Phyre 2 alignment of P31062 with c2h8rA_

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Job Description | P31062
Confidence | 39.46% | Date | Thu Jan 5 11:46:59 GMT 2012
Rank | 388 | Aligned Residues | 26
% Identity | 15% | Template | c2h8rA_
PDB info | PDB header:transcription activator/dna | Chain: A: PDB Molecule:hepatocyte nuclear factor 1-beta; | PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product
Resolution | 3.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | V | N | K | K | Q | L | A | D | I | F | G | A | S | I | R | T | I | Q | N | W | Q | E | Q | G | M | P
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Template Sequence |  | I | P | Q | R | E | V | V | D | V | T | G | L | N | Q | S | H | L | S | Q | H | L | N | K | G | T | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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