: 12 LQQQQVQAHYGVSDWTVNQWVRKGCPVVRLPNGHR--RFDLAEVKAWMAEQSATGREQRR 69 Query: 63 RREVEELLQAS 73 R+ L Q S Sbjct: 70 RQSEHALSQRS 80 >UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francisella RepID=A0Q4V8_FRATN Length = 174 Score = 39.1 bits (89), Expect = 0.071, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 19/164 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V+ L++ R IQ Q +L+ GK Y + Y + K Sbjct: 8 VSSGVLSEYLSIGERRIQQLTSQD--ILKKTGK---NQYPLKENVNRYIAYLQDRAGGKS 62 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +E+ + ++ RLT+ QAD Q++K +VV L+ + Sbjct: 63 EQEL------------NIEFKKQKLRLTKFQADEQQVKAELAQKKVVAVNDVISSLADLF 110 Query: 123 GEIASILDGIPLSVQ-RRFPELENRHVD-FLKRDIIKAMNKAAA 164 + L IP + F E + + L +I +A+ + Sbjct: 111 ALMREKLLNIPERAEYEIFGETDKDIFNQKLSTEIKEALFEICD 154 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS... 178 9e-44 UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS... 158 6e-38 UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431... 142 5e-33 UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter... 131 1e-29 UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH 126 4e-28 UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI... 123 2e-27 UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1... 122 6e-27 UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep... 117 1e-25 UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio ... 117 2e-25 UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID... 115 8e-25 UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E... 113 3e-24 UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of termi... 109 5e-23 UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba... 107 2e-22 UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ... 101 1e-20 UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD 99 3e-20 UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom... 98 1e-19 UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenz... 98 2e-19 UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term... 97 3e-19 UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodoba... 95 2e-18 UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreic... 93 3e-18 UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ... 93 4e-18 UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomi... 93 6e-18 UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodoba... 92 7e-18 UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitroba... 91 1e-17 UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalk... 90 3e-17 UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of termi... 89 6e-17 UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethios... 88 1e-16 UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=... 88 2e-16 UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae... 86 6e-16 UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term... 84 2e-15 UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk... 83 3e-15 UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkhol... 83 4e-15 UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkhol... 79 9e-14 UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass... 75 1e-12 UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congreg... 73 5e-12 UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax... 70 3e-11 UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastop... 68 1e-10 UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkhol... 68 2e-10 UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter ... 67 2e-10 UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphapr... 67 3e-10 UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax... 57 3e-07 UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei... 44 0.002 Sequences not found previously or not previously below threshold: UniRef50_A8SB65 Putative uncharacterized protein n=1 Tax=Faecali... 69 5e-11 UniRef50_B1HTP3 Putative uncharacterized protein n=1 Tax=Lysinib... 69 7e-11 UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfo... 66 5e-10 UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylo... 66 6e-10 UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 9e-10 UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Esc... 63 6e-09 UniRef50_C7H6G3 Putative uncharacterized protein n=2 Tax=Clostri... 62 8e-09 UniRef50_B0PEX8 Putative uncharacterized protein n=1 Tax=Anaerot... 61 2e-08 UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francis... 60 4e-08 UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Ma... 59 5e-08 UniRef50_C9MV79 Transcriptional regulator, MerR family n=2 Tax=F... 58 1e-07 UniRef50_C2BG35 Putative uncharacterized protein n=1 Tax=Anaeroc... 58 2e-07 UniRef50_Q0BEI9 Putative uncharacterized protein n=11 Tax=Burkho... 56 5e-07 UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root Re... 54 3e-06 UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobac... 53 5e-06 UniRef50_B6IMM8 Putative uncharacterized protein n=1 Tax=Rhodosp... 53 7e-06 UniRef50_A8GLM5 Putative uncharacterized protein n=1 Tax=Serrati... 52 7e-06 UniRef50_A5V8D7 Putative uncharacterized protein n=1 Tax=Sphingo... 51 2e-05 UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax... 50 3e-05 UniRef50_B8L8I9 Putative uncharacterized protein n=1 Tax=Stenotr... 49 9e-05 UniRef50_A9C2C3 Putative uncharacterized protein n=1 Tax=Delftia... 48 1e-04 UniRef50_B0P604 Putative uncharacterized protein n=1 Tax=Anaerot... 48 1e-04 UniRef50_A5Z445 Putative uncharacterized protein n=1 Tax=Eubacte... 48 2e-04 UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escheri... 48 2e-04 UniRef50_D1Y312 Putative uncharacterized protein n=1 Tax=Pyramid... 47 3e-04 UniRef50_A7MG09 Putative uncharacterized protein n=1 Tax=Cronoba... 47 4e-04 UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteur... 45 0.001 UniRef50_A4U1Y8 BACTERIOPHAGE-RELATED PROTEIN n=2 Tax=Magnetospi... 45 0.001 UniRef50_Q2SAJ6 Putative uncharacterized protein n=2 Tax=Proteob... 45 0.001 UniRef50_C7G5Z1 Putative uncharacterized protein n=1 Tax=Rosebur... 45 0.001 UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmati... 45 0.001 UniRef50_C0PVV4 Gifsy-2 prophage protein n=12 Tax=Salmonella ent... 44 0.002 UniRef50_D0H0S3 Putative uncharacterized protein n=1 Tax=Vibrio ... 44 0.002 UniRef50_C8TRT6 Predicted terminase small subunit n=10 Tax=root ... 44 0.002 UniRef50_B0U9E3 Putative uncharacterized protein n=1 Tax=Methylo... 44 0.002 UniRef50_A8A1J3 Putative membrane protein n=2 Tax=Escherichia co... 44 0.002 UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterob... 44 0.003 UniRef50_B2JD13 Putative uncharacterized protein n=2 Tax=Burkhol... 44 0.003 UniRef50_Q89JP3 Bll5240 protein n=1 Tax=Bradyrhizobium japonicum... 43 0.004 UniRef50_B3H0X8 Putative uncharacterized protein n=4 Tax=Pasteur... 43 0.005 UniRef50_Q48KF6 Putative uncharacterized protein n=1 Tax=Pseudom... 43 0.006 UniRef50_Q31QA7 Putative uncharacterized protein n=2 Tax=Synecho... 43 0.006 UniRef50_A0NRU5 Putative uncharacterized protein n=1 Tax=Labrenz... 43 0.007 UniRef50_B2UKQ5 Putative uncharacterized protein n=1 Tax=Akkerma... 43 0.007 UniRef50_C1CPH0 Transcriptional regulator, AlpA family n=4 Tax=S... 43 0.007 UniRef50_Q830E1 Conserved domain protein n=7 Tax=Enterococcus fa... 42 0.008 UniRef50_Q2W853 Putative uncharacterized protein n=5 Tax=Proteob... 42 0.008 UniRef50_D1AA53 N-6 DNA methylase n=1 Tax=Thermomonospora curvat... 42 0.008 UniRef50_Q53574 Putative uncharacterized protein orf G n=1 Tax=S... 42 0.010 UniRef50_Q72FM0 Putative uncharacterized protein n=3 Tax=Desulfo... 41 0.015 UniRef50_C8NRQ9 Putative uncharacterized protein n=2 Tax=Coryneb... 41 0.015 UniRef50_Q72A11 Putative uncharacterized protein n=2 Tax=Desulfo... 41 0.016 UniRef50_A3LLS2 Putative uncharacterized protein n=1 Tax=Pseudom... 41 0.022 UniRef50_C7Q3S9 Transcriptional regulator, MerR family n=1 Tax=C... 41 0.024 UniRef50_B4CXQ2 Putative uncharacterized protein n=1 Tax=Chthoni... 41 0.024 UniRef50_Q87B59 Phage-related protein n=7 Tax=Xylella fastidiosa... 41 0.025 UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylo... 41 0.026 UniRef50_C6BW00 Putative uncharacterized protein n=1 Tax=Desulfo... 41 0.027 UniRef50_Q1IL58 Putative prophage repressor n=1 Tax=Candidatus K... 40 0.028 UniRef50_C4S5Y0 DNA-directed RNA polymerase, sigma subunit (Sigm... 40 0.031 UniRef50_Q6VY86 Putative uncharacterized protein n=1 Tax=Strepto... 40 0.041 UniRef50_A0L9B4 Putative uncharacterized protein n=5 Tax=Proteob... 39 0.050 UniRef50_Q398F6 Putative uncharacterized protein n=1 Tax=Burkhol... 39 0.056 UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1... 39 0.074 UniRef50_B2UKR7 Putative uncharacterized protein n=1 Tax=Akkerma... 39 0.089 UniRef50_C7VU90 Predicted protein n=3 Tax=Enterococcus RepID=C7V... 39 0.095 >UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD Length = 181 Score = 178 bits (450), Expect = 9e-44, Method: Composition-based stats. Identities = 178/181 (98%), Positives = 179/181 (98%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE Sbjct: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLRREVEEL QASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR Sbjct: 61 KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 Query: 181 G 181 G Sbjct: 181 G 181 >UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21 Length = 182 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 93/181 (51%), Positives = 133/181 (73%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M+VNKK+LA+IF RTI+ WQ QG+P G KG E ++D+A I+WYA+R+ +IENE Sbjct: 1 MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 KLR+E+++L A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+ V+ET TF+L R Sbjct: 61 KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 +A EI+ IL +PL++QR++P++ H+D +K +I KA N AA E + G + ++ Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180 Query: 181 G 181 G Sbjct: 181 G 181 >UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15 Length = 168 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 92/179 (51%), Positives = 114/179 (63%), Gaps = 16/179 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +NK +A G S++ W Q + +G EV +D +V+ E + Sbjct: 5 LNKSDMASSLGISVQAFDKWGVQPV-----EKRGREVFFDVRSVVDNRLENQSRKLQPSP 59 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + I+YER RLTRA ADA EL N + EVVETAFCTFVLSRIA Sbjct: 60 GDDDD-----------GVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRIA 108 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181 EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++YI+QSG Sbjct: 109 AEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYIDQSG 167 >UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae RepID=B7ULU1_ECO27 Length = 169 Score = 131 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 14/178 (7%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 ++S LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EYI + Sbjct: 110 MALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 167 >UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH Length = 159 Score = 126 bits (316), Expect = 4e-28, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 16/173 (9%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A G S++ W G+P + +G EVLYD V++ +R+ N++ + Sbjct: 1 MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 EL + + R LT QA AQ+LKN +++++ FC F LS++A ++S Sbjct: 54 ELEE---------RLLRARAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAMALSS 104 Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 LD IPLS+QR+FP+L RH+D LK I K N+ A + +P LL EYI + Sbjct: 105 TLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 157 >UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4 Length = 302 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 18/170 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 E+ LA+I G S R I ++ E+G+ V G + +D ++ Y E I + Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 V+ T+ ER RL R QAD L+NA E+V A I Sbjct: 183 GGDNVD-------------TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171 A + +++ +P ++ P L VD + +I A+ + D+ Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDDDDGS 279 >UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16 Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX Length = 180 Score = 122 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 62/179 (34%), Positives = 103/179 (57%), Gaps = 19/179 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD-AEIENEK 61 +NKK +A S W V KG E YD A+VI+ +++ N+K Sbjct: 6 MNKKNMAKSCRVSATAFDKWG-----VTPVERKGREAFYDVASVIENRVNNAISQLINDK 60 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + +ELL+ R RL AQA+AQELKN RD +V++T FC + LS++ Sbjct: 61 GEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSKL 107 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 A +I+SI+D +PL++QR FP++ +D LKR+++KA N +A + + +P +L++Y++++ Sbjct: 108 ASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLKET 166 >UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE Length = 169 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 11/175 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +NK ++A G S + W Q + G E Y A V++ + A + + Sbjct: 1 MNKSEMASSLGISPQAFDKWGVQPI-----ERIGREAFYTVADVVENRIQHAARKQQPEG 55 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 L + R LTRAQ AQE KN + +V F T+ L++IA Sbjct: 56 E------LPEGVDPYVEAKLMQARLELTRAQTYAQEQKNQVNDKLLVPVPFATYALAKIA 109 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 +I S L+ + +V +R PE++ ++ +R+I A N +A + +PG L EY+ Sbjct: 110 AKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDEYL 164 >UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group RepID=A7MWA4_VIBHB Length = 200 Score = 117 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 8/179 (4%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 + + +A + G S R ++N +QG+ + G G + L + A I + ++ + Sbjct: 10 KFTQLDIATLLGISSRQVRNLTQQGVLPVAKGRNGIDPLACTHAYITYKSQAKTSDSKPE 69 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 +E EE E DL IE R +L +A K L ++ Sbjct: 70 TEQENEEAFAKLERDL---KIEERREKLAMLKA-----KRVLFEKTYAPIDTIVDTLEQV 121 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 + + LD + ++ +P++ V+ L+ I +N+ A + + + ++S Sbjct: 122 CARVGTRLDTLLPKLKNAWPDMPPEAVEVLEAVIAAVLNECADVQPNLSDYIDSDPDES 180 >UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8 Length = 177 Score = 115 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 15/175 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++K L S + W +PV G LY A V+ + + Sbjct: 14 LSKTDLCKSLEISTQAFDKW---DVPV--HSKLGRVCLYKMADVVGNRLANERK------ 62 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + E D ++YER RL RAQA QE+KN +D EVVE F TFVL+RIA Sbjct: 63 ----KTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIA 118 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 +IA +LD I + V+R+FP++ R +D +K ++IK+ N AA L E I GLL EYI Sbjct: 119 AQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYI 173 >UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS8_9ALTE Length = 165 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 24/177 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +N++Q+A ++ W+ + PV R G +V YD+ +V++ Sbjct: 10 LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVLENR------------ 52 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 L + G IE ER RLT AQA+ QELKN ++ T LS +A Sbjct: 53 -------LSKAGPAGSNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179 G A ILD +PL+++R++PEL + ++ +KR +KA N+ + LD ++ L +Y+ + Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDYLNE 162 >UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WZU0_OCHA4 Length = 173 Score = 109 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 10/162 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++K + + S + GMPV R G D A W +E N Sbjct: 20 ISKSGFSKLINVSPGRVSQMITAGMPVERDGK------IDVARCKLWISEN----INPTR 69 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + Q ++ ER RL +AQADA ELKNA E+V + + S Sbjct: 70 AASQAQGATLFGEEKQAISLTAERARLAKAQADAVELKNATIRRELVSASEVERLWSGEW 129 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 ++ S + +P +++ P L ++ + ++ + + + Sbjct: 130 MQLRSSVLAVPSRLRQLLPHLTAEDIEAIDGELRRMLTEFGN 171 >UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKR3_NITHX Length = 182 Score = 107 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 17/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 EV+ K+LA++FG S R+++ ++G G+ Y ++ Y + + Sbjct: 10 EVSAKELAELFGISDRSVRELHDRGTVKKSARGR-----YLLTESVQLYTAHLRGVAAGR 64 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + ER RL + QADA LKNA E+V + + Sbjct: 65 GGE------------GGVLDLTVERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112 Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168 ++ S + +P V++ P L D + R+I A+ A D Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLADNDSD 159 >UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa RepID=Q87CG5_XYLFT Length = 191 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 +VN+ L++IFG ++ T+ W G PV++ GG+G E +D+A V +W ++ AE Sbjct: 24 QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++EE + R A+A +EL A +V L+R+ Sbjct: 84 AVADIEEW----------------KRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARV 127 Query: 122 AGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 E+ + L IP E R+ L ++I + + A+LD Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174 >UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD Length = 193 Score = 99 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 13/179 (7%) Query: 2 EVNKKQLADIFGA-SIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 + +KQ+A + G S R ++N +G+ G G D I Y A+ Sbjct: 10 KFTQKQIATLLGLESDRQVRNLINKGILPAXKGRNG----MDPLKCIHAYIAYKAQ---- 61 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 E + E ER R Q A+ ++N ++ T C + S Sbjct: 62 --AGGNAETGTDFDGAEPEVDYEVERALNVREQRRARRIQNELALKTLIPTDVCIHIYSS 119 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179 + S + I P L + L+ + +A+ + DE IP L Y+++ Sbjct: 120 LVAAARSKVLAIEGKATTELPGLSVKDRQVLRGLLYEALADLS--DEPIPSSLRAYLDE 176 >UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI8_POLNA Length = 168 Score = 98.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 61/174 (35%), Gaps = 27/174 (15%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 ++Q+A +FG + +TI WQ G P+ GG G YDS A I W R+ Sbjct: 5 GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGRE--------- 55 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + E + RL+R Q D E RD ++ + + Sbjct: 56 -------------VSKIRSETPKDRLSRLQGDKIERDMMRDDGLLIPASEIEPMWEGAVI 102 Query: 124 EIASILDGIPLSVQ-----RRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 L G P + P LE + ++K N AA+ + G Sbjct: 103 AAREYLLGEPPRIASLSIGMEKPALEELLRTTFEAYLVKLSNWRAAMQDDDEGK 156 >UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QS27_9RHOB Length = 166 Score = 97.6 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 15/167 (8%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M Q+ADI G S + + ++G +L +++ Y+ I+ YA R E Sbjct: 1 MYATASQMADILGMSKQNLAKLTQKG--ILTREENESDLPYNVQNTIQAYALRMREQAAG 58 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + + ER R T +A+ E+K A EV+ +R Sbjct: 59 RS-------------GGGEYDLVSERARETYHKANLAEIKAAEARKEVISRNLILSAWAR 105 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167 + S L G+ ++++ P L + ++ + ++ + A+ E Sbjct: 106 VMATSRSRLLGLGSRLRKQMPSLTDEQIEIIDNEVHSTLEHLASGGE 152 >UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI Length = 163 Score = 96.8 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 69/184 (37%), Gaps = 27/184 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGG-KGNEVLYDSAAVIKWYAERDAEIEN 59 M+VNK+QLADI G + + + NWQ++G+PV G YD+ AVI+W +R+ E N Sbjct: 1 MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANEYDTVAVIRWMFQRELERLN 60 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 E R RL R +A+ EL+ ++ A Sbjct: 61 ----------------------KEKPRDRLDRVKAELAELERDEKLGQLAPAAMFERAWG 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYI 177 + +P + + D + I +A+ K + G + Sbjct: 99 DHVLAARTEFLTMPEQLAAELTATSGVEIDPDTIAAYINRALEKLSNYGAENDG--DDSR 156 Query: 178 EQSG 181 +G Sbjct: 157 NHAG 160 >UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VBF6_9RHOB Length = 218 Score = 94.5 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 9/165 (5%) Query: 3 VNKKQLADIFGASIRTIQNWQE---QGMPVLRGGGKGNEVLYDSAAVIKWYAER-----D 54 VN+ QLA S TI W + +PVL GG G E + A W R Sbjct: 24 VNRYQLAQAMDVSEPTITKWLQDLENPLPVLEVGGNGREYKFRLADCYAWRMARNDAEQL 83 Query: 55 AEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC 114 A+ E + ++ L + ++ P + R A AD + A E+V + Sbjct: 84 AKDEASRSAAQLALLFRNADDGTDPESFLTARQVKDEADADYARNRAAELRGELVRASRV 143 Query: 115 TFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 + + E + + F L+ VD ++R + + Sbjct: 144 EELFELMIDEFKKSATTLADFCEMEFG-LDPAEVDKIQRRADEVL 187 >UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D597_9RHOB Length = 208 Score = 93.4 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 6/164 (3%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWY-----AERDA 55 M VN++Q A S I + EQG+PVL G G + + V W A R Sbjct: 21 MTVNRRQCATALDVSEPMITRYLEQGLPVLSRGSNGQAYEFQLSEVYAWKMWRDAAARKQ 80 Query: 56 EIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115 + E+ ++ L + + + + A AD + K A E+ T+ Sbjct: 81 DEAAEQAAMQMRMLFRNDDDEESGAGTLTAQEIAQEADADYKRNKAAELRGELTRTSRVR 140 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 V + E + + + + F L V+ ++R A+ Sbjct: 141 EVFEEVLVEFRNQVTTLVDFAEMEF-SLAPDQVEKMQRRCDAAL 183 >UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15 Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3 Length = 139 Score = 93.0 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 14/140 (10%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + ++A + R ++ Q+ G P+ G D A +Y +N+ Sbjct: 3 TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E D + R LT QA Q+LKN ++++T FC F LS++A Sbjct: 58 DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109 Query: 123 GEIASILDGIPLSVQRRFPE 142 ++S LD IPLS+QR+FP Sbjct: 110 MALSSTLDSIPLSMQRQFPG 129 >UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK71_RHOVA Length = 174 Score = 92.6 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V+ +L++ G S + I+ G+ G+ Y A ++ +A+ Sbjct: 30 VSTFELSEWLGVSNQRIREMARAGLIPTITPGR-----YKLKAAVRAWAD---------- 74 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + Q + + R A AD EL N E++ + + + Sbjct: 75 ----WQRTSRPGMGSQSLALTAAKTRAAEATADKLELHNQAARRELIAASDVERAWATVL 130 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166 ++ + + +P VQ+R L + + +I A+++AA + Sbjct: 131 RDVRAGMLSVPSRVQQRMGHLTKHDILAIDAEIRTALSEAAHAE 174 >UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodobacter sphaeroides RepID=B9KUZ5_RHOSK Length = 218 Score = 92.2 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 56/163 (34%), Gaps = 7/163 (4%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +N+ QLA F S TI W QGMPV+ G G + W ERDA K Sbjct: 29 LNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCYAWRMERDARARAAKA 88 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTR------AQADAQELKNARDSAEVVETAFCTF 116 + + A E LT ++A+ + A ++V Sbjct: 89 QGDRLAAQAALAFRNLDEDQAEEEAELTADDLKKWSEAEYHRNRVAEQRGDLVRAGRMRE 148 Query: 117 VLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 +L + + LD +P + F L V L+ A Sbjct: 149 LLEELMVSFGNALDTLPDFCELNF-SLSAEQVAKLQERCDAAR 190 >UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW78_9BRAD Length = 151 Score = 91.4 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V KQLAD+ G + ++ Q+ G+ G K Y I+ Y E + + + Sbjct: 5 VTAKQLADLIGITTEHVRRHQQAGVVFKTGRDK-----YLLRESIRGYCEHLRGVASGRG 59 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 D T+ ER R R AD LKNA E+V + I Sbjct: 60 G------------DSAVATLTAERARQAREHADNTALKNAALRKELVPATDVVRGWADIL 107 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLK 152 ++ + L +P V ++ P L + + Sbjct: 108 TKVRAALLAVPSRVWQQAPHLTAEDKNIID 137 >UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR38_9GAMM Length = 181 Score = 90.3 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 17/169 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 + + K ++A S T+ W ++G PV G G +D AAV+ W +R Sbjct: 3 LRLTKAEMAKALDVSTNTVGAWVKRGCPVQEQGRPGKPYTFDLAAVVSWLTDR------- 55 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + + ER L R + A EL+ R VV+ A ++ Sbjct: 56 ------PAAAGSEAEAEDAASYRAERAALMRVRRQAAELEYQRQRRAVVDRAKAKRLIHE 109 Query: 121 IAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIKAMNKAAAL 165 I +A P V R L R + + + A Sbjct: 110 IGQALAKPWAQWPARVYAEIAAELQADGARVHQVLDRHVHRHLEDLARA 158 >UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of terminase-like protein n=2 Tax=Rhodobacter RepID=A4WNS7_RHOS5 Length = 163 Score = 89.1 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 + + L ++ + + + +++G+ V RG YD AA + Y I Sbjct: 15 LRIGASDLCELLSLTPGALSDLKKRGIAVHRGHD-----AYDLAATVTAYVVHLRGIAAG 69 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + E ++ ER RL + QADAQ LKN E+V + S Sbjct: 70 RGGEE------------HTASLTAERARLAKEQADAQALKNGALRGELVAASEVERAWSD 117 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166 ++ S + +P + R+ L VD L R++ A+ + D Sbjct: 118 TLRKVRSRILAVPSRL-RQVVTLAPAEVDALDRELRDALMELGNAD 162 >UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKR1_9BACT Length = 176 Score = 88.3 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 46/157 (29%), Gaps = 20/157 (12%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++ K+ A FG + +T+ W+ G P G +D V +W + + Sbjct: 18 LSTKRCAAFFGVTSKTMSEWKRSGCPQAGRG------WWDPEEVYRWRCGLETD------ 65 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +A+A +E++ + + Sbjct: 66 --------SPDNDGNWQAVKLKAEAEYRKAKAAQEEIRLKVLEGRYIPFEQVEDAWADRL 117 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159 + + G ++ + ++ + + I+ + Sbjct: 118 VICRTNMFGWVNTLPPLLEGMSRTEMEKILGEEIRIL 154 >UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973662 Length = 185 Score = 87.6 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 15/164 (9%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A +FG ++R +Q ++G+ +G Y+ A I+ Y + ++ K + E E Sbjct: 15 IASLFGVTVRRVQQLTQEGIISTTKTKEG--NRYELAPTIQRYVKYLSDKAYGKSKSEKE 72 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 L+ + L +Q + LK S + ++ SR Sbjct: 73 AELREQK--------LQAEIALKESQGEMHRLKTEIASGKYIDIEEVKMDYSRFFVSFKK 124 Query: 128 ILDGIPLSVQ-RRFPELENRHVDFLK----RDIIKAMNKAAALD 166 +P + R + + ++ +II+ +N Sbjct: 125 FALSLPSRLSGRISGHCDPMEIRSIEKDLNAEIIRLLNSFVVAG 168 >UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST Length = 184 Score = 85.7 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 19/168 (11%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 EVN+ +LA+I G S+ T+ W +G PV++ GG+G +++A V W Sbjct: 12 EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSWR----------- 60 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++ ++A + T + R A+ + EL AR E+V L++ Sbjct: 61 -----DDDIRAQASHTGMATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115 Query: 122 AGEIASILDG-IPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166 GE+ + + +P RR E + L ++ + + A D Sbjct: 116 FGEVRAGIRNVLPSRAARRLIGESDETQIKAVLLDEVDQVLEALADTD 163 >UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH Length = 174 Score = 84.1 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 25/170 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 M+VNKKQLADIFG S RT +Q + P++ G+G YD+ AV + +R Sbjct: 1 MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDR------ 54 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 L E R RL R +A+ + L RD E+V + +L Sbjct: 55 ----------------ALSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDE 167 ++ I + L ++ + V D L +A+ AAL + Sbjct: 99 QVVTAIKTTLLDSNHILKTELDARYDIDVEPDILDEHSRQALTHLAALGD 148 >UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D857_LARHH Length = 171 Score = 83.3 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 24/166 (14%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 VNK++L+ I G S RT+ WQ +GMPV+ G+G+ YD+AAVIKWY R A Sbjct: 5 VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA------- 57 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E + RL R + D E++ A++ +V L + Sbjct: 58 ---------------NGASKESAKDRLDRLRGDQVEIEIAKELRRLVAIDEIEPALGQFV 102 Query: 123 GEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALD 166 + S++ +P E + L+ +I+ + + Sbjct: 103 ADAVSLMAALPDKYTTVISEAVSPDAIHAVLEDMLIELREQLGNYE 148 >UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A9C3K6_DELAS Length = 180 Score = 83.3 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +++ + A + G S + +G+ V G G+E L Y ER + + Sbjct: 11 ISQAEFAALIGVSEARVSQLVSEGVIV--RGDTGHEWLLG-------YCERLRDQAAGR- 60 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + L + ER L R+Q +AQ+LKNA E VL + Sbjct: 61 ----------ASAGLGGLDLVQERAALARSQREAQDLKNAVARGEFAPIGALADVLGLAS 110 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171 + +D I +++ P+L + R + A N+ + + G Sbjct: 111 SAVVDRMDQIEGQLRKACPDLPEDARVTVLRVLADARNEWIRVTSKLIG 159 >UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q141S7_BURXL Length = 215 Score = 78.7 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 23/182 (12%) Query: 3 VNKKQLADIFGASIRTIQNW--QEQGMPVLRGGGKGNEVLYDSAAVIKWYA--------- 51 + K L + G + + + PV + G + +D AAV + Sbjct: 27 IGKAALCEALGWTRPRLDRRLDGDGNFPVAKRGTRAGGWEFDLAAVRTYLGVAPKEAGEP 86 Query: 52 --ERDAEIENEKLRREVEELLQASETDLQPGTIE--------YERHRLTRAQADAQELKN 101 ++ + + T + P +E R R QA+ E K Sbjct: 87 TPAPASKTQGRAPIDSRTPFAEPKYTVVPPAGVEPVVHAGEQTARQRRDAVQAEILEDKL 146 Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRR--FPELENRHVDFLKRDIIKAM 159 RD E+V+ VL+ + + LD + V R PE + + D+ +AM Sbjct: 147 RRDRGELVQVEVMRQVLNTMLAHLGKGLDRLSDQVVERCGLPEEYADQIRAVTDDLRRAM 206 Query: 160 NK 161 Sbjct: 207 AD 208 >UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae RepID=B0ZSE9_9CAUD Length = 191 Score = 74.9 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 11/179 (6%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V+KK A + G S R I W ++GMP GGGKG + D+ I W R+ + Sbjct: 5 VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRREVRRQYGDD 64 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E E+ + G+ E L +A+ + ++ +V +L + Sbjct: 65 DDETEDGV---------GSASAEDRLLKKARREKLQIDIDLARRRLVPLDAVGRILQGVG 115 Query: 123 GEIASILDGIPLSVQRRFP--ELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179 A+ LD + + + + + + + + A + ++ Sbjct: 116 AVFATQLDSLSSRLASDLAVIDDPAKVRERIHAETRRIRGSTAERLNDAASSIVAELDA 174 >UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACG7_9GAMM Length = 181 Score = 72.9 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 12/131 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V Q A + N V G + Y + + E+ + ++ Sbjct: 10 VTSTQAAAFLDVTKSRFFN-----CGVKPAAKIGRQNYY----CPRELRLKALELASRRV 60 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + + SE E +R R +A+ADA E+KN ++ F +LS +A Sbjct: 61 TSDAPDKAEVSEA---RHRFEIDRARKIKAEADAIEMKNEVRRNNLIPLRFMEILLSGVA 117 Query: 123 GEIASILDGIP 133 + LD IP Sbjct: 118 TDFRQFLDQIP 128 >UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q6ZE75_SYNY3 Length = 177 Score = 70.2 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 13/129 (10%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65 +LA G S+RT+Q W + G +G YD +WY ++ Sbjct: 2 TELAQEAGVSVRTVQTWAKAGYFSKQG-----SNAYDILGYYRWYTRSLR--------QD 48 Query: 66 VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 ++E R R + A+A EL+ +VV + ++ Sbjct: 49 LDEHKAKVARSDWDTKWREGRARKSLAEASLVELQMQSKVKQVVPIDLVISEIDKVLSSS 108 Query: 126 ASILDGIPL 134 + +P Sbjct: 109 IRLFRDLPS 117 >UniRef50_A8SB65 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SB65_9FIRM Length = 180 Score = 69.5 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 10/158 (6%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A +F ++R IQ + G+ + G YD I+ Y + ++ + + E Sbjct: 15 IAQLFNVTVRRIQQLTQDGV-LETVRVPGQRNKYDLIPTIQAYVKYLSDKAYGRESKLSE 73 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 L+ L +Q + +LK A S + + R Sbjct: 74 TELRE--------KKLQAETALKESQVELHQLKTAIASGKYISVEEVKLDYQRFFVTFKK 125 Query: 128 ILDGIPLSVQRRFPE-LENRHVDFLKRDIIKAMNKAAA 164 G+P V ++ L+RD+ + +N Sbjct: 126 FAAGLPNRVIGLVGGYVDPVTARTLERDMTQEVNNLLR 163 >UniRef50_B1HTP3 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HTP3_LYSSC Length = 192 Score = 69.1 bits (167), Expect = 7e-11, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 65/167 (38%), Gaps = 19/167 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 VN K +A +F + R ++ E+G+ G+ YD + Y Sbjct: 15 VNTKSIAKMFNMTERNVRYLVEEGVISRVTHGR-----YDLIDTVSRYITFL-------- 61 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + +++YE+ +A+ + E++ A E+ + V + + Sbjct: 62 ----KMSFDGIDESKVMESLDYEKWLHEKAKREKAEIELAHIKKEMHKADEVEKVQNHMV 117 Query: 123 GEIASILDGIPLSVQRRFPE-LENRHVDFL-KRDIIKAMNKAAALDE 167 S + +P V + + + ++ + +RDI +A+++ A + Sbjct: 118 MAFRSKMLSLPSKVALQLVNKNDPKLIEAILERDIHEALSELAKYNP 164 >UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUY4_9PLAN Length = 180 Score = 68.3 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 25/160 (15%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 + + A FG + RTI+ W+ +G PV+ G Y A+ +W Sbjct: 18 TQARAAAFFGVNPRTIKEWRRRGAPVIETGIANAPYRYALGAISQWLIA----------- 66 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAE---VVETAFCTFVLSR 120 E QA++ + ER +L + Q A +L N + +V T C + + Sbjct: 67 ---EREAQAAKEAPSASGSDLERQKL-QEQVRALQLGNDLRQTKYVRLVNTLVCRKAVEK 122 Query: 121 IAG----EIASILDGIPLSVQRRFPELENRHVDFLKRDII 156 +I + + +P + P ++ D L+ + Sbjct: 123 TFKWSCDKIRNRCESLPSEIVATMP---AKYRDDLQEEAA 159 >UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A9IRX2_BORPD Length = 147 Score = 67.9 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 57/160 (35%), Gaps = 28/160 (17%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66 QLA + G S R I+ EQG + Y I+ + Sbjct: 2 QLAALAGVSARRIRQLAEQGTL-----ERVGRNEYALGPSIRALID-------------- 42 Query: 67 EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 + ++ ER RL RAQAD EL+ A V V + G I Sbjct: 43 -------DAAGTGSVLQRERTRLVRAQADEAELRLAEAKKLVAPIEQYAEVWAHRCGIIR 95 Query: 127 SILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAA 164 + + +P V + E+R L+ +II+A+ +A Sbjct: 96 ANMLNVPGRVVSQLLGENDESRFKATLRAEIIEALKASAD 135 >UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter oxydans RepID=Q5FNI0_GLUOX Length = 200 Score = 67.2 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 10/137 (7%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIE 58 + +NK Q+A S+ T+ NW ++ P G G ++ AV + A R E E Sbjct: 7 VTLNKAQMAKRLKVSLPTLTNWIDRWPDFPADHRGTNGKSWRFNPHAVFDFLAARREEEE 66 Query: 59 NEKLRREVEELLQASETDLQPGTIEYERHR---LTRAQADAQELKNARDS-----AEVVE 110 + R+ + + + D E T+ Q D L++ + ++V Sbjct: 67 KATIGRDEKLMELQLQFDDLFAEEEQPARSGFVSTKEQIDIWRLRDLKRKEAERCGKLVI 126 Query: 111 TAFCTFVLSRIAGEIAS 127 +++ +A Sbjct: 127 ADQMQDMMATAFAMLAR 143 >UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=B6IPX8_RHOCS Length = 196 Score = 66.8 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 21/157 (13%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A + S R +Q +G+ G YD ++ Y ++ Sbjct: 11 IAKLLDLSERRVQQLSREGVIPKAERG-----AYDLVGAVRGYVRYLRDLA--------- 56 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 + ER RL +A+AD EL + ++V A + + + + Sbjct: 57 -----QRAQGGVADLPTERTRLVKAKADLAELDAQQRRGDLVPVAETALAWAAVTARLRA 111 Query: 128 ILDGIPLSVQRRFPE--LENRHVDFLKRDIIKAMNKA 162 L +P + + L+ I++A+ + Sbjct: 112 RLITLPDKLAPLVHDAANPAAVRVLLRSAIVEALAEL 148 >UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3T3_DESRM Length = 183 Score = 66.4 bits (160), Expect = 5e-10, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 27/169 (15%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V +LA I G S I+ G+ G GK YD A+ ++ Y + +++ Sbjct: 9 VGTSELALILGLSDSRIRQLDRSGIITKVGRGK-----YDLASAVQGYCNYLKDAASQEG 63 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 E+ L R + EL+ E+ VL+ + Sbjct: 64 --------------------LSEKDLLDRTRRKKLELEIQIMQGELHRAEDVKRVLNDML 103 Query: 123 GEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALDELI 169 G + IP + + + + +K+ I +A+++ + + + Sbjct: 104 GAFRARCLAIPHKLAPQLLGKKELPSIQEGIKKAIYEALSELSDYNPRV 152 >UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1V0_WOLRE Length = 148 Score = 66.0 bits (159), Expect = 6e-10, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 24/162 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M+V K+L+DI + R IQ+ + +G+ G +D ++ Y E Sbjct: 1 MDVTTKELSDILSLTQRRIQDLENEGVITKIGR-----NKWDLKECVQSYIEY------- 48 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 + R + A A+ ++L A EVV LS Sbjct: 49 -----------KIANATSTYGLTEARAQKEFADAEIKKLILAEKKGEVVPIFKLEKDLSD 97 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKA 162 IA +++ L +P ++ R L + + L +I + + + Sbjct: 98 IASTLSNRLYNLPNKIKMRV-NLSDETQNALNYEIEETLKEL 138 >UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY59_RUMGN Length = 180 Score = 65.2 bits (157), Expect = 9e-10, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 18/175 (10%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 M+VN+K+LA I G + R ++ + + G+ + + Y + Y E E Sbjct: 1 MDVNQKELAAILGITDRRVRQLKNEFGLFSKGLSSEKKQKNYVLEKCVPEYINYKLEAEV 60 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 + E E+ + + LK + E+ E L+ Sbjct: 61 Q---------------QGTGYNKEKEQAEHEQIKKKISILKLRKLKRELHEADDVEEFLT 105 Query: 120 RIAGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALDELIPGL 172 + + L +P V + N +D L+R+I + + + + D L Sbjct: 106 DMLVNFKNRLLSVPQKVAPLIVSEDDVNVILDILEREIFQTLEELSEYDPLKIDK 160 >UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Escherichia coli SE11 RepID=B6I861_ECOSE Length = 188 Score = 62.5 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 68/176 (38%), Gaps = 9/176 (5%) Query: 4 NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++ ++A S R +++ + G PV +G G ++ A +Y + + Sbjct: 3 SQAEVAAHLLLSDRRLRDLAKLPGAPVPQGRGD-----WELDAWRHFYIHYLRSNRRDTV 57 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + E+ S + ++ E + + +K + + +SR+A Sbjct: 58 GTDEPEVGDNSPEKNREQWLKNEER---QERILMARVKRRILAKRYAPIELISVAVSRVA 114 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIE 178 E+ + ++ P +++ +PE+ L+ ++ A+N+ A + IE Sbjct: 115 VELRTRVESWPPRLKKVWPEMPQEASSVLREELAIALNELADIRVDFSDYDVSDIE 170 >UniRef50_C7H6G3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C7H6G3_9FIRM Length = 192 Score = 62.2 bits (149), Expect = 8e-09, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 62/180 (34%), Gaps = 12/180 (6%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 N +A +FG + R IQ + G+ ++D ++ Y ++ N + Sbjct: 10 NAAIIAKLFGVTDRRIQQLAKDGIIPAAQK---RPYMFDLLPTVQSYIRYLSDKANGREA 66 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + + E + R++AD ++ ++ + V + + Sbjct: 67 KSADTAQVEME-------KLRAEADMKRSKADMAAMQLKELEGKMHRSEDVEAVTNDLVY 119 Query: 124 EIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181 + S++ +P + ++ N ++ + K +N+ A + ++ G Sbjct: 120 TVRSMIMALPGRLAMDVVQVASANEASALIRAECYKILNELANYNYDPAVYQRRVRDREG 179 >UniRef50_B0PEX8 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEX8_9FIRM Length = 190 Score = 60.6 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 13/176 (7%) Query: 8 LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67 +A++FG + R +Q + G+ YD V+K Y +E + R Sbjct: 15 VANLFGVTTRRVQQLVKDGIITATKEK--GVNKYDLHVVVKQYIRHLSEKVQGRESRHNS 72 Query: 68 ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127 EL R+ ++A EL+ ++ + + + + I Sbjct: 73 EL---------DNQKLGAEIRIKESKARLAELQLQELEGKMHRSEDVEDMTTDLVFTIRG 123 Query: 128 ILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181 +L +P + L++ + ++ ++ + + A E+ G Sbjct: 124 MLVALPGRLAVDLAGLDSPLEISERIRLEVNSILQQLANYRYDPAEYKRRAREREG 179 >UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francisella RepID=A0Q4V8_FRATN Length = 174 Score = 59.8 bits (143), Expect = 4e-08, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 19/164 (11%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 V+ L++ R IQ Q + K + Y + Y + K Sbjct: 8 VSSGVLSEYLSIGERRIQQLTSQDIL-----KKTGKNQYPLKENVNRYIAYLQDRAGGKS 62 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 +E+ + + RLT+ QAD Q++K +VV L+ + Sbjct: 63 EQELNIEFKKQ------------KLRLTKFQADEQQVKAELAQKKVVAVNDVISSLADLF 110 Query: 123 GEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAA 164 + L IP + ++ + L +I +A+ + Sbjct: 111 ALMREKLLNIPERAEYEIFGETDKDIFNQKLSTEIKEALFEICD 154 >UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5S8_MAGSM Length = 292 Score = 59.5 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 23/168 (13%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 + +A S R +++ ++ R D V Y + + Sbjct: 138 TQADIAAHLDLSERRVRDLLKELGLPARNP--------DLDQVRTAYLRHLRAVASR--- 186 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ER +L AQ + E++ R E++ +A Sbjct: 187 ----------HKSKGGLDLTTERAKLAAAQREKTEIEVTRLRGELIPADEVKQAAFALAR 236 Query: 124 EIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELI 169 + L +P + ++ + +A+ + A Sbjct: 237 RVRDRLMLVPHRLAVTLAADPNPAAMEQKMEESLREALEELADRAHDD 284 >UniRef50_C9MV79 Transcriptional regulator, MerR family n=2 Tax=Fusobacteriaceae RepID=C9MV79_9FUSO Length = 189 Score = 58.3 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 64/166 (38%), Gaps = 21/166 (12%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65 +LA + G + R ++N +G+ + KG + + ++ Y E E +NE Sbjct: 12 TELAKLLGITDRHLRNLANEGII--KKTEKGKYLFF---ESVRGYIEYI-ETKNEANVDL 65 Query: 66 VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 +E ++ E + + + ++LK ++ + V++ + Sbjct: 66 KDEKIR-------------EEIKKIKKDTELKDLKIKELKNQLHPASIIEKVMTDSLMNL 112 Query: 126 ASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELI 169 L + + + L+N + ++ I++A+ + + + + Sbjct: 113 KGRLLSLSNRLAPQLIALDNLGEIQEVIQDSILEALEELSEYNPEL 158 >UniRef50_C2BG35 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG35_9FIRM Length = 173 Score = 57.5 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 23/164 (14%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 + + +A + S R ++ +++G+ G LY Y + Sbjct: 8 STQAIAKLLNISERRVRQLRDEGIIEETMPG-----LYKLLETNHAYIDYLKGNSK---- 58 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ER +L +A+ +EL ++ ET+ V++ + Sbjct: 59 ------------IEENLNYYEERAKLVKAKRQNEELDLKIRQRDLHETSEIEEVMADMLT 106 Query: 124 EIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAAL 165 L IP + L+++ L+ + + +N+ + Sbjct: 107 NFKVRLMAIPAKLSPVLAGLKDKTKIYKILQEAVEEGLNELSDF 150 >UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax=Rhizobium etli Kim 5 RepID=UPI000190538F Length = 126 Score = 56.8 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 11/126 (8%) Query: 38 EVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQ 97 D V++W +R EI E+ + + + R AQA Sbjct: 1 SWELDLGDVVRWLEDRAGEIAAERFGASEDGKTSE----------DEAKRRRAVAQAVVA 50 Query: 98 ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRF-PELENRHVDFLKRDII 156 EL V+ A + S I L IP + P + + ++ I Sbjct: 51 ELDMLERLRSVIPIADVLDLWSTDYAAIRDKLMSIPDLIAANVDPAIASHVSGIAEKHIR 110 Query: 157 KAMNKA 162 + K Sbjct: 111 NVLAKL 116 >UniRef50_Q0BEI9 Putative uncharacterized protein n=11 Tax=Burkholderia RepID=Q0BEI9_BURCM Length = 221 Score = 56.0 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 23/171 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + ++Q+AD T+ ++ R + Y E + Sbjct: 34 LTQQQIADHLDLERSTVSRLVDRLNIDYRTAS--------LDEIRVAYLRHLRESAAGRA 85 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + ER R + + L A ++V A ++ Sbjct: 86 SE-------------TGIDLVAERAMTERVDREIKLLTLAEKKGQLVNAAQLEQAYGQMV 132 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDF--LKRDIIKAMNKAAALDELIPG 171 G + L +P + + L VD L + + + + D PG Sbjct: 133 GAFQTELLALPDKLVQELRTLYGVEVDVEWLNEHMYGCLQQLSEYDADSPG 183 >UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root RepID=Q73IA8_WOLPM Length = 163 Score = 53.7 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 11/163 (6%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 ++ + + A G S + + ++G+ L G E ++ A I+ ++ E Sbjct: 5 KITQTEWARELGVSKQYVCYLVKKGIVELEDGLIDREQANEAVAAIRDPSQPLRRKNPEG 64 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 +L +E R +A+A+ E++ + Sbjct: 65 EEVGNNKLSMMLLKTRIKNEMERGRLLEAKAKAEI---------GELISVEEVKTEAFNV 115 Query: 122 AGEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKA 162 A + + L IP V + + + L +I A+ + Sbjct: 116 ARVVRNNLLNIPDRVSALLASINDTEKIHETLTEEIRTALEEL 158 >UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J9F0_AGRRK Length = 214 Score = 52.9 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 53/161 (32%), Gaps = 17/161 (10%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 K L+ + S+RT+++ + V LY + + + +++ Sbjct: 55 TKADLSVLMNVSMRTLRDLDSREKLV----RAPKSGLYMTVPTLNACWAHIRLVAAGRVK 110 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 ER + + +E+ +EV+ S A Sbjct: 111 EAESPHA-------------TERLKSATVERQIREIALKNLKSEVLTLEEIDGAWSTFAS 157 Query: 124 EIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 ++ +++ +P V+ R P + + L+ + + AA Sbjct: 158 QLKAVMLAVPGKVRSRIPHITAHDQETLRTIVKDMLVDLAA 198 >UniRef50_B6IMM8 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IMM8_RHOCS Length = 162 Score = 52.5 bits (124), Expect = 7e-06, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 19/163 (11%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 ++++ + R+I+ ++G+ G D A Y E+ + Sbjct: 3 TQQEVGKHLDLTDRSIRELLDKGVLPNARRG-----ALDLDACRLAYIRHLREVAAGRA- 56 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ER RL R QAD L+NA +++ A T ++ Sbjct: 57 -----------LGPGGDDLTAERARLAREQADHYALRNAALRLDLLPRADITRAVTAAFQ 105 Query: 124 EIASILDGIPLSVQRRFPELE--NRHVDFLKRDIIKAMNKAAA 164 + +P + L L + + + A Sbjct: 106 IVRDRFTALPARLSGPLARLTDPAEVRRRLDDAVQAVLVELAE 148 >UniRef50_A8GLM5 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GLM5_SERP5 Length = 181 Score = 52.1 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 17/174 (9%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 ++K + A G S + G ++ G ++ YD A ++ + Sbjct: 1 MSKAEFARRVGLSRPAVTKLCSSGRIPVKANG---QLDYDIALAAYKRTQQVGREVSADN 57 Query: 63 RREVEELLQASETDLQPGT-------------IEYERHRLTRAQADAQELKNARDSAEVV 109 + D + QA ++L+ + +V Sbjct: 58 GKIKASPAAPPPQDFPDSDDSPVAGNSRMIQQFNKAKTIEKTFQAKLRQLEYEEKNKTLV 117 Query: 110 ETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVD-FLKRDIIKAMNKA 162 + A E+ L IP R ++ ++ ++ +A + Sbjct: 118 PRTEVEDDAAVAASELRGRLFSIPARAAVVCEGKTAREIERIIETELNQAFEEL 171 >UniRef50_A5V8D7 Putative uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8D7_SPHWW Length = 229 Score = 51.0 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 11/170 (6%) Query: 4 NKKQLADIFGA-SIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 N +LA + G S TI+ ++ P+L G +G D A + E E Sbjct: 16 NLSELAMMPGMPSEPTIKKLIDENPDFPILTRGDRGVAWEIDLVAAATFIRELQRRAEER 75 Query: 61 KLRREVEELLQASET-DLQPGTIEYERHRLTRAQA------DAQELKNARDSAEVVETAF 113 R E + +I +R LT A + +K A E++ Sbjct: 76 ARARAAEVNQLGLDLLGADAASIRTDRVELTSADRRALMEEELVAIKLAEKRGELIRKDE 135 Query: 114 CTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +S++A L + +R +L L++ I A Sbjct: 136 AEQAISKLAVAFVERLSSLVARASKRV-DLPRETQVQLQKLIDGDRTWIA 184 >UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A443EF Length = 167 Score = 50.2 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 26/182 (14%) Query: 1 MEVNKKQLADIFGASIRTIQN-WQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 M ++ + +A +G TI+ W ++GMP + + V +W Sbjct: 1 MALSYRSIAKQYGYDESTIRQSWAKKGMPDPKSSTE--------LEVRQWIVTN------ 46 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 +L I+ ER R A+A+ E+ + E++E LS Sbjct: 47 ---------ILNPLRDTDTQEQIQRERLRKLTAEAEQAEISVRQCMDELIEITVVQNELS 97 Query: 120 RIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177 I L IP E E L+ I + +N+ + +P + Sbjct: 98 SYLKRIRDHLRTIPNKTYLELCEQEKAIDIKRVLQSRIDEVLNECGRFNYELPQEENNKE 157 Query: 178 EQ 179 ++ Sbjct: 158 DE 159 >UniRef50_B8L8I9 Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8I9_9GAMM Length = 167 Score = 48.7 bits (114), Expect = 9e-05, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 58/179 (32%), Gaps = 24/179 (13%) Query: 4 NKKQLADIFGASIRTIQ-NWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + +LAD FG RT +E G+P L + +Y A A + Sbjct: 12 SVARLADEFGMDRRTASKRLKEAGVPPLTK--RAGHDVYRLADAAPALVNPGAAAFGAEG 69 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + +L R Q++ + LK ++V A + + Sbjct: 70 VVDPRDLP--------------PMERRAYYQSENERLKVESTIGQLVPAAEVEADYAELV 115 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181 ++ D +P ++R+ L V ++ + + + G+ + + S Sbjct: 116 KKVVQFFDTLPDVLERKAG-LTPEQVVKVQDECDRVR------QSMYEGITDDDVRDSA 167 >UniRef50_A9C2C3 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2C3_DELAS Length = 161 Score = 48.3 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 45/119 (37%), Gaps = 5/119 (4%) Query: 50 YAERDAEIENEKLRREVEELLQASETDLQPGTIEY----ERHRLTRAQADAQELKNARDS 105 Y+ + A ++ + + E+ ++ + R A A EL+ + Sbjct: 34 YSPKKAAEVARRIEAGEDVGGEELESADGQLSLTTRHLLAKARKEAALAGLNELQLKVKT 93 Query: 106 AEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164 E + A + + ++ L +P +++R+ L + ++ I +A++ A Sbjct: 94 GEYLPRAAYREATATLVASLSQGLRSLPDTLERKCG-LAPEVLQDIESAIDEALSHIAD 151 >UniRef50_B0P604 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P604_9FIRM Length = 188 Score = 47.9 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 19/166 (11%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 EV+ +LA I G + R ++ E G+ G+ + A ++ Y + A+ + Sbjct: 13 EVSTTELACILGITGRYVRQMAEDGVLSKVDKGR-----FLLAESVQKYIKYTAKDAMNE 67 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 ++++ + L ++A +L+ ++ + S + Sbjct: 68 EDIKLDKAKR------------TAEVTLKASKAQVAKLEAEEMKGKMHRAEDVEAMTSDL 115 Query: 122 AGEIASILDGIPLSVQRRFP--ELENRHVDFLKRDIIKAMNKAAAL 165 I L +P + E + +++++ K M + A Sbjct: 116 VYAIRGALIALPGRLAVDVAAVESPAEASEIIRKEVYKVMRELANY 161 >UniRef50_A5Z445 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z445_9FIRM Length = 149 Score = 47.9 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 22/155 (14%) Query: 14 ASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQAS 73 + + ++ ++G+ + G LY A + Y + + E Sbjct: 1 MTPKNVERLTQKGILQTKQG-----NLYALAETNRAYIKYLRDRNPESQEA--------- 46 Query: 74 ETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133 + ER +LT+ + +EL A E+ + V++ + S L IP Sbjct: 47 ------VDLNEERAKLTKTKRLNEELDLAVKKGELHRSEDIEKVMTAMLINFKSRLSAIP 100 Query: 134 LSVQRRFPELENRHVDF--LKRDIIKAMNKAAALD 166 + + ++ F L I +A+N+ + + Sbjct: 101 AEEADKLAAMTDKAKIFLYLNDKIKEALNELSDFE 135 >UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LD26_ECO55 Length = 173 Score = 47.5 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 26/165 (15%) Query: 2 EVNKKQLADIFGASIRTI-QNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 ++A+ G + T+ + W ++GMP + K + +I+ Sbjct: 4 RYTTNEIAERMGVNDSTVSREWAKRGMPHPKKASKKEIDQWILINIIQ------------ 51 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 IE E+ R +AD E++ + +V+ T + T L+ Sbjct: 52 -----------PLRNTDVKEQIEKEKLRKISLEADLVEIELNISTEKVLSTDYVTQTLTG 100 Query: 121 IAGEIASILDGIPLSV-QRRFPELENRHVD-FLKRDIIKAMNKAA 163 + +L IP S+ F + + L+ I + + Sbjct: 101 YFAALRGVLRSIPASIYVELFESEDADTLRIKLEERIDEKLRGLG 145 >UniRef50_D1Y312 Putative uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y312_9BACT Length = 164 Score = 47.1 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 52/169 (30%), Gaps = 18/169 (10%) Query: 14 ASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQAS 73 + R ++ +QG+ G+ Y + Y +E + E + Sbjct: 1 MTDRRVRQLAQQGILPRDEKGR-----YPMRDCVLAYIAYLKSNPDESASVKELEYRK-- 53 Query: 74 ETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133 +A+AD +L E++ A E+ + + G+P Sbjct: 54 ---------LKAETEERQAKADKAQLDLDERRGELISRADMYREWIGRCVELRAAMLGLP 104 Query: 134 LSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180 + RF + R + + + + + + P S ++ + Sbjct: 105 NELGFRFTADDTRALVEEVSEEFVRTTLETWSREGPFTPRAPSAALDAA 153 >UniRef50_A7MG09 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MG09_ENTS8 Length = 181 Score = 46.7 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 6/130 (4%) Query: 39 VLYDSAAVIKWYAERDAEIENEKLRR----EVEELLQASETDLQPGTIEYERHRLTRAQA 94 YD A V + + R +I + L + E+ RL +A+A Sbjct: 10 YGYDPATVSRDWKARGLDISQTDEEIYQWVQDNVLTPLRGQTDLKEETQREQLRLAKAKA 69 Query: 95 DAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLS--VQRRFPELENRHVDFLK 152 D +E+ + ++E + T LS ++ ++L IP + V+ E N+ + LK Sbjct: 70 DIEEMNADQLRRNLIEVDYVTESLSSYLLQLKNMLRSIPNTTYVELFSSEDANQLRETLK 129 Query: 153 RDIIKAMNKA 162 I + + Sbjct: 130 DKIDEVLRDI 139 >UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteurellaceae RepID=B8F4L1_HAEPS Length = 170 Score = 45.2 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 24/163 (14%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 +++N Q+A++ G +T+ P L G LY +I Sbjct: 22 LKLNINQIAEVTGLHRQTVSQRVAGLTPSL--GSNSKLKLYSLRDLI------------- 66 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 L +E R QA+ + LK R++ E++ + +S Sbjct: 67 --------LTGLTEKMSADVDSLSPNDRRAFWQAENERLKYERETRELIPAFEVSQEMSI 118 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +A + L+ +P ++R L+ + + +++ I ++ A Sbjct: 119 LAKAVVQTLETLPDILERDCG-LQPKDLIRVQQVIDDIRDQMA 160 >UniRef50_A4U1Y8 BACTERIOPHAGE-RELATED PROTEIN n=2 Tax=Magnetospirillum RepID=A4U1Y8_9PROT Length = 170 Score = 45.2 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 36/165 (21%), Gaps = 17/165 (10%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 K + A G + I G+PV G A + W K Sbjct: 9 TKTEFAARVGLTKGRISQLVADGLPVQPDGTIA------IAEGLAWMEANLDPARRNKGG 62 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + ++ R Q L ++ +V++ + A Sbjct: 63 P-------PAPVATGTLSLAEARRMYMVVQVQRARLAYDKERGQVIDAKEAAAAVFSRAK 115 Query: 124 EIASILDGIPLS----VQRRFPELENRHVDFLKRDIIKAMNKAAA 164 + L R + + + + Sbjct: 116 AERDSHMAWVSRTAPLLAAETGADPQATFAALDRFMREHLEHLSD 160 >UniRef50_Q2SAJ6 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q2SAJ6_HAHCH Length = 170 Score = 45.2 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 20/175 (11%), Positives = 52/175 (29%), Gaps = 9/175 (5%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M ++ + A G S ++ + G G ++ D + + + Sbjct: 1 MGISIRAYARHRGVSDTAVRKAIQTGRITPEQDGTLDQERAD-----REWERNTESPKVG 55 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 R V+ ++ R +A +++ AR E+V+ + + + Sbjct: 56 SRRGVVKARTPEDIAGNGNASLLQARTVNEVVKAQTNKVRLARLKGELVDRSQAIAHVFQ 115 Query: 121 IAGEIASILDGIPLS----VQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171 +A P + + L+ + + + + L + G Sbjct: 116 LARTERDAWLNWPSRVSPHMAAHLGVDPHAFHVALESAVREHLQELGELRPRVDG 170 >UniRef50_C7G5Z1 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5Z1_9FIRM Length = 196 Score = 44.8 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 56/179 (31%), Gaps = 13/179 (7%) Query: 5 KKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRR 64 ++A++F + R IQ + G+ G Y+ K Y + + K Sbjct: 18 TTKMAELFELTARRIQQLTQDGVLKTHDTPAGR--RYNVGEATKDYIKYLRTQLDRKASA 75 Query: 65 EVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGE 124 + ++L + A+A EL+ A + + + + Sbjct: 76 QNDKL---------ETDKLQAEVDIKSAKARVAELQLAELEGTMHRAEDVEAITTDLVFN 126 Query: 125 IASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181 I S+L +P + EL ++ ++ + + + ++ G Sbjct: 127 IRSMLMAMPGRLAVDTAELASPAETSARIQEEVNEILLSLSQYHYDPEEYKKRVKDRQG 185 >UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9W3_GEMAT Length = 169 Score = 44.8 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 19/134 (14%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMP-VLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 ++ Q+A I G + TI+ ++G P V G +G + D+ + W+ ER+ EK Sbjct: 7 FSQTQMAAILGVTSPTIRAAIDEGAPGVHAQGSRGTKGKIDATQFVPWWIERERSRAREK 66 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + + + ++ IE +R +L + + +A A L + Sbjct: 67 DKGQSQAAIER------ELDIEMKREKLLKEKREAL------------PRAVMVNTLRDV 108 Query: 122 AGEIASILDGIPLS 135 A + + +P Sbjct: 109 ATRLNVTITQMPDR 122 >UniRef50_C0PVV4 Gifsy-2 prophage protein n=12 Tax=Salmonella enterica RepID=C0PVV4_SALPC Length = 198 Score = 44.4 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 60/166 (36%), Gaps = 23/166 (13%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVL-YDSAAVIKWYAERDAEIEN 59 +E+N QL+ I GA +TI + + V GG G+ + Y ++ Sbjct: 29 LELNITQLSAITGAHRQTIASRLKG---VKTSGGNGSNLKIYRLVDILTAM--------- 76 Query: 60 EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119 + + T R Q++ ++ ++ ++ + V + Sbjct: 77 ---------MTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYA 127 Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAAL 165 +A + L+ +P ++R L ++ ++ I + A++ Sbjct: 128 VMAKTVVKTLEILPDLLERDA-ALPPDALEMTQKIIDQLREDLASM 172 >UniRef50_D0H0S3 Putative uncharacterized protein n=1 Tax=Vibrio mimicus MB-451 RepID=D0H0S3_VIBMI Length = 174 Score = 44.4 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 56/158 (35%), Gaps = 18/158 (11%) Query: 6 KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65 ++A+ FG S T+ + G +G++V + + + Sbjct: 16 SKIAECFGMSRNTVSKRLREFNVQPSGKERGSDVY------------ALKDAAPALFKSD 63 Query: 66 VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125 + + P + R Q++ + +K + ++ E+ + +A + Sbjct: 64 SLPAGAVFDPNKMPPGM-----RKDWYQSENERVKLEKALGQLCESGDVARNYALLAKSV 118 Query: 126 ASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +++ +P ++R L V +++ I ++ A Sbjct: 119 IQVMETMPDVLERDCG-LTPSQVSKVQQSIDDLRDQIA 155 >UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP Length = 233 Score = 44.4 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Query: 1 MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 M +N QLA+ FG + +++W +G+P +R G+ +++D A V+ W AER + Sbjct: 1 MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAERGLVAKA 57 Query: 60 EKLRREVEELLQASETDLQ 78 L + AS + Sbjct: 58 GFLADQPAAAGPASRLESW 76 >UniRef50_C8TRT6 Predicted terminase small subunit n=10 Tax=root RepID=C8TRT6_ECO26 Length = 175 Score = 44.1 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Query: 72 ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDG 131 + + + + R Q++ + +K ++ +++ V S + + +L+ Sbjct: 65 EAADSVHDPSRMEPKERKDWYQSENERIKLEKEQRKLIPVDEVVIVYSSMRKAVVQVLET 124 Query: 132 IPLSVQRRFPELENRHVDFLKRDIIKAM 159 IP ++R L + V +++ I Sbjct: 125 IPDVLERDC-ALTPQAVGVVQQAIDDLR 151 >UniRef50_B0U9E3 Putative uncharacterized protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0U9E3_METS4 Length = 115 Score = 44.1 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 75 TDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPL 134 + ER RLT A+AD L+ A+ E+V G + S L +P Sbjct: 2 DEPAADDYVTERARLTAARADLAGLELAQLRGELVPADDIEATWGAAVGAMRSRLLALPA 61 Query: 135 SVQRRFPEL--ENRHVDFLKRDIIKAMNKA 162 R + ++ ++I + + Sbjct: 62 KTAPRVVTMRTAAEVATLIRGELIDILIEL 91 >UniRef50_A8A1J3 Putative membrane protein n=2 Tax=Escherichia coli RepID=A8A1J3_ECOHS Length = 187 Score = 44.1 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 14/176 (7%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSA-----AVIKWYAERDAEI 57 +N+ Q A G +TI W + G ++ G + D+A A + Sbjct: 4 MNQSQYAQHSGVDRKTIGRWIKAGRFIVMDGDLIDVEASDAALKKNRDGKDPRASNAKKK 63 Query: 58 ENEKLRREVEELLQASETD---LQPGTIEYERHRLTRAQ--ADAQELKNARDSAEVVETA 112 + R + ++ + + + + E R A +L+ +DS + +E A Sbjct: 64 KAPAPRNDGDDEIDETVRQIMLTEGAVLSREEAARIRENYMALQAKLQYEKDSGQTIELA 123 Query: 113 FCTFVLSRIAGEIASILDGIPLSVQRRFPEL----ENRHVDFLKRDIIKAMNKAAA 164 VL + P V +R + L + K ++ Sbjct: 124 IAEEVLFNAFRQQRDAWLNWPSRVAPLIAADLNVPADRMTEVLIEHVHKHISVLGE 179 >UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=B7LNB9_ESCF3 Length = 172 Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 21/163 (12%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 + +N QLA + +T+ + P G LY +++ R Sbjct: 12 LRLNINQLAALTNLHRQTVASRLSNVEP--APGSNSRLKLYSVLDILRELLGRTT----- 64 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120 +L R Q++ + LK +++ E++ + + + Sbjct: 65 -------------TPELVAVDKMTPPDRKAWFQSERERLKFQQETGELIPASEVSREFAS 111 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 +A + +L+ +P ++R + V +++ I ++ A Sbjct: 112 MAKAVVQVLETLPDILERDC-AMTPSAVVRVQKVIDDLRDQIA 153 >UniRef50_B2JD13 Putative uncharacterized protein n=2 Tax=Burkholderia RepID=B2JD13_BURP8 Length = 197 Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 25/191 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLR------GGGKGNEVLYDSAAVIK-------- 48 +N+ + A + G S +T+ W+E+G V N Y Sbjct: 1 MNQSEFAALHGVSRKTVTKWKERGWLVFAGDAIDVKASNANLTRYRRDGAPAVTQSAKQT 60 Query: 49 ---WYAERDAEIENEKLRREVEELLQASETDLQP----GTIEYERHRLTRAQADAQELKN 101 + + E + + L + + R +L+ Sbjct: 61 AKGNKRQSVTLAAKGVTLEDGESASEVAGRILSGNVELLSFDEARCLKENYLGLMAQLEY 120 Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIK 157 R S +VE T +L P V +R V+ L + K Sbjct: 121 ERKSGSLVELDTATAILFEEFRAQRDAWLNWPTRVGPILAADLGVEADRVVETLTAHVHK 180 Query: 158 AMNKAAALDEL 168 + + + Sbjct: 181 HIAQLGEPEAN 191 >UniRef50_Q89JP3 Bll5240 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89JP3_BRAJA Length = 202 Score = 43.3 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 19/162 (11%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63 Q A S ++ +G+ + GK YD V + Sbjct: 25 TIAQAAAHICCSRSQFDSYLAEGVITRQPSGK-----YDLDQVRREVLAHLRS------- 72 Query: 64 REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123 + A + ER RL A+ +E ++A ++ ++V+ L + Sbjct: 73 ------VAAGRGGAAGSRLTEERTRLVAAKRRREERQDAFEAGQLVQLESVCRCLEQSLV 126 Query: 124 EIASILDGIPLSVQRRFPELENRH-VDFLKRDIIKAMNKAAA 164 + + L +P + + A+ + A Sbjct: 127 GMRNRLLNLPGETAYLLAMRRQEECFKVVDDAVRAALEEIAD 168 >UniRef50_B3H0X8 Putative uncharacterized protein n=4 Tax=Pasteurellaceae RepID=B3H0X8_ACTP7 Length = 159 Score = 42.9 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 1/91 (1%) Query: 73 SETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGI 132 SE R QA+ + LK + E++ + + +A + L+ + Sbjct: 56 SEKMSADVDSLSPNDRRAFWQAENERLKYEEKTGELIPASEVALEMGAMAKAVVQTLETL 115 Query: 133 PLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163 P ++R L+ + + +++ I ++ A Sbjct: 116 PDILERDCG-LQPKDLIRVQQVIDDVRDQMA 145 >UniRef50_Q48KF6 Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48KF6_PSE14 Length = 219 Score = 42.9 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 55/175 (31%), Gaps = 14/175 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWY-------AERDA 55 +++ A G S + + + G + G L D A ++ + Sbjct: 9 LSRTAYAKSKGWSRQYVGKLAQNGRLIETADG-----LVDVDATEQFLGITSDPSRRPAS 63 Query: 56 EIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115 V E + E+ + + RL AQA E + +VE A Sbjct: 64 TSAQPSPISHVIEPVNPPESPSMVVGYQQSKARLALAQARLAETTLLEANKSLVEVAVVD 123 Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPEL-ENRHVDF-LKRDIIKAMNKAAALDEL 168 + ++ +P + + + ++ L + + ++ AA++ Sbjct: 124 AAAFAAGRMLRDLILSLPTQIAPELSGMSDPWEIEKYLVASLRRVLDDAASMTSK 178 >UniRef50_Q31QA7 Putative uncharacterized protein n=2 Tax=Synechococcus elongatus RepID=Q31QA7_SYNE7 Length = 179 Score = 42.9 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 24/178 (13%), Positives = 57/178 (32%), Gaps = 13/178 (7%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 V+ + A + S + + + G G D A + +++ N Sbjct: 4 RVSARAYARMRNVSHKGVLEAIQSGRLPSAV-KVGQRWEIDPAQADREWSQN----TNVN 58 Query: 62 LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121 + + A D + + A +L + ++V Sbjct: 59 HHKSKAPRVVAEPEDSSLPGLNESKAEREYYLAKLAQLDYEERAGQLVSAEDVRVTWFSH 118 Query: 122 AGEIASILDGIPLS----VQRRFPELENRHVDFL----KRDIIKAMNKAAALDELIPG 171 A + + +P+ V+ EL+ + +R++++A+ + A +EL P Sbjct: 119 ARRVRDAILNVPIRIVDEVRAIAGELDENQRHEILLCLQRELVQALEELAGPEELPPQ 176 >UniRef50_A0NRU5 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRU5_9RHOB Length = 163 Score = 42.5 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 5/112 (4%) Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 V +LQ + + + + R A+A EL A+ E++ + Sbjct: 49 AMSVRSILQHARKSREDSELSKAKAREINARARRHELSMAKAERELIPLEDFEVAFDEVL 108 Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLS 174 + S G+P + R + ++ +M + AA + +L Sbjct: 109 AAMRSEFVGLPARLTR-----DRTERTRFNGEVHASMARIAAKLKDRADMLR 155 >UniRef50_B2UKQ5 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKQ5_AKKM8 Length = 167 Score = 42.5 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 17/158 (10%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +++ +LA G + TI ++G+ + A I+ E + Sbjct: 4 ISQAELARQLGVNKSTITYHVKRGL---------------THAQIRELIEARRKENPIAE 48 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTR--AQADAQELKNARDSAEVVETAFCTFVLSR 120 E A E + +T QA+ +K +D A +V+ ++ Sbjct: 49 PASPEIGKNAPEEGVAELRKRKLAAEITYKNLQAEQARVKLEKDKARLVDMEDVNELVVH 108 Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKA 158 +A +L + + L + + R+ IKA Sbjct: 109 LASITKGVLQAFENKLPGKMEGLTAAEMVPMLREEIKA 146 >UniRef50_C1CPH0 Transcriptional regulator, AlpA family n=4 Tax=Streptococcus RepID=C1CPH0_STRZT Length = 89 Score = 42.5 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD 54 +NK Q G S T+ W ++G+PV++ G V ++ + KW + Sbjct: 38 YLNKGQTCKYLGISNNTLDGWIQKGLPVIK---IGKTVRFNKNEIDKWLCRKA 87 >UniRef50_Q830E1 Conserved domain protein n=7 Tax=Enterococcus faecalis RepID=Q830E1_ENTFA Length = 89 Score = 42.1 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDA 55 +N+ ++A F S TI+ W++ G+P +G YD +W + Sbjct: 39 LNQTEIAKYFNVSTTTIREWEKLGLPHGSVSKQGK--FYDKEGCRRWLLSQKR 89 >UniRef50_Q2W853 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=Q2W853_MAGSA Length = 211 Score = 42.1 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 62/179 (34%), Gaps = 11/179 (6%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M ++ ++ A G S ++ + G G + V D+A + R A + Sbjct: 31 MGLSVREYARRRGVSHTAVRKAVQTGRIPQEPDGTIDPVKADAAWDAQTDPGRKATTAPK 90 Query: 61 KLRREVEELLQASETDLQPG-------TIEYERHRLTRAQADAQELKNARDSAEVVETAF 113 + + + P T R A+A ++ R EVV+ A Sbjct: 91 PVIEAPIAPAPKPQRETTPAVPAAAGATFAQARTAHEVAKAQKARIQVDRLKDEVVDRAR 150 Query: 114 CTFVLSRIAGEIASILDGIPLSVQRRFPE---LENRHVDF-LKRDIIKAMNKAAALDEL 168 T ++ ++A + P V + ++ + L+ + +++ AA++ Sbjct: 151 ATALVFKLARQERDAWITWPARVAGQMAAEIGIDPHVMQTLLEAHVHAHLDELAAIEPN 209 >UniRef50_D1AA53 N-6 DNA methylase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AA53_THECD Length = 698 Score = 42.1 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 3/99 (3%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQGM-PVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 +V +++ I G + T+ NW+ + GG LYD AV W R Sbjct: 7 QVTAAEISRIAGVTRATVSNWRRRHADFPAPVGGTEASPLYDLDAVRAWLKARGHASAAN 66 Query: 61 KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQEL 99 + L + + RL A D EL Sbjct: 67 PIEELRTTLRAHGGDTARLLPLVLAAARL--ADGDLTEL 103 >UniRef50_Q53574 Putative uncharacterized protein orf G n=1 Tax=Synechococcus elongatus PCC 7942 RepID=Q53574_SYNE7 Length = 171 Score = 41.7 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 44/165 (26%), Gaps = 14/165 (8%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66 + A G + + I G + G+ D A + +A Sbjct: 9 EFARANGVAPQAIHQAIAAGR-ITSVWKVGSRWHVDPVAAAREWAANTDPSRIRNDGGGR 67 Query: 67 EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 + + R +A+ L +V+ + + + Sbjct: 68 GKRREP-----PSAEQLEARRLKAHYRAELLRLDVEERERSLVDAEDIASTWAAESKRVI 122 Query: 127 SILDGIPLSVQRRF----PELENRHVDFL----KRDIIKAMNKAA 163 +P + R EL + + +RD+ +A+ + Sbjct: 123 DRFATVPAACVRSIEAVTGELPPEKREAIAALLQRDVSQALEPLS 167 >UniRef50_Q72FM0 Putative uncharacterized protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72FM0_DESVH Length = 243 Score = 41.4 bits (95), Expect = 0.015, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 7/122 (5%) Query: 50 YAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVV 109 Y +RD + L + +E QA A+ KN + + + Sbjct: 100 YRKRDVDRYAASLPTHALPEKETAEAQEYASRKAKAEAEKLEEQAKAERFKNEVRAGKYI 159 Query: 110 ETAFCTFVLSRIAGEIASILDGIPLSVQRRF-------PELENRHVDFLKRDIIKAMNKA 162 L+ AG +A+ L + + P+ + F +R + A+N+ Sbjct: 160 LRDDVEVELAARAGVLATGLRTMFETSLLDLIHTAEGNPKKAPDLLSFFERQLDAALNEY 219 Query: 163 AA 164 A Sbjct: 220 AR 221 >UniRef50_C8NRQ9 Putative uncharacterized protein n=2 Tax=Corynebacterium efficiens RepID=C8NRQ9_COREF Length = 604 Score = 41.4 bits (95), Expect = 0.015, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 2/88 (2%) Query: 2 EVNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59 ++ ++A + G S + W+++ GKG +L++ V+ W + I Sbjct: 7 KITTSEIAQLAGVSTAAVSQWRKRHPDTFPQALPGKGRAILFNRIDVLNWLKDNGRPIRE 66 Query: 60 EKLRREVEELLQASETDLQPGTIEYERH 87 + + R Sbjct: 67 VWSMADSIRGFVEASKYGPTLAFFAARA 94 >UniRef50_Q72A11 Putative uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=Q72A11_DESVH Length = 337 Score = 41.0 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 52/159 (32%), Gaps = 16/159 (10%) Query: 14 ASIRTIQNWQ--EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQ 71 S RT N+ + R G + + A W + + + E Sbjct: 40 ISRRTFYNYVGTRRDCRPRRDGLYHADDIVKIATAAGW----PPRVSAGAVPQGGEGGAT 95 Query: 72 ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDG 131 A + L T+ +R R R + D +EL+ + E+V ++S + S L Sbjct: 96 AKDVGL---TLLEQRLRRERIRGDLEELELRKKRGELVSRGEMERMMSAGVAVLESELLN 152 Query: 132 IPLSVQRRF-------PELENRHVDFLKRDIIKAMNKAA 163 S P+ E +D L+ +N A Sbjct: 153 WIHSEALEIISLVDGNPKHEALLIDMLRERSRVFLNGFA 191 >UniRef50_A3LLS2 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3LLS2_PSEAE Length = 191 Score = 40.6 bits (93), Expect = 0.022, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 54/179 (30%), Gaps = 22/179 (12%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + + + A G S + + QG VL GGK D A + AE + Sbjct: 4 LTQSEFAARRGWSRAYVSKLKSQGRLVLGEGGK-----IDVEATEQQLAESSDPSKAGVA 58 Query: 63 RREVEELLQ---------------ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAE 107 R + + + + R A E + + E Sbjct: 59 ERHQRDRADKGVHAHVTPTATASLPAPSGGGSLNFQKARAHREHYLALLAEDEFRKGRGE 118 Query: 108 VVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAA 164 +VE +A + +L G+P V + + L I A+ +AA+ Sbjct: 119 LVEREVVDCAAFDVARSLRDLLMGLPTKVAGELVAITDPWEMEQRLTSLIRVALEEAAS 177 >UniRef50_C7Q3S9 Transcriptional regulator, MerR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q3S9_CATAD Length = 249 Score = 40.6 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 9/163 (5%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + QLAD G ++R ++++ ++G+ YD+ AVI E Sbjct: 2 LTISQLADYVGVTVRAVRHYHQRGLLPEPDRDHSGYRRYDAQAVID-LIRIKTLAEAGVP 60 Query: 63 RREVEELLQASETDLQPGTIEYER------HRLTRAQADAQELKNARDSAEVVETAFCTF 116 +EELL A E +R L + +L + E A Sbjct: 61 LARIEELLAADAEQFTDAVAEIDRSMQDQIRELKERRRRVAQLASGERLFLPTEIAEYIE 120 Query: 117 VLSRIAGEIASILDGIPL--SVQRRFPELENRHVDFLKRDIIK 157 L + +L + +PEL R + + D+ Sbjct: 121 ELRAVGVSDRGVLMERDGWVILAAAYPELAPRWIAHKRADLAD 163 >UniRef50_B4CXQ2 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXQ2_9BACT Length = 197 Score = 40.6 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 53/156 (33%), Gaps = 25/156 (16%) Query: 7 QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66 +LA+ + +TI W++ + L+D A ++ +R + E + Sbjct: 58 ELAETLKVTRQTINGWKK----FEDAPKPESNGLHDVAKWKEFMRQRGLKGGEETPDIQQ 113 Query: 67 EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126 R R A+ + +EL+ A E + + + G+ Sbjct: 114 AL-----------------RARKLLAEVEERELRLAVKRGEFISVEQVRGDWTNLVGQAT 156 Query: 127 SILDGIPLSVQRRFPE-LENRHVDFLKRDIIKAMNK 161 ++L + P L ++ + KA+++ Sbjct: 157 ALLRR---KFENELPPILSGLDATGIQEECRKAIDE 189 >UniRef50_Q87B59 Phage-related protein n=7 Tax=Xylella fastidiosa RepID=Q87B59_XYLFT Length = 196 Score = 40.6 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 17/169 (10%), Positives = 51/169 (30%), Gaps = 4/169 (2%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 + + A G S I+ + +G +L G+ + D+ + + Sbjct: 1 MTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTL--LDGMTHPVQGGKRGMT 58 Query: 63 RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122 + + Q ++ R A+A EL + + ++ + + Sbjct: 59 DPHAAAVPTFTVMTPQGIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLV 118 Query: 123 GEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELI 169 + + L G+ +++ + + + D+ + + Sbjct: 119 RQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQDAATTL 167 >UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B657_METEA Length = 105 Score = 40.6 bits (93), Expect = 0.026, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 4 NKKQLADIFGASIRTIQNWQEQGMPVL-RGGGKGNEVLYDSAAVIKWYAER 53 + ++AD+ G S T+ W GMP G L D ++W R Sbjct: 36 SASKVADLLGVSRATVAKWIRDGMPTEGSEPAPGKPYLIDIGIAVRWLQGR 86 >UniRef50_C6BW00 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW00_DESAD Length = 185 Score = 40.6 bits (93), Expect = 0.027, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 57/163 (34%), Gaps = 18/163 (11%) Query: 14 ASIRTIQNWQEQG--MPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQ 71 S RT N+ +G +P L G D V + E + + E L Sbjct: 23 ISRRTFFNYVGKGKQVPPL----NGKYYEDDICEVAEQLGWVPIGQVAEADQPDDEGL-- 76 Query: 72 ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDG 131 T + + + +A+ + LK ++ ++++ +++ + + L Sbjct: 77 ---TGDSAKRFQEAKAKDKEFEAELKRLKLNKELGKLIDRENVEMIMAGKTAVLDTGLRQ 133 Query: 132 IPLSVQRRF-------PELENRHVDFLKRDIIKAMNKAAALDE 167 + + R F E E+ + + ++ ++ A DE Sbjct: 134 LFIMKARDFIFAVDGKVEREDAFIQMVNDELDALFSEFARTDE 176 >UniRef50_Q1IL58 Putative prophage repressor n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IL58_ACIBL Length = 247 Score = 40.2 bits (92), Expect = 0.028, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 23/196 (11%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 +++N+ Q AD G + ++ W+++G +Y + Sbjct: 15 LKMNQSQFADALGVTQASVSRWEQKGASTRGPSRGAWTSMYFLG--FDTPLANELYERAG 72 Query: 61 KLRREVEELLQASETDLQPGTIEYERH-------------RLTRAQADAQELKNARDSAE 107 V+ L + DL Y R +A A L N +D + Sbjct: 73 LDPEAVKRLARDFRDDLSGRETTYVRENGDGPVEGVAIPLLTDKAAAGQPRLINEKDIQK 132 Query: 108 VV--ETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAAL 165 + S + S+ + VD +RD K + A+ Sbjct: 133 YLLFPREMVPHPTSTRCMRVRG------DSMAPIVDDGYIVAVDTSERDPRKLVESMVAV 186 Query: 166 DELIPGLLSEYIEQSG 181 + G +++ Q+G Sbjct: 187 SDPESGCTIKWLRQAG 202 >UniRef50_C4S5Y0 DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) n=3 Tax=Enterobacteriaceae RepID=C4S5Y0_YERBE Length = 203 Score = 40.2 bits (92), Expect = 0.031, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 53/193 (27%), Gaps = 32/193 (16%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62 +N+ A + S +T+ W+ +G VL G E + + R + Sbjct: 1 MNQSDFAKLHNVSRKTVTAWKARGWLVLAGDDIDVEASNANIERFRKTVTRPEKKVAGNT 60 Query: 63 RR-------------------------EVEELLQASETDLQPGTIEYERHRLTRAQ--AD 95 + + + + + R + A Sbjct: 61 QGNKAGNKTGNRAKGNRSGNRPDKDPVDSPADVVKKMIAESGVEMTIDEAREMKENFLAL 120 Query: 96 AQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL-----ENRHVDF 150 L+ S +V+ + + + L I R L + V+ Sbjct: 121 LTRLEYDIKSGQVLPYKEMIEAVGSEYSRMRTRLIAIAPEHGPRLRVLASTTNDAEFVEA 180 Query: 151 LKRDIIKAMNKAA 163 L+ + +AM + + Sbjct: 181 LQEVVYEAMEELS 193 >UniRef50_Q6VY86 Putative uncharacterized protein n=1 Tax=Streptomyces phage VWB RepID=Q6VY86_9CAUD Length = 77 Score = 39.8 bits (91), Expect = 0.041, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYA 51 + QL +G S T+ W ++G PV +G +D V W + Sbjct: 22 LTTAQLMARYGVSNWTVNKWVQEGCPVEPTAFRGR--RFDPDRVAAWMS 68 >UniRef50_A0L9B4 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A0L9B4_MAGSM Length = 187 Score = 39.4 bits (90), Expect = 0.050, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 22/184 (11%) Query: 1 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60 M V+ +Q A + G S ++ + G G + D+A + EI Sbjct: 1 MGVSIRQYAKLRGVSDAAVRKAIKAGRISKEPDGTVDPAKADAAWERNTNPAQQREISAN 60 Query: 61 KLRREVEELLQASETDLQP--------------------GTIEYERHRLTRAQADAQELK 100 + R A +L Sbjct: 61 GGANPSANQAANPGYAPPANQPQRFASQTPPSPPLKQGAPDYQTSRAIREAYSARLVKLD 120 Query: 101 NARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKA 158 S ++V + +A + L IP + + V + L +++ KA Sbjct: 121 FEERSEQLVSSDEVKVSAFNLARRVRDRLFTIPHRLSSVLASENDAGVIEERLDQELRKA 180 Query: 159 MNKA 162 + + Sbjct: 181 LEEL 184 >UniRef50_Q398F6 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383 RepID=Q398F6_BURS3 Length = 196 Score = 39.4 bits (90), Expect = 0.056, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 27/195 (13%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPV-------------------------LRGGGKGN 37 +N+ + A + S +T+ W+E+G V + +GN Sbjct: 1 MNQSEFAVLHRVSRKTVTKWKERGWLVFAGDEVDVDSSNALLKRYRRDGIQSVTQPEEGN 60 Query: 38 EVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQ 97 + K R++E+ + ++ + A Sbjct: 61 TKGNKANLTPKRVTSRNSEVTIRDGETAATAAERVLVATGAEMNVDEAKRVKENYLALQA 120 Query: 98 ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDI 155 +L+ RD+ VV + + ++ S L IP R L D L+ I Sbjct: 121 QLEYDRDAGLVVAVSDVAKAVGDEYAKVRSRLLAIPAEHAPRIQRLKSAVEVQDALQEII 180 Query: 156 IKAMNKAAALDELIP 170 +A+ + P Sbjct: 181 TEALEELTRDGVDRP 195 >UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1 subunit of terminase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383339 Length = 110 Score = 39.0 bits (89), Expect = 0.074, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 1/83 (1%) Query: 3 VNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61 V+ +LA + G TI +W ++ G+PV+RGG G E D A + W + + Sbjct: 27 VSITELAALTGYHRDTISDWVKRWGLPVVRGGAHGIEYQIDVRAFVDWPEAQAKAEALKN 86 Query: 62 LRREVEELLQASETDLQPGTIEY 84 P Sbjct: 87 APAAASGGFAGWLGITDPAKAAQ 109 >UniRef50_B2UKR7 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR7_AKKM8 Length = 70 Score = 38.7 bits (88), Expect = 0.089, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 5/62 (8%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPV-----LRGGGKGNEVLYDSAAVIKWYAERDAEI 57 + +LA T+ W GMP + +G YD V W ER + Sbjct: 7 LTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKR 66 Query: 58 EN 59 + Sbjct: 67 TS 68 >UniRef50_C7VU90 Predicted protein n=3 Tax=Enterococcus RepID=C7VU90_ENTFA Length = 104 Score = 38.7 bits (88), Expect = 0.095, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 3 VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD 54 +N+ ++A S+ TI+ ++ GMP + G + YD +W + Sbjct: 54 LNQTEIAKYLNVSVPTIRQYEMLGMPFGQAGTQSKS--YDKEECRRWLLSQK 103 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.121 0.270 Lambda K H 0.267 0.0365 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 660,932,619 Number of Sequences: 3077464 Number of extensions: 18267189 Number of successful extensions: 130513 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 154 Number of HSP's successfully gapped in prelim test: 212 Number of HSP's that attempted gapping in prelim test: 129857 Number of HSP's gapped (non-prelim): 720 length of query: 181 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 60 effective length of database: 668,023,212 effective search space: 40081392720 effective search space used: 40081392720 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 88 (38.7 bits)