BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (181 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS...   363   2e-99
UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS...   197   1e-49
UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431...   180   2e-44
UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1...   107   2e-22
UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID...   101   1e-20
UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH             95   9e-19
UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter...    88   1e-16
UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E...    86   6e-16
UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep...    68   1e-10
UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk...    62   6e-09
UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ...    60   3e-08
UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ...    56   5e-07
UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term...    54   2e-06
UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term...    54   2e-06
UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae...    50   5e-05
UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom...    48   1e-04
UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI...    45   0.001
UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass...    44   0.002
UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba...    41   0.020
UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei...    40   0.026
UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=unc...    40   0.035

>UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD
          Length = 181

 Score =  363 bits (931), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 178/181 (98%), Positives = 179/181 (98%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE
Sbjct: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           KLRREVEEL QASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR
Sbjct: 61  KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS
Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180

Query: 181 G 181
           G
Sbjct: 181 G 181


>UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21
          Length = 182

 Score =  197 bits (502), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 133/181 (73%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M+VNKK+LA+IF    RTI+ WQ QG+P    G KG E ++D+A  I+WYA+R+ +IENE
Sbjct: 1   MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           KLR+E+++L  A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+   V+ET   TF+L R
Sbjct: 61  KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           +A EI+ IL  +PL++QR++P++   H+D +K +I KA N AA   E + G + ++    
Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180

Query: 181 G 181
           G
Sbjct: 181 G 181


>UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15
          Length = 168

 Score =  180 bits (457), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 123/180 (68%), Gaps = 18/180 (10%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +NK  +A   G S++    W  Q  PV +   +G EV +D  +V+      D  +EN+  
Sbjct: 5   LNKSDMASSLGISVQAFDKWGVQ--PVEK---RGREVFFDVRSVV------DNRLENQSR 53

Query: 63  RREVEELLQASETDLQPG-TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
           +      LQ S  D   G  I+YER RLTRA ADA EL N +   EVVETAFCTFVLSRI
Sbjct: 54  K------LQPSPGDDDDGVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRI 107

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181
           A EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++YI+QSG
Sbjct: 108 AAEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYIDQSG 167


>UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16
           Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX
          Length = 180

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 107/180 (59%), Gaps = 21/180 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGM-PVLRGGGKGNEVLYDSAAVIKWYAERD-AEIENE 60
           +NKK +A     S      W   G+ PV R   KG E  YD A+VI+       +++ N+
Sbjct: 6   MNKKNMAKSCRVSATAFDKW---GVTPVER---KGREAFYDVASVIENRVNNAISQLIND 59

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           K   + +ELL+              R RL  AQA+AQELKN RD  +V++T FC + LS+
Sbjct: 60  KGEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSK 106

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           +A +I+SI+D +PL++QR FP++    +D LKR+++KA N +A + + +P +L++Y++++
Sbjct: 107 LASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLKET 166


>UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8
          Length = 177

 Score =  101 bits (252), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 67/94 (71%)

Query: 84  YERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL 143
           YER RL RAQA  QE+KN +D  EVVE  F TFVL+RIA +IA +LD I + V+R+FP++
Sbjct: 80  YERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDI 139

Query: 144 ENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
             R +D +K ++IK+ N AA L E I GLL EYI
Sbjct: 140 PERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYI 173


>UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH
          Length = 159

 Score = 95.1 bits (235), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 24/174 (13%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRR--- 64
           +A   G S++    W   G+P +    +G EVLYD   V++   +R+    N++      
Sbjct: 1   MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53

Query: 65  EVEE-LLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
           E+EE LL+A             R  LT  QA AQ+LKN     +++++ FC F LS++A 
Sbjct: 54  ELEERLLRA-------------RAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAM 100

Query: 124 EIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
            ++S LD IPLS+QR+FP+L  RH+D LK  I K  N+ A   + +P LL EYI
Sbjct: 101 ALSSTLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYI 154


>UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae
           RepID=B7ULU1_ECO27
          Length = 169

 Score = 87.8 bits (216), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 8/116 (6%)

Query: 70  LQASETDLQPGTIE--YE------RHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
           L+ S+ D+  G  E  YE      R  LT  QA  Q+LKN     ++++T FC F LS++
Sbjct: 49  LRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKL 108

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
           A  ++S LD IPLS+QR+FP+L  RH+D LK  I K  N+ A   + +P LL EYI
Sbjct: 109 AMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYI 164


>UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17
           RepID=A3JIS8_9ALTE
          Length = 165

 Score = 85.9 bits (211), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 24/177 (13%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +N++Q+A     ++     W+ +  PV R    G +V YD+ +V+               
Sbjct: 10  LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVL--------------- 49

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
               E  L  +      G IE ER RLT AQA+ QELKN     ++      T  LS +A
Sbjct: 50  ----ENRLSKAGPAGSNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179
           G  A ILD +PL+++R++PEL  + ++ +KR  +KA N+ + LD ++   L +Y+ +
Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDYLNE 162


>UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE
          Length = 169

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 17/178 (9%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIK---WYAERDAEIEN 59
           +NK ++A   G S +    W  Q  P+ R    G E  Y  A V++    +A R  + E 
Sbjct: 1   MNKSEMASSLGISPQAFDKWGVQ--PIER---IGREAFYTVADVVENRIQHAARKQQPEG 55

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
           E L   V+  ++A         +   R  LTRAQ  AQE KN  +   +V   F T+ L+
Sbjct: 56  E-LPEGVDPYVEAK--------LMQARLELTRAQTYAQEQKNQVNDKLLVPVPFATYALA 106

Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
           +IA +I S L+ +  +V +R PE++   ++  +R+I  A N +A   + +PG L EY+
Sbjct: 107 KIAAKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDEYL 164


>UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9
          RepID=C1D857_LARHH
          Length = 171

 Score = 62.4 bits (150), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDA 55
          VNK++L+ I G S RT+  WQ +GMPV+   G+G+   YD+AAVIKWY  R A
Sbjct: 5  VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA 57


>UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15
           Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3
          Length = 139

 Score = 60.5 bits (145), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 8/80 (10%)

Query: 70  LQASETDLQPGTIE--YE------RHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
           L+ S+ D+  G  E  YE      R  LT  QA  Q+LKN     ++++T FC F LS++
Sbjct: 49  LRRSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKL 108

Query: 122 AGEIASILDGIPLSVQRRFP 141
           A  ++S LD IPLS+QR+FP
Sbjct: 109 AMALSSTLDSIPLSMQRQFP 128


>UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa
           RepID=Q87CG5_XYLFT
          Length = 191

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 18/167 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           +VN+  L++IFG ++ T+  W   G PV++ GG+G E  +D+A V +W  ++ AE     
Sbjct: 24  QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
              ++E               E++R ++  A+A  +EL  A    +V         L+R+
Sbjct: 84  AVADIE---------------EWKRRKIA-AEAQREELHLADAKKQVAPLEQVEKTLARV 127

Query: 122 AGEIASILDGIP-LSVQRRFPEL-ENRHVDFLKRDIIKAMNKAAALD 166
             E+ + L  IP  +V     E  E R+   L ++I + +   A+LD
Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174


>UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1
           Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH
          Length = 174

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 23/130 (17%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
           M+VNKKQLADIFG S RT   +Q +   P++   G+G    YD+ AV  +  +R      
Sbjct: 1   MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDR------ 54

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
                            L     E  R RL R +A+ + L   RD  E+V  +    +L 
Sbjct: 55  ----------------ALSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98

Query: 120 RIAGEIASIL 129
           ++   I + L
Sbjct: 99  QVVTAIKTTL 108


>UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1
          Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI
          Length = 163

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 5/68 (7%)

Query: 1  MEVNKKQLADIFGASIRTIQNWQEQGMPVLR---GGGKGNEVLYDSAAVIKWYAERDAEI 57
          M+VNK+QLADI G + + + NWQ++G+PV       G  NE  YD+ AVI+W  +R+ E 
Sbjct: 1  MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANE--YDTVAVIRWMFQRELER 58

Query: 58 ENEKLRRE 65
           N++  R+
Sbjct: 59 LNKEKPRD 66


>UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST
          Length = 184

 Score = 49.7 bits (117), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           EVN+ +LA+I G S+ T+  W  +G PV++ GG+G    +++A V  W   RD +I    
Sbjct: 12  EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSW---RDDDIR--- 65

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
                    QAS T +   T +    R   A+ +  EL  AR   E+V        L++ 
Sbjct: 66  --------AQASHTGM--ATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115

Query: 122 AGEI-ASILDGIPLSVQRRF 140
            GE+ A I + +P    RR 
Sbjct: 116 FGEVRAGIRNVLPSRAARRL 135


>UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas
           naphthalenivorans CJ2 RepID=A1VPI8_POLNA
          Length = 168

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 22/109 (20%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            ++Q+A +FG + +TI  WQ  G P+   GG G    YDS A I W   R    E  K+R
Sbjct: 5   GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGR----EVSKIR 60

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETA 112
            E                    + RL+R Q D  E    RD   ++  +
Sbjct: 61  SET------------------PKDRLSRLQGDKIERDMMRDDGLLIPAS 91


>UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4
          Length = 302

 Score = 44.7 bits (104), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 18/166 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           E+    LA+I G S R I ++ E+G+ V  G  +     +D    ++ Y E    I   +
Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
               V+             T+  ER RL R QAD   L+NA    E+V  A        I
Sbjct: 183 GGDNVD-------------TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167
           A  + +++  +P   ++  P L    VD +  +I  A+ +    D+
Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDD 275


>UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae
          RepID=B0ZSE9_9CAUD
          Length = 191

 Score = 44.3 bits (103), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 28/52 (53%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD 54
          V+KK  A + G S R I  W ++GMP   GGGKG  +  D+   I W   R+
Sbjct: 5  VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRRE 56


>UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis
           X14 RepID=Q1QKR3_NITHX
          Length = 182

 Score = 40.8 bits (94), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 17/162 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           EV+ K+LA++FG S R+++   ++G   ++   +G  +L +S   ++ Y    A +    
Sbjct: 10  EVSAKELAELFGISDRSVRELHDRG--TVKKSARGRYLLTES---VQLYT---AHLRGVA 61

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
             R  E        DL       ER RL + QADA  LKNA    E+V  +        +
Sbjct: 62  AGRGGE----GGVLDLT-----VERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
             ++ S +  +P  V++  P L     D + R+I  A+   A
Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLA 154


>UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1
          Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP
          Length = 233

 Score = 40.4 bits (93), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 4/54 (7%)

Query: 1  MEVNKKQLADIFGASIRTIQNW-QEQGMPVLRGGGKGNEVLYDSAAVIKWYAER 53
          M +N  QLA+ FG +   +++W +++G+P +R  G+   +++D A V+ W AER
Sbjct: 1  MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAER 51


>UniRef50_Q7X2V9 Putative O-linked GlcNAc transferase n=1 Tax=uncultured
           Acidobacteria bacterium RepID=Q7X2V9_9BACT
          Length = 267

 Score = 40.0 bits (92), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 21/157 (13%)

Query: 6   KQLADIFGASIRTIQNWQEQGMPVLRGG-GKGNEVLYDSAAVIKWYAERDAEIENEKLRR 64
           +++ ++FG S RTI+ W EQG  +++G     N+  YD  A+ ++   RD   +   + R
Sbjct: 31  REIKELFGLSERTIRRWTEQG--IIQGTPALNNDFTYDFQALTQFRRVRDLRAQGHSI-R 87

Query: 65  EVEELLQAS--------ETDLQPGTIEYERHRLTRAQADAQELKN---ARDSAEVVETAF 113
           ++E  LQ          E  +      +E   +   Q D + +++   A D+ + V  A+
Sbjct: 88  QIEAELQGQLNLFRRVEENRIARLRTPFEEALVLDDQNDPRAIESYLEAIDNGDNVAEAY 147

Query: 114 CTF-VLSRIAGEIASILDGIPLSVQRRFPELENRHVD 149
           C   ++++  G +   LD   L+++      E RHV+
Sbjct: 148 CNLGIINKDLGNVGVALDNFTLALKH-----EPRHVE 179


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS...   229   4e-59
UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS...   204   9e-52
UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431...   173   2e-42
UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1...   159   5e-38
UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH            155   1e-36
UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep...   146   2e-34
UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E...   140   3e-32
UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter...   133   4e-30
UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI...   130   3e-29
UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID...   129   4e-29
UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ...   122   4e-27
UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae...   103   3e-21
UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term...    94   2e-18
UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom...    92   7e-18
UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk...    86   5e-16
UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term...    84   2e-15
UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ...    84   2e-15
UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass...    73   5e-12

Sequences not found previously or not previously below threshold:

UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba...    91   2e-17
UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of termi...    76   5e-13
UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of termi...    72   9e-12
UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitroba...    68   1e-10
UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalk...    65   2e-09
UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomi...    63   3e-09
UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio ...    63   4e-09
UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenz...    63   6e-09
UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkhol...    58   1e-07
UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodoba...    56   5e-07
UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodoba...    54   2e-06
UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD     52   9e-06
UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreic...    51   1e-05
UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkhol...    49   8e-05
UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=...    48   1e-04
UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphapr...    48   2e-04
UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkhol...    47   2e-04
UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax...    47   2e-04
UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congreg...    47   3e-04
UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastop...    46   6e-04
UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei...    45   0.002
UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethios...    45   0.002
UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter ...    45   0.002
UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax...    44   0.002
UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escheri...    44   0.003
UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Esc...    43   0.004
UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfo...    43   0.006
UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobac...    42   0.007
UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1...    42   0.009
UniRef50_A6XRQ1 Putative uncharacterized protein n=1 Tax=Vibrio ...    42   0.010
UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmati...    41   0.019
UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminoc...    41   0.024
UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylo...    40   0.037
UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteur...    40   0.038
UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterob...    40   0.039
UniRef50_D1YLG3 Conserved domain protein n=2 Tax=Lactobacillus g...    40   0.042
UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Strepto...    40   0.042
UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francis...    39   0.071

>UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD
          Length = 181

 Score =  229 bits (583), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 178/181 (98%), Positives = 179/181 (98%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE
Sbjct: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           KLRREVEEL QASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR
Sbjct: 61  KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS
Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180

Query: 181 G 181
           G
Sbjct: 181 G 181


>UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21
          Length = 182

 Score =  204 bits (519), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 93/181 (51%), Positives = 133/181 (73%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M+VNKK+LA+IF    RTI+ WQ QG+P    G KG E ++D+A  I+WYA+R+ +IENE
Sbjct: 1   MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           KLR+E+++L  A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+   V+ET   TF+L R
Sbjct: 61  KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           +A EI+ IL  +PL++QR++P++   H+D +K +I KA N AA   E + G + ++    
Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180

Query: 181 G 181
           G
Sbjct: 181 G 181


>UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15
          Length = 168

 Score =  173 bits (439), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/180 (55%), Positives = 119/180 (66%), Gaps = 18/180 (10%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +NK  +A   G S++    W  Q  PV +   +G EV +D  +V+    E  +       
Sbjct: 5   LNKSDMASSLGISVQAFDKWGVQ--PVEK---RGREVFFDVRSVVDNRLENQSR------ 53

Query: 63  RREVEELLQASETDLQPG-TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
                  LQ S  D   G  I+YER RLTRA ADA EL N +   EVVETAFCTFVLSRI
Sbjct: 54  ------KLQPSPGDDDDGVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRI 107

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181
           A EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++YI+QSG
Sbjct: 108 AAEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYIDQSG 167


>UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16
           Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX
          Length = 180

 Score =  159 bits (401), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 105/179 (58%), Gaps = 19/179 (10%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD-AEIENEK 61
           +NKK +A     S      W     PV R   KG E  YD A+VI+       +++ N+K
Sbjct: 6   MNKKNMAKSCRVSATAFDKWGV--TPVER---KGREAFYDVASVIENRVNNAISQLINDK 60

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
              + +ELL+              R RL  AQA+AQELKN RD  +V++T FC + LS++
Sbjct: 61  GEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSKL 107

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           A +I+SI+D +PL++QR FP++    +D LKR+++KA N +A + + +P +L++Y++++
Sbjct: 108 ASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLKET 166


>UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH
          Length = 159

 Score =  155 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 16/173 (9%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A   G S++    W   G+P +    +G EVLYD   V++   +R+    N++   +  
Sbjct: 1   MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
           EL +          +   R  LT  QA AQ+LKN     +++++ FC F LS++A  ++S
Sbjct: 54  ELEER---------LLRARAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAMALSS 104

Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
            LD IPLS+QR+FP+L  RH+D LK  I K  N+ A   + +P LL EYI  +
Sbjct: 105 TLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 157


>UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE
          Length = 169

 Score =  146 bits (369), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 15/177 (8%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN--E 60
           +NK ++A   G S +    W  Q  P+ R    G E  Y  A V++   +  A  +    
Sbjct: 1   MNKSEMASSLGISPQAFDKWGVQ--PIER---IGREAFYTVADVVENRIQHAARKQQPEG 55

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           +L   V+  ++A         +   R  LTRAQ  AQE KN  +   +V   F T+ L++
Sbjct: 56  ELPEGVDPYVEAK--------LMQARLELTRAQTYAQEQKNQVNDKLLVPVPFATYALAK 107

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
           IA +I S L+ +  +V +R PE++   ++  +R+I  A N +A   + +PG L EY+
Sbjct: 108 IAAKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDEYL 164


>UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17
           RepID=A3JIS8_9ALTE
          Length = 165

 Score =  140 bits (351), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 24/177 (13%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +N++Q+A     ++     W+ +  PV R    G +V YD+ +V+               
Sbjct: 10  LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVL--------------- 49

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
               E  L  +      G IE ER RLT AQA+ QELKN     ++      T  LS +A
Sbjct: 50  ----ENRLSKAGPAGSNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179
           G  A ILD +PL+++R++PEL  + ++ +KR  +KA N+ + LD ++   L +Y+ +
Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDYLNE 162


>UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae
           RepID=B7ULU1_ECO27
          Length = 169

 Score =  133 bits (333), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 14/178 (7%)

Query: 4   NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
            + ++A     + R ++  Q+  G P+    G       D  A   +Y       +N+  
Sbjct: 3   TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             + E        D     +   R  LT  QA  Q+LKN     ++++T FC F LS++A
Sbjct: 58  DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
             ++S LD IPLS+QR+FP+L  RH+D LK  I K  N+ A   + +P LL EYI  +
Sbjct: 110 MALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 167


>UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4
          Length = 302

 Score =  130 bits (325), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 18/167 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           E+    LA+I G S R I ++ E+G+ V  G  +     +D    ++ Y E    I   +
Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
               V+             T+  ER RL R QAD   L+NA    E+V  A        I
Sbjct: 183 GGDNVD-------------TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168
           A  + +++  +P   ++  P L    VD +  +I  A+ +    D+ 
Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDDD 276


>UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8
          Length = 177

 Score =  129 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 15/175 (8%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++K  L      S +    W    +PV      G   LY  A V+      + +      
Sbjct: 14  LSKTDLCKSLEISTQAFDKW---DVPV--HSKLGRVCLYKMADVVGNRLANERK------ 62

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
               + + +  E D     ++YER RL RAQA  QE+KN +D  EVVE  F TFVL+RIA
Sbjct: 63  ----KTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIA 118

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
            +IA +LD I + V+R+FP++  R +D +K ++IK+ N AA L E I GLL EYI
Sbjct: 119 AQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYI 173


>UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa
           RepID=Q87CG5_XYLFT
          Length = 191

 Score =  122 bits (306), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 18/167 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           +VN+  L++IFG ++ T+  W   G PV++ GG+G E  +D+A V +W  ++ AE     
Sbjct: 24  QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
              ++EE                 + R   A+A  +EL  A    +V         L+R+
Sbjct: 84  AVADIEEW----------------KRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARV 127

Query: 122 AGEIASILDGIP-LSVQRRFPEL-ENRHVDFLKRDIIKAMNKAAALD 166
             E+ + L  IP  +V     E  E R+   L ++I + +   A+LD
Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174


>UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST
          Length = 184

 Score =  103 bits (256), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 19/168 (11%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           EVN+ +LA+I G S+ T+  W  +G PV++ GG+G    +++A V  W            
Sbjct: 12  EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSW------------ 59

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
             R+ +   QAS T +   T +    R   A+ +  EL  AR   E+V        L++ 
Sbjct: 60  --RDDDIRAQASHTGM--ATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115

Query: 122 AGEIA-SILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166
            GE+   I + +P    RR      E +    L  ++ + +   A  D
Sbjct: 116 FGEVRAGIRNVLPSRAARRLIGESDETQIKAVLLDEVDQVLEALADTD 163


>UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1
           Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH
          Length = 174

 Score = 93.8 bits (231), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 31/173 (17%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
           M+VNKKQLADIFG S RT   +Q +   P++   G+G    YD+ AV  +  +R      
Sbjct: 1   MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDR------ 54

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
                            L     E  R RL R +A+ + L   RD  E+V  +    +L 
Sbjct: 55  ----------------ALSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98

Query: 120 RIAGEIASILDGIPLSVQRRFPELENRH-----VDFLKRDIIKAMNKAAALDE 167
           ++   I + L      ++    EL+ R+      D L     +A+   AAL +
Sbjct: 99  QVVTAIKTTLLDSNHILKT---ELDARYDIDVEPDILDEHSRQALTHLAALGD 148


>UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas
           naphthalenivorans CJ2 RepID=A1VPI8_POLNA
          Length = 168

 Score = 92.3 bits (227), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 63/174 (36%), Gaps = 27/174 (15%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            ++Q+A +FG + +TI  WQ  G P+   GG G    YDS A I W   R+         
Sbjct: 5   GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGRE--------- 55

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                        +     E  + RL+R Q D  E    RD   ++  +    +      
Sbjct: 56  -------------VSKIRSETPKDRLSRLQGDKIERDMMRDDGLLIPASEIEPMWEGAVI 102

Query: 124 EIASILDGIP-----LSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172
                L G P     LS+    P LE       +  ++K  N  AA+ +   G 
Sbjct: 103 AAREYLLGEPPRIASLSIGMEKPALEELLRTTFEAYLVKLSNWRAAMQDDDEGK 156


>UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis
           X14 RepID=Q1QKR3_NITHX
          Length = 182

 Score = 90.7 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 17/167 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           EV+ K+LA++FG S R+++   ++G   ++   +G    Y     ++ Y      +   +
Sbjct: 10  EVSAKELAELFGISDRSVRELHDRG--TVKKSARGR---YLLTESVQLYTAHLRGVAAGR 64

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
                               +  ER RL + QADA  LKNA    E+V  +        +
Sbjct: 65  GGEG------------GVLDLTVERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168
             ++ S +  +P  V++  P L     D + R+I  A+   A  D  
Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLADNDSD 159


>UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D857_LARHH
          Length = 171

 Score = 86.1 bits (211), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 22/131 (16%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           VNK++L+ I G S RT+  WQ +GMPV+   G+G+   YD+AAVIKWY  R A       
Sbjct: 5   VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA------- 57

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                             + E  + RL R + D  E++ A++   +V        L +  
Sbjct: 58  ---------------NGASKESAKDRLDRLRGDQVEIEIAKELRRLVAIDEIEPALGQFV 102

Query: 123 GEIASILDGIP 133
            +  S++  +P
Sbjct: 103 ADAVSLMAALP 113


>UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1
           Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI
          Length = 163

 Score = 84.2 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 27/184 (14%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGK-GNEVLYDSAAVIKWYAERDAEIEN 59
           M+VNK+QLADI G + + + NWQ++G+PV     K G    YD+ AVI+W  +R+ E  N
Sbjct: 1   MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANEYDTVAVIRWMFQRELERLN 60

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
           +                      E  R RL R +A+  EL+      ++   A       
Sbjct: 61  K----------------------EKPRDRLDRVKAELAELERDEKLGQLAPAAMFERAWG 98

Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYI 177
                  +    +P  +           +  D +   I +A+ K +       G   +  
Sbjct: 99  DHVLAARTEFLTMPEQLAAELTATSGVEIDPDTIAAYINRALEKLSNYGAENDG--DDSR 156

Query: 178 EQSG 181
             +G
Sbjct: 157 NHAG 160


>UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15
           Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3
          Length = 139

 Score = 83.8 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 14/139 (10%)

Query: 4   NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
            + ++A     + R ++  Q+  G P+    G       D  A   +Y       +N+  
Sbjct: 3   TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             + E        D     +   R  LT  QA  Q+LKN     ++++T FC F LS++A
Sbjct: 58  DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109

Query: 123 GEIASILDGIPLSVQRRFP 141
             ++S LD IPLS+QR+FP
Sbjct: 110 MALSSTLDSIPLSMQRQFP 128


>UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of terminase-like protein
           n=1 Tax=Ochrobactrum anthropi ATCC 49188
           RepID=A6WZU0_OCHA4
          Length = 173

 Score = 76.1 bits (185), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 10/161 (6%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++K   + +   S   +      GMPV R G        D A    W +E      N   
Sbjct: 20  ISKSGFSKLINVSPGRVSQMITAGMPVERDG------KIDVARCKLWISEN----INPTR 69

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                +       + Q  ++  ER RL +AQADA ELKNA    E+V  +    + S   
Sbjct: 70  AASQAQGATLFGEEKQAISLTAERARLAKAQADAVELKNATIRRELVSASEVERLWSGEW 129

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
            ++ S +  +P  +++  P L    ++ +  ++ + + +  
Sbjct: 130 MQLRSSVLAVPSRLRQLLPHLTAEDIEAIDGELRRMLTEFG 170


>UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae
           RepID=B0ZSE9_9CAUD
          Length = 191

 Score = 72.6 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 9/135 (6%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V+KK  A + G S R I  W ++GMP   GGGKG  +  D+   I W   R+   +    
Sbjct: 5   VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRREVRRQYGDD 64

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             E E+ +         G+   E   L +A+ +  ++        +V       +L  + 
Sbjct: 65  DDETEDGV---------GSASAEDRLLKKARREKLQIDIDLARRRLVPLDAVGRILQGVG 115

Query: 123 GEIASILDGIPLSVQ 137
              A+ LD +   + 
Sbjct: 116 AVFATQLDSLSSRLA 130


>UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of terminase-like protein
           n=2 Tax=Rhodobacter RepID=A4WNS7_RHOS5
          Length = 163

 Score = 71.9 bits (174), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           + +    L ++   +   + + +++G+ V RG        YD AA +  Y      I   
Sbjct: 15  LRIGASDLCELLSLTPGALSDLKKRGIAVHRGHD-----AYDLAATVTAYVVHLRGIAAG 69

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           +   E               ++  ER RL + QADAQ LKN     E+V  +      S 
Sbjct: 70  RGGEE------------HTASLTAERARLAKEQADAQALKNGALRGELVAASEVERAWSD 117

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166
              ++ S +  +P  + R+   L    VD L R++  A+ +    D
Sbjct: 118 TLRKVRSRILAVPSRL-RQVVTLAPAEVDALDRELRDALMELGNAD 162


>UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A
           RepID=A3WW78_9BRAD
          Length = 151

 Score = 68.4 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V  KQLAD+ G +   ++  Q+ G+    G  K     Y     I+ Y E    + + + 
Sbjct: 5   VTAKQLADLIGITTEHVRRHQQAGVVFKTGRDK-----YLLRESIRGYCEHLRGVASGRG 59

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                        D    T+  ER R  R  AD   LKNA    E+V         + I 
Sbjct: 60  G------------DSAVATLTAERARQAREHADNTALKNAALRKELVPATDVVRGWADIL 107

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLK 152
            ++ + L  +P  V ++ P L     + + 
Sbjct: 108 TKVRAALLAVPSRVWQQAPHLTAEDKNIID 137


>UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZR38_9GAMM
          Length = 181

 Score = 64.6 bits (155), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 17/169 (10%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           + + K ++A     S  T+  W ++G PV   G  G    +D AAV+ W  +R A   +E
Sbjct: 3   LRLTKAEMAKALDVSTNTVGAWVKRGCPVQEQGRPGKPYTFDLAAVVSWLTDRPAAAGSE 62

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
               +                   ER  L R +  A EL+  R    VV+ A    ++  
Sbjct: 63  AEAEDAASYRA-------------ERAALMRVRRQAAELEYQRQRRAVVDRAKAKRLIHE 109

Query: 121 IAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIKAMNKAAAL 165
           I   +A      P  V             R    L R + + +   A  
Sbjct: 110 IGQALAKPWAQWPARVYAEIAAELQADGARVHQVLDRHVHRHLEDLARA 158


>UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii
           ATCC 17100 RepID=D2LK71_RHOVA
          Length = 174

 Score = 63.4 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 19/164 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V+  +L++  G S + I+     G+      G+     Y   A ++ +A+          
Sbjct: 30  VSTFELSEWLGVSNQRIREMARAGLIPTITPGR-----YKLKAAVRAWAD---------- 74

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                +         Q   +   + R   A AD  EL N     E++  +      + + 
Sbjct: 75  ----WQRTSRPGMGSQSLALTAAKTRAAEATADKLELHNQAARRELIAASDVERAWATVL 130

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166
            ++ + +  +P  VQ+R   L    +  +  +I  A+++AA  +
Sbjct: 131 RDVRAGMLSVPSRVQQRMGHLTKHDILAIDAEIRTALSEAAHAE 174


>UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group
           RepID=A7MWA4_VIBHB
          Length = 200

 Score = 63.0 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 8/179 (4%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           +  +  +A + G S R ++N  +QG+  +  G  G + L  + A I + ++        +
Sbjct: 10  KFTQLDIATLLGISSRQVRNLTQQGVLPVAKGRNGIDPLACTHAYITYKSQAKTSDSKPE 69

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
             +E EE     E DL    IE  R +L   +A     K                 L ++
Sbjct: 70  TEQENEEAFAKLERDL---KIEERREKLAMLKA-----KRVLFEKTYAPIDTIVDTLEQV 121

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
              + + LD +   ++  +P++    V+ L+  I   +N+ A +   +   +    ++S
Sbjct: 122 CARVGTRLDTLLPKLKNAWPDMPPEAVEVLEAVIAAVLNECADVQPNLSDYIDSDPDES 180


>UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii
           DFL-11 RepID=B9QS27_9RHOB
          Length = 166

 Score = 62.6 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 15/167 (8%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M     Q+ADI G S + +    ++G  +L      +++ Y+    I+ YA R  E    
Sbjct: 1   MYATASQMADILGMSKQNLAKLTQKG--ILTREENESDLPYNVQNTIQAYALRMREQAAG 58

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           +             +      +  ER R T  +A+  E+K A    EV+         +R
Sbjct: 59  R-------------SGGGEYDLVSERARETYHKANLAEIKAAEARKEVISRNLILSAWAR 105

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167
           +     S L G+   ++++ P L +  ++ +  ++   +   A+  E
Sbjct: 106 VMATSRSRLLGLGSRLRKQMPSLTDEQIEIIDNEVHSTLEHLASGGE 152


>UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkholderiales
           RepID=A9C3K6_DELAS
          Length = 180

 Score = 58.0 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +++ + A + G S   +     +G+ V   G  G+E L         Y ER  +    + 
Sbjct: 11  ISQAEFAALIGVSEARVSQLVSEGVIV--RGDTGHEWLLG-------YCERLRDQAAGR- 60

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                     +   L    +  ER  L R+Q +AQ+LKNA    E         VL   +
Sbjct: 61  ----------ASAGLGGLDLVQERAALARSQREAQDLKNAVARGEFAPIGALADVLGLAS 110

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171
             +   +D I   +++  P+L       + R +  A N+   +   + G
Sbjct: 111 SAVVDRMDQIEGQLRKACPDLPEDARVTVLRVLADARNEWIRVTSKLIG 159


>UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodobacter sphaeroides
           RepID=B9KUZ5_RHOSK
          Length = 218

 Score = 56.1 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 56/163 (34%), Gaps = 7/163 (4%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +N+ QLA  F  S  TI  W  QGMPV+  G  G    +       W  ERDA     K 
Sbjct: 29  LNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCYAWRMERDARARAAKA 88

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTR------AQADAQELKNARDSAEVVETAFCTF 116
           + +      A            E   LT       ++A+    + A    ++V       
Sbjct: 89  QGDRLAAQAALAFRNLDEDQAEEEAELTADDLKKWSEAEYHRNRVAEQRGDLVRAGRMRE 148

Query: 117 VLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159
           +L  +     + LD +P   +  F  L    V  L+     A 
Sbjct: 149 LLEELMVSFGNALDTLPDFCELNF-SLSAEQVAKLQERCDAAR 190


>UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium
           HTCC2654 RepID=A3VBF6_9RHOB
          Length = 218

 Score = 54.2 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 9/165 (5%)

Query: 3   VNKKQLADIFGASIRTIQNWQ---EQGMPVLRGGGKGNEVLYDSAAVIKWYAER-----D 54
           VN+ QLA     S  TI  W    E  +PVL  GG G E  +  A    W   R      
Sbjct: 24  VNRYQLAQAMDVSEPTITKWLQDLENPLPVLEVGGNGREYKFRLADCYAWRMARNDAEQL 83

Query: 55  AEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC 114
           A+ E  +   ++  L + ++    P +    R     A AD    + A    E+V  +  
Sbjct: 84  AKDEASRSAAQLALLFRNADDGTDPESFLTARQVKDEADADYARNRAAELRGELVRASRV 143

Query: 115 TFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159
             +   +  E       +    +  F  L+   VD ++R   + +
Sbjct: 144 EELFELMIDEFKKSATTLADFCEMEFG-LDPAEVDKIQRRADEVL 187


>UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD
          Length = 193

 Score = 51.8 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 13/179 (7%)

Query: 2   EVNKKQLADIFGA-SIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           +  +KQ+A + G  S R ++N   +G+     G  G     D    I  Y    A+    
Sbjct: 10  KFTQKQIATLLGLESDRQVRNLINKGILPAXKGRNG----MDPLKCIHAYIAYKAQ-AGG 64

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                 +      +        E ER    R Q  A+ ++N      ++ T  C  + S 
Sbjct: 65  NAETGTD-----FDGAEPEVDYEVERALNVREQRRARRIQNELALKTLIPTDVCIHIYSS 119

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179
           +     S +  I        P L  +    L+  + +A+   +  DE IP  L  Y+++
Sbjct: 120 LVAAARSKVLAIEGKATTELPGLSVKDRQVLRGLLYEALADLS--DEPIPSSLRAYLDE 176


>UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45
           RepID=D0D597_9RHOB
          Length = 208

 Score = 51.5 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 6/164 (3%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWY-----AERDA 55
           M VN++Q A     S   I  + EQG+PVL  G  G    +  + V  W      A R  
Sbjct: 21  MTVNRRQCATALDVSEPMITRYLEQGLPVLSRGSNGQAYEFQLSEVYAWKMWRDAAARKQ 80

Query: 56  EIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115
           +   E+   ++  L +  + +         +     A AD +  K A    E+  T+   
Sbjct: 81  DEAAEQAAMQMRMLFRNDDDEESGAGTLTAQEIAQEADADYKRNKAAELRGELTRTSRVR 140

Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159
            V   +  E  + +  +    +  F  L    V+ ++R    A+
Sbjct: 141 EVFEEVLVEFRNQVTTLVDFAEMEF-SLAPDQVEKMQRRCDAAL 183


>UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkholderiales
           RepID=A9IRX2_BORPD
          Length = 147

 Score = 48.8 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 4/126 (3%)

Query: 43  SAAVIKWYAERDAEIENEKLRREVEELLQA--SETDLQPGTIEYERHRLTRAQADAQELK 100
           SA  I+  AE+       +    +   ++A   +       ++ ER RL RAQAD  EL+
Sbjct: 10  SARRIRQLAEQGTLERVGRNEYALGPSIRALIDDAAGTGSVLQRERTRLVRAQADEAELR 69

Query: 101 NARDSAEVVETAFCTFVLSRIAGEIASILDGIPLS-VQRRFPEL-ENRHVDFLKRDIIKA 158
            A     V        V +   G I + +  +P   V +   E  E+R    L+ +II+A
Sbjct: 70  LAEAKKLVAPIEQYAEVWAHRCGIIRANMLNVPGRVVSQLLGENDESRFKATLRAEIIEA 129

Query: 159 MNKAAA 164
           +  +A 
Sbjct: 130 LKASAD 135


>UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=Clostridium sp. M62/1
           RepID=UPI0001973662
          Length = 185

 Score = 48.4 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 11/149 (7%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A +FG ++R +Q   ++G+       +GN   Y+ A  I+ Y +  ++    K + E E
Sbjct: 15  IASLFGVTVRRVQQLTQEGIISTTKTKEGN--RYELAPTIQRYVKYLSDKAYGKSKSEKE 72

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
             L+  +   +          L  +Q +   LK    S + ++        SR       
Sbjct: 73  AELREQKLQAEIA--------LKESQGEMHRLKTEIASGKYIDIEEVKMDYSRFFVSFKK 124

Query: 128 ILDGIPLSVQ-RRFPELENRHVDFLKRDI 155
               +P  +  R     +   +  +++D+
Sbjct: 125 FALSLPSRLSGRISGHCDPMEIRSIEKDL 153


>UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria
           RepID=B6IPX8_RHOCS
          Length = 196

 Score = 48.0 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 19/130 (14%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A +   S R +Q    +G+      G      YD    ++ Y     ++          
Sbjct: 11  IAKLLDLSERRVQQLSREGVIPKAERG-----AYDLVGAVRGYVRYLRDL---------- 55

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
               A         +  ER RL +A+AD  EL   +   ++V  A      + +   + +
Sbjct: 56  ----AQRAQGGVADLPTERTRLVKAKADLAELDAQQRRGDLVPVAETALAWAAVTARLRA 111

Query: 128 ILDGIPLSVQ 137
            L  +P  + 
Sbjct: 112 RLITLPDKLA 121


>UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans
           LB400 RepID=Q141S7_BURXL
          Length = 215

 Score = 47.2 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 60/180 (33%), Gaps = 23/180 (12%)

Query: 3   VNKKQLADIFGASIRTIQNW--QEQGMPVLRGGGKGNEVLYDSAAVIKWYA--------- 51
           + K  L +  G +   +      +   PV + G +     +D AAV  +           
Sbjct: 27  IGKAALCEALGWTRPRLDRRLDGDGNFPVAKRGTRAGGWEFDLAAVRTYLGVAPKEAGEP 86

Query: 52  --ERDAEIENEKLRREVEELLQASETDLQPGTIE--------YERHRLTRAQADAQELKN 101
                ++ +            +   T + P  +E          R R    QA+  E K 
Sbjct: 87  TPAPASKTQGRAPIDSRTPFAEPKYTVVPPAGVEPVVHAGEQTARQRRDAVQAEILEDKL 146

Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRR--FPELENRHVDFLKRDIIKAM 159
            RD  E+V+      VL+ +   +   LD +   V  R   PE     +  +  D+ +AM
Sbjct: 147 RRDRGELVQVEVMRQVLNTMLAHLGKGLDRLSDQVVERCGLPEEYADQIRAVTDDLRRAM 206


>UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax=Synechocystis sp.
           PCC 6803 RepID=Q6ZE75_SYNY3
          Length = 177

 Score = 47.2 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 13/128 (10%)

Query: 7   QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66
           +LA   G S+RT+Q W + G    +G        YD     +WY           LR+++
Sbjct: 3   ELAQEAGVSVRTVQTWAKAGYFSKQG-----SNAYDILGYYRWYTR--------SLRQDL 49

Query: 67  EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126
           +E                 R R + A+A   EL+      +VV        + ++     
Sbjct: 50  DEHKAKVARSDWDTKWREGRARKSLAEASLVELQMQSKVKQVVPIDLVISEIDKVLSSSI 109

Query: 127 SILDGIPL 134
            +   +P 
Sbjct: 110 RLFRDLPS 117


>UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis
           KT71 RepID=A4ACG7_9GAMM
          Length = 181

 Score = 47.2 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 12/131 (9%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V   Q A     +     N       V      G +  Y      +    +  E+ + ++
Sbjct: 10  VTSTQAAAFLDVTKSRFFN-----CGVKPAAKIGRQNYY----CPRELRLKALELASRRV 60

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             +  +  + SE        E +R R  +A+ADA E+KN      ++   F   +LS +A
Sbjct: 61  TSDAPDKAEVSEA---RHRFEIDRARKIKAEADAIEMKNEVRRNNLIPLRFMEILLSGVA 117

Query: 123 GEIASILDGIP 133
            +    LD IP
Sbjct: 118 TDFRQFLDQIP 128


>UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM
           3645 RepID=A3ZUY4_9PLAN
          Length = 180

 Score = 46.1 bits (107), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 25/160 (15%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            + + A  FG + RTI+ W+ +G PV+  G       Y   A+ +W              
Sbjct: 18  TQARAAAFFGVNPRTIKEWRRRGAPVIETGIANAPYRYALGAISQWLIA----------- 66

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAE---VVETAFCTFVLSR 120
              E   QA++        + ER +L + Q  A +L N     +   +V T  C   + +
Sbjct: 67  ---EREAQAAKEAPSASGSDLERQKL-QEQVRALQLGNDLRQTKYVRLVNTLVCRKAVEK 122

Query: 121 IAG----EIASILDGIPLSVQRRFPELENRHVDFLKRDII 156
                  +I +  + +P  +    P    ++ D L+ +  
Sbjct: 123 TFKWSCDKIRNRCESLPSEIVATMP---AKYRDDLQEEAA 159


>UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1
          Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP
          Length = 233

 Score = 44.5 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 1  MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAER 53
          M +N  QLA+ FG +   +++W   +G+P +R  G+   +++D A V+ W AER
Sbjct: 1  MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAER 51


>UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio
           peptidovorans DSM 11002 RepID=C1TKR1_9BACT
          Length = 176

 Score = 44.5 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 43/152 (28%), Gaps = 20/152 (13%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++ K+ A  FG + +T+  W+  G P    G       +D   V +W    + +      
Sbjct: 18  LSTKRCAAFFGVTSKTMSEWKRSGCPQAGRG------WWDPEEVYRWRCGLETD------ 65

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                                       +A+A  +E++        +         +   
Sbjct: 66  --------SPDNDGNWQAVKLKAEAEYRKAKAAQEEIRLKVLEGRYIPFEQVEDAWADRL 117

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRD 154
               + + G   ++      +    ++ +  +
Sbjct: 118 VICRTNMFGWVNTLPPLLEGMSRTEMEKILGE 149


>UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter oxydans
           RepID=Q5FNI0_GLUOX
          Length = 200

 Score = 44.5 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           +NK Q+A     S+ T+ NW ++    P    G  G    ++  AV  + A R  E E  
Sbjct: 9   LNKAQMAKRLKVSLPTLTNWIDRWPDFPADHRGTNGKSWRFNPHAVFDFLAARREEEEKA 68

Query: 61  KLRREVEELLQASETDLQPGTIEYERHR---LTRAQADAQELKNARDS-----AEVVETA 112
            + R+ + +    + D      E         T+ Q D   L++ +        ++V   
Sbjct: 69  TIGRDEKLMELQLQFDDLFAEEEQPARSGFVSTKEQIDIWRLRDLKRKEAERCGKLVIAD 128

Query: 113 FCTFVLSRIAGEIA 126
               +++     +A
Sbjct: 129 QMQDMMATAFAMLA 142


>UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax=Rhizobium etli Kim 5
           RepID=UPI000190538F
          Length = 126

 Score = 44.1 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 10/96 (10%)

Query: 38  EVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQ 97
               D   V++W  +R  EI  E+     +               +  + R   AQA   
Sbjct: 1   SWELDLGDVVRWLEDRAGEIAAERFGASEDGKTSE----------DEAKRRRAVAQAVVA 50

Query: 98  ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133
           EL        V+  A    + S     I   L  IP
Sbjct: 51  ELDMLERLRSVIPIADVLDLWSTDYAAIRDKLMSIP 86


>UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989
           RepID=B7LD26_ECO55
          Length = 173

 Score = 43.8 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 32/167 (19%)

Query: 7   QLADIFGASIRTIQ-NWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65
           ++A+  G +  T+   W ++GMP  +   K          + +W                
Sbjct: 9   EIAERMGVNDSTVSREWAKRGMPHPKKASK--------KEIDQWI--------------- 45

Query: 66  VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125
           +  ++Q          IE E+ R    +AD  E++    + +V+ T + T  L+     +
Sbjct: 46  LINIIQPLRNTDVKEQIEKEKLRKISLEADLVEIELNISTEKVLSTDYVTQTLTGYFAAL 105

Query: 126 ASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172
             +L  IP S+     E E+     +K +          +DE + GL
Sbjct: 106 RGVLRSIPASIYVELFESEDADTLRIKLE--------ERIDEKLRGL 144


>UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Escherichia coli SE11
           RepID=B6I861_ECOSE
          Length = 188

 Score = 43.4 bits (100), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 66/175 (37%), Gaps = 19/175 (10%)

Query: 4   NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++ ++A     S R +++  +  G PV +G G              W  +         L
Sbjct: 3   SQAEVAAHLLLSDRRLRDLAKLPGAPVPQGRG-------------DWELDAWRHFYIHYL 49

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEV-----VETAFCTFV 117
           R    + +   E ++   + E  R +  + +   + +  AR    +           +  
Sbjct: 50  RSNRRDTVGTDEPEVGDNSPEKNREQWLKNEERQERILMARVKRRILAKRYAPIELISVA 109

Query: 118 LSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172
           +SR+A E+ + ++  P  +++ +PE+       L+ ++  A+N+ A +       
Sbjct: 110 VSRVAVELRTRVESWPPRLKKVWPEMPQEASSVLREELAIALNELADIRVDFSDY 164


>UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens
           MI-1 RepID=A4J3T3_DESRM
          Length = 183

 Score = 42.6 bits (98), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 27/169 (15%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V   +LA I G S   I+     G+    G GK     YD A+ ++ Y     +  +++ 
Sbjct: 9   VGTSELALILGLSDSRIRQLDRSGIITKVGRGK-----YDLASAVQGYCNYLKDAASQEG 63

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                                 E+  L R +    EL+      E+        VL+ + 
Sbjct: 64  LS--------------------EKDLLDRTRRKKLELEIQIMQGELHRAEDVKRVLNDML 103

Query: 123 GEIASILDGIPLSVQ-RRFPELE-NRHVDFLKRDIIKAMNKAAALDELI 169
           G   +    IP  +  +   + E     + +K+ I +A+++ +  +  +
Sbjct: 104 GAFRARCLAIPHKLAPQLLGKKELPSIQEGIKKAIYEALSELSDYNPRV 152


>UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9J9F0_AGRRK
          Length = 214

 Score = 42.2 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 18/171 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           +  K  L+ +   S+RT+++   +   V          LY +   +         +   +
Sbjct: 53  QCTKADLSVLMNVSMRTLRDLDSREKLVRAP----KSGLYMTVPTLNACWAHIRLVAAGR 108

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
           ++                     ER +    +   +E+      +EV+         S  
Sbjct: 109 VKEAESPHA-------------TERLKSATVERQIREIALKNLKSEVLTLEEIDGAWSTF 155

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM-NKAAALDELIPG 171
           A ++ +++  +P  V+ R P +     + L+  +   + + AA +D  + G
Sbjct: 156 ASQLKAVMLAVPGKVRSRIPHITAHDQETLRTIVKDMLVDLAAEVDASVIG 206


>UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1 subunit of terminase
          n=1 Tax=Magnetospirillum magnetotacticum MS-1
          RepID=UPI0000383339
          Length = 110

 Score = 41.8 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
          V+  +LA + G    TI +W ++ G+PV+RGG  G E   D  A + W   +      + 
Sbjct: 27 VSITELAALTGYHRDTISDWVKRWGLPVVRGGAHGIEYQIDVRAFVDWPEAQAKAEALKN 86

Query: 62 LRR 64
             
Sbjct: 87 APA 89


>UniRef50_A6XRQ1 Putative uncharacterized protein n=1 Tax=Vibrio cholerae AM-19226
           RepID=A6XRQ1_VIBCH
          Length = 171

 Score = 41.8 bits (96), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 59/149 (39%), Gaps = 13/149 (8%)

Query: 31  RGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLT 90
            GGGKG  ++ +S   I+W  +R+ + +  +  +E         T  + GT + E   LT
Sbjct: 14  GGGGKGKPLVIESEKAIQWIIDREVQKQIGQFEKE--------RTAPKVGTKDGEDLLLT 65

Query: 91  RAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFP--ELENRHV 148
            A+    E++  +    V++       L  +     + LDGI               +  
Sbjct: 66  AAKRRKAEVEAKKAEEAVMDLGEIAQFLYMVGNLFGNELDGIGARTALEVSSEHEPAKCK 125

Query: 149 DFLKRDIIKAMNKAAALDELIPGLLSEYI 177
           + + R+  +  +  A   + +   ++EY+
Sbjct: 126 NIIDRESRRIRSATA---DRLSAFVAEYL 151


>UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A9W3_GEMAT
          Length = 169

 Score = 41.1 bits (94), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 19/133 (14%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMP-VLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++ Q+A I G +  TI+   ++G P V   G +G +   D+   + W+ ER+     EK 
Sbjct: 8   SQTQMAAILGVTSPTIRAAIDEGAPGVHAQGSRGTKGKIDATQFVPWWIERERSRAREKD 67

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
           + + +  ++          IE +R +L +               E +  A     L  +A
Sbjct: 68  KGQSQAAIER------ELDIEMKREKLLKE------------KREALPRAVMVNTLRDVA 109

Query: 123 GEIASILDGIPLS 135
             +   +  +P  
Sbjct: 110 TRLNVTITQMPDR 122


>UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7AY59_RUMGN
          Length = 180

 Score = 40.7 bits (93), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 18/169 (10%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
           M+VN+K+LA I G + R ++  + + G+       +  +  Y     +  Y     E E 
Sbjct: 1   MDVNQKELAAILGITDRRVRQLKNEFGLFSKGLSSEKKQKNYVLEKCVPEYINYKLEAEV 60

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
           ++                     E E+    + +     LK  +   E+ E       L+
Sbjct: 61  QQG---------------TGYNKEKEQAEHEQIKKKISILKLRKLKRELHEADDVEEFLT 105

Query: 120 RIAGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166
            +     + L  +P  V       +  N  +D L+R+I + + + +  D
Sbjct: 106 DMLVNFKNRLLSVPQKVAPLIVSEDDVNVILDILEREIFQTLEELSEYD 154


>UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylobacterium
          extorquens AM1 RepID=C5B657_METEA
          Length = 105

 Score = 39.9 bits (91), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 4  NKKQLADIFGASIRTIQNWQEQGMPVL-RGGGKGNEVLYDSAAVIKWYAER 53
          +  ++AD+ G S  T+  W   GMP        G   L D    ++W   R
Sbjct: 36 SASKVADLLGVSRATVAKWIRDGMPTEGSEPAPGKPYLIDIGIAVRWLQGR 86


>UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteurellaceae
           RepID=B8F4L1_HAEPS
          Length = 170

 Score = 39.9 bits (91), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 24/163 (14%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           +++N  Q+A++ G   +T+        P L    K    LY    +I             
Sbjct: 22  LKLNINQIAEVTGLHRQTVSQRVAGLTPSLGSNSKLK--LYSLRDLI------------- 66

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                   L   +E             R    QA+ + LK  R++ E++     +  +S 
Sbjct: 67  --------LTGLTEKMSADVDSLSPNDRRAFWQAENERLKYERETRELIPAFEVSQEMSI 118

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
           +A  +   L+ +P  ++R    L+ + +  +++ I    ++ A
Sbjct: 119 LAKAVVQTLETLPDILERDCG-LQPKDLIRVQQVIDDIRDQMA 160


>UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
           RepID=B7LNB9_ESCF3
          Length = 172

 Score = 39.9 bits (91), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 67  EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126
           E L + +  +L          R    Q++ + LK  +++ E++  +  +   + +A  + 
Sbjct: 58  ELLGRTTTPELVAVDKMTPPDRKAWFQSERERLKFQQETGELIPASEVSREFASMAKAVV 117

Query: 127 SILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
            +L+ +P  ++R    +    V  +++ I    ++ A
Sbjct: 118 QVLETLPDILERDCA-MTPSAVVRVQKVIDDLRDQIA 153


>UniRef50_D1YLG3 Conserved domain protein n=2 Tax=Lactobacillus gasseri 224-1
          RepID=D1YLG3_9LACO
          Length = 104

 Score = 39.9 bits (91), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
          +N+K++A  FG +  TI  W   GMP+    G+    LY   ++ +W   ++   + +  
Sbjct: 35 LNRKEVAKYFGVADSTISYWATLGMPIAVIDGR---KLYGKQSITEWLKSKEQPKKEQNK 91

Query: 63 R 63
          +
Sbjct: 92 K 92


>UniRef50_Q1WDJ1 Putative uncharacterized protein n=1 Tax=Streptomyces phage mu1/6
          RepID=Q1WDJ1_9CAUD
          Length = 81

 Score = 39.9 bits (91), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
          + ++Q+   +G S  T+  W  +G PV+R         +D A V  W AE+ A    ++ 
Sbjct: 12 LQQQQVQAHYGVSDWTVNQWVRKGCPVVRLPNGHR--RFDLAEVKAWMAEQSATGREQRR 69

Query: 63 RREVEELLQAS 73
          R+    L Q S
Sbjct: 70 RQSEHALSQRS 80


>UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francisella
           RepID=A0Q4V8_FRATN
          Length = 174

 Score = 39.1 bits (89), Expect = 0.071,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 19/164 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V+   L++      R IQ    Q   +L+  GK     Y     +  Y     +    K 
Sbjct: 8   VSSGVLSEYLSIGERRIQQLTSQD--ILKKTGK---NQYPLKENVNRYIAYLQDRAGGKS 62

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
            +E+                + ++ RLT+ QAD Q++K      +VV        L+ + 
Sbjct: 63  EQEL------------NIEFKKQKLRLTKFQADEQQVKAELAQKKVVAVNDVISSLADLF 110

Query: 123 GEIASILDGIPLSVQ-RRFPELENRHVD-FLKRDIIKAMNKAAA 164
             +   L  IP   +   F E +    +  L  +I +A+ +   
Sbjct: 111 ALMREKLLNIPERAEYEIFGETDKDIFNQKLSTEIKEALFEICD 154


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS...   178   9e-44
UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS...   158   6e-38
UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O6431...   142   5e-33
UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enter...   131   1e-29
UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH            126   4e-28
UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepI...   123   2e-27
UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=1...   122   6e-27
UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root Rep...   117   1e-25
UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio ...   117   2e-25
UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID...   115   8e-25
UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. E...   113   3e-24
UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of termi...   109   5e-23
UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitroba...   107   2e-22
UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella ...   101   1e-20
UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD     99   3e-20
UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polarom...    98   1e-19
UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenz...    98   2e-19
UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of term...    97   3e-19
UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodoba...    95   2e-18
UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreic...    93   3e-18
UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 ...    93   4e-18
UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomi...    93   6e-18
UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodoba...    92   7e-18
UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitroba...    91   1e-17
UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalk...    90   3e-17
UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of termi...    89   6e-17
UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethios...    88   1e-16
UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=...    88   2e-16
UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae...    86   6e-16
UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of term...    84   2e-15
UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongk...    83   3e-15
UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkhol...    83   4e-15
UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkhol...    79   9e-14
UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclass...    75   1e-12
UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congreg...    73   5e-12
UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax...    70   3e-11
UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastop...    68   1e-10
UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkhol...    68   2e-10
UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter ...    67   2e-10
UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphapr...    67   3e-10
UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax...    57   3e-07
UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protei...    44   0.002

Sequences not found previously or not previously below threshold:

UniRef50_A8SB65 Putative uncharacterized protein n=1 Tax=Faecali...    69   5e-11
UniRef50_B1HTP3 Putative uncharacterized protein n=1 Tax=Lysinib...    69   7e-11
UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfo...    66   5e-10
UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylo...    66   6e-10
UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminoc...    65   9e-10
UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Esc...    63   6e-09
UniRef50_C7H6G3 Putative uncharacterized protein n=2 Tax=Clostri...    62   8e-09
UniRef50_B0PEX8 Putative uncharacterized protein n=1 Tax=Anaerot...    61   2e-08
UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francis...    60   4e-08
UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Ma...    59   5e-08
UniRef50_C9MV79 Transcriptional regulator, MerR family n=2 Tax=F...    58   1e-07
UniRef50_C2BG35 Putative uncharacterized protein n=1 Tax=Anaeroc...    58   2e-07
UniRef50_Q0BEI9 Putative uncharacterized protein n=11 Tax=Burkho...    56   5e-07
UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root Re...    54   3e-06
UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobac...    53   5e-06
UniRef50_B6IMM8 Putative uncharacterized protein n=1 Tax=Rhodosp...    53   7e-06
UniRef50_A8GLM5 Putative uncharacterized protein n=1 Tax=Serrati...    52   7e-06
UniRef50_A5V8D7 Putative uncharacterized protein n=1 Tax=Sphingo...    51   2e-05
UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax...    50   3e-05
UniRef50_B8L8I9 Putative uncharacterized protein n=1 Tax=Stenotr...    49   9e-05
UniRef50_A9C2C3 Putative uncharacterized protein n=1 Tax=Delftia...    48   1e-04
UniRef50_B0P604 Putative uncharacterized protein n=1 Tax=Anaerot...    48   1e-04
UniRef50_A5Z445 Putative uncharacterized protein n=1 Tax=Eubacte...    48   2e-04
UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escheri...    48   2e-04
UniRef50_D1Y312 Putative uncharacterized protein n=1 Tax=Pyramid...    47   3e-04
UniRef50_A7MG09 Putative uncharacterized protein n=1 Tax=Cronoba...    47   4e-04
UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteur...    45   0.001
UniRef50_A4U1Y8 BACTERIOPHAGE-RELATED PROTEIN n=2 Tax=Magnetospi...    45   0.001
UniRef50_Q2SAJ6 Putative uncharacterized protein n=2 Tax=Proteob...    45   0.001
UniRef50_C7G5Z1 Putative uncharacterized protein n=1 Tax=Rosebur...    45   0.001
UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmati...    45   0.001
UniRef50_C0PVV4 Gifsy-2 prophage protein n=12 Tax=Salmonella ent...    44   0.002
UniRef50_D0H0S3 Putative uncharacterized protein n=1 Tax=Vibrio ...    44   0.002
UniRef50_C8TRT6 Predicted terminase small subunit n=10 Tax=root ...    44   0.002
UniRef50_B0U9E3 Putative uncharacterized protein n=1 Tax=Methylo...    44   0.002
UniRef50_A8A1J3 Putative membrane protein n=2 Tax=Escherichia co...    44   0.002
UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterob...    44   0.003
UniRef50_B2JD13 Putative uncharacterized protein n=2 Tax=Burkhol...    44   0.003
UniRef50_Q89JP3 Bll5240 protein n=1 Tax=Bradyrhizobium japonicum...    43   0.004
UniRef50_B3H0X8 Putative uncharacterized protein n=4 Tax=Pasteur...    43   0.005
UniRef50_Q48KF6 Putative uncharacterized protein n=1 Tax=Pseudom...    43   0.006
UniRef50_Q31QA7 Putative uncharacterized protein n=2 Tax=Synecho...    43   0.006
UniRef50_A0NRU5 Putative uncharacterized protein n=1 Tax=Labrenz...    43   0.007
UniRef50_B2UKQ5 Putative uncharacterized protein n=1 Tax=Akkerma...    43   0.007
UniRef50_C1CPH0 Transcriptional regulator, AlpA family n=4 Tax=S...    43   0.007
UniRef50_Q830E1 Conserved domain protein n=7 Tax=Enterococcus fa...    42   0.008
UniRef50_Q2W853 Putative uncharacterized protein n=5 Tax=Proteob...    42   0.008
UniRef50_D1AA53 N-6 DNA methylase n=1 Tax=Thermomonospora curvat...    42   0.008
UniRef50_Q53574 Putative uncharacterized protein orf G n=1 Tax=S...    42   0.010
UniRef50_Q72FM0 Putative uncharacterized protein n=3 Tax=Desulfo...    41   0.015
UniRef50_C8NRQ9 Putative uncharacterized protein n=2 Tax=Coryneb...    41   0.015
UniRef50_Q72A11 Putative uncharacterized protein n=2 Tax=Desulfo...    41   0.016
UniRef50_A3LLS2 Putative uncharacterized protein n=1 Tax=Pseudom...    41   0.022
UniRef50_C7Q3S9 Transcriptional regulator, MerR family n=1 Tax=C...    41   0.024
UniRef50_B4CXQ2 Putative uncharacterized protein n=1 Tax=Chthoni...    41   0.024
UniRef50_Q87B59 Phage-related protein n=7 Tax=Xylella fastidiosa...    41   0.025
UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylo...    41   0.026
UniRef50_C6BW00 Putative uncharacterized protein n=1 Tax=Desulfo...    41   0.027
UniRef50_Q1IL58 Putative prophage repressor n=1 Tax=Candidatus K...    40   0.028
UniRef50_C4S5Y0 DNA-directed RNA polymerase, sigma subunit (Sigm...    40   0.031
UniRef50_Q6VY86 Putative uncharacterized protein n=1 Tax=Strepto...    40   0.041
UniRef50_A0L9B4 Putative uncharacterized protein n=5 Tax=Proteob...    39   0.050
UniRef50_Q398F6 Putative uncharacterized protein n=1 Tax=Burkhol...    39   0.056
UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1...    39   0.074
UniRef50_B2UKR7 Putative uncharacterized protein n=1 Tax=Akkerma...    39   0.089
UniRef50_C7VU90 Predicted protein n=3 Tax=Enterococcus RepID=C7V...    39   0.095

>UniRef50_P03707 Terminase small subunit n=72 Tax=root RepID=TERS_LAMBD
          Length = 181

 Score =  178 bits (450), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 178/181 (98%), Positives = 179/181 (98%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE
Sbjct: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           KLRREVEEL QASE DLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR
Sbjct: 61  KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           IAGEIASILDG+PLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS
Sbjct: 121 IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180

Query: 181 G 181
           G
Sbjct: 181 G 181


>UniRef50_P68654 Terminase small subunit n=43 Tax=root RepID=TERS_BPP21
          Length = 182

 Score =  158 bits (400), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 93/181 (51%), Positives = 133/181 (73%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M+VNKK+LA+IF    RTI+ WQ QG+P    G KG E ++D+A  I+WYA+R+ +IENE
Sbjct: 1   MKVNKKRLAEIFNVDPRTIERWQSQGLPCASKGSKGIESVFDTAMAIQWYAQRETDIENE 60

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           KLR+E+++L  A+E+DLQPGTI+YER+RLT+AQADAQELKNAR+   V+ET   TF+L R
Sbjct: 61  KLRKELDDLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR 120

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           +A EI+ IL  +PL++QR++P++   H+D +K +I KA N AA   E + G + ++    
Sbjct: 121 VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE 180

Query: 181 G 181
           G
Sbjct: 181 G 181


>UniRef50_O64316 Gp1 n=1 Tax=Enterobacteria phage N15 RepID=O64316_BPN15
          Length = 168

 Score =  142 bits (358), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 92/179 (51%), Positives = 114/179 (63%), Gaps = 16/179 (8%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +NK  +A   G S++    W  Q +       +G EV +D  +V+    E  +       
Sbjct: 5   LNKSDMASSLGISVQAFDKWGVQPV-----EKRGREVFFDVRSVVDNRLENQSRKLQPSP 59

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             + +              I+YER RLTRA ADA EL N +   EVVETAFCTFVLSRIA
Sbjct: 60  GDDDD-----------GVNIDYERWRLTRANADAAELANEKKRREVVETAFCTFVLSRIA 108

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181
            EI+SILDGIPLS+QRRFPELENRH++FLK D+IKAMNKAAALDE IPGLL++YI+QSG
Sbjct: 109 AEISSILDGIPLSMQRRFPELENRHIEFLKGDVIKAMNKAAALDERIPGLLNDYIDQSG 167


>UniRef50_B7ULU1 Predicted terminase small subunit n=39 Tax=Enterobacteriaceae
           RepID=B7ULU1_ECO27
          Length = 169

 Score =  131 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 14/178 (7%)

Query: 4   NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
            + ++A     + R ++  Q+  G P+    G       D  A   +Y       +N+  
Sbjct: 3   TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             + E        D     +   R  LT  QA  Q+LKN     ++++T FC F LS++A
Sbjct: 58  DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
             ++S LD IPLS+QR+FP+L  RH+D LK  I K  N+ A   + +P LL EYI  +
Sbjct: 110 MALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 167


>UniRef50_B1ERZ8 Gp1 n=4 Tax=Escherichia RepID=B1ERZ8_9ESCH
          Length = 159

 Score =  126 bits (316), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 16/173 (9%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A   G S++    W   G+P +    +G EVLYD   V++   +R+    N++   +  
Sbjct: 1   MASSIGISVQAFDKW---GVPPVER--RGREVLYDVKTVLE--IDRERRQHNQRTPDDGG 53

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
           EL +          +   R  LT  QA AQ+LKN     +++++ FC F LS++A  ++S
Sbjct: 54  ELEE---------RLLRARAELTEEQAVAQKLKNQVTEGKLIDSDFCVFALSKLAMALSS 104

Query: 128 ILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
            LD IPLS+QR+FP+L  RH+D LK  I K  N+ A   + +P LL EYI  +
Sbjct: 105 TLDSIPLSMQRQFPDLTPRHIDHLKTLIAKGANQCARAGDKLPDLLDEYIRAT 157


>UniRef50_A6X1C0 Regulatory protein MerR n=2 Tax=Rhizobiales RepID=A6X1C0_OCHA4
          Length = 302

 Score =  123 bits (309), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 18/170 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           E+    LA+I G S R I ++ E+G+ V  G  +     +D    ++ Y E    I   +
Sbjct: 128 EITAADLAEILGVSKRAISDYVERGIIVKTGRNR-----FDLRKSVQLYCEHLRGIAAGR 182

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
               V+             T+  ER RL R QAD   L+NA    E+V  A        I
Sbjct: 183 GGDNVD-------------TLATERARLAREQADQAALRNAAMRKELVPIAEVRNEWVSI 229

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171
           A  + +++  +P   ++  P L    VD +  +I  A+ +    D+    
Sbjct: 230 ARRVRNVMMAVPSRCRQMLPHLTTFDVDLIDEEIRTALTELGEKDDDDGS 279


>UniRef50_A1Z2S0 Phage DNA packaging protein NU1-like protein n=16
           Tax=Enterobacteriaceae RepID=A1Z2S0_ECOLX
          Length = 180

 Score =  122 bits (305), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 103/179 (57%), Gaps = 19/179 (10%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD-AEIENEK 61
           +NKK +A     S      W      V     KG E  YD A+VI+       +++ N+K
Sbjct: 6   MNKKNMAKSCRVSATAFDKWG-----VTPVERKGREAFYDVASVIENRVNNAISQLINDK 60

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
              + +ELL+              R RL  AQA+AQELKN RD  +V++T FC + LS++
Sbjct: 61  GEIDDDELLRV-------------RIRLLTAQAEAQELKNDRDRGDVIDTEFCLYALSKL 107

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
           A +I+SI+D +PL++QR FP++    +D LKR+++KA N +A + + +P +L++Y++++
Sbjct: 108 ASQISSIMDSLPLTMQRSFPQITPAMLDRLKREVVKACNASARVADNLPQILADYLKET 166


>UniRef50_B3G2H2 Phage DNA packaging protein Nu1 n=6 Tax=root RepID=B3G2H2_PSEAE
          Length = 169

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 11/175 (6%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +NK ++A   G S +    W  Q +        G E  Y  A V++   +  A  +  + 
Sbjct: 1   MNKSEMASSLGISPQAFDKWGVQPI-----ERIGREAFYTVADVVENRIQHAARKQQPEG 55

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                  L           +   R  LTRAQ  AQE KN  +   +V   F T+ L++IA
Sbjct: 56  E------LPEGVDPYVEAKLMQARLELTRAQTYAQEQKNQVNDKLLVPVPFATYALAKIA 109

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
            +I S L+ +  +V +R PE++   ++  +R+I  A N +A   + +PG L EY+
Sbjct: 110 AKIGSKLETVGKTVSQRHPEMDPLILEAFEREIALARNLSADFGDDLPGYLDEYL 164


>UniRef50_A7MWA4 Putative uncharacterized protein n=2 Tax=Vibrio harveyi group
           RepID=A7MWA4_VIBHB
          Length = 200

 Score =  117 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 8/179 (4%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           +  +  +A + G S R ++N  +QG+  +  G  G + L  + A I + ++        +
Sbjct: 10  KFTQLDIATLLGISSRQVRNLTQQGVLPVAKGRNGIDPLACTHAYITYKSQAKTSDSKPE 69

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
             +E EE     E DL    IE  R +L   +A     K                 L ++
Sbjct: 70  TEQENEEAFAKLERDL---KIEERREKLAMLKA-----KRVLFEKTYAPIDTIVDTLEQV 121

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
              + + LD +   ++  +P++    V+ L+  I   +N+ A +   +   +    ++S
Sbjct: 122 CARVGTRLDTLLPKLKNAWPDMPPEAVEVLEAVIAAVLNECADVQPNLSDYIDSDPDES 180


>UniRef50_A6WJC0 Phage DNA packaging Nu1 n=6 Tax=Shewanella RepID=A6WJC0_SHEB8
          Length = 177

 Score =  115 bits (287), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 15/175 (8%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++K  L      S +    W    +PV      G   LY  A V+      + +      
Sbjct: 14  LSKTDLCKSLEISTQAFDKW---DVPV--HSKLGRVCLYKMADVVGNRLANERK------ 62

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
               + + +  E D     ++YER RL RAQA  QE+KN +D  EVVE  F TFVL+RIA
Sbjct: 63  ----KTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIA 118

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
            +IA +LD I + V+R+FP++  R +D +K ++IK+ N AA L E I GLL EYI
Sbjct: 119 AQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYI 173


>UniRef50_A3JIS8 DNA packaging protein n=1 Tax=Marinobacter sp. ELB17
           RepID=A3JIS8_9ALTE
          Length = 165

 Score =  113 bits (282), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 24/177 (13%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +N++Q+A     ++     W+ +  PV R    G +V YD+ +V++              
Sbjct: 10  LNQQQMAKSLNLTVSAFARWEVE--PVAR---IGKQVFYDAYSVLENR------------ 52

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                  L  +      G IE ER RLT AQA+ QELKN     ++      T  LS +A
Sbjct: 53  -------LSKAGPAGSNGDIEAERLRLTSAQAEGQELKNELSKGKIAPIEIITLSLSTVA 105

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179
           G  A ILD +PL+++R++PEL  + ++ +KR  +KA N+ + LD ++   L +Y+ +
Sbjct: 106 GAAAGILDSLPLNIKRQYPELSAQMIEAIKRQCVKAQNEISRLDSVVVDKLEDYLNE 162


>UniRef50_A6WZU0 Phage DNA packaging protein Nu1 subunit of terminase-like protein
           n=1 Tax=Ochrobactrum anthropi ATCC 49188
           RepID=A6WZU0_OCHA4
          Length = 173

 Score =  109 bits (271), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 10/162 (6%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++K   + +   S   +      GMPV R G        D A    W +E      N   
Sbjct: 20  ISKSGFSKLINVSPGRVSQMITAGMPVERDGK------IDVARCKLWISEN----INPTR 69

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                +       + Q  ++  ER RL +AQADA ELKNA    E+V  +    + S   
Sbjct: 70  AASQAQGATLFGEEKQAISLTAERARLAKAQADAVELKNATIRRELVSASEVERLWSGEW 129

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164
            ++ S +  +P  +++  P L    ++ +  ++ + + +   
Sbjct: 130 MQLRSSVLAVPSRLRQLLPHLTAEDIEAIDGELRRMLTEFGN 171


>UniRef50_Q1QKR3 Putative uncharacterized protein n=2 Tax=Nitrobacter hamburgensis
           X14 RepID=Q1QKR3_NITHX
          Length = 182

 Score =  107 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 17/167 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           EV+ K+LA++FG S R+++   ++G       G+     Y     ++ Y      +   +
Sbjct: 10  EVSAKELAELFGISDRSVRELHDRGTVKKSARGR-----YLLTESVQLYTAHLRGVAAGR 64

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
                               +  ER RL + QADA  LKNA    E+V  +        +
Sbjct: 65  GGE------------GGVLDLTVERARLAKEQADAVSLKNAVMRRELVPVSDVEREWMSV 112

Query: 122 AGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDEL 168
             ++ S +  +P  V++  P L     D + R+I  A+   A  D  
Sbjct: 113 GRQVRSGMLAVPSRVRQSLPHLTAFDADLIDREIRDALTGLADNDSD 159


>UniRef50_Q87CG5 Phage-related packaging protein n=8 Tax=Xylella fastidiosa
           RepID=Q87CG5_XYLFT
          Length = 191

 Score =  101 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           +VN+  L++IFG ++ T+  W   G PV++ GG+G E  +D+A V +W  ++ AE     
Sbjct: 24  QVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGG 83

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
              ++EE                 + R   A+A  +EL  A    +V         L+R+
Sbjct: 84  AVADIEEW----------------KRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARV 127

Query: 122 AGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166
             E+ + L  IP            E R+   L ++I + +   A+LD
Sbjct: 128 FAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD 174


>UniRef50_Q8H9P4 ORF21 n=1 Tax=Vibrio phage VHML RepID=Q8H9P4_9CAUD
          Length = 193

 Score =   99 bits (247), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 13/179 (7%)

Query: 2   EVNKKQLADIFGA-SIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           +  +KQ+A + G  S R ++N   +G+     G  G     D    I  Y    A+    
Sbjct: 10  KFTQKQIATLLGLESDRQVRNLINKGILPAXKGRNG----MDPLKCIHAYIAYKAQ---- 61

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                  E     +        E ER    R Q  A+ ++N      ++ T  C  + S 
Sbjct: 62  --AGGNAETGTDFDGAEPEVDYEVERALNVREQRRARRIQNELALKTLIPTDVCIHIYSS 119

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179
           +     S +  I        P L  +    L+  + +A+   +  DE IP  L  Y+++
Sbjct: 120 LVAAARSKVLAIEGKATTELPGLSVKDRQVLRGLLYEALADLS--DEPIPSSLRAYLDE 176


>UniRef50_A1VPI8 Putative uncharacterized protein n=1 Tax=Polaromonas
           naphthalenivorans CJ2 RepID=A1VPI8_POLNA
          Length = 168

 Score = 98.4 bits (243), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 61/174 (35%), Gaps = 27/174 (15%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            ++Q+A +FG + +TI  WQ  G P+   GG G    YDS A I W   R+         
Sbjct: 5   GQEQIAALFGVAPKTITEWQVLGFPIAFQGGPGVPSEYDSPACITWMVGRE--------- 55

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                        +     E  + RL+R Q D  E    RD   ++  +    +      
Sbjct: 56  -------------VSKIRSETPKDRLSRLQGDKIERDMMRDDGLLIPASEIEPMWEGAVI 102

Query: 124 EIASILDGIPLSVQ-----RRFPELENRHVDFLKRDIIKAMNKAAALDELIPGL 172
                L G P  +         P LE       +  ++K  N  AA+ +   G 
Sbjct: 103 AAREYLLGEPPRIASLSIGMEKPALEELLRTTFEAYLVKLSNWRAAMQDDDEGK 156


>UniRef50_B9QS27 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii
           DFL-11 RepID=B9QS27_9RHOB
          Length = 166

 Score = 97.6 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 65/167 (38%), Gaps = 15/167 (8%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M     Q+ADI G S + +    ++G  +L      +++ Y+    I+ YA R  E    
Sbjct: 1   MYATASQMADILGMSKQNLAKLTQKG--ILTREENESDLPYNVQNTIQAYALRMREQAAG 58

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           +                    +  ER R T  +A+  E+K A    EV+         +R
Sbjct: 59  RS-------------GGGEYDLVSERARETYHKANLAEIKAAEARKEVISRNLILSAWAR 105

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDE 167
           +     S L G+   ++++ P L +  ++ +  ++   +   A+  E
Sbjct: 106 VMATSRSRLLGLGSRLRKQMPSLTDEQIEIIDNEVHSTLEHLASGGE 152


>UniRef50_C6M4E7 Phage DNA packaging protein, Nu1 subunit of terminase n=1
           Tax=Neisseria sicca ATCC 29256 RepID=C6M4E7_NEISI
          Length = 163

 Score = 96.8 bits (239), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 69/184 (37%), Gaps = 27/184 (14%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGG-KGNEVLYDSAAVIKWYAERDAEIEN 59
           M+VNK+QLADI G + + + NWQ++G+PV       G    YD+ AVI+W  +R+ E  N
Sbjct: 1   MKVNKRQLADIVGVTEQALTNWQKEGLPVAAYADKNGLANEYDTVAVIRWMFQRELERLN 60

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
                                  E  R RL R +A+  EL+      ++   A       
Sbjct: 61  ----------------------KEKPRDRLDRVKAELAELERDEKLGQLAPAAMFERAWG 98

Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYI 177
                  +    +P  +           +  D +   I +A+ K +       G   +  
Sbjct: 99  DHVLAARTEFLTMPEQLAAELTATSGVEIDPDTIAAYINRALEKLSNYGAENDG--DDSR 156

Query: 178 EQSG 181
             +G
Sbjct: 157 NHAG 160


>UniRef50_A3VBF6 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium
           HTCC2654 RepID=A3VBF6_9RHOB
          Length = 218

 Score = 94.5 bits (233), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 9/165 (5%)

Query: 3   VNKKQLADIFGASIRTIQNWQE---QGMPVLRGGGKGNEVLYDSAAVIKWYAER-----D 54
           VN+ QLA     S  TI  W +     +PVL  GG G E  +  A    W   R      
Sbjct: 24  VNRYQLAQAMDVSEPTITKWLQDLENPLPVLEVGGNGREYKFRLADCYAWRMARNDAEQL 83

Query: 55  AEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFC 114
           A+ E  +   ++  L + ++    P +    R     A AD    + A    E+V  +  
Sbjct: 84  AKDEASRSAAQLALLFRNADDGTDPESFLTARQVKDEADADYARNRAAELRGELVRASRV 143

Query: 115 TFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159
             +   +  E       +    +  F  L+   VD ++R   + +
Sbjct: 144 EELFELMIDEFKKSATTLADFCEMEFG-LDPAEVDKIQRRADEVL 187


>UniRef50_D0D597 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45
           RepID=D0D597_9RHOB
          Length = 208

 Score = 93.4 bits (230), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 6/164 (3%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWY-----AERDA 55
           M VN++Q A     S   I  + EQG+PVL  G  G    +  + V  W      A R  
Sbjct: 21  MTVNRRQCATALDVSEPMITRYLEQGLPVLSRGSNGQAYEFQLSEVYAWKMWRDAAARKQ 80

Query: 56  EIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115
           +   E+   ++  L +  + +         +     A AD +  K A    E+  T+   
Sbjct: 81  DEAAEQAAMQMRMLFRNDDDEESGAGTLTAQEIAQEADADYKRNKAAELRGELTRTSRVR 140

Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159
            V   +  E  + +  +    +  F  L    V+ ++R    A+
Sbjct: 141 EVFEEVLVEFRNQVTTLVDFAEMEF-SLAPDQVEKMQRRCDAAL 183


>UniRef50_B2TZ59 Putative Prophage Qin DNA packaging protein NU1 homolog n=15
           Tax=Enterobacteriaceae RepID=B2TZ59_SHIB3
          Length = 139

 Score = 93.0 bits (229), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 4   NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
            + ++A     + R ++  Q+  G P+    G       D  A   +Y       +N+  
Sbjct: 3   TQTEVARHLSLTDRQLRRLQKLPGAPISNKRG-----QLDLDAWRDFYISYLRRSKNDVP 57

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             + E        D     +   R  LT  QA  Q+LKN     ++++T FC F LS++A
Sbjct: 58  DGDSE--------DDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGFCIFALSKLA 109

Query: 123 GEIASILDGIPLSVQRRFPE 142
             ++S LD IPLS+QR+FP 
Sbjct: 110 MALSSTLDSIPLSMQRQFPG 129


>UniRef50_D2LK71 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii
           ATCC 17100 RepID=D2LK71_RHOVA
          Length = 174

 Score = 92.6 bits (228), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 19/164 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V+  +L++  G S + I+     G+      G+     Y   A ++ +A+          
Sbjct: 30  VSTFELSEWLGVSNQRIREMARAGLIPTITPGR-----YKLKAAVRAWAD---------- 74

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                +         Q   +   + R   A AD  EL N     E++  +      + + 
Sbjct: 75  ----WQRTSRPGMGSQSLALTAAKTRAAEATADKLELHNQAARRELIAASDVERAWATVL 130

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166
            ++ + +  +P  VQ+R   L    +  +  +I  A+++AA  +
Sbjct: 131 RDVRAGMLSVPSRVQQRMGHLTKHDILAIDAEIRTALSEAAHAE 174


>UniRef50_B9KUZ5 Putative uncharacterized protein n=3 Tax=Rhodobacter sphaeroides
           RepID=B9KUZ5_RHOSK
          Length = 218

 Score = 92.2 bits (227), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 56/163 (34%), Gaps = 7/163 (4%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +N+ QLA  F  S  TI  W  QGMPV+  G  G    +       W  ERDA     K 
Sbjct: 29  LNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCYAWRMERDARARAAKA 88

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTR------AQADAQELKNARDSAEVVETAFCTF 116
           + +      A            E   LT       ++A+    + A    ++V       
Sbjct: 89  QGDRLAAQAALAFRNLDEDQAEEEAELTADDLKKWSEAEYHRNRVAEQRGDLVRAGRMRE 148

Query: 117 VLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159
           +L  +     + LD +P   +  F  L    V  L+     A 
Sbjct: 149 LLEELMVSFGNALDTLPDFCELNF-SLSAEQVAKLQERCDAAR 190


>UniRef50_A3WW78 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A
           RepID=A3WW78_9BRAD
          Length = 151

 Score = 91.4 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V  KQLAD+ G +   ++  Q+ G+    G  K     Y     I+ Y E    + + + 
Sbjct: 5   VTAKQLADLIGITTEHVRRHQQAGVVFKTGRDK-----YLLRESIRGYCEHLRGVASGRG 59

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                        D    T+  ER R  R  AD   LKNA    E+V         + I 
Sbjct: 60  G------------DSAVATLTAERARQAREHADNTALKNAALRKELVPATDVVRGWADIL 107

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLK 152
            ++ + L  +P  V ++ P L     + + 
Sbjct: 108 TKVRAALLAVPSRVWQQAPHLTAEDKNIID 137


>UniRef50_B9ZR38 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZR38_9GAMM
          Length = 181

 Score = 90.3 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           + + K ++A     S  T+  W ++G PV   G  G    +D AAV+ W  +R       
Sbjct: 3   LRLTKAEMAKALDVSTNTVGAWVKRGCPVQEQGRPGKPYTFDLAAVVSWLTDR------- 55

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                      +        +   ER  L R +  A EL+  R    VV+ A    ++  
Sbjct: 56  ------PAAAGSEAEAEDAASYRAERAALMRVRRQAAELEYQRQRRAVVDRAKAKRLIHE 109

Query: 121 IAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIKAMNKAAAL 165
           I   +A      P  V             R    L R + + +   A  
Sbjct: 110 IGQALAKPWAQWPARVYAEIAAELQADGARVHQVLDRHVHRHLEDLARA 158


>UniRef50_A4WNS7 Phage DNA packaging protein Nu1 subunit of terminase-like protein
           n=2 Tax=Rhodobacter RepID=A4WNS7_RHOS5
          Length = 163

 Score = 89.1 bits (219), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           + +    L ++   +   + + +++G+ V RG        YD AA +  Y      I   
Sbjct: 15  LRIGASDLCELLSLTPGALSDLKKRGIAVHRGHD-----AYDLAATVTAYVVHLRGIAAG 69

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
           +   E               ++  ER RL + QADAQ LKN     E+V  +      S 
Sbjct: 70  RGGEE------------HTASLTAERARLAKEQADAQALKNGALRGELVAASEVERAWSD 117

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALD 166
              ++ S +  +P  + R+   L    VD L R++  A+ +    D
Sbjct: 118 TLRKVRSRILAVPSRL-RQVVTLAPAEVDALDRELRDALMELGNAD 162


>UniRef50_C1TKR1 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio
           peptidovorans DSM 11002 RepID=C1TKR1_9BACT
          Length = 176

 Score = 88.3 bits (217), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 17/157 (10%), Positives = 46/157 (29%), Gaps = 20/157 (12%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++ K+ A  FG + +T+  W+  G P    G       +D   V +W    + +      
Sbjct: 18  LSTKRCAAFFGVTSKTMSEWKRSGCPQAGRG------WWDPEEVYRWRCGLETD------ 65

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                                       +A+A  +E++        +         +   
Sbjct: 66  --------SPDNDGNWQAVKLKAEAEYRKAKAAQEEIRLKVLEGRYIPFEQVEDAWADRL 117

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAM 159
               + + G   ++      +    ++ +  + I+ +
Sbjct: 118 VICRTNMFGWVNTLPPLLEGMSRTEMEKILGEEIRIL 154


>UniRef50_UPI0001973662 hypothetical protein ClM62_08936 n=1 Tax=Clostridium sp. M62/1
           RepID=UPI0001973662
          Length = 185

 Score = 87.6 bits (215), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 15/164 (9%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A +FG ++R +Q   ++G+       +G    Y+ A  I+ Y +  ++    K + E E
Sbjct: 15  IASLFGVTVRRVQQLTQEGIISTTKTKEG--NRYELAPTIQRYVKYLSDKAYGKSKSEKE 72

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
             L+  +              L  +Q +   LK    S + ++        SR       
Sbjct: 73  AELREQK--------LQAEIALKESQGEMHRLKTEIASGKYIDIEEVKMDYSRFFVSFKK 124

Query: 128 ILDGIPLSVQ-RRFPELENRHVDFLK----RDIIKAMNKAAALD 166
               +P  +  R     +   +  ++     +II+ +N      
Sbjct: 125 FALSLPSRLSGRISGHCDPMEIRSIEKDLNAEIIRLLNSFVVAG 168


>UniRef50_Q1GH30 Terminase small subunit n=2 Tax=Rhodobacteraceae RepID=Q1GH30_SILST
          Length = 184

 Score = 85.7 bits (210), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 19/168 (11%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           EVN+ +LA+I G S+ T+  W  +G PV++ GG+G    +++A V  W            
Sbjct: 12  EVNRAELANINGVSLPTVDEWVRRGCPVVQRGGRGRAWKFNTAEVRSWR----------- 60

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
                ++ ++A  +     T +    R   A+ +  EL  AR   E+V        L++ 
Sbjct: 61  -----DDDIRAQASHTGMATKDELTLRKLAAETEQAELDLARAKEELVPVEQFDRALAKA 115

Query: 122 AGEIASILDG-IPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALD 166
            GE+ + +   +P    RR      E +    L  ++ + +   A  D
Sbjct: 116 FGEVRAGIRNVLPSRAARRLIGESDETQIKAVLLDEVDQVLEALADTD 163


>UniRef50_Q2SI57 Phage DNA packaging protein, Nu1 subunit of terminase n=1
           Tax=Hahella chejuensis KCTC 2396 RepID=Q2SI57_HAHCH
          Length = 174

 Score = 84.1 bits (206), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 25/170 (14%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQ-EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
           M+VNKKQLADIFG S RT   +Q +   P++   G+G    YD+ AV  +  +R      
Sbjct: 1   MKVNKKQLADIFGISERTFTQYQKDPDFPIVLDAGRGASNQYDTVAVFNFLKDR------ 54

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
                            L     E  R RL R +A+ + L   RD  E+V  +    +L 
Sbjct: 55  ----------------ALSGAKFESARDRLDRIRAERETLALGRDLGELVPASELEALLE 98

Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDE 167
           ++   I + L      ++       +  V  D L     +A+   AAL +
Sbjct: 99  QVVTAIKTTLLDSNHILKTELDARYDIDVEPDILDEHSRQALTHLAALGD 148


>UniRef50_C1D857 Terminase small subunit n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D857_LARHH
          Length = 171

 Score = 83.3 bits (204), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 24/166 (14%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           VNK++L+ I G S RT+  WQ +GMPV+   G+G+   YD+AAVIKWY  R A       
Sbjct: 5   VNKRELSLILGISERTLTEWQREGMPVVTHTGRGSANQYDTAAVIKWYGARVA------- 57

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                             + E  + RL R + D  E++ A++   +V        L +  
Sbjct: 58  ---------------NGASKESAKDRLDRLRGDQVEIEIAKELRRLVAIDEIEPALGQFV 102

Query: 123 GEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALD 166
            +  S++  +P        E    +     L+  +I+   +    +
Sbjct: 103 ADAVSLMAALPDKYTTVISEAVSPDAIHAVLEDMLIELREQLGNYE 148


>UniRef50_A9C3K6 Putative uncharacterized protein n=3 Tax=Burkholderiales
           RepID=A9C3K6_DELAS
          Length = 180

 Score = 83.3 bits (204), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +++ + A + G S   +     +G+ V   G  G+E L         Y ER  +    + 
Sbjct: 11  ISQAEFAALIGVSEARVSQLVSEGVIV--RGDTGHEWLLG-------YCERLRDQAAGR- 60

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                     +   L    +  ER  L R+Q +AQ+LKNA    E         VL   +
Sbjct: 61  ----------ASAGLGGLDLVQERAALARSQREAQDLKNAVARGEFAPIGALADVLGLAS 110

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171
             +   +D I   +++  P+L       + R +  A N+   +   + G
Sbjct: 111 SAVVDRMDQIEGQLRKACPDLPEDARVTVLRVLADARNEWIRVTSKLIG 159


>UniRef50_Q141S7 Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans
           LB400 RepID=Q141S7_BURXL
          Length = 215

 Score = 78.7 bits (192), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 23/182 (12%)

Query: 3   VNKKQLADIFGASIRTIQNW--QEQGMPVLRGGGKGNEVLYDSAAVIKWYA--------- 51
           + K  L +  G +   +      +   PV + G +     +D AAV  +           
Sbjct: 27  IGKAALCEALGWTRPRLDRRLDGDGNFPVAKRGTRAGGWEFDLAAVRTYLGVAPKEAGEP 86

Query: 52  --ERDAEIENEKLRREVEELLQASETDLQPGTIE--------YERHRLTRAQADAQELKN 101
                ++ +            +   T + P  +E          R R    QA+  E K 
Sbjct: 87  TPAPASKTQGRAPIDSRTPFAEPKYTVVPPAGVEPVVHAGEQTARQRRDAVQAEILEDKL 146

Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRR--FPELENRHVDFLKRDIIKAM 159
            RD  E+V+      VL+ +   +   LD +   V  R   PE     +  +  D+ +AM
Sbjct: 147 RRDRGELVQVEVMRQVLNTMLAHLGKGLDRLSDQVVERCGLPEEYADQIRAVTDDLRRAM 206

Query: 160 NK 161
             
Sbjct: 207 AD 208


>UniRef50_B0ZSE9 Putative terminase small subunit n=2 Tax=unclassified Myoviridae
           RepID=B0ZSE9_9CAUD
          Length = 191

 Score = 74.9 bits (182), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V+KK  A + G S R I  W ++GMP   GGGKG  +  D+   I W   R+   +    
Sbjct: 5   VSKKMFAKMVGKSERWIGKWVDEGMPTAGGGGKGRVLEIDTEDAIDWLIRREVRRQYGDD 64

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             E E+ +         G+   E   L +A+ +  ++        +V       +L  + 
Sbjct: 65  DDETEDGV---------GSASAEDRLLKKARREKLQIDIDLARRRLVPLDAVGRILQGVG 115

Query: 123 GEIASILDGIPLSVQRRFP--ELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQ 179
              A+ LD +   +       +   +  + +  +  +     A         +   ++ 
Sbjct: 116 AVFATQLDSLSSRLASDLAVIDDPAKVRERIHAETRRIRGSTAERLNDAASSIVAELDA 174


>UniRef50_A4ACG7 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis
           KT71 RepID=A4ACG7_9GAMM
          Length = 181

 Score = 72.9 bits (177), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 12/131 (9%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V   Q A     +     N       V      G +  Y      +    +  E+ + ++
Sbjct: 10  VTSTQAAAFLDVTKSRFFN-----CGVKPAAKIGRQNYY----CPRELRLKALELASRRV 60

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             +  +  + SE        E +R R  +A+ADA E+KN      ++   F   +LS +A
Sbjct: 61  TSDAPDKAEVSEA---RHRFEIDRARKIKAEADAIEMKNEVRRNNLIPLRFMEILLSGVA 117

Query: 123 GEIASILDGIP 133
            +    LD IP
Sbjct: 118 TDFRQFLDQIP 128


>UniRef50_Q6ZE75 Putative uncharacterized protein sll8017 n=1 Tax=Synechocystis sp.
           PCC 6803 RepID=Q6ZE75_SYNY3
          Length = 177

 Score = 70.2 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 13/129 (10%)

Query: 6   KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65
            +LA   G S+RT+Q W + G    +G        YD     +WY             ++
Sbjct: 2   TELAQEAGVSVRTVQTWAKAGYFSKQG-----SNAYDILGYYRWYTRSLR--------QD 48

Query: 66  VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125
           ++E                 R R + A+A   EL+      +VV        + ++    
Sbjct: 49  LDEHKAKVARSDWDTKWREGRARKSLAEASLVELQMQSKVKQVVPIDLVISEIDKVLSSS 108

Query: 126 ASILDGIPL 134
             +   +P 
Sbjct: 109 IRLFRDLPS 117


>UniRef50_A8SB65 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8SB65_9FIRM
          Length = 180

 Score = 69.5 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 10/158 (6%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A +F  ++R IQ   + G+ +      G    YD    I+ Y +  ++    +  +  E
Sbjct: 15  IAQLFNVTVRRIQQLTQDGV-LETVRVPGQRNKYDLIPTIQAYVKYLSDKAYGRESKLSE 73

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
             L+                 L  +Q +  +LK A  S + +          R       
Sbjct: 74  TELRE--------KKLQAETALKESQVELHQLKTAIASGKYISVEEVKLDYQRFFVTFKK 125

Query: 128 ILDGIPLSVQRRFPE-LENRHVDFLKRDIIKAMNKAAA 164
              G+P  V       ++      L+RD+ + +N    
Sbjct: 126 FAAGLPNRVIGLVGGYVDPVTARTLERDMTQEVNNLLR 163


>UniRef50_B1HTP3 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus
           C3-41 RepID=B1HTP3_LYSSC
          Length = 192

 Score = 69.1 bits (167), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 65/167 (38%), Gaps = 19/167 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           VN K +A +F  + R ++   E+G+      G+     YD    +  Y            
Sbjct: 15  VNTKSIAKMFNMTERNVRYLVEEGVISRVTHGR-----YDLIDTVSRYITFL-------- 61

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
               +      +      +++YE+    +A+ +  E++ A    E+ +      V + + 
Sbjct: 62  ----KMSFDGIDESKVMESLDYEKWLHEKAKREKAEIELAHIKKEMHKADEVEKVQNHMV 117

Query: 123 GEIASILDGIPLSVQRRFPE-LENRHVDFL-KRDIIKAMNKAAALDE 167
               S +  +P  V  +     + + ++ + +RDI +A+++ A  + 
Sbjct: 118 MAFRSKMLSLPSKVALQLVNKNDPKLIEAILERDIHEALSELAKYNP 164


>UniRef50_A3ZUY4 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM
           3645 RepID=A3ZUY4_9PLAN
          Length = 180

 Score = 68.3 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 25/160 (15%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            + + A  FG + RTI+ W+ +G PV+  G       Y   A+ +W              
Sbjct: 18  TQARAAAFFGVNPRTIKEWRRRGAPVIETGIANAPYRYALGAISQWLIA----------- 66

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAE---VVETAFCTFVLSR 120
              E   QA++        + ER +L + Q  A +L N     +   +V T  C   + +
Sbjct: 67  ---EREAQAAKEAPSASGSDLERQKL-QEQVRALQLGNDLRQTKYVRLVNTLVCRKAVEK 122

Query: 121 IAG----EIASILDGIPLSVQRRFPELENRHVDFLKRDII 156
                  +I +  + +P  +    P    ++ D L+ +  
Sbjct: 123 TFKWSCDKIRNRCESLPSEIVATMP---AKYRDDLQEEAA 159


>UniRef50_A9IRX2 Putative uncharacterized protein n=2 Tax=Burkholderiales
           RepID=A9IRX2_BORPD
          Length = 147

 Score = 67.9 bits (164), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 57/160 (35%), Gaps = 28/160 (17%)

Query: 7   QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66
           QLA + G S R I+   EQG        +     Y     I+   +              
Sbjct: 2   QLAALAGVSARRIRQLAEQGTL-----ERVGRNEYALGPSIRALID-------------- 42

Query: 67  EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126
                  +       ++ ER RL RAQAD  EL+ A     V        V +   G I 
Sbjct: 43  -------DAAGTGSVLQRERTRLVRAQADEAELRLAEAKKLVAPIEQYAEVWAHRCGIIR 95

Query: 127 SILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAA 164
           + +  +P  V  +      E+R    L+ +II+A+  +A 
Sbjct: 96  ANMLNVPGRVVSQLLGENDESRFKATLRAEIIEALKASAD 135


>UniRef50_Q5FNI0 Phage DNA packing protein n=1 Tax=Gluconobacter oxydans
           RepID=Q5FNI0_GLUOX
          Length = 200

 Score = 67.2 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIE 58
           + +NK Q+A     S+ T+ NW ++    P    G  G    ++  AV  + A R  E E
Sbjct: 7   VTLNKAQMAKRLKVSLPTLTNWIDRWPDFPADHRGTNGKSWRFNPHAVFDFLAARREEEE 66

Query: 59  NEKLRREVEELLQASETDLQPGTIEYERHR---LTRAQADAQELKNARDS-----AEVVE 110
              + R+ + +    + D      E         T+ Q D   L++ +        ++V 
Sbjct: 67  KATIGRDEKLMELQLQFDDLFAEEEQPARSGFVSTKEQIDIWRLRDLKRKEAERCGKLVI 126

Query: 111 TAFCTFVLSRIAGEIAS 127
                 +++     +A 
Sbjct: 127 ADQMQDMMATAFAMLAR 143


>UniRef50_B6IPX8 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria
           RepID=B6IPX8_RHOCS
          Length = 196

 Score = 66.8 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 21/157 (13%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A +   S R +Q    +G+      G      YD    ++ Y     ++          
Sbjct: 11  IAKLLDLSERRVQQLSREGVIPKAERG-----AYDLVGAVRGYVRYLRDLA--------- 56

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
                         +  ER RL +A+AD  EL   +   ++V  A      + +   + +
Sbjct: 57  -----QRAQGGVADLPTERTRLVKAKADLAELDAQQRRGDLVPVAETALAWAAVTARLRA 111

Query: 128 ILDGIPLSVQRRFPE--LENRHVDFLKRDIIKAMNKA 162
            L  +P  +     +          L+  I++A+ + 
Sbjct: 112 RLITLPDKLAPLVHDAANPAAVRVLLRSAIVEALAEL 148


>UniRef50_A4J3T3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens
           MI-1 RepID=A4J3T3_DESRM
          Length = 183

 Score = 66.4 bits (160), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 27/169 (15%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V   +LA I G S   I+     G+    G GK     YD A+ ++ Y     +  +++ 
Sbjct: 9   VGTSELALILGLSDSRIRQLDRSGIITKVGRGK-----YDLASAVQGYCNYLKDAASQEG 63

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                                 E+  L R +    EL+      E+        VL+ + 
Sbjct: 64  --------------------LSEKDLLDRTRRKKLELEIQIMQGELHRAEDVKRVLNDML 103

Query: 123 GEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALDELI 169
           G   +    IP  +  +    +      + +K+ I +A+++ +  +  +
Sbjct: 104 GAFRARCLAIPHKLAPQLLGKKELPSIQEGIKKAIYEALSELSDYNPRV 152


>UniRef50_B9D1V0 Putative uncharacterized protein n=1 Tax=Campylobacter rectus
           RM3267 RepID=B9D1V0_WOLRE
          Length = 148

 Score = 66.0 bits (159), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 24/162 (14%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M+V  K+L+DI   + R IQ+ + +G+    G        +D    ++ Y E        
Sbjct: 1   MDVTTKELSDILSLTQRRIQDLENEGVITKIGR-----NKWDLKECVQSYIEY------- 48

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                                +   R +   A A+ ++L  A    EVV        LS 
Sbjct: 49  -----------KIANATSTYGLTEARAQKEFADAEIKKLILAEKKGEVVPIFKLEKDLSD 97

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKA 162
           IA  +++ L  +P  ++ R   L +   + L  +I + + + 
Sbjct: 98  IASTLSNRLYNLPNKIKMRV-NLSDETQNALNYEIEETLKEL 138


>UniRef50_A7AY59 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7AY59_RUMGN
          Length = 180

 Score = 65.2 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 18/175 (10%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
           M+VN+K+LA I G + R ++  + + G+       +  +  Y     +  Y     E E 
Sbjct: 1   MDVNQKELAAILGITDRRVRQLKNEFGLFSKGLSSEKKQKNYVLEKCVPEYINYKLEAEV 60

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
           +                      E E+    + +     LK  +   E+ E       L+
Sbjct: 61  Q---------------QGTGYNKEKEQAEHEQIKKKISILKLRKLKRELHEADDVEEFLT 105

Query: 120 RIAGEIASILDGIPLSVQRRF--PELENRHVDFLKRDIIKAMNKAAALDELIPGL 172
            +     + L  +P  V       +  N  +D L+R+I + + + +  D L    
Sbjct: 106 DMLVNFKNRLLSVPQKVAPLIVSEDDVNVILDILEREIFQTLEELSEYDPLKIDK 160


>UniRef50_B6I861 Putative phage DNA packaging protein n=1 Tax=Escherichia coli SE11
           RepID=B6I861_ECOSE
          Length = 188

 Score = 62.5 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 68/176 (38%), Gaps = 9/176 (5%)

Query: 4   NKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++ ++A     S R +++  +  G PV +G G      ++  A   +Y         + +
Sbjct: 3   SQAEVAAHLLLSDRRLRDLAKLPGAPVPQGRGD-----WELDAWRHFYIHYLRSNRRDTV 57

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             +  E+   S    +   ++ E     + +     +K    +         +  +SR+A
Sbjct: 58  GTDEPEVGDNSPEKNREQWLKNEER---QERILMARVKRRILAKRYAPIELISVAVSRVA 114

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIE 178
            E+ + ++  P  +++ +PE+       L+ ++  A+N+ A +           IE
Sbjct: 115 VELRTRVESWPPRLKKVWPEMPQEASSVLREELAIALNELADIRVDFSDYDVSDIE 170


>UniRef50_C7H6G3 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=C7H6G3_9FIRM
          Length = 192

 Score = 62.2 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 62/180 (34%), Gaps = 12/180 (6%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
           N   +A +FG + R IQ   + G+            ++D    ++ Y    ++  N +  
Sbjct: 10  NAAIIAKLFGVTDRRIQQLAKDGIIPAAQK---RPYMFDLLPTVQSYIRYLSDKANGREA 66

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
           +  +      E              + R++AD   ++      ++  +     V + +  
Sbjct: 67  KSADTAQVEME-------KLRAEADMKRSKADMAAMQLKELEGKMHRSEDVEAVTNDLVY 119

Query: 124 EIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181
            + S++  +P  +     ++   N     ++ +  K +N+ A  +           ++ G
Sbjct: 120 TVRSMIMALPGRLAMDVVQVASANEASALIRAECYKILNELANYNYDPAVYQRRVRDREG 179


>UniRef50_B0PEX8 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0PEX8_9FIRM
          Length = 190

 Score = 60.6 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 13/176 (7%)

Query: 8   LADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVE 67
           +A++FG + R +Q   + G+             YD   V+K Y    +E    +  R   
Sbjct: 15  VANLFGVTTRRVQQLVKDGIITATKEK--GVNKYDLHVVVKQYIRHLSEKVQGRESRHNS 72

Query: 68  ELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIAS 127
           EL                  R+  ++A   EL+      ++  +     + + +   I  
Sbjct: 73  EL---------DNQKLGAEIRIKESKARLAELQLQELEGKMHRSEDVEDMTTDLVFTIRG 123

Query: 128 ILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181
           +L  +P  +      L++     + ++ ++   + + A              E+ G
Sbjct: 124 MLVALPGRLAVDLAGLDSPLEISERIRLEVNSILQQLANYRYDPAEYKRRAREREG 179


>UniRef50_A0Q4V8 Putative uncharacterized protein n=4 Tax=Francisella
           RepID=A0Q4V8_FRATN
          Length = 174

 Score = 59.8 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 19/164 (11%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           V+   L++      R IQ    Q +       K  +  Y     +  Y     +    K 
Sbjct: 8   VSSGVLSEYLSIGERRIQQLTSQDIL-----KKTGKNQYPLKENVNRYIAYLQDRAGGKS 62

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
            +E+    +              + RLT+ QAD Q++K      +VV        L+ + 
Sbjct: 63  EQELNIEFKKQ------------KLRLTKFQADEQQVKAELAQKKVVAVNDVISSLADLF 110

Query: 123 GEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAA 164
             +   L  IP   +       ++ +    L  +I +A+ +   
Sbjct: 111 ALMREKLLNIPERAEYEIFGETDKDIFNQKLSTEIKEALFEICD 154


>UniRef50_A0L5S8 Transcriptional regulator, Fis family n=1 Tax=Magnetococcus sp.
           MC-1 RepID=A0L5S8_MAGSM
          Length = 292

 Score = 59.5 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 23/168 (13%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            +  +A     S R +++  ++     R          D   V   Y      + +    
Sbjct: 138 TQADIAAHLDLSERRVRDLLKELGLPARNP--------DLDQVRTAYLRHLRAVASR--- 186

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                             +  ER +L  AQ +  E++  R   E++           +A 
Sbjct: 187 ----------HKSKGGLDLTTERAKLAAAQREKTEIEVTRLRGELIPADEVKQAAFALAR 236

Query: 124 EIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELI 169
            +   L  +P  +                ++  + +A+ + A      
Sbjct: 237 RVRDRLMLVPHRLAVTLAADPNPAAMEQKMEESLREALEELADRAHDD 284


>UniRef50_C9MV79 Transcriptional regulator, MerR family n=2 Tax=Fusobacteriaceae
           RepID=C9MV79_9FUSO
          Length = 189

 Score = 58.3 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 64/166 (38%), Gaps = 21/166 (12%)

Query: 6   KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65
            +LA + G + R ++N   +G+   +   KG  + +     ++ Y E   E +NE     
Sbjct: 12  TELAKLLGITDRHLRNLANEGII--KKTEKGKYLFF---ESVRGYIEYI-ETKNEANVDL 65

Query: 66  VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125
            +E ++             E  +  +   + ++LK      ++   +    V++     +
Sbjct: 66  KDEKIR-------------EEIKKIKKDTELKDLKIKELKNQLHPASIIEKVMTDSLMNL 112

Query: 126 ASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELI 169
              L  +   +  +   L+N     + ++  I++A+ + +  +  +
Sbjct: 113 KGRLLSLSNRLAPQLIALDNLGEIQEVIQDSILEALEELSEYNPEL 158


>UniRef50_C2BG35 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus
           ATCC 51172 RepID=C2BG35_9FIRM
          Length = 173

 Score = 57.5 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 23/164 (14%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
           + + +A +   S R ++  +++G+      G     LY        Y +           
Sbjct: 8   STQAIAKLLNISERRVRQLRDEGIIEETMPG-----LYKLLETNHAYIDYLKGNSK---- 58

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                         +      ER +L +A+   +EL       ++ ET+    V++ +  
Sbjct: 59  ------------IEENLNYYEERAKLVKAKRQNEELDLKIRQRDLHETSEIEEVMADMLT 106

Query: 124 EIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKAMNKAAAL 165
                L  IP  +      L+++      L+  + + +N+ +  
Sbjct: 107 NFKVRLMAIPAKLSPVLAGLKDKTKIYKILQEAVEEGLNELSDF 150


>UniRef50_UPI000190538F hypothetical protein RetlK5_25240 n=1 Tax=Rhizobium etli Kim 5
           RepID=UPI000190538F
          Length = 126

 Score = 56.8 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 11/126 (8%)

Query: 38  EVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQ 97
               D   V++W  +R  EI  E+     +               +  + R   AQA   
Sbjct: 1   SWELDLGDVVRWLEDRAGEIAAERFGASEDGKTSE----------DEAKRRRAVAQAVVA 50

Query: 98  ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRF-PELENRHVDFLKRDII 156
           EL        V+  A    + S     I   L  IP  +     P + +      ++ I 
Sbjct: 51  ELDMLERLRSVIPIADVLDLWSTDYAAIRDKLMSIPDLIAANVDPAIASHVSGIAEKHIR 110

Query: 157 KAMNKA 162
             + K 
Sbjct: 111 NVLAKL 116


>UniRef50_Q0BEI9 Putative uncharacterized protein n=11 Tax=Burkholderia
           RepID=Q0BEI9_BURCM
          Length = 221

 Score = 56.0 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 23/171 (13%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           + ++Q+AD       T+    ++     R              +   Y     E    + 
Sbjct: 34  LTQQQIADHLDLERSTVSRLVDRLNIDYRTAS--------LDEIRVAYLRHLRESAAGRA 85

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                              +  ER    R   + + L  A    ++V  A       ++ 
Sbjct: 86  SE-------------TGIDLVAERAMTERVDREIKLLTLAEKKGQLVNAAQLEQAYGQMV 132

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDF--LKRDIIKAMNKAAALDELIPG 171
           G   + L  +P  + +    L    VD   L   +   + + +  D   PG
Sbjct: 133 GAFQTELLALPDKLVQELRTLYGVEVDVEWLNEHMYGCLQQLSEYDADSPG 183


>UniRef50_Q73IA8 Putative uncharacterized protein n=7 Tax=root RepID=Q73IA8_WOLPM
          Length = 163

 Score = 53.7 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 11/163 (6%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           ++ + + A   G S + +    ++G+  L  G    E   ++ A I+  ++       E 
Sbjct: 5   KITQTEWARELGVSKQYVCYLVKKGIVELEDGLIDREQANEAVAAIRDPSQPLRRKNPEG 64

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
                 +L            +E  R    +A+A+           E++           +
Sbjct: 65  EEVGNNKLSMMLLKTRIKNEMERGRLLEAKAKAEI---------GELISVEEVKTEAFNV 115

Query: 122 AGEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKA 162
           A  + + L  IP  V      +    +  + L  +I  A+ + 
Sbjct: 116 ARVVRNNLLNIPDRVSALLASINDTEKIHETLTEEIRTALEEL 158


>UniRef50_B9J9F0 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9J9F0_AGRRK
          Length = 214

 Score = 52.9 bits (125), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 53/161 (32%), Gaps = 17/161 (10%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            K  L+ +   S+RT+++   +   V          LY +   +         +   +++
Sbjct: 55  TKADLSVLMNVSMRTLRDLDSREKLV----RAPKSGLYMTVPTLNACWAHIRLVAAGRVK 110

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                                ER +    +   +E+      +EV+         S  A 
Sbjct: 111 EAESPHA-------------TERLKSATVERQIREIALKNLKSEVLTLEEIDGAWSTFAS 157

Query: 124 EIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164
           ++ +++  +P  V+ R P +     + L+  +   +   AA
Sbjct: 158 QLKAVMLAVPGKVRSRIPHITAHDQETLRTIVKDMLVDLAA 198


>UniRef50_B6IMM8 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IMM8_RHOCS
          Length = 162

 Score = 52.5 bits (124), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 19/163 (11%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            ++++      + R+I+   ++G+      G       D  A    Y     E+   +  
Sbjct: 3   TQQEVGKHLDLTDRSIRELLDKGVLPNARRG-----ALDLDACRLAYIRHLREVAAGRA- 56

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                             +  ER RL R QAD   L+NA    +++  A  T  ++    
Sbjct: 57  -----------LGPGGDDLTAERARLAREQADHYALRNAALRLDLLPRADITRAVTAAFQ 105

Query: 124 EIASILDGIPLSVQRRFPELE--NRHVDFLKRDIIKAMNKAAA 164
            +      +P  +      L         L   +   + + A 
Sbjct: 106 IVRDRFTALPARLSGPLARLTDPAEVRRRLDDAVQAVLVELAE 148


>UniRef50_A8GLM5 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans
           568 RepID=A8GLM5_SERP5
          Length = 181

 Score = 52.1 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 17/174 (9%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           ++K + A   G S   +      G   ++  G   ++ YD A       ++     +   
Sbjct: 1   MSKAEFARRVGLSRPAVTKLCSSGRIPVKANG---QLDYDIALAAYKRTQQVGREVSADN 57

Query: 63  RREVEELLQASETDLQPGT-------------IEYERHRLTRAQADAQELKNARDSAEVV 109
            +           D                      +      QA  ++L+    +  +V
Sbjct: 58  GKIKASPAAPPPQDFPDSDDSPVAGNSRMIQQFNKAKTIEKTFQAKLRQLEYEEKNKTLV 117

Query: 110 ETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVD-FLKRDIIKAMNKA 162
                    +  A E+   L  IP            R ++  ++ ++ +A  + 
Sbjct: 118 PRTEVEDDAAVAASELRGRLFSIPARAAVVCEGKTAREIERIIETELNQAFEEL 171


>UniRef50_A5V8D7 Putative uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1
           RepID=A5V8D7_SPHWW
          Length = 229

 Score = 51.0 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 11/170 (6%)

Query: 4   NKKQLADIFGA-SIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           N  +LA + G  S  TI+   ++    P+L  G +G     D  A   +  E     E  
Sbjct: 16  NLSELAMMPGMPSEPTIKKLIDENPDFPILTRGDRGVAWEIDLVAAATFIRELQRRAEER 75

Query: 61  KLRREVEELLQASET-DLQPGTIEYERHRLTRAQA------DAQELKNARDSAEVVETAF 113
              R  E      +       +I  +R  LT A        +   +K A    E++    
Sbjct: 76  ARARAAEVNQLGLDLLGADAASIRTDRVELTSADRRALMEEELVAIKLAEKRGELIRKDE 135

Query: 114 CTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
               +S++A      L  +     +R  +L       L++ I       A
Sbjct: 136 AEQAISKLAVAFVERLSSLVARASKRV-DLPRETQVQLQKLIDGDRTWIA 184


>UniRef50_UPI0001A443EF hypothetical protein PcarcW_19609 n=1 Tax=Pectobacterium
           carotovorum subsp. carotovorum WPP14 RepID=UPI0001A443EF
          Length = 167

 Score = 50.2 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 26/182 (14%)

Query: 1   MEVNKKQLADIFGASIRTIQN-WQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
           M ++ + +A  +G    TI+  W ++GMP  +   +          V +W          
Sbjct: 1   MALSYRSIAKQYGYDESTIRQSWAKKGMPDPKSSTE--------LEVRQWIVTN------ 46

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
                    +L           I+ ER R   A+A+  E+   +   E++E       LS
Sbjct: 47  ---------ILNPLRDTDTQEQIQRERLRKLTAEAEQAEISVRQCMDELIEITVVQNELS 97

Query: 120 RIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELIPGLLSEYI 177
                I   L  IP        E E        L+  I + +N+    +  +P   +   
Sbjct: 98  SYLKRIRDHLRTIPNKTYLELCEQEKAIDIKRVLQSRIDEVLNECGRFNYELPQEENNKE 157

Query: 178 EQ 179
           ++
Sbjct: 158 DE 159


>UniRef50_B8L8I9 Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14
           RepID=B8L8I9_9GAMM
          Length = 167

 Score = 48.7 bits (114), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 58/179 (32%), Gaps = 24/179 (13%)

Query: 4   NKKQLADIFGASIRTIQ-NWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +  +LAD FG   RT     +E G+P L    +    +Y  A          A     + 
Sbjct: 12  SVARLADEFGMDRRTASKRLKEAGVPPLTK--RAGHDVYRLADAAPALVNPGAAAFGAEG 69

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
             +  +L                  R    Q++ + LK      ++V  A      + + 
Sbjct: 70  VVDPRDLP--------------PMERRAYYQSENERLKVESTIGQLVPAAEVEADYAELV 115

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181
            ++    D +P  ++R+   L    V  ++ +  +          +  G+  + +  S 
Sbjct: 116 KKVVQFFDTLPDVLERKAG-LTPEQVVKVQDECDRVR------QSMYEGITDDDVRDSA 167


>UniRef50_A9C2C3 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1
           RepID=A9C2C3_DELAS
          Length = 161

 Score = 48.3 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 45/119 (37%), Gaps = 5/119 (4%)

Query: 50  YAERDAEIENEKLRREVEELLQASETDLQPGTIEY----ERHRLTRAQADAQELKNARDS 105
           Y+ + A     ++    +   +  E+     ++       + R   A A   EL+    +
Sbjct: 34  YSPKKAAEVARRIEAGEDVGGEELESADGQLSLTTRHLLAKARKEAALAGLNELQLKVKT 93

Query: 106 AEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAA 164
            E +  A      + +   ++  L  +P +++R+   L    +  ++  I +A++  A 
Sbjct: 94  GEYLPRAAYREATATLVASLSQGLRSLPDTLERKCG-LAPEVLQDIESAIDEALSHIAD 151


>UniRef50_B0P604 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P604_9FIRM
          Length = 188

 Score = 47.9 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 19/166 (11%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           EV+  +LA I G + R ++   E G+      G+     +  A  ++ Y +  A+    +
Sbjct: 13  EVSTTELACILGITGRYVRQMAEDGVLSKVDKGR-----FLLAESVQKYIKYTAKDAMNE 67

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
              ++++  +                 L  ++A   +L+      ++        + S +
Sbjct: 68  EDIKLDKAKR------------TAEVTLKASKAQVAKLEAEEMKGKMHRAEDVEAMTSDL 115

Query: 122 AGEIASILDGIPLSVQRRFP--ELENRHVDFLKRDIIKAMNKAAAL 165
              I   L  +P  +       E      + +++++ K M + A  
Sbjct: 116 VYAIRGALIALPGRLAVDVAAVESPAEASEIIRKEVYKVMRELANY 161


>UniRef50_A5Z445 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
           ATCC 27560 RepID=A5Z445_9FIRM
          Length = 149

 Score = 47.9 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 22/155 (14%)

Query: 14  ASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQAS 73
            + + ++   ++G+   + G      LY  A   + Y +   +   E             
Sbjct: 1   MTPKNVERLTQKGILQTKQG-----NLYALAETNRAYIKYLRDRNPESQEA--------- 46

Query: 74  ETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133
                   +  ER +LT+ +   +EL  A    E+  +     V++ +     S L  IP
Sbjct: 47  ------VDLNEERAKLTKTKRLNEELDLAVKKGELHRSEDIEKVMTAMLINFKSRLSAIP 100

Query: 134 LSVQRRFPELENRHVDF--LKRDIIKAMNKAAALD 166
                +   + ++   F  L   I +A+N+ +  +
Sbjct: 101 AEEADKLAAMTDKAKIFLYLNDKIKEALNELSDFE 135


>UniRef50_B7LD26 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989
           RepID=B7LD26_ECO55
          Length = 173

 Score = 47.5 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 26/165 (15%)

Query: 2   EVNKKQLADIFGASIRTI-QNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
                ++A+  G +  T+ + W ++GMP  +   K     +    +I+            
Sbjct: 4   RYTTNEIAERMGVNDSTVSREWAKRGMPHPKKASKKEIDQWILINIIQ------------ 51

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                                IE E+ R    +AD  E++    + +V+ T + T  L+ 
Sbjct: 52  -----------PLRNTDVKEQIEKEKLRKISLEADLVEIELNISTEKVLSTDYVTQTLTG 100

Query: 121 IAGEIASILDGIPLSV-QRRFPELENRHVD-FLKRDIIKAMNKAA 163
               +  +L  IP S+    F   +   +   L+  I + +    
Sbjct: 101 YFAALRGVLRSIPASIYVELFESEDADTLRIKLEERIDEKLRGLG 145


>UniRef50_D1Y312 Putative uncharacterized protein n=1 Tax=Pyramidobacter piscolens
           W5455 RepID=D1Y312_9BACT
          Length = 164

 Score = 47.1 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 52/169 (30%), Gaps = 18/169 (10%)

Query: 14  ASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQAS 73
            + R ++   +QG+      G+     Y     +  Y        +E    +  E  +  
Sbjct: 1   MTDRRVRQLAQQGILPRDEKGR-----YPMRDCVLAYIAYLKSNPDESASVKELEYRK-- 53

Query: 74  ETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIP 133
                            +A+AD  +L       E++  A           E+ + + G+P
Sbjct: 54  ---------LKAETEERQAKADKAQLDLDERRGELISRADMYREWIGRCVELRAAMLGLP 104

Query: 134 LSVQRRFPELENRHV--DFLKRDIIKAMNKAAALDELIPGLLSEYIEQS 180
             +  RF   + R +  +  +  +   +   +      P   S  ++ +
Sbjct: 105 NELGFRFTADDTRALVEEVSEEFVRTTLETWSREGPFTPRAPSAALDAA 153


>UniRef50_A7MG09 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
           BAA-894 RepID=A7MG09_ENTS8
          Length = 181

 Score = 46.7 bits (109), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 6/130 (4%)

Query: 39  VLYDSAAVIKWYAERDAEIENEKLRR----EVEELLQASETDLQPGTIEYERHRLTRAQA 94
             YD A V + +  R  +I           +   L             + E+ RL +A+A
Sbjct: 10  YGYDPATVSRDWKARGLDISQTDEEIYQWVQDNVLTPLRGQTDLKEETQREQLRLAKAKA 69

Query: 95  DAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLS--VQRRFPELENRHVDFLK 152
           D +E+   +    ++E  + T  LS    ++ ++L  IP +  V+    E  N+  + LK
Sbjct: 70  DIEEMNADQLRRNLIEVDYVTESLSSYLLQLKNMLRSIPNTTYVELFSSEDANQLRETLK 129

Query: 153 RDIIKAMNKA 162
             I + +   
Sbjct: 130 DKIDEVLRDI 139


>UniRef50_B8F4L1 Putative uncharacterized protein n=3 Tax=Pasteurellaceae
           RepID=B8F4L1_HAEPS
          Length = 170

 Score = 45.2 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 24/163 (14%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           +++N  Q+A++ G   +T+        P L  G      LY    +I             
Sbjct: 22  LKLNINQIAEVTGLHRQTVSQRVAGLTPSL--GSNSKLKLYSLRDLI------------- 66

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                   L   +E             R    QA+ + LK  R++ E++     +  +S 
Sbjct: 67  --------LTGLTEKMSADVDSLSPNDRRAFWQAENERLKYERETRELIPAFEVSQEMSI 118

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
           +A  +   L+ +P  ++R    L+ + +  +++ I    ++ A
Sbjct: 119 LAKAVVQTLETLPDILERDCG-LQPKDLIRVQQVIDDIRDQMA 160


>UniRef50_A4U1Y8 BACTERIOPHAGE-RELATED PROTEIN n=2 Tax=Magnetospirillum
           RepID=A4U1Y8_9PROT
          Length = 170

 Score = 45.2 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 36/165 (21%), Gaps = 17/165 (10%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
            K + A   G +   I      G+PV   G          A  + W           K  
Sbjct: 9   TKTEFAARVGLTKGRISQLVADGLPVQPDGTIA------IAEGLAWMEANLDPARRNKGG 62

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                    +       ++   R      Q     L   ++  +V++       +   A 
Sbjct: 63  P-------PAPVATGTLSLAEARRMYMVVQVQRARLAYDKERGQVIDAKEAAAAVFSRAK 115

Query: 124 EIASILDGIPLS----VQRRFPELENRHVDFLKRDIIKAMNKAAA 164
                           +              L R + + +   + 
Sbjct: 116 AERDSHMAWVSRTAPLLAAETGADPQATFAALDRFMREHLEHLSD 160


>UniRef50_Q2SAJ6 Putative uncharacterized protein n=2 Tax=Proteobacteria
           RepID=Q2SAJ6_HAHCH
          Length = 170

 Score = 45.2 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 52/175 (29%), Gaps = 9/175 (5%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M ++ +  A   G S   ++   + G       G  ++   D     + +       +  
Sbjct: 1   MGISIRAYARHRGVSDTAVRKAIQTGRITPEQDGTLDQERAD-----REWERNTESPKVG 55

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
             R  V+             ++   R      +A   +++ AR   E+V+ +     + +
Sbjct: 56  SRRGVVKARTPEDIAGNGNASLLQARTVNEVVKAQTNKVRLARLKGELVDRSQAIAHVFQ 115

Query: 121 IAGEIASILDGIPLS----VQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPG 171
           +A          P      +        +     L+  + + + +   L   + G
Sbjct: 116 LARTERDAWLNWPSRVSPHMAAHLGVDPHAFHVALESAVREHLQELGELRPRVDG 170


>UniRef50_C7G5Z1 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis
           L1-82 RepID=C7G5Z1_9FIRM
          Length = 196

 Score = 44.8 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 56/179 (31%), Gaps = 13/179 (7%)

Query: 5   KKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRR 64
             ++A++F  + R IQ   + G+        G    Y+     K Y +      + K   
Sbjct: 18  TTKMAELFELTARRIQQLTQDGVLKTHDTPAGR--RYNVGEATKDYIKYLRTQLDRKASA 75

Query: 65  EVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGE 124
           + ++L                   +  A+A   EL+ A     +        + + +   
Sbjct: 76  QNDKL---------ETDKLQAEVDIKSAKARVAELQLAELEGTMHRAEDVEAITTDLVFN 126

Query: 125 IASILDGIPLSVQRRFPEL--ENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG 181
           I S+L  +P  +     EL         ++ ++ + +   +              ++ G
Sbjct: 127 IRSMLMAMPGRLAVDTAELASPAETSARIQEEVNEILLSLSQYHYDPEEYKKRVKDRQG 185


>UniRef50_C1A9W3 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A9W3_GEMAT
          Length = 169

 Score = 44.8 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 19/134 (14%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMP-VLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
            ++ Q+A I G +  TI+   ++G P V   G +G +   D+   + W+ ER+     EK
Sbjct: 7   FSQTQMAAILGVTSPTIRAAIDEGAPGVHAQGSRGTKGKIDATQFVPWWIERERSRAREK 66

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
            + + +  ++          IE +R +L + + +A               A     L  +
Sbjct: 67  DKGQSQAAIER------ELDIEMKREKLLKEKREAL------------PRAVMVNTLRDV 108

Query: 122 AGEIASILDGIPLS 135
           A  +   +  +P  
Sbjct: 109 ATRLNVTITQMPDR 122


>UniRef50_C0PVV4 Gifsy-2 prophage protein n=12 Tax=Salmonella enterica
           RepID=C0PVV4_SALPC
          Length = 198

 Score = 44.4 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 60/166 (36%), Gaps = 23/166 (13%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVL-YDSAAVIKWYAERDAEIEN 59
           +E+N  QL+ I GA  +TI +  +    V   GG G+ +  Y    ++            
Sbjct: 29  LELNITQLSAITGAHRQTIASRLKG---VKTSGGNGSNLKIYRLVDILTAM--------- 76

Query: 60  EKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLS 119
                    +   + T            R    Q++   ++  ++   ++  +    V +
Sbjct: 77  ---------MTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYA 127

Query: 120 RIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAAL 165
            +A  +   L+ +P  ++R    L    ++  ++ I +     A++
Sbjct: 128 VMAKTVVKTLEILPDLLERDA-ALPPDALEMTQKIIDQLREDLASM 172


>UniRef50_D0H0S3 Putative uncharacterized protein n=1 Tax=Vibrio mimicus MB-451
           RepID=D0H0S3_VIBMI
          Length = 174

 Score = 44.4 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 56/158 (35%), Gaps = 18/158 (11%)

Query: 6   KQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRRE 65
            ++A+ FG S  T+     +      G  +G++V                +      + +
Sbjct: 16  SKIAECFGMSRNTVSKRLREFNVQPSGKERGSDVY------------ALKDAAPALFKSD 63

Query: 66  VEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEI 125
                   + +  P  +     R    Q++ + +K  +   ++ E+       + +A  +
Sbjct: 64  SLPAGAVFDPNKMPPGM-----RKDWYQSENERVKLEKALGQLCESGDVARNYALLAKSV 118

Query: 126 ASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
             +++ +P  ++R    L    V  +++ I    ++ A
Sbjct: 119 IQVMETMPDVLERDCG-LTPSQVSKVQQSIDDLRDQIA 155


>UniRef50_B1ZSD8 Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1
          Tax=Opitutus terrae PB90-1 RepID=B1ZSD8_OPITP
          Length = 233

 Score = 44.4 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 1  MEVNKKQLADIFGASIRTIQNWQE-QGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
          M +N  QLA+ FG +   +++W   +G+P +R  G+   +++D A V+ W AER    + 
Sbjct: 1  MYLNVIQLAESFGVAESVVESWIRDEGLPCVRDSGR---LMFDRAQVVAWAAERGLVAKA 57

Query: 60 EKLRREVEELLQASETDLQ 78
            L  +      AS  +  
Sbjct: 58 GFLADQPAAAGPASRLESW 76


>UniRef50_C8TRT6 Predicted terminase small subunit n=10 Tax=root RepID=C8TRT6_ECO26
          Length = 175

 Score = 44.1 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 35/88 (39%), Gaps = 1/88 (1%)

Query: 72  ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDG 131
            +   +   +    + R    Q++ + +K  ++  +++       V S +   +  +L+ 
Sbjct: 65  EAADSVHDPSRMEPKERKDWYQSENERIKLEKEQRKLIPVDEVVIVYSSMRKAVVQVLET 124

Query: 132 IPLSVQRRFPELENRHVDFLKRDIIKAM 159
           IP  ++R    L  + V  +++ I    
Sbjct: 125 IPDVLERDC-ALTPQAVGVVQQAIDDLR 151


>UniRef50_B0U9E3 Putative uncharacterized protein n=1 Tax=Methylobacterium sp. 4-46
           RepID=B0U9E3_METS4
          Length = 115

 Score = 44.1 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 75  TDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPL 134
            +        ER RLT A+AD   L+ A+   E+V             G + S L  +P 
Sbjct: 2   DEPAADDYVTERARLTAARADLAGLELAQLRGELVPADDIEATWGAAVGAMRSRLLALPA 61

Query: 135 SVQRRFPEL--ENRHVDFLKRDIIKAMNKA 162
               R   +         ++ ++I  + + 
Sbjct: 62  KTAPRVVTMRTAAEVATLIRGELIDILIEL 91


>UniRef50_A8A1J3 Putative membrane protein n=2 Tax=Escherichia coli
           RepID=A8A1J3_ECOHS
          Length = 187

 Score = 44.1 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 14/176 (7%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSA-----AVIKWYAERDAEI 57
           +N+ Q A   G   +TI  W + G  ++  G   +    D+A           A    + 
Sbjct: 4   MNQSQYAQHSGVDRKTIGRWIKAGRFIVMDGDLIDVEASDAALKKNRDGKDPRASNAKKK 63

Query: 58  ENEKLRREVEELLQASETD---LQPGTIEYERHRLTRAQ--ADAQELKNARDSAEVVETA 112
           +    R + ++ +  +       +   +  E     R    A   +L+  +DS + +E A
Sbjct: 64  KAPAPRNDGDDEIDETVRQIMLTEGAVLSREEAARIRENYMALQAKLQYEKDSGQTIELA 123

Query: 113 FCTFVLSRIAGEIASILDGIPLSVQRRFPEL----ENRHVDFLKRDIIKAMNKAAA 164
               VL     +        P  V            +R  + L   + K ++    
Sbjct: 124 IAEEVLFNAFRQQRDAWLNWPSRVAPLIAADLNVPADRMTEVLIEHVHKHISVLGE 179


>UniRef50_B7LNB9 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
           RepID=B7LNB9_ESCF3
          Length = 172

 Score = 43.7 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           + +N  QLA +     +T+ +      P    G      LY    +++    R       
Sbjct: 12  LRLNINQLAALTNLHRQTVASRLSNVEP--APGSNSRLKLYSVLDILRELLGRTT----- 64

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR 120
                          +L          R    Q++ + LK  +++ E++  +  +   + 
Sbjct: 65  -------------TPELVAVDKMTPPDRKAWFQSERERLKFQQETGELIPASEVSREFAS 111

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
           +A  +  +L+ +P  ++R    +    V  +++ I    ++ A
Sbjct: 112 MAKAVVQVLETLPDILERDC-AMTPSAVVRVQKVIDDLRDQIA 153


>UniRef50_B2JD13 Putative uncharacterized protein n=2 Tax=Burkholderia
           RepID=B2JD13_BURP8
          Length = 197

 Score = 43.7 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 25/191 (13%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLR------GGGKGNEVLYDSAAVIK-------- 48
           +N+ + A + G S +T+  W+E+G  V             N   Y               
Sbjct: 1   MNQSEFAALHGVSRKTVTKWKERGWLVFAGDAIDVKASNANLTRYRRDGAPAVTQSAKQT 60

Query: 49  ---WYAERDAEIENEKLRREVEELLQASETDLQP----GTIEYERHRLTRAQADAQELKN 101
                 +            + E   + +   L       + +  R           +L+ 
Sbjct: 61  AKGNKRQSVTLAAKGVTLEDGESASEVAGRILSGNVELLSFDEARCLKENYLGLMAQLEY 120

Query: 102 ARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSV----QRRFPELENRHVDFLKRDIIK 157
            R S  +VE    T +L              P  V            +R V+ L   + K
Sbjct: 121 ERKSGSLVELDTATAILFEEFRAQRDAWLNWPTRVGPILAADLGVEADRVVETLTAHVHK 180

Query: 158 AMNKAAALDEL 168
            + +    +  
Sbjct: 181 HIAQLGEPEAN 191


>UniRef50_Q89JP3 Bll5240 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89JP3_BRAJA
          Length = 202

 Score = 43.3 bits (100), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 19/162 (11%)

Query: 4   NKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLR 63
              Q A     S     ++  +G+   +  GK     YD   V +               
Sbjct: 25  TIAQAAAHICCSRSQFDSYLAEGVITRQPSGK-----YDLDQVRREVLAHLRS------- 72

Query: 64  REVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAG 123
                 + A         +  ER RL  A+   +E ++A ++ ++V+       L +   
Sbjct: 73  ------VAAGRGGAAGSRLTEERTRLVAAKRRREERQDAFEAGQLVQLESVCRCLEQSLV 126

Query: 124 EIASILDGIPLSVQRRFPELENRH-VDFLKRDIIKAMNKAAA 164
            + + L  +P                  +   +  A+ + A 
Sbjct: 127 GMRNRLLNLPGETAYLLAMRRQEECFKVVDDAVRAALEEIAD 168


>UniRef50_B3H0X8 Putative uncharacterized protein n=4 Tax=Pasteurellaceae
           RepID=B3H0X8_ACTP7
          Length = 159

 Score = 42.9 bits (99), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 1/91 (1%)

Query: 73  SETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGI 132
           SE             R    QA+ + LK    + E++  +     +  +A  +   L+ +
Sbjct: 56  SEKMSADVDSLSPNDRRAFWQAENERLKYEEKTGELIPASEVALEMGAMAKAVVQTLETL 115

Query: 133 PLSVQRRFPELENRHVDFLKRDIIKAMNKAA 163
           P  ++R    L+ + +  +++ I    ++ A
Sbjct: 116 PDILERDCG-LQPKDLIRVQQVIDDVRDQMA 145


>UniRef50_Q48KF6 Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv.
           phaseolicola 1448A RepID=Q48KF6_PSE14
          Length = 219

 Score = 42.9 bits (99), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 55/175 (31%), Gaps = 14/175 (8%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWY-------AERDA 55
           +++   A   G S + +    + G  +    G     L D  A  ++            +
Sbjct: 9   LSRTAYAKSKGWSRQYVGKLAQNGRLIETADG-----LVDVDATEQFLGITSDPSRRPAS 63

Query: 56  EIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCT 115
                     V E +   E+       +  + RL  AQA   E      +  +VE A   
Sbjct: 64  TSAQPSPISHVIEPVNPPESPSMVVGYQQSKARLALAQARLAETTLLEANKSLVEVAVVD 123

Query: 116 FVLSRIAGEIASILDGIPLSVQRRFPEL-ENRHVDF-LKRDIIKAMNKAAALDEL 168
                    +  ++  +P  +      + +   ++  L   + + ++ AA++   
Sbjct: 124 AAAFAAGRMLRDLILSLPTQIAPELSGMSDPWEIEKYLVASLRRVLDDAASMTSK 178


>UniRef50_Q31QA7 Putative uncharacterized protein n=2 Tax=Synechococcus elongatus
           RepID=Q31QA7_SYNE7
          Length = 179

 Score = 42.9 bits (99), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 57/178 (32%), Gaps = 13/178 (7%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
            V+ +  A +   S + +    + G         G     D A   + +++      N  
Sbjct: 4   RVSARAYARMRNVSHKGVLEAIQSGRLPSAV-KVGQRWEIDPAQADREWSQN----TNVN 58

Query: 62  LRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRI 121
             +     + A   D     +   +       A   +L     + ++V            
Sbjct: 59  HHKSKAPRVVAEPEDSSLPGLNESKAEREYYLAKLAQLDYEERAGQLVSAEDVRVTWFSH 118

Query: 122 AGEIASILDGIPLS----VQRRFPELENRHVDFL----KRDIIKAMNKAAALDELIPG 171
           A  +   +  +P+     V+    EL+      +    +R++++A+ + A  +EL P 
Sbjct: 119 ARRVRDAILNVPIRIVDEVRAIAGELDENQRHEILLCLQRELVQALEELAGPEELPPQ 176


>UniRef50_A0NRU5 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM
           12614 RepID=A0NRU5_9RHOB
          Length = 163

 Score = 42.5 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 5/112 (4%)

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
              V  +LQ +    +   +   + R   A+A   EL  A+   E++           + 
Sbjct: 49  AMSVRSILQHARKSREDSELSKAKAREINARARRHELSMAKAERELIPLEDFEVAFDEVL 108

Query: 123 GEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLS 174
             + S   G+P  + R     +         ++  +M + AA  +    +L 
Sbjct: 109 AAMRSEFVGLPARLTR-----DRTERTRFNGEVHASMARIAAKLKDRADMLR 155


>UniRef50_B2UKQ5 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila
           ATCC BAA-835 RepID=B2UKQ5_AKKM8
          Length = 167

 Score = 42.5 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 17/158 (10%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +++ +LA   G +  TI    ++G+               + A I+   E   +      
Sbjct: 4   ISQAELARQLGVNKSTITYHVKRGL---------------THAQIRELIEARRKENPIAE 48

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTR--AQADAQELKNARDSAEVVETAFCTFVLSR 120
               E    A E  +           +T    QA+   +K  +D A +V+      ++  
Sbjct: 49  PASPEIGKNAPEEGVAELRKRKLAAEITYKNLQAEQARVKLEKDKARLVDMEDVNELVVH 108

Query: 121 IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKA 158
           +A     +L      +  +   L    +  + R+ IKA
Sbjct: 109 LASITKGVLQAFENKLPGKMEGLTAAEMVPMLREEIKA 146


>UniRef50_C1CPH0 Transcriptional regulator, AlpA family n=4 Tax=Streptococcus
          RepID=C1CPH0_STRZT
          Length = 89

 Score = 42.5 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 2  EVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD 54
           +NK Q     G S  T+  W ++G+PV++    G  V ++   + KW   + 
Sbjct: 38 YLNKGQTCKYLGISNNTLDGWIQKGLPVIK---IGKTVRFNKNEIDKWLCRKA 87


>UniRef50_Q830E1 Conserved domain protein n=7 Tax=Enterococcus faecalis
          RepID=Q830E1_ENTFA
          Length = 89

 Score = 42.1 bits (97), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDA 55
          +N+ ++A  F  S  TI+ W++ G+P      +G    YD     +W   +  
Sbjct: 39 LNQTEIAKYFNVSTTTIREWEKLGLPHGSVSKQGK--FYDKEGCRRWLLSQKR 89


>UniRef50_Q2W853 Putative uncharacterized protein n=5 Tax=Proteobacteria
           RepID=Q2W853_MAGSA
          Length = 211

 Score = 42.1 bits (97), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M ++ ++ A   G S   ++   + G       G  + V  D+A   +    R A    +
Sbjct: 31  MGLSVREYARRRGVSHTAVRKAVQTGRIPQEPDGTIDPVKADAAWDAQTDPGRKATTAPK 90

Query: 61  KLRREVEELLQASETDLQPG-------TIEYERHRLTRAQADAQELKNARDSAEVVETAF 113
            +           + +  P        T    R     A+A    ++  R   EVV+ A 
Sbjct: 91  PVIEAPIAPAPKPQRETTPAVPAAAGATFAQARTAHEVAKAQKARIQVDRLKDEVVDRAR 150

Query: 114 CTFVLSRIAGEIASILDGIPLSVQRRFPE---LENRHVDF-LKRDIIKAMNKAAALDEL 168
            T ++ ++A +        P  V  +      ++   +   L+  +   +++ AA++  
Sbjct: 151 ATALVFKLARQERDAWITWPARVAGQMAAEIGIDPHVMQTLLEAHVHAHLDELAAIEPN 209


>UniRef50_D1AA53 N-6 DNA methylase n=1 Tax=Thermomonospora curvata DSM 43183
           RepID=D1AA53_THECD
          Length = 698

 Score = 42.1 bits (97), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 3/99 (3%)

Query: 2   EVNKKQLADIFGASIRTIQNWQEQGM-PVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           +V   +++ I G +  T+ NW+ +        GG     LYD  AV  W   R       
Sbjct: 7   QVTAAEISRIAGVTRATVSNWRRRHADFPAPVGGTEASPLYDLDAVRAWLKARGHASAAN 66

Query: 61  KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQEL 99
            +      L        +   +     RL  A  D  EL
Sbjct: 67  PIEELRTTLRAHGGDTARLLPLVLAAARL--ADGDLTEL 103


>UniRef50_Q53574 Putative uncharacterized protein orf G n=1 Tax=Synechococcus
           elongatus PCC 7942 RepID=Q53574_SYNE7
          Length = 171

 Score = 41.7 bits (96), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 44/165 (26%), Gaps = 14/165 (8%)

Query: 7   QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66
           + A   G + + I      G  +      G+    D  A  + +A               
Sbjct: 9   EFARANGVAPQAIHQAIAAGR-ITSVWKVGSRWHVDPVAAAREWAANTDPSRIRNDGGGR 67

Query: 67  EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126
            +  +              R      +A+   L        +V+        +  +  + 
Sbjct: 68  GKRREP-----PSAEQLEARRLKAHYRAELLRLDVEERERSLVDAEDIASTWAAESKRVI 122

Query: 127 SILDGIPLSVQRRF----PELENRHVDFL----KRDIIKAMNKAA 163
                +P +  R       EL     + +    +RD+ +A+   +
Sbjct: 123 DRFATVPAACVRSIEAVTGELPPEKREAIAALLQRDVSQALEPLS 167


>UniRef50_Q72FM0 Putative uncharacterized protein n=3 Tax=Desulfovibrio vulgaris
           RepID=Q72FM0_DESVH
          Length = 243

 Score = 41.4 bits (95), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 50  YAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVV 109
           Y +RD +     L        + +E                  QA A+  KN   + + +
Sbjct: 100 YRKRDVDRYAASLPTHALPEKETAEAQEYASRKAKAEAEKLEEQAKAERFKNEVRAGKYI 159

Query: 110 ETAFCTFVLSRIAGEIASILDGIPLSVQRRF-------PELENRHVDFLKRDIIKAMNKA 162
                   L+  AG +A+ L  +  +            P+     + F +R +  A+N+ 
Sbjct: 160 LRDDVEVELAARAGVLATGLRTMFETSLLDLIHTAEGNPKKAPDLLSFFERQLDAALNEY 219

Query: 163 AA 164
           A 
Sbjct: 220 AR 221


>UniRef50_C8NRQ9 Putative uncharacterized protein n=2 Tax=Corynebacterium
          efficiens RepID=C8NRQ9_COREF
          Length = 604

 Score = 41.4 bits (95), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 2/88 (2%)

Query: 2  EVNKKQLADIFGASIRTIQNWQEQ--GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIEN 59
          ++   ++A + G S   +  W+++          GKG  +L++   V+ W  +    I  
Sbjct: 7  KITTSEIAQLAGVSTAAVSQWRKRHPDTFPQALPGKGRAILFNRIDVLNWLKDNGRPIRE 66

Query: 60 EKLRREVEELLQASETDLQPGTIEYERH 87
               +       +            R 
Sbjct: 67 VWSMADSIRGFVEASKYGPTLAFFAARA 94


>UniRef50_Q72A11 Putative uncharacterized protein n=2 Tax=Desulfovibrio vulgaris
           RepID=Q72A11_DESVH
          Length = 337

 Score = 41.0 bits (94), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 52/159 (32%), Gaps = 16/159 (10%)

Query: 14  ASIRTIQNWQ--EQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQ 71
            S RT  N+    +     R G    + +   A    W       +    + +  E    
Sbjct: 40  ISRRTFYNYVGTRRDCRPRRDGLYHADDIVKIATAAGW----PPRVSAGAVPQGGEGGAT 95

Query: 72  ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDG 131
           A +  L   T+  +R R  R + D +EL+  +   E+V       ++S     + S L  
Sbjct: 96  AKDVGL---TLLEQRLRRERIRGDLEELELRKKRGELVSRGEMERMMSAGVAVLESELLN 152

Query: 132 IPLSVQRRF-------PELENRHVDFLKRDIIKAMNKAA 163
              S            P+ E   +D L+      +N  A
Sbjct: 153 WIHSEALEIISLVDGNPKHEALLIDMLRERSRVFLNGFA 191


>UniRef50_A3LLS2 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa
           2192 RepID=A3LLS2_PSEAE
          Length = 191

 Score = 40.6 bits (93), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 54/179 (30%), Gaps = 22/179 (12%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           + + + A   G S   +   + QG  VL  GGK      D  A  +  AE     +    
Sbjct: 4   LTQSEFAARRGWSRAYVSKLKSQGRLVLGEGGK-----IDVEATEQQLAESSDPSKAGVA 58

Query: 63  RREVEELLQ---------------ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAE 107
            R   +                   + +       +  R       A   E +  +   E
Sbjct: 59  ERHQRDRADKGVHAHVTPTATASLPAPSGGGSLNFQKARAHREHYLALLAEDEFRKGRGE 118

Query: 108 VVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAA 164
           +VE          +A  +  +L G+P  V      + +       L   I  A+ +AA+
Sbjct: 119 LVEREVVDCAAFDVARSLRDLLMGLPTKVAGELVAITDPWEMEQRLTSLIRVALEEAAS 177


>UniRef50_C7Q3S9 Transcriptional regulator, MerR family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7Q3S9_CATAD
          Length = 249

 Score = 40.6 bits (93), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 9/163 (5%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +   QLAD  G ++R ++++ ++G+             YD+ AVI          E    
Sbjct: 2   LTISQLADYVGVTVRAVRHYHQRGLLPEPDRDHSGYRRYDAQAVID-LIRIKTLAEAGVP 60

Query: 63  RREVEELLQASETDLQPGTIEYER------HRLTRAQADAQELKNARDSAEVVETAFCTF 116
              +EELL A          E +R        L   +    +L +        E A    
Sbjct: 61  LARIEELLAADAEQFTDAVAEIDRSMQDQIRELKERRRRVAQLASGERLFLPTEIAEYIE 120

Query: 117 VLSRIAGEIASILDGIPL--SVQRRFPELENRHVDFLKRDIIK 157
            L  +      +L        +   +PEL  R +   + D+  
Sbjct: 121 ELRAVGVSDRGVLMERDGWVILAAAYPELAPRWIAHKRADLAD 163


>UniRef50_B4CXQ2 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus
           Ellin428 RepID=B4CXQ2_9BACT
          Length = 197

 Score = 40.6 bits (93), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 53/156 (33%), Gaps = 25/156 (16%)

Query: 7   QLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREV 66
           +LA+    + +TI  W++            +  L+D A   ++  +R  +   E    + 
Sbjct: 58  ELAETLKVTRQTINGWKK----FEDAPKPESNGLHDVAKWKEFMRQRGLKGGEETPDIQQ 113

Query: 67  EELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIA 126
                              R R   A+ + +EL+ A    E +         + + G+  
Sbjct: 114 AL-----------------RARKLLAEVEERELRLAVKRGEFISVEQVRGDWTNLVGQAT 156

Query: 127 SILDGIPLSVQRRFPE-LENRHVDFLKRDIIKAMNK 161
           ++L       +   P  L       ++ +  KA+++
Sbjct: 157 ALLRR---KFENELPPILSGLDATGIQEECRKAIDE 189


>UniRef50_Q87B59 Phage-related protein n=7 Tax=Xylella fastidiosa RepID=Q87B59_XYLFT
          Length = 196

 Score = 40.6 bits (93), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/169 (10%), Positives = 51/169 (30%), Gaps = 4/169 (2%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +   + A   G S   I+  + +G  +L   G+ +    D+   +          +    
Sbjct: 1   MTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTL--LDGMTHPVQGGKRGMT 58

Query: 63  RREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIA 122
                 +   +    Q   ++    R   A+A   EL   + + ++         +  + 
Sbjct: 59  DPHAAAVPTFTVMTPQGIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLV 118

Query: 123 GEIASILDGIPLSVQRRFPELEN--RHVDFLKRDIIKAMNKAAALDELI 169
            +  + L G+   +++      +  +    +  D+     +       +
Sbjct: 119 RQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQDAATTL 167


>UniRef50_C5B657 Putative uncharacterized protein n=1 Tax=Methylobacterium
          extorquens AM1 RepID=C5B657_METEA
          Length = 105

 Score = 40.6 bits (93), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 4  NKKQLADIFGASIRTIQNWQEQGMPVL-RGGGKGNEVLYDSAAVIKWYAER 53
          +  ++AD+ G S  T+  W   GMP        G   L D    ++W   R
Sbjct: 36 SASKVADLLGVSRATVAKWIRDGMPTEGSEPAPGKPYLIDIGIAVRWLQGR 86


>UniRef50_C6BW00 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens
           DSM 2638 RepID=C6BW00_DESAD
          Length = 185

 Score = 40.6 bits (93), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 57/163 (34%), Gaps = 18/163 (11%)

Query: 14  ASIRTIQNWQEQG--MPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQ 71
            S RT  N+  +G  +P L     G     D   V +           E  + + E L  
Sbjct: 23  ISRRTFFNYVGKGKQVPPL----NGKYYEDDICEVAEQLGWVPIGQVAEADQPDDEGL-- 76

Query: 72  ASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDG 131
              T       +  + +    +A+ + LK  ++  ++++      +++     + + L  
Sbjct: 77  ---TGDSAKRFQEAKAKDKEFEAELKRLKLNKELGKLIDRENVEMIMAGKTAVLDTGLRQ 133

Query: 132 IPLSVQRRF-------PELENRHVDFLKRDIIKAMNKAAALDE 167
           + +   R F        E E+  +  +  ++    ++ A  DE
Sbjct: 134 LFIMKARDFIFAVDGKVEREDAFIQMVNDELDALFSEFARTDE 176


>UniRef50_Q1IL58 Putative prophage repressor n=1 Tax=Candidatus Koribacter
           versatilis Ellin345 RepID=Q1IL58_ACIBL
          Length = 247

 Score = 40.2 bits (92), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 23/196 (11%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           +++N+ Q AD  G +  ++  W+++G             +Y            +      
Sbjct: 15  LKMNQSQFADALGVTQASVSRWEQKGASTRGPSRGAWTSMYFLG--FDTPLANELYERAG 72

Query: 61  KLRREVEELLQASETDLQPGTIEYERH-------------RLTRAQADAQELKNARDSAE 107
                V+ L +    DL      Y R                 +A A    L N +D  +
Sbjct: 73  LDPEAVKRLARDFRDDLSGRETTYVRENGDGPVEGVAIPLLTDKAAAGQPRLINEKDIQK 132

Query: 108 VV--ETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAAL 165
            +           S     +         S+     +     VD  +RD  K +    A+
Sbjct: 133 YLLFPREMVPHPTSTRCMRVRG------DSMAPIVDDGYIVAVDTSERDPRKLVESMVAV 186

Query: 166 DELIPGLLSEYIEQSG 181
            +   G   +++ Q+G
Sbjct: 187 SDPESGCTIKWLRQAG 202


>UniRef50_C4S5Y0 DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) n=3
           Tax=Enterobacteriaceae RepID=C4S5Y0_YERBE
          Length = 203

 Score = 40.2 bits (92), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 53/193 (27%), Gaps = 32/193 (16%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKL 62
           +N+   A +   S +T+  W+ +G  VL G     E    +    +    R  +      
Sbjct: 1   MNQSDFAKLHNVSRKTVTAWKARGWLVLAGDDIDVEASNANIERFRKTVTRPEKKVAGNT 60

Query: 63  RR-------------------------EVEELLQASETDLQPGTIEYERHRLTRAQ--AD 95
           +                          +    +           +  +  R  +    A 
Sbjct: 61  QGNKAGNKTGNRAKGNRSGNRPDKDPVDSPADVVKKMIAESGVEMTIDEAREMKENFLAL 120

Query: 96  AQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL-----ENRHVDF 150
              L+    S +V+        +      + + L  I      R   L     +   V+ 
Sbjct: 121 LTRLEYDIKSGQVLPYKEMIEAVGSEYSRMRTRLIAIAPEHGPRLRVLASTTNDAEFVEA 180

Query: 151 LKRDIIKAMNKAA 163
           L+  + +AM + +
Sbjct: 181 LQEVVYEAMEELS 193


>UniRef50_Q6VY86 Putative uncharacterized protein n=1 Tax=Streptomyces phage VWB
          RepID=Q6VY86_9CAUD
          Length = 77

 Score = 39.8 bits (91), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYA 51
          +   QL   +G S  T+  W ++G PV     +G    +D   V  W +
Sbjct: 22 LTTAQLMARYGVSNWTVNKWVQEGCPVEPTAFRGR--RFDPDRVAAWMS 68


>UniRef50_A0L9B4 Putative uncharacterized protein n=5 Tax=Proteobacteria
           RepID=A0L9B4_MAGSM
          Length = 187

 Score = 39.4 bits (90), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 22/184 (11%)

Query: 1   MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE 60
           M V+ +Q A + G S   ++   + G       G  +    D+A        +  EI   
Sbjct: 1   MGVSIRQYAKLRGVSDAAVRKAIKAGRISKEPDGTVDPAKADAAWERNTNPAQQREISAN 60

Query: 61  KLRREVEELLQASETDLQP--------------------GTIEYERHRLTRAQADAQELK 100
                                                     +  R       A   +L 
Sbjct: 61  GGANPSANQAANPGYAPPANQPQRFASQTPPSPPLKQGAPDYQTSRAIREAYSARLVKLD 120

Query: 101 NARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHV--DFLKRDIIKA 158
               S ++V +         +A  +   L  IP  +        +  V  + L +++ KA
Sbjct: 121 FEERSEQLVSSDEVKVSAFNLARRVRDRLFTIPHRLSSVLASENDAGVIEERLDQELRKA 180

Query: 159 MNKA 162
           + + 
Sbjct: 181 LEEL 184


>UniRef50_Q398F6 Putative uncharacterized protein n=1 Tax=Burkholderia sp. 383
           RepID=Q398F6_BURS3
          Length = 196

 Score = 39.4 bits (90), Expect = 0.056,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 27/195 (13%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPV-------------------------LRGGGKGN 37
           +N+ + A +   S +T+  W+E+G  V                         +    +GN
Sbjct: 1   MNQSEFAVLHRVSRKTVTKWKERGWLVFAGDEVDVDSSNALLKRYRRDGIQSVTQPEEGN 60

Query: 38  EVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQ 97
                +    K    R++E+             +          ++  +       A   
Sbjct: 61  TKGNKANLTPKRVTSRNSEVTIRDGETAATAAERVLVATGAEMNVDEAKRVKENYLALQA 120

Query: 98  ELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPEL--ENRHVDFLKRDI 155
           +L+  RD+  VV  +     +     ++ S L  IP     R   L       D L+  I
Sbjct: 121 QLEYDRDAGLVVAVSDVAKAVGDEYAKVRSRLLAIPAEHAPRIQRLKSAVEVQDALQEII 180

Query: 156 IKAMNKAAALDELIP 170
            +A+ +        P
Sbjct: 181 TEALEELTRDGVDRP 195


>UniRef50_UPI0000383339 COG4220: Phage DNA packaging protein, Nu1 subunit of terminase n=1
           Tax=Magnetospirillum magnetotacticum MS-1
           RepID=UPI0000383339
          Length = 110

 Score = 39.0 bits (89), Expect = 0.074,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 1/83 (1%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQ-GMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEK 61
           V+  +LA + G    TI +W ++ G+PV+RGG  G E   D  A + W   +      + 
Sbjct: 27  VSITELAALTGYHRDTISDWVKRWGLPVVRGGAHGIEYQIDVRAFVDWPEAQAKAEALKN 86

Query: 62  LRREVEELLQASETDLQPGTIEY 84
                            P     
Sbjct: 87  APAAASGGFAGWLGITDPAKAAQ 109


>UniRef50_B2UKR7 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila
          ATCC BAA-835 RepID=B2UKR7_AKKM8
          Length = 70

 Score = 38.7 bits (88), Expect = 0.089,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 5/62 (8%)

Query: 3  VNKKQLADIFGASIRTIQNWQEQGMPV-----LRGGGKGNEVLYDSAAVIKWYAERDAEI 57
          +   +LA        T+  W   GMP      +    +G    YD   V  W  ER  + 
Sbjct: 7  LTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKR 66

Query: 58 EN 59
           +
Sbjct: 67 TS 68


>UniRef50_C7VU90 Predicted protein n=3 Tax=Enterococcus RepID=C7VU90_ENTFA
          Length = 104

 Score = 38.7 bits (88), Expect = 0.095,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 3   VNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERD 54
           +N+ ++A     S+ TI+ ++  GMP  + G +     YD     +W   + 
Sbjct: 54  LNQTEIAKYLNVSVPTIRQYEMLGMPFGQAGTQSKS--YDKEECRRWLLSQK 103


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.309    0.121    0.270 

Lambda     K      H
   0.267   0.0365    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 660,932,619
Number of Sequences: 3077464
Number of extensions: 18267189
Number of successful extensions: 130513
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 154
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 129857
Number of HSP's gapped (non-prelim): 720
length of query: 181
length of database: 1,040,396,356
effective HSP length: 121
effective length of query: 60
effective length of database: 668,023,212
effective search space: 40081392720
effective search space used: 40081392720
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 88 (38.7 bits)
