Phyre 2 alignment of P54745 with c2rjoA_

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Job Description | P54745
Confidence | 29.21% | Date | Thu Jan 5 12:06:03 GMT 2012
Rank | 109 | Aligned Residues | 56
% Identity | 9% | Template | c2rjoA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; | PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans
Resolution | 2.05 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 192 | . | . | . | . | . | . | . | 200 | . | . |  |  | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |  | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |  | . | . | . | 240 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | P | A | G | I | A | H | T | Y | M | A | . | . | A | E | Y | L | E | K | A | G | R | K | L | G | V | N | V | Y | V | E | . | K | Q | G | A | N | G | I | E | G | R | L | T | A | D | Q | L | . | N | S | A | T | A | C | I | F | A | A | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | F | R | S | L | T | N | P | Y | Y | T | A | F | N | K | G | A | Q | S | F | A | K | S | V | G | L | P | Y | V | P | L | T | T | E | G | S | S | E | K | G | I | A | D | I | R | A | L | L | Q | K | T | G | G | N | L | V | L | N | V | D
Template Known Secondary structure |  |  |  | S |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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