16/01/2012 19:33:34 : INFO  : Run start: Mon Jan 16 19:33:34 GMT 2012
16/01/2012 19:33:34 : INFO  : Initialised job
16/01/2012 19:33:34 : INFO  : Renaming log file 'phyre2_20120116_193334.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/fd5464275072c737/phyre_20120116_193334.log'
16/01/2012 19:33:34 : INFO  : Initialised job:
Sequence
>batch____
MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTN
FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF
LVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN
VPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS
DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANY
LTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAF
MSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPAL
CFAVIFIFARFRSQTATN

16/01/2012 19:33:34 : INFO  : Checked sequence
16/01/2012 19:33:34 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 19:33:34 : INFO  : PSI-BLAST 3 iterations
16/01/2012 19:37:13 : INFO  : PSI-BLAST 5 iterations
16/01/2012 19:45:09 : INFO  : Finished PSI-BLAST
16/01/2012 19:45:09 : INFO  : Running Buildali to generate a3m file
16/01/2012 22:12:40 : INFO  : Converting to HMM
16/01/2012 22:13:36 : INFO  : Calibrating HMM
16/01/2012 22:13:47 : INFO  : Searching HMM database
16/01/2012 22:22:36 : INFO  : Finished buildali
16/01/2012 22:22:36 : INFO  : Predicting secondary structure
16/01/2012 22:22:36 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 22:22:36 : INFO  : Predicting Disordered regions
16/01/2012 22:22:36 : INFO  : Predicted Disorder (Disopred)
16/01/2012 22:22:36 : INFO  : Running memsat_svm check
16/01/2012 22:23:19 : INFO  : Globular protein
16/01/2012 22:23:19 : INFO  : Predicted Transmembrane (memsat_svm) ID 'fd5464275072c737'
16/01/2012 22:23:19 : INFO  : Initialising fold library search
16/01/2012 22:23:19 : INFO  : Initialised search input
16/01/2012 22:23:19 : INFO  : Building Ensemble models
16/01/2012 22:23:19 : INFO  : Building hh.c3o7pA_.model.1.pdb
16/01/2012 22:23:20 : INFO  : Building c3o7pA_.1.pdb
16/01/2012 22:23:20 : INFO  : Building d1pw4a_.2.pdb
16/01/2012 22:23:20 : INFO  : Building c2gfpA_.3.pdb
16/01/2012 22:23:21 : INFO  : Building d1pv7a_.4.pdb
16/01/2012 22:23:21 : INFO  : Building c2xutC_.5.pdb
16/01/2012 22:23:22 : INFO  : Building c3b9yA_.6.pdb
16/01/2012 22:23:22 : INFO  : Building c2g9pA_.7.pdb
16/01/2012 22:23:22 : INFO  : Building c2bbjB_.8.pdb
16/01/2012 22:23:23 : INFO  : Building d3proc1.9.pdb
16/01/2012 22:23:23 : INFO  : Building c3hd6A_.10.pdb
16/01/2012 22:23:24 : INFO  : Building d2iuba2.11.pdb
16/01/2012 22:23:24 : INFO  : Building c3arct_.12.pdb
16/01/2012 22:23:26 : INFO  : Building c3a0bT_.13.pdb
16/01/2012 22:23:26 : INFO  : Building c3emlA_.14.pdb
16/01/2012 22:23:28 : INFO  : Building c3hfxA_.15.pdb
16/01/2012 22:23:29 : INFO  : Building c3a0hT_.16.pdb
16/01/2012 22:23:29 : INFO  : Building d2axtt1.17.pdb
16/01/2012 22:23:31 : INFO  : Building c3kziT_.18.pdb
16/01/2012 22:23:31 : INFO  : Building c3a0ht_.19.pdb
16/01/2012 22:23:32 : INFO  : Building c2axtT_.20.pdb
16/01/2012 22:23:35 : INFO  : Finished HH model building
16/01/2012 22:23:35 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 22:23:39 : INFO  : html domain output complete ID 'fd5464275072c737'
16/01/2012 22:58:41 : INFO  : Run end  : Mon Jan 16 22:58:41 GMT 2012
