220 c2vagA_ Probab=99.55   E-value=1.5e-12  Score=85.03  Aligned_columns=192  Identities=18%

Q ss_pred             HHHHHHHHHCCCCEEEEEEECCCCEEEEEEEE-CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             45556654203320111240277128999998-79975999997224303788986321588998764456787613001
Q batch____        21 YLNVLNDFLSYNINIIKVFRSIDDTKVMLIDT-DYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNT   99 (232)
Q Consensus        21 ~~~i~~~~~~~~~~~~k~l~~~~~~~V~~v~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (232)
                      |.-...+++.++|++.+.+|+|++|.|+++.. ......++++..+  ..........+|....+.+.+......     
T Consensus         3 ~~~~~g~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~--~~~~~~~~~~~Ei~il~~l~h~~~~~~-----   75 (330)
T c2vagA_           3 LICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK--NVDRYCEAARSEIQVLEHLNTTDPNST-----   75 (330)
T ss_dssp             GGCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEC--SSHHHHHHHHHHHHHHHHHHHHCTTCT-----
T ss_pred             EEEECCCEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEC--CCHHHHHHHHHHHHHHHHHCCCCCCCC-----
T ss_conf             4612584867825999998762884899999976798399999983--990568999999999998431222331-----


Q ss_pred             CCCCEEEEEEEEEEECCCEEEEEEECCC---------CCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEE-
Q ss_conf             4664047897877415512666662138---------986401347679999999999999988938677881219997-
Q batch____       100 LNDFYLLAERKTLRFVHTYIMIIEYIDG---------IELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIK-  169 (232)
Q Consensus       100 ~~~~~~v~~~~~~~~~~~~~l~~E~~~g---------~~~~~~~~~~~~~~~~i~~~~~~lh~~~~~h~d~~~~n~~~~-  169 (232)
                         ...+...............++++.+         ...............++..++.++|..+++|+|++|+|++++ 
T Consensus        76 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~  152 (330)
T c2vagA_          76 ---FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQ  152 (330)
T ss_dssp             ---TCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC
T ss_pred             ---CCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
T ss_conf             ---22200001233320000122112367521112221110136565555544555554311012222345541589857


Q ss_pred             CCEEEEEECCCCCCCCCCCCCE-----------------------EEECCCCCCHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             9969999531224365334640-----------------------5741444772577787789787645183116
Q batch____       170 NGEVRIIDLSGKRASAQRKAKD-----------------------RIDLERHYGIKNEIRDLGYYLLVYRKKMRNF  222 (232)
Q Consensus       170 ~~~~~~~d~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~  222 (232)
                      ++..++.|++............                       .......+....|+|++|...+.+.+...++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  228 (330)
T c2vagA_         153 SDYTEAYNKRDERTLINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF  228 (330)
T ss_dssp             CCEEEEECCCEEEEESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCC
T ss_conf             8862000345433444432100014663326754200121023210000011112354210225873100488988