08/01/2012 22:15:22 : INFO  : Run start: Sun Jan  8 22:15:21 GMT 2012
08/01/2012 22:15:25 : INFO  : Initialised job
08/01/2012 22:15:26 : INFO  : Renaming log file 'phyre2_20120108_221521.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/fdfbaccd160fb744/phyre_20120108_221521.log'
08/01/2012 22:15:27 : INFO  : Initialised job:
Sequence
>batch____
MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTL
TNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQR
YLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGEAEKLHERLARINARA
PVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIADKQNDISSIVVELDYPVDISEV
SRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDEKPHSTMVFI
GIQLPEEEIRAAFAGLRK

08/01/2012 22:15:28 : INFO  : Checked sequence
08/01/2012 22:15:30 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 22:15:30 : INFO  : PSI-BLAST 3 iterations
08/01/2012 22:17:17 : INFO  : PSI-BLAST 5 iterations
08/01/2012 22:19:28 : INFO  : Finished PSI-BLAST
08/01/2012 22:19:30 : INFO  : Running Buildali to generate a3m file
08/01/2012 22:27:50 : INFO  : Converting to HMM
08/01/2012 22:27:55 : INFO  : Calibrating HMM
08/01/2012 22:28:08 : INFO  : Searching HMM database
08/01/2012 22:35:09 : INFO  : Finished buildali
08/01/2012 22:35:10 : INFO  : Predicting secondary structure
08/01/2012 22:35:14 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 22:35:15 : INFO  : Predicting Disordered regions
08/01/2012 22:35:18 : INFO  : Predicted Disorder (Disopred)
08/01/2012 22:35:20 : INFO  : Running memsat_svm check
08/01/2012 22:38:15 : INFO  : Running memsat_svm full
08/01/2012 22:46:15 : INFO  : Predicted Transmembrane (memsat_svm) ID 'fdfbaccd160fb744'
08/01/2012 22:46:17 : INFO  : Initialising fold library search
08/01/2012 22:46:20 : INFO  : Initialised search input
08/01/2012 22:46:22 : INFO  : Building Ensemble models
08/01/2012 22:46:25 : INFO  : Building hh.c1nijA_.model.1.pdb
08/01/2012 22:46:35 : INFO  : Building c1nijA_.1.pdb
08/01/2012 22:46:48 : INFO  : Building d1nija1.2.pdb
08/01/2012 22:46:58 : INFO  : Building d1nija2.3.pdb
08/01/2012 22:47:10 : INFO  : Building c2hf9A_.4.pdb
08/01/2012 22:47:20 : INFO  : Building c2wsmB_.5.pdb
08/01/2012 22:47:30 : INFO  : Building c3nxsA_.6.pdb
08/01/2012 22:47:40 : INFO  : Building c3dm5A_.7.pdb
08/01/2012 22:47:50 : INFO  : Building d2qm8a1.8.pdb
08/01/2012 22:48:00 : INFO  : Building d1yrba1.9.pdb
08/01/2012 22:48:11 : INFO  : Building c3dmdA_.10.pdb
08/01/2012 22:48:21 : INFO  : Building c2iy3A_.11.pdb
08/01/2012 22:48:33 : INFO  : Building c2cnwF_.12.pdb
08/01/2012 22:48:44 : INFO  : Building d1qzxa3.13.pdb
08/01/2012 22:48:53 : INFO  : Building c2yhsA_.14.pdb
08/01/2012 22:49:03 : INFO  : Building c1zu4A_.15.pdb
08/01/2012 22:49:13 : INFO  : Building c2v3cC_.16.pdb
08/01/2012 22:49:22 : INFO  : Building c2j37W_.17.pdb
08/01/2012 22:49:32 : INFO  : Building c2j7pA_.18.pdb
08/01/2012 22:49:43 : INFO  : Building c2f1rA_.19.pdb
08/01/2012 22:49:52 : INFO  : Building c2qy9A_.20.pdb
08/01/2012 22:50:16 : INFO  : Finished HH model building
08/01/2012 22:50:17 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 22:51:00 : INFO  : html domain output complete ID 'fdfbaccd160fb744'
08/01/2012 23:27:23 : INFO  : Run end  : Sun Jan  8 23:27:22 GMT 2012
