 |
| Job Description | Q9JMS8 | | Confidence | 2.95% | Date | Thu Jan 5 12:38:04 GMT 2012 |
| Rank | 55 | Aligned Residues | 26 |
| % Identity | 8% | Template | c3e0dA_ |
| PDB info |
PDB header:transferase/dna | Chain: A: PDB Molecule:dna polymerase iii subunit alpha; |
PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit
|
| Resolution | 4.60 Å |
|
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | D | Q | G | V | Q | Y | K | S | N | K | Y | K | I | L | L | C | R | Y | E | A | M | Q | S | M | S |
| Query Conservation |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
| Template Sequence |   |
T | D | H | G | N | L | F | G | A | V | E | F | Y | K | K | A | T | A | M | G | V | K | P | I | I | G |
| Template Known Secondary structure |   |
 |  |  | T |
|
| T | T |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|