Phyre 2 alignment of P24203 with c2x8aA_

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Job Description | P24203
Confidence | 94.62% | Date | Thu Jan 5 11:41:12 GMT 2012
Rank | 365 | Aligned Residues | 49
% Identity | 31% | Template | c2x8aA_
PDB info | PDB header:nuclear protein | Chain: A: PDB Molecule:nuclear valosin-containing protein-like; | PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | N | P | I | A | V | T | L | L | T | G | F | L | G | A | G | K | T | T | L | L | R | H | I | L | N | E | Q | H | G | Y | K | I | A | V | I | E | N | E | F | G | E | V | S | V | D | D | Q | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | T | P | A | G | V | L | L | A | G | P | P | G | C | G | K | T | L | L | A | K | A | V | A | N | E | S | G | L | N | F | I | S | V | K | G | P | E | L | L | N | M | Y | V | G | E | S | E
Template Known Secondary structure |  |  |  |  |  | S |  |  |  |  |  | S | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T | T | T |  | S | S | T | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 612 | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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