18/01/2012 15:52:38 : INFO  : Run start: Wed Jan 18 15:52:38 GMT 2012
18/01/2012 15:52:39 : INFO  : Initialised job
18/01/2012 15:52:39 : INFO  : Renaming log file 'phyre2_20120118_155238.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/fe19f50d71ff2b31/phyre_20120118_155238.log'
18/01/2012 15:52:39 : INFO  : Initialised job:
Sequence
>batch____
MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE
KLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR
IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS
G

18/01/2012 15:52:39 : INFO  : Checked sequence
18/01/2012 15:52:39 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 15:52:39 : INFO  : PSI-BLAST 3 iterations
18/01/2012 15:53:35 : INFO  : PSI-BLAST 5 iterations
18/01/2012 15:54:32 : INFO  : Finished PSI-BLAST
18/01/2012 15:54:32 : INFO  : Running Buildali to generate a3m file
18/01/2012 15:56:47 : INFO  : Converting to HMM
18/01/2012 15:56:47 : INFO  : Calibrating HMM
18/01/2012 15:56:52 : INFO  : Searching HMM database
18/01/2012 16:00:18 : INFO  : Finished buildali
18/01/2012 16:00:18 : INFO  : Predicting secondary structure
18/01/2012 16:00:18 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 16:00:18 : INFO  : Predicting Disordered regions
18/01/2012 16:00:18 : INFO  : Predicted Disorder (Disopred)
18/01/2012 16:00:18 : INFO  : Running memsat_svm check
18/01/2012 16:02:27 : INFO  : Globular protein
18/01/2012 16:02:27 : INFO  : Predicted Transmembrane (memsat_svm) ID 'fe19f50d71ff2b31'
18/01/2012 16:02:27 : INFO  : Initialising fold library search
18/01/2012 16:02:28 : INFO  : Initialised search input
18/01/2012 16:02:28 : INFO  : Building Ensemble models
18/01/2012 16:02:28 : INFO  : Building hh.d1j9ia_.model.1.pdb
18/01/2012 16:02:28 : INFO  : Building hh.c3hh0C_.model.2.pdb
18/01/2012 16:02:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/fe19f50d71ff2b31/hh.c3hh0C_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/fe19f50d71ff2b31/c3hh0C_.2.pdb
18/01/2012 16:02:28 : INFO  : Building hh.d1r8ea1.model.3.pdb
18/01/2012 16:02:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/fe19f50d71ff2b31/hh.d1r8ea1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/fe19f50d71ff2b31/d1r8ea1.9.pdb
18/01/2012 16:02:29 : INFO  : Building d1j9ia_.1.pdb
18/01/2012 16:02:29 : INFO  : Building c3hh0C_.2.pdb
18/01/2012 16:02:29 : INFO  : Building d1r8da_.3.pdb
18/01/2012 16:02:30 : INFO  : Building d1q06a_.4.pdb
18/01/2012 16:02:30 : INFO  : Building c3qaoA_.5.pdb
18/01/2012 16:02:30 : INFO  : Building c2zhhA_.6.pdb
18/01/2012 16:02:30 : INFO  : Building c3gp4B_.7.pdb
18/01/2012 16:02:31 : INFO  : Building c2vz4A_.8.pdb
18/01/2012 16:02:31 : INFO  : Building d1r8ea1.9.pdb
18/01/2012 16:02:31 : INFO  : Building c3bd1B_.10.pdb
18/01/2012 16:02:32 : INFO  : Building c2jmlA_.11.pdb
18/01/2012 16:02:32 : INFO  : Building d2ppxa1.12.pdb
18/01/2012 16:02:32 : INFO  : Building c2ppxA_.13.pdb
18/01/2012 16:02:32 : INFO  : Building c3gpvA_.14.pdb
18/01/2012 16:02:33 : INFO  : Building c2fjrB_.15.pdb
18/01/2012 16:02:33 : INFO  : Building c3fmyA_.16.pdb
18/01/2012 16:02:33 : INFO  : Building c3gn5B_.17.pdb
18/01/2012 16:02:33 : INFO  : Building d1biaa1.18.pdb
18/01/2012 16:02:34 : INFO  : Building c2ebyA_.19.pdb
18/01/2012 16:02:34 : INFO  : Building c2kpjA_.20.pdb
18/01/2012 16:02:36 : INFO  : Finished HH model building
18/01/2012 16:02:36 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 16:02:41 : INFO  : html domain output complete ID 'fe19f50d71ff2b31'
18/01/2012 16:03:55 : INFO  : Run end  : Wed Jan 18 16:03:55 GMT 2012
