Phyre 2 alignment of P31062 with d1qpma_

Return to main results | Retrieve Phyre Job Id

Job Description | P31062
Confidence | 32.39% | Date | Thu Jan 5 11:46:59 GMT 2012
Rank | 412 | Aligned Residues | 41
% Identity | 22% | Template | d1qpma_
SCOP info | Putative DNA-binding domain | Putative DNA-binding domain | Excisionase-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . |  |  | . | . | . | . | . | 20 | . | . | . | . | . |  | . | . | . | . | 30 | . | . | . | . | . |  |  | . | . | . | . | 40 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Query Sequence |  | M | E | V | N | K | K | Q | L | A | D | I | F | G | A | . | . | S | I | R | T | I | Q | N | W | Q | E | Q | . | G | M | P | V | L | R | G | G | G | K | . | . | G | N | E | V | L | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | W | C | S | P | Q | E | I | M | A | A | D | G | M | P | G | S | V | A | G | V | H | Y | R | A | N | V | Q | G | W | T | K | R | K | K | E | G | V | K | G | G | K | A | V | E | Y
Template Known Secondary structure |  |  |  | B |  |  |  |  |  |  | T | S | T | T | S |  | S | S |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S |  | S | S | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions