BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (198 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family ... 209 5e-53 UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX 207 2e-52 UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX 202 5e-51 UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Ta... 198 9e-50 UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ... 189 4e-47 UniRef50_A8GFT2 Integrase family protein n=3 Tax=Serratia protea... 189 5e-47 UniRef50_C6NXS4 Fimbriae recombinase n=3 Tax=Gammaproteobacteria... 178 1e-43 UniRef50_C4XNI1 Site-specific recombinase n=1 Tax=Desulfovibrio ... 177 1e-43 UniRef50_A8GJN9 Integrase family protein n=1 Tax=Serratia protea... 161 1e-38 UniRef50_C8SXU7 Type 1 fimbriae regulatory protein FimE n=1 Tax=... 155 7e-37 UniRef50_C5V7S5 Integrase family protein n=3 Tax=Proteobacteria ... 152 5e-36 UniRef50_A0YRP7 Type 1 fimbriae Regulatory protein fimB n=3 Tax=... 152 6e-36 UniRef50_B7KMC0 Integrase family protein n=2 Tax=Cyanothece RepI... 149 5e-35 UniRef50_C6MXI5 Phage integrase n=1 Tax=Legionella drancourtii L... 142 8e-33 UniRef50_A7BWK3 Type 1 fimbriae Regulatory protein fimB n=1 Tax=... 130 3e-29 UniRef50_A8ZP48 Phage integrase family protein n=6 Tax=Cyanobact... 129 4e-29 UniRef50_Q2RMN3 Phage integrase n=1 Tax=Rhodospirillum rubrum AT... 114 2e-24 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 98 1e-19 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 95 2e-18 UniRef50_D0CZ08 FimB n=1 Tax=Citreicella sp. SE45 RepID=D0CZ08_9... 94 3e-18 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 93 4e-18 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 92 1e-17 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 92 1e-17 UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae ... 92 1e-17 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 91 2e-17 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 91 2e-17 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 89 1e-16 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 88 2e-16 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 88 2e-16 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 87 2e-16 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 87 3e-16 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 87 4e-16 UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desu... 87 4e-16 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 87 5e-16 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 86 7e-16 UniRef50_Q1VYR3 Putative site-specific recombinase n=1 Tax=Psych... 86 8e-16 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 86 8e-16 UniRef50_B8DL21 Integrase family protein n=1 Tax=Desulfovibrio v... 86 9e-16 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 86 9e-16 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 85 1e-15 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 85 2e-15 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 85 2e-15 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 85 2e-15 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 85 2e-15 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 84 2e-15 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 84 2e-15 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 84 2e-15 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 84 3e-15 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 84 3e-15 UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfo... 84 3e-15 UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybac... 84 3e-15 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 84 4e-15 UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=unculture... 84 4e-15 UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus... 84 4e-15 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 83 5e-15 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 83 6e-15 UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobac... 83 6e-15 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 83 6e-15 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 83 7e-15 UniRef50_B5ZDR0 Integrase family protein n=2 Tax=Gluconacetobact... 82 7e-15 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 82 9e-15 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 82 1e-14 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 82 1e-14 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 82 1e-14 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 82 1e-14 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 82 1e-14 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 82 1e-14 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 81 2e-14 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 81 2e-14 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 80 3e-14 UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetob... 80 3e-14 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 80 3e-14 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 80 3e-14 UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteri... 80 3e-14 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 80 3e-14 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 80 4e-14 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 80 4e-14 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 80 5e-14 UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga let... 80 5e-14 UniRef50_C7GZ04 Integrase/recombinase XerD n=1 Tax=Eubacterium s... 79 6e-14 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 79 6e-14 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 79 7e-14 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 79 7e-14 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 79 8e-14 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 79 8e-14 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 79 9e-14 UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncu... 79 1e-13 UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Coryneb... 79 1e-13 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 78 1e-13 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 78 1e-13 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 78 1e-13 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 78 1e-13 UniRef50_Q72AD1 Site-specific recombinase, phage integrase famil... 78 1e-13 UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase f... 78 2e-13 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 78 2e-13 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 78 2e-13 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 78 2e-13 UniRef50_B6ZR00 Site-specific recombinase, phage integrase famil... 78 2e-13 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 78 2e-13 UniRef50_Q1MS58 Site-specific recombinase XerC n=1 Tax=Lawsonia ... 78 2e-13 UniRef50_A4XJF9 Phage integrase family protein n=2 Tax=Caldicell... 78 2e-13 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 78 2e-13 UniRef50_A5FIL1 Phage integrase family protein n=4 Tax=Flavobact... 78 2e-13 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 78 2e-13 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 77 2e-13 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 77 3e-13 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 77 3e-13 UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phy... 77 3e-13 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 77 3e-13 UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ... 77 3e-13 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 77 3e-13 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 77 3e-13 UniRef50_C7PZV6 Integrase family protein n=1 Tax=Catenulispora a... 77 4e-13 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 77 4e-13 UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella kore... 77 4e-13 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 77 4e-13 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 77 4e-13 UniRef50_B6IPE2 Tyrosine recombinase xerC n=11 Tax=Alphaproteoba... 77 4e-13 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 77 5e-13 UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia Rep... 77 5e-13 UniRef50_C8NZN0 Integrase/recombinase XerD n=1 Tax=Erysipelothri... 77 5e-13 UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia g... 76 5e-13 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 76 5e-13 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 76 5e-13 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 76 5e-13 UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychr... 76 5e-13 UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter ... 76 6e-13 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 76 6e-13 UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related... 76 6e-13 UniRef50_B2A5E4 Integrase family protein n=1 Tax=Natranaerobius ... 76 6e-13 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 76 6e-13 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 76 7e-13 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 76 7e-13 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 76 8e-13 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 75 8e-13 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 75 9e-13 UniRef50_B9L0I5 Tyrosine recombinase xerD n=2 Tax=Thermomicrobia... 75 9e-13 UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured mar... 75 9e-13 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 75 9e-13 UniRef50_B1HMD1 Putative uncharacterized protein n=1 Tax=Lysinib... 75 1e-12 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 75 1e-12 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 75 1e-12 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 75 1e-12 UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 75 1e-12 UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium ... 75 1e-12 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 75 1e-12 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 75 1e-12 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 75 1e-12 UniRef50_B5JZ18 Phage integrase n=14 Tax=Rhodobacteraceae RepID=... 75 1e-12 UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betapr... 75 1e-12 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 75 1e-12 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 75 2e-12 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 75 2e-12 UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulos... 75 2e-12 UniRef50_Q2JAI1 Phage integrase n=2 Tax=Actinomycetales RepID=Q2... 74 2e-12 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 74 2e-12 UniRef50_Q5LEL4 Putative tyrosine recombinase n=2 Tax=Bacteroide... 74 2e-12 UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium Re... 74 2e-12 UniRef50_Q30R56 Tyrosine recombinase XerD subunit n=5 Tax=Epsilo... 74 2e-12 UniRef50_C3Q7K5 Tyrosine type site-specific recombinase n=7 Tax=... 74 2e-12 UniRef50_C0GUW3 Integrase family protein n=1 Tax=Desulfonatronos... 74 2e-12 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 74 2e-12 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 74 3e-12 UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithio... 74 3e-12 UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteria... 74 3e-12 UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinom... 74 3e-12 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 74 3e-12 UniRef50_B0MSP3 Putative uncharacterized protein n=1 Tax=Alistip... 74 3e-12 UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochlori... 74 3e-12 UniRef50_Q023B8 Phage integrase family protein n=8 Tax=Bacteria ... 74 4e-12 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 74 4e-12 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 74 4e-12 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 74 4e-12 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 74 4e-12 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 74 4e-12 UniRef50_B2A8Q1 Integrase family protein n=2 Tax=Firmicutes RepI... 73 4e-12 UniRef50_C9M9N6 Tyrosine recombinase XerD n=1 Tax=Jonquetella an... 73 4e-12 UniRef50_A5N3B5 Conserved protein n=3 Tax=Clostridiales RepID=A5... 73 5e-12 UniRef50_A3M0R9 Site-specific tyrosine recombinase n=1 Tax=Acine... 73 5e-12 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 73 5e-12 UniRef50_B7KE90 Integrase family protein n=3 Tax=Cyanothece sp. ... 73 6e-12 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 73 6e-12 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 73 6e-12 UniRef50_D0Y3M6 Integrase family protein n=1 Tax=Caulobacter seg... 73 6e-12 UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillu... 73 7e-12 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 73 7e-12 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 73 7e-12 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 72 7e-12 UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteo... 72 7e-12 UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomi... 72 8e-12 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 72 8e-12 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 72 8e-12 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 72 8e-12 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 72 9e-12 UniRef50_Q2B588 DNA integration/recombination/invertion protein ... 72 1e-11 UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepI... 72 1e-11 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 72 1e-11 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 72 1e-11 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 72 1e-11 UniRef50_C7R3C1 Integrase family protein n=1 Tax=Jonesia denitri... 72 1e-11 UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atop... 72 1e-11 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 72 1e-11 UniRef50_Q9A437 Tyrosine recombinase xerD n=11 Tax=Alphaproteoba... 72 1e-11 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 72 1e-11 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 72 1e-11 UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacter... 72 1e-11 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 72 1e-11 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 72 1e-11 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 72 1e-11 UniRef50_C5BWU3 Integrase family protein n=11 Tax=Actinomycetale... 72 1e-11 UniRef50_Q6MKT3 Integrase/recombinase XerD n=1 Tax=Bdellovibrio ... 72 1e-11 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 71 2e-11 UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2... 71 2e-11 UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales R... 71 2e-11 UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatu... 71 2e-11 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 71 2e-11 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 71 2e-11 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 71 2e-11 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 71 2e-11 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 71 2e-11 UniRef50_A3IZP4 Tyrosine recombinase xerC n=1 Tax=Cyanothece sp.... 71 2e-11 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 71 2e-11 UniRef50_A6M1R6 Phage integrase family protein n=11 Tax=Clostrid... 70 3e-11 UniRef50_A6G048 Site-specific recombinase, phage integrase famil... 70 3e-11 UniRef50_B2JBK3 Phage integrase family protein n=1 Tax=Nostoc pu... 70 3e-11 UniRef50_C8N6J9 Tyrosine recombinase XerC n=1 Tax=Cardiobacteriu... 70 3e-11 UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyc... 70 3e-11 UniRef50_Q2NB52 Tyrosine recombinase xerC n=5 Tax=Sphingomonadal... 70 3e-11 UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria... 70 3e-11 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 70 4e-11 UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella fe... 70 4e-11 UniRef50_C7NGY7 Site-specific recombinase XerD n=1 Tax=Kytococcu... 70 4e-11 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 70 4e-11 UniRef50_A4J2M3 Phage integrase family protein n=1 Tax=Desulfoto... 70 5e-11 UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax... 70 5e-11 UniRef50_Q31NY4 Phage_integrase-like n=3 Tax=Synechococcus elong... 70 5e-11 UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax... 70 5e-11 UniRef50_B1XQW1 Integrase/recombinase n=1 Tax=Synechococcus sp. ... 70 5e-11 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 70 6e-11 UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium... 69 6e-11 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 69 7e-11 UniRef50_B5Z5W0 Integrase/recombinase n=2 Tax=Bacillus cereus gr... 69 7e-11 UniRef50_Q8RAB1 Tyrosine recombinase xerD-like protein n=10 Tax=... 69 7e-11 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 69 7e-11 UniRef50_C1EZT7 Integrase family protein n=1 Tax=Bacillus cereus... 69 7e-11 UniRef50_A1JV48 Recombinase/integrase n=9 Tax=Enterococcus RepID... 69 7e-11 UniRef50_UPI0001C36B4B phage integrase n=1 Tax=Clostridium hathe... 69 7e-11 UniRef50_B5Y6L6 Tyrosine recombinase XerD n=1 Tax=Coprothermobac... 69 7e-11 UniRef50_B2GFZ3 Tyrosine recombinase XerC n=5 Tax=Bacteria RepID... 69 7e-11 UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular orga... 69 7e-11 >UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family n=8 Tax=Escherichia coli RepID=B1LMF8_ECOSM Length = 209 Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 101/187 (54%), Positives = 128/187 (68%), Gaps = 2/187 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 M R++LT E+ ++Q+V + +RD C+ILLAY HG+R+SELL L DL+L +I Sbjct: 1 MQNRKFLTHHEINLLLQSVRQKSCSSRDVCMILLAYFHGLRVSELLSLQLSDLELTTEKI 60 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQER--ANWKGADRTDAIFISRRGSRLSRQQAYR 118 I+R+KNGFSTVHPL+ +E A+ W ER N K + +F+SR G LSRQ+ Y Sbjct: 61 YIQRIKNGFSTVHPLQKEEVIAITNWLNERNSLNVKHFNDNPWLFVSRTGKPLSRQRFYN 120 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I+ AG AG + HPHMLRHACGY LA+ G DTRLIQDYLGHRNIRHTV YTASN+ R Sbjct: 121 IVSAAGKNAGLNIKVHPHMLRHACGYSLADNGVDTRLIQDYLGHRNIRHTVIYTASNSMR 180 Query: 179 FAGLWER 185 F +W R Sbjct: 181 FEKMWGR 187 >UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX Length = 199 Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 96/186 (51%), Positives = 126/186 (67%), Gaps = 1/186 (0%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 KR+YL+ KEV +++A RDYC+I +A+ HG+R+SEL++L D D ++NI Sbjct: 2 KRKYLSEKEVHCLLKAAAENQYSVRDYCMISMAFIHGLRVSELVNLKVDDYDSLSAQLNI 61 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 +RLKNGF T+ PL DE E ++ W ER W G + +F+S+ G LSRQ+ ++++R Sbjct: 62 KRLKNGFCTIQPLLPDENELLQCWLDERKTWDGHESC-WLFLSKNGGPLSRQRFWQLLRK 120 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 G EA + HPHMLRHACG+ LAERG DTRLIQDYLGHRNIRHTV YTASN RF Sbjct: 121 YGDEAHLTIKVHPHMLRHACGFNLAERGNDTRLIQDYLGHRNIRHTVHYTASNPERFRNA 180 Query: 183 WERNNL 188 W +NN Sbjct: 181 WTKNNF 186 >UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX Length = 187 Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 96/182 (52%), Positives = 127/182 (69%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 R+YLT EV +M A + R+ CLI++A+ HG R SELLDL D+D + ++NIR Sbjct: 3 RKYLTQDEVYRLMDAAQSMSFPERNRCLIMMAFIHGFRASELLDLRLSDIDASGKQLNIR 62 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 R+KNGFST HPL DE ++ W ++R + D +F+SR+ +SRQ + IIR+A Sbjct: 63 RIKNGFSTTHPLLPDEYNLIKLWLKQRKLIENGVEGDWLFLSRKRRPISRQHFFSIIREA 122 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 G AG + HPHMLRHACG+ LA+ G DTRL+QDYLGHRNI+HTVRYTASNAARF G+W Sbjct: 123 GKRAGLAVKAHPHMLRHACGFALADNGVDTRLLQDYLGHRNIQHTVRYTASNAARFKGVW 182 Query: 184 ER 185 ++ Sbjct: 183 KK 184 >UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Tax=Bacteria RepID=FIMB_ECO57 Length = 200 Score = 198 bits (503), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 96/183 (52%), Positives = 125/183 (68%), Gaps = 1/183 (0%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 KR +LT E++++++A G AR+YCL LL + HG R SE+ L D+DL I I Sbjct: 9 KRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYI 68 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 RLK GFST HPL E +A++ W R ++ A+ ++ +F+SR+G+ LSRQQ Y II Sbjct: 69 HRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAE-SEWVFLSRKGNPLSRQQFYHIIST 127 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +G AG + HPHMLRH+CG+ LA G DTRLIQDYLGHRNIRHTV YTASNA RF G+ Sbjct: 128 SGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGI 187 Query: 183 WER 185 W+R Sbjct: 188 WDR 190 >UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ8_PROMH Length = 188 Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 90/187 (48%), Positives = 123/187 (65%), Gaps = 1/187 (0%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 M +R++LT EV A+++ G RDYC+ L+ + HG R+SEL +L D+DL + Sbjct: 1 MKQRKFLTRFEVNAILKQAKEGRYPERDYCMFLMCFLHGFRVSELCNLTLSDIDLESRIL 60 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +RRLK G ST P+ +E EA+ W + R NW+ +D ++ +F+S++ +SRQQ Y ++ Sbjct: 61 YVRRLKGGLSTTQPIIDEEYEALCNWLKSRENWRESD-SEWVFLSQKTGPISRQQVYGLL 119 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 R G +A HPHMLRHACGY LA+ G DTRLIQDYLGHRNI HTV YTASN+ RF Sbjct: 120 RRLGKKANVSISPHPHMLRHACGYALADLGRDTRLIQDYLGHRNISHTVIYTASNSKRFI 179 Query: 181 GLWERNN 187 +WE N Sbjct: 180 NMWETRN 186 >UniRef50_A8GFT2 Integrase family protein n=3 Tax=Serratia proteamaculans 568 RepID=A8GFT2_SERP5 Length = 198 Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 90/181 (49%), Positives = 123/181 (67%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 R++LT EV ++Q G RD CLI + + HG R+SEL L DLD+ G + + Sbjct: 8 RKHLTRTEVTRLLQQAAAGRAPERDSCLIWMGFIHGCRVSELNGLRMADLDMESGCVYMN 67 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 RLKNG ST+HPL E+ + RW ++R + + + + +F+S++G RLSRQ+ YR+++ Sbjct: 68 RLKNGLSTIHPLETTEKNLLTRWLEKRRSCRNLEDEEWLFLSQKGYRLSRQRIYRMLQAY 127 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 G +AG HPHMLRHACGY LA+ GADTR+IQDYLGHRNI+HTV YTA+NA RF LW Sbjct: 128 GKQAGLDVDAHPHMLRHACGYALADNGADTRVIQDYLGHRNIQHTVLYTAANAGRFKHLW 187 Query: 184 E 184 + Sbjct: 188 K 188 >UniRef50_C6NXS4 Fimbriae recombinase n=3 Tax=Gammaproteobacteria RepID=C6NXS4_9GAMM Length = 250 Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/193 (48%), Positives = 119/193 (61%), Gaps = 12/193 (6%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S+R++LT E+ ++ A TG RD CLILL YRHG+R++E L +DL + Sbjct: 58 SERKHLTALEIDRLLAATKDNERTGLRDRCLILLMYRHGLRVTEACALQLDQVDLESKVL 117 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANW----------KGADRTDAIFISRRGSR 110 ++ RLK G ST HPLR +E + W ERA W DR A+F+S RG Sbjct: 118 HVTRLKGGLSTSHPLRNEEIRLLRSWLNERARWLRRWQKHDLQTPPDR-QAVFLSVRGQA 176 Query: 111 LSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVR 170 LSR ++++R G AG HPHMLRHACGY LA++G DTRLIQDYLGHRNI+HTVR Sbjct: 177 LSRNTVWQLLRAYGEAAGLSLPPHPHMLRHACGYALADQGTDTRLIQDYLGHRNIQHTVR 236 Query: 171 YTASNAARFAGLW 183 YTA+N RF LW Sbjct: 237 YTATNVRRFDRLW 249 >UniRef50_C4XNI1 Site-specific recombinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNI1_DESMR Length = 183 Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 90/183 (49%), Positives = 116/183 (63%), Gaps = 2/183 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 M +R++L EV ++ A ARD C +LL +RHG+R+SE L +D + Sbjct: 2 MQERKHLVSAEVDKLIAATKGTRNEARDRCFLLLMFRHGLRVSEACGLVLSQVDTESRVL 61 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 ++ RLK G ST PLR DE A++ W +RA K TD+ F+S R + SR+ A+ I Sbjct: 62 HVARLKKGLSTTQPLRADELRAIKAWLTDRAKMK--PDTDSFFVSERRTAWSRKTAWLAI 119 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 R G AG HPHMLRHACG+ LA++GADTRLIQDYLGHRNI+HTVRYTA+N ARF Sbjct: 120 RHYGEVAGLPLPAHPHMLRHACGFALADQGADTRLIQDYLGHRNIQHTVRYTATNPARFE 179 Query: 181 GLW 183 LW Sbjct: 180 KLW 182 >UniRef50_A8GJN9 Integrase family protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GJN9_SERP5 Length = 153 Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 81/152 (53%), Positives = 102/152 (67%), Gaps = 1/152 (0%) Query: 31 LILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQER 90 +I + + HG+R SEL L +++L+ RI I RLKNG S HPL +E + W + R Sbjct: 1 MISMCFIHGLRASELGGLTLDNIELDAKRIYIPRLKNGLSVQHPLHDNEIIMLNHWLEIR 60 Query: 91 ANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERG 150 +W+ AD+ +F+SR+G ++RQQ YR+IRD G A THPHMLRHACGY LA G Sbjct: 61 KSWRYADQP-WLFLSRKGGPITRQQIYRLIRDYGKNANIQVPTHPHMLRHACGYFLANLG 119 Query: 151 ADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 DTRLIQDYLGHRNI HTV YTASNA RF + Sbjct: 120 MDTRLIQDYLGHRNIHHTVLYTASNAMRFQAI 151 >UniRef50_C8SXU7 Type 1 fimbriae regulatory protein FimE n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8SXU7_KLEPR Length = 154 Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 70/87 (80%), Positives = 79/87 (90%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 M++RR+LT KEVQAMMQA G TG RDYCLILLA+RHGMRISELLDLHY DLDL+EGR+ Sbjct: 1 MNRRRFLTAKEVQAMMQAARQGPTGERDYCLILLAFRHGMRISELLDLHYHDLDLHEGRV 60 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT 87 N+RRLKNGFST+HPLRFDE EA+ERWT Sbjct: 61 NVRRLKNGFSTIHPLRFDECEAIERWT 87 >UniRef50_C5V7S5 Integrase family protein n=3 Tax=Proteobacteria RepID=C5V7S5_9PROT Length = 217 Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 82/182 (45%), Positives = 110/182 (60%), Gaps = 7/182 (3%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R YLT EV ++ A G G RD LI+L YRHG+R+SEL+ L + +DL +G ++I Sbjct: 41 REYLTEHEVDQLISAAGKVGRHGHRDATLIMLTYRHGLRVSELVSLRWDQVDLRQGLMHI 100 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 RLK G +VHP+R E A+ R ++ +F S R + L+ +I+ Sbjct: 101 NRLKQGNPSVHPIRGPELRALRRLQRDYPVLP------YLFSSERKAPLTDDAIRKIVGR 154 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 AG+EA HPHMLRHACGY+LA+ G DTR IQ YLGHRNI+HTVRYT ++ RF Sbjct: 155 AGVEARLPFTVHPHMLRHACGYKLAQAGQDTRAIQHYLGHRNIQHTVRYTQLSSDRFKNF 214 Query: 183 WE 184 W+ Sbjct: 215 WK 216 >UniRef50_A0YRP7 Type 1 fimbriae Regulatory protein fimB n=3 Tax=Cyanobacteria RepID=A0YRP7_9CYAN Length = 193 Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 81/182 (44%), Positives = 109/182 (59%), Gaps = 7/182 (3%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +R YL KEV+A+ +A +G G RD +ILL +RHG+R +EL+ L + +DLN+G I Sbjct: 16 EREYLRPKEVEAIHKAAHSFGRHGVRDAAIILLMFRHGLRTAELVSLKWSQIDLNDGYIE 75 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I R+K+G + HPLR E ++ + ++ T +F+S R + LS + II Sbjct: 76 IIRVKHGHDSTHPLRAPELRSLRQIKRDYPE------TQYVFVSERKAPLSTRTIRHIIA 129 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 AG AG +PH LRHACGY LA G DTR IQDYLGH+NI HTVRYT + RF Sbjct: 130 RAGELAGLKESVYPHQLRHACGYYLASLGHDTRAIQDYLGHKNIHHTVRYTQMSPQRFES 189 Query: 182 LW 183 W Sbjct: 190 FW 191 >UniRef50_B7KMC0 Integrase family protein n=2 Tax=Cyanothece RepID=B7KMC0_CYAP7 Length = 204 Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 107/181 (59%), Gaps = 7/181 (3%) Query: 4 RRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R YL EV+AM++A G G RD +ILL +RHG+R +EL+ L + +DL G I + Sbjct: 28 REYLRPYEVEAMIKAARKVGRHGVRDSAIILLMFRHGLRTAELVTLKWSQIDLTGGYIEV 87 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R+K+G ++HPLR E A+ R + T +F+S R + LS + ++ Sbjct: 88 HRVKHGHDSIHPLRSSELRAL------RQIQRDYPETQYVFVSERKAPLSTRTIRHLVAR 141 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 AG+ A HPH LRHACGY LA +G DTR IQDYLGH+NI HTVRYT + +RF Sbjct: 142 AGLLANIGEAVHPHQLRHACGYYLASQGHDTRAIQDYLGHKNIYHTVRYTQMSPSRFETF 201 Query: 183 W 183 W Sbjct: 202 W 202 >UniRef50_C6MXI5 Phage integrase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MXI5_9GAMM Length = 229 Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 78/182 (42%), Positives = 108/182 (59%), Gaps = 7/182 (3%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R YLT E+ ++ A G G RD +ILLAYRHG+R+SEL+ L + +DL +G ++ Sbjct: 53 REYLTPTEIDKLIVAARRTGRHGKRDATMILLAYRHGLRVSELISLCWTQIDLEQGVFHV 112 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R KNG ST HPL E A+ + ++ TD +F++ R + ++ +I+ Sbjct: 113 IRRKNGLSTHHPLFGAELRALRQLKRDYPE------TDYVFMTERKAPITGDTFRKIVAR 166 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 AG A HPHMLRH+ GY+LA G DTR IQ YLGH+NI++TVRYT +A RF G Sbjct: 167 AGEVAKLGLSVHPHMLRHSTGYKLANDGRDTRSIQHYLGHKNIQNTVRYTEMSATRFKGF 226 Query: 183 WE 184 W Sbjct: 227 WS 228 >UniRef50_A7BWK3 Type 1 fimbriae Regulatory protein fimB n=1 Tax=Beggiatoa sp. PS RepID=A7BWK3_9GAMM Length = 178 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 7/181 (3%) Query: 4 RRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R++L EV +++A R+YCL+LL YRH +R+SE +++ + +D I + Sbjct: 2 RKHLLESEVDLLLEATRKSKHYPQRNYCLVLLIYRHALRLSEAINMTWSQIDFANETIYV 61 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R+K S HPLR E A++ Q+ + + +FIS+R L ++ +I Sbjct: 62 ERIKGSVSGTHPLRPVEIMALKLLKQD------TNGSKHLFISQRNKPLGKRSVQHLIAL 115 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 G EAG HPHMLRHACGY LA+ G DTR+IQ YLGH++IR+TV YT ++ RF Sbjct: 116 FGQEAGIEFPVHPHMLRHACGYRLAKEGRDTRVIQAYLGHKDIRNTVIYTELSSKRFDDF 175 Query: 183 W 183 + Sbjct: 176 F 176 >UniRef50_A8ZP48 Phage integrase family protein n=6 Tax=Cyanobacteria RepID=A8ZP48_ACAM1 Length = 205 Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/179 (42%), Positives = 96/179 (53%), Gaps = 7/179 (3%) Query: 3 KRRYLTGKEV-QAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 R YLT EV + +M A G RD L+LL +RHG+R+SE + L + + L I Sbjct: 28 SREYLTLAEVNRLIMAAELRGRHPIRDKALLLLMFRHGLRVSEAISLRWDAVMLELKAIG 87 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I RLK S HPL+ DE E++ E +F+ RG L R +I Sbjct: 88 ITRLKGSVSGTHPLQADEVESLRDLRAE------GYPDPYLFVGERGGHLKRHAVTSLIN 141 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 A + HPHMLRH+CGY LA +G DTRLIQD+LGHRNI+HTV YT N RF Sbjct: 142 RCAELAQLGIKCHPHMLRHSCGYHLANQGLDTRLIQDWLGHRNIQHTVTYTMLNPKRFG 200 >UniRef50_Q2RMN3 Phage integrase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RMN3_RHORT Length = 207 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 94/161 (58%), Gaps = 7/161 (4%) Query: 4 RRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R YLT E+ ++ A + G RD +ILLAYRHG+R+SEL++L + +DL +G +++ Sbjct: 15 REYLTLAEIDRLIAAAQHLGRHDQRDATMILLAYRHGLRVSELVELRREQVDLRQGLLHV 74 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 RR KNG + HPLR E A+ + +E +F+S RG+ ++ +++ Sbjct: 75 RRRKNGLPSTHPLRGPELRALNKLLREYPE------NAYVFVSERGAPMTAATFRKLLAR 128 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHR 163 AG A HPHMLRH+ G++LA G DTR IQ YL H+ Sbjct: 129 AGDAAKLGMPIHPHMLRHSTGFKLANDGQDTRAIQLYLWHK 169 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 3/169 (1%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFST-VHPLRFDEREAV 83 G RD L+ + Y G+R+SE L L + +DL++ + + L G + PL E + Sbjct: 139 GLRDLALLEVLYGSGLRVSEALGLDFAHVDLDQKLVRV--LGKGRKERLVPLTGPAAERL 196 Query: 84 ERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 R+ ++R + A R A+F+ +RG RLSR+QA RI+++ + +G PH LRH+ Sbjct: 197 ARYIEQRGAFAPAAREQAVFLGKRGGRLSRKQADRIVKEMAVRSGAPCSISPHTLRHSFA 256 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEK 192 + + GAD R +Q+ LGH I T RYT + A+ +++ + + K Sbjct: 257 SHMLQAGADLRSVQELLGHSRISTTQRYTHLDLAQVMRVYDAAHPLAAK 305 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 7/183 (3%) Query: 6 YLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +L+ +E+ +++ C GARD ++ L Y G+R+SEL DL+ QD+D + +R Sbjct: 116 FLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDIDAGSSLLRVRG 175 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 N V PL EA ++ + R D+ +A+ ++ +G+RLS + RI+ Sbjct: 176 KGNKERIV-PLTNYALEAARQYLEMRE-----DKQEALLLNYQGTRLSVRSIRRILDGLA 229 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 +EAG HPHMLRH+ L + GAD R +Q+ LGH + T YT R ++E Sbjct: 230 LEAGLSQHLHPHMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLTKERLREVYE 289 Query: 185 RNN 187 +N+ Sbjct: 290 QNH 292 >UniRef50_D0CZ08 FimB n=1 Tax=Citreicella sp. SE45 RepID=D0CZ08_9RHOB Length = 170 Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 6/142 (4%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + +R YL ++ ++ A G RD+ LIL+ +RHG+R+SE + +D+DL + RI Sbjct: 19 IRRRDYLGQPDIDRLLAAAKKSRHGVRDHLLILMMFRHGLRVSEEIAFRRRDVDLAQSRI 78 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 I RLKNG S P+ DE A++RW R D +F+S R L+RQ I+ Sbjct: 79 WITRLKNGLSVEQPVAGDELRAIKRWLARR-----DDALPWLFVSERKLPLTRQAVNYIV 133 Query: 121 RDAGIEAGTVTQTHPHMLRHAC 142 AG AG + + HPHMLR Sbjct: 134 ATAGTRAG-LERVHPHMLRQPP 154 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 16/185 (8%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLI-LLAYRHGMRISELLDLHYQDLDLNEGRINI- 62 +YL+ EV+ +++A + RDY +I LLAY G+R+SEL +L +D+D NE + + Sbjct: 107 KYLSEDEVKRLIEA---SSENPRDYAIISLLAY-SGLRVSELCNLKIEDVDFNERIVYVH 162 Query: 63 --RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K+ V P EA++ + R D + +F S++ +++SR Q +RI+ Sbjct: 163 SGKGDKDRIVVVSPRVI---EALQNYLYTRE-----DDMEYLFASQKSNKISRVQVFRIV 214 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + +AG + PH+LRH L RG D R IQ +LGH ++ T YT + A Sbjct: 215 KKYAEKAGIKKEVTPHVLRHTLATTLLRRGVDIRFIQQFLGHSSVATTQIYTHVDDALLK 274 Query: 181 GLWER 185 ++++ Sbjct: 275 SVYDK 279 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 6/166 (3%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD ++ L Y G+R+SEL ++ +D+D ++G I IR K + P+ EAV+ Sbjct: 137 GLRDRAILELFYSSGIRVSELTGINEEDMDFSQGLIRIRG-KGKKERIVPIGQPASEAVQ 195 Query: 85 RWTQERANWKGADRTDA-----IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLR 139 R+ ++ + + + A +F++RR RLS + RI+ +G Q PH LR Sbjct: 196 RYMMKKPGSETSGKAVATCPVPLFVNRRQGRLSARSVARILSKYVSMSGLQKQISPHTLR 255 Query: 140 HACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 H+ L + GAD R IQ+ LGH ++ T +YTA + R +++R Sbjct: 256 HSFATHLMDAGADLRSIQELLGHESLSTTQKYTAVSVNRLMAVYDR 301 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 12/179 (6%) Query: 5 RYLTGKEVQAMMQAVCY---GATGARDYCLILLAYRHGMRISELLDLHYQDL---DLNEG 58 + LT ++ +M+ V Y ARD ++ L Y G R+SEL+ ++ DL D ++G Sbjct: 112 KALTISQIVSMID-VAYREGQPITARDQAMLELLYSSGARVSELIGINLNDLSSIDTSDG 170 Query: 59 RINIRRL--KNGFSTVHPLRFDEREAVERW---TQERANWKGADRTDAIFISRRGSRLSR 113 ++ +L K + PL +AVE + + K + T A+F++ RGSR+SR Sbjct: 171 KVTTLKLRGKGAKERIVPLGSFATKAVENYLVRVRPDLASKSSKVTSALFLNSRGSRISR 230 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 Q A++++ DA AG PH+ RH+ L GAD R++Q+ LGH ++ T YT Sbjct: 231 QSAWQMVLDAADAAGITEHVSPHVFRHSYATHLLNGGADIRVVQELLGHASVTTTQIYT 289 >UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae RepID=D1B5G4_THEAS Length = 297 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 8/168 (4%) Query: 7 LTGKEVQAMMQAVCYGATG-ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT EV +++A A G RD +I L Y G+R SEL L +DLDL+ G + +R Sbjct: 116 LTEGEVLRLLEATAGDAPGDLRDRAMIELLYGCGLRASELCSLTMKDLDLSSGTVRVRG- 174 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K V PL + R A+ER+ + R +G IF RG R+ +++I+ G Sbjct: 175 KGDKVRVLPLVGETRSALERYLKVRGTHQGP-----IFQGDRGGPFRREMLWKMIQRRGR 229 Query: 126 EAG-TVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +A ++ HPH+LRH+C L RG D R +Q LGH ++R T YT Sbjct: 230 QACIAASRLHPHILRHSCATHLLRRGMDLRTLQCLLGHSSVRTTEVYT 277 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 6/166 (3%) Query: 11 EVQAMM-QAVCYGATGA-RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNG 68 +V+A++ Q V G++ A RD ++ L Y GMR++EL++L+ D+DL EG + R G Sbjct: 120 QVRALLNQPVKSGSSEAKRDKAMLELLYASGMRVTELVNLNVLDVDLKEGFV--RCFGKG 177 Query: 69 FST-VHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIE 126 + P+ ++++ + T+ R N A+ A+F++RRG RL+RQ ++I++ E Sbjct: 178 RKERMIPIYPQAAQSIQEYLTEIRPNLVRAETEKALFLNRRGDRLTRQGLWQILKGYARE 237 Query: 127 AGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 AG PH LRH+ + GAD R +Q+ LGH NI T YT Sbjct: 238 AGLDDVVTPHTLRHSFATHMLSGGADLRSVQELLGHANISTTQIYT 283 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 11/189 (5%) Query: 5 RYLTGKEVQAMMQAV-----CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + LT EV A++++V G R+ L+ L Y G RISE + L D+D + R Sbjct: 121 KSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVD-TQAR 179 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERW-TQERANW----KGADRTDAIFISRRGSRLSRQ 114 + + K G + P+ +A++ + + R++ G T AIF++ RG RLSRQ Sbjct: 180 TVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQ 239 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 A+++++DA AG + PHMLRH+ L E GAD R++Q+ +GH ++ T YT Sbjct: 240 SAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLV 299 Query: 175 NAARFAGLW 183 +W Sbjct: 300 TVQALREVW 308 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +L E++ ++ + G R+ +I L Y G+R+SE++DL DLDL E ++R + Sbjct: 109 FLMYDEIETLLLSCDESVLGVRNQVMIELMYACGLRVSEVVDLQIHDLDLTER--SLRVI 166 Query: 66 KNGFSTVHPLRFDEREAVERWTQ---ERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 G + L F E + W+ R + T+A+F+++RG L+ + I+ Sbjct: 167 GKG-NKERQLFFYESLVPKLWSYLNLYRPQFPNVSDTEAVFLNQRGKPLTPRGIQHILEH 225 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 G AG + HPHMLRH+ L + GA R++Q LGH ++ T YT + + + Sbjct: 226 QGKTAGLRMKLHPHMLRHSFATHLLDNGASLRVVQTLLGHESLSTTQIYTHVSMQKIKEV 285 Query: 183 WE 184 ++ Sbjct: 286 YD 287 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 3/175 (1%) Query: 12 VQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFST 71 VQ + Q A G RD ++ L Y GMR+SEL+ + D+++ G + R + Sbjct: 127 VQLLNQPELDSAKGIRDKAMLELLYATGMRVSELISMKLTDVNMAMGYVLCR--DSDKER 184 Query: 72 VHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTV 130 V P + +A++R+ +E R+ ++ +F++ G +SRQ ++II+ +AG Sbjct: 185 VIPFGTEAEKALKRYLEESRSVLLKGKESEFLFVNCSGKSMSRQGFWKIIKFYSAQAGIT 244 Query: 131 TQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 PH LRH+ G L + GAD R +Q+ +GH +I T Y N R ++ + Sbjct: 245 KDITPHTLRHSFGAHLVQNGADLRAVQEMMGHSDISTTQIYMDMNVRRVREIYAK 299 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 16/177 (9%) Query: 7 LTGKEVQAMMQAVC-YGATGA---RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ +EV +++A +G++ A RD L+ Y G RISE + + ++D+DLNE + + Sbjct: 129 LSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVGVKFEDIDLNESVVKL 188 Query: 63 -------RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQ 115 R + G V LR +E+ E A KG IF+++RGS LSRQ Sbjct: 189 TGKGSKQRLVPIGGCAVRALR----NYMEKSRPELA-LKGKRELHTIFLNKRGSALSRQS 243 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 A+ I+ AG A HPH LRH+ L GAD R +Q+ LGH ++ T YT Sbjct: 244 AWEIVTQAGERAKLDKPLHPHTLRHSLATHLIAGGADVRTVQELLGHASVTTTQIYT 300 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 3/168 (1%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +V+A++ A G A G RD ++ L Y G+R+SEL+ L ++ LN+G + + Sbjct: 157 LSEAQVEALLAAPEVGTALGLRDRTMLELMYASGLRVSELVMLKTVEVGLNDGVVRVMG- 215 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P +ER+ +E R GA +DA+F++ RG ++RQQ + II+ Sbjct: 216 KGSKERLVPFGEVAHGWIERYLREARPALLGARTSDALFVTARGEGMTRQQFWNIIKRHA 275 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + A PH LRHA L GAD R++Q LGH +I T YT Sbjct: 276 MRAEIRAHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYT 323 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 9/176 (5%) Query: 5 RYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + L+ EV ++ +V + RD L+ Y G RISE L DLD+ + + Sbjct: 110 KALSEDEVARILASVTGVDSFALRDRALLEFLYATGARISEACGLSLSDLDMESQLVRLF 169 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQE-------RANWKGADRTDAIFISRRGSRLSRQQA 116 K + P + A+E W W D DA+F+ RG+RLSRQ A Sbjct: 170 G-KGSKERIVPFGSHAKAALEEWLGAGGRTMLVSEQWAKRDHADAVFLGSRGTRLSRQAA 228 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +RI++ A + PH+LRH+C + GAD R++Q+ LGH ++ T YT Sbjct: 229 WRIVQKFAQIAEVGDEVSPHVLRHSCATHMLIHGADLRIVQELLGHASVSTTQVYT 284 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 88/167 (52%), Gaps = 1/167 (0%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDL-NEGRINIRR 64 Y++ +EVQ +++A G R+ ++ L Y G+R+SE+ L +D+ L ++ + ++ Sbjct: 116 YISYEEVQKILEAFPETHLGKRNRAIVALMYYCGLRVSEVCSLTLRDISLESDPLVRVKS 175 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + PL D + + + R + A+R +F+ RG ++R+ +++++ Sbjct: 176 GKGDKDRIVPLTPDAVRIISDYLKHRDRFPDANRHIKLFVGIRGEPITRKSVNKMLQNHV 235 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + HPH+ RH+C L +RGA +++Q+ LGH NI T Y Sbjct: 236 KKIFPDKHLHPHIFRHSCATHLLQRGASIKIVQEILGHANISTTSIY 282 >UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desulfovibrio RepID=Q311L4_DESDG Length = 332 Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 80/162 (49%), Gaps = 6/162 (3%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD L L Y G+RISE L L D + G I + K + PL R+A++ W Sbjct: 161 RDLALAELLYGSGLRISEALALDLCHTDPSSGLIKVTG-KGSKERIVPLSDTSRQALQLW 219 Query: 87 TQERANWK---GADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 R GA++ A+F+ RG RL+R+QA RII D AG PH LRH+ Sbjct: 220 LDVRETLDVSGGAEQ--AVFLGARGGRLNRRQALRIIEDLCRAAGLPQAVSPHALRHSFA 277 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 L E GAD R +Q+ LGH + T RYT + +++R Sbjct: 278 THLLEAGADMRSVQELLGHERLTTTQRYTHLTLRKIVEVYDR 319 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 4/167 (2%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT +E+ ++ AV G RD ++ + Y G+R+SEL L DL EG I + Sbjct: 118 LTVEEIDRIVAAVDTSTVKGRRDSAMLEVLYSCGLRVSELTSLRLGDLFFGEGYIRVTG- 176 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + P+ RE ++R+ +RA A +D +F++ RG++L+R + I+R+A Sbjct: 177 KGDKQRLVPVSGAAREKIQRYLDDRATKTSA--SDVVFLNNRGTQLTRVMVFTILREAVH 234 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 AG PH RH+ L E GA R +Q+ LGH +I T YT Sbjct: 235 RAGIDKHISPHTFRHSFATHLLEGGASIRQVQEMLGHESILTTEIYT 281 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 13/192 (6%) Query: 6 YLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +L G E+ +++A G RD ++ Y G+R+SEL+ ++ +DLDL+EG + IR Sbjct: 112 FLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDLDLDEGVVRIRG 171 Query: 65 LKNGFSTVHPLRFDEREAVERW-----------TQERANWKGADRTDAIFISRRGSRLSR 113 K + PL A+++W + R + A +F ++ G RL+ Sbjct: 172 -KGSKERLAPLGSFALRAIKKWLAHRKLASISVSSTRKSASKAGHGTPVFTNKFGKRLTT 230 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + R++ G +T PH LRH L +RGAD R +Q+ LGH+++ T YT Sbjct: 231 RSVARMLEKYLKLTGLDLRTTPHTLRHTFATHLLDRGADIRSVQELLGHKSLVTTQIYTH 290 Query: 174 SNAARFAGLWER 185 + A ++ER Sbjct: 291 VSTAALKAVYER 302 >UniRef50_Q1VYR3 Putative site-specific recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VYR3_9FLAO Length = 296 Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD+ +I L Y GMR EL+DL LDL + ++ +R +N + PL +E Sbjct: 130 GLRDHLIIELLYATGMRRQELIDLQLSSLDLKQQQLKVRGKRNKERLI-PLLDSISFLIE 188 Query: 85 RWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 R+ QER+ + +F++ +G + YR++ + T + PH+LRHA Sbjct: 189 RYLQERSVL--LPQGSQLFVTSKGKAIYPNLVYRVVHSYFEKVSTKKKLSPHLLRHAFAT 246 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 L ++GAD I+D LGH ++ T YT SN Sbjct: 247 HLLDKGADISAIKDLLGHSSLASTEVYTHSN 277 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 5 RYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 ++LT + +++A T RD ++ L Y G+R+SEL L+ +DLDL EG I +R Sbjct: 108 KFLTVDDAFKLVEAPSEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDLKEGLIKVR 167 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWK-----GADRTDAIFISRRGSRLSRQQAYR 118 K + P+ +EA++++ R + D T +FI+ RG R+S +Q R Sbjct: 168 G-KGKKERIVPVGQKAKEALKKYLAIRQILRIKKKLSLDET-PLFINNRGQRISDRQVRR 225 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I+ G + + PH LRH L GAD R+IQ+ LGH ++ T YT + Sbjct: 226 IVEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYTHVDLKH 285 Query: 179 FAGLWERNNLINE 191 ++++++ +++ Sbjct: 286 LIEVYDKSHPLSK 298 >UniRef50_B8DL21 Integrase family protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL21_DESVM Length = 371 Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 75/150 (50%), Gaps = 1/150 (0%) Query: 36 YRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG 95 Y G+R+SE L+L+ D D G + + K G + PL R+A+ W R Sbjct: 181 YGSGLRVSEALELNVLDADPASGVVRVMG-KGGRERMSPLSDTARDALSAWLAVRHQVDE 239 Query: 96 ADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRL 155 A+F+ RG RL+R+QA RII + AG PH LRH+ L E GAD R Sbjct: 240 GRGEPALFLGARGGRLNRRQAARIIETLCLRAGLPQAISPHGLRHSFATHLLEAGADLRS 299 Query: 156 IQDYLGHRNIRHTVRYTASNAARFAGLWER 185 +Q+ LGH + T RYT +R +++R Sbjct: 300 VQELLGHARLSTTQRYTHLTLSRLVDVYDR 329 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 7/186 (3%) Query: 2 SKR--RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 SKR + + +++ ++ + + + RD ++ L Y G+R+SEL L D+DL GR Sbjct: 111 SKRLPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGLDLGDMDL-AGR 169 Query: 60 INIRRLKNGFST-VHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR 118 +R L G + P+ EA+ RW R +K D +A+F+++RG RLS + Sbjct: 170 -EVRLLGKGNKERIVPIGSKALEALNRWLAVRNQFKPQD--NAVFLNKRGGRLSHRSIQL 226 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ G + G + HPH LRH+ + E D R +Q+ LGH N+ T YT + Sbjct: 227 VMQKWGEKQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSNLATTQIYTHLDFQH 286 Query: 179 FAGLWE 184 A +++ Sbjct: 287 LAKIYD 292 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 7/187 (3%) Query: 5 RYL--TGKEVQA--MMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 RYL T E+Q +++ + A G RD L+ L Y G+R+SEL++ ++LDL+ Sbjct: 124 RYLPETMNELQVDRLLEGISIDAPRGLRDRALLELLYASGLRVSELVNARLENLDLDARI 183 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYR 118 I + N V P+ +A+ + + ER G +F+S RG++L+ + ++ Sbjct: 184 IRVTGKGNKMRLV-PVGQKACDAIRAYLEKERPEMVGKKTGSEVFLSSRGTKLTTVRIWQ 242 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I++ AG +PH+LRH+ L GAD R+IQ+ LGH +I T YT + R Sbjct: 243 IVKACAKNAGLDINVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQIYTHVDQQR 302 Query: 179 FAGLWER 185 + R Sbjct: 303 LKAVHHR 309 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 2/154 (1%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 VC A +R+ C++ L Y GMRISELL+L +DL++ G I + N + P+ Sbjct: 127 VC-DAISSRNRCMVELLYATGMRISELLNLTLKDLNIKMGFIKVIGKGNKERMI-PIGSY 184 Query: 79 EREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHML 138 E +E++ + +F ++ G RLSR++ Y I++ + PH Sbjct: 185 VGEILEQYINDYRAEFNIKNDSLLFFNKHGQRLSREEFYSILQTIVNSTSITKKVSPHTF 244 Query: 139 RHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 RH L E GAD R IQ+ LGH +I T YT Sbjct: 245 RHTFATHLLENGADLRSIQELLGHSDISTTTIYT 278 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 15/174 (8%) Query: 7 LTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI--- 62 L+G+EV+A++ + GA RD ++ L Y G+R+SEL+ L +++L+ G + Sbjct: 108 LSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKLSEVNLSAGYLMTIGK 167 Query: 63 ----RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR 118 R + G S H ++A +E+A + +F+SR G +SRQ + Sbjct: 168 GDKERLVPMGESACHATGVYLQQARGELLKEKA-------STLLFLSRLGGGMSRQAFWN 220 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 II+ ++AG T PH LRH+ L E GAD R +Q LGH ++ T YT Sbjct: 221 IIKKRALQAGVRTSISPHTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYT 274 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 4/181 (2%) Query: 7 LTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +EV+ ++ Q C G RD ++ L Y G+R+SEL+ L+ D++ + G I Sbjct: 111 LSTQEVELLLDQPKCLDLKGIRDKAMLELLYATGIRVSELISLNLDDINFDLGLIKCN-- 168 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRDAG 124 K P+ AV + ++ N+ D + A+F++ G RL+RQ ++II+ Sbjct: 169 KGTRERTIPIGSISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQGFWKIIKHYK 228 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 +A PH LRH+ L E GAD R IQ+ LGH +I T Y + +++ Sbjct: 229 NQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQIAKNKIKDVYK 288 Query: 185 R 185 + Sbjct: 289 K 289 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 4/159 (2%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVER 85 ARD + L Y G+R+SE + L+ D+D ++ + IR K G + P+ + + Sbjct: 127 ARDRAIFELVYSCGLRLSETVALNLDDVDFSDSLLRIRG-KGGKERLVPIGAEAMLRLRT 185 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 W ER+ G D A+F+ R G RL +Q + +RD I+ G HPHMLRH+ Sbjct: 186 WLGERS--AGMDEP-ALFLGRHGHRLGGRQVEKRLRDWAIKTGAGQHVHPHMLRHSFASH 242 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + + D R +Q+ LGH N+ T YTA + A +++ Sbjct: 243 MLQSSGDLRAVQELLGHANLSSTQIYTALDFQHLAKVYD 281 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 2/182 (1%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ ++V+A++QA A G RD + + Y G+R+SELL+L + ++L +G + I Sbjct: 123 LSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLRITGK 182 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 N V PL + VER+ E TD +F+++ G +SRQ + I+ + Sbjct: 183 GNKERLV-PLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKHYAL 241 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 +A + PH LRHA L GAD R++Q LGH ++ T YT R L E+ Sbjct: 242 QANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQLHEK 301 Query: 186 NN 187 ++ Sbjct: 302 HH 303 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 4/169 (2%) Query: 7 LTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ ++V+ +++A+ G R+ C+I + Y G+R+SEL+DL +++ E + + Sbjct: 115 LSFEDVERIIKAINISTDLGRRNQCMIEVLYGCGLRVSELIDLKISNINFKELYLKVDG- 173 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRT-DAIFISRRGSRLSRQQAYRIIRDA 123 K S PL + ++ + QE R+ +K + D +F++ RGS +SR + II++ Sbjct: 174 KGDKSRFVPLATYTAKLIKEYIQEIRSKYKINKKCEDVLFLNSRGSAMSRVIVFIIIKEL 233 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +AG + PH RH+ L + GAD R IQ+ LGH +I T YT Sbjct: 234 TEKAGINKKISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYT 282 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 3/147 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPL-RFDEREAVER 85 R L+ L Y G RISE + L DLDL + + K G + PL R+ + Sbjct: 250 RATALLELLYGTGARISEAVGLDVDDLDLEAASVRLHG-KGGRDRIVPLGRYAIAAVADY 308 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 R A+F+SRRG+RLSRQ A+ ++R A + AG V PH+LRH+ Sbjct: 309 LRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVLRTAALAAG-VEGVSPHVLRHSFATH 367 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYT 172 L + GAD R++Q+ LGH ++ T YT Sbjct: 368 LLDGGADVRVVQELLGHASVSTTQIYT 394 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 28/193 (14%) Query: 7 LTGKEVQAMMQAVC-YGATGA---RDYCLILLAYRHGMRISELLDLHYQDLDLNE----- 57 L+ EV+ ++ A +G+T A RD L+ Y G R+SE + L ++D+DL E Sbjct: 125 LSISEVERVIDAAGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFEDIDLTESVVRL 184 Query: 58 ------------GRINIRRLKNGFSTVHPLRFDEREAVERWTQER------ANWKGADRT 99 G+ +R L++ + P+ + + R ++ K A+ T Sbjct: 185 SGKGQKQRLVPIGKCAVRALRDYLANARPILASRAQKSPATAKSRLKSPLNSSSKSAN-T 243 Query: 100 DAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDY 159 IF+++RG LSRQ A+ I AG A + HPH LRH+ L GAD R +Q+ Sbjct: 244 HVIFLNKRGKSLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISGGADVRTVQEL 303 Query: 160 LGHRNIRHTVRYT 172 LGH ++ T YT Sbjct: 304 LGHASVTTTQIYT 316 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 7/185 (3%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 R L ++ A+MQ + + RD L+ + Y G+R+SE + L D+DL+ +R Sbjct: 111 RTLPPEQTAALMQPT-HASADRRDLALLAVMYGAGLRVSEAVGLDLHDIDLHS--CELRV 167 Query: 65 LKNGFST-VHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRD 122 L G + PL + + +W ER G R + A+F++R G RL+ + R+++ Sbjct: 168 LGKGSKQRIVPLPTTAADLLGQWLDER--LLGLVRDERAVFLNRFGQRLTARSVQRMLKT 225 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +E+G PH LRH+ L G D R IQ+ LGH ++ T RYT + A+ + Sbjct: 226 RALESGADISVTPHRLRHSFATHLLAGGVDLRAIQELLGHASLATTERYTHLDIAKLTEV 285 Query: 183 WERNN 187 ++R++ Sbjct: 286 YDRSH 290 >UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE8_9DELT Length = 327 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 11/166 (6%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 A ARD+ L L Y G+RISE L L DL L+E + + K + PL A Sbjct: 160 ALAARDHALAELLYGSGLRISEALGLDVTDLRLDESVVRVFG-KGARERMSPLSDTSVTA 218 Query: 83 VERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR----IIRDAGIEAGTVTQTHPHML 138 + W ++R + A+F+ RG RL R++A R + R+AG+E PH L Sbjct: 219 LRAWLEQRGTL-APEGEKALFVGARGGRLDRREAMRRIERLCRNAGVEP-----VSPHAL 272 Query: 139 RHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 RH+ L + GAD R +Q+ LGH+ + T RYT + R L++ Sbjct: 273 RHSFATHLLDAGADLRSVQELLGHQRLTTTQRYTRVSLERLMHLYD 318 >UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB85_BRAFD Length = 332 Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 9/160 (5%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+R+SEL+ L +D G + +R K + P+ EA++RW Sbjct: 164 RDAAVLELLYSSGLRVSELVALDRSRIDRQHGTVRVRG-KGDRERIVPVGLPALEALQRW 222 Query: 87 TQE------RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI-EAGTVTQTHPHMLR 139 E A G DA+F+ RG RL +A R + D + EAG PH LR Sbjct: 223 ESEGRPVLLAAATPGTPPGDALFLGVRGGRLG-DRAVRTLVDRHVAEAGISRHVTPHTLR 281 Query: 140 HACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 H+ L E GAD R +QD+LGH ++ T YT +A R Sbjct: 282 HSAATHLVEGGADLRSVQDFLGHSSLATTQIYTHVSAERL 321 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 5/181 (2%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L KE+++ ++ G R+ ++ Y G+R+SEL++L+ Q++DL E + R Sbjct: 109 LDPKEIESFLKIPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDLEEKYV--RCF 166 Query: 66 KNGFST-VHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 G + PL E+++R+ R + D+ +A+F++++G R++RQ + II+ Sbjct: 167 GKGEKERIVPLGDYAVESLKRYLSVRHLFNPKDK-EALFLNKKGERITRQGVWFIIKAYS 225 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 G + PH RH+ L GAD R++Q+ LGH +I T YT +++ +++ Sbjct: 226 KILGLPKKVSPHTFRHSFATHLLSNGADIRIVQELLGHSDIATTQIYTHIVSSKLHEVYQ 285 Query: 185 R 185 R Sbjct: 286 R 286 >UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE10_9GAMM Length = 292 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 6/159 (3%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ + Y G+R+SEL+ L +D+D ++G + + K PL ++++ R+ Sbjct: 131 RDAAMVEVLYSCGLRVSELVGLDIEDVDASQGFLRVMG-KGSKVRYTPLGESAQKSINRY 189 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 Q K + A+F++ R R+S + II++ + G HPHMLRHA Sbjct: 190 LQ-----KTSHTNKALFVNNRQERISTRTVQNIIKNRALSVGIKVNVHPHMLRHAAATHF 244 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 + D R +Q++LGH++I+ T YT + + ++++ Sbjct: 245 LQSSHDLRSVQEFLGHKSIKSTQVYTHLDFLELSKVYDK 283 >UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus capsulatus RepID=Q60AJ2_METCA Length = 304 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 1/183 (0%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 R L V ++ A RD + L Y G+R+SEL+ L D+D G + +R+ Sbjct: 112 RLLDVDAVAGLLDAPADDRLETRDRAMWELFYSSGLRLSELVGLDVVDVDFGAGSVFVRK 171 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K G + P+ EA+ W + R GA + A+F+SR+G R++ + + Sbjct: 172 GKGGKARYVPVGAKALEAIGAWLEARRVLTGAGQP-ALFLSRQGRRIAPRTVEMRLERWR 230 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + G + HPHMLRH+ + E D R +Q+ LGH + T YT + R A +++ Sbjct: 231 AKLGLSERVHPHMLRHSFASHMLEASGDLRAVQELLGHATLATTQIYTHVDFQRLAAVYD 290 Query: 185 RNN 187 +++ Sbjct: 291 QSH 293 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 4/158 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD + L Y G+R+SEL L DLDL EG + K + + P+ R+A+ERW Sbjct: 151 RDQAMFELLYSCGLRLSELTGLDLADLDLGEGLLTAHG-KGNKTRILPIGRQARQALERW 209 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 R + G A+F + G RLS +Q + + G+ HPHMLRH+ L Sbjct: 210 LAIRPSQPG---EGAVFTGKSGRRLSGRQVEKRLEQWAQRHGSDRHVHPHMLRHSFASHL 266 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + D R +Q+ LGH N+ T YT+ + A +++ Sbjct: 267 LQSSGDLRAVQELLGHANLSTTQIYTSLDFQHLAKVYD 304 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 4/163 (2%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFST-VHPLRFDEREAV 83 G RD ++ L Y G+R+SE+++L D+ L+ G IR G + P+ A+ Sbjct: 131 GYRDKAMLELLYATGIRVSEMIELKTADVHLSMG--FIRCFGKGRKERIVPIGEAAASAI 188 Query: 84 ERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHAC 142 E + T+ R + +DA+F++ G ++SRQ ++ ++ +EAG + PH LRH+ Sbjct: 189 EEYMTKARGKLLKNNVSDALFLNHHGKQISRQGFWKNLKKIALEAGIKKELTPHTLRHSF 248 Query: 143 GYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 L E GAD R +Q+ LGH +I T YT R ++++ Sbjct: 249 ATHLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYKQ 291 >UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobacteria RepID=Q0ACL7_ALHEH Length = 304 Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 6/148 (4%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVH-PLRFDEREAVER 85 RD L L Y G+R++E + L LDL EG + + + G T P+ REA++ Sbjct: 135 RDRALYELIYSSGLRLAEAVGLDLGRLDLTEGLVEV--VGKGAKTRRVPVGGKAREALQA 192 Query: 86 WTQERANWKGADRTDAIFISRRGSRLS-RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 W R GAD A+F+S+RG RLS R R+ R A + +G HPHMLRH+ Sbjct: 193 WLAVRPALAGADEP-AVFVSQRGGRLSARSVQARLARLATL-SGVGRPVHPHMLRHSFAS 250 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYT 172 L E D R +Q+ LGH +I T YT Sbjct: 251 HLLESSGDLRAVQELLGHADIATTQVYT 278 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 5 RYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + L+ +V+A++ A G RD ++ L Y G+R++EL+ L ++ +NEG + I Sbjct: 123 KTLSEAQVEALLAAPDVTTPLGLRDRTMLELMYASGLRVTELVLLKSIEVGMNEGVLRIT 182 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K G + + P + R +ER+ +E R DA+F++ RG+ ++RQ + +I+ Sbjct: 183 G-KGGKTRLVPFGEEARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWTLIKK 241 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 A PH LRHA L GAD R++Q LGH +I T YT Sbjct: 242 HAAAAEINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYT 291 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 2/158 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+RISEL+ + QD+ G I +R N + P+ A+++W Sbjct: 149 RDKAMMELMYSSGLRISELVGANLQDISAANGEILVRGKGNKERLI-PVGSKALNALKKW 207 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 R + D A+F+S + +R+S +Q +++ GI+ G +Q HPH LRH+ + Sbjct: 208 LIIRPQFANPDEV-AVFLSSKKNRISVRQVRLRMQEWGIKQGISSQVHPHKLRHSFASHI 266 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 E D R +Q+ LGH ++ T YT + A +++ Sbjct: 267 LESSGDLRAVQELLGHSSLSATQVYTHLDFQHLAKVYD 304 >UniRef50_B5ZDR0 Integrase family protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZDR0_GLUDA Length = 324 Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 77/164 (46%), Gaps = 5/164 (3%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLD--LNEGRINIRRLKNGFSTVHPLRFDEREAV 83 ARD L LL Y G+RISE L L +DLD L+ G + R K G + P+ + Sbjct: 156 ARDAALFLLLYGCGLRISEALGLDVRDLDHALSAGGTLLVRGKGGRERLVPILPAVARVL 215 Query: 84 ERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 W RA +F RG RL A R +R AG PH LRH+ Sbjct: 216 TDW---RARHPAPLPDAPLFPGVRGGRLQPAVAQRAMRAWRDMAGLPDHATPHALRHSFA 272 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNN 187 L E GAD R IQ+ LGH ++ T RYT ++ AR +W R + Sbjct: 273 THLMEGGADLRTIQELLGHASLSTTQRYTLADEARLTEVWTRAH 316 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 14/179 (7%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGA-----RDYCLILLAYRHGMRISELLDLHYQDLDLN 56 S + L+ EV A++++ C A RD L+ + Y G R+SELL L D+D Sbjct: 112 SIPKALSIAEVTAILES-CPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVDPT 170 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERW---TQERANWKGADRTDAIFISRRGSRLSR 113 E ++ I R K V P+ +A++ + + N KG + A+F++R G R+ R Sbjct: 171 E-KLIIVRGKGSKERVVPVGDPALDALQHYLVRVRPAFNKKG---SAALFLNRNGGRMGR 226 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 Q A+ ++ +AG V PH RH+ L E GAD R++Q+ LGH N+ T YT Sbjct: 227 QSAFNMVSSVSEKAG-VAGVSPHSFRHSFATHLLEGGADIRVVQELLGHSNVVTTQIYT 284 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD L+ L Y G+R+SE + L + +LDL+ G I N V P+ + VE Sbjct: 144 GLRDKALLELMYATGLRVSEAVRLSFGNLDLDRGCITTLGKGNKQRIV-PMGRESVYWVE 202 Query: 85 RWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 R+ +E R DA+F+S++ + +SRQ A+ I+++ +AG + PH LRHA Sbjct: 203 RYYKEARPLLLKGRSCDALFVSQKKTGISRQLAWMIVKEYASQAG-IEHISPHSLRHAFA 261 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYT 172 L + G D R++QD LGH ++ T YT Sbjct: 262 THLVQHGLDLRVVQDMLGHADLNTTQIYT 290 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 2/178 (1%) Query: 11 EVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGF 69 EV+ ++ +V RD ++ L Y GMR+SELL L DL G + K Sbjct: 116 EVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQFELGYLQCEG-KGER 174 Query: 70 STVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGT 129 + + P+ + VER+ Q+ N G T+A+F++ RG RLSRQ +++I+ AG Sbjct: 175 ARIIPVSSVAQSFVERYIQQARNGLGGRETEALFLNGRGGRLSRQGFWKMIKRRAKLAGI 234 Query: 130 VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNN 187 + PH+LRH+ L E GAD R IQ LGH ++ T YT N +R ++ +++ Sbjct: 235 EKEITPHVLRHSFATHLLENGADLRAIQQMLGHADLATTQVYTHVNKSRLHDVYRKHH 292 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%) Query: 5 RYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 ++LT KE++ ++QA G RD ++ L Y G+R+SEL+ L + +I + Sbjct: 117 QFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSELISLKLESYYPEHFQIKVL 176 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRT-DAIFISRRGSRLSRQQAYRIIRD 122 N V P+ +EA++++ E A +T +F+++RG L+R + ++I Sbjct: 177 GKGNKERAV-PIGKCAKEALDKYIAEGRTKLLAKKTRGEVFLNQRGQPLTRSRIRQLIIH 235 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 G + +PH+LRH L E GAD R+IQ+ LGH NI T YT N Sbjct: 236 YARLGGIDKKVYPHLLRHTFASHLVENGADLRVIQELLGHANIATTQIYTHVN 288 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 2/146 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD L L Y G+RISE L L D+ L+ + + K + PL ++ W Sbjct: 209 RDLALAELLYGSGLRISEALSLDVDDVQLSSRVLRVMG-KGSRERLAPLSDTSFSCLKAW 267 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 +ER D A+F+ RG+RL+R++A RI+ AG PH LRH+ L Sbjct: 268 LEERPLLALPDEA-ALFVGARGARLNRREAARIVERLCRRAGLTFTVSPHSLRHSFATHL 326 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYT 172 E GAD R +Q+ LGH+ + T RYT Sbjct: 327 LEAGADMRSVQELLGHQRLTTTQRYT 352 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 71/147 (48%), Gaps = 1/147 (0%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD L+ L Y G+RISE +L D+DL G + +R K G + PL A+E W Sbjct: 153 RDTALLELLYSAGLRISEACNLDRADVDLRGGELRVRHGKGGKQRMVPLGRTAVAAIEAW 212 Query: 87 TQERANWKGA-DRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 Q R K D IF + G RL+ ++ R++ PH LRHA Sbjct: 213 LQARTRAKPQLDPMGPIFTGQLGKRLNSREGQRLLEKWRARLDLPESVTPHALRHAFATH 272 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYT 172 L + GAD R IQ+ +GH ++ T +YT Sbjct: 273 LLQAGADLRAIQEMMGHASLSATQKYT 299 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 8/171 (4%) Query: 10 KEVQAMMQAVC--YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKN 67 +E+ AM++ G G RD LI L Y G RI+E+++L DL L +++ Sbjct: 127 EEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPDDLYLAGEFPHVKLFGK 186 Query: 68 GFST-VHPLRFDEREAVERWTQERANW---KGADRTD--AIFISRRGSRLSRQQAYRIIR 121 G + PL +A+E + K R +F+++RG LSRQ A+ II Sbjct: 187 GRKERLVPLGSFAVQALEDYLLLGRPLLLGKAKTRVAGHPLFLNKRGLSLSRQSAWEIIS 246 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + AG V++ PH LRH+ L E GA R +Q+ LGH ++ T YT Sbjct: 247 QTAVAAGCVSEVSPHSLRHSFATHLLEGGASIRDVQELLGHASVTTTQIYT 297 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 2/159 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD L+ L Y G+R++E+ L+ D+D + + + K + P+ A++ W Sbjct: 138 RDRALLELIYSSGLRLAEVTSLNLGDIDWGDAMVTVTG-KGSKTRTLPVGSVAIAALKDW 196 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 +R + A A+FI++RG R+S + ++ ++ G HPHMLRH+ + Sbjct: 197 LSQREQYAPASEP-ALFITQRGKRISHRAVQLRLQQLSVQQGMDNPVHPHMLRHSFASHM 255 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 E D RL+Q+ LGH NI T YT + A ++++ Sbjct: 256 LESSGDLRLVQELLGHANISTTQIYTHLDFQHLAKVYDK 294 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 11/190 (5%) Query: 7 LTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI--- 62 L+ EV ++++ G ARD ++ L Y G+R+SEL L LDL +G + + Sbjct: 143 LSVDEVFSLLEMPGAGDRFAARDRAILELLYATGLRVSELAGLDLAQLDLADGMVRVVGK 202 Query: 63 ----RRLKNGFSTVHPLR--FDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQ 115 R + G + V + +R+ + R T ++ K A D + ++ RG RL+ + Sbjct: 203 GNKERLVPMGTAAVAAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLVNSRGGRLTSRS 262 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 R+++ AG + PH LRH+ L E GAD R++Q+ LGH ++ T RYT N Sbjct: 263 IERLVKMYAERAGIAARVSPHALRHSFATHLLEMGADLRVVQELLGHASLSTTQRYTHLN 322 Query: 176 AARFAGLWER 185 ++++ Sbjct: 323 LDHLTAVYDQ 332 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 2/169 (1%) Query: 5 RYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + L+ E+ +++A G G RD ++ + Y G+R+SE++ L D+D +G I + Sbjct: 138 KVLSFDEIALLIEAPEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKLADIDRRKG-IVMA 196 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K G + PL A++ + + RA + T +F+S RG L+RQ ++++ Sbjct: 197 LGKGGKRRLVPLGEPALAAIDAYLELRATHPRSAATQVLFLSPRGGPLTRQAVWKLLGGY 256 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 G + PH LRH+ L E GAD R +Q LGH N+ T YT Sbjct: 257 ARAVGIAKPSSPHKLRHSFATHLLEGGADLRSVQALLGHANVVTTEIYT 305 >UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetobacter RepID=B2HX80_ACIBC Length = 308 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 2/174 (1%) Query: 13 QAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTV 72 Q M + RD ++ L Y G+R++EL L +D+D N + I N V Sbjct: 128 QPMPEKPVDQQLWLRDKAMLELLYSSGLRLAELQGLTIKDIDFNRQLVRITGKGNKTRIV 187 Query: 73 HPLRFDEREAVERWTQERANWKG-ADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVT 131 P +E++ W + WKG D+ ++FIS+RG L+ +Q + ++ AG Sbjct: 188 -PFGKKAKESLLNWLKIYNIWKGHFDQNASVFISQRGGALTPRQIEKRVKLQAQRAGVNV 246 Query: 132 QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 HPH+LRH + D R +Q+ LGH N+ T YT + A ++++ Sbjct: 247 DLHPHLLRHCFASHMLSSSGDLRSVQEMLGHSNLSTTQIYTHIDFDHLAQVYDQ 300 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 7 LTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ E+ ++++ A R+ L+ L Y G RISE+L L D+ E I L Sbjct: 173 LSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDITALEETDGILVL 232 Query: 66 --KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSR-LSRQQAYRIIRD 122 K + P+ R+AV+ + ++ A+F++ RG + +SRQ A+++++ Sbjct: 233 TGKGDKQRIVPVGSHARQAVDAYLVRGRPQLNKGKSAALFLNVRGGKAMSRQSAWQVVKQ 292 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 A EAG PH LRH+ L E GAD R +Q+ LGH ++ T YT A + Sbjct: 293 AATEAGITKDISPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIYTHITADSLRAM 352 Query: 183 W 183 W Sbjct: 353 W 353 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 8/171 (4%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ E++ ++ A+ G R+ ++ Y G+R+SEL DL +L ++G + + Sbjct: 114 LSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCGLRVSELTDLKISNLFFDDGFVKVLGK 173 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANW---KGADRTDAIFISRRGSRLSRQQAYRIIR 121 N V P+ D R+ + + E R + KGA+ + +F++RRG++LSR + II+ Sbjct: 174 GNKERLV-PIGRDARKYIGMYRNEVRCHLDIVKGAE--NYVFLNRRGNKLSRVMVFTIIK 230 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + ++ G PH RH+ L E GAD R +Q+ LGH +I T YT Sbjct: 231 NLAVKIGLKKTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYT 281 >UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteria RepID=XERC_ALCBS Length = 307 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 1/158 (0%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+R++ELL L+ +DL+E ++ + N + P+ AV RW Sbjct: 137 RDQAIMELLYACGLRLAELLSLNLDSIDLHESQLLVTGKGNKTRQL-PVGKPALTAVRRW 195 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 Q R + +A+FIS+ G RLS + ++ +E G HPH LRH+ L Sbjct: 196 LQVRPMLIKSSDQNALFISKNGRRLSPSSVQQRLKRHALERGLDAHLHPHKLRHSFATHL 255 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 E D R +Q+ LGH ++ T YT + A +++ Sbjct: 256 LESSGDLRAVQELLGHADLATTQVYTHLDFQHLAQVYD 293 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 5/183 (2%) Query: 6 YLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +LT ++ +++A G RD ++ Y G+R+SEL+ L+ D D + I IR Sbjct: 123 FLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWD-QDANI-IRV 180 Query: 65 LKNGFST-VHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSRLSRQQAYRIIRD 122 L G + P+ +A+ W +ER GA +DA+F++R +RL+ + R++ Sbjct: 181 LGKGRKERIAPIGSFAAKALTHWLEEREAKPGAHPDSDALFLNRLKTRLTSRSVGRMLEK 240 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 ++ G +T PH LRH L + GAD R +Q+ LGH+++ T YT + R Sbjct: 241 YLLQTGLDKKTSPHTLRHTFATHLLDGGADLRSVQELLGHKSLTTTQIYTHVSTKRLLET 300 Query: 183 WER 185 +E+ Sbjct: 301 YEK 303 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 73/150 (48%), Gaps = 3/150 (2%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD L+ Y G R+SE DL L L++G + + K + PL A+ Sbjct: 136 GLRDTALLEFMYATGCRVSEACDLELSSLHLDQGLVVLTG-KGSKQRMVPLGDCALVALL 194 Query: 85 RWTQE-RANWKG-ADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHAC 142 W +E R A R +F+++RGSRLSRQ + +R + AG PH LRH+ Sbjct: 195 AWLEEGRPELVARAPREAHVFVNKRGSRLSRQGCFFRLRQHAVSAGITRDISPHKLRHSF 254 Query: 143 GYELAERGADTRLIQDYLGHRNIRHTVRYT 172 L E GAD R +Q LGH +I T YT Sbjct: 255 ATHLIEGGADLRAVQTLLGHADISTTQVYT 284 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 7 LTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ KEV+ ++ Q C G RD ++ L Y G+R+SEL+ L D++L I R Sbjct: 113 LSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDVNLEMQYI--RCN 170 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTD--AIFISRRGSRLSRQQAYRIIRDA 123 K + P+ A++ + + N R D A+F++ G RL+RQ ++II+ Sbjct: 171 KGARERIVPIGSVSVNALQEYLTKSRNL-LIQRPDEKALFVNVNGKRLTRQGFWKIIKQY 229 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 +A PH LRH+ L E GAD R IQ+ LGH +I T Y R ++ Sbjct: 230 KNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQLAKNRIKEIY 289 Query: 184 ER 185 ++ Sbjct: 290 KK 291 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 4/153 (2%) Query: 22 GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDERE 81 G G R+ C + L Y G+R SEL L D L+EG + I K + P+ Sbjct: 143 GPLGVRNACALELLYGCGLRASELSGLDAGDAFLDEGILRIVG-KGSRERIVPIGGSAAR 201 Query: 82 AVERWTQERANWKGADR--TDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLR 139 + + ++ + R T A+ ++ RG RLSRQ + I+R+AG G + HPH LR Sbjct: 202 CLASYLEDARPLLRSPRRLTPAVMLNARGGRLSRQSIHSIVREAGHVIG-IKDLHPHTLR 260 Query: 140 HACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 H+ L E GAD R IQ+ LGH +I T YT Sbjct: 261 HSFATHLLEGGADLRAIQEMLGHSDISTTQIYT 293 >UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga lettingae TMO RepID=XERC_THELT Length = 286 Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +L E+Q +++ + RDY ++ L Y G+R+SEL +L +DL + + I Sbjct: 111 FLLPSEIQKLLE---FSMKNQRDYLMLSLLYFCGLRVSELCNLRVEDLSFSPAFVKITMG 167 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + PL E +E + G D +F S+ ++ +RI+R + Sbjct: 168 KGKKDRIVPLTSKLAEKLENYITS----CGKSPEDYLFGSQ--IKIHPSTVFRIVRKYTM 221 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 G + HPH LRH L ++G + R++QD LGH N+ T Y Sbjct: 222 MCGIKKRIHPHTLRHTFATHLLQKGVNIRVVQDLLGHSNLSTTSVY 267 >UniRef50_C7GZ04 Integrase/recombinase XerD n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ04_9FIRM Length = 298 Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 10/172 (5%) Query: 6 YLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 Y T +E+ ++ +V +G RD ++ L Y G++++ELL+L D+D+ G I Sbjct: 112 YFTVEEIDLLLASVTDDTDSGIRDKAVLELMYAAGLQLTELLELKMSDVDIRAGLITAGL 171 Query: 65 LKNGFSTVHPLRFDEREAVERWTQE-----RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K V P+ R+AVE++ + + D + +F++ + SRQ ++I Sbjct: 172 KKR---RVIPIGSHARKAVEKYISDVRKLKFSKLSKKDASSPLFVNYLNKKFSRQGIWKI 228 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 +D + G + T P+MLR++ + + GAD + +Q+ +GH NI T +Y Sbjct: 229 FKDYAAKTGIIKFT-PNMLRNSFAVHMLQNGADIKTVQELMGHENISITKQY 279 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 4/186 (2%) Query: 5 RYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + ++ +EV+ + A G RD ++ + Y GMR+SELL L ++L E R I Sbjct: 114 KVMSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNL-ETRYVIA 172 Query: 64 RLKNGFSTVHPLRFDEREAVERW-TQERANW-KGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + PL + ++++ Q R + K D++F++ RG+ ++RQ+ ++IIR Sbjct: 173 YGKGAKERLIPLGQYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQIIR 232 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G++AG PH+LRH+ + + GAD R +Q+ LGH +I T YT R Sbjct: 233 AYGVKAGLQKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTNNRLKK 292 Query: 182 LWERNN 187 ++++ + Sbjct: 293 VFDKTH 298 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 17/176 (9%) Query: 6 YLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI-- 62 +LT EV +++ G RD + L Y G+R+SEL+ L ++LDL+ +I + Sbjct: 110 FLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDLHSHQIRVWG 169 Query: 63 -----RRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQA 116 R + G + ++++ + R KG T A+F++ G RLS + Sbjct: 170 KGSKERIVLMGLPAI--------QSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSARSF 221 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + +AG HPHMLRH L + GAD R++Q+ LGH N+ T YT Sbjct: 222 QERLDKLAHQAGIEKHVHPHMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYT 277 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 3/149 (2%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD L+ L Y G+R+SE + L++ ++DL+ G I K + P+ + V Sbjct: 127 GLRDKALLELMYATGLRVSEAVGLNFGNVDLDRGCITALG-KGDKQRMVPMGQESAYWVG 185 Query: 85 RW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 R+ T+ R DA+F+S++ + +SRQ A+ I+++ +AG + PH LRHA Sbjct: 186 RYYTEARPALLKGRSCDALFVSQKKTGISRQLAWMIVKEYASQAG-IGHISPHSLRHAFA 244 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYT 172 L + G D R++QD LGH ++ T YT Sbjct: 245 THLVQHGLDLRVVQDMLGHADLNTTQIYT 273 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 15/180 (8%) Query: 5 RYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDL-----DLNEG 58 + +T EV +++A ATG RD L+ Y G RISE + L D+ D +G Sbjct: 166 KAITVDEVTRILEAAGTDTATGLRDRALLEFLYSTGARISEAVGLDVDDISLAGDDTEQG 225 Query: 59 RINIRRLKNGFST-VHPLRFDEREAVERWTQE-----RANWKGADRTDAIFISRRGSRLS 112 +R G + PL A+E + A KG T A+F++ RG R+S Sbjct: 226 PAIVRLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKGKG---TPALFLNARGGRIS 282 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 RQ A+ I++ A +A PH LRH+ L E GAD R++Q+ LGH ++ T YT Sbjct: 283 RQSAWTILKVAAEKANITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYT 342 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 2/177 (1%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ ++V+A++ A T G RD + + Y G+R+SELL+L + ++L +G + I Sbjct: 123 LSEQDVEALINAPDISTTLGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGFVRITGK 182 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 N V PL + +E++ E TD +F+++ G +SRQ + I+ + Sbjct: 183 GNKERLV-PLGQYACDWIEKYLAESRPQLYKSNTDYLFLTQHGGIMSRQNFWYAIKRYAL 241 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +A + PH LRHA L GAD R++Q LGH ++ T YT R L Sbjct: 242 QANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQAL 298 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 8/184 (4%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 + LT ++V+ ++ + RD + L Y G+R+SE + ++ E ++ + Sbjct: 23 KALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVGVNLSSF---ESELSFVK 79 Query: 65 L--KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 + K + P+ +EA+E+W ER + A T+A+FI++ G R+S + I + Sbjct: 80 VLGKGKKERMLPVGKFAKEAIEKWLVEREHI--AKDTNALFINKYGKRISIRAMQERIYN 137 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 I G ++ PHMLRH+ + E D R IQ+ LGH ++ T YT N + A + Sbjct: 138 ISIAQG-LSPVSPHMLRHSFATHILESSGDLRSIQEMLGHSSLSTTQIYTKLNFQQLAKI 196 Query: 183 WERN 186 ++R+ Sbjct: 197 YDRS 200 >UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncultured alpha proteobacterium EBAC2C11 RepID=Q5UF10_9PROT Length = 315 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 5/186 (2%) Query: 1 MSKRRYLTGKEV---QAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 MS + L+ E+ M + + + R ++ + Y G+R+SEL+ L N Sbjct: 117 MSAPKSLSEVEIIQLLKMAKTLEPESASLRALAMLEILYATGLRVSELVSLLVVQFRRNP 176 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 I ++ K G + PL R A RW + R + ++D +F R G +SR Q Sbjct: 177 QTILVKG-KGGRERLVPLGETARLAAVRWIECRDSNPAFVQSDYMFPVRGGGPMSRHQLA 235 Query: 118 RIIRDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 R+++ + A V + PH LRH+ + RGAD R +Q LGH +I T YT+S Sbjct: 236 RLLKKLAVAADIEVGRVSPHKLRHSFATHMLNRGADLRSLQSLLGHADISTTQIYTSSRP 295 Query: 177 ARFAGL 182 R AGL Sbjct: 296 ERLAGL 301 >UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEBB Length = 304 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 11/176 (6%) Query: 7 LTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 L+ ++V+ ++ V A ARD ++ L Y GMR+ EL D++ + I++ Sbjct: 126 LSPEKVEEAIEKVSSEDSAVAARDLAIVELLYATGMRVEELCKADVSDVNFSRHIISVVG 185 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRDA 123 K + P A++ W Q R N+ + + + A+F+ RG RL+ +QA R+I Sbjct: 186 -KGDKQRIVPFGAPAEAALKGWLQVRGNFPASAQAEHALFLGVRGGRLNPRQARRVIHKW 244 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 PH LRH+ + E GAD R++Q+ LGH ++ T YT +A R Sbjct: 245 A-------DVSPHALRHSAATAMVEGGADLRVVQEMLGHSSLATTQIYTHVSADRL 293 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 18/188 (9%) Query: 7 LTGKEVQAMMQAV--------CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 LT KEV++++ AV RD ++ Y G+RISEL+ L +D+D +E Sbjct: 143 LTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRISELVKLQKKDIDFDER 202 Query: 59 RINIRRLKNGFSTVHPLRFDE--REAVERWTQERANWKGADRTDAIFISRRGSRLSRQQA 116 I +R V FDE R+ ++ + E N K ++ +FI++ G +L+ + Sbjct: 203 TIRVRGKGEKDRIV---LFDENTRDLIDNYI-ETQNQK----SEYLFINKNGRKLTPRYV 254 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 +I++ +AG + PH+LRH+ L + G D R+IQ LGH ++ T YT + Sbjct: 255 QMMIKEYAEKAGIKKKVTPHVLRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQIYTNVDM 314 Query: 177 ARFAGLWE 184 +++ Sbjct: 315 DTIKSVYD 322 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 2/147 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ Y G+R+SELL L +L +++G + + K + P+ ++R+ Sbjct: 141 RDKAMLEFLYATGVRVSELLGLSRLNLHMDDGFVRVFG-KGSKERLVPVGQTAISWMKRY 199 Query: 87 TQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 E R A D IF++ RG LSR A+ I+R+ + AG PH RH+ Sbjct: 200 LDELRPGMMSATSHDTIFLNSRGGPLSRMAAWNIVREHAVIAGIEKPISPHTFRHSFATH 259 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYT 172 L E GAD R++Q+ LGH +I T YT Sbjct: 260 LLEGGADLRVVQEMLGHSSIIATQIYT 286 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 9/177 (5%) Query: 5 RYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R LT ++V +++ T RD ++ L Y G+R+SEL+ L+ D+DL R + Sbjct: 109 RALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVDLE--RNEV 166 Query: 63 RRL-KNGFSTVHPLRFDEREAVERWTQERANW---KGADRTDAIFISRRGSRLSRQQAYR 118 R + KNG V P+ A+E + N T+A+F++ RG RL+RQ + Sbjct: 167 RCIGKNGRVRVLPINGSAATALEEYFDISRNQLARGSGSSTEALFLNHRGKRLTRQGFWL 226 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 I++ E G ++ PH+LRH+ + G D R +Q+ LGH +I T YT N Sbjct: 227 ILKQYAEELG-LSDLTPHVLRHSFAVHMLNAGFDLRAVQELLGHTSISTTQIYTHLN 282 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 10/172 (5%) Query: 10 KEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNG 68 +EV +M Q A G RD + L Y G+R+SE+ L +D R+ + K Sbjct: 125 EEVDLLMNQPDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTIYSIDDQYIRVYGKGSKER 184 Query: 69 FSTVHP---LRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 + + D+ ++ RW W +++ ++F++ RG + R +R I++ Sbjct: 185 IVPIGSQALMAVDQYLSLYRW-----QWD-SEKEQSLFVTLRGKSMDRISIWRSIKEYAQ 238 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 +AG PH LRH+ L GAD R+IQD LGH NI T RYT ++A Sbjct: 239 QAGITKTISPHTLRHSFATHLLNNGADLRVIQDLLGHANISSTDRYTRVSSA 290 >UniRef50_Q72AD1 Site-specific recombinase, phage integrase family n=5 Tax=Bacteria RepID=Q72AD1_DESVH Length = 474 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 71/146 (48%), Gaps = 2/146 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD L L Y G+RISE L L D D + G + + K + PL +A+ W Sbjct: 261 RDLALAELLYGSGLRISEALGLDVLDADPSAGVVRVLG-KGSKERMSPLSDTSVDALREW 319 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 R + ++ A+F+ RG RL R+QA RII AG PH LRH+ L Sbjct: 320 LHFRHHL-ASEGERALFVGARGDRLDRRQATRIIDALCRRAGLPQSVSPHGLRHSFATHL 378 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYT 172 E GAD R +Q+ LGH + T RYT Sbjct: 379 LEAGADLRSVQELLGHARLATTQRYT 404 >UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase family n=2 Tax=Methanobrevibacter smithii RepID=A5UKA5_METS3 Length = 302 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 94/180 (52%), Gaps = 16/180 (8%) Query: 2 SKRRYLTGKEVQAMMQAVCYG---------ATGARDYCLILLAYRHGMRISELLDLHYQD 52 S +LT KEV+ ++ ++ + T RD ++ L Y G+R+SEL++L + Sbjct: 125 SPPNFLTQKEVKQLLDSITWDENSDSDFRIITKLRDKLIVTLLYSSGLRVSELINLSVDN 184 Query: 53 LDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLS 112 ++ +++I N S V L ++ ++++ ++R +++ + +++ G+ L+ Sbjct: 185 VNFEGKQLSIVGKNN--SRVILLDESTKQLIQKYLEKRT-----QKSNYLVVNKSGNPLT 237 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + +I+ G E+G + PH+LRH+ L E+G + ++IQ LGH N+ T Y+ Sbjct: 238 PRYVQLMIKKYGNESGIEKKITPHILRHSYATHLFEQGVNIKIIQQLLGHSNLSTTQIYS 297 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 18/193 (9%) Query: 7 LTGKEVQAMMQAVCYGATGA--------RDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 L EV++++ AV G+ RD ++ L Y G+R+SEL+ L D+D +E Sbjct: 127 LNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRVSELVSLRINDIDPDER 186 Query: 59 RINIRRLKNGFSTVHPLRFDE--REAVERWTQERANWKGADRTDAIFISRRGSRLSRQQA 116 I IR + V FDE R+ + + + R + ++ +F++R G L+ + Sbjct: 187 TIRIRGKGDKDRIVL---FDENTRDLLMDYLKRRIH-----ESEYLFLNRFGDPLTPRYV 238 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 +I++ +AG + PH+LRH+ L + G D R IQ LGH N+ T YT+ + Sbjct: 239 QMMIKNYARKAGIKKKVTPHILRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQIYTSVDM 298 Query: 177 ARFAGLWERNNLI 189 +++R L+ Sbjct: 299 QTLKNVYDRARLL 311 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 3/175 (1%) Query: 5 RYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + LT ++V ++ A G GARD ++ L Y G+++SEL++L D+ L E R Sbjct: 109 KSLTVEQVDKLLSAPDSGTPQGARDKAMLELLYASGIKVSELVNLSIHDIHL-EMRFLRC 167 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADR-TDAIFISRRGSRLSRQQAYRIIRD 122 + G + P+ E+V + ++ + D DA+F++ G+RL+RQ ++II+ Sbjct: 168 AVSGGKERILPITPIAAESVAFYVRDMRDKLMRDAGEDALFLNSLGTRLTRQGFWKIIKK 227 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 G AG PH LRH+ L GAD R +Q+ LGH + T Y ++ + Sbjct: 228 YGKLAGIDEDITPHTLRHSFAMHLLGNGADLRSVQEMLGHSALSTTGMYQSAKKS 282 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 16/187 (8%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDL-------NEG 58 LT +E + +++A G RD ++ L Y G+R+SEL+ L+ D++L Sbjct: 111 LTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSELISLNKDDVNLELHFLRCTGE 170 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAY 117 R R L G T L RE ER N A+F +RRG R+SRQ + Sbjct: 171 RGKERILPFGGVTAEWLDLYLREGRSHLILDEREN-------PALFPNRRGGRISRQGFW 223 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 ++++ G EAG + PH LRH+ L ERGAD R +Q+ LGH + Y + + + Sbjct: 224 KLMKKYGQEAGITSDITPHTLRHSFAVHLLERGADVRSVQELLGHSDASTIQMYVSRSRS 283 Query: 178 RFAGLWE 184 +++ Sbjct: 284 NLKTVYD 290 >UniRef50_B6ZR00 Site-specific recombinase, phage integrase family n=3 Tax=Escherichia coli O157:H7 RepID=B6ZR00_ECO57 Length = 96 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/85 (43%), Positives = 55/85 (64%) Query: 33 LLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERAN 92 ++A+ HG R SELLDL D+D + ++NIRR+KNGFST HPL DE ++ W ++R Sbjct: 1 MMAFIHGFRASELLDLRLSDIDASGKQLNIRRIKNGFSTTHPLLPDEYNLIKLWLKQRKL 60 Query: 93 WKGADRTDAIFISRRGSRLSRQQAY 117 + D +F+SR+ S +SRQ + Sbjct: 61 IENGVEGDWLFLSRKRSPISRQHFF 85 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 2/162 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+R++EL L +D+D N + I K + + P ++++ W Sbjct: 145 RDKAILELLYSSGLRLAELQGLMIKDIDFNRQLLRITG-KGNKTRIVPFGQKAKDSLIEW 203 Query: 87 TQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 + W+G D A+FIS+RG+RL+ +Q ++ AG HPH+LRH Sbjct: 204 LKIYRIWQGEFNLDSAVFISQRGNRLTPRQIENRVKLQAQRAGVNVDLHPHLLRHCFASH 263 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNN 187 + D R +Q+ LGH N+ T YT + + A ++++ + Sbjct: 264 MLSASGDLRSVQEMLGHSNLSTTQIYTHVDFDQLARVYDQTH 305 >UniRef50_Q1MS58 Site-specific recombinase XerC n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MS58_LAWIP Length = 313 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 A R+ L+ L Y G+RISE L L+ D+ +G + + K + PL A Sbjct: 141 AIAHRNNALLELLYGSGLRISEALCLNVSDIRTEDGFVRVIG-KGNKERLAPLSDTSIVA 199 Query: 83 VERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHAC 142 +E W R + A+F+ RG RL R+Q RI+ + ++AG T PH LRH+ Sbjct: 200 LEEWLAIR-HMVATLGEQALFVGVRGKRLHRRQTIRILEELCLQAGLPLTTAPHTLRHSF 258 Query: 143 GYELAERGADTRLIQDYLGHRNIRHTVRYT 172 L E GA+ R +Q+ LGH + T RYT Sbjct: 259 ATHLLEGGANLRAVQELLGHARLSTTQRYT 288 >UniRef50_A4XJF9 Phage integrase family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJF9_CALS8 Length = 286 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 9/153 (5%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNE--GRINIRRLKNGFSTVHPLRFDEREAV 83 ARD + L GMRISE ++L +D++++E G++ I + V PL D R+ + Sbjct: 129 ARDIAFVELLLNTGMRISEAINLKLEDIEISERKGKVKIWGKGRSYREV-PLNSDARKYL 187 Query: 84 ERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + ++R T+ +F++ G L+R AY+II A HPHMLRH Sbjct: 188 SEYLKKRP----YSETNYLFVTSTGKPLTRNTAYKIILKYAKLASV--DLHPHMLRHFFA 241 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 L ++G + +Q LGH+ I T+RY N Sbjct: 242 QTLIDKGLNLYDVQQLLGHQRIETTLRYKKPNV 274 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 5/152 (3%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G R+ ++ L Y GMR+SEL L DLDL+ + + K P EA+ Sbjct: 133 GQRNQAILELLYATGMRVSELCSLKESDLDLSMDTVLVHG-KGSKQRYVPFGSYAHEALI 191 Query: 85 RWTQE---RANWKGADRTDA-IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRH 140 + ++ + KG DR DA +F+++RG+ L+ + I+ + +A HPHMLRH Sbjct: 192 TYLEDGRLKLKAKGKDRADAYVFLNQRGAPLTDRGVRFILTELMKKASGTLHIHPHMLRH 251 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 L GAD R +Q+ LGH N+ T YT Sbjct: 252 TFATHLLNEGADLRSVQELLGHSNLSSTQVYT 283 >UniRef50_A5FIL1 Phage integrase family protein n=4 Tax=Flavobacteriaceae RepID=A5FIL1_FLAJ1 Length = 297 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 7/181 (3%) Query: 7 LTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI-- 62 + KEV +M V G RD ++ L Y GMR +EL+ L +++DL+ G + + Sbjct: 112 FSEKEVSDLMFGVESPIGFEEVRDKLIVDLFYTTGMRRAELIGLMLKNVDLSSGVVKVLG 171 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 +R K + P+ D+ + + +ER ++ FIS++G +LS YR+I Sbjct: 172 KRSKERIVPLLPIVADQ---INLYIKEREQLDQIVDSEYFFISKKGLKLSESFVYRLINC 228 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 + PH+LRH L GAD +++ LGH ++ T YT ++ A + Sbjct: 229 YFSRVSEKVKKSPHVLRHTFATHLLNNGADLNSVKELLGHSSLASTQVYTHNSLAELKKV 288 Query: 183 W 183 + Sbjct: 289 Y 289 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 3/163 (1%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD ++ + Y G+R++EL+ L DL L+ G I K + PL +E Sbjct: 131 GLRDQAMMEILYATGLRVTELVSLKMDDLHLHMGFIQTIG-KGDKERIIPLGKTATTVLE 189 Query: 85 RWTQE-RANWKGAD-RTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHAC 142 ++ +E R + R D +F++ G L+RQ ++I++ E+G PH LRH+ Sbjct: 190 KYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKILKGIAKESGIEKPITPHTLRHSF 249 Query: 143 GYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 L E GAD R +Q+ LGH +I T YT R ++++ Sbjct: 250 ATHLLENGADLRSVQELLGHADISTTQIYTHVTKLRLKDVYKQ 292 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 3/181 (1%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L EV A+++ G RD ++ L Y GMR+SEL+ L ++++L G + + Sbjct: 111 LNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNLIMGFVRVFG- 169 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + PL E + + + R T+ +F++ G LSRQ +++I+ G Sbjct: 170 KGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKMIKQNG 229 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 ++A PH LRH+ L E GAD R +Q+ LGH +I T YT + ++ ++ Sbjct: 230 VKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRKMYN 289 Query: 185 R 185 + Sbjct: 290 Q 290 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 5/168 (2%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 + L E +++ G RD L+ L Y G+R+SEL L ++DLDL+ G + + Sbjct: 135 QVLDADEAVRLVEVPTDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLDSGLVTVLG 194 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K G + P+ A+ W ++ G +F R G +S++ I+ Sbjct: 195 -KGGKQRLVPVGSHAVAALRAWQRD----SGGSAQTHVFPGRAGGAISQRAVQIRIKQLA 249 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + G HPHMLRH+ + E D R +Q+ LGH +I T YT Sbjct: 250 VRQGMFKHVHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYT 297 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 5 RYLTGKEVQAMMQAV----CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ +EV A++ A + AT R CLI +AY GMR+SE++ L + + + Sbjct: 109 KILSRQEVDALIAAADAKDAHQAT--RLQCLIEIAYASGMRVSEIVALRLDAVQKDPAYL 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSR--LSRQQAY 117 I + K G + PL R A++ + R + A D+ + RG+ L+R++ Sbjct: 167 -IVKGKGGTERLVPLNPSARAAIKDYLDIRPLFLNAKDKANPYLFCSRGAEGHLTRRRVG 225 Query: 118 RIIRDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 +++ +A +EAG + PH+LRHA L E GAD R++Q LGH +I T YT Sbjct: 226 QLLDEAALEAGIDPARVSPHVLRHAFATHLLEGGADLRVVQTLLGHADISTTQVYTHVAT 285 Query: 177 ARFAGLWERNNLINEK 192 R + E ++ ++++ Sbjct: 286 ERLKEVVETHHPLSKR 301 >UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMU3_CLOPH Length = 291 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 5/186 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 ++ RYLT ++V +++ A G RD ++ L Y GM++SE+ L +D++L G Sbjct: 105 IAPPRYLTKEQVLSLLSAPDSNTKRGLRDKAMLELMYATGMKVSEIGGLKKEDINLKFGC 164 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + +R LK + V P R ++E + + + + +F+ R+G ++RQ ++I Sbjct: 165 VTVRELKK--NRVVPFGQAARASLEAYLASEDDVR--KESPYLFLGRQGEPMTRQGVWKI 220 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ G + G P +R++ + E GAD +++ +GH NI T YT Sbjct: 221 MKYYGKQIGLEEDLTPQAIRNSFAIHMIENGADLNSMKELMGHANITATQHYTKQRIGET 280 Query: 180 AGLWER 185 G + + Sbjct: 281 FGTYHK 286 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 3/169 (1%) Query: 7 LTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDL--DLNEGRINIR 63 L KE+ ++ Q G RD ++ Y GMR+SEL++L QDL DL R+ + Sbjct: 115 LNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQDLHEDLGLVRVLGK 174 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + + + ++ ++ K + IF++ R +L+RQ +++I+ Sbjct: 175 GSKERLIPISSVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLTRQAIWQMIKKY 234 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 AG PH LRH L E GAD R++Q+ LGH +I T YT Sbjct: 235 CQSAGITKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYT 283 >UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZA8_ACIFD Length = 299 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 8/186 (4%) Query: 5 RYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 R L EV+ ++++V GARD ++ + Y G+R+SEL + +GR Sbjct: 111 RALARDEVERLIESVGTADVAGARDRAILEVLYGSGVRVSELCGFTLDTI--AQGRWVPV 168 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKG--ADRTDAIFISRRGSRLSRQQAYRIIR 121 K G + P+ R+A+E+W W+ A + +F++ RG+ ++RQ + +++ Sbjct: 169 VGKRGRERLVPISAPARDALEQWV---VRWRPQLAPKHRMLFVNLRGAPITRQGVWLVLK 225 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G + PH+LRH+ + E GAD R++Q+ LGH ++ T YT + Sbjct: 226 QRASRVGLGDRVSPHVLRHSLAVHMVEAGADLRVVQEILGHASLATTELYTKVSEGHVDA 285 Query: 182 LWERNN 187 +++R + Sbjct: 286 VYQRAH 291 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 8/184 (4%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +V++++ A A G RD ++ + Y G+R+SEL++L + ++LN G + I Sbjct: 125 LSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLRVSELMNLSLEQVNLNAGWLQITGK 184 Query: 66 KNGFSTVHPLRFDEREAVERW-TQER----ANWKGADRTDAIFISRRGSRLSRQQAYRII 120 N V PL +A++ + T R A+ K + A+F++ +G ++RQ + +I Sbjct: 185 GNKTRLV-PLGEYASDALDDYLTHARGELVAHLKSGN-CQAVFLTTQGGYMTRQNFWYMI 242 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + +AG + PH LRHA L GAD R +Q LGH ++ T YT AR Sbjct: 243 KKYAKQAGIQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQIYTHVATARLQ 302 Query: 181 GLWE 184 L E Sbjct: 303 QLHE 306 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 2/153 (1%) Query: 28 DYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWT 87 D ++ LAY G+R++EL ++ + L L G IN+ K V P+ +A++R+ Sbjct: 144 DQAVLELAYASGLRLAELRNIRMEQLHLEVGFINVIG-KGNKERVVPVGSKAVQALQRYL 202 Query: 88 QERANWKGADRTDA-IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 + R+ A +F++ RG+ + ++ I+D +G PHMLRH+ L Sbjct: 203 ESGRPKLVTPRSPANVFLTMRGTPFAAVTLWKRIKDRVKRSGVARNVTPHMLRHSFATHL 262 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 E GAD R+IQ+ LGH NI T YT + +R Sbjct: 263 LEHGADLRVIQELLGHANISTTEIYTHVSGSRL 295 >UniRef50_C7PZV6 Integrase family protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZV6_CATAD Length = 354 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 6/166 (3%) Query: 10 KEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR-RLKNG 68 +E AM++A G RD ++ + G+R+SEL ++ +DL G +R R K G Sbjct: 169 EESAAMLEAAAQ--RGVRDEAVVAVLLYQGLRVSELCGINVEDLSSQRGHRVVRLRRKGG 226 Query: 69 FSTVHPLRFDEREAVERWTQERA---NWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 + ++ W ERA + + +F+ G+RL+R Q I+ Sbjct: 227 EEQDQAIAPPAAGCLDAWLAERARDSAFGAVPASGPVFVGPEGARLTRYQVEWIVESCAR 286 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 AG + PH LRHAC L + G R IQ Y+GH N T RY Sbjct: 287 AAGVEKKISPHSLRHACTTMLLDAGVPLRDIQVYMGHANSATTERY 332 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 2/162 (1%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G R+ ++ L Y G R+SE+ + ++L G I + K + PL A++ Sbjct: 130 GIRNKAILELLYATGARVSEVATISLNGINLEYGYIKCKG-KGSKERIVPLGKKASIAIQ 188 Query: 85 RW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + T R K + + +F+SR G L R+ + I+++ ++AG PH LRH+ Sbjct: 189 EYLTTVRPQIKDSQNSHYLFLSRTGRPLRRENIWLIVKNCALKAGITEAISPHKLRHSFA 248 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 L E GAD R +Q+ LGH +I T YT N + ++ Sbjct: 249 THLLENGADLRAVQEMLGHVSISTTQIYTHVNKQHLKAIHQK 290 >UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6T2_KANKD Length = 299 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 1/147 (0%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVER 85 RD ++ L Y G+R++EL + DL ++ + + N V P ++ + Sbjct: 131 VRDKAMMELLYSSGIRLAELSAMDIDDLSFSDQSLRVLGKGNKVREV-PFGNSSKKVLSL 189 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 W +ER N+ A+F+S++G+RL+ + + + G + G + HPH LRH+C Sbjct: 190 WLKERNNFAKNSDEKALFLSQQGNRLTNRAIQQRLAHWGKKLGLNDRLHPHKLRHSCATH 249 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYT 172 + E +D R +Q+ LGH +I T YT Sbjct: 250 VLESSSDLRAVQELLGHASISTTQIYT 276 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 5/169 (2%) Query: 7 LTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ EV ++ Q G G RD + L Y G+R SEL+ L D+ EG + + Sbjct: 121 LSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDLGDVFFAEGILRVMG- 179 Query: 66 KNGFSTVHPLRFD-EREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRDA 123 K + P+ +R ++ R +TD A+ ++ RG RLSRQ + I+R A Sbjct: 180 KGSRERIVPIGGSAQRVLLDYLENGRPKLAKPSKTDGAVILNARGGRLSRQALHTIVRTA 239 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 G G HPH LRH+ + E GAD R IQ+ LGH +I T Y Sbjct: 240 GATIGR-PDLHPHTLRHSFATHMLEGGADLRTIQEILGHSDISTTQIYV 287 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 14/187 (7%) Query: 7 LTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 LT EV ++ + C +T G RD ++ L Y GMR+SEL+ L DL L G + Sbjct: 110 LTVDEVTQVLNS-CDTSTVLGLRDKAMLELLYATGMRVSELITLKLSDLHLELGFLQTIG 168 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANW------KGADRTDAIFISRRGSRLSRQQAYR 118 K + P+ +A W Q + + ++ + +F++ RG+ +RQ ++ Sbjct: 169 -KGNKQRIIPIG----QAATNWVQHYLTYARVVLEQESNPVEYLFLNHRGNGFTRQGFWK 223 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 ++ EAG PH LRH+ + E GAD R++Q+ LGH +I T YT R Sbjct: 224 NLKKIVQEAGVHKDVSPHTLRHSFATHILEAGADLRIVQELLGHSDISTTQIYTHLTNER 283 Query: 179 FAGLWER 185 ++++ Sbjct: 284 MKEIYQQ 290 >UniRef50_B6IPE2 Tyrosine recombinase xerC n=11 Tax=Alphaproteobacteria RepID=XERC_RHOCS Length = 341 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL-KNGFSTVHPLRFDEREAV 83 G RD L L Y G+RISE + L+ DL G ++R L K G P+ REAV Sbjct: 153 GLRDRALFTLLYGCGLRISEAIGLNRSDLP--AGAASVRVLGKGGKQRDVPVLPAVREAV 210 Query: 84 ERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + W G R +F+ +G RLS A R +R G T PH LRH+ Sbjct: 211 AAYLAA-VPW-GGGRAAPLFVGAKGDRLSPDVARRQMRHLRALLGLPDSTTPHALRHSFA 268 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 L GAD R IQD LGH ++ T RYT +A ++E Sbjct: 269 THLLGGGADLRAIQDLLGHASLSTTQRYTDVDAEHLLSVYE 309 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 84/194 (43%), Gaps = 30/194 (15%) Query: 9 GKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNG 68 G+ + A A G G RD L+ L Y G RISE++ L D+DL GR+ R + Sbjct: 141 GRLLDAAGSADPDGPRGLRDRALLELLYATGARISEVVGLDVDDIDLGPGRLAGRSSTDP 200 Query: 69 FSTVHPLRFDEREAVERW----TQERANWKGA-------------------------DRT 99 P +V R +ER G+ Sbjct: 201 TDPTDPQVAPPITSVVRLHGKGAKERLVPVGSFALRALEAYLVRGRPVLAAAGRGAGPAR 260 Query: 100 DAIFISRRGSRLSRQQAYRIIRDAGIEAG-TVTQTHPHMLRHACGYELAERGADTRLIQD 158 A+F++ RG RLSRQ A++++ DA AG + PH LRH+ L E GAD R +Q+ Sbjct: 261 GALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHSFATHLLEGGADVRSVQE 320 Query: 159 YLGHRNIRHTVRYT 172 LGH ++ T YT Sbjct: 321 LLGHASVTTTQIYT 334 >UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia RepID=XERC_NATTJ Length = 299 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 6/185 (3%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +L+ +EV+ ++ A G RD ++ + Y G+R+ EL L Q+LDL G + + Sbjct: 111 FLSIEEVEMLINAPGDDPFGLRDKAILEVFYCSGIRLGELWGLDLQNLDLQTGYLKVTG- 169 Query: 66 KNGFSTVHPLRFDEREAVERW-----TQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 K + PL A+E + + K + DA+F+++ G+R+S++ R + Sbjct: 170 KGNIERLAPLGSFALAAIEDYLYNARPELLKKNKSVENCDALFLNKFGTRISQRSIRRRV 229 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + + + PH LRH+ L E GAD R +Q+ LGH NI T YT N AR Sbjct: 230 KKYVQQTASEHRVSPHSLRHSFATHLLEGGADLRAVQELLGHVNISTTQIYTHVNQARMT 289 Query: 181 GLWER 185 ++ + Sbjct: 290 EVYNK 294 >UniRef50_C8NZN0 Integrase/recombinase XerD n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZN0_ERYRH Length = 304 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 3/149 (2%) Query: 28 DYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWT 87 DY ++LL YR G+R+SE + L + + L++ + I N + PL D + + + Sbjct: 131 DYAILLLLYRCGLRVSECVHLEFSQVYLDQKWLRILGKGNKERMI-PLSIDAIDGLSEYI 189 Query: 88 QE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 R W T+ IFI+ +G +SRQ +I+ E G +T H LRH+ + Sbjct: 190 NIIRPQWM-IQPTEQIFINAKGKGISRQYIDSMIKSRCKEMGILTPISAHTLRHSFATAI 248 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASN 175 + G D R+IQ+ LGH++I T YT N Sbjct: 249 LDTGVDLRIIQELLGHQDISTTQIYTHVN 277 >UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GL18_9FUSO Length = 315 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 8/168 (4%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 L KEV+ ++ + + G RD +I G R+SE+L+L+ +D++ N+G I+ L Sbjct: 135 LNLKEVKTIIDNIGHTPEGMRDRLIIKFLIATGARVSEILNLNIKDVE-NQGYEFIKVLG 193 Query: 67 NG--FSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 G + V E E + + R KG++ + +F R R+ ++ ++ Sbjct: 194 KGSKYRIVPIYESLENEIKDYISNYRPKLKGSESSFKLFPDTR-----RENFWKRLKKTA 248 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +AG +PH+ RH+ L GAD R++Q+ LGH NI T YT Sbjct: 249 KDAGIEKNVYPHIFRHSVATVLLSNGADIRIVQEILGHANISTTEIYT 296 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 5/168 (2%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +LT E+Q ++ RD +I L Y G+RI EL+ L +++D + + Sbjct: 132 FLTENEMQMLLN---LPDLKPRDRAMIELFYSCGLRIEELVSLDLKNIDFISNVVTVTGK 188 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWK-GADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 +N V P+ A++ + +R N D +F+S R RL ++ A RI+ Sbjct: 189 RNKERIV-PVGDICLHAIKDYINKRRNLGLPYDIRSPVFLSDRAKRLGQRTARRILHRYF 247 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 ++AG + PH LRH + +RG D R +Q+ LGH+N+ T YT Sbjct: 248 VKAGFTKKVSPHTLRHTFATHILDRGCDLRSVQEMLGHKNLSSTQIYT 295 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 5/171 (2%) Query: 5 RYLTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + L+ EV+ ++ A+ R++ ++ L Y GMR+SEL+ L ++ G + I Sbjct: 170 KVLSSAEVEQLLAPPAPPASILALRNHAMLHLLYATGMRVSELVKLPVAAVN-QAGHLRI 228 Query: 63 RRLKNGFSTVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + P R+A+ + TQ R R+D +F++ RG+ ++R + ++I+R Sbjct: 229 LG-KGSKERLVPFGEAARQAMAVYITQARPRLLKKRRSDFLFVTGRGTAMTRLRFWQIVR 287 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + E G + PH+LRH+ L E GAD R +Q LGH +I T YT Sbjct: 288 KSARERGIAREISPHVLRHSFATHLLEHGADLRAVQVMLGHADIATTQIYT 338 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ EV ++++ + T G R+ L+ L Y G+R+SELL++ +D+ + + + I Sbjct: 112 LSVDEVISILEVIDKSTTLGLRNMALLELIYGSGLRVSELLNIKLKDIHMQQSYV-IVTG 170 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + P+ A+ + + + ++TD +FI+ +G LSR +++++ Sbjct: 171 KGSKERMVPISDMAIIAIRNYLVKARDDLIKEKTDYLFINNQGKTLSRVGFFKVLKKLAS 230 Query: 126 EAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 EA + PH LRH+ L E G D R +Q+ LGH +I T YT + +R ++ Sbjct: 231 EANLDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTHISQSRLKQVYN 290 Query: 185 R 185 + Sbjct: 291 K 291 >UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychrobacter RepID=Q1QE98_PSYCK Length = 349 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD + L Y G+R+ EL+ L D+DL + R+ + N V PL +A+ R+ Sbjct: 176 RDKAMFELLYSSGLRVGELVALDIVDVDLADLRVRVTGKGNKTRLV-PLGIKAADAIRRY 234 Query: 87 TQERANWKGADRTD-AIFISRR-GSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 R W ++ D A+FIS + G+RLS + + ++ A AG +PH+LRH Sbjct: 235 LPHRNLW--VEQMDQALFISEKLGTRLSTRAVQQRLKVAATRAGIAQNMYPHLLRHCFAS 292 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 + D R +Q+ LGH +I T YT + A+ +++R Sbjct: 293 HMLSGSGDLRAVQEMLGHSDISTTQIYTHVDFAKLTQVYDR 333 >UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXM2_DICNV Length = 297 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 10/187 (5%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 ++ +V+A++ A G RD ++ L Y G+R+SEL+ L + L+ G + I Sbjct: 112 MSESDVEALLSAPDVQTILGLRDRAMLELLYACGLRVSELVGLTLHQIALDVGYVQILG- 170 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQA-YRI---I 120 K + P E ++R+ QE R G +D +F+S+RG+ LSRQ YR+ + Sbjct: 171 KGDKERLVPFGEIAHEWLQRYIQEARPQLLGQKMSDYVFVSQRGAALSRQAFWYRLKVYV 230 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 G+++ ++ PH LRHA L GAD R IQ LGH ++ T YT R Sbjct: 231 CAVGLDSNKIS---PHTLRHAFASHLLAHGADLRSIQMLLGHSDLSTTQIYTHIADQRLK 287 Query: 181 GLWERNN 187 L+ +++ Sbjct: 288 SLFMKHH 294 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ EV ++ A A G RD ++ L Y G+R+SEL+ L D++L E R+ + R Sbjct: 130 LSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLNDVNL-ETRVLVARG 188 Query: 66 KNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P+ +AV+ + R R+ +F++ RG R++RQ +I+ Sbjct: 189 KGDKERIVPVGAPAADAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQGFAKILDRCA 248 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 AG + PH LRH+ L E GAD R +Q+ LGH ++ T YT + L++ Sbjct: 249 RRAGIRRRISPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHVDRTHVKRLYD 308 Query: 185 R 185 R Sbjct: 309 R 309 >UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related protein n=4 Tax=Thermoplasmatales RepID=Q9HIM5_THEAC Length = 283 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 7/179 (3%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLI-LLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 YL+ E + +++A ++ R Y ++ +LAY G+R+ EL +L D+DL E IN+R Sbjct: 104 YLSEDEAKRLIEA---ASSDTRMYAIVSVLAYT-GVRVGELCNLKISDVDLQESIINVRS 159 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + + + +A+ + R + + D +F+S R R R+IRD G Sbjct: 160 GKGDKDRIVIMAEECVKALGSYLDLRLSMDTDN--DYLFVSNRRVRFDTSTIERMIRDLG 217 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 +AG + PH+LRH + G D R IQ LGH ++ T YT N + ++ Sbjct: 218 KKAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLNDSALREMY 276 >UniRef50_B2A5E4 Integrase family protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5E4_NATTJ Length = 194 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%) Query: 5 RYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R++T KE+ + + + RD + +AYR G+R SE+ + D + + + Sbjct: 6 RFMTQKELDKLFRTIEKSKDKHWLRDITMFRIAYRCGLRASEVGLIQVSDFNPKMNELYV 65 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 RR KN + + +R D + A R+ ++ + +F S++ S +SRQ RI++ Sbjct: 66 RRNKNSLN--NTIRLDNKTA--RYLKKYIKSYQLKENEIMFKSQKRSPISRQNLDRIMKK 121 Query: 123 AGIEAGT--VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 +A VT H H+++H+ LAE G D + +Q YLGHRNI T+ Y Sbjct: 122 YCEKAKIKDVTNWHFHVMKHSIAVHLAETGLDVKELQHYLGHRNIASTLVY 172 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 3/180 (1%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 L+ +V ++ RD ++ Y G+R+SEL+++H D+D NE + + Sbjct: 108 LSIDQVFNLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTNEQTLKVLGKG 167 Query: 67 NGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLS-RQQAYRIIRDAGI 125 N F V PL EA++ W +R + +F++++G +L+ R YR+ + Sbjct: 168 NKFRIV-PLGRKAIEALDLWILQRNKLNKLVDDEFLFLNQQGKKLTARAIQYRL-KFWAQ 225 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 + HPH+LRH+ + + D R +Q+ LGH NI T YT + + ++++ Sbjct: 226 KNNIPENIHPHLLRHSFASHVLQSSQDLRAVQELLGHSNISTTQIYTHLDFQHLSKIYDQ 285 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 3/168 (1%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +EV + ++ G R+ +I + + G+R+SEL++L +L L+EG I + Sbjct: 117 LSTEEVDMIENSIDLSKPEGQRNKAIIEVLFSCGLRVSELVNLQLSNLYLDEGFIRVTGK 176 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWK-GADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 N V P+ + + W +R K D +F++RRG+ L+R +++ Sbjct: 177 GNKERLV-PISPKAIKELNLWFLDRNLMKIKPGEQDYVFLNRRGAHLTRTMILIMLKRQA 235 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 EAG PH LRH+ EL + GAD R IQ LGH +I T YT Sbjct: 236 QEAGIQKTISPHTLRHSFATELLKGGADLRAIQVMLGHESIGTTEIYT 283 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 3/168 (1%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT E++A++ T G R+ L+ Y G R+SE+ +L DL G I Sbjct: 117 LTATEIEAVLAVPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLHDELGLITTIG- 175 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADR-TDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P+ + ++ +E D+ + +F++ G R+SRQ ++++++ Sbjct: 176 KGQKQRIVPIGEMSLLYISKYFKESRPILLKDKESPYLFLNDHGHRISRQGIFKLVKEIA 235 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 I+AG PH LRH+ L E GAD R++Q+ LGH +I T YT Sbjct: 236 IKAGIDKDISPHTLRHSFATNLLENGADLRIVQELLGHSDISTTQIYT 283 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 16/174 (9%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDL-NE-----G 58 +YLT +E+ ++ ++ G RD LI L Y G+RISE L + +DL NE G Sbjct: 112 QYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEALGIKLSQIDLENEWLMPIG 171 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR 118 + N +RL PL +E + W +E TD I ++ G +SR A++ Sbjct: 172 KGNKQRLV-------PLGSKAKENLRAWIEEGRPLTHP-TTDNIILNAHGKPMSRMGAWK 223 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 I++ + Q PH RH+ E G D R++Q+ LGH +I T YT Sbjct: 224 IVQLHTMHLS--KQVSPHTFRHSFATHCLEAGMDLRVLQELLGHADISTTQIYT 275 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 3/175 (1%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT +E+ ++ A G A RD L+ L Y G+R+SEL L Q +DL G + + Sbjct: 128 LTEEEIARLLAAPTGGDARALRDRALLELFYSSGLRVSELAGLLLQQVDLEHGFLRVFG- 186 Query: 66 KNGFSTVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K V P+ EA+ + T R ++ + +F+++ G LSR + +++ Sbjct: 187 KGAKERVVPIGGKAIEALATYLTAGRPHFVRSRTGSQLFLNKNGGPLSRVMLWMLVKKYA 246 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 AG PH LRH+ L GAD R IQ+ LGH +I T YT+ + R Sbjct: 247 KRAGLTKNVKPHGLRHSFATHLLSGGADLRAIQEMLGHASISTTQIYTSVESQRL 301 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 6/189 (3%) Query: 1 MSKRRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 +S L K V +++++ G RD L+ + Y GMR+SE+++ + D +E Sbjct: 104 LSLPHVLDQKTVSNLLESIDIQDIPLGCRDRALLEMIYACGMRVSEIINCKLESFDKDEA 163 Query: 59 RINIRRLKNGFST-VHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQA 116 +R L G T + P+ +A++ + ++ R IF++ RG L+R++ Sbjct: 164 --FVRVLGKGNKTRLVPVGRSALDALQMYLEKGRPKLVRTGTKSHIFLTVRGRPLTRERI 221 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 +I+R+ AG PH+LRH+ L E GAD R+IQ+ LGH +I T YT Sbjct: 222 RQILRERARAAGLEQHVFPHILRHSFATHLLENGADLRIIQEMLGHADISTTQIYTHLEQ 281 Query: 177 ARFAGLWER 185 R + R Sbjct: 282 QRLNSIHHR 290 >UniRef50_B9L0I5 Tyrosine recombinase xerD n=2 Tax=Thermomicrobia (class) RepID=B9L0I5_THERP Length = 331 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 5/170 (2%) Query: 5 RYLTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R + KEV+ ++ A T G RD +++ G+R+SEL L +D+DL+ G + + Sbjct: 127 RAIGPKEVEQLIAAASSDRTPEGLRDRAMLITLATTGLRVSELTALDVRDVDLDRGELIV 186 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 RR NG V PL + EA+ + + R + A+F++ RGSRL+RQ + I++ Sbjct: 187 RR-PNGRERVVPLAREAIEALRDYLERGRPGFTTLKGEQALFLNHRGSRLTRQGFWLILK 245 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + AG + + PH LRH+ G D R +Q LGH + T Y Sbjct: 246 NYAAAAG-LPEVTPHTLRHSFAVRALVDGWDLRDLQRVLGHVSPATTQVY 294 >UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYI3_9BACT Length = 312 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 4/159 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+R++EL L+ D+DL + + + N + P+ A++ W Sbjct: 140 RDKAMLELTYSCGLRLAELASLNVFDIDLTDASLIVTGKGNKTRQL-PIGRQAITALKSW 198 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 Q+R K D +A+FI+ RG R+ + +R A + A HPHMLRH+ L Sbjct: 199 LQQRGQLKCHD-ANALFINHRGQRMGVRGIQ--MRMANMAATHGQHIHPHMLRHSFASHL 255 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 + D R +Q+ LGH NI T YT + A ++++ Sbjct: 256 LQSSGDLRAVQELLGHSNISTTQVYTHLDYQHLAKVYDK 294 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 3/170 (1%) Query: 17 QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLR 76 Q + G RD ++ L Y G+R++EL+ L+ +D+++N G I R N V P+ Sbjct: 122 QPLNTTPKGIRDKAMLELLYATGIRVTELISLNLEDVNVNLGYI--RCCNNTKERVIPIG 179 Query: 77 FDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHP 135 A++++ R + + ++F++ G RL+RQ ++II+ +A P Sbjct: 180 TLSLIALQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQGFWKIIKVYTKQAAIEKSITP 239 Query: 136 HMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 H LRH+ L E GAD + +Q+ LGH +I T Y + ++ + Sbjct: 240 HTLRHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQLTKHKIKDVYNK 289 >UniRef50_B1HMD1 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMD1_LYSSC Length = 632 Score = 75.5 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 6/162 (3%) Query: 10 KEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGF 69 KE A ++ +C R+ ++ L G RISE+ L+ D+DL + Sbjct: 460 KEEIAKVRQLCEKRNQLRNRVMVELLLTSGCRISEVNMLNKSDIDLENRTAQVLGKGKKI 519 Query: 70 STVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGT 129 VH F E A+ ER D A+FIS RG+RL +Q +I+ GI+A Sbjct: 520 REVH---FSETCAI---LLERLLESYIDEHPALFISERGTRLGIRQMQKIVEQVGIDAKI 573 Query: 130 VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + HPH RH EL +GAD I D LGH+ ++ T Y Sbjct: 574 KSSLHPHRFRHTFATELLTKGADLSFIADELGHKQLQTTKIY 615 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 LT +EV+ ++ + T RD + LL Y G+R+SEL +L D+D I +R K Sbjct: 100 LTREEVRKILSVIP--PTKKRDRLIFLLLYGAGLRVSELCNLKKSDVDFERSLIIVRGGK 157 Query: 67 NGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFIS---RRGSRLSRQQAYRIIRDA 123 V P+ E ++ + + R D ++ + + R +LS + + +++ Sbjct: 158 GAKDRVVPIPAFLLEGIKAYLETRD-----DDSEYLIVEDRRERKDKLSPKTVWYLLKKY 212 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 G AG + PHMLRH+ + E G D R IQ+ LGH N+ T YT Sbjct: 213 GDRAGI--RVTPHMLRHSFATHMLENGVDIRAIQELLGHSNLSTTQIYTKVTVEHLRKAQ 270 Query: 184 ERNNLI 189 E+ LI Sbjct: 271 EKARLI 276 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 4/156 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPL--RFDEREAVE 84 R+ ++ L Y GMRISELL + DL+L E R+ + K P DE A + Sbjct: 150 RNKLMMELLYATGMRISELLSISLHDLNLTE-RVILVHGKGSKQRYVPYVDTLDELFA-K 207 Query: 85 RWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 Q R +++ +F++ RG R+SR ++I+R A +EA + PH RH+ Sbjct: 208 YLKQSRPILLKLKQSELLFLNNRGERMSRMGFWKILRKAVLEANIKKEVTPHTFRHSFAT 267 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 L E G + R++Q LGH +I T YT + R Sbjct: 268 HLLEGGVNLRIVQALLGHSSIDTTQIYTHIDMKRLV 303 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 2/161 (1%) Query: 13 QAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTV 72 Q + Q + RD ++ L Y G+R+SEL+ L ++ G + ++ N V Sbjct: 119 QLLSQPGVRTDSAIRDTAMLELMYATGLRVSELISLTTGSINWQVGYLVVQGKGNKERIV 178 Query: 73 HPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVT 131 P+ E V R+ E R +T+ +F+++ G ++RQ ++++R ++AG Sbjct: 179 -PIGQVAYEHVRRYFDEVRPKCIRGAQTNVLFLNKSGQGMTRQGFWKLVRKYAVKAGLQK 237 Query: 132 QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + HPH RH+ L E GAD R +Q LGH +I T YT Sbjct: 238 KVHPHTFRHSFASHLLEGGADLRSVQMMLGHADISTTQIYT 278 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 6/169 (3%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +T ++ A++ A + G RD L+ + Y G+R++E + L D+DL+ G +IR + Sbjct: 110 ITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDLHRG--SIRTI 167 Query: 66 KNGFST-VHPLRFDEREAVERWTQERANWKGADRT-DAIFISRRGSRLSRQQAYRIIRDA 123 G + PL + VER+ E ++ D +F+S++ S +SRQ A+ I+++ Sbjct: 168 GKGDKLRLVPLGQEAAYWVERYCNESRPLLLKNKICDEVFVSQKRSGISRQLAWMIVKEY 227 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 EA + PH LRHA L G D R +Q LGH +I T YT Sbjct: 228 A-EAAGIASLSPHGLRHAFATHLVNHGVDLRSVQMMLGHSDINTTQIYT 275 >UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium RepID=Q6A7J6_PROAC Length = 315 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 1/155 (0%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 GARD ++ + Y G+R+ EL L D+D + + + + TV P+ A++ Sbjct: 151 GARDAAILEVLYGGGLRVGELCGLDLGDVDRSRRTVKVTGKGDKERTV-PMGAPALRAID 209 Query: 85 RWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 W R W G A+F+ RG R+ ++ R++ PH LRHA Sbjct: 210 TWLPRREEWVGPHSGQALFLGARGRRIDQRVVRRVVHTDLRAEPDSPDLGPHGLRHAMAT 269 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 L E GAD R +QD LGH ++ T YT + R Sbjct: 270 HLLEGGADLRTVQDILGHESLATTQIYTHVSTERL 304 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 4/169 (2%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ ++V ++++A RD ++ L Y G+R++EL+ L +++ L +G + + Sbjct: 135 LSEEQVDSLLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVRVIG- 193 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K G + P+ + + +E + ++ R G + +D +F S+R +++RQ + I+ Sbjct: 194 KGGKERLVPMGENAVDWIETFIEQGRPQLLGDNSSDVVFPSKRAKQMTRQTFWYRIKHYS 253 Query: 125 IEAGTVTQT-HPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + AG T+ PH+LRHA L GAD R++Q LGH ++ T YT Sbjct: 254 VIAGIDTELLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYT 302 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 2/162 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+R+SEL+ L + + L +G + I K G + P+ VE + Sbjct: 137 RDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVRIIG-KGGKERLVPMGEMAITEVEHY 195 Query: 87 -TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 T R G ++D +F S+R ++RQ + I+ AG T+ PH LRHA Sbjct: 196 LTSARHELLGHIQSDVVFPSKRSQMMTRQTFWHRIKLYASRAGIETELSPHTLRHAFATH 255 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNN 187 L GAD R++Q LGH ++ T YT AR L ++++ Sbjct: 256 LLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHH 297 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 36/197 (18%) Query: 6 YLTGKEVQAMMQAVCYGATGA---RDYCLILLAYRHGMRISELLDLHYQDLDLNE----- 57 +L+ EV A ++A R+ ++ + Y G+R+SEL L +D + Sbjct: 111 FLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAVDFDNELLRV 170 Query: 58 ------------GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFIS 105 G++ +R L+ + V PL ++ R+ +F+S Sbjct: 171 VGKGSKTRIVPIGKVALRTLRRYLADVRPLLAEKNP----------------RSPYVFLS 214 Query: 106 RRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNI 165 + G L+R+ + +++ A AG HPH LRH+ L GAD R+IQ+ LGH +I Sbjct: 215 KSGRPLNREWIWNVVKVAAARAGIHKNIHPHTLRHSFASHLLAHGADLRVIQEMLGHADI 274 Query: 166 RHTVRYTASNAARFAGL 182 T YT ++ R A + Sbjct: 275 STTEIYTHIDSNRLAAI 291 >UniRef50_B5JZ18 Phage integrase n=14 Tax=Rhodobacteraceae RepID=B5JZ18_9RHOB Length = 320 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 7/180 (3%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ KE++ ++ A + ++ LAY GMR E++ L D+D ++ I I + Sbjct: 125 VLSKKEIKRILAM----APSLKARVMLSLAYGCGMRAGEVVRLKVGDIDSDQEIIRIVQS 180 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDA---IFISRRGSRLSRQQAYRIIRD 122 K + L D + W +ER + D +F S RG LS +Q R+ ++ Sbjct: 181 KGRKDRIVMLPVDILSLLRDWWKERPTGQDKDVPAPERVLFPSYRGKHLSARQISRLFKE 240 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 EAG H LRH+ L ERG D R+IQ LGH + T RY + A + Sbjct: 241 TAREAGITKPVTLHTLRHSFATHLLERGVDIRVIQALLGHSKLTTTARYASVATGMIAAV 300 >UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betaproteobacteria RepID=Q0AFS1_NITEC Length = 321 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 RD + L Y G+R++EL L D+D G + + N V P+ A++ Sbjct: 151 ATRDLAIFELFYSSGLRLTELTQLQPTDIDFTGGTVRVTGKGNKTRIV-PVGELALRALQ 209 Query: 85 RWTQERANWKGADRTDAIFISRRGSRL-SRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 W R+ W T A+F+S+RG R+ R AYR+ + A ++ ++ HPH LRH+ Sbjct: 210 AWLPLRSAWLIPGET-ALFLSQRGRRIHPRTIAYRLHQRAQLQ-NLDSRVHPHTLRHSFA 267 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 L + D R +Q+ LGH +IR T YT + A ++++ Sbjct: 268 SHLLQSSGDLRAVQEMLGHSSIRSTQVYTHLDFQHLAKIYDQ 309 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 3/181 (1%) Query: 5 RYLTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + L+ EVQ ++ Q G RD L+ L Y G+R SE +D+ +LD+++G + Sbjct: 127 KVLSRDEVQHLLSQPRGTGPAALRDRALLELMYACGLRASEAVDMQLDELDVDDGILRAN 186 Query: 64 RLKNGFSTVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 N V P+ +A+ + T+ R G +F+++RG L+RQ Y+I++ Sbjct: 187 GKGNKERLV-PIGSKALDALRHYLTRGRPQMVGLREEKRVFVNQRGHGLTRQGLYKIVQR 245 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 AG + PH LRH L G D R +Q+ LGH +I T YT +A R + Sbjct: 246 HARTAGLGDKMSPHTLRHTFATHLLAGGCDLRSLQEMLGHADIATTQIYTHLSAERLRDV 305 Query: 183 W 183 + Sbjct: 306 Y 306 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 2/167 (1%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +E++ ++ + GAR+ +I + Y G+R++EL++L +L L+ G + I Sbjct: 114 LSLQEIEDLLAVIDLSTPEGARNRAMIEVLYSSGLRVTELIELKISNLYLDIGFLRIIGK 173 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWK-GADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 N V R R + R+N + D +F++RRG+++SR + II++ Sbjct: 174 ANKERFVPIGREAARYLISYIENIRSNVPVKPNNEDFVFLNRRGTKISRVMVFMIIKEVA 233 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + A PH RH+ L GA+ + +Q+ LGH NI T Y Sbjct: 234 LLADIKKNISPHTFRHSFATHLILGGANIKAVQEMLGHENITTTEIY 280 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 5/169 (2%) Query: 7 LTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 LT +EV+ ++ G T G RD ++ + Y GM+++ELL+L D++L I R Sbjct: 109 LTIEEVEKLLMGPD-GNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINLKLSYIKCRG 167 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 +KN + P+ + +E + + R D +F + +G +++RQ ++II+ Sbjct: 168 IKNK-ERIIPMGSYAVKCLEIYLKVRTKL-NVQNIDYLFFNLQGDKMTRQGFWKIIKQYA 225 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 E+G + + + LRH+ L + GAD + IQ+ LGH ++ T Y+ Sbjct: 226 QESGIKKKINAYTLRHSFAVHLLQNGADIKTIQELLGHSDMATTQIYSG 274 >UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FAZ0_SORC5 Length = 358 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 6/156 (3%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG-RINIRRLKNGFST-VHPLRFDER 80 A G RD ++ Y G+R+SEL L +D R +R + G + PL Sbjct: 179 AEGLRDRAMLETLYGAGLRVSELCGLDLTHVDRRPADRAAVRVVGKGDKERIVPLGSHAL 238 Query: 81 EAVERWTQERANWK----GADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPH 136 A+ER+ + R GA A+F+SRRG+R+ ++ +++ G HPH Sbjct: 239 AAIERYLERRDELADPTTGARDPRALFLSRRGARIGVRRVQALVQRYGALGAGRADLHPH 298 Query: 137 MLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 LRH C L + GAD R IQ LGH ++ T RYT Sbjct: 299 ALRHTCATHLLDGGADLRAIQKLLGHASLATTQRYT 334 >UniRef50_Q2JAI1 Phage integrase n=2 Tax=Actinomycetales RepID=Q2JAI1_FRASC Length = 322 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 7/178 (3%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN--EGRINI 62 R LT E + +++A RD +I L Y G+R +EL+ L D+ + G +++ Sbjct: 134 RALTDDEARRVLRA-AERLPSLRDRTIIELLYNTGVRCAELVALDLDDVPVTARTGAVHV 192 Query: 63 RRLKN---GFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 R K G P R A+ W RA W A+ A+F++R G RLS + ++ Sbjct: 193 RAGKGRDGGKPRTIPANPRARRALTDWKPARAAWPNAEADPALFLNRYGRRLSTRTVDQV 252 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 + D G G + PH+LRH + RGAD L+ + LGH T YT A Sbjct: 253 VADLGRSVG-IDDLTPHVLRHTFATAMLRRGADLVLVAELLGHARTDTTRVYTKPTEA 309 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 12/199 (6%) Query: 5 RYLTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + ++ +EV ++ A T G RD ++ + YR G+R+SEL+ L+ D++L+E ++ Sbjct: 116 KAISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDDINLDES--HL 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANW--KGADRTDAIFISRRGSRLSRQQAYRII 120 + + G + PL + ++ + + +G D A+F++ RG RL+RQ + I+ Sbjct: 174 KCIGRGKTRKVPLSQPAVDVLKLYLERSRPLLVRGQDE-QALFVNHRGQRLTRQGFWLIL 232 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY----TASNA 176 + EAG + PH LRH+ + + G D R +Q++LGH +I T Y + S++ Sbjct: 233 KAYASEAG-IKGITPHTLRHSFAAHMIDGGIDLRQVQEWLGHASITTTQVYRQIKSNSHS 291 Query: 177 ARFAGLWERNNLINEKLKR 195 + + R I E++ + Sbjct: 292 EKIIDIKSREERIPEEVAK 310 >UniRef50_Q5LEL4 Putative tyrosine recombinase n=2 Tax=Bacteroides fragilis RepID=Q5LEL4_BACFN Length = 294 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 92/175 (52%), Gaps = 27/175 (15%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR-- 64 L+ +E+++++ A R +C+ L Y G+RISELLDL D++++ I +R+ Sbjct: 112 LSKEEIKSILDAT---GPDIRLFCMFSLLYSAGLRISELLDLKPHDINVSRSLIRVRQGK 168 Query: 65 -LKNGFSTV-HPL-----RFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 K+ ++ + PL + + + W ER +KG T++I +S++ Sbjct: 169 GRKDRYTLLSKPLVRKLTEYTKLYKPQEWLFER--YKGEPFTESI-VSKK---------- 215 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +++A EAG + +PH+LRH+ L E+G D +++++ LGH ++ T Y Sbjct: 216 --LKEAAKEAGITKRVYPHLLRHSFATHLIEQGTDLKIVKELLGHNQLKTTEMYV 268 >UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium RepID=D2Q578_9BIFI Length = 306 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 A G R+ ++ + Y G+R++EL+ L D+ + + + K V P ++ Sbjct: 140 AVGLRNAAMLEVLYATGIRVAELVGLDVHDVAFDNRTMKVTG-KGNKQRVVPFGVPAEQS 198 Query: 83 VERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHA 141 + RW ++ R A DA+F+ +G+R+ ++ +++ + AG V PH LRH+ Sbjct: 199 IRRWLEDGRPRLVRARSADALFLGAQGNRIDQRVVRQVVHECAQRAG-VPDISPHALRHS 257 Query: 142 CGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 L + GAD R +Q+ LGH +++ T RYT Sbjct: 258 AATHLLDGGADLRQVQELLGHSSLKTTQRYT 288 >UniRef50_Q30R56 Tyrosine recombinase XerD subunit n=5 Tax=Epsilonproteobacteria RepID=Q30R56_SULDN Length = 278 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 19/171 (11%) Query: 5 RYLTGKEVQ-AMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR-INI 62 ++L+ +++Q A+ Q G RDY +I+ Y G RISE L L +D+ EG ++I Sbjct: 99 KFLSYQQIQNALSQVDRSSVLGLRDYAMIIFLYATGARISECLALRREDI---EGEWLHI 155 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R K + P+ F + AV+ + E K + ++ + +G +LSR AY+I + Sbjct: 156 RHAKGEKERIVPIAFVAKTAVDAYMNELKKTK-----EYVWSNYKGEKLSRISAYKITQK 210 Query: 123 -AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 G+ PH+LRH+ L GAD R++Q+ LGH ++ T YT Sbjct: 211 YLGVS--------PHVLRHSYATALIAGGADLRVVQELLGHSSLLTTQIYT 253 >UniRef50_C3Q7K5 Tyrosine type site-specific recombinase n=7 Tax=Bacteroidales RepID=C3Q7K5_9BACE Length = 376 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 92/175 (52%), Gaps = 27/175 (15%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR-- 64 L+ +E+++++ A R +C+ L Y G+RISELLDL D++++ I +R+ Sbjct: 194 LSKEEIKSILDAT---GPDIRLFCMFSLLYSAGLRISELLDLKPHDINVSRSLIRVRQGK 250 Query: 65 -LKNGFSTV-HPL-----RFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 K+ ++ + PL + + + W ER +KG T++I +S++ Sbjct: 251 GRKDRYTLLSKPLVRKLTEYTKLYKPQEWLFER--YKGEPFTESI-VSKK---------- 297 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +++A EAG + +PH+LRH+ L E+G D +++++ LGH ++ T Y Sbjct: 298 --LKEAAKEAGITKRVYPHLLRHSFATHLIEQGTDLKIVKELLGHNQLKTTEMYV 350 >UniRef50_C0GUW3 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUW3_9DELT Length = 414 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 16/173 (9%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 R+LT E + ++ +C+ + D LI L G R E+ L +QD+D ++G + R Sbjct: 210 RFLTHSEAEILLDVLCFSSQNTHDIALIAL--HCGPRAGEIFSLTWQDIDFSQGLVTFRD 267 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDA-IFISRRGSRLSR-QQAY-RIIR 121 KN + P+ R+ +ER + DR+ A +F R G R + +A+ R I+ Sbjct: 268 TKNKYVRHIPITKRVRKMLER--------RSDDRSSALVFPDRNGGRRKKVSKAFERTIK 319 Query: 122 DAGIEAGTVTQTHP---HMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + G G H LRH C L G +++YLGH+ I T RY Sbjct: 320 ELGWNKGIDDPRQKVVFHTLRHTCASWLVMAGVPLYTVKEYLGHKQISQTERY 372 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 8/152 (5%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 T ARD ++ L Y G+R+SEL L DLD G + ++ K G + P+ EA Sbjct: 143 PTFARDTAILELLYSSGLRVSELTGLAVADLDRAAGMVRVQG-KGGKERIVPVGSAALEA 201 Query: 83 VERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR--DAGIEAGTVTQTHPHMLRH 140 +E++ R AD +F+ RG+R++R+ ++++ +GI A PH LRH Sbjct: 202 LEQYLAGRGQL--ADDA-PLFLGCRGARINRRTVAQLVKRWASGIPA--FRSISPHTLRH 256 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + E GAD R IQ+ LGH ++ T +YT Sbjct: 257 TFATHMLEGGADLRSIQELLGHSSLSTTQKYT 288 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 7/172 (4%) Query: 7 LTGKEVQAMMQAVCYGAT----GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 LT ++V +++A + RD +I L Y GMRISE L+L +D N + + Sbjct: 140 LTVEQVNRLIEACPVNESSNPIALRDRAVIELLYGTGMRISEALNLDIDSIDRNHAYVRV 199 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIR 121 K + P+ A++ W R R+D A+F++ RG+RL RQ ++ + Sbjct: 200 VG-KGRKERLVPIGAPALHAIDAWLV-RGRPSMVKRSDKALFLNARGNRLGRQSVWKFLH 257 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 A G PH LRH+ L + GAD R +Q+ LGH ++ T YTA Sbjct: 258 AAAERCGLGDSVGPHTLRHSYATHLLQGGADIRAVQELLGHASVTTTQIYTA 309 >UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUW8_9GAMM Length = 308 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 2/159 (1%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD ++ Y G+R+SEL+ L LDL G + + K + P+ E + Sbjct: 143 GLRDAAMLETLYATGLRVSELVGLLCSQLDLEAG-VVLTLGKGSKERLIPVGEVALETLH 201 Query: 85 RWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 R+ +E R G ++ A+F++ RG +SRQ+ ++ I+ +AG + PH LRHA Sbjct: 202 RYLREARGALLGHKQSPALFLTVRGEAMSRQRFWQTIKAHATKAGIRSAFSPHSLRHAFA 261 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 L + GAD R +Q LGH + T YT AR L Sbjct: 262 THLLDHGADLRSVQLMLGHAQLNTTEIYTHIAQARLQNL 300 >UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteriaceae RepID=XERC_BIFLI Length = 355 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 10/158 (6%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 A R+ ++ L Y G+R++EL+ + D+D + I + K V P + A Sbjct: 182 AESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTG-KGNKQRVVPFGLPAQRA 240 Query: 83 VERWTQERANWKGADRTDAI--------FISRRGSRLSRQQAYRIIRDAGIEAGTVTQTH 134 +E W ++ TDA+ F+ RG R+ ++ A I+ A EAG V Sbjct: 241 LETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAG-VPDIS 299 Query: 135 PHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 PH LRH+ + + GAD R +Q+ LGH +++ T RYT Sbjct: 300 PHALRHSAATHILDGGADLREVQEMLGHSSLKTTQRYT 337 >UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE1_9ACTO Length = 303 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 17 QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFST-VHPL 75 +A GA+ R++ ++ L Y G+R+SE+ L L N + +R + G V P Sbjct: 131 EAAAGGASQIRNWAILELTYACGLRVSEVCALDISSL--NRDALTVRVVGKGNKERVVPY 188 Query: 76 RFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTH 134 +A++ W + R G +A+F+ +G R+ + ++ AG V Sbjct: 189 GPPAADALDHWLVRGRPQLAGERSGNALFLGDKGGRIDPRIVRSMVHKTAARAG-VHDIA 247 Query: 135 PHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 PH LRH+ L + GAD R +Q+ LGH ++ T RYT + AR + +++R Sbjct: 248 PHGLRHSTATHLLQGGADLRAVQEMLGHSSLSTTQRYTHVDTARLSAIYQR 298 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 2/167 (1%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 LT +E+ ++ R ++ L Y G+R+SEL+ L + ++L + + + K Sbjct: 108 LTKEEISRLLSFPPKTFAEIRTLTILELFYACGLRVSELVSLRIESVNLKDKWV-LAYGK 166 Query: 67 NGFSTVHPLRFDEREAVERWTQERANW-KGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 P+ + +E + ER + KG + IFI++ G ++SR ++ + D G Sbjct: 167 GAKQRFIPIHDRAVKVLEIYLSEREKYLKGKESASEIFINKNGKKISRMSVWKDVNDLGR 226 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 AG HPH+ RH L GAD R +Q+ LGH +++ T YT Sbjct: 227 LAGIERSLHPHLFRHTFATHLLIGGADLRSLQEMLGHADLQTTQIYT 273 >UniRef50_B0MSP3 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSP3_9BACT Length = 309 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 4/162 (2%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVER 85 R+ ++LL Y G+R++EL+ + D + + +R K + P+ RE + Sbjct: 134 VRNSLIVLLFYSCGLRLAELVGIDRDDFSGDYTALKVRG-KGDKERIVPILPPVREKILH 192 Query: 86 WTQERANWKGA--DRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + E + +G + A+F++++G R+SR YR ++ + G + PH+LRH Sbjct: 193 YLDE-IDRQGICISKEKALFLNQQGKRISRSTVYRTVQSQLRQGGVQGKKSPHVLRHTFA 251 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 EL GAD R IQ+ LGH +++ T YT ++ A+ ++ + Sbjct: 252 TELLNNGADMRAIQELLGHASLQATQVYTHNSIAKLQKIYSK 293 >UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S5H6_PROA2 Length = 335 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 6/167 (3%) Query: 22 GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDERE 81 G T ARD L+ + Y G+RISE++ L Y++++L + + + K G + PL R Sbjct: 163 GFTYARDRALLEVLYGCGLRISEVIGLQYENVNLQDSLLRVSG-KGGKQRIVPLGGPART 221 Query: 82 AVERWTQERANW---KGADRTDA--IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPH 136 A+ + + R N+ K + DA +F++++G R+ R+ R + +PH Sbjct: 222 ALRNYFEVRRNFFRMKNEESPDASYVFVTKKGRRIYPVLVQRVTRKYLSAVTEIKYKNPH 281 Query: 137 MLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 +LRH+ + GAD + + + LGH N+ T YT R ++ Sbjct: 282 VLRHSFATHMLNSGADLKSVSEMLGHTNLTTTEIYTHVTFGRIKEVY 328 >UniRef50_Q023B8 Phage integrase family protein n=8 Tax=Bacteria RepID=Q023B8_SOLUE Length = 336 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 15/178 (8%) Query: 6 YLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 YL +E +A++ A+ + G RD+ L+L Y G R+SE L + DL L R +R Sbjct: 128 YLEPEEARAVIAAIDRRSRNGERDHALLLFLYNTGARVSEALAIRASDLQLERPR-QVRL 186 Query: 65 LKNGFST-VHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQ-QAY---RI 119 L G + PL + A+ R R+ D++F + G+ L+R AY + Sbjct: 187 LGKGRKERICPLWPETASALHRIIPVRSG------EDSLFRNTLGALLTRDGVAYLLRKY 240 Query: 120 IRDAGIEAGTVTQ--THPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 +R A A ++ + PH++RH+C L + G D +I+DYLGH ++ T RY +N Sbjct: 241 VRSAAQHAPSLRKRRVTPHVMRHSCAVALLQAGIDVSVIRDYLGHASVATTSRYITTN 298 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 11/166 (6%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ Y G+R+SEL L+ DLD + I N V P A++RW Sbjct: 161 RDLAMVEFMYGTGVRVSELCRLNIGDLDFARQTVTILGKGNKQRVV-PFGESAAHALKRW 219 Query: 87 -----TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG--IEAGTVTQTHPHMLR 139 AN D +A+F+ +RG R+ +Q ++ A + G V+ PH LR Sbjct: 220 IDIGRPAIAANGHHKDADEAVFLGKRGGRIDPRQVRTVVHQATSTVSGGDVS---PHALR 276 Query: 140 HACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 H+ ++ E GAD R++Q+ LGH ++ T YT ++ R ++ + Sbjct: 277 HSAATDVLEGGADLRVVQEMLGHASLATTQIYTHVDSERLKAVFNQ 322 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 6/162 (3%) Query: 24 TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAV 83 +G RD ++ Y GMR+SEL+ ++ D+D + G + +R K + P+ A+ Sbjct: 138 SGLRDKAIMETLYSTGMRVSELVGINIADIDFHSGIVKVRG-KGSKERILPVGNHALNAI 196 Query: 84 ERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + + ++R AD +A+F+++ RL+ + R+I +A + PH RH+ Sbjct: 197 QLYLEKRK----AD-NEALFLNKFHGRLTERSVARMIEKYMKKAAMHLRVSPHTFRHSFA 251 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 L + GAD R +Q++LGH ++ T YT R ++++ Sbjct: 252 THLLDNGADLRAVQEFLGHSSLSTTQIYTHVTTERLKQVYDK 293 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 2/154 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ + Y G+R+SEL L D+D + + + N TV P A+ W Sbjct: 137 RDRLVVEMLYATGIRVSELCGLDVDDVDTSRRLLRVLGKGNKQRTV-PYGEPAHAALTAW 195 Query: 87 TQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 E R AD A+ + RG RL +QA ++ G PH LRH+ Sbjct: 196 LHEGRPALATADSGPALLLGARGKRLDPRQARTVVHQTVSAVGGAPDIGPHGLRHSAATH 255 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 L E GAD R++Q+ LGH ++ T YT AR Sbjct: 256 LLEGGADLRVVQELLGHSSLATTQLYTHVTVARL 289 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+R+SEL++L+ +++ G I +G P ++A++ + Sbjct: 132 RDKAMLELLYATGIRVSELMNLNLHHINMTIGFITCS--DSGRERTIPFGRVAKKALDDY 189 Query: 87 TQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 + R +D +F++ G ++SRQ ++II+ G +AG T PH LRH+ Sbjct: 190 LKNSRPELTKKKESDWLFVNCSGGQMSRQGFWKIIKYYGEKAGIQTDITPHTLRHSFAAH 249 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTA 173 L GAD + +Q LGH ++ T Y A Sbjct: 250 LISSGADMKAVQQILGHSDMATTQMYAA 277 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 5/182 (2%) Query: 7 LTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +EV +M Q G RD ++ L Y G+R+SELL L +DL+ G + R + Sbjct: 112 LSIEEVDKLMEQPNPVVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLNPTAGFL--RCM 169 Query: 66 KNGFST-VHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRDA 123 G + P+ + V+R+ N + + +F++ RG LSRQ ++I+ + Sbjct: 170 GKGRKERIIPVNQTSIDWVQRYLARVRNSLVKNPLERTLFLNARGRPLSRQGFFKILGNY 229 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 +A + PH LRH+ L E GAD R +Q+ LGH +I T YT +R ++ Sbjct: 230 VEKAELEKEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHLTKSRLREVY 289 Query: 184 ER 185 ++ Sbjct: 290 QQ 291 >UniRef50_B2A8Q1 Integrase family protein n=2 Tax=Firmicutes RepID=B2A8Q1_NATTJ Length = 187 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 8/151 (5%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGR----INIRRLKNGFSTVHPLRFDEREA 82 RDYCL +L G+RIS+LL+L DL G+ + ++ K G + L R A Sbjct: 26 RDYCLFVLGINTGLRISDLLELKVSDLVDENGKPKKNLELKEKKTGKNKQMILNEKARSA 85 Query: 83 VERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHAC 142 + + Q+ D+IF S++G +SR+ AYR+I +A G + H LR Sbjct: 86 IREYVQDSK----LSLNDSIFKSQKGGPISREHAYRVINEAAKAVGIKERVGTHTLRKTF 141 Query: 143 GYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 GY G D LIQ+ H T+RY Sbjct: 142 GYHAYINGVDISLIQNIFNHSAPSVTLRYIG 172 >UniRef50_C9M9N6 Tyrosine recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9N6_9BACT Length = 308 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%) Query: 7 LTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 L+ E+ ++++ C G + RD ++ + G+R SE+ L +D++ +++R Sbjct: 114 LSDGEIDRLLES-CSGESWMDVRDRTILQILADCGLRASEICSLTLASVDMDTRFLHVRG 172 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 N +V P + + +W RA+ G R+ +F SR G RL+R +R+IR Sbjct: 173 KGNKDRSV-PFGASVADWLTKWLAVRADGHPTGGARS-FLFASRTGDRLTRIDLWRLIRR 230 Query: 123 AGIEAGTV-TQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 G AG + HPH+LRH+ L RG D R +Q++LGH +I T +YT Sbjct: 231 RGERAGVAKARLHPHVLRHSVATRLLRRGMDLRTLQEFLGHSSIGTTEKYT 281 >UniRef50_A5N3B5 Conserved protein n=3 Tax=Clostridiales RepID=A5N3B5_CLOK5 Length = 199 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 19/200 (9%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 +K +YLT +E ++ + + Y + RD + +AYR G+R+SE+ L QD + ++G Sbjct: 7 TKIKYLTQQEAYSLFKTIENTYTSHSLRDLVIFRIAYRCGLRVSEIALLKMQDYNASKGE 66 Query: 60 INIRRLKNGFSTVHPLRFDEREA--VERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 + RRLK S + LR D + ++++ E + +F S++ + +SRQ Sbjct: 67 LYCRRLKG--SNNNTLRLDSKTKYILDKYIVEN---NITSTSQVLFSSQKNNPISRQTLD 121 Query: 118 RIIRD----AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT---VR 170 +++ AGIE ++ H H L+H LAE D + +Q +LGH+++ +T + Sbjct: 122 YLMKKYCSMAGIEDK--SKHHFHALKHTTAVHLAESDMDIKELQWWLGHKSVSNTEIYFQ 179 Query: 171 YTASNAAR-FAGLWERNNLI 189 +T R +A L E++ ++ Sbjct: 180 FTTKQQDRMYAKLDEKSEMV 199 >UniRef50_A3M0R9 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M0R9_ACIBT Length = 310 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 4/149 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD LI +AY G+R+ E+ L +++++ ++ + K + + PL EA W Sbjct: 137 RDLALIEIAYSCGLRLEEIHSLQIENVEVKRKQVRVTG-KGNKTRIIPLGSKAIEAYLEW 195 Query: 87 T---QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 +E N + + +F++ G++LSR Q + I++A AG Q++PHMLRH+ Sbjct: 196 LPLREEIMNKDTNQKHNYVFVTTTGAQLSRVQINKRIKNAFKLAGYPIQSNPHMLRHSFA 255 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYT 172 L R IQ+ LGH N+ T YT Sbjct: 256 THLINNSVGIREIQEMLGHSNLNTTQIYT 284 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 98/190 (51%), Gaps = 4/190 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M + L+ EV + +A G RD ++ + Y GMR+SELL L ++L Sbjct: 107 MVLPKVLSVDEVNRLFEAPDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHY 166 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERW-TQERANWKGADRT-DAIFISRRGSRLSRQQAY 117 + I K + PL E ++ + ++ R ++ +R D +F++ RG+ ++RQ+ + Sbjct: 167 V-IAYGKGAKERLIPLGHYAIEYLKEYLSRVRPHFVKENRPCDDLFLTIRGTGMTRQRFW 225 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 ++I++ G++ PH+LRH+ + + GAD R +Q+ LGH +I T YT Sbjct: 226 QLIKNYGLKVHIAKSLTPHILRHSFATHMLDNGADLRTVQELLGHSDISTTQIYTHLTNH 285 Query: 178 RFAGLWERNN 187 R ++++++ Sbjct: 286 RLKAIYDKSH 295 >UniRef50_B7KE90 Integrase family protein n=3 Tax=Cyanothece sp. PCC 7424 RepID=B7KE90_CYAP7 Length = 294 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDL-DLNEGRINIR 63 R L+ EV +++ RD ++ L Y GMR+SE++ L+++DL N G + I Sbjct: 123 RMLSETEVTTLIEK---ANQNQRDRIILKLMYVCGMRVSEVVGLNWRDLVPNNNGGLAIV 179 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K G + V + E+ ++ + + DA+FISR+ +R+SR+ + +I+ Sbjct: 180 LGKGGKTRV--VLIPEKLWLDIQQLPKTD-------DAVFISRKKNRISRKTVHYMIKQY 230 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 +AG PH LRH+ ERG + L+Q LGH N+ T RY Sbjct: 231 AKQAGINGNVSPHWLRHSHATHSIERGCNLHLLQQSLGHSNLSITSRY 278 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 3/148 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 R+ LI L Y GMRI E+ +L + +D N ++I K + P +++++ Sbjct: 137 RNSALIELLYATGMRIFEITNLTFSQIDFNSQIVDITG-KGKKQRIIPFGKPALASLKQY 195 Query: 87 T--QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 +E+ K +++ IFI+ RG +L+ A I++ + HPHMLRH+ Sbjct: 196 LPWREKTMQKFSEKHSYIFINTRGRQLTETGAEYILKQVSKRSKLTANIHPHMLRHSFAT 255 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYT 172 L GAD R +Q+ LGH ++ T YT Sbjct: 256 HLLNNGADIRTVQELLGHASLSTTQIYT 283 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 4/167 (2%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT EV ++ ++ R+ ++ L Y G+R+SEL++L + D++L + + I Sbjct: 113 LTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDINLEDCFLRIIG- 171 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + P + + + ++R + D IFISR G +LSR + +R +++ Sbjct: 172 KGSKERLVPFGNKAKFFISIYLKKRRPCLNVN--DHIFISRLGKKLSRIEFWRQLKNIAK 229 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 G PH LRH+ L + GAD R +Q+ LGH +I T YT Sbjct: 230 NVGINKNITPHTLRHSFASHLLKGGADIRFVQEMLGHASITTTQIYT 276 >UniRef50_D0Y3M6 Integrase family protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y3M6_9CAUL Length = 313 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 81/154 (52%), Gaps = 5/154 (3%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 A G R C+I L Y G+RISELL L L + + I + K G + PL R A Sbjct: 137 AQGLRLACIIELIYASGLRISELLALPLTALARDPAYL-IVKGKGGKERLAPLNDAARAA 195 Query: 83 VERWTQERANW--KGADRTDAIFISRRGS-RLSRQQAYRIIRDAGIEAGTV-TQTHPHML 138 V + R + KGA + +F SR GS RL+ ++ +++ DA I AG + PH+L Sbjct: 196 VNAYLAGRRTFLPKGAKESPWLFPSRGGSGRLTARRVGQLLDDAAIAAGIDRDKVSPHVL 255 Query: 139 RHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 RHA L E GAD R+IQ LGH +I T YT Sbjct: 256 RHAFATHLLEGGADLRVIQTLLGHADIATTQIYT 289 >UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0D4_HALNC Length = 329 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 9/176 (5%) Query: 13 QAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG--RINIRRLKNGFS 70 Q + Q + RD C+ L Y G+R++EL+ L D+D +EG R+ +R K Sbjct: 130 QLLDQPMVEDELLIRDRCMFELIYSSGLRVAELVRLDVHDIDRSEGIARVTGKREKTRLV 189 Query: 71 TVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLS-RQQAYRIIRDAGIEAGT 129 V D V W R A+F++RRG RL+ R R+ R A + Sbjct: 190 PVGGKALDR---VALWLPIRKTLLKDTTEPALFLNRRGQRLTIRSVQMRLNRLA--QQTH 244 Query: 130 VTQT-HPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + QT HPH LRHA + E D R +Q+ LGH ++ T YT + R A ++E Sbjct: 245 LGQTLHPHQLRHAFATHVLESSGDLRAVQEMLGHESLSTTQIYTHLDFQRLAQVYE 300 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 5/180 (2%) Query: 5 RYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 ++LT +E ++ A G ARD L L Y G+R SE+ L +D+DLN G + + Sbjct: 111 KFLTQEETDRLIDTAANQGKLPARDKALFELIYSSGLRRSEVTGLSIKDIDLNLGVVRVM 170 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + P+ EA++ + R + D +F++R G RL+ ++++ Sbjct: 171 G-KGSKERLVPITDLAIEALKEYLSTRGVYNSGD---PLFLNRLGGRLTGDGLAYLVKNI 226 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 I+A + H LRH+ + G D R +Q+ LGH+++ T YT + R ++ Sbjct: 227 TIKANLARKVTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHVSLDRLKKIY 286 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 3/169 (1%) Query: 6 YLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 YLT E++ + ++ RD C+ L Y G+RISE +L D+DL EG Sbjct: 113 YLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDMDL-EGMTLTVE 171 Query: 65 LKNGFSTVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K G + P + + R+ Q R + + +F+S++GS ++R+ +R++ Sbjct: 172 GKGGRQRLVPFGEKSLDILNRYLKQSRPFILKSRNCEYLFVSKKGSYINRKSVWRLLNHY 231 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + + PH LRH+ L E AD + +Q+ LGH +I T YT Sbjct: 232 IKRTSILKKVTPHTLRHSFATHLLENHADLKSVQELLGHIDIATTQIYT 280 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 4/168 (2%) Query: 6 YLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 YLT +VQ ++ + G R+ C++ L Y G+RISE ++ QD+ + + + Sbjct: 113 YLTVDQVQDLLDSFDLEDKKGLRNRCIVELLYACGLRISECANIKIQDIHFRDYYVRVMG 172 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P + + + ++ ++ ++ + +D F +G +S + ++ G Sbjct: 173 -KESKERIVPFYKELGDLLTKYLKKYGSF--SQLSDPFFKGSKGKAISVRSIQLLLEKKG 229 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 E Q HPH+LRH+ L + GAD R++Q LGH N+ T YT Sbjct: 230 RELKLPFQLHPHVLRHSFATHLLDNGADLRIVQSLLGHENLSTTQIYT 277 >UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteobacteria RepID=A0L875_MAGSM Length = 296 Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 9/190 (4%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-----TGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 +R L +A +A+ Y G RD ++ L Y G+R+SEL+ L LD Sbjct: 104 PQRKLPNTLSEAETEALLYAPDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLDEEN 163 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERW--TQERANWKGADRTDAIFISRRGSRLSRQQ 115 G + + N V P+ E V R+ + + KG R + +F+S RG+ ++R Sbjct: 164 GFVRVIGKGNKERIV-PMGEAATEMVIRYRHSARQVLLKGG-RCNDLFLSNRGAAMTRHN 221 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 + I++ EA + PH +RHA L GAD R +Q LGH +I T YT Sbjct: 222 FWHIVKRYAYEANIMKPLSPHGIRHAFATHLLNHGADLRAVQMMLGHADISTTEIYTHVA 281 Query: 176 AARFAGLWER 185 AR L ++ Sbjct: 282 NARLKKLHDQ 291 >UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IL8_THICR Length = 317 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 18/168 (10%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTV---------HPLRF 77 RD + + Y G+R+SEL++L DL+ G + L +G+ V P+ Sbjct: 150 RDQAIFEILYSGGLRVSELVEL-----DLSPG---LDGLASGWVRVLGKGQKERDAPVGQ 201 Query: 78 DEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHM 137 ++A+ RW + R+++ A+F++R G RL + + ++AG T+ PH Sbjct: 202 PAQKALHRWLEIRSDYAQPGE-QAVFVNRFGKRLGVRSIQTQLDKRTLQAGLPTKMSPHR 260 Query: 138 LRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 LRHAC + E D R +Q+ LGH N+ T YT + A ++++ Sbjct: 261 LRHACATHVLESSGDLRAVQEMLGHANLSTTQIYTKLDLQHLATVYDK 308 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 8/171 (4%) Query: 7 LTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +E++ ++ + G G R+ ++ Y G+R+SE+ +L L + G I + Sbjct: 131 LSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQISQLHFDAGFIRVVG- 189 Query: 66 KNGFSTVHPLRFDEREAVERWTQER----ANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + P+ D + + + E KG + D +F++RRGS L+R + +I+ Sbjct: 190 KGDKERLVPIGSDAVKYINIYKDEVRVHVPVKKGQE--DILFLNRRGSALTRVMIFLVIK 247 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + AG Q PH RH+ L E GAD R +Q+ LGH +I T YT Sbjct: 248 ELTAAAGIDKQVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYT 298 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 4/170 (2%) Query: 11 EVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFS 70 EV+ ++ + RD ++ L Y G+R+SEL+ L D++ G I ++ K Sbjct: 116 EVKRLLSVMLESKYYLRDIAMLELMYASGLRVSELVRLKLSDINFEAGFIRVKG-KGDKE 174 Query: 71 TVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGT 129 V P+ + ++ + + R ++ +F++ RG ++RQ+ ++ I+ G AG Sbjct: 175 RVVPIAQRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQPMTRQRFWQNIKAIGRIAGV 234 Query: 130 VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 PHM+RH+ L E GAD R +Q LGH +I T YT + R Sbjct: 235 --NVTPHMIRHSFATHLLEGGADLRSLQKMLGHSDISTTQIYTKVSMDRL 282 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 8/187 (4%) Query: 6 YLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +L EV+ ++ + G RD + Y GMRISEL+ L D+D++ + + Sbjct: 108 FLNFDEVEKLINSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMDMHREIMKVTG 167 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDA-IFISRRGSRLSRQQAYRIIRDA 123 K P+ E ++ + R + +R + +F+SR G +L R+ + II+ Sbjct: 168 -KGSKQRFVPMYGSLAEKMKTYLDIRHDSLVKERDEGWLFLSRNGKKLDREYVWMIIKKY 226 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 AG PH LRH+ L GAD R IQ LGH ++ T RYT + Sbjct: 227 CERAGIKKNVSPHTLRHSFATHLLTNGADLRTIQVLLGHVDLSTTERYTQVTDNK----- 281 Query: 184 ERNNLIN 190 RN L+N Sbjct: 282 ARNTLLN 288 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 4/156 (2%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD ++ L Y G+R+SEL+ +H D D ++G I + K G PL + + Sbjct: 134 GFRDKVILELLYASGIRVSELIGVHVLDFDQDKGIIKVFG-KGGKERYIPLHSSAMKLLI 192 Query: 85 RWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + Q+ R + ++ +F++R G L+RQ ++II+ + A PH RH Sbjct: 193 HYVQKIRPMFTPIEK--FLFLNRSGKGLTRQAIWKIIKRYALLASINKSISPHTFRHTFA 250 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 L E GAD R +Q LGH ++ T YT + R Sbjct: 251 THLLEGGADLRSVQLLLGHVDMSATELYTHVQSDRL 286 >UniRef50_Q2B588 DNA integration/recombination/invertion protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B588_9BACI Length = 185 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 71/150 (47%), Gaps = 8/150 (5%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD--EREA 82 +RDYCL LL G+RI++LL L +D G I + L + P+ F+ REA Sbjct: 24 SSRDYCLFLLGINTGIRINDLLHLQVKDAADESGNI-LSYLHTSENCFPPIYFNLQVREA 82 Query: 83 VERWTQERANWKGADRTDAIFISRRG-SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHA 141 + + +E G R D +F SR+ + ++R QAYRII +A AG H LR Sbjct: 83 LHKCIKEN----GLKREDPLFKSRKSHNSITRVQAYRIINEAARAAGIEEPVGTHTLRKT 138 Query: 142 CGYELAERGADTRLIQDYLGHRNIRHTVRY 171 GY +G LIQ L + T Y Sbjct: 139 FGYHAYSKGIAVSLIQKRLQQSSPSETYSY 168 >UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepID=XERC_CHLT2 Length = 315 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 14/173 (8%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT ++V A+M A TG RD CL+ L Y G+RISE+ L+ D+D ++IR Sbjct: 129 LTYEQVLALMAAPELDKVTGFRDRCLLELFYSSGLRISEITALNRADIDFQSHLLHIRG- 187 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTD------AIFISRRGSRLSRQQAYRI 119 K + P+ + AV+ W Q+ N DR A F++R G RLS + R Sbjct: 188 KGKKERIVPM---TKVAVQ-WLQDYLN--HPDRASVEQDHQACFLNRFGKRLSTRSIDRK 241 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + ++ G PH +RH ERG D + IQ LGH ++ T YT Sbjct: 242 FQQYLLKTGLSGSITPHTIRHTIATHWLERGMDLKTIQLLLGHTSLETTTIYT 294 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 3/164 (1%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 G RD + L Y G+R+SEL+ L+ D+D RI +R K + P+ E Sbjct: 139 PAGMRDALIQELMYGTGVRVSELVGLNLSDIDFGGMRILVRG-KGKKERIVPIADMHIEM 197 Query: 83 VERWTQERANWKGADRTD--AIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRH 140 + + + + D AIFI++ GSRL+ + RI+ AG PH RH Sbjct: 198 INDYLDVKMDICNGYLPDNEAIFINKFGSRLTDRSVRRIVEKYLKIAGLPMDFSPHSFRH 257 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + L E GAD R IQ LGH ++ T +YT N +++ Sbjct: 258 SYATHLLEGGADLRTIQSLLGHESLTTTQKYTHLNLTELLRVYD 301 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 3/183 (1%) Query: 7 LTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+G E+ A+M + G RD + L Y G+R+SE++ L L L + + Sbjct: 109 LSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAMNLLQVTG- 167 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P+ + V R+ QE R + A+F++ G L+RQ ++ ++ Sbjct: 168 KGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQVIWKNLKAYI 227 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 G PH LRH+ L E GAD R++Q+ LGH +I T YT + ++ Sbjct: 228 ASVGIEKDVTPHTLRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLVAVYH 287 Query: 185 RNN 187 + + Sbjct: 288 KTH 290 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 11/176 (6%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S + L+ EV+ +++A + G RD ++ Y G+R+SEL + +DL G + Sbjct: 110 SLPKILSQDEVERLIEAPDPHRPEGVRDRAILSFFYASGLRVSELATITADRVDLATGAL 169 Query: 61 NIRRLKNGFSTVHPLRF-DERE---AVERWTQERANWKGADRTDAIFISRRGSRLSRQQA 116 + G + F DER + T R + A +F++R G+ L+RQ Sbjct: 170 RV----MGKGAKERIAFLDERTRHLLSDYLTTVRPAF--AREHPELFLARDGAPLTRQAL 223 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + +I+ G AG + PH+LRH+ L E+G D R IQ LGH +IR T YT Sbjct: 224 WTLIKKHGRAAGITSPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYT 279 >UniRef50_C7R3C1 Integrase family protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3C1_JONDD Length = 333 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 2/148 (1%) Query: 32 ILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERA 91 + L Y G+RI+EL+ L+ D+D + I + N V PL +A+ERW E Sbjct: 177 VELTYSSGLRIAELVSLNVGDIDHEQRVIRVTGKGNKQRRV-PLGLPALQALERWIAESR 235 Query: 92 NWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGA 151 + +A+F+ RG R + +Q + A + A + PH LRH L E GA Sbjct: 236 PIMQSTSEEALFLGVRGGRWNARQVRDELNKAALHAD-LDVVRPHDLRHTTATHLLEGGA 294 Query: 152 DTRLIQDYLGHRNIRHTVRYTASNAARF 179 D R +Q+ LGH ++R T RYT R Sbjct: 295 DLRSVQEILGHSSLRTTQRYTHVTMTRL 322 >UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D807_9ACTN Length = 319 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 26/177 (14%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE------GRI 60 LT ++ ++ C+ RD ++ + Y G+R+SEL L+ D+ +++ G+ Sbjct: 137 LTARKALSLKPQACF----YRDKAILEMLYGCGLRVSELCGLNQGDVLVSDELVRVFGKG 192 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG-----ADRTDAIFISRRGSRLSRQQ 115 + RL T A+E + W+ TDA+F+S RG+R+SRQ Sbjct: 193 SKERLVPCLGT----------ALESYQNYCTKWRALLACSPKTTDAVFLSVRGTRISRQA 242 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + ++ G G + HPH LRH+ + E G + R++Q+ LGH +I T YT Sbjct: 243 VFSLVERYGSYVG-IKGLHPHTLRHSYATHMLEGGMNLRIVQELLGHASISTTQLYT 298 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 11/178 (6%) Query: 5 RYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + LT +++A++ A G R+ ++ L Y G+R+SEL+ L L+ +G + I Sbjct: 130 KALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSELVTLPVAMLNQRQGVLRIT 189 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRT--------DAIFISRRGSRLSRQQ 115 K G + PL + + ++R+ ++ AD+ +FI+ RLSRQQ Sbjct: 190 G-KGGKERLVPLGEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTNLKRLSRQQ 248 Query: 116 AYRIIRDAGIEAGTVT-QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +R I+ G + PH+LRH+ L GAD R +Q LGHR+I T YT Sbjct: 249 FWRWIKHYAALVGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSISTTQIYT 306 >UniRef50_Q9A437 Tyrosine recombinase xerD n=11 Tax=Alphaproteobacteria RepID=XERD_CAUCR Length = 305 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 87/168 (51%), Gaps = 7/168 (4%) Query: 11 EVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNG 68 E++ ++ A A G R C+I L Y G+RISELL L L + + I + K G Sbjct: 117 EIERLLAAASAKDSAQGLRLACMIELIYASGLRISELLALPLLALARDPAYL-IVKGKGG 175 Query: 69 FSTVHPLRFDEREAVERWTQERANW--KGADRTDAIFISRRGS-RLSRQQAYRIIRDAGI 125 + PL R AV+ + ER + KG + +F SR + RL+ ++ +++ DA I Sbjct: 176 KERLAPLNDAARAAVKAYLVERPAFLPKGQKDSPWLFPSRGATGRLTPRRVGQLLEDAAI 235 Query: 126 EAGTVTQ-THPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 AG Q PH+LRHA L E GAD R+IQ LGH +I T YT Sbjct: 236 AAGIDRQKVSPHVLRHAFATHLLEGGADLRVIQTLLGHADIATTQIYT 283 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 4/155 (2%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 GARD ++ Y G+R+SEL L D+D R+ K G + P+ A++ Sbjct: 130 GARDKAILETLYACGLRVSELCQLKIYDVDDTFVRV---LGKGGKERIVPIGQQAIAAID 186 Query: 85 RWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 + R + + R + +FI+++ L+R +++++ +A PH RH Sbjct: 187 GYLSFREGGENS-RNEFLFITKKSKPLTRALVWKLVKFYARQASIFKSISPHTFRHTFAT 245 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 L + GAD R+IQD LGH +I T RYT + R Sbjct: 246 HLLDHGADLRVIQDMLGHASINSTDRYTHVSQIRL 280 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 6/182 (3%) Query: 5 RYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG--RIN 61 + L+ ++V ++ A C RD ++ + Y G R++E++ L + L EG R Sbjct: 129 KVLSPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIVTLPLNSVKLTEGYARCV 188 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRII 120 + K +++P+ EA R ER + T+ A+F++R G +LSR + I+ Sbjct: 189 GKGNKERMVSLNPVAVAAVEAYLR--HERPVLTRRNTTEQALFLNRGGKQLSRVMVWNIV 246 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + G + PH LRH+ + GA+ R +Q+ LGH NIR T YT + +R Sbjct: 247 KKNAARVGCSKEVSPHTLRHSFATHMMAGGAEIRALQELLGHANIRTTQIYTHVDHSRLK 306 Query: 181 GL 182 + Sbjct: 307 AV 308 >UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacteria RepID=Q1IMN8_ACIBL Length = 313 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 R L KE QA+ RD ++ + Y +R+SE++ + +D L+ G + +R Sbjct: 130 RVLDTKESQAL---------ALRDRAMLEVFYAGALRVSEMIGVRMEDAKLDLGYMMVRG 180 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSR-LSRQQAYRIIRDA 123 K + PL AV+ + + A +T I +G R LSRQ+ ++++ A Sbjct: 181 -KGDKERIVPLGQSALVAVKSYLESGREVLCAGKTSPILFVGKGCRKLSRQRVWQMVSAA 239 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +G PHMLRH+C + E GAD R +Q LGH +I T YT Sbjct: 240 SQASGR--HASPHMLRHSCATHMVENGADLRTVQTILGHADISTTQIYT 286 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 4/169 (2%) Query: 7 LTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 ++ ++V A++ A RD ++ L Y G+R++EL+ L +++ L +G + + Sbjct: 120 ISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVRVTG- 178 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K G + P+ + + +E + ++ R G +D +F S+R +++RQ + I+ Sbjct: 179 KGGKERLVPMGENAIDWIETFIKQGRPALLGETSSDVVFPSKRARQMTRQTFWHRIKFYA 238 Query: 125 IEAGTVT-QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + AG T PH+LRHA L GAD R++Q LGH ++ T YT Sbjct: 239 VIAGIDTDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYT 287 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 7/172 (4%) Query: 5 RYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 R+L+ +V A+++ G R+ ++ + Y G+R+SEL+ L + +DL + + Sbjct: 109 RFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDLVACFVRLF 168 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANW---KGADRTDAIFISRRGSRLSRQQAYRII 120 K + P R+ W + W K A R +F++R G+ ++RQ ++++ Sbjct: 169 G-KGSRERIVPFGSHARQRTMEWLEWGRPWMLKKNASRY--LFVARAGNPMTRQGFWKLL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + + AG + PH LRH+ L E GAD R +Q LGH +I T YT Sbjct: 226 KKYALGAGISIKVSPHTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYT 277 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 4/181 (2%) Query: 6 YLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +L E++ +++ + G RD + L Y G+R+SE + L +D+D + ++I Sbjct: 116 FLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVDFADNILHIHG 175 Query: 65 LKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + P +E + + ++ R W +D T A+F+++RG +L+ + ++ A Sbjct: 176 -KGDKERLVPFYDLAKELLVSYIKDVRDVWATSDET-ALFVNQRGKKLTTRGVQYLMNKA 233 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 + HPHM RH+ L + GAD R +Q+ LGH ++ T Y + R + Sbjct: 234 VEKCDLHVHVHPHMFRHSFATHLLDNGADLRYVQELLGHSSLSTTQIYVHVSKERLKAAY 293 Query: 184 E 184 E Sbjct: 294 E 294 >UniRef50_C5BWU3 Integrase family protein n=11 Tax=Actinomycetales RepID=C5BWU3_BEUC1 Length = 380 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 70/147 (47%), Gaps = 4/147 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFST-VHPLRFDEREAVER 85 RD ++ L Y +R+SEL L D+DL E R+ +R L G V P A+E Sbjct: 219 RDSAMLELLYGAALRVSELAGLDTGDVDLRE-RL-VRVLGKGAKERVVPFGLPAARAIEA 276 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 W R G A+F+ RG R+ + ++ A AG V PH LRH+ Sbjct: 277 WISVRPELAGPRSGRALFLGARGGRIDPRVVRDVVHRATARAG-VRDLAPHGLRHSAATH 335 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYT 172 L G+D R +Q+ LGH ++ T RYT Sbjct: 336 LLAGGSDLRSVQEILGHASLATTQRYT 362 >UniRef50_Q6MKT3 Integrase/recombinase XerD n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKT3_BDEBA Length = 292 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 3/170 (1%) Query: 5 RYLTGKEVQAMMQA--VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + LT +E Q + A V AR+ +L Y G R+SEL+ L+ D + + I + Sbjct: 99 KVLTPQEFQQLFDAAEVPDAVKTARNQLTLLFLYGLGCRVSELIGLNVVDFNQTDRWIKV 158 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 N V PL E + + +E + + +I I+ RG R SR +R + Sbjct: 159 LGKGNKERLV-PLTEKLAENLTVYLKEHRMALVKENSPSILINDRGHRPSRVDVWRWLAA 217 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 AG +PH RH C L E GAD R IQ LGH +I+ T YT Sbjct: 218 WSARAGFAEPVNPHRFRHGCATALLESGADLRSIQMLLGHASIQTTQIYT 267 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 14/153 (9%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI-------RRLKNGFSTVHPLRFDE 79 RD ++ LAY G+R+SE + + +D+ L + + + R + G S + + Sbjct: 149 RDRAMLELAYGAGLRVSEWIGMSVKDVMLEDSLVRVLGKGNKERLVPIGRSAIGAVAVYL 208 Query: 80 REAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLR 139 RE R ER KG +F++ RG+ LSR A++++R AG PH LR Sbjct: 209 REL--RPVLERGGGKGI-----LFLNGRGAPLSRMGAWKLVRKYVGMAGIEKPVSPHTLR 261 Query: 140 HACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 H+ L E GAD R +Q+ LGH +I T YT Sbjct: 262 HSFATHLLEGGADLRAVQEMLGHADIATTQIYT 294 >UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2S2Y8_TREPS Length = 306 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 11/179 (6%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG-ARDYCLILLAYRHGMRISELLDLHYQDLDLNE--- 57 S R L+ ++V +Q++ G RD L L Y G+R+SE + L D+ E Sbjct: 107 SLPRVLSPEQVNTFLQSIPLCTPGGVRDRALFELIYAAGLRVSEAVSLSLSDIFFAERLL 166 Query: 58 ---GRINIRRLKN-GFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 G+ N R+ G + L REA R+T + + + +++ A+F++R+G RLSR Sbjct: 167 KVTGKGNKERMAPFGEQACYFLMQYIREARVRFTSAK-HPENSEKKGAVFLNRQGGRLSR 225 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + ++ ++D I +G +TH H RH+ L G D +Q LGH +I T YT Sbjct: 226 KGIWKRLQDIEIRSGV--ETHVHTFRHSYATHLLAGGVDLHSVQCLLGHADIATTQVYT 282 >UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales RepID=XERC_CHLFF Length = 312 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 10/171 (5%) Query: 7 LTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +T ++V+ +M TG RD CL+ L Y G+RISE++ L++ D+D N I IR Sbjct: 129 ITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVSLNHWDIDFNSNLIRIRG- 187 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR----IIR 121 K + P+ + ++++ A + AIF++ G+RL+ + R +R Sbjct: 188 KGKKERIIPITTLAAQWLKQYLNHPERAGVAKDSQAIFLNCFGTRLTTRSIDRKFQKYLR 247 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +G+ +G +T PH +RH E G D + IQ LGH ++ T YT Sbjct: 248 LSGL-SGNIT---PHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYT 294 >UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C57_SOLUE Length = 303 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 4/160 (2%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVER 85 ARD + L Y G+R+SEL L+ +D+D EG + +R K PL +++ER Sbjct: 143 ARDRAIFELLYGCGIRVSELAGLNLEDIDRTEGWLRVRG-KGKKERQVPLPGQAAQSLER 201 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 + ER A A+F++ R +RL+ + I++ HPH RHA Sbjct: 202 YLAERPV---AREQPAVFVNHRRARLTTRGISGIVKLYATYLSNDPGIHPHSFRHAYATH 258 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 L GAD R IQ+ LGH + T +YT + ++++ Sbjct: 259 LLADGADLRAIQELLGHARLSTTQKYTQVSLTDLMAVYDK 298 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 6/154 (3%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFST-VHPLRFDEREAVER 85 RD ++ L Y GMR+SEL L D+D + R +R L G + P +A+E+ Sbjct: 151 RDSAILELLYATGMRVSELCGLDLGDVDHH--RRMVRVLGKGDKERMIPFGKAAADALEQ 208 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 W + R + A DA+F+ RG R+ +Q RI+ D + PH LRH Sbjct: 209 WLEARD--RMAKVEDAMFVGVRGGRIDARQIRRIV-DRTAQVAGADHLSPHSLRHTAATH 265 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 L + GAD R +Q+ LGH +++ T YT ++ R Sbjct: 266 LLDGGADLRQVQEMLGHSSLQTTQIYTHVSSQRL 299 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 49/83 (59%) Query: 90 RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAER 149 ++ KGA A+F+++RG RLSRQ + IIR AG A HPH LRH+ L + Sbjct: 217 QSKSKGAAEHRAVFLNKRGKRLSRQSVWEIIRTAGERAHITKPLHPHTLRHSFATHLIQG 276 Query: 150 GADTRLIQDYLGHRNIRHTVRYT 172 GAD R +Q+ LGH ++ T YT Sbjct: 277 GADVRTVQELLGHASVTTTQIYT 299 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 7/151 (4%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDE--REAV 83 R+ ++ L Y GMR+SEL DL + LDL G I + N V FD+ ++ + Sbjct: 130 VRNRAIVALFYATGMRLSELTDLKIKQLDLENGMILVHGKGNKDRYVF---FDQESKKYL 186 Query: 84 ERWTQE--RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHA 141 E + Q + K T A+F+++ G +S + + ++ +AG HPH LRH+ Sbjct: 187 EEYLQAARPSLLKNEPDTGAVFLNKLGRPISSRGIAKAVQQIFQKAGLTAGAHPHELRHS 246 Query: 142 CGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + GAD R +Q+ LGH ++ T YT Sbjct: 247 FATAMLNNGADLRSVQELLGHEDLSTTQIYT 277 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 5/174 (2%) Query: 7 LTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 LT EV ++ AV T G RD + L Y G+R+SE+ L D+ EG+ Sbjct: 104 LTDTEVDDLL-AVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDI-FFEGKYLKIC 161 Query: 65 LKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + P+ + ++R+ Q R +T +F++ RG ++SR ++I+++A Sbjct: 162 GKGKRERIVPINDRALDILQRYIQTSRVIMVKGKKTSELFLNFRGDKISRVGIWKIVKEA 221 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 ++ +PH LRH+ L + GAD R +Q LGH +I T YT ++A Sbjct: 222 MKKSKIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYTHVDSA 275 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 73/159 (45%), Gaps = 10/159 (6%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI--RRLKNGFSTVHPLRFDEREA 82 G RD ++ L Y G+R+SEL L D D G + + + K VH + A Sbjct: 152 GFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSCALVTA 211 Query: 83 VERWTQERANWKGA--DRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRH 140 R +W+ A A+F++R G LSRQ +++++ EAG PH RH Sbjct: 212 YLR------DWRPAFSPVEPAMFLNRSGKGLSRQAVWKVVKRHVAEAGIHKDISPHTFRH 265 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + L E GAD R +Q LGH +I T YT A R Sbjct: 266 SFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRL 304 >UniRef50_A3IZP4 Tyrosine recombinase xerC n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZP4_9CHRO Length = 285 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 8/147 (5%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDL-NEGRINIRRLKNGFSTVHPLRFDEREAVER 85 RD+ ++ L Y G+RISE L +QDL +G + K G S V + V Sbjct: 127 RDFLMLSLIYACGLRISEASRLTWQDLQPRKDGGQALIDGKGGQSRVVLI------PVGL 180 Query: 86 WTQERANWKG-ADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 W + A + TDA+F SRR L+R + ++I++ A ++AG +T H LRHA Sbjct: 181 WAKLMAFQSLRSPHTDAVFYSRRQKELARSRIHQIVKQAALDAGINPKTSAHWLRHAHAT 240 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRY 171 E G D L+Q LGH +I T RY Sbjct: 241 HSLENGCDISLLQQSLGHSDITTTQRY 267 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 4/176 (2%) Query: 11 EVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFS 70 EV +++ RD ++ L Y G+R++EL+D+ +D+ L G I + N Sbjct: 127 EVNQLLEVNEDDPLAIRDRAIMELMYGAGLRLAELVDIDVRDVHLRSGEIRVIGKGNKER 186 Query: 71 TVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRDAGIEAGT 129 V P E V +W + R+ AD ++ A+F+S+ G+R+S + + + + G + Sbjct: 187 KV-PFAGMAVEWVGKWLKVRSGL--ADPSEPALFVSKLGTRISHRSVQKRMAEWGQKQAV 243 Query: 130 VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 + PH LRH+ + E + R +Q+ LGH NI T YT + A ++++ Sbjct: 244 ASHITPHKLRHSFATHILESSNNLRAVQELLGHENISTTQIYTHLDFQHLADVYDQ 299 >UniRef50_A6M1R6 Phage integrase family protein n=11 Tax=Clostridium RepID=A6M1R6_CLOB8 Length = 199 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 11/173 (6%) Query: 5 RYLTGKEVQAMMQAVCYGAT--GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +YLT KEV ++ A+ RD + LAYR G+R SE+ L ++ ++N+G I Sbjct: 10 KYLTQKEVLSLFNAIENSGKLHSTRDLAIFRLAYRCGLRASEISMLKLENYNINKGEIYC 69 Query: 63 RRLKNGFSTVHPLRFDE--REAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +RLK S + LR DE + ++++ E + + IF S++ +SRQ + Sbjct: 70 KRLKG--SKNNTLRLDEKTKSVLDKYITEN---EITSESQTIFTSQKNKPISRQTLDHLT 124 Query: 121 RDAGIEAGTVTQT--HPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + A ++ H H ++H LAE D + +Q +LGH+++ +T Y Sbjct: 125 KQYFSMASIQDKSKHHFHTIKHTTAVHLAECDMDIKELQWWLGHKSVTNTEIY 177 >UniRef50_A6G048 Site-specific recombinase, phage integrase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G048_9DELT Length = 346 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 80/182 (43%), Gaps = 18/182 (9%) Query: 22 GATGARDYCLILLAYRHGMRISELLDLHYQDL----DLNEGRINIRRL--KNGFSTVHPL 75 GA G RD L+ + Y G+R+SE + L+ DL + R+ +R L K V PL Sbjct: 128 GAVGLRDRALLEVLYGAGLRVSEAVALNLADLRWEGSGDAARLTLRVLQGKGNKDRVVPL 187 Query: 76 RFDEREAVERW---------TQERANWKGADRTDA---IFISRRGSRLSRQQAYRIIRDA 123 EA+ W R + R DA +F+ RG RLS + A ++ Sbjct: 188 GRKGAEAMRAWLDTREGLLAPTPREGMRSPARIDAGKAVFLGARGGRLSTRVAREVVYRR 247 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 +G PH LRH+ L + G D R IQ LGH ++ T RYT + L+ Sbjct: 248 CQASGARAVVGPHGLRHSFATHLLQSGCDLRSIQSMLGHASLSTTQRYTHLDMGHLFSLY 307 Query: 184 ER 185 ER Sbjct: 308 ER 309 >UniRef50_B2JBK3 Phage integrase family protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JBK3_NOSP7 Length = 309 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 24/182 (13%) Query: 5 RYLTGKEVQAMMQAVCYGATGA----------RDYCLILLAYRHGMRISELLDLHYQDLD 54 RYL +++ +++A T A R+ +I L Y+ G+R SE+ +L + DL Sbjct: 121 RYLDEADIKLLVRAASKHLTDAKTPKRQYTALRNLLIIKLLYQAGLRASEICELTWGDLT 180 Query: 55 L--NEGRINIRRLK---NGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGS 109 + G++ +R+ K N + P + W + A A+F S++G Sbjct: 181 PRGDSGQVYVRKAKGSKNRTILIKP---------KLWAELIEFKDNAHSNQAVFPSQKGG 231 Query: 110 RLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTV 169 L RQ + I++ +EAG H LRHA G ERG + L+++ LGH N+ T Sbjct: 232 HLDRQNLHPIVKAIALEAGLSELVSAHWLRHAHGSHAIERGTNPVLVKETLGHANLAITD 291 Query: 170 RY 171 RY Sbjct: 292 RY 293 >UniRef50_C8N6J9 Tyrosine recombinase XerC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6J9_9GAMM Length = 301 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 14/173 (8%) Query: 7 LTGKEVQAMMQAVCYGATG-ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT +++ +++A RD+ ++ L Y G+R++EL L +DL + +I R Sbjct: 109 LTPEQITTLLEAPATDNPNLIRDHTILELFYSAGLRLAELASLDNRDLG-PDSEHHIIRG 167 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLS------RQQAYRI 119 K G + + REA+ RW R A+F+++ G RL+ R +AY Sbjct: 168 KGGVERLIFIGSKAREALARWQTVRGQLLKKADEPALFLNKNGGRLTERGIALRLKAYAA 227 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 R G+ HPHMLRH + + D R +Q+ LGH+N+ T YT Sbjct: 228 ERLPGV------NVHPHMLRHTFASHILQSSGDLRSVQELLGHKNLATTQIYT 274 >UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W041_9ACTO Length = 302 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 15/163 (9%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNE------GRINIRRLKNGFSTVHPLRFDER 80 RD+ L Y G+R++EL+ L+ +D + G+ N RL P Sbjct: 140 RDWATSELLYSCGIRVAELVGLNLTSVDGSNRTLRVIGKGNKERLV-------PFGTPAL 192 Query: 81 EAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLR 139 E++ W TQ R A+F+ RG R+ ++ + A ++AG V PH LR Sbjct: 193 ESLRAWVTQGRPQLVNERSGQALFLGSRGGRIDQRIVRECLEKACVQAG-VPVLSPHGLR 251 Query: 140 HACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 H + E GAD R +QD LGH ++ T RYT +A R + + Sbjct: 252 HCAATHMLEGGADLRTVQDMLGHASLATTQRYTHVDAVRLSNI 294 >UniRef50_Q2NB52 Tyrosine recombinase xerC n=5 Tax=Sphingomonadales RepID=XERC_ERYLH Length = 306 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 14/191 (7%) Query: 5 RYLTGKEV-----QAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + L+ KEV QA +A R LI L Y G+R +EL+ L + + Sbjct: 105 KTLSHKEVERLFEQAEREAETSRPLPVRLLALIELLYGSGLRATELVSLPVAAVPRDAPF 164 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K G + + P+ REA++ W +G+D + +F SR+ + ++R + +++ Sbjct: 165 LTVTG-KGGVARMVPVSGRAREALQSWM----GLRGSD-SPYLFPSRK-AHITRVRLFQM 217 Query: 120 IRDAGIEAG-TVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ + A + PH+LRHA L E GAD R++Q LGH +I T YT +AAR Sbjct: 218 LKELAVRADLNPDKVSPHVLRHAFATHLLEGGADLRVLQTLLGHADISTTQIYTHVDAAR 277 Query: 179 FAGLW-ERNNL 188 L ER+ L Sbjct: 278 LVALVNERHPL 288 >UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria RepID=Q2C2Q0_9GAMM Length = 302 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 4/159 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFST-VHPLRFDEREAVER 85 RD ++ L Y G+R++EL+ + + + L++G ++R + G V P RE V + Sbjct: 136 RDRAMMELMYGAGLRLAELVGIDVRHISLSKG--DLRVIGKGDKERVVPFSGLAREWVAK 193 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 W + R N A+ A+F+S+ G+R+S + + + + G + + +PH LRH+ Sbjct: 194 WLKLRDNIALAEEP-ALFVSKLGTRISTRNVQKRMAEWGQKQAVSSHINPHKLRHSFATH 252 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + E D R +Q+ LGH N+ T YT + A +++ Sbjct: 253 MLESSGDLRAVQELLGHANLSTTQIYTHLDFQHLAKVYD 291 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 8/166 (4%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 LT V ++ A AR+ CL+ LAY G+R++EL+ L + DLD E I + K Sbjct: 136 LTQDAVNRLISAAGTIEPAARNRCLLELAYSAGLRVAELVSLKWSDLDETERWITVMG-K 194 Query: 67 NGFSTVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 + P A+ W Q + KG +F + G L+ + +R++ A Sbjct: 195 GSKERMVPYGQWAASALAEWKAQCPPSEKG-----WVFPGKGGKSLTERTVHRLVEAASQ 249 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 AGT + PH LRH + E GA + +Q+ LGH ++ T RY Sbjct: 250 LAGTPGAS-PHTLRHCFATHMLEGGASVKAVQELLGHESLLTTQRY 294 >UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V602_9PROT Length = 317 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 4/148 (2%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDL--DLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 RD + L Y G+R+ EL+DL + + D+ G + + K + + PL A+ Sbjct: 150 RDKAMFELFYSSGLRLMELIDLDAESIRSDITAGEVRVTG-KGHKTRIVPLGGCAISALH 208 Query: 85 RWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 W R A+F+ RG+R+S + ++ GI+ G + HPHMLRH+ Sbjct: 209 EWLAVRPTLANIGER-ALFVGARGARISPRVVQLRMKQWGIKQGITSSVHPHMLRHSFAT 267 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYT 172 + + D R +Q+ LGH +I T YT Sbjct: 268 HVLQSSGDLRAVQEMLGHASISTTQVYT 295 >UniRef50_C7NGY7 Site-specific recombinase XerD n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NGY7_KYTSD Length = 336 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 2/166 (1%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 AT RD ++ L Y G+R+ EL+ L + L + + + K V P A Sbjct: 169 ATDLRDRAVLELLYATGIRVGELVSLDTGAVSLQDHTVRVWG-KGSKERVVPFGVPALRA 227 Query: 83 VERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHA 141 +E W Q R GA +A+F+ RG R+ ++ R++ A PH LRH+ Sbjct: 228 LEEWVHQGRPELLGARSGEALFLGVRGGRIDPREVRRVVHRAAQRVEGAADIGPHGLRHS 287 Query: 142 CGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNN 187 + + GAD R +Q+ LGH ++ T YT + R ++R++ Sbjct: 288 AATHMVDAGADIRSVQELLGHASLATTQVYTHVSVERLREAFDRSH 333 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 2/168 (1%) Query: 6 YLTGKEVQAMMQAVCYGATGA-RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +LT ++ + + A R+ ++ Y G+R+SE+ L +LDLNE RI Sbjct: 129 FLTFDQMMTLFDSFDLNDPAALRNRAILETMYACGLRVSEVCSLTLAELDLNE-RILTVT 187 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P R + R+ ++ + +F+S+RG+ ++ + I+ AG Sbjct: 188 GKGDKQRIVPFYKRLRTLLTRYLRDSRALYLKEEHGFVFVSQRGAPITPRAVQLILAQAG 247 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +AG HPH+LRH+ L + G D R +Q+ LGH ++ T YT Sbjct: 248 QDAGLNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYT 295 >UniRef50_A4J2M3 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2M3_DESRM Length = 293 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 7/153 (4%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNG--FSTVHPLRFDEREAV 83 ARD LI L G+R+ E++ + DLD+ E + L G + V P+ + R+A+ Sbjct: 134 ARDIALIRLMMSCGLRVGEVVSIRLSDLDIGERHGTVAVLGKGKKYRKV-PVPPEARKAI 192 Query: 84 ERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + W ER + D +F +R ++ + ++I++ G AG HPH+LRH Sbjct: 193 KEWLAERT--QRYPDNDWLFPNRNVGNITARNVEQVIKNIGKFAGL--DLHPHVLRHTAA 248 Query: 144 YELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 + GAD + LGH N+ T YT ++ Sbjct: 249 TNMIRTGADIVTVAQILGHANLNTTAIYTKPDS 281 >UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CAFB Length = 297 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 2/169 (1%) Query: 5 RYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + L+ +E+ +++++ G R+ ++LL GMRISEL+ L D++ + +++ Sbjct: 105 KVLSLEEIIKVIKSIDDSNPAGKRNKAMMLLLINTGMRISELVHLEINDINHSVSNVSVV 164 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 N + PL + V + Q ++ +F+ G R++R+ Y I++ Sbjct: 165 GKGNKERLI-PLDEETCSYVYSYMQNDRSFFNKKNNQWLFMMNDGRRMTRENFYNILQKL 223 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 I AG PHMLRH L E D R IQ LGH++I T YT Sbjct: 224 VIGAGVRDHFTPHMLRHTFATTLLENHCDLRSIQVMLGHQDISTTTIYT 272 >UniRef50_Q31NY4 Phage_integrase-like n=3 Tax=Synechococcus elongatus RepID=Q31NY4_SYNE7 Length = 54 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 31/43 (72%), Positives = 35/43 (81%) Query: 137 MLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 M R +CGY LAE+G TR IQDYLGHRNI++TVRYTA N ARF Sbjct: 1 MFRQSCGYALAEQGLPTRDIQDYLGHRNIQNTVRYTAGNPARF 43 >UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHC9_ACHLI Length = 306 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI--RRLKNGFSTVHPLRFDEREA 82 G R+ ++ L Y G+R SEL++L +D+ L+ G+I I + K+ + +H +E Sbjct: 131 GYRNLVILDLLYSCGVRASELINLEIKDIYLSSGQILIHGKGKKDRYIILHEKLIEEIRH 190 Query: 83 VERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHA 141 + + KG D +FI+ +G L+ + I+ ++G HPHMLRHA Sbjct: 191 YLSFVRVTLLSKGDDTNQQKLFINYKGGPLTVRGLRVILNQMIKDSGETYAIHPHMLRHA 250 Query: 142 CGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + GAD R++Q+ LGH +++ T YT Sbjct: 251 FATTMLNHGADLRVVQELLGHEHLKSTQIYT 281 >UniRef50_B1XQW1 Integrase/recombinase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XQW1_SYNP2 Length = 289 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 30/177 (16%) Query: 5 RYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQD-LDLNEGRINIR 63 R +T +VQAM A R+ +I Y G+R+SEL+++ + D + ++ + ++ Sbjct: 118 RIITKPKVQAM----AMNADTLRNELIIKTLYLLGVRVSELINIRWDDFIQTDDNGLKLK 173 Query: 64 RLKNG----FSTVHPLRFDEREAVERWTQERANWKGADRTDA--IFISRRG---SRLSRQ 114 + G F V +DE EA+ R D+ +F SR+G S+LSR Sbjct: 174 VMGKGDKVRFIVVPTGLWDELEAL--------------RNDSAYVFSSRKGNNGSKLSRI 219 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 Q YR+++ G G Q PH LRH+ + G D L+ + LGH NI T RY Sbjct: 220 QVYRVVKANGDRVGV--QVSPHFLRHSHATHSLKNGCDLHLLSESLGHGNIAITSRY 274 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREA 82 A G R+ ++ L Y G+R+ EL L+ QD++ + I + N V P +A Sbjct: 155 AVGLRNAAILELLYATGIRVGELTSLNIQDINFSSHTIKVTGKGNKQRVV-PFGVPAYKA 213 Query: 83 VERWTQE--RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRH 140 + W + R +A+F+ RG R+ ++ +I+ D ++ V PH LRH Sbjct: 214 LSAWISKDGREILLRNSVEEAVFLGTRGKRIDQRLVRQIVHDEA-KSAHVPDISPHALRH 272 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + + GAD R +Q+ LGH ++ T RYT Sbjct: 273 SAATHMLNGGADLREVQELLGHSSLNTTQRYT 304 >UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium RepID=C4L615_EXISA Length = 293 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 2/159 (1%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVER 85 ARD +I + Y G+R++EL ++ D +++ K P+ +A++R Sbjct: 131 ARDVAIIEVLYGTGIRVAELCGMNLSSFDEVLSFVHVMG-KGKKERYVPIGQYAVQALQR 189 Query: 86 WTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 + + R G A+F+S++G+R++ Q +++ ++G PH LRH+ + Sbjct: 190 YIELRKGV-GLPTETALFLSQKGNRMTTDQIRYVMKRLRKDSGVHKPLTPHSLRHSFATD 248 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 L ERGAD R +Q+ LGH ++ T RYT + R +++ Sbjct: 249 LLERGADLRAVQELLGHESLSTTGRYTHVSTERLRSIYQ 287 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 12/181 (6%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L EV A++ + A RD L LAY G+R EL+ L ++ + R+ + Sbjct: 126 LKPVEVAALLDRIPADTALALRDRALFELAYASGLRAEELVMLDVGSIEFDGERVRVEG- 184 Query: 66 KNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRIIR--- 121 K + + P +A+ R+ + R A+ A+F+S+ G RLS R +R Sbjct: 185 KGAKTRIVPAGEPALKAIARYLDRARPALATAESDGALFLSKSGRRLSTSDVRRRLRVWA 244 Query: 122 --DAGIE-AGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 AG+ AG V+ PH LRH+ L E GAD R IQ+ LGH +I T YT +AR Sbjct: 245 RQAAGVSTAGGVS---PHALRHSFATHLLENGADLRSIQELLGHASISTTQVYTRVESAR 301 Query: 179 F 179 Sbjct: 302 L 302 >UniRef50_B5Z5W0 Integrase/recombinase n=2 Tax=Bacillus cereus group RepID=B5Z5W0_BACCE Length = 319 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 12/159 (7%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G R+ +I + G+R SE+ +L +DLD G I IR K P+ D + + Sbjct: 151 GYRNLAIINIMLLAGLRASEVSNLKLEDLD--NGFILIRSSKGLKGRKLPINHDLGKVLN 208 Query: 85 RWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII----RDAGIEAGTVTQTHPHMLRH 140 +W R + + +F+S+RGS+ + ++ + GIE + PH LRH Sbjct: 209 KWLNVRNEKEQFSDSQYVFLSQRGSKFTEMGLTKLFITLEKKTGIEGLS-----PHTLRH 263 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRY-TASNAAR 178 ++L E+G +I DY GH +++ T+ Y T+SN + Sbjct: 264 TFCHDLVEKGTPIHIIADYAGHSSVKTTMIYVTSSNMEK 302 >UniRef50_Q8RAB1 Tyrosine recombinase xerD-like protein n=10 Tax=Thermoanaerobacteraceae RepID=XERDL_THETN Length = 290 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 7/139 (5%) Query: 25 GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVE 84 G RD LI L Y G+++SE++ L +D++L G I +R +G V P+ A++ Sbjct: 130 GLRDKALIELMYASGLKVSEVISLKIEDVNLASGYIVVR---SGKERVIPIGSYAVAALQ 186 Query: 85 RWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACG 143 + ++ R KG A+F++ RG RL+RQ ++II++ + P++LR + Sbjct: 187 EYIEKGRKPRKG---EKALFLNLRGKRLTRQGCWKIIKEYADKISPGLPLTPNILRKSFA 243 Query: 144 YELAERGADTRLIQDYLGH 162 + + GAD + +Q+ LG+ Sbjct: 244 QHMLQNGADLKTVQEMLGY 262 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 3/169 (1%) Query: 6 YLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +L E+QA+ A+ + GAR+ +I L Y G+R SE L +D+DL+ + + Sbjct: 116 FLYENEMQAIFDAIDTDSLLGARNLAIIELLYASGIRASECTGLKLKDIDLDLSTLLVMG 175 Query: 65 LKNGFSTVHPLRFDEREAVERWTQER-ANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K P+ EA+ + +R A + ++D +FI+ RG L+ + +I+ Sbjct: 176 -KGKKERFLPVGSFAVEALSLYLDKRTAKFGPHAQSDPLFINYRGGALTDRGLRKILAKV 234 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 +A ++ PH++RH + GAD R +Q+ LGH +++ T YT Sbjct: 235 IEDASLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDLKATQIYT 283 >UniRef50_C1EZT7 Integrase family protein n=1 Tax=Bacillus cereus 03BB102 RepID=C1EZT7_BACC3 Length = 183 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 6/148 (4%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RDY L LL G+R+S LL+L ++D + I++ N + PL +E + Sbjct: 26 RDYFLFLLGINTGLRLSVLLNLKFKDFIIQGKNISL----NVNNIQFPLNASVKECFFTY 81 Query: 87 TQERANWKGADRTDAIFISRRG-SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYE 145 Q R +K D IF SR+G + R AYRI+ +A + G ++ LR GY Sbjct: 82 KQ-RIGYKEPMVEDYIFASRKGHDPIDRSHAYRILSEAAKKVGLSSKVGTSTLRKTFGYH 140 Query: 146 LAERGADTRLIQDYLGHRNIRHTVRYTA 173 ++ D + +Q H + + T++Y Sbjct: 141 FYKKYGDLKYLQKMFNHSSSKQTIKYIG 168 >UniRef50_A1JV48 Recombinase/integrase n=9 Tax=Enterococcus RepID=A1JV48_ENTFC Length = 199 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%) Query: 10 KEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDL-DLNEGRINIRR---L 65 K++ AM + G G R+ L + RIS+L L D+ +++ GR+ ++ + Sbjct: 11 KKIDAMKAILASGKYGQRNLVLFSIGINTAYRISDLRQLKLSDVVEISRGRVIVKERLAM 70 Query: 66 KNGFSTVHPLRFDE---REAVERWTQER--ANWKGADRTDAIFISRRG--SRLSRQQAYR 118 K + H F R+ + + Q + D ++ +F SR+G + L+RQ +R Sbjct: 71 KEQKTAKHNSVFISNKLRKVILDYVQSEFLEQLQAQDFSNYLFPSRKGADTPLTRQSLWR 130 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 II +AG G + + PH +R GY L ++G T +IQ L H + R T+RY Sbjct: 131 IIHEAGTAVG-LKEIGPHSMRKTFGYFLYKQGTKTEIIQSLLNHSSQRETLRY 182 >UniRef50_UPI0001C36B4B phage integrase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B4B Length = 323 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 2/152 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD C+I + + G+RI E+ L+ +D D E I N + + +++W Sbjct: 147 RDMCIIEILFCLGLRIGEVAALNIEDYDSGEASFLIHGKGNKERMLFISSITVNQKLQKW 206 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 + R + D DA+F+++ G RLS + A ++ PH LRH+ +L Sbjct: 207 IRTRQEFNLQD--DALFVNKYGKRLSIYSIENLFYKYRELAHINSEATPHYLRHSFATQL 264 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 GAD R +QD LGH +I T YT + R Sbjct: 265 LNNGADIRAVQDILGHSSIVTTQIYTEVSLKR 296 >UniRef50_B5Y6L6 Tyrosine recombinase XerD n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6L6_COPPD Length = 288 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 17/163 (10%) Query: 21 YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE--GRINIRRLKNGFSTVHPLRFD 78 Y RD + + G+R+SEL L D+ ++E G++ +R K PL D Sbjct: 123 YKEGNERDIAIFEVLANTGIRVSELCSLKLSDVQISERKGKLIVRYGKGQKYREVPLNSD 182 Query: 79 EREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII----RDAGIEAGTVTQTH 134 R+A+ + + RA+ + + +F+ RG L+ +RII RDAG+E Sbjct: 183 ARKALNEYLKSRAD----ENNERLFLGERGP-LTPSGVFRIIKRYARDAGVEVS------ 231 Query: 135 PHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 PH LRH L + GAD +Q LGH N+ T Y + A Sbjct: 232 PHQLRHTFARRLLQSGADIVTVQQILGHANLNTTAVYLKPDYA 274 >UniRef50_B2GFZ3 Tyrosine recombinase XerC n=5 Tax=Bacteria RepID=B2GFZ3_KOCRD Length = 378 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 5/152 (3%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDER-- 80 A ARD+ L+ L Y G RISEL+ L +D + + I + V + ER Sbjct: 212 ALAARDWALLELLYATGARISELVGLDRAHVDRAQHVLTITGKGDKQRRV---PYGERAG 268 Query: 81 EAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRH 140 +A+ W R DA+F+ RG R+ + A R++ DA + + PH LRH Sbjct: 269 DALAVWEHRRPALATERAGDAVFVGARGGRIDPRVARRVVADALNDVPDTSARGPHSLRH 328 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + L + GAD R +Q+ LGH + T YT Sbjct: 329 SAATHLLDGGADLRTVQELLGHATVATTQIYT 360 >UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular organisms RepID=XERC_RALPJ Length = 328 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 16/191 (8%) Query: 10 KEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLH--------YQD---LDLNEG 58 + V M Q A RD + L Y G+R+SEL+ L Y+ LDL Sbjct: 131 QAVALMEQLPGDDAETIRDRAVNELFYSCGLRLSELVSLDMRHVKAGAYESASWLDLEAR 190 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD----AIFISRRGSRLSRQ 114 + + + TV P+ EA+ W RA +D A+F+S RG RL+++ Sbjct: 191 EVQVLGKGSKRRTV-PVGTKATEALAAWLAVRAQLAKSDAAPEDAHALFLSPRGKRLAQR 249 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 Q ++ I AG HPH+LRH+ + + D R +Q+ LGH +I T YT+ Sbjct: 250 QIQLRMKRNAIAAGVPADVHPHVLRHSFATHMLQSSGDLRAVQELLGHASIASTQVYTSL 309 Query: 175 NAARFAGLWER 185 + A ++++ Sbjct: 310 DFQHLAKIYDQ 320 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 244 2e-63 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 240 3e-62 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 239 4e-62 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 238 1e-61 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 237 2e-61 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 237 2e-61 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 235 5e-61 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 235 8e-61 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 234 2e-60 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 233 2e-60 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 233 3e-60 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 232 6e-60 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 232 6e-60 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 231 1e-59 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 231 1e-59 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 231 1e-59 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 230 2e-59 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 230 2e-59 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 230 2e-59 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 230 2e-59 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 230 2e-59 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 229 3e-59 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 229 4e-59 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 229 5e-59 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 229 6e-59 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 228 7e-59 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 228 9e-59 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 227 1e-58 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 227 1e-58 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 227 1e-58 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 227 2e-58 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 227 2e-58 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 227 2e-58 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 226 3e-58 UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobactera... 226 4e-58 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 225 7e-58 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 224 1e-57 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 224 2e-57 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 224 2e-57 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 224 2e-57 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 223 2e-57 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 223 3e-57 UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter ... 223 3e-57 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 223 3e-57 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 223 3e-57 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 222 4e-57 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 222 4e-57 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 222 4e-57 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 222 4e-57 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 222 5e-57 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 222 5e-57 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 222 6e-57 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 221 8e-57 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 221 9e-57 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 221 1e-56 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 221 1e-56 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 221 1e-56 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 221 1e-56 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 221 1e-56 UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria... 221 1e-56 UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteri... 221 2e-56 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 220 2e-56 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 220 2e-56 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 220 2e-56 UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus... 219 3e-56 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 219 5e-56 UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacte... 219 5e-56 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 219 5e-56 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 219 5e-56 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 219 6e-56 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 219 6e-56 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 218 7e-56 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 218 8e-56 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 218 8e-56 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 218 9e-56 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 217 1e-55 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 217 1e-55 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 217 1e-55 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 217 1e-55 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 217 1e-55 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 217 1e-55 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 217 2e-55 UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia Rep... 217 2e-55 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 216 2e-55 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 216 3e-55 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 216 3e-55 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 216 3e-55 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 216 3e-55 UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetob... 216 3e-55 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 216 4e-55 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 216 4e-55 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 216 4e-55 UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae ... 216 5e-55 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 215 5e-55 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 215 5e-55 UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteo... 215 6e-55 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 215 6e-55 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 215 6e-55 UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 215 8e-55 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 214 1e-54 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 214 1e-54 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 214 1e-54 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 214 1e-54 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 214 2e-54 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 214 2e-54 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 214 2e-54 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 213 2e-54 UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ... 213 2e-54 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 213 2e-54 UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteri... 213 3e-54 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 213 3e-54 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 213 3e-54 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 213 3e-54 UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX 212 4e-54 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 212 4e-54 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 212 5e-54 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 212 6e-54 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 212 6e-54 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 212 6e-54 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 212 6e-54 UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobac... 212 7e-54 UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorel... 211 8e-54 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 211 8e-54 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 211 8e-54 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 211 9e-54 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 211 9e-54 UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes Rep... 211 9e-54 UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family ... 211 1e-53 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 211 1e-53 UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 211 1e-53 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 211 1e-53 UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium... 211 1e-53 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 211 1e-53 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 211 1e-53 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 211 1e-53 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 211 1e-53 UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobac... 211 1e-53 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 211 1e-53 UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella fe... 211 1e-53 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 210 2e-53 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 210 2e-53 UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychr... 210 2e-53 UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatu... 210 2e-53 UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcu... 210 2e-53 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 210 3e-53 UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriacea... 210 3e-53 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 210 3e-53 UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular orga... 209 3e-53 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 209 3e-53 UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=unculture... 209 4e-53 UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=... 209 4e-53 UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococca... 209 4e-53 UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetal... 209 5e-53 UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium Re... 209 5e-53 UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 209 6e-53 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 209 6e-53 UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacte... 208 7e-53 UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella den... 208 8e-53 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 208 8e-53 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 207 1e-52 UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithio... 207 1e-52 UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales R... 207 2e-52 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 207 2e-52 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 207 2e-52 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 207 2e-52 UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepI... 207 2e-52 UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneo... 206 3e-52 UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobi... 206 3e-52 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 206 3e-52 UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured mar... 206 3e-52 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 206 3e-52 UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton ... 206 4e-52 UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related... 206 4e-52 UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phy... 206 4e-52 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 206 4e-52 UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula stale... 206 4e-52 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 206 5e-52 UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC 206 5e-52 UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomyc... 205 6e-52 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 205 6e-52 UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter ... 205 7e-52 UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betapr... 205 7e-52 UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vad... 205 8e-52 UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochr... 205 8e-52 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 205 8e-52 UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin... 204 1e-51 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 204 1e-51 UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax... 204 1e-51 UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochlori... 204 1e-51 UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ... 204 1e-51 UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepI... 204 1e-51 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 204 1e-51 UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinom... 204 1e-51 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 204 2e-51 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 204 2e-51 UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga ... 204 2e-51 UniRef50_C7NGY7 Site-specific recombinase XerD n=1 Tax=Kytococcu... 203 2e-51 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 203 3e-51 UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillu... 203 3e-51 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 203 3e-51 UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulos... 202 4e-51 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 202 4e-51 UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacte... 202 4e-51 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 202 6e-51 UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Br... 202 8e-51 UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX 202 8e-51 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 202 8e-51 UniRef50_A5FIL1 Phage integrase family protein n=4 Tax=Flavobact... 201 1e-50 UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desu... 201 1e-50 UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ... 201 1e-50 UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella kore... 201 1e-50 UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia... 201 1e-50 UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae... 201 2e-50 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 201 2e-50 UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Prote... 201 2e-50 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 200 2e-50 UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium ... 200 2e-50 UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collins... 200 2e-50 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 200 2e-50 UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramese... 200 2e-50 UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyc... 200 3e-50 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 200 3e-50 UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium... 199 3e-50 UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera arane... 199 3e-50 UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Ta... 199 4e-50 UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Coryneb... 199 4e-50 UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteria... 199 4e-50 UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillu... 199 4e-50 UniRef50_Q72AD1 Site-specific recombinase, phage integrase famil... 199 4e-50 UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomi... 199 4e-50 UniRef50_A8GFT2 Integrase family protein n=3 Tax=Serratia protea... 199 5e-50 UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collins... 199 5e-50 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 199 6e-50 UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncu... 199 6e-50 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 199 6e-50 UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=... 198 7e-50 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 198 8e-50 UniRef50_Q8XTL6 Tyrosine recombinase xerC 2 n=1 Tax=Ralstonia so... 198 8e-50 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 198 1e-49 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 197 2e-49 UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofil... 197 2e-49 UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase f... 196 3e-49 UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acido... 196 3e-49 UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candid... 196 3e-49 UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae... 196 3e-49 UniRef50_C8N6J9 Tyrosine recombinase XerC n=1 Tax=Cardiobacteriu... 196 3e-49 UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria... 196 4e-49 UniRef50_B8DL21 Integrase family protein n=1 Tax=Desulfovibrio v... 196 4e-49 UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybac... 196 4e-49 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 196 4e-49 Sequences not found previously or not previously below threshold: >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 6/195 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++LT + +++A T RD ++ L Y G+R+SEL L+ +DLDL EG I Sbjct: 106 LPKFLTVDDAFKLVEAPSEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDLKEGLIK 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR----TDAIFISRRGSRLSRQQAY 117 +R K + P+ +EA++++ R + + +FI+ RG R+S +Q Sbjct: 166 VRG-KGKKERIVPVGQKAKEALKKYLAIRQILRIKKKLSLDETPLFINNRGQRISDRQVR 224 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 RI+ G + + PH LRH L GAD R+IQ+ LGH ++ T YT + Sbjct: 225 RIVEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYTHVDLK 284 Query: 178 RFAGLWERNNLINEK 192 ++++++ ++++ Sbjct: 285 HLIEVYDKSHPLSKE 299 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 4/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 ++ +V+A++ + RD ++ L Y GMR++EL++L+ D+DL EG Sbjct: 111 PLPDAISISQVRALLNQPVKSGSSEAKRDKAMLELLYASGMRVTELVNLNVLDVDLKEGF 170 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYR 118 + K + P+ ++++ + + R N A+ A+F++RRG RL+RQ ++ Sbjct: 171 VRCFG-KGRKERMIPIYPQAAQSIQEYLTEIRPNLVRAETEKALFLNRRGDRLTRQGLWQ 229 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I++ EAG PH LRH+ + GAD R +Q+ LGH NI T YT + Sbjct: 230 ILKGYAREAGLDDVVTPHTLRHSFATHMLSGGADLRSVQELLGHANISTTQIYTHLTSEH 289 Query: 179 FAGLWERNNLINE 191 +E+ + + Sbjct: 290 IKRSYEKAHPRAK 302 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 3/196 (1%) Query: 1 MSKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M L KE+++ ++ G R+ ++ Y G+R+SEL++L+ Q++DL E Sbjct: 103 MYLPEVLDPKEIESFLKIPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDLEEKY 162 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + PL E+++R+ R + D+ +A+F++++G R++RQ + I Sbjct: 163 VRCFG-KGEKERIVPLGDYAVESLKRYLSVRHLFNPKDK-EALFLNKKGERITRQGVWFI 220 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G + PH RH+ L GAD R++Q+ LGH +I T YT +++ Sbjct: 221 IKAYSKILGLPKKVSPHTFRHSFATHLLSNGADIRIVQELLGHSDIATTQIYTHIVSSKL 280 Query: 180 AGLWERNNLINEKLKR 195 +++R + + + + Sbjct: 281 HEVYQRAHPLMRRNTK 296 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 4/193 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + LT EV ++ + G RD ++ L Y GMR+SEL+ L DL L G + Sbjct: 106 LPKALTVDEVTQVLNSCDTSTVLGLRDKAMLELLYATGMRVSELITLKLSDLHLELGFLQ 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRT--DAIFISRRGSRLSRQQAYRI 119 K + P+ V+ + + + +F++ RG+ +RQ ++ Sbjct: 166 TIG-KGNKQRIIPIGQAATNWVQHYLTYARVVLEQESNPVEYLFLNHRGNGFTRQGFWKN 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ EAG PH LRH+ + E GAD R++Q+ LGH +I T YT R Sbjct: 225 LKKIVQEAGVHKDVSPHTLRHSFATHILEAGADLRIVQELLGHSDISTTQIYTHLTNERM 284 Query: 180 AGLWERNNLINEK 192 ++++ + +K Sbjct: 285 KEIYQQAHPRAKK 297 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 2/188 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V+A++QA A G RD + + Y G+R+SELL+L + ++L +G + Sbjct: 119 LPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLR 178 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + PL + VER+ E TD +F+++ G +SRQ + I+ Sbjct: 179 ITG-KGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIK 237 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 ++A + PH LRHA L GAD R++Q LGH ++ T YT R Sbjct: 238 HYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQ 297 Query: 182 LWERNNLI 189 L E+++ Sbjct: 298 LHEKHHPR 305 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 2/188 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V+A++ A T G RD + + Y G+R+SELL+L + ++L +G + Sbjct: 119 LPKDLSEQDVEALINAPDISTTLGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGFVR 178 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + PL + +E++ E TD +F+++ G +SRQ + I+ Sbjct: 179 ITG-KGNKERLVPLGQYACDWIEKYLAESRPQLYKSNTDYLFLTQHGGIMSRQNFWYAIK 237 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 ++A + PH LRHA L GAD R++Q LGH ++ T YT R Sbjct: 238 RYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQA 297 Query: 182 LWERNNLI 189 L + + Sbjct: 298 LHHQYHPR 305 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 235 bits (601), Expect = 5e-61, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ +EV +M+ G RD ++ L Y G+R+SELL L +DL+ G + Sbjct: 107 KLPQVLSIEEVDKLMEQPNPVVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLNPTAGFL 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ + V+R+ + R + +F++ RG LSRQ ++I Sbjct: 167 RCMG-KGRKERIIPVNQTSIDWVQRYLARVRNSLVKNPLERTLFLNARGRPLSRQGFFKI 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + +A + PH LRH+ L E GAD R +Q+ LGH +I T YT +R Sbjct: 226 LGNYVEKAELEKEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHLTKSRL 285 Query: 180 AGLWERNNLIN 190 ++++ + + Sbjct: 286 REVYQQYHPRS 296 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 3/195 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + + +++ ++ + + + RD ++ L Y G+R+SEL L D+DL + + Sbjct: 114 LPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGLDLGDMDLAGREVRL 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P+ EA+ RW R +K D +A+F+++RG RLS + +++ Sbjct: 174 LG-KGNKERIVPIGSKALEALNRWLAVRNQFKPQD--NAVFLNKRGGRLSHRSIQLVMQK 230 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 G + G + HPH LRH+ + E D R +Q+ LGH N+ T YT + A + Sbjct: 231 WGEKQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSNLATTQIYTHLDFQHLAKI 290 Query: 183 WERNNLINEKLKREE 197 ++ + ++ K+++ Sbjct: 291 YDAAHPRAKRKKQDD 305 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 3/196 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +LT ++ +++A G RD ++ Y G+R+SEL+ L+ D D + I Sbjct: 119 KLPHFLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWDQDANII 178 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSRLSRQQAYRI 119 + K + P+ +A+ W +ER GA +DA+F++R +RL+ + R+ Sbjct: 179 RVLG-KGRKERIAPIGSFAAKALTHWLEEREAKPGAHPDSDALFLNRLKTRLTSRSVGRM 237 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + ++ G +T PH LRH L + GAD R +Q+ LGH+++ T YT + R Sbjct: 238 LEKYLLQTGLDKKTSPHTLRHTFATHLLDGGADLRSVQELLGHKSLTTTQIYTHVSTKRL 297 Query: 180 AGLWERNNLINEKLKR 195 +E+ + ++ K+ Sbjct: 298 LETYEKAHPHAQRSKK 313 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L EV+ ++ + G RD ++ L Y G+R+SE+++L D+ L+ G I Sbjct: 108 LPKVLALNEVERLLDTPKLTSPFGYRDKAMLELLYATGIRVSEMIELKTADVHLSMGFIR 167 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 K + P+ A+E + + R + +DA+F++ G ++SRQ ++ + Sbjct: 168 CFG-KGRKERIVPIGEAAASAIEEYMTKARGKLLKNNVSDALFLNHHGKQISRQGFWKNL 226 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + +EAG + PH LRH+ L E GAD R +Q+ LGH +I T YT R Sbjct: 227 KKIALEAGIKKELTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLK 286 Query: 181 GLWERNNLIN 190 ++++ + Sbjct: 287 DVYKQFHPRA 296 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 233 bits (594), Expect = 3e-60, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 4/193 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M + L+ EV + +A G RD ++ + Y GMR+SELL L ++L Sbjct: 107 MVLPKVLSVDEVNRLFEAPDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHY 166 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRT-DAIFISRRGSRLSRQQAY 117 + I K + PL E ++ + + R ++ +R D +F++ RG+ ++RQ+ + Sbjct: 167 V-IAYGKGAKERLIPLGHYAIEYLKEYLSRVRPHFVKENRPCDDLFLTIRGTGMTRQRFW 225 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 ++I++ G++ PH+LRH+ + + GAD R +Q+ LGH +I T YT Sbjct: 226 QLIKNYGLKVHIAKSLTPHILRHSFATHMLDNGADLRTVQELLGHSDISTTQIYTHLTNH 285 Query: 178 RFAGLWERNNLIN 190 R ++++++ Sbjct: 286 RLKAIYDKSHPRA 298 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ KEV+ +++ C G RD ++ L Y G+R+SEL+ L D++L Sbjct: 108 KLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDVNLEMQ-- 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 IR K + P+ A++ + + R A+F++ G RL+RQ ++I Sbjct: 166 YIRCNKGARERIVPIGSVSVNALQEYLTKSRNLLIQRPDEKALFVNVNGKRLTRQGFWKI 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ +A PH LRH+ L E GAD R IQ+ LGH +I T Y R Sbjct: 226 IKQYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQLAKNRI 285 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 286 KEIYKKTHPRA 296 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + ++ +EV+ + A G RD ++ + Y GMR+SELL L ++L + Sbjct: 112 LPKVMSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYV- 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANW-KGADRTDAIFISRRGSRLSRQQAYRI 119 I K + PL + ++++ Q R + K D++F++ RG+ ++RQ+ ++I Sbjct: 171 IAYGKGAKERLIPLGQYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQI 230 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 IR G++AG PH+LRH+ + + GAD R +Q+ LGH +I T YT R Sbjct: 231 IRAYGVKAGLQKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTNNRL 290 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 291 KKVFDKTHPRA 301 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L +V+ ++ + G RD ++ + Y G+R++EL+ L DL L+ G I Sbjct: 108 LPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLHLHMGFIQ 167 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGAD-RTDAIFISRRGSRLSRQQAYRI 119 K + PL +E++ +E R + R D +F++ G L+RQ ++I Sbjct: 168 TIG-KGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKI 226 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ E+G PH LRH+ L E GAD R +Q+ LGH +I T YT R Sbjct: 227 LKGIAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKLRL 286 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 287 KDVYKQFHPRA 297 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 3/192 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +LT EV +++ G RD + L Y G+R+SEL+ L ++LDL+ +I Sbjct: 107 LPEFLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDLHSHQIR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + ++++ + R KG T A+F++ G RLS + + Sbjct: 167 VWG-KGSKERIVLMGLPAIQSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSARSFQERL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +AG HPHMLRH L + GAD R++Q+ LGH N+ T YT ++ Sbjct: 226 DKLAHQAGIEKHVHPHMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYTHVTKSQAR 285 Query: 181 GLWERNNLINEK 192 ++ ++ + + Sbjct: 286 KVYMSSHPLAKP 297 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 3/189 (1%) Query: 4 RRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +YL +E++ ++QA G RD ++ + Y G+R+SEL L DLDL + Sbjct: 115 PKYLNLEEIERIIQAPDLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLDLEYQVLRT 174 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + P+ AV + + R + +F++ RG ++RQ ++++ Sbjct: 175 TG-KGNKQRLVPVGKAAVLAVRAYLESGRPGLLKGRASRYLFVTARGGCMTRQGFWKLLA 233 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G +AG PH+LRH+ L E GAD R +Q LGH +I T YT +R Sbjct: 234 AYGRKAGIFHGLTPHVLRHSFATHLLEGGADLRSVQVMLGHADISTTQIYTHVMRSRLRA 293 Query: 182 LWERNNLIN 190 E+++ Sbjct: 294 TVEKHHPRA 302 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 4/192 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + + L EV+ ++ + RD ++ L Y G+R+SEL+ L D++ G I Sbjct: 106 LRLPKALEIDEVKRLLSVMLESKYYLRDIAMLELMYASGLRVSELVRLKLSDINFEAGFI 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 ++ K V P+ + ++ + + R ++ +F++ RG ++RQ+ ++ Sbjct: 166 RVKG-KGDKERVVPIAQRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQPMTRQRFWQN 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G AG PHM+RH+ L E GAD R +Q LGH +I T YT + R Sbjct: 225 IKAIGRIAGV--NVTPHMIRHSFATHLLEGGADLRSLQKMLGHSDISTTQIYTKVSMDRL 282 Query: 180 AGLWERNNLINE 191 + +++ + Sbjct: 283 RKEYLKHHPRAK 294 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 13/197 (6%) Query: 6 YLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 L+ EV ++++ G ARD ++ L Y G+R+SEL L LDL +G + + Sbjct: 142 VLSVDEVFSLLEMPGAGDRFAARDRAILELLYATGLRVSELAGLDLAQLDLADGMVRVVG 201 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANW-----------KGADRTDAIFISRRGSRLSR 113 K + P+ A+E + +R K A D + ++ RG RL+ Sbjct: 202 -KGNKERLVPMGTAAVAAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLVNSRGGRLTS 260 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + R+++ AG + PH LRH+ L E GAD R++Q+ LGH ++ T RYT Sbjct: 261 RSIERLVKMYAERAGIAARVSPHALRHSFATHLLEMGADLRVVQELLGHASLSTTQRYTH 320 Query: 174 SNAARFAGLWERNNLIN 190 N ++++ + + Sbjct: 321 LNLDHLTAVYDQAHPLA 337 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+G E+ A+M G RD + L Y G+R+SE++ L L L + Sbjct: 105 LPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAMNLLQ 164 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ + V R+ QE R + A+F++ G L+RQ ++ + Sbjct: 165 VTG-KGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQVIWKNL 223 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + G PH LRH+ L E GAD R++Q+ LGH +I T YT + Sbjct: 224 KAYIASVGIEKDVTPHTLRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLV 283 Query: 181 GLWERNNLI 189 ++ + + Sbjct: 284 AVYHKTHPR 292 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L EV A+++ G RD ++ L Y GMR+SEL+ L ++++L G + Sbjct: 106 KLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNLIMGFV 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + PL E + + + R T+ +F++ G LSRQ +++ Sbjct: 166 RVFG-KGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKM 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G++A PH LRH+ L E GAD R +Q+ LGH +I T YT + ++ Sbjct: 225 IKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQI 284 Query: 180 AGLWERNNLIN 190 ++ + + Sbjct: 285 RKMYNQFHPRA 295 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 6/193 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S + L+ +V++++ A A G RD ++ + Y G+R+SEL++L + ++LN G + Sbjct: 120 SLPKDLSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLRVSELMNLSLEQVNLNAGWL 179 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA----NWKGADRTDAIFISRRGSRLSRQQA 116 I K + + PL +A++ + + A+F++ +G ++RQ Sbjct: 180 QITG-KGNKTRLVPLGEYASDALDDYLTHARGELVAHLKSGNCQAVFLTTQGGYMTRQNF 238 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 + +I+ +AG + PH LRHA L GAD R +Q LGH ++ T YT Sbjct: 239 WYMIKKYAKQAGIQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQIYTHVAT 298 Query: 177 ARFAGLWERNNLI 189 AR L E ++ Sbjct: 299 ARLQQLHEAHHPR 311 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 229 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 3/191 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M L+ +E+ ++ + RD ++ L Y G+R+SEL+ L ++ G Sbjct: 106 MRLPDTLSHEEMDQLLSQPGVRTDSAIRDTAMLELMYATGLRVSELISLTTGSINWQVGY 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYR 118 + ++ K + P+ E V R+ E R +T+ +F+++ G ++RQ ++ Sbjct: 166 LVVQG-KGNKERIVPIGQVAYEHVRRYFDEVRPKCIRGAQTNVLFLNKSGQGMTRQGFWK 224 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 ++R ++AG + HPH RH+ L E GAD R +Q LGH +I T YT Sbjct: 225 LVRKYAVKAGLQKKVHPHTFRHSFASHLLEGGADLRSVQMMLGHADISTTQIYTHVTREH 284 Query: 179 FAGLWERNNLI 189 + ++ + Sbjct: 285 LKDIHKKYHPR 295 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 5/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 S LT ++V +++A RD +I L Y GMRISE L+L +D N Sbjct: 135 SLPHALTVEQVNRLIEACPVNESSNPIALRDRAVIELLYGTGMRISEALNLDIDSIDRNH 194 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 + + K + P+ A++ W A+F++ RG+RL RQ + Sbjct: 195 AYVRVVG-KGRKERLVPIGAPALHAIDAWLVRGRPSMVKRSDKALFLNARGNRLGRQSVW 253 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 + + A G PH LRH+ L + GAD R +Q+ LGH ++ T YTA + Sbjct: 254 KFLHAAAERCGLGDSVGPHTLRHSYATHLLQGGADIRAVQELLGHASVTTTQIYTAVSID 313 Query: 178 RFAGLWERNNLIN 190 ++ ++ Sbjct: 314 NLREVYATSHPRA 326 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 229 bits (584), Expect = 5e-59, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 7/190 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +++ + + ++ +G RD ++ Y GMR+SEL+ ++ D+D + G + Sbjct: 115 KLPGFMSVNDTEILLNQPDTCNLSGLRDKAIMETLYSTGMRVSELVGINIADIDFHSGIV 174 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K + P+ A++ + ++R +A+F+++ RL+ + R+I Sbjct: 175 KVRG-KGSKERILPVGNHALNAIQLYLEKRKA-----DNEALFLNKFHGRLTERSVARMI 228 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +A + PH RH+ L + GAD R +Q++LGH ++ T YT R Sbjct: 229 EKYMKKAAMHLRVSPHTFRHSFATHLLDNGADLRAVQEFLGHSSLSTTQIYTHVTTERLK 288 Query: 181 GLWERNNLIN 190 ++++ + Sbjct: 289 QVYDKTHPRA 298 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 3/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + LT E++A++ T G R+ L+ Y G R+SE+ +L DL G I Sbjct: 113 LPQVLTATEIEAVLAVPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLHDELGLIT 172 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 K + P+ + ++ +E R + +F++ G R+SRQ ++++ Sbjct: 173 TIG-KGQKQRIVPIGEMSLLYISKYFKESRPILLKDKESPYLFLNDHGHRISRQGIFKLV 231 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++ I+AG PH LRH+ L E GAD R++Q+ LGH +I T YT + Sbjct: 232 KEIAIKAGIDKDISPHTLRHSFATNLLENGADLRIVQELLGHSDISTTQIYTHVSQKHIR 291 Query: 181 GLWERNNLINE 191 + R + + Sbjct: 292 EQYNRFHPRAK 302 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 228 bits (583), Expect = 7e-59, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 97/191 (50%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V ++++A RD ++ L Y G+R++EL+ L +++ L +G + Sbjct: 131 LPKDLSEEQVDSLLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVR 190 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K G + P+ + + +E + ++ R G + +D +F S+R +++RQ + I Sbjct: 191 VIG-KGGKERLVPMGENAVDWIETFIEQGRPQLLGDNSSDVVFPSKRAKQMTRQTFWYRI 249 Query: 121 RDAGIEAGTVTQT-HPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + AG T+ PH+LRHA L GAD R++Q LGH ++ T YT R Sbjct: 250 KHYSVIAGIDTELLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERL 309 Query: 180 AGLWERNNLIN 190 + +++ Sbjct: 310 KQIHAQHHPRA 320 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 228 bits (582), Expect = 9e-59, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 2/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L ++ +++ RD ++ L Y G+RISEL+ + QD+ G I Sbjct: 124 PLPKNLDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANLQDISAANGEIL 183 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 +R K + P+ A+++W R + D A+F+S + +R+S +Q ++ Sbjct: 184 VRG-KGNKERLIPVGSKALNALKKWLIIRPQFANPDEV-AVFLSSKKNRISVRQVRLRMQ 241 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + GI+ G +Q HPH LRH+ + E D R +Q+ LGH ++ T YT + A Sbjct: 242 EWGIKQGISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQHLAK 301 Query: 182 LWERNNLINEK 192 +++ + +K Sbjct: 302 VYDNTHPRAKK 312 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 227 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 4/188 (2%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 LT +E ++ A G RD ++ L Y GMR+SEL+ + D+++ G + Sbjct: 118 PEILTLEETVQLLNQPELDSAKGIRDKAMLELLYATGMRVSELISMKLTDVNMAMGYVLC 177 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 R V P + +A++R+ +E R+ ++ +F++ G +SRQ ++II+ Sbjct: 178 RDS--DKERVIPFGTEAEKALKRYLEESRSVLLKGKESEFLFVNCSGKSMSRQGFWKIIK 235 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +AG PH LRH+ G L + GAD R +Q+ +GH +I T Y N R Sbjct: 236 FYSAQAGITKDITPHTLRHSFGAHLVQNGADLRAVQEMMGHSDISTTQIYMDMNVRRVRE 295 Query: 182 LWERNNLI 189 ++ + + Sbjct: 296 IYAKAHPR 303 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 227 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 1/191 (0%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ +V ++ RD ++ Y G+R+SEL+++H D+D NE + Sbjct: 103 KLPQTLSIDQVFNLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTNEQTLK 162 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + PL EA++ W +R + +F++++G +L+ + ++ Sbjct: 163 VLG-KGNKFRIVPLGRKAIEALDLWILQRNKLNKLVDDEFLFLNQQGKKLTARAIQYRLK 221 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + HPH+LRH+ + + D R +Q+ LGH NI T YT + + Sbjct: 222 FWAQKNNIPENIHPHLLRHSFASHVLQSSQDLRAVQELLGHSNISTTQIYTHLDFQHLSK 281 Query: 182 LWERNNLINEK 192 ++++ + ++K Sbjct: 282 IYDQAHPRSKK 292 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 227 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ +EV+ ++ C G RD ++ L Y G+R+SEL+ L+ D++ + G Sbjct: 106 KLPQILSTQEVELLLDQPKCLDLKGIRDKAMLELLYATGIRVSELISLNLDDINFDLG-- 163 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRI 119 I+ K P+ AV + ++ N+ D + A+F++ G RL+RQ ++I Sbjct: 164 LIKCNKGTRERTIPIGSISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQGFWKI 223 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ +A PH LRH+ L E GAD R IQ+ LGH +I T Y + Sbjct: 224 IKHYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQIAKNKI 283 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 284 KDVYKKTHPRA 294 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 2/190 (1%) Query: 4 RRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L E++ +++ + G RD + L Y G+R+SE + L +D+D + ++I Sbjct: 114 PEFLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVDFADNILHI 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P +E + + ++ + A+F+++RG +L+ + ++ Sbjct: 174 HG-KGDKERLVPFYDLAKELLVSYIKDVRDVWATSDETALFVNQRGKKLTTRGVQYLMNK 232 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 A + HPHM RH+ L + GAD R +Q+ LGH ++ T Y + R Sbjct: 233 AVEKCDLHVHVHPHMFRHSFATHLLDNGADLRYVQELLGHSSLSTTQIYVHVSKERLKAA 292 Query: 183 WERNNLINEK 192 +E + ++ Sbjct: 293 YEHAHPRAKE 302 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + ++ ++V A++ A RD ++ L Y G+R++EL+ L +++ L +G + Sbjct: 116 LPKDISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVR 175 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K G + P+ + + +E + ++ R G +D +F S+R +++RQ + I Sbjct: 176 VTG-KGGKERLVPMGENAIDWIETFIKQGRPALLGETSSDVVFPSKRARQMTRQTFWHRI 234 Query: 121 RDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + AG PH+LRHA L GAD R++Q LGH ++ T YT R Sbjct: 235 KFYAVIAGIDTDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERL 294 Query: 180 AGLWERNNLIN 190 + +++ Sbjct: 295 KQIHSQHHPRA 305 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 9/197 (4%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDL-----DLN 56 + +T EV +++A ATG RD L+ Y G RISE + L D+ D Sbjct: 164 LPKAITVDEVTRILEAAGTDTATGLRDRALLEFLYSTGARISEAVGLDVDDISLAGDDTE 223 Query: 57 EGRINIRR-LKNGFSTVHPLRFDEREAVERWT-QERANWKGADR-TDAIFISRRGSRLSR 113 +G +R K + PL A+E + + R + T A+F++ RG R+SR Sbjct: 224 QGPAIVRLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKGKGTPALFLNARGGRISR 283 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 Q A+ I++ A +A PH LRH+ L E GAD R++Q+ LGH ++ T YT Sbjct: 284 QSAWTILKVAAEKANITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTL 343 Query: 174 SNAARFAGLWERNNLIN 190 A ++ + Sbjct: 344 VTADTLREVYAAAHPRA 360 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 14/191 (7%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG--------ARDYCLILLAYRHGMRISELLDLHYQDL 53 S + LT KEV++++ AV RD ++ Y G+RISEL+ L +D+ Sbjct: 138 SLPKSLTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRISELVKLQKKDI 197 Query: 54 DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 D +E I +R K + + R+ ++ + + + +++ +FI++ G +L+ Sbjct: 198 DFDERTIRVRG-KGEKDRIVLFDENTRDLIDNYIETQNQ-----KSEYLFINKNGRKLTP 251 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + +I++ +AG + PH+LRH+ L + G D R+IQ LGH ++ T YT Sbjct: 252 RYVQMMIKEYAEKAGIKKKVTPHVLRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQIYTN 311 Query: 174 SNAARFAGLWE 184 + +++ Sbjct: 312 VDMDTIKSVYD 322 >UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobacteraceae RepID=B8FH24_DESAA Length = 315 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 10/200 (5%) Query: 2 SKRR-----YLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDL 55 KR+ +LT E A++ ++ + GARD + Y G+R+SEL L+ ++ Sbjct: 118 PKRKKTVAAHLTVDEAFALLDSILDDSLAGARDRAMFECLYSTGIRVSELAGLNMGRVNF 177 Query: 56 NEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD--AIFISRRGSRLSR 113 + + + K + P+ E ++ + ++R +G D A+F+++ G RL+ Sbjct: 178 SGKTLRVLG-KGDKERIVPVGAKALEHIKAY-RDRLAVEGPKNPDPEAVFLNKNGGRLTT 235 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + RI+ + G PH LRH + + GAD R +Q+ LGH +I T RYT Sbjct: 236 RSIRRILEKIVRDMGLNRPLSPHGLRHTFATHMLDNGADLRSVQELLGHASISTTGRYTH 295 Query: 174 SNAARFAGLWERNNLINEKL 193 + R +++ + EK Sbjct: 296 VSIDRLMAAYDKAHPRGEKS 315 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 5/187 (2%) Query: 7 LTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L KE+ ++ G RD ++ Y GMR+SEL++L QDL + G + + Sbjct: 115 LNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQDLHEDLGLVRVLG- 173 Query: 66 KNGFSTVHPLRFDEREAVERWTQERAN---WKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P+ ++++ +E + K + IF++ R +L+RQ +++I+ Sbjct: 174 KGSKERLIPISSVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLTRQAIWQMIKK 233 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 AG PH LRH L E GAD R++Q+ LGH +I T YT + + Sbjct: 234 YCQSAGITKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYTNLSQKHILQV 293 Query: 183 WERNNLI 189 +++ + Sbjct: 294 YQKTHPR 300 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 4/188 (2%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT EV ++ ++ R+ ++ L Y G+R+SEL++L + D++L + + Sbjct: 109 LPDILTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDINLEDCFLR 168 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + P + + + ++R D IFISR G +LSR + +R ++ Sbjct: 169 IIG-KGSKERLVPFGNKAKFFISIYLKKRRPCLNV--NDHIFISRLGKKLSRIEFWRQLK 225 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G PH LRH+ L + GAD R +Q+ LGH +I T YT + R Sbjct: 226 NIAKNVGINKNITPHTLRHSFASHLLKGGADIRFVQEMLGHASITTTQIYTHLDEDRIVQ 285 Query: 182 LWERNNLI 189 ++ + Sbjct: 286 QHKKFHPR 293 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 4/196 (2%) Query: 4 RRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + L + +++ + G RD L+ + Y G+R+SE L L + +DL++ + + Sbjct: 117 PKVLNVDQAIHLVETEITLDPEGLRDLALLEVLYGSGLRVSEALGLDFAHVDLDQKLVRV 176 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + PL E + R+ ++R + A R A+F+ +RG RLSR+QA RI+++ Sbjct: 177 LG-KGRKERLVPLTGPAAERLARYIEQRGAFAPAAREQAVFLGKRGGRLSRKQADRIVKE 235 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 + +G PH LRH+ + + GAD R +Q+ LGH I T RYT + A+ + Sbjct: 236 MAVRSGAPCSISPHTLRHSFASHMLQAGADLRSVQELLGHSRISTTQRYTHLDLAQVMRV 295 Query: 183 WERNNLINEKLKREEV 198 ++ + + K++E+ Sbjct: 296 YDAAHPLA--AKKDEI 309 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++LT KE++ ++QA G RD ++ L Y G+R+SEL+ L + +I Sbjct: 115 LPQFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSELISLKLESYYPEHFQIK 174 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K P+ +EA++++ E R +F+++RG L+R + ++I Sbjct: 175 VLG-KGNKERAVPIGKCAKEALDKYIAEGRTKLLAKKTRGEVFLNQRGQPLTRSRIRQLI 233 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 G + +PH+LRH L E GAD R+IQ+ LGH NI T YT N Sbjct: 234 IHYARLGGIDKKVYPHLLRHTFASHLVENGADLRVIQELLGHANIATTQIYTHVNLKHLK 293 Query: 181 GLWERNNLIN 190 + R + + Sbjct: 294 EIHRRCHPRS 303 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 3/186 (1%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT +E+ ++ A G A RD L+ L Y G+R+SEL L Q +DL G + + Sbjct: 128 LTEEEIARLLAAPTGGDARALRDRALLELFYSSGLRVSELAGLLLQQVDLEHGFLRVFG- 186 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K V P+ EA+ + R ++ + +F+++ G LSR + +++ Sbjct: 187 KGAKERVVPIGGKAIEALATYLTAGRPHFVRSRTGSQLFLNKNGGPLSRVMLWMLVKKYA 246 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 AG PH LRH+ L GAD R IQ+ LGH +I T YT+ + R + Sbjct: 247 KRAGLTKNVKPHGLRHSFATHLLSGGADLRAIQEMLGHASISTTQIYTSVESQRLLEQHD 306 Query: 185 RNNLIN 190 + + N Sbjct: 307 KFHPRN 312 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT +E + +++A G RD ++ L Y G+R+SEL+ L+ D++L + Sbjct: 106 KPPQTLTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSELISLNKDDVNLELHFL 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRGSRLSRQQAYR 118 + + P E ++ + +E + D A+F +RRG R+SRQ ++ Sbjct: 166 RCTGERG-KERILPFGGVTAEWLDLYLREGRSHLILDERENPALFPNRRGGRISRQGFWK 224 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ G EAG + PH LRH+ L ERGAD R +Q+ LGH + Y + + + Sbjct: 225 LMKKYGQEAGITSDITPHTLRHSFAVHLLERGADVRSVQELLGHSDASTIQMYVSRSRSN 284 Query: 179 FAGLWERNNLI 189 +++ + Sbjct: 285 LKTVYDAFHPR 295 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 8/182 (4%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 +YL+ EV+ +++A RDY +I L G+R+SEL +L +D+D NE + + Sbjct: 106 PKYLSEDEVKRLIEASSENP---RDYAIISLLAYSGLRVSELCNLKIEDVDFNERIVYVH 162 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + + EA++ + R D + +F S++ +++SR Q +RI++ Sbjct: 163 SGKGDKDRIVVVSPRVIEALQNYLYTRE-----DDMEYLFASQKSNKISRVQVFRIVKKY 217 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 +AG + PH+LRH L RG D R IQ +LGH ++ T YT + A ++ Sbjct: 218 AEKAGIKKEVTPHVLRHTLATTLLRRGVDIRFIQQFLGHSSVATTQIYTHVDDALLKSVY 277 Query: 184 ER 185 ++ Sbjct: 278 DK 279 >UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXM2_DICNV Length = 297 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 8/196 (4%) Query: 2 SKRRYL----TGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 RR+L + +V+A++ A G RD ++ L Y G+R+SEL+ L + L+ Sbjct: 103 KIRRHLPQTMSESDVEALLSAPDVQTILGLRDRAMLELLYACGLRVSELVGLTLHQIALD 162 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQ 115 G + I K + P E ++R+ QE R G +D +F+S+RG+ LSRQ Sbjct: 163 VGYVQILG-KGDKERLVPFGEIAHEWLQRYIQEARPQLLGQKMSDYVFVSQRGAALSRQA 221 Query: 116 AYRIIRDAGIEAGTVT-QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 + ++ G + + PH LRHA L GAD R IQ LGH ++ T YT Sbjct: 222 FWYRLKVYVCAVGLDSNKISPHTLRHAFASHLLAHGADLRSIQMLLGHSDLSTTQIYTHI 281 Query: 175 NAARFAGLWERNNLIN 190 R L+ +++ Sbjct: 282 ADQRLKSLFMKHHPRA 297 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 3/196 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EV ++++ + T G R+ L+ L Y G+R+SELL++ +D+ + + + Sbjct: 107 TLPTVLSVDEVISILEVIDKSTTLGLRNMALLELIYGSGLRVSELLNIKLKDIHMQQSYV 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ A+ + + + ++TD +FI+ +G LSR ++++ Sbjct: 167 IVTG-KGSKERMVPISDMAIIAIRNYLVKARDDLIKEKTDYLFINNQGKTLSRVGFFKVL 225 Query: 121 RDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + EA + PH LRH+ L E G D R +Q+ LGH +I T YT + +R Sbjct: 226 KKLASEANLDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTHISQSRL 285 Query: 180 AGLWERNNLINEKLKR 195 ++ + + ++ + Sbjct: 286 KQVYNKTHPRAKENNK 301 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 14/196 (7%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG--------ARDYCLILLAYRHGMRISELLDLHYQDL 53 S + L EV++++ AV G RD ++ L Y G+R+SEL+ L D+ Sbjct: 122 SLPKSLNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRVSELVSLRINDI 181 Query: 54 DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 D +E I IR K + + R+ + + + R + ++ +F++R G L+ Sbjct: 182 DPDERTIRIRG-KGDKDRIVLFDENTRDLLMDYLKRRIH-----ESEYLFLNRFGDPLTP 235 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + +I++ +AG + PH+LRH+ L + G D R IQ LGH N+ T YT+ Sbjct: 236 RYVQMMIKNYARKAGIKKKVTPHILRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQIYTS 295 Query: 174 SNAARFAGLWERNNLI 189 + +++R L+ Sbjct: 296 VDMQTLKNVYDRARLL 311 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 222 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 7/195 (3%) Query: 2 SKRRYLTGKEVQAMMQAV---CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 + L+ EV ++ A R+ ++ L Y G+R++EL L +D G Sbjct: 147 PLPKTLSESEVSCLLSAAERRGDEPLALRNLAMVELFYASGLRVAELCGLDLGSVDAGLG 206 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADR--TDAIFISRRGSRLSRQQ 115 + + K G + P+ EA+ R+ ++ R R + A+F++ RG RLS + Sbjct: 207 YVRVLG-KGGKERIVPVGEQALEAISRYLKQGRPALARRQREVSPALFLNHRGRRLSVRG 265 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A I+ A PH LRH L + GAD R +Q+ LGH + T YT + Sbjct: 266 AQDILSRIADGAALERGISPHTLRHTFATHLLDGGADLRSVQEMLGHAKLSTTQIYTHVS 325 Query: 176 AARFAGLWERNNLIN 190 A R ++ + + Sbjct: 326 AERLKEIYHKTHPRA 340 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 222 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L G E+ +++A G RD ++ Y G+R+SEL+ ++ +DLDL+EG + Sbjct: 108 KLPHFLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDLDLDEGVV 167 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA-----------NWKGADRTDAIFISRRGS 109 IR K + PL A+++W R + A +F ++ G Sbjct: 168 RIRG-KGSKERLAPLGSFALRAIKKWLAHRKLASISVSSTRKSASKAGHGTPVFTNKFGK 226 Query: 110 RLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTV 169 RL+ + R++ G +T PH LRH L +RGAD R +Q+ LGH+++ T Sbjct: 227 RLTTRSVARMLEKYLKLTGLDLRTTPHTLRHTFATHLLDRGADIRSVQELLGHKSLVTTQ 286 Query: 170 RYTASNAARFAGLWERNNLIN 190 YT + A ++ER + Sbjct: 287 IYTHVSTAALKAVYERAHPRA 307 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 222 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 5/196 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L E +++ G RD L+ L Y G+R+SEL L ++DLDL+ G + Sbjct: 132 KLPQVLDADEAVRLVEVPTDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLDSGLVT 191 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K G + P+ A+ W ++ G +F R G +S++ I+ Sbjct: 192 VLG-KGGKQRLVPVGSHAVAALRAWQRD----SGGSAQTHVFPGRAGGAISQRAVQIRIK 246 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G HPHMLRH+ + E D R +Q+ LGH +I T YT + A Sbjct: 247 QLAVRQGMFKHVHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQHLAK 306 Query: 182 LWERNNLINEKLKREE 197 +++ + ++ K E Sbjct: 307 VYDAAHPRAKRKKATE 322 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 222 bits (567), Expect = 4e-57, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 3/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S YLT E++ + ++ RD C+ L Y G+RISE +L D+DL + Sbjct: 109 SIPDYLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDMDLEGMTL 168 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K G + P + + R+ Q R + + +F+S++GS ++R+ +R+ Sbjct: 169 TVEG-KGGRQRLVPFGEKSLDILNRYLKQSRPFILKSRNCEYLFVSKKGSYINRKSVWRL 227 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + + PH LRH+ L E AD + +Q+ LGH +I T YT Sbjct: 228 LNHYIKRTSILKKVTPHTLRHSFATHLLENHADLKSVQELLGHIDIATTQIYTHMANKTL 287 Query: 180 AGLWERNNLI 189 + ++ + Sbjct: 288 REVHKKFHPR 297 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 6/193 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG----ARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 S + L+ EV A++++ RD L+ + Y G R+SELL L D+D E Sbjct: 112 SIPKALSIAEVTAILESCPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVDPTE 171 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 I +R K V P+ +A++ + + A+F++R G R+ RQ A+ Sbjct: 172 KLIIVRG-KGSKERVVPVGDPALDALQHYLVRVRPAFNKKGSAALFLNRNGGRMGRQSAF 230 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 ++ +AG PH RH+ L E GAD R++Q+ LGH N+ T YT + Sbjct: 231 NMVSSVSEKAGVAG-VSPHSFRHSFATHLLEGGADIRVVQELLGHSNVVTTQIYTKVSPD 289 Query: 178 RFAGLWERNNLIN 190 W ++ + Sbjct: 290 HLREAWSESHPRS 302 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 2/193 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + + T +EV+ ++ + G R+ ++ Y G+RISEL + QD+DL G Sbjct: 107 VPLPKCFTEEEVRTLLSIPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDIDLKRGL 166 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K + PL EA+ + + R + + D +F+++ G +Q I Sbjct: 167 VRVTG-KGNKQRIVPLGSYAIEAINNYLKVRPQFMRENSPDLLFLTKSGKAFDTKQLDII 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ PH LRH+ L RGAD R IQ+ LGH + T YT + Sbjct: 226 LKRYFELVAKAKGYSPHSLRHSFATHLLSRGADLRAIQELLGHSLLSTTETYTHISLEDI 285 Query: 180 AGLWERNNLINEK 192 +++ + +++ Sbjct: 286 KEAYKKGHPRSKE 298 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 2/194 (1%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +LT ++ + + R+ ++ Y G+R+SE+ L +LDLNE + + Sbjct: 127 PEFLTFDQMMTLFDSFDLNDPAALRNRAILETMYACGLRVSEVCSLTLAELDLNERILTV 186 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P R + R+ ++ + +F+S+RG+ ++ + I+ Sbjct: 187 TG-KGDKQRIVPFYKRLRTLLTRYLRDSRALYLKEEHGFVFVSQRGAPITPRAVQLILAQ 245 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 AG +AG HPH+LRH+ L + G D R +Q+ LGH ++ T YT R Sbjct: 246 AGQDAGLNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYTHVTVDRLKQS 305 Query: 183 WERNNLINEKLKRE 196 + + ++ + ++ Sbjct: 306 VDAAHPHSKSVLKK 319 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 221 bits (565), Expect = 8e-57, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 7/191 (3%) Query: 4 RRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ E+ ++ G RD ++ L Y G+R+SEL ++ +D+D ++G I I Sbjct: 115 PAVLSVDEIFVLLNLPFPEDVFGLRDRAILELFYSSGIRVSELTGINEEDMDFSQGLIRI 174 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR-----TDAIFISRRGSRLSRQQAY 117 R K + P+ EAV+R+ ++ + + + +F++RR RLS + Sbjct: 175 RG-KGKKERIVPIGQPASEAVQRYMMKKPGSETSGKAVATCPVPLFVNRRQGRLSARSVA 233 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 RI+ +G Q PH LRH+ L + GAD R IQ+ LGH ++ T +YTA + Sbjct: 234 RILSKYVSMSGLQKQISPHTLRHSFATHLMDAGADLRSIQELLGHESLSTTQKYTAVSVN 293 Query: 178 RFAGLWERNNL 188 R +++R + Sbjct: 294 RLMAVYDRAHP 304 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 7/193 (3%) Query: 5 RYLTGK----EVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 RYL +V +++ + A G RD L+ L Y G+R+SEL++ ++LDL+ Sbjct: 124 RYLPETMNELQVDRLLEGISIDAPRGLRDRALLELLYASGLRVSELVNARLENLDLDARI 183 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYR 118 I + K + P+ +A+ + + ER G +F+S RG++L+ + ++ Sbjct: 184 IRVTG-KGNKMRLVPVGQKACDAIRAYLEKERPEMVGKKTGSEVFLSSRGTKLTTVRIWQ 242 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I++ AG +PH+LRH+ L GAD R+IQ+ LGH +I T YT + R Sbjct: 243 IVKACAKNAGLDINVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQIYTHVDQQR 302 Query: 179 FAGLWERNNLINE 191 + R + + Sbjct: 303 LKAVHHRFHPRAK 315 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 3/186 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 +S ++ KE++ ++ +V G R+ ++ Y G+R+SEL+ + ++++L Sbjct: 38 LSLPEVISSKEMELLIDSVDTKNPRGLRNAAMLETLYGAGLRVSELVSMKMENINLEASF 97 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYR 118 I I K + P+ E V W R + +F++R G ++RQ ++ Sbjct: 98 IRIFG-KGSKERIVPIGSFAIEKVRNWIMHGRPIILKNIPSHYLFVARAGKPMTRQGFWK 156 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ +G + PH RH+ L E GAD R +Q LGH +I T YT + Sbjct: 157 LLKKYSRASGISKKITPHTFRHSFATHLLEGGADLRSVQTMLGHSDISTTQIYTHVSRDY 216 Query: 179 FAGLWE 184 + Sbjct: 217 LRKCIK 222 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 2/195 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L EV +++ RD ++ L Y G+R++EL+D+ +D+ L G I Sbjct: 118 PLPKNLDVDEVNQLLEVNEDDPLAIRDRAIMELMYGAGLRLAELVDIDVRDVHLRSGEIR 177 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K P E V +W + R+ A+F+S+ G+R+S + + + Sbjct: 178 VIG-KGNKERKVPFAGMAVEWVGKWLKVRSGLAD-PSEPALFVSKLGTRISHRSVQKRMA 235 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G + + PH LRH+ + E + R +Q+ LGH NI T YT + A Sbjct: 236 EWGQKQAVASHITPHKLRHSFATHILESSNNLRAVQELLGHENISTTQIYTHLDFQHLAD 295 Query: 182 LWERNNLINEKLKRE 196 ++++ + K + Sbjct: 296 VYDQAHPRARKKSSQ 310 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 3/181 (1%) Query: 12 VQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFS 70 ++ ++ A G R+ ++ L Y G R+SE+ + ++L G I + K Sbjct: 116 IEDLLSAADVKTKLGIRNKAILELLYATGARVSEVATISLNGINLEYGYIKCKG-KGSKE 174 Query: 71 TVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGT 129 + PL A++ + R K + + +F+SR G L R+ + I+++ ++AG Sbjct: 175 RIVPLGKKASIAIQEYLTTVRPQIKDSQNSHYLFLSRTGRPLRRENIWLIVKNCALKAGI 234 Query: 130 VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLI 189 PH LRH+ L E GAD R +Q+ LGH +I T YT N + ++ + Sbjct: 235 TEAISPHKLRHSFATHLLENGADLRAVQEMLGHVSISTTQIYTHVNKQHLKAIHQKFHPR 294 Query: 190 N 190 Sbjct: 295 A 295 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 3/185 (1%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ +V+A++ A G A G RD ++ L Y G+R+SEL+ L ++ LN+G + + Sbjct: 157 LSEAQVEALLAAPEVGTALGLRDRTMLELMYASGLRVSELVMLKTVEVGLNDGVVRVMG- 215 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P +ER+ +E R GA +DA+F++ RG ++RQQ + II+ Sbjct: 216 KGSKERLVPFGEVAHGWIERYLREARPALLGARTSDALFVTARGEGMTRQQFWNIIKRHA 275 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + A PH LRHA L GAD R++Q LGH +I T YT R L Sbjct: 276 MRAEIRAHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARERLRTLHA 335 Query: 185 RNNLI 189 ++ Sbjct: 336 AHHPR 340 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 4/187 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L +EV +M A G RD + L Y G+R+SE+ L +D + I Sbjct: 118 LPDILDIEEVDLLMNQPDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTIYSID--DQYIR 175 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ AV+++ +++ ++F++ RG + R +R I+ Sbjct: 176 VYG-KGSKERIVPIGSQALMAVDQYLSLYRWQWDSEKEQSLFVTLRGKSMDRISIWRSIK 234 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + +AG PH LRH+ L GAD R+IQD LGH NI T RYT ++A Sbjct: 235 EYAQQAGITKTISPHTLRHSFATHLLNNGADLRVIQDLLGHANISSTDRYTRVSSAHLQE 294 Query: 182 LWERNNL 188 + R + Sbjct: 295 AFHRFHP 301 >UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria RepID=Q2C2Q0_9GAMM Length = 302 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 2/194 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L E+ ++ RD ++ L Y G+R++EL+ + + + L++G + Sbjct: 111 PLPKNLDVDEMNQLLDVNDDDPLAIRDRAMMELMYGAGLRLAELVGIDVRHISLSKGDLR 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K V P RE V +W + R N A A+F+S+ G+R+S + + + Sbjct: 171 VIG-KGDKERVVPFSGLAREWVAKWLKLRDNIALA-EEPALFVSKLGTRISTRNVQKRMA 228 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G + + +PH LRH+ + E D R +Q+ LGH N+ T YT + A Sbjct: 229 EWGQKQAVSSHINPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQHLAK 288 Query: 182 LWERNNLINEKLKR 195 +++ + +K + Sbjct: 289 VYDEAHPRAKKRNK 302 >UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteria RepID=XERC_ALCBS Length = 307 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 3/197 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L +V ++ A RD ++ L Y G+R++ELL L+ +DL+E ++ Sbjct: 111 LPKALDVDQVSHLLDAGTSNSEPLALRDQAIMELLYACGLRLAELLSLNLDSIDLHESQL 170 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ AV RW Q R + +A+FIS+ G RLS + + Sbjct: 171 LVTG-KGNKTRQLPVGKPALTAVRRWLQVRPMLIKSSDQNALFISKNGRRLSPSSVQQRL 229 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + +E G HPH LRH+ L E D R +Q+ LGH ++ T YT + A Sbjct: 230 KRHALERGLDAHLHPHKLRHSFATHLLESSGDLRAVQELLGHADLATTQVYTHLDFQHLA 289 Query: 181 GLWERNNLINEKLKREE 197 +++ + ++ K ++ Sbjct: 290 QVYDGAHPRAQRRKDDD 306 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 6/192 (3%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + + L A++ A RD + L Y G+R+SEL L DLDL EG Sbjct: 124 TLPKALPVDATSALLDAPIDPEDDLALRDQAMFELLYSCGLRLSELTGLDLADLDLGEGL 183 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + + P+ R+A+ERW R + G A+F + G RLS +Q + Sbjct: 184 LTAHG-KGNKTRILPIGRQARQALERWLAIRPSQPG---EGAVFTGKSGRRLSGRQVEKR 239 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + G+ HPHMLRH+ L + D R +Q+ LGH N+ T YT+ + Sbjct: 240 LEQWAQRHGSDRHVHPHMLRHSFASHLLQSSGDLRAVQELLGHANLSTTQIYTSLDFQHL 299 Query: 180 AGLWERNNLINE 191 A +++ + + Sbjct: 300 AKVYDATHPRAK 311 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 4/189 (2%) Query: 5 RYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + + A++ A G RD + L Y G+R+SEL+ L+ D+D RI +R Sbjct: 120 KVFNIDSIIALLDAPDKDKPAGMRDALIQELMYGTGVRVSELVGLNLSDIDFGGMRILVR 179 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGA--DRTDAIFISRRGSRLSRQQAYRIIR 121 K + P+ E + + + + +AIFI++ GSRL+ + RI+ Sbjct: 180 G-KGKKERIVPIADMHIEMINDYLDVKMDICNGYLPDNEAIFINKFGSRLTDRSVRRIVE 238 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 AG PH RH+ L E GAD R IQ LGH ++ T +YT N Sbjct: 239 KYLKIAGLPMDFSPHSFRHSYATHLLEGGADLRTIQSLLGHESLTTTQKYTHLNLTELLR 298 Query: 182 LWERNNLIN 190 +++ + Sbjct: 299 VYDATHPFA 307 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 2/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ E+ +++A G G RD ++ + Y G+R+SE++ L D+D +G + Sbjct: 136 LPKVLSFDEIALLIEAPEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKLADIDRRKGIVM 195 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K G + PL A++ + + RA + T +F+S RG L+RQ ++++ Sbjct: 196 ALG-KGGKRRLVPLGEPALAAIDAYLELRATHPRSAATQVLFLSPRGGPLTRQAVWKLLG 254 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G + PH LRH+ L E GAD R +Q LGH N+ T YT Sbjct: 255 GYARAVGIAKPSSPHKLRHSFATHLLEGGADLRSVQALLGHANVVTTEIYTHLADDHVRA 314 Query: 182 LWERNNLIN 190 + R + Sbjct: 315 AYRRAHPRA 323 >UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus capsulatus RepID=Q60AJ2_METCA Length = 304 Score = 219 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 1/190 (0%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R L V ++ A RD + L Y G+R+SEL+ L D+D G + + Sbjct: 110 LPRLLDVDAVAGLLDAPADDRLETRDRAMWELFYSSGLRLSELVGLDVVDVDFGAGSVFV 169 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R+ K G + P+ EA+ W + R GA + A+F+SR+G R++ + + Sbjct: 170 RKGKGGKARYVPVGAKALEAIGAWLEARRVLTGAGQ-PALFLSRQGRRIAPRTVEMRLER 228 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 + G + HPHMLRH+ + E D R +Q+ LGH + T YT + R A + Sbjct: 229 WRAKLGLSERVHPHMLRHSFASHMLEASGDLRAVQELLGHATLATTQIYTHVDFQRLAAV 288 Query: 183 WERNNLINEK 192 +++++ + Sbjct: 289 YDQSHPRARR 298 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + L+ EV ++ +V + RD L+ Y G RISE L DLD+ + + Sbjct: 109 PKALSEDEVARILASVTGVDSFALRDRALLEFLYATGARISEACGLSLSDLDMESQLVRL 168 Query: 63 RRLKNGFSTVHPLRFDEREAVERWT-------QERANWKGADRTDAIFISRRGSRLSRQQ 115 K + P + A+E W W D DA+F+ RG+RLSRQ Sbjct: 169 FG-KGSKERIVPFGSHAKAALEEWLGAGGRTMLVSEQWAKRDHADAVFLGSRGTRLSRQA 227 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A+RI++ A + PH+LRH+C + GAD R++Q+ LGH ++ T YT + Sbjct: 228 AWRIVQKFAQIAEVGDEVSPHVLRHSCATHMLIHGADLRIVQELLGHASVSTTQVYTRVD 287 Query: 176 AARFAGLWERNNLIN 190 +++ ++ Sbjct: 288 NEVLFDMYKESHPRA 302 >UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacterium hafniense RepID=B8FPN6_DESHD Length = 322 Score = 219 bits (558), Expect = 5e-56, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 2/167 (1%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVER 85 R+ +I + Y G+R+SEL+ L D+ + R K + P+ E ++ Sbjct: 157 MRNMAMIEVLYGCGLRVSELVGLKVSDIIFETRTLRCRG-KGNKERIVPIGEYALEVLQN 215 Query: 86 WTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 + + R +G +T+ +F++ RG+ L+RQ + I++ G +PH RH+ Sbjct: 216 YLEHDRERLRGKHKTEVLFLNSRGTALTRQGIWDILKKWAQTHGVQENIYPHKFRHSFAT 275 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINE 191 L + GAD R +Q+ LGH +I T YT + R ++ + + + Sbjct: 276 HLLDHGADLRSVQEMLGHADIATTQIYTHLSRQRLLEVFRKAHPRAD 322 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 219 bits (558), Expect = 5e-56, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 3/191 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + + L+ +V+A++ A G RD ++ L Y G+R++EL+ L ++ +NEG Sbjct: 119 LRIPKTLSEAQVEALLAAPDVTTPLGLRDRTMLELMYASGLRVTELVLLKSIEVGMNEGV 178 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYR 118 + I K G + + P + R +ER+ +E R DA+F++ RG+ ++RQ + Sbjct: 179 LRITG-KGGKTRLVPFGEEARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWT 237 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +I+ A PH LRHA L GAD R++Q LGH +I T YT R Sbjct: 238 LIKKHAAAAEINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARER 297 Query: 179 FAGLWERNNLI 189 L + ++ Sbjct: 298 LKHLHQIHHPR 308 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 219 bits (558), Expect = 5e-56, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 5/191 (2%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++LT +E ++ A G ARD L L Y G+R SE+ L +D+DLN G + Sbjct: 109 LPKFLTQEETDRLIDTAANQGKLPARDKALFELIYSSGLRRSEVTGLSIKDIDLNLGVVR 168 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ EA++ + R + + D +F++R G RL+ +++ Sbjct: 169 VMG-KGSKERLVPITDLAIEALKEYLSTRGVY---NSGDPLFLNRLGGRLTGDGLAYLVK 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + I+A + H LRH+ + G D R +Q+ LGH+++ T YT + R Sbjct: 225 NITIKANLARKVTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHVSLDRLKK 284 Query: 182 LWERNNLINEK 192 ++ + + +++ Sbjct: 285 IYGQTHPRSKE 295 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 R+L+ +V A+++ G R+ ++ + Y G+R+SEL+ L + +DL + Sbjct: 107 LPRFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDLVACFVR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P R+ W + R + + +F++R G+ ++RQ ++++ Sbjct: 167 LFG-KGSRERIVPFGSHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPMTRQGFWKLL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + AG + PH LRH+ L E GAD R +Q LGH +I T YT + Sbjct: 226 KKYALGAGISIKVSPHTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYTHVSRQYLV 285 Query: 181 GLWERNNLI 189 + ++ + Sbjct: 286 DMHKKYHPR 294 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 7/192 (3%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L+ +E+ +++ C GARD ++ L Y G+R+SEL DL+ QD+D + Sbjct: 112 KLPHFLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDIDAGSSLL 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K + PL EA ++ + R D+ +A+ ++ +G+RLS + RI+ Sbjct: 172 RVRG-KGNKERIVPLTNYALEAARQYLEMRE-----DKQEALLLNYQGTRLSVRSIRRIL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +EAG HPHMLRH+ L + GAD R +Q+ LGH + T YT R Sbjct: 226 DGLALEAGLSQHLHPHMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLTKERLR 285 Query: 181 GLWERNNLINEK 192 ++E+N+ +K Sbjct: 286 EVYEQNHPRAKK 297 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 218 bits (557), Expect = 7e-56, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 5/188 (2%) Query: 4 RRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ +E+ ++ GARD ++ Y G+R+SEL L D+D + + + Sbjct: 108 PDVLSLEEIDRILAIPNIQTWRGARDKAILETLYACGLRVSELCQLKIYDVD--DTFVRV 165 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K G + P+ A++ + R + R + +FI+++ L+R +++++ Sbjct: 166 LG-KGGKERIVPIGQQAIAAIDGYLSFREGGEN-SRNEFLFITKKSKPLTRALVWKLVKF 223 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +A PH RH L + GAD R+IQD LGH +I T RYT + R Sbjct: 224 YARQASIFKSISPHTFRHTFATHLLDHGADLRVIQDMLGHASINSTDRYTHVSQIRLQQA 283 Query: 183 WERNNLIN 190 ++ + N Sbjct: 284 FQAFHPRN 291 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 4/192 (2%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR-- 59 L+ E+ ++++ A R+ L+ L Y G RISE+L L D+ E Sbjct: 169 LPDTLSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDITALEETDG 228 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSR-LSRQQAYR 118 I + K + P+ R+AV+ + ++ A+F++ RG + +SRQ A++ Sbjct: 229 ILVLTGKGDKQRIVPVGSHARQAVDAYLVRGRPQLNKGKSAALFLNVRGGKAMSRQSAWQ 288 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ A EAG PH LRH+ L E GAD R +Q+ LGH ++ T YT A Sbjct: 289 VVKQAATEAGITKDISPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIYTHITADS 348 Query: 179 FAGLWERNNLIN 190 +W + Sbjct: 349 LRAMWRTAHPRA 360 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 5/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L +E+ + +A RD ++ L Y GMR+ E L D+DL G Sbjct: 130 KLPSFLYEEEMDELFKAFEGNTPLDKRDRAILELLYATGMRVGECSQLDVADIDLRIGTA 189 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA---NWKGADRTDAIFISRRGSRLSRQQAY 117 ++ K P+ +A+ + ++ KG T +F++ RG L+ + Sbjct: 190 FVKG-KGNKERYVPIGSFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGGPLTDRSIR 248 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 R++ EA PH LRH+ L GAD R++Q+ LGH ++ T YT Sbjct: 249 RMLAKRVEEASMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHEHLSTTQVYTHVTKD 308 Query: 178 RFAGLWERNNLIN 190 R +++ ++ Sbjct: 309 RLREVYKNHHPRA 321 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 218 bits (556), Expect = 9e-56, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 4/194 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + + LT ++V+ ++ + RD + L Y G+R+SE + ++ + + Sbjct: 20 TLPKALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVGVNLSSFESELSFVK 79 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ +EA+E+W ER + A T+A+FI++ G R+S + I Sbjct: 80 VLG-KGKKERMLPVGKFAKEAIEKWLVEREHI--AKDTNALFINKYGKRISIRAMQERIY 136 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + I G + PHMLRH+ + E D R IQ+ LGH ++ T YT N + A Sbjct: 137 NISIAQGL-SPVSPHMLRHSFATHILESSGDLRSIQEMLGHSSLSTTQIYTKLNFQQLAK 195 Query: 182 LWERNNLINEKLKR 195 +++R++ +K + Sbjct: 196 IYDRSHPHGKKENK 209 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 217 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EV ++ A RD ++ LAY G+R+SE + + +D+ L + + Sbjct: 123 TLPEVLSVDEVTRLLAAPGLDERLAFRDRAMLELAYGAGLRVSEWIGMSVKDVMLEDSLV 182 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + P+ AV + +E R + +F++ RG+ LSR A+++ Sbjct: 183 RVLG-KGNKERLVPIGRSAIGAVAVYLRELRPVLERGGGKGILFLNGRGAPLSRMGAWKL 241 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R AG PH LRH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 242 VRKYVGMAGIEKPVSPHTLRHSFATHLLEGGADLRAVQEMLGHADIATTQIYTHVDREYL 301 Query: 180 AGLWERNNLIN 190 + + + Sbjct: 302 RSVHRQFHPRA 312 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 217 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 3/192 (1%) Query: 1 MSKRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + LT +E+ ++ + R+ ++ L Y GMRISELL + DL+L E Sbjct: 123 VQLPDVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRISELLSISLHDLNLTERV 182 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYR 118 I + K P E ++ Q R +++ +F++ RG R+SR ++ Sbjct: 183 ILVHG-KGSKQRYVPYVDTLDELFAKYLKQSRPILLKLKQSELLFLNNRGERMSRMGFWK 241 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I+R A +EA + PH RH+ L E G + R++Q LGH +I T YT + R Sbjct: 242 ILRKAVLEANIKKEVTPHTFRHSFATHLLEGGVNLRIVQALLGHSSIDTTQIYTHIDMKR 301 Query: 179 FAGLWERNNLIN 190 ++ + Sbjct: 302 LVETYKEYHPRA 313 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 217 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 4/196 (2%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT EV ++ G RD + L Y G+R+SE+ L D+ + Sbjct: 100 LPESLTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFEGKYLK 159 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 I K + P+ + ++R+ Q R +T +F++ RG ++SR ++I+ Sbjct: 160 ICG-KGKRERIVPINDRALDILQRYIQTSRVIMVKGKKTSELFLNFRGDKISRVGIWKIV 218 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++A ++ +PH LRH+ L + GAD R +Q LGH +I T YT ++A Sbjct: 219 KEAMKKSKIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYTHVDSAHLK 278 Query: 181 GLWERNNLINEKLKRE 196 + + + K R+ Sbjct: 279 KQIAK-HPKHSKHARQ 293 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 217 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 8/196 (4%) Query: 6 YLTGKEVQAMMQAVCYG----ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L + +++A + T ARD ++ L Y G+R+SEL L DLD G + Sbjct: 122 HLNIDQTVTLIEAPGHTGQEQPTFARDTAILELLYSSGLRVSELTGLAVADLDRAAGMVR 181 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 ++ K G + P+ EA+E++ R +F+ RG+R++R+ ++++ Sbjct: 182 VQG-KGGKERIVPVGSAALEALEQYLAGRGQLA---DDAPLFLGCRGARINRRTVAQLVK 237 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 PH LRH + E GAD R IQ+ LGH ++ T +YT R Sbjct: 238 RWASGIPAFRSISPHTLRHTFATHMLEGGADLRSIQELLGHSSLSTTQKYTHVGLDRLLE 297 Query: 182 LWERNNLINEKLKREE 197 ++++ + + ++ Sbjct: 298 VYDKAHPRARETDQQN 313 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 217 bits (554), Expect = 1e-55, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 3/192 (1%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EVQ ++ G RD L+ L Y G+R SE +D+ +LD+++G + Sbjct: 124 KLPKVLSRDEVQHLLSQPRGTGPAALRDRALLELMYACGLRASEAVDMQLDELDVDDGIL 183 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ +A+ + + R G +F+++RG L+RQ Y+I Sbjct: 184 RANG-KGNKERLVPIGSKALDALRHYLTRGRPQMVGLREEKRVFVNQRGHGLTRQGLYKI 242 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ AG + PH LRH L G D R +Q+ LGH +I T YT +A R Sbjct: 243 VQRHARTAGLGDKMSPHTLRHTFATHLLAGGCDLRSLQEMLGHADIATTQIYTHLSAERL 302 Query: 180 AGLWERNNLINE 191 ++ + + Sbjct: 303 RDVYFDAHPRAQ 314 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 217 bits (554), Expect = 1e-55, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 5/197 (2%) Query: 2 SKRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT EV +++ TG R+ L+ L Y G+RI E+ L DLDL +G + Sbjct: 103 TLPEVLTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDLTQGYV 162 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + PL ++++ + + R +K +++ +F++++G+ L+ + + Sbjct: 163 RVTG-KGRRQRIVPLGKYALDSLKLYLEAGRPAFK--PKSEKLFLNQQGAGLTVRGIRYL 219 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I +AG + PH RH+ L E GAD R +Q+ LGH+ + T YT + R Sbjct: 220 ISQIVKKAGLNRKITPHTFRHSYATHLLEGGADIRAVQELLGHKRLSTTEIYTHLSKERL 279 Query: 180 AGLWERNNLINEKLKRE 196 ++ R + + + K + Sbjct: 280 REVYLRTHPRSREEKND 296 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 2/192 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +E+ ++ + A +R+ C++ L Y GMRISELL+L +DL++ G I Sbjct: 108 KLPIILSQEEMIEILDGIIVCDAISSRNRCMVELLYATGMRISELLNLTLKDLNIKMGFI 167 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ E +E++ + +F ++ G RLSR++ Y I+ Sbjct: 168 KVIG-KGNKERMIPIGSYVGEILEQYINDYRAEFNIKNDSLLFFNKHGQRLSREEFYSIL 226 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + PH RH L E GAD R IQ+ LGH +I T YT + + Sbjct: 227 QTIVNSTSITKKVSPHTFRHTFATHLLENGADLRSIQELLGHSDISTTTIYTHISNQKIR 286 Query: 181 GLWERNNLINEK 192 +++ + +K Sbjct: 287 SEYQQFHPRIKK 298 >UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia RepID=XERC_NATTJ Length = 299 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L+ +EV+ ++ A G RD ++ + Y G+R+ EL L Q+LDL G + Sbjct: 107 KLPEFLSIEEVEMLINAPGDDPFGLRDKAILEVFYCSGIRLGELWGLDLQNLDLQTGYLK 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRT----DAIFISRRGSRLSRQQA 116 + K + PL A+E + R +++ DA+F+++ G+R+S++ Sbjct: 167 VTG-KGNIERLAPLGSFALAAIEDYLYNARPELLKKNKSVENCDALFLNKFGTRISQRSI 225 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 R ++ + + + PH LRH+ L E GAD R +Q+ LGH NI T YT N Sbjct: 226 RRRVKKYVQQTASEHRVSPHSLRHSFATHLLEGGADLRAVQELLGHVNISTTQIYTHVNQ 285 Query: 177 ARFAGLWERNNLIN 190 AR ++ + + Sbjct: 286 ARMTEVYNKYHPRA 299 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 216 bits (552), Expect = 2e-55, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 5/200 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M + E++ + ++ + R+ L+ + Y GMR+SEL +L + LDL+ Sbjct: 106 MLLPEFFYEDEIEKFINSIDGNQSLDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSI 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTD--AIFISRRGSRLSRQQA 116 I + K P+ R A+E + +E R + +R + +F++ G L+ Sbjct: 166 ILVIG-KGSKERYVPIGDFARTALETYLEEGRKDLMAKERKEHFFVFVNHLGDPLTTNGV 224 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 I+ E+G + HPHMLRH L GAD R +Q+ LGH ++ T YT Sbjct: 225 RYILEKLIQESGLTLKIHPHMLRHTFATHLLNNGADMRTVQELLGHVSLSSTQIYTHVTK 284 Query: 177 ARFAGLWERNNLINEKLKRE 196 ++ ++ K E Sbjct: 285 EALQQNYQLYFPRSKAGKNE 304 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 5/189 (2%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 +LT E+Q ++ RD +I L Y G+RI EL+ L +++D + + Sbjct: 130 PSFLTENEMQMLLNLPDLKP---RDRAMIELFYSCGLRIEELVSLDLKNIDFISNVVTVT 186 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANW-KGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P+ A++ + +R N D +F+S R RL ++ A RI+ Sbjct: 187 G-KRNKERIVPVGDICLHAIKDYINKRRNLGLPYDIRSPVFLSDRAKRLGQRTARRILHR 245 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 ++AG + PH LRH + +RG D R +Q+ LGH+N+ T YT + Sbjct: 246 YFVKAGFTKKVSPHTLRHTFATHILDRGCDLRSVQEMLGHKNLSSTQIYTHVTIESLKKV 305 Query: 183 WERNNLINE 191 ++ + + Sbjct: 306 YKETHPRAK 314 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 2/196 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L + + RD L+ L Y G+R++E+ L+ D+D + + Sbjct: 113 KLPKTLDVDQTAQFVAVEGDDFIHKRDRALLELIYSSGLRLAEVTSLNLGDIDWGDAMVT 172 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ A++ W +R + A A+FI++RG R+S + ++ Sbjct: 173 VTG-KGSKTRTLPVGSVAIAALKDWLSQREQYAPAS-EPALFITQRGKRISHRAVQLRLQ 230 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 ++ G HPHMLRH+ + E D RL+Q+ LGH NI T YT + A Sbjct: 231 QLSVQQGMDNPVHPHMLRHSFASHMLESSGDLRLVQELLGHANISTTQIYTHLDFQHLAK 290 Query: 182 LWERNNLINEKLKREE 197 ++++ + + K + Sbjct: 291 VYDKAHPRAGRKKSSD 306 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 6/192 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYG---ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 +L+ EV A ++A R+ ++ + Y G+R+SEL L +D + Sbjct: 108 LPDFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAVDFDNEL 167 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA--DRTDAIFISRRGSRLSRQQAY 117 + + K + + P+ + R+ + R+ +F+S+ G L+R+ + Sbjct: 168 LRVVG-KGSKTRIVPIGKVALRTLRRYLADVRPLLAEKNPRSPYVFLSKSGRPLNREWIW 226 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 +++ A AG HPH LRH+ L GAD R+IQ+ LGH +I T YT ++ Sbjct: 227 NVVKVAAARAGIHKNIHPHTLRHSFASHLLAHGADLRVIQEMLGHADISTTEIYTHIDSN 286 Query: 178 RFAGLWERNNLI 189 R A + + + Sbjct: 287 RLAAIHHKFHPR 298 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ +V ++ RD ++ L Y G+R+SEL+ L + + L +G + Sbjct: 112 LPDSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVR 171 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 I K G + P+ VE + R G ++D +F S+R ++RQ + I Sbjct: 172 IIG-KGGKERLVPMGEMAITEVEHYLTSARHELLGHIQSDVVFPSKRSQMMTRQTFWHRI 230 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + AG T+ PH LRHA L GAD R++Q LGH ++ T YT AR Sbjct: 231 KLYASRAGIETELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQ 290 Query: 181 GLWERNNLI 189 L ++++ Sbjct: 291 ELHQQHHPR 299 >UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetobacter RepID=B2HX80_ACIBC Length = 308 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 7/197 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-----GARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + + V ++ RD ++ L Y G+R++EL L +D+D N Sbjct: 112 PLPGMIDIETVNQILDQPMPEKPVDQQLWLRDKAMLELLYSSGLRLAELQGLTIKDIDFN 171 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSRLSRQQ 115 + I K + + P +E++ W + WKG D+ ++FIS+RG L+ +Q Sbjct: 172 RQLVRITG-KGNKTRIVPFGKKAKESLLNWLKIYNIWKGHFDQNASVFISQRGGALTPRQ 230 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 + ++ AG HPH+LRH + D R +Q+ LGH N+ T YT + Sbjct: 231 IEKRVKLQAQRAGVNVDLHPHLLRHCFASHMLSSSGDLRSVQEMLGHSNLSTTQIYTHID 290 Query: 176 AARFAGLWERNNLINEK 192 A ++++ + K Sbjct: 291 FDHLAQVYDQAHPRATK 307 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 6/192 (3%) Query: 3 KRRYLTGKEVQAMMQAV----CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 LT +E+ ++ A RD ++ Y G+R+SELL L +L +++G Sbjct: 113 LPSVLTIEEMATLLDAPLKRHPTSTFMLRDKAMLEFLYATGVRVSELLGLSRLNLHMDDG 172 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAY 117 + + K + P+ ++R+ E R A D IF++ RG LSR A+ Sbjct: 173 FVRVFG-KGSKERLVPVGQTAISWMKRYLDELRPGMMSATSHDTIFLNSRGGPLSRMAAW 231 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I+R+ + AG PH RH+ L E GAD R++Q+ LGH +I T YT + + Sbjct: 232 NIVREHAVIAGIEKPISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQIYTHIDRS 291 Query: 178 RFAGLWERNNLI 189 + + + Sbjct: 292 FIKEVHKTFHPR 303 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 5/189 (2%) Query: 6 YLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 L+ EV+A + AV + RD L+ + Y G R SE+ L +DL L+E + Sbjct: 138 VLSPNEVEAFLSAVKKSDSFWQRDRALLEVLYATGCRASEVCTLRVRDLTLDEKTLRCHG 197 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRT---DAIFISRRGSRLSRQQAYRIIR 121 K + P+ A++ + +E + D +F+SR G L R Q +R+++ Sbjct: 198 -KGDKQRMVPIGGRAIRAIQLYLEESRHILADRNPGQIDELFLSRGGKALDRIQLWRLVK 256 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 AG + PH LRH+ L GAD R +Q+ LGH +I+ T YT +R Sbjct: 257 RYAKRAGISDEISPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIYTHVEHSRLQR 316 Query: 182 LWERNNLIN 190 + + Sbjct: 317 VHRDFHPRA 325 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%) Query: 3 KRRYLTGKEVQAMMQAV-----CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 + LT EV A++++V G R+ L+ L Y G RISE + L D+D Sbjct: 119 LPKSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQA 178 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADR----TDAIFISRRGSRLS 112 + ++ K G + P+ +A++ + + R++ T AIF++ RG RLS Sbjct: 179 RTVLLQG-KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLS 237 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 RQ A+++++DA AG + PHMLRH+ L E GAD R++Q+ +GH ++ T YT Sbjct: 238 RQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYT 297 Query: 173 ASNAARFAGLWERNNLINE 191 +W + + Sbjct: 298 LVTVQALREVWAGAHPRAK 316 >UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae RepID=D1B5G4_THEAS Length = 297 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 9/192 (4%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG-ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 LT EV +++A A G RD +I L Y G+R SEL L +DLDL+ G + Sbjct: 111 PMPAILTEGEVLRLLEATAGDAPGDLRDRAMIELLYGCGLRASELCSLTMKDLDLSSGTV 170 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K V PL + R A+ER+ + R +G IF RG R+ +++I Sbjct: 171 RVRG-KGDKVRVLPLVGETRSALERYLKVRGTHQG-----PIFQGDRGGPFRREMLWKMI 224 Query: 121 RDAGIEAGTV-TQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + G +A ++ HPH+LRH+C L RG D R +Q LGH ++R T YT + Sbjct: 225 QRRGRQACIAASRLHPHILRHSCATHLLRRGMDLRTLQCLLGHSSVRTTEVYTHFDLE-L 283 Query: 180 AGLWERNNLINE 191 +++R++ + Sbjct: 284 RDVYDRSHPRAQ 295 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 215 bits (549), Expect = 5e-55, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L +EV +++ G RD ++ L Y G+R++EL L D+DL + Sbjct: 111 KLPVFLDEREVAELLELPADDVLGRRDAAILELLYATGIRVAELTGLKTSDVDLVSRFVI 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGA---DRTDAIFISRRGSRLSRQQAY 117 + K + P+ A+ER+ + R ++ +FI+ +G L+ + Sbjct: 171 VCG-KGAKERIVPIGRTAAAALERYLADARPRLYSKWRKEQHQFLFINSKGGPLTDRSVR 229 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 RII + PH +RH + GAD R +Q+ LGH N+ T YT Sbjct: 230 RIIDKYIANLAVAKKVSPHTIRHTFATHMLNNGADLRSVQEMLGHVNLSTTQLYTHVTKE 289 Query: 178 RFAGLWERNNLIN 190 R ++ + Sbjct: 290 RLKAVYRETHPRA 302 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 215 bits (549), Expect = 5e-55, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 2/185 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L E++ ++ + G R+ +I L Y G+R+SE++DL DLDL E + + Sbjct: 106 LPHFLMYDEIETLLLSCDESVLGVRNQVMIELMYACGLRVSEVVDLQIHDLDLTERSLRV 165 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + + R + T+A+F+++RG L+ + I+ Sbjct: 166 IG-KGNKERQLFFYESLVPKLWSYLNLYRPQFPNVSDTEAVFLNQRGKPLTPRGIQHILE 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G AG + HPHMLRH+ L + GA R++Q LGH ++ T YT + + Sbjct: 225 HQGKTAGLRMKLHPHMLRHSFATHLLDNGASLRVVQTLLGHESLSTTQIYTHVSMQKIKE 284 Query: 182 LWERN 186 +++ Sbjct: 285 VYDDA 289 >UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteobacteria RepID=A0L875_MAGSM Length = 296 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 3/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ E +A++ A G RD ++ L Y G+R+SEL+ L LD G + Sbjct: 107 KLPNTLSEAETEALLYAPDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLDEENGFV 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + P+ E V R+ R R + +F+S RG+ ++R + I Sbjct: 167 RVIG-KGNKERIVPMGEAATEMVIRYRHSARQVLLKGGRCNDLFLSNRGAAMTRHNFWHI 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ EA + PH +RHA L GAD R +Q LGH +I T YT AR Sbjct: 226 VKRYAYEANIMKPLSPHGIRHAFATHLLNHGADLRAVQMMLGHADISTTEIYTHVANARL 285 Query: 180 AGLWERNNLI 189 L ++ + Sbjct: 286 KKLHDQLHPR 295 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 12/200 (6%) Query: 6 YLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +L +E+ ++ + G RD L+ L Y G+R+ EL+ L+ D+D +EG + + Sbjct: 153 FLDEEEIGGLLSQPDTHTPLGLRDRALLELLYATGLRVGELVALNRGDIDYSEGWVIVWG 212 Query: 65 LKNGFSTVHPLRFDEREAVERWTQE-----RANWKGADRT-----DAIFISRRGSRLSRQ 114 K P+ + +A+ + ++ RA A+++ +F+++ G RLS + Sbjct: 213 -KGRKERAVPVGSEALQALGHYLRDGWPVLRARAPAAEQSLPEAKQPLFLNKLGGRLSDR 271 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 R++ + Q PH +RH + GAD R +Q+ LGH ++ T YT Sbjct: 272 SVRRLLDRYVSQLALSRQISPHKIRHTFATHMLNHGADLRAVQEMLGHASLSTTQIYTHV 331 Query: 175 NAARFAGLWERNNLINEKLK 194 R + R + + Sbjct: 332 TTQRLRTEYLRAHPRQRRAA 351 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 5/190 (2%) Query: 3 KRRYLTGKEVQAMMQ--AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EV+ ++ A R++ ++ L Y GMR+SEL+ L ++ G + Sbjct: 168 LPKVLSSAEVEQLLAPPAPPASILALRNHAMLHLLYATGMRVSELVKLPVAAVN-QAGHL 226 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 I K + P R+A+ + Q R R+D +F++ RG+ ++R + ++I Sbjct: 227 RILG-KGSKERLVPFGEAARQAMAVYITQARPRLLKKRRSDFLFVTGRGTAMTRLRFWQI 285 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R + E G + PH+LRH+ L E GAD R +Q LGH +I T YT + R Sbjct: 286 VRKSARERGIAREISPHVLRHSFATHLLEHGADLRAVQVMLGHADIATTQIYTHVDTNRL 345 Query: 180 AGLWERNNLI 189 + + + Sbjct: 346 KAIHRKFHPR 355 >UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 Length = 301 Score = 215 bits (548), Expect = 8e-55, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 5/198 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 ++L+ EV ++ + G RD +I Y G+R+SEL+ ++ +D++ N G I Sbjct: 107 KLPQFLSVDEVMKLLNSPSLDDLIGIRDRAIIETLYATGIRVSELVGMNEEDINWNYGEI 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + + + ++ + A F++ +G R+S + II Sbjct: 167 RVFG-KRAKERIVIVGEETLKILQLYKDHVRPKLLKKPEKAFFLNAKGGRISDRAIRMII 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + + PH LRH L E GAD R +Q+ LGH I T YT + + Sbjct: 226 KKYTKD--FNKKVSPHTLRHTFATHLLEGGADLRYVQELLGHVRISTTQIYTHLTSEQIR 283 Query: 181 GLWERNNLIN-EKLKREE 197 + ++ +K +EE Sbjct: 284 KTYTLSHPRAIKKETKEE 301 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%) Query: 4 RRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L +E+ ++ ++ G R+ ++ L Y G+R SE+++L ++D N+ + I Sbjct: 114 PDFLFPEEILGLLDSIETKDDLGIRNKAMMELMYASGLRCSEVVNLQLSNIDFNQMVLFI 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADR-TDAIFISRRGSRLSRQQAYRII 120 K P E + ++ QE R N + + +F+++ G+ L+ + I+ Sbjct: 174 HG-KGNKDRYVPFHDYAGEWLIKYIQEARENLMIKNEGHNFVFVNKFGNPLTNRGVENIV 232 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + HPH +RH+ L GAD R +Q+ LGH N+ T YT + Sbjct: 233 DRIMRLYDSTKKIHPHTIRHSFATHLLNAGADIRTVQELLGHENLSTTQIYTHISRDHLK 292 Query: 181 GLWERNNLIN 190 ++ + + N Sbjct: 293 EVYLKAHPRN 302 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 4/188 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT +E+ ++ AV G RD ++ + Y G+R+SEL L DL EG I Sbjct: 114 LPDILTVEEIDRIVAAVDTSTVKGRRDSAMLEVLYSCGLRVSELTSLRLGDLFFGEGYIR 173 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ RE ++R+ +RA +D +F++ RG++L+R + I+R Sbjct: 174 VTG-KGDKQRLVPVSGAAREKIQRYLDDRAT--KTSASDVVFLNNRGTQLTRVMVFTILR 230 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +A AG PH RH+ L E GA R +Q+ LGH +I T YT Sbjct: 231 EAVHRAGIDKHISPHTFRHSFATHLLEGGASIRQVQEMLGHESILTTEIYTHLEGDHLRD 290 Query: 182 LWERNNLI 189 E+ + Sbjct: 291 TVEKYLPL 298 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 4/189 (2%) Query: 4 RRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 LT +EV+ ++ G RD ++ + Y GM+++ELL+L D++L I Sbjct: 106 PDILTIEEVEKLLMGPDGNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINLKLSYIKC 165 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R +KN + P+ + +E + + R D +F + +G +++RQ ++II+ Sbjct: 166 RGIKN-KERIIPMGSYAVKCLEIYLKVRTKL-NVQNIDYLFFNLQGDKMTRQGFWKIIKQ 223 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS-NAARFAG 181 E+G + + + LRH+ L + GAD + IQ+ LGH ++ T Y+ R A Sbjct: 224 YAQESGIKKKINAYTLRHSFAVHLLQNGADIKTIQELLGHSDMATTQIYSGMYRKTRIAE 283 Query: 182 LWERNNLIN 190 ++++ + Sbjct: 284 VYKKTHPRA 292 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 7/189 (3%) Query: 10 KEVQAMMQAVCYGAT-----GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 + V ++ RD ++ L Y G+R++EL L +D+D N + I Sbjct: 123 ETVHQILDQAPPDKPIEQQLWLRDKAILELLYSSGLRLAELQGLMIKDIDFNRQLLRITG 182 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + + P ++++ W + W+G + A+FIS+RG+RL+ +Q ++ Sbjct: 183 -KGNKTRIVPFGQKAKDSLIEWLKIYRIWQGEFNLDSAVFISQRGNRLTPRQIENRVKLQ 241 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 AG HPH+LRH + D R +Q+ LGH N+ T YT + + A ++ Sbjct: 242 AQRAGVNVDLHPHLLRHCFASHMLSASGDLRSVQEMLGHSNLSTTQIYTHVDFDQLARVY 301 Query: 184 ERNNLINEK 192 ++ + +K Sbjct: 302 DQTHPRAQK 310 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 4/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ E++ ++ A+ G R+ ++ Y G+R+SEL DL +L ++G + Sbjct: 109 KLPDTLSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCGLRVSELTDLKISNLFFDDGFV 168 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG--ADRTDAIFISRRGSRLSRQQAYR 118 + K + P+ D R+ + + E + +F++RRG++LSR + Sbjct: 169 KVLG-KGNKERLVPIGRDARKYIGMYRNEVRCHLDIVKGAENYVFLNRRGNKLSRVMVFT 227 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 II++ ++ G PH RH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 228 IIKNLAVKIGLKKTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDY 287 Query: 179 FAGLWERNNLIN 190 + + + + Sbjct: 288 LQQIIKDFHPRS 299 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 4/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +EV ++ A G RD L+ Y G R+SE DL L L++G + Sbjct: 112 KLPELLSREEVVRLIAAPGVDTPLGLRDTALLEFMYATGCRVSEACDLELSSLHLDQGLV 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANW-KGADRTDAIFISRRGSRLSRQQAYR 118 + K + PL A+ W +E R A R +F+++RGSRLSRQ + Sbjct: 172 VLTG-KGSKQRMVPLGDCALVALLAWLEEGRPELVARAPREAHVFVNKRGSRLSRQGCFF 230 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +R + AG PH LRH+ L E GAD R +Q LGH +I T YT + + Sbjct: 231 RLRQHAVSAGITRDISPHKLRHSFATHLIEGGADLRAVQTLLGHADISTTQVYTHLSQSH 290 Query: 179 FAGLWERNNLIN 190 ++ ++ Sbjct: 291 VRHAYDLHHPRA 302 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 7/189 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S ++LT E+ ++ ++ R+ + L Y GMR+SEL +L+ D+D + Sbjct: 114 SIPQFLTVDELFTLLDSIKTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDIDRESHLV 173 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K + P+ +AV+ + A+F++R R S R++ Sbjct: 174 RVRG-KGNRERLVPVGDRALKAVDDY-----RTCIDGEFGALFLNRDAHRFSDSSIRRVL 227 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 G PH LRH+ + + GAD R IQ+ LGH ++ T YT AR Sbjct: 228 SVLVKACGLGVPVSPHTLRHSFATHMLDAGADLRGIQEILGHASLSSTQIYTHVTYARLM 287 Query: 181 GLWERNNLI 189 +++R + Sbjct: 288 EVYDRAHPR 296 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 2/189 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT +E+ ++ R ++ L Y G+R+SEL+ L + ++L + + Sbjct: 103 KIPETLTKEEISRLLSFPPKTFAEIRTLTILELFYACGLRVSELVSLRIESVNLKDKWV- 161 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANW-KGADRTDAIFISRRGSRLSRQQAYRII 120 + K P+ + +E + ER + KG + IFI++ G ++SR ++ + Sbjct: 162 LAYGKGAKQRFIPIHDRAVKVLEIYLSEREKYLKGKESASEIFINKNGKKISRMSVWKDV 221 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 D G AG HPH+ RH L GAD R +Q+ LGH +++ T YT + Sbjct: 222 NDLGRLAGIERSLHPHLFRHTFATHLLIGGADLRSLQEMLGHADLQTTQIYTHLDVQSLK 281 Query: 181 GLWERNNLI 189 ++ + Sbjct: 282 EKHKKFHPR 290 >UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWI0_9PROT Length = 299 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 5/189 (2%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + ++ +V+ ++ A G RD C++ L Y G+R+SEL+ L ++++ G + Sbjct: 112 PLPKMMSEHDVERLLAAPETEDPVGLRDRCMLELLYATGVRVSELVSLTRGQVEMDAGLL 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P + + +++W R + +F R G ++RQ + I Sbjct: 172 RVIG-KGDKERLIPFGEEAGQWLQQWLLLRP---AKPASPYLFAGRGGHAMTRQNFWLRI 227 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + AG + PH LRHA L GAD R +Q LGH ++ T YT + AR Sbjct: 228 KRYATMAGIMPLPSPHTLRHAFATHLLNHGADLRAVQMLLGHAHVTTTEIYTHVSRARMH 287 Query: 181 GLWERNNLI 189 L ++ + Sbjct: 288 DLVNHSHPL 296 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 2/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L+ +EV+ ++ + + ++ L Y G+RISEL L + L G + Sbjct: 107 LPSFLSVEEVKQLLNSFTRDDPKQELNRTILELIYACGLRISELCSLTVAQVQLETGILR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + P+ + ++ + +T+ FI+ G+R++ + +++ Sbjct: 167 ILG-KGNKERIVPIPNQVVKDLDYYLNLIRPIWNQHKTNTFFINHLGNRITARSIQLLLK 225 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +E G PH LRH L + GAD R+IQ+ LGH NI+ T YT + Sbjct: 226 QKAMECGFQKDITPHSLRHTYATHLLQAGADLRIIQELLGHSNIKTTEIYTHVQNRQLFE 285 Query: 182 LWERNNLINEK 192 ++ + +++K Sbjct: 286 AYQNFHPLSKK 296 >UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteria RepID=XERD_HAEIN Length = 297 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +YLT ++V ++ RD ++ L Y G+R++EL+ L +++ + +G + Sbjct: 108 LPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTELVSLTIENMSVQQGVVR 167 Query: 62 IRRLKNGFSTVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ + V ++ R +D +F S+R +++RQ + + Sbjct: 168 VIG-KGNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVVFPSQRAQQMTRQTFWHRV 226 Query: 121 RDAGIEAGTVTQ-THPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + I A PH+LRHA L GAD R++Q LGH ++ T YT R Sbjct: 227 KHYAILADIDADALSPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKERL 286 Query: 180 AGLWERNNLI 189 L ER + Sbjct: 287 KRLHERFHPR 296 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 3/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+G+EV+A++ + GA RD ++ L Y G+R+SEL+ L +++L+ G + Sbjct: 103 KLPAVLSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKLSEVNLSAGYL 162 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ A + Q+ R + +F+SR G +SRQ + I Sbjct: 163 MTIG-KGDKERLVPMGESACHATGVYLQQARGELLKEKASTLLFLSRLGGGMSRQAFWNI 221 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ ++AG T PH LRH+ L E GAD R +Q LGH ++ T YT R Sbjct: 222 IKKRALQAGVRTSISPHTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYTHVTRERM 281 Query: 180 AGLWERNNLI 189 L + Sbjct: 282 KKLHADFHPR 291 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +E++ ++ + G G R+ ++ Y G+R+SE+ +L L + G I Sbjct: 126 QLPDVLSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQISQLHFDAGFI 185 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRGSRLSRQQAYR 118 + K + P+ D + + + E + D +F++RRGS L+R + Sbjct: 186 RVVG-KGDKERLVPIGSDAVKYINIYKDEVRVHVPVKKGQEDILFLNRRGSALTRVMIFL 244 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +I++ AG Q PH RH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 245 VIKELTAAAGIDKQVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTHLDREY 304 Query: 179 FAGLWERNNLI 189 +R + Sbjct: 305 LRDTLQRFHPR 315 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 4/192 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ ++V+ +++A+ G R+ C+I + Y G+R+SEL+DL +++ E + Sbjct: 111 LPDTLSFEDVERIIKAINISTDLGRRNQCMIEVLYGCGLRVSELIDLKISNINFKELYLK 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADR-TDAIFISRRGSRLSRQQAYRI 119 + K S PL + ++ + QE R+ +K + D +F++ RGS +SR + I Sbjct: 171 V-DGKGDKSRFVPLATYTAKLIKEYIQEIRSKYKINKKCEDVLFLNSRGSAMSRVIVFII 229 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I++ +AG + PH RH+ L + GAD R IQ+ LGH +I T YT Sbjct: 230 IKELTEKAGINKKISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYTHLKNEEL 289 Query: 180 AGLWERNNLINE 191 + + N+ Sbjct: 290 RDVILNFHPRNK 301 >UniRef50_Q846B3 FotS n=1 Tax=Escherichia coli RepID=Q846B3_ECOLX Length = 199 Score = 212 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 96/185 (51%), Positives = 126/185 (68%), Gaps = 1/185 (0%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 KR+YL+ KEV +++A RDYC+I +A+ HG+R+SEL++L D D ++NI Sbjct: 2 KRKYLSEKEVHCLLKAAAENQYSVRDYCMISMAFIHGLRVSELVNLKVDDYDSLSAQLNI 61 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 +RLKNGF T+ PL DE E ++ W ER W G + +F+S+ G LSRQ+ ++++R Sbjct: 62 KRLKNGFCTIQPLLPDENELLQCWLDERKTWDGHESC-WLFLSKNGGPLSRQRFWQLLRK 120 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 G EA + HPHMLRHACG+ LAERG DTRLIQDYLGHRNIRHTV YTASN RF Sbjct: 121 YGDEAHLTIKVHPHMLRHACGFNLAERGNDTRLIQDYLGHRNIRHTVHYTASNPERFRNA 180 Query: 183 WERNN 187 W +NN Sbjct: 181 WTKNN 185 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 212 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 3/186 (1%) Query: 7 LTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 L+ EV ++ A A G RD ++ L Y G+R+SEL+ L D++L R+ + R Sbjct: 130 LSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLNDVNLET-RVLVARG 188 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P+ +AV+ + R R+ +F++ RG R++RQ +I+ Sbjct: 189 KGDKERIVPVGAPAADAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQGFAKILDRCA 248 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 AG + PH LRH+ L E GAD R +Q+ LGH ++ T YT + L++ Sbjct: 249 RRAGIRRRISPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHVDRTHVKRLYD 308 Query: 185 RNNLIN 190 R + Sbjct: 309 RFHPRA 314 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT +++A++ A G R+ ++ L Y G+R+SEL+ L L+ +G + Sbjct: 127 PLPKALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSELVTLPVAMLNQRQGVL 186 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRT--------DAIFISRRGSRLS 112 I K G + PL + + ++R+ ++ AD+ +FI+ RLS Sbjct: 187 RITG-KGGKERLVPLGEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTNLKRLS 245 Query: 113 RQQAYRIIRDAGIEAGTVT-QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 RQQ +R I+ G + PH+LRH+ L GAD R +Q LGHR+I T Y Sbjct: 246 RQQFWRWIKHYAALVGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSISTTQIY 305 Query: 172 TASNAARFAGLWERNNLI 189 T L +++ Sbjct: 306 TLIARQHLQQLHAQHHPR 323 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 4/186 (2%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +T +++ ++ A G RD L+ L Y G+R+SE + L + +LDL+ G I Sbjct: 125 ITEQQISRLLSAPDTDTPHGLRDKALLELMYATGLRVSEAVRLSFGNLDLDRGCITTLG- 183 Query: 66 KNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P+ + VER+ +E R DA+F+S++ + +SRQ A+ I+++ Sbjct: 184 KGNKQRIVPMGRESVYWVERYYKEARPLLLKGRSCDALFVSQKKTGISRQLAWMIVKEYA 243 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 +AG PH LRHA L + G D R++QD LGH ++ T YT R + + Sbjct: 244 SQAGI-EHISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVANVRLHSVVK 302 Query: 185 RNNLIN 190 ++ N Sbjct: 303 EHHSRN 308 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 3/193 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L E+QA+ A+ + GAR+ +I L Y G+R SE L +D+DL+ + Sbjct: 112 KLPSFLYENEMQAIFDAIDTDSLLGARNLAIIELLYASGIRASECTGLKLKDIDLDLSTL 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQER-ANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K P+ EA+ + +R A + ++D +FI+ RG L+ + +I Sbjct: 172 LVMG-KGKKERFLPVGSFAVEALSLYLDKRTAKFGPHAQSDPLFINYRGGALTDRGLRKI 230 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + +A ++ PH++RH + GAD R +Q+ LGH +++ T YT R Sbjct: 231 LAKVIEDASLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDLKATQIYTHVTRDRL 290 Query: 180 AGLWERNNLINEK 192 ++ ++ +K Sbjct: 291 RDVYRHSHPRAKK 303 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 5/193 (2%) Query: 3 KRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +E++A++ A + RD L+ Y G RISE ++L D+D Sbjct: 124 LPETLSLEEMEALLAAASSPGDSNSLRDRALLEFLYASGARISEAMNLVLDDIDFETEPA 183 Query: 61 NIRR-LKNGFSTVHPLRFDEREAVERWT-QERANWKGADRT-DAIFISRRGSRLSRQQAY 117 +R K + L +A++ + + R ++ +F++ G +SRQ A+ Sbjct: 184 LVRLFGKGRKERISMLGHQACQALQAYLVRVRPTLAEKGQSRGRVFLNTYGKPMSRQTAW 243 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 II+ A A HPH LRH L + GAD R++Q+ LGH ++ T YT + Sbjct: 244 AIIQAAAKRAQIDRPVHPHTLRHCFATHLLQGGADIRVVQELLGHASVTTTEIYTKVSKQ 303 Query: 178 RFAGLWERNNLIN 190 ++ + Sbjct: 304 MLLEVYASAHPRA 316 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 3/197 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ +EV + ++ G R+ +I + + G+R+SEL++L +L L+EG I Sbjct: 113 LPEVLSTEEVDMIENSIDLSKPEGQRNKAIIEVLFSCGLRVSELVNLQLSNLYLDEGFIR 172 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWK-GADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ + + W +R K D +F++RRG+ L+R ++ Sbjct: 173 VTG-KGNKERLVPISPKAIKELNLWFLDRNLMKIKPGEQDYVFLNRRGAHLTRTMILIML 231 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + EAG PH LRH+ EL + GAD R IQ LGH +I T YT + Sbjct: 232 KRQAQEAGIQKTISPHTLRHSFATELLKGGADLRAIQVMLGHESIGTTEIYTHIDTTTLR 291 Query: 181 GLWERNNLINEKLKREE 197 ++ N K + +E Sbjct: 292 EEILLHHPRNAKDRPDE 308 >UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobacteria RepID=XERC_MYXXD Length = 300 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + + L +EV A++ G RD ++ L Y G+RISEL L D+D + + Sbjct: 108 TLPKVLPVEEVFAILDMPDVKTVLGLRDRAILELLYGGGLRISELCGLDLLDIDRSGRIV 167 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR----TDAIFISRRGSRLSRQQA 116 + K + P+ A+E + R R +A+F++ RG RL+ + Sbjct: 168 RVMG-KGSKERLVPVNAQSIRALEAYLARRGELLATIRKDQAPEAMFLNFRGGRLTPRSI 226 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 R + ++ + PH +RH+ L GAD R IQ+ LGH ++ T RYT Sbjct: 227 ARHLDTYVLKCALTRKVSPHAMRHSFATHLLGGGADIRSIQELLGHSSLSTTQRYTQVTW 286 Query: 177 ARFAGLWERNNLIN 190 + +++ + Sbjct: 287 EQLQQVYDSAHPRA 300 >UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJP7_MOOTA Length = 313 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 5/190 (2%) Query: 7 LTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 L+ E++ ++ G RD ++ Y G+R++EL+ + DLDL G + K Sbjct: 118 LSHAEMEKLLSIPATTPLGLRDRAILETLYASGIRVAELVGMDQDDLDLVAGYARVLG-K 176 Query: 67 NGFSTVHPLRFDEREAVERWT-QERANWKG---ADRTDAIFISRRGSRLSRQQAYRIIRD 122 V PL +A+E + + R A+F++ G RL+ + + Sbjct: 177 GRRERVVPLGRYAVKALENYLHRARPELAARRIPPEPRALFLNHLGGRLTTRGVRERLSH 236 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +A PH +RH L E GAD R++Q+ LGH + T YT + ++ + Sbjct: 237 YVEKAALRRGVSPHTIRHTFATHLLEGGADLRVVQELLGHIRLATTQIYTHISQSQLREV 296 Query: 183 WERNNLINEK 192 + + + + Sbjct: 297 YRQFHPRASR 306 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 4/186 (2%) Query: 7 LTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +T +++ ++ A G RD L+ L Y G+R+SE + L++ ++DL+ G I Sbjct: 108 ITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRGCITALG- 166 Query: 66 KNGFSTVHPLRFDEREAV-ERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + P+ + V +T+ R DA+F+S++ + +SRQ A+ I+++ Sbjct: 167 KGDKQRMVPMGQESAYWVGRYYTEARPALLKGRSCDALFVSQKKTGISRQLAWMIVKEYA 226 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 +AG PH LRHA L + G D R++QD LGH ++ T YT G+ + Sbjct: 227 SQAGIG-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVANVWLQGVVK 285 Query: 185 RNNLIN 190 ++ N Sbjct: 286 EHHSRN 291 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT ++V ++ A G GARD ++ L Y G+++SEL++L D+ L + Sbjct: 106 KPPKSLTVEQVDKLLSAPDSGTPQGARDKAMLELLYASGIKVSELVNLSIHDIHLEMRFL 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 G + P+ E+V + ++ R DA+F++ G+RL+RQ ++I Sbjct: 166 RCAVS-GGKERILPITPIAAESVAFYVRDMRDKLMRDAGEDALFLNSLGTRLTRQGFWKI 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G AG PH LRH+ L GAD R +Q+ LGH + T Y S Sbjct: 225 IKKYGKLAGIDEDITPHTLRHSFAMHLLGNGADLRSVQEMLGHSALSTTGMY-QSAKKSM 283 Query: 180 AGLWERNNLIN 190 +++ + + Sbjct: 284 KEVYDHYHPRS 294 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 10/199 (5%) Query: 4 RRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + ++ +EV ++ A G RD ++ + YR G+R+SEL+ L+ D++L+E + Sbjct: 115 PKAISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDDINLDESHLK 174 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 G + PL + ++ + + R A+F++ RG RL+RQ + I+ Sbjct: 175 CIGR--GKTRKVPLSQPAVDVLKLYLERSRPLLVRGQDEQALFVNHRGQRLTRQGFWLIL 232 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY----TASNA 176 + EAG PH LRH+ + + G D R +Q++LGH +I T Y + S++ Sbjct: 233 KAYASEAGI-KGITPHTLRHSFAAHMIDGGIDLRQVQEWLGHASITTTQVYRQIKSNSHS 291 Query: 177 ARFAGLWERNNLINEKLKR 195 + + R I E++ + Sbjct: 292 EKIIDIKSREERIPEEVAK 310 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 5/183 (2%) Query: 12 VQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFS 70 + ++ A RD L+ + Y G R SE+ L D+ L+EG + K Sbjct: 110 IDDLLTAPWSEDPYWRRDRALLEVLYATGCRASEVSGLRMDDVHLDEGYVKCEG-KGSKQ 168 Query: 71 TVHPLRFDEREAVERWT-QERANWKGADRTDA--IFISRRGSRLSRQQAYRIIRDAGIEA 127 + PL V+ + +ER + DA +F+SR G RLSR + +++ A Sbjct: 169 RIAPLAQKSARVVKTYLDEERPRLSKKNLRDAAFLFLSRSGKRLSRIAIWELVKKYAARA 228 Query: 128 GTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNN 187 G PH LRH+ L GAD R +Q+ +GH +I T YT + +R + + + Sbjct: 229 GIDPDVSPHSLRHSFATHLLAGGADLRHVQEMMGHASIATTQIYTHVDQSRLKKVHAQYH 288 Query: 188 LIN 190 Sbjct: 289 PRA 291 >UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes RepID=D2RKK7_ACIFE Length = 311 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L E+ +++ C G RD ++ Y G R+SEL+ L +DL Sbjct: 119 KLPVFLEEFEINLLLRMPDCTTVLGRRDRAILEFLYSTGCRVSELVGLTLTRVDLGNRY- 177 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWK----GADRTDAIFISRRGSRLSRQQA 116 I K + PL A+E + + A R +F++ RG LS + Sbjct: 178 AILLGKGRKERLVPLGHPCVAAMEDYLRHSRGTLMEKYQAPRHQTVFVNSRGRPLSARSV 237 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 RI+ PH +RH L + GAD R +Q+ LGH ++ T YT A Sbjct: 238 RRILDKYVEMTALQKHVSPHTIRHTFATHLLDHGADLRAVQELLGHVSLSTTQIYTHVTA 297 Query: 177 ARFAGLWERNNLIN 190 R ++E+++ Sbjct: 298 ERLTAVYEKHHPRA 311 >UniRef50_B1LMF8 Type 1 fimbriae regulatory protein, FimB family n=8 Tax=Escherichia coli RepID=B1LMF8_ECOSM Length = 209 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 101/187 (54%), Positives = 128/187 (68%), Gaps = 2/187 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 M R++LT E+ ++Q+V + +RD C+ILLAY HG+R+SELL L DL+L +I Sbjct: 1 MQNRKFLTHHEINLLLQSVRQKSCSSRDVCMILLAYFHGLRVSELLSLQLSDLELTTEKI 60 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA--NWKGADRTDAIFISRRGSRLSRQQAYR 118 I+R+KNGFSTVHPL+ +E A+ W ER N K + +F+SR G LSRQ+ Y Sbjct: 61 YIQRIKNGFSTVHPLQKEEVIAITNWLNERNSLNVKHFNDNPWLFVSRTGKPLSRQRFYN 120 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I+ AG AG + HPHMLRHACGY LA+ G DTRLIQDYLGHRNIRHTV YTASN+ R Sbjct: 121 IVSAAGKNAGLNIKVHPHMLRHACGYSLADNGVDTRLIQDYLGHRNIRHTVIYTASNSMR 180 Query: 179 FAGLWER 185 F +W R Sbjct: 181 FEKMWGR 187 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 3/175 (1%) Query: 17 QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLR 76 Q + G RD ++ L Y G+R++EL+ L+ +D+++N G I N V P+ Sbjct: 122 QPLNTTPKGIRDKAMLELLYATGIRVTELISLNLEDVNVNLGYIRCCN--NTKERVIPIG 179 Query: 77 FDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHP 135 A++++ R + + ++F++ G RL+RQ ++II+ +A P Sbjct: 180 TLSLIALQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQGFWKIIKVYTKQAAIEKSITP 239 Query: 136 HMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 H LRH+ L E GAD + +Q+ LGH +I T Y + ++ + + Sbjct: 240 HTLRHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQLTKHKIKDVYNKTHPRA 294 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 4/188 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +T ++ A++ A + G RD L+ + Y G+R++E + L D+DL+ G I Sbjct: 105 KLPTLITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDLHRGSI 164 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + PL + VER+ E R D +F+S++ S +SRQ A+ I Sbjct: 165 RTIG-KGDKLRLVPLGQEAAYWVERYCNESRPLLLKNKICDEVFVSQKRSGISRQLAWMI 223 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +++ AG + PH LRHA L G D R +Q LGH +I T YT R Sbjct: 224 VKEYAEAAGIAS-LSPHGLRHAFATHLVNHGVDLRSVQMMLGHSDINTTQIYTHVANIRL 282 Query: 180 AGLWERNN 187 + + ++ Sbjct: 283 KNMVDEHH 290 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 1/183 (0%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 S Y T E++ +M + R + + L Y G+R+SE L +DL G + Sbjct: 106 SLPVYCTRDEIEKIMAQFGHSPKDIRWHAIAELLYGCGLRVSECAALTMNQVDLELGMLR 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + P+ + V + T +FI+R G + + +I+ Sbjct: 166 IWG-KGNKERLVPMPKQTIKIVREYVDTVRPLYQKKPTSWLFITRLGKKTTTASIESMIK 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 I+AG PH LRH + E GAD R +Q+ LGH +I T YT + +R Sbjct: 225 SVCIQAGIQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSDITTTQIYTHIDRSRLRT 284 Query: 182 LWE 184 ++ Sbjct: 285 AYD 287 >UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium RepID=C4L615_EXISA Length = 293 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 5/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAV---CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 S + EV+ +++A ARD +I + Y G+R++EL ++ D Sbjct: 104 SLPTFAVPTEVEQLLEAASRQDDPFLQARDVAIIEVLYGTGIRVAELCGMNLSSFDEVLS 163 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR 118 +++ K P+ +A++R+ + R G A+F+S++G+R++ Q Sbjct: 164 FVHVMG-KGKKERYVPIGQYAVQALQRYIELRKGV-GLPTETALFLSQKGNRMTTDQIRY 221 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ ++G PH LRH+ +L ERGAD R +Q+ LGH ++ T RYT + R Sbjct: 222 VMKRLRKDSGVHKPLTPHSLRHSFATDLLERGADLRAVQELLGHESLSTTGRYTHVSTER 281 Query: 179 FAGLWERNNLI 189 +++ + Sbjct: 282 LRSIYQATHPR 292 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 4/192 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 +S L K V +++++ G RD L+ + Y GMR+SE+++ + D +E Sbjct: 104 LSLPHVLDQKTVSNLLESIDIQDIPLGCRDRALLEMIYACGMRVSEIINCKLESFDKDEA 163 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAY 117 + + K + + P+ +A++ + ++ R IF++ RG L+R++ Sbjct: 164 FVRVLG-KGNKTRLVPVGRSALDALQMYLEKGRPKLVRTGTKSHIFLTVRGRPLTRERIR 222 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 +I+R+ AG PH+LRH+ L E GAD R+IQ+ LGH +I T YT Sbjct: 223 QILRERARAAGLEQHVFPHILRHSFATHLLENGADLRIIQEMLGHADISTTQIYTHLEQQ 282 Query: 178 RFAGLWERNNLI 189 R + R + Sbjct: 283 RLNSIHHRFHPR 294 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 2/184 (1%) Query: 8 TGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 + EV+ ++ + RD ++ L Y GMR+SELL L DL G + K Sbjct: 113 SQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQFELGYLQCEG-K 171 Query: 67 NGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIE 126 + + P+ + VER+ Q+ N G T+A+F++ RG RLSRQ +++I+ Sbjct: 172 GERARIIPVSSVAQSFVERYIQQARNGLGGRETEALFLNGRGGRLSRQGFWKMIKRRAKL 231 Query: 127 AGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERN 186 AG + PH+LRH+ L E GAD R IQ LGH ++ T YT N +R ++ ++ Sbjct: 232 AGIEKEITPHVLRHSFATHLLENGADLRAIQQMLGHADLATTQVYTHVNKSRLHDVYRKH 291 Query: 187 NLIN 190 + Sbjct: 292 HPRA 295 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 3/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L EV+ ++ + + G RD + Y GMRISEL+ L D+D++ + Sbjct: 104 KLPVFLNFDEVEKLINSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMDMHREIM 163 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRI 119 + K P+ E ++ + R + +R + +F+SR G +L R+ + I Sbjct: 164 KVTG-KGSKQRFVPMYGSLAEKMKTYLDIRHDSLVKERDEGWLFLSRNGKKLDREYVWMI 222 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ AG PH LRH+ L GAD R IQ LGH ++ T RYT + Sbjct: 223 IKKYCERAGIKKNVSPHTLRHSFATHLLTNGADLRTIQVLLGHVDLSTTERYTQVTDNKA 282 Query: 180 AGLWERNNLI 189 + Sbjct: 283 RNTLLNCHPR 292 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 12/192 (6%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 S + LT +EV+ ++ + T RD + LL Y G+R+SEL +L D+D I Sbjct: 95 SLPKSLTREEVRKILSVIP--PTKKRDRLIFLLLYGAGLRVSELCNLKKSDVDFERSLII 152 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSR---LSRQQAYR 118 +R K V P+ E ++ + + R D ++ + + R R LS + + Sbjct: 153 VRGGKGAKDRVVPIPAFLLEGIKAYLETRD-----DDSEYLIVEDRRERKDKLSPKTVWY 207 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ G AG + PHMLRH+ + E G D R IQ+ LGH N+ T YT Sbjct: 208 LLKKYGDRAGI--RVTPHMLRHSFATHMLENGVDIRAIQELLGHSNLSTTQIYTKVTVEH 265 Query: 179 FAGLWERNNLIN 190 E+ LI Sbjct: 266 LRKAQEKARLIE 277 >UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobacteria RepID=Q0ACL7_ALHEH Length = 304 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 3/191 (1%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ E +++ + RD L L Y G+R++E + L LDL EG + Sbjct: 110 LPGVLSPDEAARLLEGSPEDDPLALRDRALYELIYSSGLRLAEAVGLDLGRLDLTEGLVE 169 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ REA++ W R GAD A+F+S+RG RLS + + Sbjct: 170 VVG-KGAKTRRVPVGGKAREALQAWLAVRPALAGAD-EPAVFVSQRGGRLSARSVQARLA 227 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +G HPHMLRH+ L E D R +Q+ LGH +I T YT + A Sbjct: 228 RLATLSGVGRPVHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQVYTHLDFQHLAR 287 Query: 182 LWERNNLINEK 192 ++++ + K Sbjct: 288 VYDQAHPRARK 298 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 5/191 (2%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ EV ++ G G RD + L Y G+R SEL+ L D+ EG + Sbjct: 117 LPDVLSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDLGDVFFAEGILR 176 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTD-AIFISRRGSRLSRQQAYRI 119 + K + P+ + + + + R +TD A+ ++ RG RLSRQ + I Sbjct: 177 VMG-KGSRERIVPIGGSAQRVLLDYLENGRPKLAKPSKTDGAVILNARGGRLSRQALHTI 235 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R AG G HPH LRH+ + E GAD R IQ+ LGH +I T Y + + Sbjct: 236 VRTAGATIG-RPDLHPHTLRHSFATHMLEGGADLRTIQEILGHSDISTTQIYVHVDRSHI 294 Query: 180 AGLWERNNLIN 190 + + Sbjct: 295 REEYLAAHPRA 305 >UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V602_9PROT Length = 317 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 4/192 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDL--DLNEGRI 60 + L+ + M+ RD + L Y G+R+ EL+DL + + D+ G + Sbjct: 126 LPQVLSPDQAVRMVDLPTDAPDSIRDKAMFELFYSSGLRLMELIDLDAESIRSDITAGEV 185 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + PL A+ W R A+F+ RG+R+S + + Sbjct: 186 RVTG-KGHKTRIVPLGGCAISALHEWLAVRPTLANIG-ERALFVGARGARISPRVVQLRM 243 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + GI+ G + HPHMLRH+ + + D R +Q+ LGH +I T YT + + Sbjct: 244 KQWGIKQGITSSVHPHMLRHSFATHVLQSSGDLRAVQEMLGHASISTTQVYTHLDFQYLS 303 Query: 181 GLWERNNLINEK 192 +++ + ++ Sbjct: 304 KIYDAAHPRAKR 315 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 6/192 (3%) Query: 4 RRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L +E++ + + G R+ ++ L Y GMR+SEL L DLDL+ + + Sbjct: 111 PSFLYEEELKELFTVSDVSTPLGQRNQAILELLYATGMRVSELCSLKESDLDLSMDTVLV 170 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERA---NWKGADRTD-AIFISRRGSRLSRQQAYR 118 K P EA+ + ++ KG DR D +F+++RG+ L+ + Sbjct: 171 HG-KGSKQRYVPFGSYAHEALITYLEDGRLKLKAKGKDRADAYVFLNQRGAPLTDRGVRF 229 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I+ + +A HPHMLRH L GAD R +Q+ LGH N+ T YT + Sbjct: 230 ILTELMKKASGTLHIHPHMLRHTFATHLLNEGADLRSVQELLGHSNLSSTQVYTHVSKDS 289 Query: 179 FAGLWERNNLIN 190 + ++ Sbjct: 290 LRKTYMSHHPRA 301 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 7/180 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 R LT ++V +++ T RD ++ L Y G+R+SEL+ L+ D+DL + Sbjct: 107 LPRALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVDLERNEV 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA---DRTDAIFISRRGSRLSRQQAY 117 KNG V P+ A+E + N T+A+F++ RG RL+RQ + Sbjct: 167 RCIG-KNGRVRVLPINGSAATALEEYFDISRNQLARGSGSSTEALFLNHRGKRLTRQGFW 225 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ E G + PH+LRH+ + G D R +Q+ LGH +I T YT N Sbjct: 226 LILKQYAEELGL-SDLTPHVLRHSFAVHMLNAGFDLRAVQELLGHTSISTTQIYTHLNHE 284 >UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychrobacter RepID=Q1QE98_PSYCK Length = 349 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 3/181 (1%) Query: 17 QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLR 76 RD + L Y G+R+ EL+ L D+DL + R+ + K + + PL Sbjct: 166 DTPEQARLWLRDKAMFELLYSSGLRVGELVALDIVDVDLADLRVRVTG-KGNKTRLVPLG 224 Query: 77 FDEREAVERWTQERANWKGADRTDAIFISRR-GSRLSRQQAYRIIRDAGIEAGTVTQTHP 135 +A+ R+ R W A+FIS + G+RLS + + ++ A AG +P Sbjct: 225 IKAADAIRRYLPHRNLWV-EQMDQALFISEKLGTRLSTRAVQQRLKVAATRAGIAQNMYP 283 Query: 136 HMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKLKR 195 H+LRH + D R +Q+ LGH +I T YT + A+ +++R + + + Sbjct: 284 HLLRHCFASHMLSGSGDLRAVQEMLGHSDISTTQIYTHVDFAKLTQVYDRAHPRATHVSK 343 Query: 196 E 196 + Sbjct: 344 D 344 >UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C57_SOLUE Length = 303 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 8/191 (4%) Query: 2 SKRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 +T +V +++ V ARD + L Y G+R+SEL L+ +D+D E Sbjct: 115 KLPEVMTADQVNSLIDGVGGVELERPHPARDRAIFELLYGCGIRVSELAGLNLEDIDRTE 174 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 G + +R K PL +++ER+ ER A A+F++ R +RL+ + Sbjct: 175 GWLRVRG-KGKKERQVPLPGQAAQSLERYLAERPV---AREQPAVFVNHRRARLTTRGIS 230 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ HPH RHA L GAD R IQ+ LGH + T +YT + Sbjct: 231 GIVKLYATYLSNDPGIHPHSFRHAYATHLLADGADLRAIQELLGHARLSTTQKYTQVSLT 290 Query: 178 RFAGLWERNNL 188 ++++ + Sbjct: 291 DLMAVYDKAHP 301 >UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S4_9FIRM Length = 302 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L E+ +++ G RD L+ Y G R+SEL+ L LDL+ Sbjct: 110 KLPVFLEEFEMNHLLELPDLSTELGQRDRALLEFLYSTGCRVSELVGLTLTRLDLSNRYA 169 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT----QERANWKGADRTDAIFISRRGSRLSRQQA 116 + K + PL A+ + + D IF++ RG+ L+ + Sbjct: 170 LLLG-KGHKERIVPLGHPCIRAMNAYLTGARRVLMEKYEVPSHDFIFVNHRGTPLTARSV 228 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 RI+ A PH +RH L + GAD R +Q+ LGH ++ T YT A Sbjct: 229 RRILDRYVEMASIQKHVSPHTIRHTFATHLLDHGADLRSVQELLGHASLSTTQIYTHVTA 288 Query: 177 ARFAGLWERNNLIN 190 R A ++++++ Sbjct: 289 DRIASVYKKHHPRA 302 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + KE+ + +AV GA R+ ++ + Y GMR+SE L + D+D + Sbjct: 106 KLPHFFYEKEMNMLFEAVYQAEGAQKLRNIAILEVLYGTGMRVSECAALQWSDIDFSMQT 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQ---ERANWKGADRTDAIFISRRGSRLSRQQA 116 I + K P +EA++ + + E K + +FI+ ++ Sbjct: 166 ILVLG-KGNKERYVPFGRYAKEALQNYRKNEWEPFLSKYKQTHNFVFINHYAKPITTTGI 224 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 I+ + + HPHMLRH+ L GAD R +Q+ LGH ++ T YT Sbjct: 225 EYILNQVITASSLNGKIHPHMLRHSFATALLNNGADLRTVQELLGHSSLSTTQIYTHVTK 284 Query: 177 ARFAGLWERNNLIN 190 + + + + Sbjct: 285 EKLQESYRKYFPRS 298 >UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriaceae RepID=D1AIZ1_SEBTE Length = 307 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 2/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT ++ + + TG RD +I Y G+R SEL+ L ++L E + Sbjct: 117 LPTVLTKDDINKLRNVIDISKVTGIRDRLIIEFLYSSGLRSSELVSLSELMINLEEREVR 176 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K V + R+ E++ + N + +F++ RG R++ + R+I Sbjct: 177 VLG-KGNKERVTFFSENARKWYEKYISAKRNEYKNYTPNIVFVNSRGERITTRSLRRLIA 235 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 D +AG + PH+ RH+ L D R +Q+ LGH +I T YT + A Sbjct: 236 DYAEKAGINKEVTPHVFRHSFATTLLNNKVDIRYLQELLGHSSISTTQVYTHVSKALLRE 295 Query: 182 LWERNNLINEK 192 ++ + + + ++ Sbjct: 296 IYIKAHPLADE 306 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 3 KRRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQD---LDLNE 57 + LT ++ +M+ ARD ++ L Y G R+SEL+ ++ D +D ++ Sbjct: 110 LPKALTISQIVSMIDVAYREGQPITARDQAMLELLYSSGARVSELIGINLNDLSSIDTSD 169 Query: 58 GRIN--IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADR--TDAIFISRRGSRLS 112 G++ R K + PL +AVE + + R + T A+F++ RGSR+S Sbjct: 170 GKVTTLKLRGKGAKERIVPLGSFATKAVENYLVRVRPDLASKSSKVTSALFLNSRGSRIS 229 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 RQ A++++ DA AG PH+ RH+ L GAD R++Q+ LGH ++ T YT Sbjct: 230 RQSAWQMVLDAADAAGITEHVSPHVFRHSYATHLLNGGADIRVVQELLGHASVTTTQIYT 289 Query: 173 ASNAARFAGLWERNNLIN 190 + + + Sbjct: 290 LITIDKVRESYALTHPRA 307 >UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular organisms RepID=XERC_RALPJ Length = 328 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 17/206 (8%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDL-------- 53 + L+ ++ A+M+ A RD + L Y G+R+SEL+ L + + Sbjct: 123 LPKALSVEQAVALMEQLPGDDAETIRDRAVNELFYSCGLRLSELVSLDMRHVKAGAYESA 182 Query: 54 ---DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD----AIFISR 106 DL + + K P+ EA+ W RA +D A+F+S Sbjct: 183 SWLDLEAREVQVLG-KGSKRRTVPVGTKATEALAAWLAVRAQLAKSDAAPEDAHALFLSP 241 Query: 107 RGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIR 166 RG RL+++Q ++ I AG HPH+LRH+ + + D R +Q+ LGH +I Sbjct: 242 RGKRLAQRQIQLRMKRNAIAAGVPADVHPHVLRHSFATHMLQSSGDLRAVQELLGHASIA 301 Query: 167 HTVRYTASNAARFAGLWERNNLINEK 192 T YT+ + A ++++ + +K Sbjct: 302 STQVYTSLDFQHLAKIYDQAHPRAKK 327 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 8/196 (4%) Query: 3 KRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 L+ +EV +++A A RD L+ Y G RISE + + ++D+DLNE Sbjct: 125 LPDVLSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVGVKFEDIDLNES 184 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQERAN---WKGADRTDAIFISRRGSRLSRQQ 115 + + K + P+ A+ + ++ KG IF+++RGS LSRQ Sbjct: 185 VVKLTG-KGSKQRLVPIGGCAVRALRNYMEKSRPELALKGKRELHTIFLNKRGSALSRQS 243 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A+ I+ AG A HPH LRH+ L GAD R +Q+ LGH ++ T YT + Sbjct: 244 AWEIVTQAGERAKLDKPLHPHTLRHSLATHLIAGGADVRTVQELLGHASVTTTQIYTHIS 303 Query: 176 AARFAGLWERNNLINE 191 + ++ + Sbjct: 304 PDALVEAYVMSHPRAK 319 >UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE10_9GAMM Length = 292 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 6/192 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 S + L + + M+ + RD ++ + Y G+R+SEL+ L +D+D ++G + Sbjct: 106 SLPKTLDYERLVQMLTPKSSAFSELRDAAMVEVLYSCGLRVSELVGLDIEDVDASQGFLR 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K PL ++++ R+ Q K + A+F++ R R+S + II+ Sbjct: 166 VMG-KGSKVRYTPLGESAQKSINRYLQ-----KTSHTNKALFVNNRQERISTRTVQNIIK 219 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + + G HPHMLRHA + D R +Q++LGH++I+ T YT + + Sbjct: 220 NRALSVGIKVNVHPHMLRHAAATHFLQSSHDLRSVQEFLGHKSIKSTQVYTHLDFLELSK 279 Query: 182 LWERNNLINEKL 193 ++++ + +K Sbjct: 280 VYDKCHPRAKKS 291 >UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY7_9ZZZZ Length = 298 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 LT +E+ ++ + A RD + + Y G+R++EL D D+ + I Sbjct: 107 KLPNVLTIQEIDKILGIIPENAPMAQRDLAIFEMMYSCGLRVTELCDFKTSDILWDSEMI 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDA-IFISRRGSRLSRQQAYR 118 ++ K P+ RE ++ + ER + A +F+SR G +L+R + Sbjct: 167 RVQG-KGSKQRFVPIGPIARENLKNYLNHERNTLADKNPNVAEVFLSRNGRKLTRMMIWV 225 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ A + PH LRH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 226 LLKKWTESAEVKKEVSPHTLRHSFATHLLEGGADLRSVQEMLGHTDITTTQVYTHLDKEH 285 Query: 179 FAGLWERNNLI 189 + + Sbjct: 286 LKEVHRTYHPR 296 >UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococcaceae RepID=XERC_STAA2 Length = 298 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 3/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++ +E++A+ + V + RD ++ L Y G+R+SEL+++ QD+D + Sbjct: 106 LPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDFYANGVT 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K P R+++E + + + + D + ++ +G ++ + ++ Sbjct: 166 VLG-KGSKERFVPFGAYCRQSIENYLEHFKPIQSCN-HDFLILNMKGEAITERGVRYVLN 223 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 D V++ HPH LRH L +GAD R +Q LGH N+ T +YT + + Sbjct: 224 DIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRK 283 Query: 182 LWERNNLINEK 192 ++ + +K Sbjct: 284 VYLNAHPRAKK 294 >UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetales RepID=XERC_CORGL Length = 308 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 6/190 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L ++ ++ RD ++ L Y GMR++EL + D+D + + Sbjct: 123 LPKILGEQQAGDFVENAASTNEEEFLRDSAILELLYATGMRVAELCGIDLSDIDYDRKMV 182 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K V P +A+ W R + A+F+ RG R++ +Q RI+ Sbjct: 183 RVLG-KGNKERVVPFGESAHKALRNWLDVRDEM--TEDPKALFVGVRGQRINARQVRRIV 239 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 A G PH LRH L + GAD R +Q+ LGH +++ T YT + R Sbjct: 240 DRAAKVTGV-DHLSPHSLRHTAATHLLDGGADLRQVQELLGHSSMQTTQIYTHVSNKRLL 298 Query: 181 GLWERNNLIN 190 + + + Sbjct: 299 EAFNKAHPRA 308 >UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium RepID=D2Q578_9BIFI Length = 306 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 15/202 (7%) Query: 2 SKRRYLTGKEVQAMMQ------------AVCYGATGARDYCLILLAYRHGMRISELLDLH 49 + L+ + + +M +V A G R+ ++ + Y G+R++EL+ L Sbjct: 107 TLPAVLSESQAEKLMDCVDEQMPKSRTKSVRKQAVGLRNAAMLEVLYATGIRVAELVGLD 166 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRG 108 D+ + + + K V P +++ RW ++ R A DA+F+ +G Sbjct: 167 VHDVAFDNRTMKVTG-KGNKQRVVPFGVPAEQSIRRWLEDGRPRLVRARSADALFLGAQG 225 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 +R+ ++ +++ + AG PH LRH+ L + GAD R +Q+ LGH +++ T Sbjct: 226 NRIDQRVVRQVVHECAQRAGVP-DISPHALRHSAATHLLDGGADLRQVQELLGHSSLKTT 284 Query: 169 VRYTASNAARFAGLWERNNLIN 190 RYT + + + + Sbjct: 285 QRYTHVSIEQLKARYGQAFPRA 306 >UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 Length = 313 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 3/198 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +T +E+ ++ ++ G R+ ++ Y G+R+SEL +L +L EG I Sbjct: 111 KLPEVMTVEEIDLLIGSIDRSTKEGQRNRAILETLYSCGLRVSELCNLKLSELYFEEGFI 170 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWK-GADRTDAIFISRRGSRLSRQQAYRI 119 + K + P+ + + + +R K D +FIS G +SR + I Sbjct: 171 KVEG-KGSKQRLVPISPRAIKEIRLYFTDRNLMKIKPGFEDFVFISNFGKNISRIMVFHI 229 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I++ G + PH RH+ L E GA+ R IQ LGH +I T YT + Sbjct: 230 IKELAARIGLKKKISPHTFRHSFATHLLEGGANLRAIQCMLGHESIGTTEIYTHIDRNML 289 Query: 180 AGLWERNNLINEKLKREE 197 ++ N K + ++ Sbjct: 290 RSEIIEHHPRNIKFREKD 307 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R L ++ A+MQ + + RD L+ + Y G+R+SE + L D+DL+ + + Sbjct: 109 LPRTLPPEQTAALMQ-PTHASADRRDLALLAVMYGAGLRVSEAVGLDLHDIDLHSCELRV 167 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + PL + + +W ER A+F++R G RL+ + R+++ Sbjct: 168 LG-KGSKQRIVPLPTTAADLLGQWLDER-LLGLVRDERAVFLNRFGQRLTARSVQRMLKT 225 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +E+G PH LRH+ L G D R IQ+ LGH ++ T RYT + A+ + Sbjct: 226 RALESGADISVTPHRLRHSFATHLLAGGVDLRAIQELLGHASLATTERYTHLDIAKLTEV 285 Query: 183 WERNNLINEK 192 ++R++ + Sbjct: 286 YDRSHPRAGR 295 >UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBK4_9FIRM Length = 311 Score = 208 bits (531), Expect = 7e-53, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 2/191 (1%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 Y ++++ ++ + D ++ L Y G+R+SE L Q + L +G + + Sbjct: 123 YFNMQDIERLLDSFRDSDAEIMDKAIVELLYGCGLRVSECCSLMLQQVYLEQGFLRVIG- 181 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + P+ ++A+E + + + A R++ +FI+ +G ++RQ + +I+ + Sbjct: 182 KGNKERMVPMHARCKKALENYLTKVRKQRYA-RSNFVFINAKGQEITRQYIHVMIKKRLL 240 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 G + H RH+ L + GAD R++Q+ LGH +I T YT R ++ Sbjct: 241 ALGLDERLSAHSFRHSFASHLLDGGADLRVVQELLGHSDISTTQIYTHVQNKRLQSVYTS 300 Query: 186 NNLINEKLKRE 196 + +K K + Sbjct: 301 FHPRAKKHKED 311 >UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S88_SHEDO Length = 321 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 2/195 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + + + ++ RD ++ L Y G+R+ EL L+Y D+ L + Sbjct: 128 PLPKNIDVDAISHLLAIDGDDPLVIRDRAIMELFYSSGLRLGELASLNYGDIHLGLQEVK 187 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K G P+ EA+ W +R AD A+F+S +G RLS + + Sbjct: 188 VLG-KGGKERRVPVGKLAMEALALWHTQRLLLVQAD-EPALFVSNQGKRLSHRSIQARMA 245 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G HPH LRH+ + E D R +Q+ LGH N+ T YT+ + A Sbjct: 246 KWGQNQALSVPVHPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTSLDFQHLAK 305 Query: 182 LWERNNLINEKLKRE 196 +++ + +K + + Sbjct: 306 VYDGAHPRAKKGREK 320 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 28/215 (13%) Query: 3 KRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 L+ EV+ ++ A A RD L+ Y G R+SE + L ++D+DL E Sbjct: 121 LPDVLSISEVERVIDAAGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFEDIDLTES 180 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDA---------------- 101 + + K + P+ A+ + R + Sbjct: 181 VVRLSG-KGQKQRLVPIGKCAVRALRDYLANARPILASRAQKSPATAKSRLKSPLNSSSK 239 Query: 102 ------IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRL 155 IF+++RG LSRQ A+ I AG A + HPH LRH+ L GAD R Sbjct: 240 SANTHVIFLNKRGKSLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISGGADVRT 299 Query: 156 IQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 +Q+ LGH ++ T YT + + ++ Sbjct: 300 VQELLGHASVTTTQIYTHISPDALMEAYVMSHPRA 334 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 6/190 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 R L + M + RD ++ L Y GMR+SEL L D+D + + Sbjct: 125 LPRVLGEVQAGEFMGSAAADTEDEFRRDSAILELLYATGMRVSELCGLDLGDVDHHRRMV 184 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P +A+E+W + R A DA+F+ RG R+ +Q RI+ Sbjct: 185 RVLG-KGDKERMIPFGKAAADALEQWLEARDRM--AKVEDAMFVGVRGGRIDARQIRRIV 241 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 AG PH LRH L + GAD R +Q+ LGH +++ T YT ++ R Sbjct: 242 DRTAQVAG-ADHLSPHSLRHTAATHLLDGGADLRQVQEMLGHSSLQTTQIYTHVSSQRLL 300 Query: 181 GLWERNNLIN 190 + + + Sbjct: 301 EAFRQAHPRA 310 >UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUW8_9GAMM Length = 308 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 3/184 (1%) Query: 8 TGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLK 66 + EV A++ A G RD ++ Y G+R+SEL+ L LDL G + + K Sbjct: 125 SEGEVDALLAAPDRRTVLGLRDAAMLETLYATGLRVSELVGLLCSQLDLEAGVV-LTLGK 183 Query: 67 NGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 + P+ E + R+ +E R G ++ A+F++ RG +SRQ+ ++ I+ Sbjct: 184 GSKERLIPVGEVALETLHRYLREARGALLGHKQSPALFLTVRGEAMSRQRFWQTIKAHAT 243 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 +AG + PH LRHA L + GAD R +Q LGH + T YT AR L + Sbjct: 244 KAGIRSAFSPHSLRHAFATHLLDHGADLRSVQLMLGHAQLNTTEIYTHIAQARLQNLHRQ 303 Query: 186 NNLI 189 ++ Sbjct: 304 HHPR 307 >UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales RepID=XERC_CHLFF Length = 312 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 2/183 (1%) Query: 7 LTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 +T ++V+ +M TG RD CL+ L Y G+RISE++ L++ D+D N I IR Sbjct: 129 ITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVSLNHWDIDFNSNLIRIRG- 187 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + P+ + ++++ A + AIF++ G+RL+ + R + Sbjct: 188 KGKKERIIPITTLAAQWLKQYLNHPERAGVAKDSQAIFLNCFGTRLTTRSIDRKFQKYLR 247 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 +G PH +RH E G D + IQ LGH ++ T YT + Sbjct: 248 LSGLSGNITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSMKLKKQTHNE 307 Query: 186 NNL 188 ++ Sbjct: 308 SHP 310 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 4/190 (2%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V ++ A C RD ++ + Y G R++E++ L + L EG Sbjct: 127 LPKVLSPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIVTLPLNSVKLTEGYAR 186 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTD-AIFISRRGSRLSRQQAYRI 119 K + L AVE + + ER + T+ A+F++R G +LSR + I Sbjct: 187 CVG-KGNKERMVSLNPVAVAAVEAYLRHERPVLTRRNTTEQALFLNRGGKQLSRVMVWNI 245 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ G + PH LRH+ + GA+ R +Q+ LGH NIR T YT + +R Sbjct: 246 VKKNAARVGCSKEVSPHTLRHSFATHMMAGGAEIRALQELLGHANIRTTQIYTHVDHSRL 305 Query: 180 AGLWERNNLI 189 + + + Sbjct: 306 KAVHQMYHPR 315 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 5/194 (2%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ +V ++ G G R+ C + L Y G+R SEL L D L+EG + Sbjct: 123 LPDVLSIDQVNTLLDQEFREGPLGVRNACALELLYGCGLRASELSGLDAGDAFLDEGILR 182 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRGSRLSRQQAYRI 119 I K + P+ + + ++ + R T A+ ++ RG RLSRQ + I Sbjct: 183 IVG-KGSRERIVPIGGSAARCLASYLEDARPLLRSPRRLTPAVMLNARGGRLSRQSIHSI 241 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R+AG G HPH LRH+ L E GAD R IQ+ LGH +I T YT + Sbjct: 242 VREAGHVIGI-KDLHPHTLRHSFATHLLEGGADLRAIQEMLGHSDISTTQIYTHVDRTHV 300 Query: 180 AGLWERNNLINEKL 193 + + + Sbjct: 301 REEYLSAHPRAKAA 314 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 5/196 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ E+ ++ G RD ++ L Y G+R+SEL+ +H D D ++G I Sbjct: 111 LPNILSQDEMLRLLTTPDITNKLGFRDKVILELLYASGIRVSELIGVHVLDFDQDKGIIK 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K G PL + + + Q+ R + ++ +F++R G L+RQ ++II Sbjct: 171 VFG-KGGKERYIPLHSSAMKLLIHYVQKIRPMFTPIEK--FLFLNRSGKGLTRQAIWKII 227 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + A PH RH L E GAD R +Q LGH ++ T YT + R Sbjct: 228 KRYALLASINKSISPHTFRHTFATHLLEGGADLRSVQLLLGHVDMSATELYTHVQSDRLK 287 Query: 181 GLWERNNLINEKLKRE 196 + + + + E Sbjct: 288 YIHSMFHPRSNYVSSE 303 >UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepID=XERC_CHLT2 Length = 315 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 2/185 (1%) Query: 7 LTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 LT ++V A+M A TG RD CL+ L Y G+RISE+ L+ D+D ++IR Sbjct: 129 LTYEQVLALMAAPELDKVTGFRDRCLLELFYSSGLRISEITALNRADIDFQSHLLHIRG- 187 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + P+ + ++ + A F++R G RLS + R + + Sbjct: 188 KGKKERIVPMTKVAVQWLQDYLNHPDRASVEQDHQACFLNRFGKRLSTRSIDRKFQQYLL 247 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 + G PH +RH ERG D + IQ LGH ++ T YT + + + Sbjct: 248 KTGLSGSITPHTIRHTIATHWLERGMDLKTIQLLLGHTSLETTTIYTHVSMKLKKQIHDE 307 Query: 186 NNLIN 190 + N Sbjct: 308 THPHN 312 >UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQI4_9BACT Length = 292 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 9/193 (4%) Query: 3 KRRYLTGKEVQAMM----QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 YL+ E++ ++ +A+ R+ +I L Y G+RISEL L + G Sbjct: 104 LPDYLSLPEIERLLHIYDEAI---PLQFRNKFIIELLYSCGLRISELCGLRTDSFNYESG 160 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAY 117 + ++ K P ++ + R + + +S G L+R + + Sbjct: 161 FLRVKG-KGSKERSVPFGTQVASMSRQYIKNIRPQLCKKNNPPELIVSNNGRPLTRSRVW 219 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 + +++A I+A HPH+LRH+ L AD R+IQ+ LGH +I T YT Sbjct: 220 QFLKEAAIKAEINKNLHPHVLRHSFASHLLSNNADLRIIQELLGHADIATTEIYTHVEKT 279 Query: 178 RFAGLWERNNLIN 190 R + ++ Sbjct: 280 RLQNIHQKFFPRA 292 >UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobia RepID=B2UMQ9_AKKM8 Length = 300 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 18/203 (8%) Query: 1 MSKRR-----YLTGKEVQAMMQAVCYGATGA--------RDYCLILLAYRHGMRISELLD 47 + +R+ +LT ++ +++ A A RD ++ L Y GMR+SEL+ Sbjct: 103 LPRRKKTLPVFLTLNQMLELLELPYKTAVPANAPAWLPYRDAAILELFYSCGMRLSELVG 162 Query: 48 LHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRR 107 L +D + + K + P+ A+E + + + +F+SR Sbjct: 163 LDVGSVDHRFRGVKVMG-KGRKERILPVGTPALAALETYV----SMACLPKNSPLFVSRI 217 Query: 108 GSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRH 167 G+RLS + ++ + PH +RH + E GAD R +Q+ LGH ++ Sbjct: 218 GTRLSARSVQMMLNKYVKLSSIPFTISPHKIRHTFATHILEAGADLRSVQELLGHASLST 277 Query: 168 TVRYTASNAARFAGLWERNNLIN 190 T YT AR A ++ + + Sbjct: 278 TQIYTHVTRARMAEVYRQAHPRA 300 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 4/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 YLT +VQ ++ + G R+ C++ L Y G+RISE ++ QD+ + + Sbjct: 109 PLPEYLTVDQVQDLLDSFDLEDKKGLRNRCIVELLYACGLRISECANIKIQDIHFRDYYV 168 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P + + + ++ ++ ++ +D F +G +S + ++ Sbjct: 169 RVMG-KESKERIVPFYKELGDLLTKYLKKYGSFSQL--SDPFFKGSKGKAISVRSIQLLL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 G E Q HPH+LRH+ L + GAD R++Q LGH N+ T YT + Sbjct: 226 EKKGRELKLPFQLHPHVLRHSFATHLLDNGADLRIVQSLLGHENLSTTQIYTHVSQDTLR 285 Query: 181 GLWERNNLINEK 192 + + ++ K Sbjct: 286 RVIAETHPLSHK 297 >UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYI3_9BACT Length = 312 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 6/193 (3%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 L ++ ++ A RD ++ L Y G+R++EL L+ D+DL + Sbjct: 113 KLPNSLDPDQISQVLNATITSDDPMAMRDKAMLELTYSCGLRLAELASLNVFDIDLTDAS 172 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K + P+ A++ W Q+R K D +A+FI+ RG R+ + Sbjct: 173 LIVTG-KGNKTRQLPIGRQAITALKSWLQQRGQLKCHD-ANALFINHRGQRMGVRGIQ-- 228 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R A + A HPHMLRH+ L + D R +Q+ LGH NI T YT + Sbjct: 229 MRMANMAATHGQHIHPHMLRHSFASHLLQSSGDLRAVQELLGHSNISTTQVYTHLDYQHL 288 Query: 180 AGLWERNNLINEK 192 A ++++ + ++ Sbjct: 289 AKVYDKAHPRAQE 301 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 3/173 (1%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 R L+ L Y G RISE + L DLDL + + K G + PL Sbjct: 242 PAEAVRRLRATALLELLYGTGARISEAVGLDVDDLDLEAASVRLHG-KGGRDRIVPLGRY 300 Query: 79 EREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHM 137 AV + + R A+F+SRRG+RLSRQ A+ ++R A + AG PH+ Sbjct: 301 AIAAVADYLRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVLRTAALAAGVEG-VSPHV 359 Query: 138 LRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 LRH+ L + GAD R++Q+ LGH ++ T YT R ++ ++ Sbjct: 360 LRHSFATHLLDGGADVRVVQELLGHASVSTTQIYTLVTVDRLREVYAASHPRA 412 >UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW74_CHLT3 Length = 336 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 79/167 (47%), Gaps = 6/167 (3%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ + Y G+R++EL+ L+ +LD G + + K + PL ++ ++ + Sbjct: 169 RDRAILEMFYSCGLRLAELIGLNIMELDFQNGFVKVLG-KGRKQRIIPLGESAQKTLKNY 227 Query: 87 TQERANWKGADRT-----DAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHA 141 + + + R+ +A+F++ +G R+ R+++ + PH+LRH Sbjct: 228 LEIKKKFFEMKRSNVLEREAVFVTEKGKRVYPVLVQRLVKKYLSPVTEQKKKSPHVLRHT 287 Query: 142 CGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNL 188 L GAD R + + LGH N+ T YT + R ++++ + Sbjct: 288 FATHLLNNGADLRSVSEMLGHSNLSTTEIYTHISFERLKQVYQQAHP 334 >UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related protein n=4 Tax=Thermoplasmatales RepID=Q9HIM5_THEAC Length = 283 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 YL+ E + +++A R Y ++ + G+R+ EL +L D+DL E IN+R Sbjct: 104 YLSEDEAKRLIEAASSDT---RMYAIVSVLAYTGVRVGELCNLKISDVDLQESIINVRSG 160 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + + + +A+ + R + D +F+S R R R+IRD G Sbjct: 161 KGDKDRIVIMAEECVKALGSYLDLRLSM--DTDNDYLFVSNRRVRFDTSTIERMIRDLGK 218 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 +AG + PH+LRH + G D R IQ LGH ++ T YT N + ++ + Sbjct: 219 KAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLNDSALREMYTQ 278 Query: 186 NNLI 189 + Sbjct: 279 HRPR 282 >UniRef50_A9KMU3 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMU3_CLOPH Length = 291 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 5/191 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 ++ RYLT ++V +++ A G RD ++ L Y GM++SE+ L +D++L G Sbjct: 105 IAPPRYLTKEQVLSLLSAPDSNTKRGLRDKAMLELMYATGMKVSEIGGLKKEDINLKFGC 164 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + +R LK + V P R ++E + + + + +F+ R+G ++RQ ++I Sbjct: 165 VTVRELK--KNRVVPFGQAARASLEAYLASEDDVR--KESPYLFLGRQGEPMTRQGVWKI 220 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ G + G P +R++ + E GAD +++ +GH NI T YT Sbjct: 221 MKYYGKQIGLEEDLTPQAIRNSFAIHMIENGADLNSMKELMGHANITATQHYTKQRIGET 280 Query: 180 AGLWERNNLIN 190 G + + + Sbjct: 281 FGTYHKTHPRA 291 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 16/202 (7%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT------------GARDYCLILLAYRHGMRISELLDLHY 50 L + +++M V A G R+ ++ L Y G+R+ EL L+ Sbjct: 123 LPSVLDEYQAESLMNNVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIRVGELTSLNI 182 Query: 51 QDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQE--RANWKGADRTDAIFISRRG 108 QD++ + I + K V P +A+ W + R +A+F+ RG Sbjct: 183 QDINFSSHTIKVTG-KGNKQRVVPFGVPAYKALSAWISKDGREILLRNSVEEAVFLGTRG 241 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 R+ ++ +I+ D A V PH LRH+ + GAD R +Q+ LGH ++ T Sbjct: 242 KRIDQRLVRQIVHDEAKSA-HVPDISPHALRHSAATHMLNGGADLREVQELLGHSSLNTT 300 Query: 169 VRYTASNAARFAGLWERNNLIN 190 RYT + + + Sbjct: 301 QRYTHVSIESLKRKYSQAFPRA 322 >UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3Y9_9PLAN Length = 314 Score = 206 bits (524), Expect = 4e-52, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 6/192 (3%) Query: 4 RRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ ++ A Y RD L+ L Y G R SE+ + +DL + + Sbjct: 124 PDVLSPTVAARLLDAPQPYDPLFRRDRALLELLYATGCRASEVSVMEVRDLRIEDRFCLA 183 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADR---TDAIFISRRGSRLSRQQAYR 118 R K + PL AVE + + ER + + +S RG RL+RQ+ + Sbjct: 184 RG-KGSKERLVPLGDPALAAVEAYLEHERPKLAAKSKQGVPPWLLLSSRGQRLTRQKIWE 242 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ + G PH LRH+ L GAD R +Q+ LGH +I T YT + +R Sbjct: 243 LVKQYALRCGAPASMSPHTLRHSFATHLLSGGADLRQVQELLGHASIGTTQIYTHVDQSR 302 Query: 179 FAGLWERNNLIN 190 + + + Sbjct: 303 LKKIHSQFHPRA 314 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 5/192 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT E+ ++ G RD ++ L Y G+R+SEL L D D G + Sbjct: 129 LPDVLTRDEMATILARPDLSDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVR 188 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ V + ++ R + + A+F++R G LSRQ ++++ Sbjct: 189 VFG-KGAKERIVPVHHVSCALVTAYLRDWRPAF--SPVEPAMFLNRSGKGLSRQAVWKVV 245 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + EAG PH RH+ L E GAD R +Q LGH +I T YT A R Sbjct: 246 KRHVAEAGIHKDISPHTFRHSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLR 305 Query: 181 GLWERNNLINEK 192 + ++ + Sbjct: 306 RIHNAHHPRTRR 317 >UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC Length = 301 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 5/194 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + R+ E+QA+ +V R+ L+ + Y G+R+SE L D+D + Sbjct: 109 LRLPRFFYENEMQALFDSVAGDSPLDLRNRALLEVLYGSGIRLSECSSLSVSDIDFDSEV 168 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANW---KGADRTDAIFISRRGSRLSRQQA 116 + I K PL ++A++ + +E K + D +F++ G ++ Sbjct: 169 MLIHG-KGNKERYAPLGSFAQDALQEYFREGRQVLMTKYHEEHDIVFVNHHGKPITPTGI 227 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 ++ ++ + HPHMLRH L GAD R +Q+ LGH N+ T Y Sbjct: 228 EYVLNQMIKKSSLDSDIHPHMLRHTFATHLLNNGADLRTVQELLGHANLSTTQIYAHVTK 287 Query: 177 ARFAGLWERNNLIN 190 + + Sbjct: 288 ESLQKNYRSFHPRA 301 >UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomycetales RepID=D2NUA7_9MICC Length = 437 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 17/204 (8%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLN----- 56 + ++ +++Q ++ ATG R+ ++ Y G R+SE+L+ D+ Sbjct: 231 LPKAVSVEDIQRLLAVPDRETATGLRNRAILEFLYATGARVSEMLNADIDDVHFEGTLTD 290 Query: 57 --------EGRINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADR-TDAIFISR 106 G + + K + P+ ++A++ + + R + + T A+F++ Sbjct: 291 EDGNQITLPGYVRLFG-KGNKERLVPIGSYAQKAIQDYLVRARPSLVAHGKGTAALFVNG 349 Query: 107 RGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIR 166 RG RL RQ A+ I+++A AG + PH +RH+ L + GAD R++Q+ LGH +I Sbjct: 350 RGGRLGRQGAWLILKEAAEAAGLSSDFSPHSMRHSFATHLLQGGADIRVVQELLGHASIA 409 Query: 167 HTVRYTASNAARFAGLWERNNLIN 190 T YT ++ + Sbjct: 410 TTQVYTKVTPEGLMEVYRMAHPRA 433 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 89/222 (40%), Gaps = 34/222 (15%) Query: 3 KRRYLTGKEVQAMMQAV----CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 + L + + ++ A G G RD L+ L Y G RISE++ L D+DL G Sbjct: 131 LPKALPVEAIGRLLDAAGSADPDGPRGLRDRALLELLYATGARISEVVGLDVDDIDLGPG 190 Query: 59 RINIR-----------------------RLKNGFSTVHPLRFDEREAVERWT-QERANWK 94 R+ R K + P+ A+E + + R Sbjct: 191 RLAGRSSTDPTDPTDPQVAPPITSVVRLHGKGAKERLVPVGSFALRALEAYLVRGRPVLA 250 Query: 95 GADRTDA-----IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQ-THPHMLRHACGYELAE 148 A R +F++ RG RLSRQ A++++ DA AG PH LRH+ L E Sbjct: 251 AAGRGAGPARGALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHSFATHLLE 310 Query: 149 RGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 GAD R +Q+ LGH ++ T YT ++ + Sbjct: 311 GGADVRSVQELLGHASVTTTQIYTLVTVDALREVYVTAHPRA 352 >UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV23_9GAMM Length = 345 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 8/197 (4%) Query: 2 SKRRYLTGKEVQAMMQAVC-----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 L + ++ RD ++ L Y G+R+ EL+ L+ D+D + Sbjct: 151 PLPTLLDIDVLSQLLDQAAPEDSHEARLWIRDKAMLELLYGSGLRVGELVGLNMSDIDKS 210 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRR-GSRLSRQQ 115 + + + K G + + P+ +A+ + R+ W ++ A+F+S R G+R+S + Sbjct: 211 QRLLRVLG-KGGKTRIVPIGEKAWQALINYLPHRSLWV-EEQDPAVFVSERYGTRISTRT 268 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 I+ AG +PH+LRH + D R +Q+ LGH +I T YT + Sbjct: 269 VQLRIKLQAKRAGVAQDLYPHLLRHCFASHILSDSGDLRGVQELLGHSDISTTQIYTHLD 328 Query: 176 AARFAGLWERNNLINEK 192 + ++++ + + + Sbjct: 329 FGHLSQVYDKAHPRSRR 345 >UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betaproteobacteria RepID=Q0AFS1_NITEC Length = 321 Score = 205 bits (522), Expect = 7e-52, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 4/198 (2%) Query: 2 SKRRYLTGKEVQAMM--QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 L+ E ++ RD + L Y G+R++EL L D+D G Sbjct: 126 KLPHALSPDEAAQLLTFNPSSNDMLATRDLAIFELFYSSGLRLTELTQLQPTDIDFTGGT 185 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K + + P+ A++ W R+ W T A+F+S+RG R+ + Sbjct: 186 VRVTG-KGNKTRIVPVGELALRALQAWLPLRSAWLIPGET-ALFLSQRGRRIHPRTIAYR 243 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + ++ HPH LRH+ L + D R +Q+ LGH +IR T YT + Sbjct: 244 LHQRAQLQNLDSRVHPHTLRHSFASHLLQSSGDLRAVQEMLGHSSIRSTQVYTHLDFQHL 303 Query: 180 AGLWERNNLINEKLKREE 197 A ++++ + K + + Sbjct: 304 AKIYDQAHPRARKKPKTD 321 >UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z4_9BACT Length = 314 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 2/167 (1%) Query: 26 ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVER 85 ARD ++ + Y G+RISE L D+DL G +R K + L ++A+ Sbjct: 149 ARDLAMVEVIYSGGLRISETTGLDMGDIDLIGGIARVRG-KGKKERIAVLGRPSQKALRN 207 Query: 86 WTQERANWKGADRT-DAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGY 144 + + R+ G +F+++ G RL+ + R +++ I A PH LRH+ Sbjct: 208 YFKLRSTVGGGRAPGSPVFLNKFGKRLTPRSFQRNLKNYLIAANLPPDLTPHKLRHSFAT 267 Query: 145 ELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINE 191 L + GAD R +Q+ LGH N+ T YT +A R +++ + + Sbjct: 268 HLLDAGADLRSVQEMLGHENLSTTQIYTHVSAERMKEVYKEAHPRAK 314 >UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHX4_HALO1 Length = 395 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 8/178 (4%) Query: 23 ATGARDYCLILLAYRHGMRISELLDLHYQDLD---LNEGRINIRRLKNGFSTVHPLRFDE 79 RD + + Y G+R+ E L D+D L+ + +RR K G + PL Sbjct: 186 PLKLRDRAIAEVLYGSGLRVGECCALDLDDIDRARLSSALVRVRRGKGGKERIVPLGRQA 245 Query: 80 REAVERWTQERANWK----GADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHP 135 A++ + R + GA A+F+S RG+RL+ + R+I E G + P Sbjct: 246 VAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRMIGRNAQEVG-AYEATP 304 Query: 136 HMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKL 193 H LRH+ L + G D R IQ+ LGH ++ T YT + +++ ++ Sbjct: 305 HALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKVSLDHLMNVYDASHPRARAS 362 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 4/188 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +YLT +E+ ++ ++ G RD LI L Y G+RISE L + +DL + Sbjct: 110 LPQYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEALGIKLSQIDLENEWLMP 169 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + PL +E + W +E TD I ++ G +SR A++I++ Sbjct: 170 IG-KGNKQRLVPLGSKAKENLRAWIEEGRPL-THPTTDNIILNAHGKPMSRMGAWKIVQL 227 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 + Q PH RH+ E G D R++Q+ LGH +I T YT + Sbjct: 228 HTMH--LSKQVSPHTFRHSFATHCLEAGMDLRVLQELLGHADISTTQIYTHVDKDFIKQE 285 Query: 183 WERNNLIN 190 + Sbjct: 286 HRSFHPRE 293 >UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XL74_9BACT Length = 337 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 16/203 (7%) Query: 3 KRRYLTGKEVQAMM-------QAVCYGATGA--------RDYCLILLAYRHGMRISELLD 47 ++LT +++ ++ G RD ++ Y G+RISEL Sbjct: 136 LPKFLTAQQMVELLGAPLKPLATPKKKGPGRPISATVCYRDVAILETIYSCGLRISELCG 195 Query: 48 LHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRR 107 L QD+D NE + +R K P+ A+ + G + + + Sbjct: 196 LTAQDIDWNEQLVRVRG-KGKKERQVPIGEPALTAIRNYWSTLEQSPGGGSPVFLGETEK 254 Query: 108 GSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRH 167 + LS + + ++ AG PH LRH+ + + GAD R +Q+ LGH ++ Sbjct: 255 AAALSPRVLQQRLKKYLALAGLDPSLTPHKLRHSYATHMLDAGADLRSVQELLGHAHLIT 314 Query: 168 TVRYTASNAARFAGLWERNNLIN 190 T YT + R ++ + Sbjct: 315 TQVYTHVSTERLKRAYDSAHPRA 337 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 7/197 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA--TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + L+ +EV A++ A R CLI +AY GMR+SE++ L + + Sbjct: 106 PLPKILSRQEVDALIAAADAKDAHQATRLQCLIEIAYASGMRVSEIVALRLDAVQKDPAY 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRG-SRLSRQQA 116 + ++ K G + PL R A++ + R + A +F SR L+R++ Sbjct: 166 LIVKG-KGGTERLVPLNPSARAAIKDYLDIRPLFLNAKDKANPYLFCSRGAEGHLTRRRV 224 Query: 117 YRIIRDAGIEAGTVT-QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 +++ +A +EAG + PH+LRHA L E GAD R++Q LGH +I T YT Sbjct: 225 GQLLDEAALEAGIDPARVSPHVLRHAFATHLLEGGADLRVVQTLLGHADISTTQVYTHVA 284 Query: 176 AARFAGLWERNNLINEK 192 R + E ++ ++++ Sbjct: 285 TERLKEVVETHHPLSKR 301 >UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CAFB Length = 297 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 2/197 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ +E+ +++++ G R+ ++LL GMRISEL+ L D++ + + Sbjct: 102 KLPKVLSLEEIIKVIKSIDDSNPAGKRNKAMMLLLINTGMRISELVHLEINDINHSVSNV 161 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 ++ K + PL + V + Q ++ +F+ G R++R+ Y I+ Sbjct: 162 SVVG-KGNKERLIPLDEETCSYVYSYMQNDRSFFNKKNNQWLFMMNDGRRMTRENFYNIL 220 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + I AG PHMLRH L E D R IQ LGH++I T YT + Sbjct: 221 QKLVIGAGVRDHFTPHMLRHTFATTLLENHCDLRSIQVMLGHQDISTTTIYTHVTHRQIL 280 Query: 181 GLWERNNLINEKLKREE 197 + + + N + K++E Sbjct: 281 DDYNKYHPGNARRKKDE 297 >UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S5H6_PROA2 Length = 335 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 22/204 (10%) Query: 6 YLTGKEVQAMMQ----------------AVCYGATGARDYCLILLAYRHGMRISELLDLH 49 +L+ +E + + A G T ARD L+ + Y G+RISE++ L Sbjct: 131 FLSERETEKLFDELLSLPAPGEALGAVRAGDGGFTYARDRALLEVLYGCGLRISEVIGLQ 190 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANW-----KGADRTDAIFI 104 Y++++L + + + K G + PL R A+ + + R N+ + + +F+ Sbjct: 191 YENVNLQDSLLRVSG-KGGKQRIVPLGGPARTALRNYFEVRRNFFRMKNEESPDASYVFV 249 Query: 105 SRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRN 164 +++G R+ R+ R + +PH+LRH+ + GAD + + + LGH N Sbjct: 250 TKKGRRIYPVLVQRVTRKYLSAVTEIKYKNPHVLRHSFATHMLNSGADLKSVSEMLGHTN 309 Query: 165 IRHTVRYTASNAARFAGLWERNNL 188 + T YT R ++ + + Sbjct: 310 LTTTEIYTHVTFGRIKEVYLKAHP 333 >UniRef50_B4EUJ8 Fimbriae recombinase n=4 Tax=Proteus RepID=B4EUJ8_PROMH Length = 188 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 89/184 (48%), Positives = 122/184 (66%), Gaps = 1/184 (0%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 M +R++LT EV A+++ G RDYC+ L+ + HG R+SEL +L D+DL + Sbjct: 1 MKQRKFLTRFEVNAILKQAKEGRYPERDYCMFLMCFLHGFRVSELCNLTLSDIDLESRIL 60 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +RRLK G ST P+ +E EA+ W + R NW+ +D ++ +F+S++ +SRQQ Y ++ Sbjct: 61 YVRRLKGGLSTTQPIIDEEYEALCNWLKSRENWRESD-SEWVFLSQKTGPISRQQVYGLL 119 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 R G +A HPHMLRHACGY LA+ G DTRLIQDYLGHRNI HTV YTASN+ RF Sbjct: 120 RRLGKKANVSISPHPHMLRHACGYALADLGRDTRLIQDYLGHRNISHTVIYTASNSKRFI 179 Query: 181 GLWE 184 +WE Sbjct: 180 NMWE 183 >UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepID=D0W8E1_NEILA Length = 334 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 6/194 (3%) Query: 4 RRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L + + M+ G RD+ L L Y G+R+SE+ L+ D+ L+E ++ Sbjct: 145 PKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDVYLDEAWVH 204 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K PL EA++ + R + A A+F R G+RLS++Q + + Sbjct: 205 VTG-KGRKQRQVPLTGKSAEALKNYLPLR---QTASDGKALFTGRNGTRLSQRQIQKRLA 260 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G PHM+RH+ L + D R +Q+ LGH ++ T YT + A Sbjct: 261 QWAAINGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIAR 320 Query: 182 LWERNNLINEKLKR 195 L++ + ++ ++ Sbjct: 321 LYDEAHPRAKRQEK 334 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 3/198 (1%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + ++ +E+ + ++ RD L+ + Y GMR+SEL +L + L+L Sbjct: 135 TLPQFFYEQELTQLFDSLYKREDDAAWRDRMLLEVLYATGMRVSELSELSLERLNLEVQL 194 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 I + K + PL +A+ + + + + ++ +G+ +S +Q Sbjct: 195 IRVLG-KGNKERIVPLGDSATQAIRDYLSHLRPKIDRNNSPYLLLTDKGAPMSPRQIRTR 253 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ E + +PH LRH+ L +GAD R +Q+ LGH N+ T YT + Sbjct: 254 LKSLVEEQAMNLKIYPHKLRHSFATHLLNKGADLRTVQELLGHANLSSTQIYTHVTKDQL 313 Query: 180 AGLWERNNLINEKLKREE 197 + + + ++ K+++ Sbjct: 314 RSQYLKAHPRAKQAKQDK 331 >UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE1_9ACTO Length = 303 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 3/175 (1%) Query: 17 QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLR 76 +A GA+ R++ ++ L Y G+R+SE+ L L+ + + + K V P Sbjct: 131 EAAAGGASQIRNWAILELTYACGLRVSEVCALDISSLNRDALTVRVVG-KGNKERVVPYG 189 Query: 77 FDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHP 135 +A++ W + R G +A+F+ +G R+ + ++ AG P Sbjct: 190 PPAADALDHWLVRGRPQLAGERSGNALFLGDKGGRIDPRIVRSMVHKTAARAGVH-DIAP 248 Query: 136 HMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 H LRH+ L + GAD R +Q+ LGH ++ T RYT + AR + +++R + Sbjct: 249 HGLRHSTATHLLQGGADLRAVQEMLGHSSLSTTQRYTHVDTARLSAIYQRAHPRA 303 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 2/192 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 S R L+ E + RD L+ L Y G+RISE +L D+DL G + Sbjct: 129 STPRPLSP-EASDFDTSAWAVLRSLRDTALLELLYSAGLRISEACNLDRADVDLRGGELR 187 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSRLSRQQAYRII 120 +R K G + PL A+E W Q R K D IF + G RL+ ++ R++ Sbjct: 188 VRHGKGGKQRMVPLGRTAVAAIEAWLQARTRAKPQLDPMGPIFTGQLGKRLNSREGQRLL 247 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 PH LRHA L + GAD R IQ+ +GH ++ T +YT + A Sbjct: 248 EKWRARLDLPESVTPHALRHAFATHLLQAGADLRAIQEMMGHASLSATQKYTHLDMQALA 307 Query: 181 GLWERNNLINEK 192 +++ + ++ Sbjct: 308 KVYDAAHPRAQR 319 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 10/200 (5%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGA-------RDYCLILLAYRHGMRISELLDLHYQDLD 54 +L +V ++ ++ GA A R++ L Y G+R+SEL + D+D Sbjct: 125 KIPSFLGVDDVFHLLDSLNAGAARAGASWRRCRNWALFECMYSTGVRVSELAGMDESDVD 184 Query: 55 LNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRGSRLS 112 +EG + + K + P+ +AV+ + + + R A+F + RG RL+ Sbjct: 185 FHEGMVRVLG-KGSKERIVPVGGKALDAVKLYLRVLDSQFPEARRMGSALFRNARGRRLT 243 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + +R++R G PH LRH L GAD R IQ+ LGH N+ T RYT Sbjct: 244 TRSVHRLLRMELRRCGLWQHLSPHGLRHTFATHLLNSGADLRAIQEMLGHSNLSTTQRYT 303 Query: 173 ASNAARFAGLWERNNLINEK 192 + + +++ + + + Sbjct: 304 HVHVDQLMKVYDAAHPRSRR 323 >UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga RepID=C7M6X5_CAPOD Length = 307 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 3/193 (1%) Query: 7 LTGKEVQAMMQ--AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 + E++ ++ + R+ +I Y G+R SEL L D+D + +I + Sbjct: 115 FSEAEIEKVLSFFSSKDSFDEVRNRAVIETLYATGIRRSELSGLKVSDVDFEQKQIKVLG 174 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K P+ + ++ + R K D +F+ + G ++ YRII Sbjct: 175 -KGDKERYIPIIPELENTLKEYLVLREEVKNEKSQDYLFLVKNGKKIYSTLVYRIINSYF 233 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 T PH+LRH+ L + GAD +++ LGH ++ T YT ++ A ++ Sbjct: 234 SVVTTKKDVSPHVLRHSFASHLLDNGADLYTVKELLGHSSLASTQVYTNTSLAELKKQYK 293 Query: 185 RNNLINEKLKREE 197 + + + EE Sbjct: 294 KAHPRAKGNSNEE 306 >UniRef50_C7NGY7 Site-specific recombinase XerD n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NGY7_KYTSD Length = 336 Score = 203 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 2/173 (1%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 AT RD ++ L Y G+R+ EL+ L + L + + + K V P Sbjct: 165 PVSLATDLRDRAVLELLYATGIRVGELVSLDTGAVSLQDHTVRVWG-KGSKERVVPFGVP 223 Query: 79 EREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHM 137 A+E W Q R GA +A+F+ RG R+ ++ R++ A PH Sbjct: 224 ALRALEEWVHQGRPELLGARSGEALFLGVRGGRIDPREVRRVVHRAAQRVEGAADIGPHG 283 Query: 138 LRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 LRH+ + + GAD R +Q+ LGH ++ T YT + R ++R++ Sbjct: 284 LRHSAATHMVDAGADIRSVQELLGHASLATTQVYTHVSVERLREAFDRSHPRA 336 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 18/204 (8%) Query: 4 RRYLTGKEVQAMMQAVCYGATGAR---------------DYCLILLAYRHGMRISELLDL 48 R L E A++ + G G R D L L Y G+RISE L L Sbjct: 172 PRALNVDETFALLDSA-TGPGGKRGPVAGSAEEERILCRDLALAELLYGSGLRISEALSL 230 Query: 49 HYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRG 108 D+ L+ + + K + PL ++ W +ER D A+F+ RG Sbjct: 231 DVDDVQLSSRVLRVMG-KGSRERLAPLSDTSFSCLKAWLEERPLLALPDEA-ALFVGARG 288 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 +RL+R++A RI+ AG PH LRH+ L E GAD R +Q+ LGH+ + T Sbjct: 289 ARLNRREAARIVERLCRRAGLTFTVSPHSLRHSFATHLLEAGADMRSVQELLGHQRLTTT 348 Query: 169 VRYTASNAARFAGLWERNNLINEK 192 RYT + +++ + + K Sbjct: 349 QRYTQVSLESLMQTYDQAHPRSGK 372 >UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD9_ALIAD Length = 307 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 5/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 RYL +EV A++ V RD L+ Y G+R+SE + L DLDL+ G Sbjct: 109 LPRYLHEEEVAALIDHVGGDDFVALRDRALLEFLYATGVRVSECVHLDIGDLDLSAGFAR 168 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K G + +A+ R+ R R A+FI+RRG RL+ + R++ Sbjct: 169 VLG-KGGRERYVMVGRRAVDALRRYLPLRDRMA---RCSAVFINRRGGRLTDRSVRRVLE 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 E + H H LRH+ + GAD R +Q+ LGH ++ T YT ++ + A Sbjct: 225 RRIQEVPGLRSIHVHGLRHSFATHMLNGGADLRSVQELLGHASLSSTQIYTHTSREQLAR 284 Query: 182 LWERNNLINEK 192 + + + Sbjct: 285 AYYAAHPRARR 295 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 4/172 (2%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ +EV ++ RD ++ L Y G+R+SEL++L+ +++ G I Sbjct: 108 PSILSVEEVTRLLNQPGGRTPKEIRDKAMLELLYATGIRVSELMNLNLHHINMTIGFITC 167 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 G P ++A++ + + R +D +F++ G ++SRQ ++II+ Sbjct: 168 SDS--GRERTIPFGRVAKKALDDYLKNSRPELTKKKESDWLFVNCSGGQMSRQGFWKIIK 225 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 G +AG T PH LRH+ L GAD + +Q LGH ++ T Y A Sbjct: 226 YYGEKAGIQTDITPHTLRHSFAAHLISSGADMKAVQQILGHSDMATTQMYAA 277 >UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FAZ0_SORC5 Length = 358 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 9/199 (4%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDL---NE 57 +L +M+ A G RD ++ Y G+R+SEL L +D + Sbjct: 157 PLPTFLDVDAAAEVMEIPGAETAEGLRDRAMLETLYGAGLRVSELCGLDLTHVDRRPADR 216 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWK----GADRTDAIFISRRGSRLSR 113 + + K + PL A+ER+ + R GA A+F+SRRG+R+ Sbjct: 217 AAVRVVG-KGDKERIVPLGSHALAAIERYLERRDELADPTTGARDPRALFLSRRGARIGV 275 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 ++ +++ G HPH LRH C L + GAD R IQ LGH ++ T RYT Sbjct: 276 RRVQALVQRYGALGAGRADLHPHALRHTCATHLLDGGADLRAIQKLLGHASLATTQRYTH 335 Query: 174 SNAARFAGLWERNNLINEK 192 + +++ + + K Sbjct: 336 VSIDHLLKVYDAAHPMARK 354 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 5/188 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 +L EV ++A R+ LI L Y GMRI E+ +L + +D N Sbjct: 110 KLPEFLYPAEVIEYLRAAADPQNDQYLRNSALIELLYATGMRIFEITNLTFSQIDFNSQI 169 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRGSRLSRQQAY 117 ++I K + P +++++ R K +++ IFI+ RG +L+ A Sbjct: 170 VDITG-KGKKQRIIPFGKPALASLKQYLPWREKTMQKFSEKHSYIFINTRGRQLTETGAE 228 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ + HPHMLRH+ L GAD R +Q+ LGH ++ T YT Sbjct: 229 YILKQVSKRSKLTANIHPHMLRHSFATHLLNNGADIRTVQELLGHASLSTTQIYTHITTE 288 Query: 178 RFAGLWER 185 +++ Sbjct: 289 NLQENYKK 296 >UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN0_9FIRM Length = 300 Score = 202 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 1/191 (0%) Query: 6 YLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRL 65 YL+ EV+ + + + ++++ Y G+R+SEL DL D+ L E + ++ Sbjct: 111 YLSVDEVKKVFSSFQDNEIDQYNKTILVVLYSCGLRVSELCDLKLNDVHLTEQILKVKG- 169 Query: 66 KNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGI 125 K + P+ ++ + F++R G +RQ + +I+ Sbjct: 170 KGDKERIIPISSYCVSQMKYYLDSIRFVWDVKNVSYFFVNRLGHICTRQYVHLMIKQKVN 229 Query: 126 EAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWER 185 E + H RH+ L + AD R++Q+ LGH NI T YT R + +++R Sbjct: 230 ELNLNPKISAHSFRHSFATHLLDGDADLRIVQELLGHSNISTTQIYTHIQDKRLSSVYDR 289 Query: 186 NNLINEKLKRE 196 EK K E Sbjct: 290 CFQKIEKSKEE 300 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 202 bits (514), Expect = 6e-51, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 5/196 (2%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L A++ + ARD + L Y G+R+SE + L+ D+D ++ + Sbjct: 103 LPKALPVDGTAALLDRIEGESELDARDRAIFELVYSCGLRLSETVALNLDDVDFSDSLLR 162 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 IR K G + P+ + + W ER+ A+F+ R G RL +Q + +R Sbjct: 163 IRG-KGGKERLVPIGAEAMLRLRTWLGERS---AGMDEPALFLGRHGHRLGGRQVEKRLR 218 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 D I+ G HPHMLRH+ + + D R +Q+ LGH N+ T YTA + A Sbjct: 219 DWAIKTGAGQHVHPHMLRHSFASHMLQSSGDLRAVQELLGHANLSSTQIYTALDFQHLAK 278 Query: 182 LWERNNLINEKLKREE 197 +++ + K + + Sbjct: 279 VYDGAHPRARKRGKPD 294 >UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510416 Length = 319 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 1/172 (0%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 RD ++ + Y +R+SEL L+ D+D I + K P Sbjct: 149 PIEATKWVRDAAILEMLYATAVRVSELTGLNRGDVDHQRSMITVLG-KGNKERRVPYGKP 207 Query: 79 EREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHML 138 + A+++W R + DA+F+ RG R+ +Q ++ G + PH L Sbjct: 208 AQTALQKWLSLRDTFASESSGDALFLGVRGGRIGARQVRELVHRYGAADPSAPDIGPHGL 267 Query: 139 RHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 RH+ + + GAD R IQ+ LGH + T YT + R + + + Sbjct: 268 RHSAATHMLDGGADLRQIQELLGHSTMSSTQIYTHVSMQRLQETYRQAHPRA 319 >UniRef50_Q2VBV9 HbiF n=29 Tax=Bacteria RepID=Q2VBV9_ECOLX Length = 187 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 96/184 (52%), Positives = 127/184 (69%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 R+YLT EV +M A + R+ CLI++A+ HG R SELLDL D+D + ++NIR Sbjct: 3 RKYLTQDEVYRLMDAAQSMSFPERNRCLIMMAFIHGFRASELLDLRLSDIDASGKQLNIR 62 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 R+KNGFST HPL DE ++ W ++R + D +F+SR+ +SRQ + IIR+A Sbjct: 63 RIKNGFSTTHPLLPDEYNLIKLWLKQRKLIENGVEGDWLFLSRKRRPISRQHFFSIIREA 122 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 G AG + HPHMLRHACG+ LA+ G DTRL+QDYLGHRNI+HTVRYTASNAARF G+W Sbjct: 123 GKRAGLAVKAHPHMLRHACGFALADNGVDTRLLQDYLGHRNIQHTVRYTASNAARFKGVW 182 Query: 184 ERNN 187 ++ Sbjct: 183 KKKP 186 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 7/195 (3%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +T +V ++++ A G RD + Y G RISE+ L + +DL G + Sbjct: 112 LPHTMTDSDVNRLLESCDVSTAAGLRDRAFLEFLYATGARISEVATLRLEQVDLQNGTVR 171 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRT----DAIFISRRGSRLSRQQA 116 + K + PL E ++++ + R D+T A+FIS RG+ +S Sbjct: 172 LFG-KGSKERIVPLYESAIEWLKKYLRSSRPTLLLKDKTGRVHSALFISVRGNNMSADSL 230 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 ++ AG + PH +RH EL GAD R++Q+ LGH ++ T YT + Sbjct: 231 RKVFSSYLTAAGLDSSLSPHAMRHTYATELLGGGADLRIVQELLGHESLSTTQVYTHLSV 290 Query: 177 ARFAGLWERNNLINE 191 R + + ++ Sbjct: 291 DRLKEAAKAAHPRSK 305 >UniRef50_A5FIL1 Phage integrase family protein n=4 Tax=Flavobacteriaceae RepID=A5FIL1_FLAJ1 Length = 297 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 3/187 (1%) Query: 7 LTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 + KEV +M V G RD ++ L Y GMR +EL+ L +++DL+ G + + Sbjct: 112 FSEKEVSDLMFGVESPIGFEEVRDKLIVDLFYTTGMRRAELIGLMLKNVDLSSGVVKVLG 171 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAG 124 K + PL + + + +ER ++ FIS++G +LS YR+I Sbjct: 172 -KRSKERIVPLLPIVADQINLYIKEREQLDQIVDSEYFFISKKGLKLSESFVYRLINCYF 230 Query: 125 IEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWE 184 + PH+LRH L GAD +++ LGH ++ T YT ++ A ++ Sbjct: 231 SRVSEKVKKSPHVLRHTFATHLLNNGADLNSVKELLGHSSLASTQVYTHNSLAELKKVYS 290 Query: 185 RNNLINE 191 + N+ Sbjct: 291 EAHPRNK 297 >UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desulfovibrio RepID=Q311L4_DESDG Length = 332 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 16/206 (7%) Query: 4 RRYLTGKEVQAMMQAVCYGATGA--------------RDYCLILLAYRHGMRISELLDLH 49 R L + A++ A+ A RD L L Y G+RISE L L Sbjct: 124 PRALNVDQAYAVLDTRTQAASRAQVHVRQAHKREQLTRDLALAELLYGSGLRISEALALD 183 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANW-KGADRTDAIFISRRG 108 D + G I + K + PL R+A++ W R A+F+ RG Sbjct: 184 LCHTDPSSGLIKVTG-KGSKERIVPLSDTSRQALQLWLDVRETLDVSGGAEQAVFLGARG 242 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 RL+R+QA RII D AG PH LRH+ L E GAD R +Q+ LGH + T Sbjct: 243 GRLNRRQALRIIEDLCRAAGLPQAVSPHALRHSFATHLLEAGADMRSVQELLGHERLTTT 302 Query: 169 VRYTASNAARFAGLWERNNLINEKLK 194 RYT + +++R + ++ K Sbjct: 303 QRYTHLTLRKIVEVYDRAHPGSKAGK 328 >UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZA8_ACIFD Length = 299 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 4/196 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 ++ R L EV+ ++++V GARD ++ + Y G+R+SEL + +GR Sbjct: 107 VALPRALARDEVERLIESVGTADVAGARDRAILEVLYGSGVRVSELCGFTLDTI--AQGR 164 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K G + P+ R+A+E+W R + A + +F++ RG+ ++RQ + + Sbjct: 165 WVPVVGKRGRERLVPISAPARDALEQWV-VRWRPQLAPKHRMLFVNLRGAPITRQGVWLV 223 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ G + PH+LRH+ + E GAD R++Q+ LGH ++ T YT + Sbjct: 224 LKQRASRVGLGDRVSPHVLRHSLAVHMVEAGADLRVVQEILGHASLATTELYTKVSEGHV 283 Query: 180 AGLWERNNLINEKLKR 195 +++R + R Sbjct: 284 DAVYQRAHPRARAGSR 299 >UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6T2_KANKD Length = 299 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 1/181 (0%) Query: 15 MMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHP 74 + Q RD ++ L Y G+R++EL + DL ++ + + K P Sbjct: 120 LDQMPEDEPIEVRDKAMMELLYSSGIRLAELSAMDIDDLSFSDQSLRVLG-KGNKVREVP 178 Query: 75 LRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTH 134 ++ + W +ER N+ A+F+S++G+RL+ + + + G + G + H Sbjct: 179 FGNSSKKVLSLWLKERNNFAKNSDEKALFLSQQGNRLTNRAIQQRLAHWGKKLGLNDRLH 238 Query: 135 PHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKLK 194 PH LRH+C + E +D R +Q+ LGH +I T YT + A ++ + K K Sbjct: 239 PHKLRHSCATHVLESSSDLRAVQELLGHASISTTQIYTHLDFQHLAKTYDAAHPRARKKK 298 Query: 195 R 195 Sbjct: 299 E 299 >UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia RepID=B1ZW75_OPITP Length = 324 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 11/196 (5%) Query: 3 KRRYLTGKEVQAMMQAVC--------YGATGARDYCLILLAYRHGMRISELLDLHYQDLD 54 ++LT +++ ++ T RD ++ L Y G+R+SEL L+Y +D Sbjct: 132 LPKFLTEEQMVRLLAGPQQLLASESIDAFTAHRDRLVLELLYGAGLRVSELTGLNYGAID 191 Query: 55 LNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQ 114 L G I K + P+ + ++ E A D + +++RG+R+S + Sbjct: 192 LEAGVARIVG-KGRKERLCPIGRVAVAVLRKFRDEFAPATAPDA--PVIVTQRGTRMSPR 248 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 + +++ A PH LRH+ L GAD RL+Q+ LGH + T YT Sbjct: 249 EVQLMLKRYLALAELPMDLTPHKLRHSYATHLLNAGADLRLVQELLGHAQLATTQVYTHV 308 Query: 175 NAARFAGLWERNNLIN 190 + AR ++ + + Sbjct: 309 SVARLKEIYAKAHPRA 324 >UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae RepID=XERC_NEIMF Length = 305 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 6/191 (3%) Query: 4 RRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L + + M+ G RD+ L L Y G+R+SE+ L+ D+ L+E ++ Sbjct: 116 PKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDVYLDEAWVH 175 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K PL EA++ + R + A A+F R G+RLS++Q + + Sbjct: 176 VTG-KGRKQRQVPLTGKSVEALKNYLPLR---QTASDGKALFTGRNGTRLSQRQIQKRLA 231 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G PHM+RH+ L + D R +Q+ LGH ++ T YT + A Sbjct: 232 QWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIAR 291 Query: 182 LWERNNLINEK 192 L++ + ++ Sbjct: 292 LYDEAHPRAKR 302 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 12/199 (6%) Query: 2 SKRRYLTGKEVQAMM-----QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + R L + ++ A RD ++ Y G+R+SEL L+ DLD Sbjct: 131 TLPRVLAADQTAEILHNLEVGAEEEDPIALRDLAMVEFMYGTGVRVSELCRLNIGDLDFA 190 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERA-----NWKGADRTDAIFISRRGSRL 111 + I K V P A++RW N D +A+F+ +RG R+ Sbjct: 191 RQTVTILG-KGNKQRVVPFGESAAHALKRWIDIGRPAIAANGHHKDADEAVFLGKRGGRI 249 Query: 112 SRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 +Q ++ A PH LRH+ ++ E GAD R++Q+ LGH ++ T Y Sbjct: 250 DPRQVRTVVHQATSTVSGG-DVSPHALRHSAATDVLEGGADLRVVQEMLGHASLATTQIY 308 Query: 172 TASNAARFAGLWERNNLIN 190 T ++ R ++ + + Sbjct: 309 THVDSERLKAVFNQAHPRA 327 >UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Proteobacteria RepID=Q1LSD3_RALME Length = 369 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 17/210 (8%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHY---QD----- 52 + L+ + A++ RD + L Y G+R+SEL+ L +D Sbjct: 134 PLPKALSVEHAVALVAHRQDDTNESLRDQAVFELFYSSGLRLSELIQLDVRYTEDGDYRS 193 Query: 53 ---LDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA----DRTDAIFIS 105 LDL+ + + K P+ +A++ W R + A+F+ Sbjct: 194 SGWLDLDGAEVTVLG-KGSRRRTVPVGSKAIQALKAWIHVREMMLRPGALPEDAHALFLG 252 Query: 106 RRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNI 165 RG RL + I+ + AG + HPHMLRH+ + + D R +Q+ LGH +I Sbjct: 253 TRGRRLPISTVQQRIKRQALAAGVPSDVHPHMLRHSFATHMLQSSGDLRAVQEMLGHASI 312 Query: 166 RHTVRYTASNAARFAGLWERNNLINEKLKR 195 T YT+ + A ++++ + + + Sbjct: 313 STTQIYTSLDFQHLAKVYDQAHPRAGRASK 342 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 7/195 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-----ATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + L + + ++A G RD ++ + Y G+R+SEL L D+D + Sbjct: 107 TLPSVLRQDQARDALEAAESGAQQGDPLAVRDRLVVEMLYATGIRVSELCGLDVDDVDTS 166 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQ 115 + + K P A+ W E R AD A+ + RG RL +Q Sbjct: 167 RRLLRVLG-KGNKQRTVPYGEPAHAALTAWLHEGRPALATADSGPALLLGARGKRLDPRQ 225 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A ++ G PH LRH+ L E GAD R++Q+ LGH ++ T YT Sbjct: 226 ARTVVHQTVSAVGGAPDIGPHGLRHSAATHLLEGGADLRVVQELLGHSSLATTQLYTHVT 285 Query: 176 AARFAGLWERNNLIN 190 AR + ++ + Sbjct: 286 VARLRAVHDQAHPRA 300 >UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium RepID=Q6A7J6_PROAC Length = 315 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 1/171 (0%) Query: 20 CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDE 79 GARD ++ + Y G+R+ EL L D+D + + + K P+ Sbjct: 146 DESPHGARDAAILEVLYGGGLRVGELCGLDLGDVDRSRRTVKVTG-KGDKERTVPMGAPA 204 Query: 80 REAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLR 139 A++ W R W G A+F+ RG R+ ++ R++ PH LR Sbjct: 205 LRAIDTWLPRREEWVGPHSGQALFLGARGRRIDQRVVRRVVHTDLRAEPDSPDLGPHGLR 264 Query: 140 HACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 HA L E GAD R +QD LGH ++ T YT + R + + + Sbjct: 265 HAMATHLLEGGADLRTVQDILGHESLATTQIYTHVSTERLRTAFRQAHPRA 315 >UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8T8_9ACTN Length = 308 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 8/194 (4%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT +E+ A+ A G RD ++ L G RISEL L D+ + E ++ Sbjct: 115 LPHVLTAEELAALFDAPDLSCPVGLRDAAMLELFIATGARISELSRLELGDVCVAERQVC 174 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ------ERANWKGADRTDAIFISRRGSRLSRQQ 115 + K + PL E ER+ + RA G D A+F+S RG ++ Sbjct: 175 LLG-KGSKERIVPLYARAIEVYERYLENGRPNLLRAPALGGDACRAVFVSDRGRAMNSDA 233 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 +AG + PH +RH EL GAD R +Q+ LGH ++ T YT Sbjct: 234 LRYRFDVLKRKAGISSDITPHAMRHTFATELLGGGADLRSVQELLGHASLSTTQIYTHLT 293 Query: 176 AARFAGLWERNNLI 189 R R + Sbjct: 294 PDRLKSAVARAHPR 307 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQA-MMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L +E++ ++ RD +I L Y GMR+SE L D + Sbjct: 111 LPTFLYEEEMEHWLLALPANKPLEKRDKAIIELLYATGMRVSECSMLALDQWDRVSETVR 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRGSRLSRQQAYRI 119 + K P+ AVE + E + D T +F++ RG LS + +I Sbjct: 171 VFG-KGRKERYVPVGKMAVSAVESYIHEARPKLLRANDPTSHLFLNYRGGALSDRSIRKI 229 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + EA + PH +RH+ L GAD R +Q+ LGH++++ T YT + R Sbjct: 230 VEKRLDEAAMQKKISPHAIRHSFATHLLNAGADLRAVQELLGHQSLKTTQVYTHVSKERL 289 Query: 180 AGLWERNNLIN 190 +++ + Sbjct: 290 YAVYKGAHPRA 300 >UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD8_WEIPA Length = 308 Score = 200 bits (509), Expect = 2e-50, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 6/186 (3%) Query: 3 KRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 RY KE+ M V A G R++ L+ + Y G R+SE+ ++ Q++D + + Sbjct: 115 LPRYFYQKELTKMFDVVMTDQSALGLRNHLLLEMLYGTGARVSEIANMTLQNVDSHARVV 174 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANW--KGADRTDAIFISRRGSRLSRQQAY 117 I K + + P +A+ ++ + R K AD ++ +F+++RG+ ++ Sbjct: 175 TITG-KGNKTRIVPFGRYAADALAKYLKTGRPVLASKQADTSNKLFLNQRGAPVTTAGIE 233 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ G ++G + HM RH +L AD R +Q LGH ++ T YT Sbjct: 234 YILKQIGKKSGLTQEVTAHMFRHTFATDLLNNQADLRTVQQLLGHSSLSTTQIYTHVTTD 293 Query: 178 RFAGLW 183 + Sbjct: 294 ALQKSY 299 >UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W041_9ACTO Length = 302 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 8/194 (4%) Query: 3 KRRYLTGKEVQAMMQ-----AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 + L+ +++ + A RD+ L Y G+R++EL+ L+ +D + Sbjct: 111 LPQVLSLEQINQLFNHLVETAQTGNVNAIRDWATSELLYSCGIRVAELVGLNLTSVDGSN 170 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQA 116 + + K + P E++ W Q R A+F+ RG R+ ++ Sbjct: 171 RTLRVIG-KGNKERLVPFGTPALESLRAWVTQGRPQLVNERSGQALFLGSRGGRIDQRIV 229 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 + A ++AG PH LRH + E GAD R +QD LGH ++ T RYT +A Sbjct: 230 RECLEKACVQAGVPV-LSPHGLRHCAATHMLEGGADLRTVQDMLGHASLATTQRYTHVDA 288 Query: 177 ARFAGLWERNNLIN 190 R + + + + Sbjct: 289 VRLSNIMRQAHPRA 302 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 8/196 (4%) Query: 3 KRRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + ++ +E+ AM++ G G RD LI L Y G RI+E+++L DL L Sbjct: 120 LPKAISLEEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPDDLYLAGEFP 179 Query: 61 NIRR-LKNGFSTVHPLRFDEREAVERWTQERANWKGADRT-----DAIFISRRGSRLSRQ 114 +++ K + PL +A+E + +F+++RG LSRQ Sbjct: 180 HVKLFGKGRKERLVPLGSFAVQALEDYLLLGRPLLLGKAKTRVAGHPLFLNKRGLSLSRQ 239 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 A+ II + AG V++ PH LRH+ L E GA R +Q+ LGH ++ T YT Sbjct: 240 SAWEIISQTAVAAGCVSEVSPHSLRHSFATHLLEGGASIRDVQELLGHASVTTTQIYTKV 299 Query: 175 NAARFAGLWERNNLIN 190 + + + Sbjct: 300 SMNTLREVHALTHPRA 315 >UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium RepID=XERC_MYCSK Length = 300 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 7/195 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-----ATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + L + + + A G RD ++ + Y G+R+SEL L D+D + Sbjct: 107 TLPAVLRQDQARDALDAANSGAQQGDPLALRDRLIVEMLYATGIRVSELCGLDIDDVDTS 166 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQ 115 + + K P +A+ W R A+ A+ + RG RL +Q Sbjct: 167 RRLLRVLG-KGDKQRTVPFGEPAEQALRAWLTSGRPALATAESGPALLLGARGRRLDPRQ 225 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A ++ + PH LRH+ L E GAD R++Q+ LGH + T YT Sbjct: 226 ARTVVHETVGAVAGAPDIGPHGLRHSAATHLLEGGADLRIVQELLGHSTLATTQLYTHVT 285 Query: 176 AARFAGLWERNNLIN 190 AR + ++ + Sbjct: 286 VARLRAVHDQAHPRA 300 >UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTG9_9BACT Length = 318 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 14/200 (7%) Query: 2 SKRRYLTGKEVQAMMQAVC----------YGATGARDYCLILLAYRHGMRISELLDLHYQ 51 S L+ +++ ++ + +RD ++ + Y G+RI E LD+++ Sbjct: 116 SLPLILSREDISTLLSSPAPYWAQKKGKNNDFMASRDAAILEIIYSGGLRIQEALDINFD 175 Query: 52 DLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRG- 108 ++L E + I K L ++A+E++ R N D +FI+ + Sbjct: 176 QINLEESTLKIFG-KGKKQRTAYLGNPAKQALEQYFACRKNAELNWTSANDPVFINLKDL 234 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 RLS + R ++ PH LRH+ L + GAD R +Q+ LGH N+ T Sbjct: 235 KRLSARSIQRNLKAYLQSCQLPPDITPHKLRHSFATHLLDAGADLRSVQELLGHENLSTT 294 Query: 169 VRYTASNAARFAGLWERNNL 188 YT + R +++ + Sbjct: 295 QIYTHISTDRLLQAYDQAHP 314 >UniRef50_P0ADH6 Type 1 fimbriae regulatory protein fimB n=142 Tax=Bacteria RepID=FIMB_ECO57 Length = 200 Score = 199 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 96/186 (51%), Positives = 124/186 (66%), Gaps = 1/186 (0%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 KR +LT E++++++A G AR+YCL LL + HG R SE+ L D+DL I Sbjct: 8 KKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIY 67 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I RLK GFST HPL E +A++ W R ++ A ++ +F+SR+G+ LSRQQ Y II Sbjct: 68 IHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA-ESEWVFLSRKGNPLSRQQFYHIIS 126 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +G AG + HPHMLRH+CG+ LA G DTRLIQDYLGHRNIRHTV YTASNA RF G Sbjct: 127 TSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYG 186 Query: 182 LWERNN 187 +W+R Sbjct: 187 IWDRAR 192 >UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEBB Length = 304 Score = 199 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 11/191 (5%) Query: 3 KRRYLTGKEVQAMMQAVC--YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ ++V+ ++ V A ARD ++ L Y GMR+ EL D++ + I Sbjct: 122 LPEVLSPEKVEEAIEKVSSEDSAVAARDLAIVELLYATGMRVEELCKADVSDVNFSRHII 181 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD-AIFISRRGSRLSRQQAYRI 119 ++ K + P A++ W Q R N+ + + + A+F+ RG RL+ +QA R+ Sbjct: 182 SVVG-KGDKQRIVPFGAPAEAALKGWLQVRGNFPASAQAEHALFLGVRGGRLNPRQARRV 240 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I PH LRH+ + E GAD R++Q+ LGH ++ T YT +A R Sbjct: 241 IHKWA-------DVSPHALRHSAATAMVEGGADLRVVQEMLGHSSLATTQIYTHVSADRL 293 Query: 180 AGLWERNNLIN 190 + +R + Sbjct: 294 REVHKRAHPRA 304 >UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteriaceae RepID=XERC_BIFLI Length = 355 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 10/180 (5%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 A R+ ++ L Y G+R++EL+ + D+D + I + K V P Sbjct: 178 ARVTAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTG-KGNKQRVVPFGLP 236 Query: 79 EREAVERWTQERANWKGADRTDA--------IFISRRGSRLSRQQAYRIIRDAGIEAGTV 130 + A+E W ++ TDA +F+ RG R+ ++ A I+ A EAG Sbjct: 237 AQRALETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAGVP 296 Query: 131 TQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 PH LRH+ + + GAD R +Q+ LGH +++ T RYT + + + + Sbjct: 297 -DISPHALRHSAATHILDGGADLREVQEMLGHSSLKTTQRYTHVSIEQLKNRYGQAFPRA 355 >UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0D4_HALNC Length = 329 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 2/182 (1%) Query: 10 KEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNG 68 + + ++ RD C+ L Y G+R++EL+ L D+D +EG + K Sbjct: 126 ETMNQLLDQPMVEDELLIRDRCMFELIYSSGLRVAELVRLDVHDIDRSEGIARVTG-KRE 184 Query: 69 FSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAG 128 + + P+ + V W R A+F++RRG RL+ + + + Sbjct: 185 KTRLVPVGGKALDRVALWLPIRKTLLKDTTEPALFLNRRGQRLTIRSVQMRLNRLAQQTH 244 Query: 129 TVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNL 188 HPH LRHA + E D R +Q+ LGH ++ T YT + R A ++E + Sbjct: 245 LGQTLHPHQLRHAFATHVLESSGDLRAVQEMLGHESLSTTQIYTHLDFQRLAQVYESAHP 304 Query: 189 IN 190 Sbjct: 305 RA 306 >UniRef50_Q72AD1 Site-specific recombinase, phage integrase family n=5 Tax=Bacteria RepID=Q72AD1_DESVH Length = 474 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 2/164 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD L L Y G+RISE L L D D + G + + K + PL +A+ W Sbjct: 261 RDLALAELLYGSGLRISEALGLDVLDADPSAGVVRVLG-KGSKERMSPLSDTSVDALREW 319 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 R + ++ A+F+ RG RL R+QA RII AG PH LRH+ L Sbjct: 320 LHFRHHL-ASEGERALFVGARGDRLDRRQATRIIDALCRRAGLPQSVSPHGLRHSFATHL 378 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 E GAD R +Q+ LGH + T RYT A ++++ + Sbjct: 379 LEAGADLRSVQELLGHARLATTQRYTHLTLAHLIEVYDKAHPRA 422 >UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IL8_THICR Length = 317 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 4/192 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQD-LD-LNEGRI 60 + L + +++ RD + + Y G+R+SEL++L LD L G + Sbjct: 126 LPKSLDVDLTRQLLEQPLKTWQDVRDQAIFEILYSGGLRVSELVELDLSPGLDGLASGWV 185 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K P+ ++A+ RW + R+++ A+F++R G RL + + Sbjct: 186 RVLG-KGQKERDAPVGQPAQKALHRWLEIRSDY-AQPGEQAVFVNRFGKRLGVRSIQTQL 243 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++AG T+ PH LRHAC + E D R +Q+ LGH N+ T YT + A Sbjct: 244 DKRTLQAGLPTKMSPHRLRHACATHVLESSGDLRAVQEMLGHANLSTTQIYTKLDLQHLA 303 Query: 181 GLWERNNLINEK 192 ++++ + +K Sbjct: 304 TVYDKAHPRAKK 315 >UniRef50_A8GFT2 Integrase family protein n=3 Tax=Serratia proteamaculans 568 RepID=A8GFT2_SERP5 Length = 198 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 90/181 (49%), Positives = 123/181 (67%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 R++LT EV ++Q G RD CLI + + HG R+SEL L DLD+ G + + Sbjct: 8 RKHLTRTEVTRLLQQAAAGRAPERDSCLIWMGFIHGCRVSELNGLRMADLDMESGCVYMN 67 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 RLKNG ST+HPL E+ + RW ++R + + + + +F+S++G RLSRQ+ YR+++ Sbjct: 68 RLKNGLSTIHPLETTEKNLLTRWLEKRRSCRNLEDEEWLFLSQKGYRLSRQRIYRMLQAY 127 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 G +AG HPHMLRHACGY LA+ GADTR+IQDYLGHRNI+HTV YTA+NA RF LW Sbjct: 128 GKQAGLDVDAHPHMLRHACGYALADNGADTRVIQDYLGHRNIQHTVLYTAANAGRFKHLW 187 Query: 184 E 184 + Sbjct: 188 K 188 >UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECJ8_9ACTN Length = 220 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 10/198 (5%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT ++V+A+++ G RD ++ L Y G RISEL L+ + + +E + Sbjct: 24 LPGVLTTQQVEALLKTPDTSTPAGLRDAAMLELLYASGARISELAALNVESIGWSERTLR 83 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADR-------TDAIFISRRGSRLSR 113 + K + PL EA + +E R + + IS RG+R+S Sbjct: 84 LWG-KGSKERIVPLYRRALEATRLYIEEGRPELLAQAKRRDPATGPHPLLISARGNRMSA 142 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 R AG PH +RH +L E GAD R +Q+ LGH ++ T YT Sbjct: 143 AMLRRRFHTLATLAGIPADIAPHAMRHTFATDLLEGGADLRSVQELLGHASLSTTQIYTH 202 Query: 174 SNAARFAGLWERNNLINE 191 R + + E Sbjct: 203 LTPDRLKRAVAQAHPRGE 220 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 1/176 (0%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN-EGRINI 62 Y++ +EVQ +++A G R+ ++ L Y G+R+SE+ L +D+ L + + + Sbjct: 114 PEYISYEEVQKILEAFPETHLGKRNRAIVALMYYCGLRVSEVCSLTLRDISLESDPLVRV 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 + K + PL D + + + R + A+R +F+ RG ++R+ +++++ Sbjct: 174 KSGKGDKDRIVPLTPDAVRIISDYLKHRDRFPDANRHIKLFVGIRGEPITRKSVNKMLQN 233 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 + HPH+ RH+C L +RGA +++Q+ LGH NI T Y Sbjct: 234 HVKKIFPDKHLHPHIFRHSCATHLLQRGASIKIVQEILGHANISTTSIYLHITDRE 289 >UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncultured alpha proteobacterium EBAC2C11 RepID=Q5UF10_9PROT Length = 315 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 7/201 (3%) Query: 1 MSKRRYLTGKEVQAMMQAVCY---GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 MS + L+ E+ +++ + R ++ + Y G+R+SEL+ L N Sbjct: 117 MSAPKSLSEVEIIQLLKMAKTLEPESASLRALAMLEILYATGLRVSELVSLLVVQFRRNP 176 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 I ++ K G + PL R A RW + R + ++D +F R G +SR Q Sbjct: 177 QTILVKG-KGGRERLVPLGETARLAAVRWIECRDSNPAFVQSDYMFPVRGGGPMSRHQLA 235 Query: 118 RIIRDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 R+++ + A V + PH LRH+ + RGAD R +Q LGH +I T YT+S Sbjct: 236 RLLKKLAVAADIEVGRVSPHKLRHSFATHMLNRGADLRSLQSLLGHADISTTQIYTSSRP 295 Query: 177 ARFAGLWERNNLINEKLKREE 197 R AGL + + +R++ Sbjct: 296 ERLAGLVTSAHPLA--SQRQD 314 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ E+ ++ + D ++ LAY G+R++EL ++ + L L G IN Sbjct: 118 LPKALSDLEITQLLTLEIPETPRTLGDQAVLELAYASGLRLAELRNIRMEQLHLEVGFIN 177 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K V P+ +A++R+ + R +F++ RG+ + ++ I Sbjct: 178 VIG-KGNKERVVPVGSKAVQALQRYLESGRPKLVTPRSPANVFLTMRGTPFAAVTLWKRI 236 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +D +G PHMLRH+ L E GAD R+IQ+ LGH NI T YT + +R Sbjct: 237 KDRVKRSGVARNVTPHMLRHSFATHLLEHGADLRVIQELLGHANISTTEIYTHVSGSRLR 296 Query: 181 GLWERNNLI 189 + + + Sbjct: 297 EVHRKFHPR 305 >UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=C0AAZ7_9BACT Length = 329 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 12/197 (6%) Query: 3 KRRYLTGKEVQAMMQ---------AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDL 53 ++LT ++++ ++ A T RD + L Y G+R+SEL L Y + Sbjct: 136 LPKFLTEQQMKLLLSGPQRLLDNVADITPFTAWRDRLAMELLYGGGLRVSELTALDYGQI 195 Query: 54 DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 D G + K + PL + +W E A + + ++ R+ Sbjct: 196 DFTSGVARVLG-KGRKERLCPLGKVALAVLVKWKNEYA--RDTSPAAPVLVTPEHERMPV 252 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 +Q +++ AG T PH LRH+ L GAD RL+Q+ LGH ++ T YT Sbjct: 253 RQVQLMLKRYLALAGLPTDLSPHKLRHSYATHLLNAGADLRLVQELLGHASLNTTQIYTH 312 Query: 174 SNAARFAGLWERNNLIN 190 + AR ++++ + Sbjct: 313 VSIARLRDIYDKAHPRA 329 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 5/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S + L+ EV+ +++A + G RD ++ Y G+R+SEL + +DL G + Sbjct: 110 SLPKILSQDEVERLIEAPDPHRPEGVRDRAILSFFYASGLRVSELATITADRVDLATGAL 169 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + L R + + R + A +F++R G+ L+RQ + + Sbjct: 170 RVMG-KGAKERIAFLDERTRHLLSDYLTTVRPAF--AREHPELFLARDGAPLTRQALWTL 226 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G AG + PH+LRH+ L E+G D R IQ LGH +IR T YT + A Sbjct: 227 IKKHGRAAGITSPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYTHVSLAHL 286 Query: 180 AGLWERNNLINE 191 + ++ + Sbjct: 287 ENTLKLHHPRGQ 298 >UniRef50_Q8XTL6 Tyrosine recombinase xerC 2 n=1 Tax=Ralstonia solanacearum RepID=XERC2_RALSO Length = 347 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 3/197 (1%) Query: 3 KRRYLTGKEVQAMM-QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 R L+ +EV+A++ +A G RD ++ L Y G+R E+ L D+D Sbjct: 131 PRAILSVQEVEAILAEADPATPYGLRDRAMLELLYSTGIRRMEVAGLALYDVDATRRLAF 190 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 +R K V P+ ++R+ E +A+F++ G +S + ++ Sbjct: 191 VRDGKGAKDRVVPVGVRALAWLDRYLLEARPQLIVAEREALFVTDYGEPVSPEYVASRVK 250 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 AG H+LRHA + E GAD R++Q LGH + T YT + Sbjct: 251 RYMEFAGIQKPGATHLLRHAMATHMLEAGADVRVLQALLGHAQLNTTEIYTHVSIEHLRA 310 Query: 182 LWERNNLINEKLKREEV 198 + + + +L+RE+V Sbjct: 311 IHDATHP--ARLQREDV 325 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 6/185 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + LT V ++ A AR+ CL+ LAY G+R++EL+ L + DLD E I + Sbjct: 132 LPQALTQDAVNRLISAAGTIEPAARNRCLLELAYSAGLRVAELVSLKWSDLDETERWITV 191 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P A+ W + +F + G L+ + +R++ Sbjct: 192 MG-KGSKERMVPYGQWAASALAEWKAQCP----PSEKGWVFPGKGGKSLTERTVHRLVEA 246 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 A AGT PH LRH + E GA + +Q+ LGH ++ T RY + R Sbjct: 247 ASQLAGTPG-ASPHTLRHCFATHMLEGGASVKAVQELLGHESLLTTQRYLRISPERLRRS 305 Query: 183 WERNN 187 ++ N Sbjct: 306 YDDVN 310 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + EV +++++ G R+ ++ L Y GMR+SEL DL + LDL G I Sbjct: 105 KLPEFFYQDEVGQVIRSLNDGKPLTVRNRAIVALFYATGMRLSELTDLKIKQLDLENGMI 164 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRGSRLSRQQAYR 118 + K + ++ +E + Q K T A+F+++ G +S + + Sbjct: 165 LVHG-KGNKDRYVFFDQESKKYLEEYLQAARPSLLKNEPDTGAVFLNKLGRPISSRGIAK 223 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 ++ +AG HPH LRH+ + GAD R +Q+ LGH ++ T YT + Sbjct: 224 AVQQIFQKAGLTAGAHPHELRHSFATAMLNNGADLRSVQELLGHEDLSTTQIYTHVSMQH 283 Query: 179 FAGLWERNNLI 189 + ++ Sbjct: 284 LTVEYRQHFPR 294 >UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD6_THEPD Length = 295 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 RYL +EV M+ A A RD ++LL + G+R+SEL+ L D+DL + + + Sbjct: 110 LPRYLEAEEVFRMVNA----AENLRDKLIVLLLFTTGLRVSELVSLRVSDVDLEKRTLRV 165 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R K + + + + + ++ +F S + R+++ Sbjct: 166 RG-KGSKERLVYFPDYVADLLRSYMK-------GLNSEWLFPSETAEHIHYTTVERVLKR 217 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +AG + PH LRH+ G D R IQ+ LGH N+ T Y + R Sbjct: 218 LKEKAGIEKKVTPHTLRHSFATLSLAAGLDIREIQELLGHSNLNTTQVYAHVSRERLKRD 277 Query: 183 WER--NNLINEKLKREE 197 +ER ++L++ + +E+ Sbjct: 278 YERVWSSLLDPRSAKEQ 294 >UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase family n=2 Tax=Methanobrevibacter smithii RepID=A5UKA5_METS3 Length = 302 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 92/179 (51%), Gaps = 16/179 (8%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA---------TGARDYCLILLAYRHGMRISELLDLHYQD 52 S +LT KEV+ ++ ++ + T RD ++ L Y G+R+SEL++L + Sbjct: 125 SPPNFLTQKEVKQLLDSITWDENSDSDFRIITKLRDKLIVTLLYSSGLRVSELINLSVDN 184 Query: 53 LDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLS 112 ++ +++I S V L ++ ++++ ++R +++ + +++ G+ L+ Sbjct: 185 VNFEGKQLSIVGK--NNSRVILLDESTKQLIQKYLEKRTQ-----KSNYLVVNKSGNPLT 237 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + +I+ G E+G + PH+LRH+ L E+G + ++IQ LGH N+ T Y Sbjct: 238 PRYVQLMIKKYGNESGIEKKITPHILRHSYATHLFEQGVNIKIIQQLLGHSNLSTTQIY 296 >UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4E0_ACIC5 Length = 310 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 8/196 (4%) Query: 3 KRRYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 R T +++ ++ A ARD ++ L Y G+R +EL+ ++ +D+ I Sbjct: 116 LPRVPTIEDMNRLVDASSEEVAAWPARDRLILELLYGCGIRNAELVGINLEDIQWTNEAI 175 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG--ADRTDAIFISRR---GSRLSRQQ 115 +R K P+ +A+ + ER + A+ ++ R RL+ + Sbjct: 176 LVRG-KGRKERYVPIGDAAAQALRAYLPERNQKLATAGKDSAALLLNARLRGQGRLTTRS 234 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 RI++ + G HPH LRHA G L E GAD R IQ+ LGH + T RYT Sbjct: 235 VGRIVKQMALAQGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLSTTQRYTQLT 294 Query: 176 AARFAGLWERNNLINE 191 + +++R + + Sbjct: 295 VGQVEAVYDRTHPRAK 310 >UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMN9_ACIBL Length = 300 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 6/195 (3%) Query: 2 SKRRYLTGKEVQAMMQA--VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 R T +E+ +M A + RD + L Y G+R SEL ++ D+ + Sbjct: 107 KLPRVPTMEELNTVMDAEMPEAASFPERDALIFELLYGCGIRNSELTGINLDDIRWSNEA 166 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG--ADRTDAIFISRRG-SRLSRQQA 116 I IR K P A + + ++R + T+A+ I+ R RL+ + Sbjct: 167 ILIRG-KGKKERFVPFGDAAAVAAKVYLKKRQDILAERHKSTNALLINLRDVQRLTSRSV 225 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 RI++ + G HPH LRHA G L E GAD R IQ+ LGH + T RYT + Sbjct: 226 GRIVKKIAVARGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLATTQRYTQLST 285 Query: 177 ARFAGLWERNNLINE 191 ++++ + + Sbjct: 286 RHVLEVYDKTHPRAK 300 >UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae RepID=XERC_CHLP8 Length = 336 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 23/207 (11%) Query: 4 RRYLTGKEVQAMMQAVCYGATGA-----------------RDYCLILLAYRHGMRISELL 46 R+++ +E + + + A RD ++ + Y G+R+SEL+ Sbjct: 129 PRFVSEEEARQLFRRFESQEDNAALQGDGKKAEVRQFETFRDRAVLEVLYGCGLRLSELI 188 Query: 47 DLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANW-----KGADRTDA 101 L D+DL G + + K + PL EA+ ++ + R N+ + + Sbjct: 189 ALERADVDLVHGFLKVTG-KGRKQRIVPLGEPAVEALRKYFEVRRNFFRIPLERTGESSR 247 Query: 102 IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLG 161 +F++ RG +L R+ + + +PH+LRH+ + GAD + + + LG Sbjct: 248 VFVTSRGRQLYPMLVQRMTKRYLTPVSESEKKNPHILRHSFATHMLNGGADLKSVSEMLG 307 Query: 162 HRNIRHTVRYTASNAARFAGLWERNNL 188 H ++ T YT +R ++++ + Sbjct: 308 HSSLTTTELYTHVTFSRLKEIYDKAHP 334 >UniRef50_C8N6J9 Tyrosine recombinase XerC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6J9_9GAMM Length = 301 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 2/192 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGA-RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 LT +++ +++A RD+ ++ L Y G+R++EL L +DL + Sbjct: 104 PLPDALTPEQITTLLEAPATDNPNLIRDHTILELFYSAGLRLAELASLDNRDLGPDSEH- 162 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +I R K G + + REA+ RW R A+F+++ G RL+ + + Sbjct: 163 HIIRGKGGVERLIFIGSKAREALARWQTVRGQLLKKADEPALFLNKNGGRLTERGIALRL 222 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + E HPHMLRH + + D R +Q+ LGH+N+ T YT + A Sbjct: 223 KAYAAERLPGVNVHPHMLRHTFASHILQSSGDLRSVQELLGHKNLATTQIYTHLDYQHLA 282 Query: 181 GLWERNNLINEK 192 ++ + +K Sbjct: 283 RTYDEKHPRAKK 294 >UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria (class) RepID=A0QJ30_MYCA1 Length = 301 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 2/170 (1%) Query: 22 GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDERE 81 RD ++ + Y G+R+SEL L D+D + + K P E Sbjct: 133 DPIALRDRLIVEMLYATGIRVSELCGLDIDDVDTGRRLVRVLG-KGNKQRSVPFGAPAGE 191 Query: 82 AVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRH 140 A+ W + R A+ A+ + RG RL +QA ++ PH LRH Sbjct: 192 ALHAWLADGRPALANAESGPALLLGARGRRLDVRQARTVVHQTIAAVSGAPDMGPHGLRH 251 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 + L E GAD R++Q+ LGH ++ T YT +R + ++ + Sbjct: 252 SAATHLLEGGADLRVVQELLGHSSLATTQLYTHVAVSRLRAVHDQAHPRA 301 >UniRef50_B8DL21 Integrase family protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL21_DESVM Length = 371 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Query: 36 YRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG 95 Y G+R+SE L+L+ D D G + + K G + PL R+A+ W R Sbjct: 181 YGSGLRVSEALELNVLDADPASGVVRVMG-KGGRERMSPLSDTARDALSAWLAVRHQVDE 239 Query: 96 ADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRL 155 A+F+ RG RL+R+QA RII + AG PH LRH+ L E GAD R Sbjct: 240 GRGEPALFLGARGGRLNRRQAARIIETLCLRAGLPQAISPHGLRHSFATHLLEAGADLRS 299 Query: 156 IQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINE 191 +Q+ LGH + T RYT +R +++R + ++ Sbjct: 300 VQELLGHARLSTTQRYTHLTLSRLVDVYDRAHPRSD 335 >UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB85_BRAFD Length = 332 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 7/178 (3%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 A RD ++ L Y G+R+SEL+ L +D G + +R K + P+ Sbjct: 156 PRDRAVLLRDAAVLELLYSSGLRVSELVALDRSRIDRQHGTVRVRG-KGDRERIVPVGLP 214 Query: 79 EREAVERWTQERANW------KGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQ 132 EA++RW E G DA+F+ RG RL + ++ EAG Sbjct: 215 ALEALQRWESEGRPVLLAAATPGTPPGDALFLGVRGGRLGDRAVRTLVDRHVAEAGISRH 274 Query: 133 THPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 PH LRH+ L E GAD R +QD+LGH ++ T YT +A R ++ + Sbjct: 275 VTPHTLRHSAATHLVEGGADLRSVQDFLGHSSLATTQIYTHVSAERLRRTVDQAHPRA 332 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 6/193 (3%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L EV A++ A RD L LAY G+R EL+ L ++ + R+ Sbjct: 122 LPYVLKPVEVAALLDRIPADTALALRDRALFELAYASGLRAEELVMLDVGSIEFDGERVR 181 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + P +A+ R+ + R A+ A+F+S+ G RLS R + Sbjct: 182 VEG-KGAKTRIVPAGEPALKAIARYLDRARPALATAESDGALFLSKSGRRLSTSDVRRRL 240 Query: 121 RDAGIEAGTVTQ---THPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 R +A V+ PH LRH+ L E GAD R IQ+ LGH +I T YT +A Sbjct: 241 RVWARQAAGVSTAGGVSPHALRHSFATHLLENGADLRSIQELLGHASISTTQVYTRVESA 300 Query: 178 RFAGLWERNNLIN 190 R + ++ Sbjct: 301 RLRSAYANSHPRA 313 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 299 4e-80 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 294 9e-79 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 292 5e-78 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 290 3e-77 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 288 6e-77 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 288 7e-77 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 286 3e-76 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 286 3e-76 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 284 9e-76 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 284 1e-75 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 284 2e-75 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 284 2e-75 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 282 4e-75 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 282 5e-75 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 282 5e-75 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 282 7e-75 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 281 1e-74 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 281 1e-74 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 281 1e-74 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 280 1e-74 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 280 2e-74 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 280 2e-74 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 280 2e-74 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 279 3e-74 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 279 4e-74 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 279 6e-74 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 278 8e-74 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 277 1e-73 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 277 1e-73 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 277 1e-73 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 277 1e-73 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 277 2e-73 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 275 5e-73 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 275 5e-73 UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria... 275 5e-73 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 275 8e-73 UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 274 9e-73 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 274 9e-73 UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter ... 274 2e-72 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 273 2e-72 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 273 2e-72 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 272 4e-72 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 272 4e-72 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 272 4e-72 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 272 5e-72 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 272 5e-72 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 271 9e-72 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 271 9e-72 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 271 9e-72 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 271 1e-71 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 270 2e-71 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 270 2e-71 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 270 2e-71 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 270 2e-71 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 270 2e-71 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 270 3e-71 UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteri... 269 3e-71 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 269 3e-71 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 269 4e-71 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 269 4e-71 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 269 4e-71 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 269 4e-71 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 268 6e-71 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 268 6e-71 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 268 1e-70 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 267 1e-70 UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacte... 267 1e-70 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 267 2e-70 UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobactera... 267 2e-70 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 267 2e-70 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 266 2e-70 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 266 4e-70 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 266 4e-70 UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorel... 265 4e-70 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 265 4e-70 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 265 5e-70 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 265 5e-70 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 265 5e-70 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 265 5e-70 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 265 6e-70 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 265 9e-70 UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteri... 264 1e-69 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 264 1e-69 UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcu... 264 1e-69 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 263 2e-69 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 263 2e-69 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 263 2e-69 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 263 2e-69 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 263 2e-69 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 263 2e-69 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 263 3e-69 UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes Rep... 263 3e-69 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 263 3e-69 UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus... 263 3e-69 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 262 3e-69 UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=... 262 4e-69 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 262 4e-69 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 262 4e-69 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 262 4e-69 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 262 4e-69 UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacte... 262 5e-69 UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobac... 262 5e-69 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 262 5e-69 UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteo... 262 5e-69 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 262 6e-69 UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetal... 262 6e-69 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 262 7e-69 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 261 1e-68 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 261 1e-68 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 261 1e-68 UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella fe... 260 2e-68 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 260 2e-68 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 260 2e-68 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 260 2e-68 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 260 2e-68 UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia Rep... 260 2e-68 UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobac... 260 2e-68 UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 260 2e-68 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 259 3e-68 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 259 3e-68 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 259 3e-68 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 259 3e-68 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 259 3e-68 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 259 4e-68 UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriacea... 259 4e-68 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 259 4e-68 UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetob... 259 5e-68 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 258 6e-68 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 258 6e-68 UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium Re... 258 6e-68 UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC 258 6e-68 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 258 9e-68 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 258 9e-68 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 258 9e-68 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 257 1e-67 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 257 1e-67 UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobi... 257 1e-67 UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ... 257 1e-67 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 257 1e-67 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 257 2e-67 UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella den... 256 3e-67 UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula stale... 256 3e-67 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 256 4e-67 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 255 4e-67 UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella kore... 255 5e-67 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 255 5e-67 UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vad... 255 6e-67 UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium... 255 6e-67 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 255 7e-67 UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured mar... 255 7e-67 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 255 8e-67 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 255 9e-67 UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococca... 254 1e-66 UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular orga... 254 1e-66 UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betapr... 254 1e-66 UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillu... 254 2e-66 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 253 2e-66 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 253 3e-66 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 253 3e-66 UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 253 3e-66 UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomyc... 253 3e-66 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 252 5e-66 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 252 6e-66 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 252 6e-66 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 252 6e-66 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 251 8e-66 UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneo... 251 8e-66 UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatu... 251 8e-66 UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychr... 251 1e-65 UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin... 251 1e-65 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 251 1e-65 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 250 1e-65 UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia... 250 2e-65 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 250 2e-65 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 250 3e-65 UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton ... 249 3e-65 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 249 3e-65 UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinom... 249 4e-65 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 249 4e-65 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 249 4e-65 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 249 4e-65 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 249 5e-65 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 248 5e-65 UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera arane... 248 6e-65 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 248 6e-65 UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyc... 248 6e-65 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 248 7e-65 UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithio... 248 8e-65 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 248 1e-64 UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter ... 248 1e-64 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 247 1e-64 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 247 1e-64 UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium... 247 1e-64 UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae D... 247 1e-64 UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga ... 247 2e-64 UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=unculture... 247 2e-64 UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepI... 247 2e-64 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 247 2e-64 UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium ... 247 2e-64 UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillu... 247 2e-64 UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramese... 247 2e-64 UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochr... 247 2e-64 UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulos... 247 2e-64 UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax... 246 3e-64 UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Prote... 246 4e-64 UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomi... 245 5e-64 UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collins... 245 5e-64 UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Coryneb... 245 6e-64 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 245 6e-64 UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae ... 245 7e-64 UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylaci... 244 1e-63 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 244 1e-63 UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=... 244 1e-63 UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia Rep... 244 1e-63 UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Br... 243 2e-63 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 243 2e-63 UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n... 243 3e-63 UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales R... 243 3e-63 UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacter... 242 4e-63 UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=... 242 4e-63 UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae... 242 5e-63 UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepI... 242 6e-63 UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collins... 242 6e-63 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 242 7e-63 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 242 7e-63 UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atop... 242 8e-63 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 241 8e-63 UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francise... 241 1e-62 UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acido... 241 1e-62 UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related... 240 1e-62 UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfo... 240 2e-62 UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteria... 240 2e-62 UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochlori... 240 2e-62 UniRef50_Q72AD1 Site-specific recombinase, phage integrase famil... 240 2e-62 UniRef50_C7NGY7 Site-specific recombinase XerD n=1 Tax=Kytococcu... 240 3e-62 UniRef50_C8N6J9 Tyrosine recombinase XerC n=1 Tax=Cardiobacteriu... 239 4e-62 UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desu... 239 4e-62 UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacte... 238 5e-62 UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybac... 238 5e-62 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 238 6e-62 UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ... 238 9e-62 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 238 1e-61 UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas a... 238 1e-61 UniRef50_C5BWU3 Integrase family protein n=11 Tax=Actinomycetale... 237 2e-61 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 237 2e-61 UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae... 237 2e-61 UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candid... 237 2e-61 UniRef50_Q72RY9 Tyrosine recombinase xerC n=6 Tax=Leptospira Rep... 237 2e-61 UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria... 237 2e-61 UniRef50_A5FIL1 Phage integrase family protein n=4 Tax=Flavobact... 237 2e-61 Sequences not found previously or not previously below threshold: >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 299 bits (767), Expect = 4e-80, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 4/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 ++ +V+A++ + RD ++ L Y GMR++EL++L+ D+DL EG Sbjct: 111 PLPDAISISQVRALLNQPVKSGSSEAKRDKAMLELLYASGMRVTELVNLNVLDVDLKEGF 170 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYR 118 + K + P+ ++++ + + R N A+ A+F++RRG RL+RQ ++ Sbjct: 171 VRCFG-KGRKERMIPIYPQAAQSIQEYLTEIRPNLVRAETEKALFLNRRGDRLTRQGLWQ 229 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I++ EAG PH LRH+ + GAD R +Q+ LGH NI T YT + Sbjct: 230 ILKGYAREAGLDDVVTPHTLRHSFATHMLSGGADLRSVQELLGHANISTTQIYTHLTSEH 289 Query: 179 FAGLWERNNLINE 191 +E+ + + Sbjct: 290 IKRSYEKAHPRAK 302 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 294 bits (755), Expect = 9e-79, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 4/193 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + LT EV ++ + G RD ++ L Y GMR+SEL+ L DL L G + Sbjct: 106 LPKALTVDEVTQVLNSCDTSTVLGLRDKAMLELLYATGMRVSELITLKLSDLHLELGFLQ 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD--AIFISRRGSRLSRQQAYRI 119 K + P+ V+ + + +F++ RG+ +RQ ++ Sbjct: 166 TIG-KGNKQRIIPIGQAATNWVQHYLTYARVVLEQESNPVEYLFLNHRGNGFTRQGFWKN 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ EAG PH LRH+ + E GAD R++Q+ LGH +I T YT R Sbjct: 225 LKKIVQEAGVHKDVSPHTLRHSFATHILEAGADLRIVQELLGHSDISTTQIYTHLTNERM 284 Query: 180 AGLWERNNLINEK 192 ++++ + +K Sbjct: 285 KEIYQQAHPRAKK 297 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 292 bits (749), Expect = 5e-78, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ +EV +M+ G RD ++ L Y G+R+SELL L +DL+ G + Sbjct: 107 KLPQVLSIEEVDKLMEQPNPVVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLNPTAGFL 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ + V+R+ + R + +F++ RG LSRQ ++I Sbjct: 167 RCMG-KGRKERIIPVNQTSIDWVQRYLARVRNSLVKNPLERTLFLNARGRPLSRQGFFKI 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + +A + PH LRH+ L E GAD R +Q+ LGH +I T YT +R Sbjct: 226 LGNYVEKAELEKEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHLTKSRL 285 Query: 180 AGLWERNNLIN 190 ++++ + + Sbjct: 286 REVYQQYHPRS 296 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L EV+ ++ G RD ++ L Y G+R+SE+++L D+ L+ G I Sbjct: 108 LPKVLALNEVERLLDTPKLTSPFGYRDKAMLELLYATGIRVSEMIELKTADVHLSMGFIR 167 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 K + P+ A+E + + R + +DA+F++ G ++SRQ ++ + Sbjct: 168 CFG-KGRKERIVPIGEAAASAIEEYMTKARGKLLKNNVSDALFLNHHGKQISRQGFWKNL 226 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + +EAG + PH LRH+ L E GAD R +Q+ LGH +I T YT R Sbjct: 227 KKIALEAGIKKELTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLK 286 Query: 181 GLWERNNLIN 190 ++++ + Sbjct: 287 DVYKQFHPRA 296 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 288 bits (739), Expect = 6e-77, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 3/196 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M L KE+++ ++ G R+ ++ Y G+R+SEL++L+ Q++DL E Sbjct: 103 MYLPEVLDPKEIESFLKIPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDLEEKY 162 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + PL E+++R+ R + +A+F++++G R++RQ + I Sbjct: 163 VRCFG-KGEKERIVPLGDYAVESLKRYLSVR-HLFNPKDKEALFLNKKGERITRQGVWFI 220 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G + PH RH+ L GAD R++Q+ LGH +I T YT +++ Sbjct: 221 IKAYSKILGLPKKVSPHTFRHSFATHLLSNGADIRIVQELLGHSDIATTQIYTHIVSSKL 280 Query: 180 AGLWERNNLINEKLKR 195 +++R + + + + Sbjct: 281 HEVYQRAHPLMRRNTK 296 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 288 bits (739), Expect = 7e-77, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L EV A+++ G RD ++ L Y GMR+SEL+ L ++++L G + Sbjct: 106 KLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNLIMGFV 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + PL E + + + R T+ +F++ G LSRQ +++ Sbjct: 166 RVFG-KGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKM 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G++A PH LRH+ L E GAD R +Q+ LGH +I T YT + ++ Sbjct: 225 IKQNGVKANIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQI 284 Query: 180 AGLWERNNLIN 190 ++ + + Sbjct: 285 RKMYNQFHPRA 295 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 6/197 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGA-RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++LT + +++A RD ++ L Y G+R+SEL L+ +DLDL EG I Sbjct: 106 LPKFLTVDDAFKLVEAPSEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDLKEGLIK 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGAD----RTDAIFISRRGSRLSRQQAY 117 +R K + P+ +EA++++ R + +FI+ RG R+S +Q Sbjct: 166 VRG-KGKKERIVPVGQKAKEALKKYLAIRQILRIKKKLSLDETPLFINNRGQRISDRQVR 224 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 RI+ G + + PH LRH L GAD R+IQ+ LGH ++ T YT + Sbjct: 225 RIVEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYTHVDLK 284 Query: 178 RFAGLWERNNLINEKLK 194 ++++++ ++++ + Sbjct: 285 HLIEVYDKSHPLSKEDE 301 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 286 bits (733), Expect = 3e-76, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ KEV+ +++ G RD ++ L Y G+R+SEL+ L D++L I Sbjct: 108 KLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDVNLEMQYI 167 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ A++ + + R A+F++ G RL+RQ ++I Sbjct: 168 RC--NKGARERIVPIGSVSVNALQEYLTKSRNLLIQRPDEKALFVNVNGKRLTRQGFWKI 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ +A PH LRH+ L E GAD R IQ+ LGH +I T Y R Sbjct: 226 IKQYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQLAKNRI 285 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 286 KEIYKKTHPRA 296 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 284 bits (729), Expect = 9e-76, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 3/191 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M L+ +E+ ++ + RD ++ L Y G+R+SEL+ L ++ G Sbjct: 106 MRLPDTLSHEEMDQLLSQPGVRTDSAIRDTAMLELMYATGLRVSELISLTTGSINWQVGY 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYR 118 + ++ K + P+ E V R+ E R +T+ +F+++ G ++RQ ++ Sbjct: 166 LVVQG-KGNKERIVPIGQVAYEHVRRYFDEVRPKCIRGAQTNVLFLNKSGQGMTRQGFWK 224 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 ++R ++AG + HPH RH+ L E GAD R +Q LGH +I T YT Sbjct: 225 LVRKYAVKAGLQKKVHPHTFRHSFASHLLEGGADLRSVQMMLGHADISTTQIYTHVTREH 284 Query: 179 FAGLWERNNLI 189 + ++ + Sbjct: 285 LKDIHKKYHPR 295 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 284 bits (728), Expect = 1e-75, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 96/195 (49%), Gaps = 3/195 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + + +++ ++ + + + RD ++ L Y G+R+SEL L D+DL + + Sbjct: 114 LPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGLDLGDMDLAGREVRL 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P+ EA+ RW R + + +A+F+++RG RLS + +++ Sbjct: 174 LG-KGNKERIVPIGSKALEALNRWLAVRNQF--KPQDNAVFLNKRGGRLSHRSIQLVMQK 230 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 G + G + HPH LRH+ + E D R +Q+ LGH N+ T YT + A + Sbjct: 231 WGEKQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSNLATTQIYTHLDFQHLAKI 290 Query: 183 WERNNLINEKLKREE 197 ++ + ++ K+++ Sbjct: 291 YDAAHPRAKRKKQDD 305 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L +V+ ++ + G RD ++ + Y G+R++EL+ L DL L+ G I Sbjct: 108 LPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLHLHMGFIQ 167 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGAD-RTDAIFISRRGSRLSRQQAYRI 119 K + PL +E++ +E R + R D +F++ G L+RQ ++I Sbjct: 168 TIG-KGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKI 226 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ E+G PH LRH+ L E GAD R +Q+ LGH +I T YT R Sbjct: 227 LKGIAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKLRL 286 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 287 KDVYKQFHPRA 297 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 2/188 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V+A++ A G RD + + Y G+R+SELL+L + ++L +G + Sbjct: 119 LPKDLSEQDVEALINAPDISTTLGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGFVR 178 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + PL + +E++ E TD +F+++ G +SRQ + I+ Sbjct: 179 ITG-KGNKERLVPLGQYACDWIEKYLAESRPQLYKSNTDYLFLTQHGGIMSRQNFWYAIK 237 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 ++A + PH LRHA L GAD R++Q LGH ++ T YT R Sbjct: 238 RYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQA 297 Query: 182 LWERNNLI 189 L + + Sbjct: 298 LHHQYHPR 305 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 4/192 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + + L EV+ ++ + RD ++ L Y G+R+SEL+ L D++ G I Sbjct: 106 LRLPKALEIDEVKRLLSVMLESKYYLRDIAMLELMYASGLRVSELVRLKLSDINFEAGFI 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 ++ K V P+ + ++ + + R ++ +F++ RG ++RQ+ ++ Sbjct: 166 RVKG-KGDKERVVPIAQRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQPMTRQRFWQN 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G AG PHM+RH+ L E GAD R +Q LGH +I T YT + R Sbjct: 225 IKAIGRIAGV--NVTPHMIRHSFATHLLEGGADLRSLQKMLGHSDISTTQIYTKVSMDRL 282 Query: 180 AGLWERNNLINE 191 + +++ + Sbjct: 283 RKEYLKHHPRAK 294 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 2/188 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V+A++QA A G RD + + Y G+R+SELL+L + ++L +G + Sbjct: 119 LPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLR 178 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + PL + VER+ E TD +F+++ G +SRQ + I+ Sbjct: 179 ITG-KGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIK 237 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 ++A + PH LRHA L GAD R++Q LGH ++ T YT R Sbjct: 238 HYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQ 297 Query: 182 LWERNNLI 189 L E+++ Sbjct: 298 LHEKHHPR 305 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EV ++ A RD ++ LAY G+R+SE + + +D+ L + + Sbjct: 123 TLPEVLSVDEVTRLLAAPGLDERLAFRDRAMLELAYGAGLRVSEWIGMSVKDVMLEDSLV 182 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + P+ AV + +E R + +F++ RG+ LSR A+++ Sbjct: 183 RVLG-KGNKERLVPIGRSAIGAVAVYLRELRPVLERGGGKGILFLNGRGAPLSRMGAWKL 241 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R AG PH LRH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 242 VRKYVGMAGIEKPVSPHTLRHSFATHLLEGGADLRAVQEMLGHADIATTQIYTHVDREYL 301 Query: 180 AGLWERNNLIN 190 + + + Sbjct: 302 RSVHRQFHPRA 312 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 7/190 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +++ + + ++ +G RD ++ Y GMR+SEL+ ++ D+D + G + Sbjct: 115 KLPGFMSVNDTEILLNQPDTCNLSGLRDKAIMETLYSTGMRVSELVGINIADIDFHSGIV 174 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K + P+ A++ + ++R +A+F+++ RL+ + R+I Sbjct: 175 KVRG-KGSKERILPVGNHALNAIQLYLEKRKA-----DNEALFLNKFHGRLTERSVARMI 228 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +A + PH RH+ L + GAD R +Q++LGH ++ T YT R Sbjct: 229 EKYMKKAAMHLRVSPHTFRHSFATHLLDNGADLRAVQEFLGHSSLSTTQIYTHVTTERLK 288 Query: 181 GLWERNNLIN 190 ++++ + Sbjct: 289 QVYDKTHPRA 298 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + ++ +EV+ + A G RD ++ + Y GMR+SELL L ++L + Sbjct: 112 LPKVMSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYV- 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANW--KGADRTDAIFISRRGSRLSRQQAYRI 119 I K + PL + ++++ + K D++F++ RG+ ++RQ+ ++I Sbjct: 171 IAYGKGAKERLIPLGQYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQI 230 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 IR G++AG PH+LRH+ + + GAD R +Q+ LGH +I T YT R Sbjct: 231 IRAYGVKAGLQKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTNNRL 290 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 291 KKVFDKTHPRA 301 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 3/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +LT EV +++ G RD + L Y G+R+SEL+ L ++LDL+ +I Sbjct: 107 LPEFLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDLHSHQIR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + ++++ + R KG T A+F++ G RLS + + Sbjct: 167 VWG-KGSKERIVLMGLPAIQSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSARSFQERL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +AG HPHMLRH L + GAD R++Q+ LGH N+ T YT ++ Sbjct: 226 DKLAHQAGIEKHVHPHMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYTHVTKSQAR 285 Query: 181 GLWERNNLINE 191 ++ ++ + + Sbjct: 286 KVYMSSHPLAK 296 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 3/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + LT E++A++ G R+ L+ Y G R+SE+ +L DL G I Sbjct: 113 LPQVLTATEIEAVLAVPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLHDELGLIT 172 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 K + P+ + ++ +E R + +F++ G R+SRQ ++++ Sbjct: 173 TIG-KGQKQRIVPIGEMSLLYISKYFKESRPILLKDKESPYLFLNDHGHRISRQGIFKLV 231 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++ I+AG PH LRH+ L E GAD R++Q+ LGH +I T YT + Sbjct: 232 KEIAIKAGIDKDISPHTLRHSFATNLLENGADLRIVQELLGHSDISTTQIYTHVSQKHIR 291 Query: 181 GLWERNNLINE 191 + R + + Sbjct: 292 EQYNRFHPRAK 302 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 280 bits (719), Expect = 1e-74, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + +YL +E++ ++QA G RD ++ + Y G+R+SEL L DLDL + Sbjct: 113 TIPKYLNLEEIERIIQAPDLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLDLEYQVL 172 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ AV + + R + +F++ RG ++RQ +++ Sbjct: 173 RTTG-KGNKQRLVPVGKAAVLAVRAYLESGRPGLLKGRASRYLFVTARGGCMTRQGFWKL 231 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + G +AG PH+LRH+ L E GAD R +Q LGH +I T YT +R Sbjct: 232 LAAYGRKAGIFHGLTPHVLRHSFATHLLEGGADLRSVQVMLGHADISTTQIYTHVMRSRL 291 Query: 180 AGLWERNNLIN 190 E+++ Sbjct: 292 RATVEKHHPRA 302 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 3/196 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EV ++++ + G R+ L+ L Y G+R+SELL++ +D+ + + + Sbjct: 107 TLPTVLSVDEVISILEVIDKSTTLGLRNMALLELIYGSGLRVSELLNIKLKDIHMQQSYV 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ A+ + + + ++TD +FI+ +G LSR ++++ Sbjct: 167 IVTG-KGSKERMVPISDMAIIAIRNYLVKARDDLIKEKTDYLFINNQGKTLSRVGFFKVL 225 Query: 121 RDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + EA + PH LRH+ L E G D R +Q+ LGH +I T YT + +R Sbjct: 226 KKLASEANLDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTHISQSRL 285 Query: 180 AGLWERNNLINEKLKR 195 ++ + + ++ + Sbjct: 286 KQVYNKTHPRAKENNK 301 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 280 bits (717), Expect = 2e-74, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 97/191 (50%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V ++++A RD ++ L Y G+R++EL+ L +++ L +G + Sbjct: 131 LPKDLSEEQVDSLLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVR 190 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K G + P+ + + +E + ++ R G + +D +F S+R +++RQ + I Sbjct: 191 VIG-KGGKERLVPMGENAVDWIETFIEQGRPQLLGDNSSDVVFPSKRAKQMTRQTFWYRI 249 Query: 121 RDAGIEAGTVTQT-HPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + AG T+ PH+LRHA L GAD R++Q LGH ++ T YT R Sbjct: 250 KHYSVIAGIDTELLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERL 309 Query: 180 AGLWERNNLIN 190 + +++ Sbjct: 310 KQIHAQHHPRA 320 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 280 bits (717), Expect = 2e-74, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 4/193 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M + L+ EV + +A G RD ++ + Y GMR+SELL L ++L Sbjct: 107 MVLPKVLSVDEVNRLFEAPDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHY 166 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGA-DRTDAIFISRRGSRLSRQQAY 117 + I K + PL E ++ + + R ++ D +F++ RG+ ++RQ+ + Sbjct: 167 V-IAYGKGAKERLIPLGHYAIEYLKEYLSRVRPHFVKENRPCDDLFLTIRGTGMTRQRFW 225 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 ++I++ G++ PH+LRH+ + + GAD R +Q+ LGH +I T YT Sbjct: 226 QLIKNYGLKVHIAKSLTPHILRHSFATHMLDNGADLRTVQELLGHSDISTTQIYTHLTNH 285 Query: 178 RFAGLWERNNLIN 190 R ++++++ Sbjct: 286 RLKAIYDKSHPRA 298 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 279 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 3/196 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +LT ++ +++A G RD ++ Y G+R+SEL+ L+ D D + I Sbjct: 119 KLPHFLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWDQDANII 178 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSRLSRQQAYRI 119 + K + P+ +A+ W +ER GA +DA+F++R +RL+ + R+ Sbjct: 179 RVLG-KGRKERIAPIGSFAAKALTHWLEEREAKPGAHPDSDALFLNRLKTRLTSRSVGRM 237 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + ++ G +T PH LRH L + GAD R +Q+ LGH+++ T YT + R Sbjct: 238 LEKYLLQTGLDKKTSPHTLRHTFATHLLDGGADLRSVQELLGHKSLTTTQIYTHVSTKRL 297 Query: 180 AGLWERNNLINEKLKR 195 +E+ + ++ K+ Sbjct: 298 LETYEKAHPHAQRSKK 313 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 279 bits (715), Expect = 4e-74, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 2/190 (1%) Query: 4 RRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L E++ +++ + G RD + L Y G+R+SE + L +D+D + ++I Sbjct: 114 PEFLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVDFADNILHI 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P +E + + ++ + A+F+++RG +L+ + ++ Sbjct: 174 HG-KGDKERLVPFYDLAKELLVSYIKDVRDVWATSDETALFVNQRGKKLTTRGVQYLMNK 232 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 A + HPHM RH+ L + GAD R +Q+ LGH ++ T Y + R Sbjct: 233 AVEKCDLHVHVHPHMFRHSFATHLLDNGADLRYVQELLGHSSLSTTQIYVHVSKERLKAA 292 Query: 183 WERNNLINEK 192 +E + ++ Sbjct: 293 YEHAHPRAKE 302 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 279 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 6/193 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S + L+ +V++++ A G RD ++ + Y G+R+SEL++L + ++LN G + Sbjct: 120 SLPKDLSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLRVSELMNLSLEQVNLNAGWL 179 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA----NWKGADRTDAIFISRRGSRLSRQQA 116 I K + + PL +A++ + + A+F++ +G ++RQ Sbjct: 180 QITG-KGNKTRLVPLGEYASDALDDYLTHARGELVAHLKSGNCQAVFLTTQGGYMTRQNF 238 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 + +I+ +AG + PH LRHA L GAD R +Q LGH ++ T YT Sbjct: 239 WYMIKKYAKQAGIQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQIYTHVAT 298 Query: 177 ARFAGLWERNNLI 189 AR L E ++ Sbjct: 299 ARLQQLHEAHHPR 311 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 278 bits (712), Expect = 8e-74, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 5/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L KE+ ++ G RD ++ Y GMR+SEL++L QDL + G + Sbjct: 111 LPVALNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQDLHEDLGLVR 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERAN---WKGADRTDAIFISRRGSRLSRQQAYR 118 + K + P+ ++++ +E + K + IF++ R +L+RQ ++ Sbjct: 171 VLG-KGSKERLIPISSVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLTRQAIWQ 229 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +I+ AG PH LRH L E GAD R++Q+ LGH +I T YT + Sbjct: 230 MIKKYCQSAGITKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYTNLSQKH 289 Query: 179 FAGLWERNNLI 189 ++++ + Sbjct: 290 ILQVYQKTHPR 300 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 1/192 (0%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ +V ++ RD ++ Y G+R+SEL+++H D+D NE + Sbjct: 103 KLPQTLSIDQVFNLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTNEQTLK 162 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + PL EA++ W +R + +F++++G +L+ + ++ Sbjct: 163 VLG-KGNKFRIVPLGRKAIEALDLWILQRNKLNKLVDDEFLFLNQQGKKLTARAIQYRLK 221 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + HPH+LRH+ + + D R +Q+ LGH NI T YT + + Sbjct: 222 FWAQKNNIPENIHPHLLRHSFASHVLQSSQDLRAVQELLGHSNISTTQIYTHLDFQHLSK 281 Query: 182 LWERNNLINEKL 193 ++++ + ++K Sbjct: 282 IYDQAHPRSKKK 293 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 2/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L ++ +++ RD ++ L Y G+RISEL+ + QD+ G I Sbjct: 124 PLPKNLDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANLQDISAANGEIL 183 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 +R K + P+ A+++W R + A+F+S + +R+S +Q ++ Sbjct: 184 VRG-KGNKERLIPVGSKALNALKKWLIIRPQFAN-PDEVAVFLSSKKNRISVRQVRLRMQ 241 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + GI+ G +Q HPH LRH+ + E D R +Q+ LGH ++ T YT + A Sbjct: 242 EWGIKQGISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQHLAK 301 Query: 182 LWERNNLINEK 192 +++ + +K Sbjct: 302 VYDNTHPRAKK 312 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + ++ ++V A++ A RD ++ L Y G+R++EL+ L +++ L +G + Sbjct: 116 LPKDISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVR 175 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K G + P+ + + +E + ++ R G +D +F S+R +++RQ + I Sbjct: 176 VTG-KGGKERLVPMGENAIDWIETFIKQGRPALLGETSSDVVFPSKRARQMTRQTFWHRI 234 Query: 121 RDAGIEAGTV-TQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + AG PH+LRHA L GAD R++Q LGH ++ T YT R Sbjct: 235 KFYAVIAGIDTDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERL 294 Query: 180 AGLWERNNLIN 190 + +++ Sbjct: 295 KQIHSQHHPRA 305 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 277 bits (710), Expect = 1e-73, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ +EV+ ++ G RD ++ L Y G+R+SEL+ L+ D++ + G I Sbjct: 106 KLPQILSTQEVELLLDQPKCLDLKGIRDKAMLELLYATGIRVSELISLNLDDINFDLGLI 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K P+ AV + ++ R + A+F++ G RL+RQ ++I Sbjct: 166 KC--NKGTRERTIPIGSISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQGFWKI 223 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ +A PH LRH+ L E GAD R IQ+ LGH +I T Y + Sbjct: 224 IKHYKNQAKINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQIAKNKI 283 Query: 180 AGLWERNNLIN 190 ++++ + Sbjct: 284 KDVYKKTHPRA 294 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 5/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 S LT ++V +++A RD +I L Y GMRISE L+L +D N Sbjct: 135 SLPHALTVEQVNRLIEACPVNESSNPIALRDRAVIELLYGTGMRISEALNLDIDSIDRNH 194 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 + + K + P+ A++ W A+F++ RG+RL RQ + Sbjct: 195 AYVRVVG-KGRKERLVPIGAPALHAIDAWLVRGRPSMVKRSDKALFLNARGNRLGRQSVW 253 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 + + A G PH LRH+ L + GAD R +Q+ LGH ++ T YTA + Sbjct: 254 KFLHAAAERCGLGDSVGPHTLRHSYATHLLQGGADIRAVQELLGHASVTTTQIYTAVSID 313 Query: 178 RFAGLWERNNLIN 190 ++ ++ Sbjct: 314 NLREVYATSHPRA 326 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 275 bits (705), Expect = 5e-73, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 7/195 (3%) Query: 2 SKRRYLTGKEVQAMMQAVC---YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 + L+ EV ++ A R+ ++ L Y G+R++EL L +D G Sbjct: 147 PLPKTLSESEVSCLLSAAERRGDEPLALRNLAMVELFYASGLRVAELCGLDLGSVDAGLG 206 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADR--TDAIFISRRGSRLSRQQ 115 + + K G + P+ EA+ R+ ++ R R + A+F++ RG RLS + Sbjct: 207 YVRVLG-KGGKERIVPVGEQALEAISRYLKQGRPALARRQREVSPALFLNHRGRRLSVRG 265 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A I+ A PH LRH L + GAD R +Q+ LGH + T YT + Sbjct: 266 AQDILSRIADGAALERGISPHTLRHTFATHLLDGGADLRSVQEMLGHAKLSTTQIYTHVS 325 Query: 176 AARFAGLWERNNLIN 190 A R ++ + + Sbjct: 326 AERLKEIYHKTHPRA 340 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 275 bits (705), Expect = 5e-73, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ EV ++++ ARD ++ L Y G+R+SEL L LDL +G + Sbjct: 139 LPVVLSVDEVFSLLEMPGAGDRFAARDRAILELLYATGLRVSELAGLDLAQLDLADGMVR 198 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWK-----------GADRTDAIFISRRGSR 110 + K + P+ A+E + +R A D + ++ RG R Sbjct: 199 VVG-KGNKERLVPMGTAAVAAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLVNSRGGR 257 Query: 111 LSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVR 170 L+ + R+++ AG + PH LRH+ L E GAD R++Q+ LGH ++ T R Sbjct: 258 LTSRSIERLVKMYAERAGIAARVSPHALRHSFATHLLEMGADLRVVQELLGHASLSTTQR 317 Query: 171 YTASNAARFAGLWERNNLIN 190 YT N ++++ + + Sbjct: 318 YTHLNLDHLTAVYDQAHPLA 337 >UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria RepID=Q2C2Q0_9GAMM Length = 302 Score = 275 bits (705), Expect = 5e-73, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 2/194 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L E+ ++ RD ++ L Y G+R++EL+ + + + L++G + Sbjct: 111 PLPKNLDVDEMNQLLDVNDDDPLAIRDRAMMELMYGAGLRLAELVGIDVRHISLSKGDLR 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K V P RE V +W + R N A A+F+S+ G+R+S + + + Sbjct: 171 VIG-KGDKERVVPFSGLAREWVAKWLKLRDNIALA-EEPALFVSKLGTRISTRNVQKRMA 228 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G + + +PH LRH+ + E D R +Q+ LGH N+ T YT + A Sbjct: 229 EWGQKQAVSSHINPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQHLAK 288 Query: 182 LWERNNLINEKLKR 195 +++ + +K + Sbjct: 289 VYDEAHPRAKKRNK 302 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 275 bits (704), Expect = 8e-73, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDL-----DLN 56 + +T EV +++A TG RD L+ Y G RISE + L D+ D Sbjct: 164 LPKAITVDEVTRILEAAGTDTATGLRDRALLEFLYSTGARISEAVGLDVDDISLAGDDTE 223 Query: 57 EGRINIR-RLKNGFSTVHPLRFDEREAVERWT-QERANWKGADR-TDAIFISRRGSRLSR 113 +G +R K + PL A+E + + R + T A+F++ RG R+SR Sbjct: 224 QGPAIVRLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKGKGTPALFLNARGGRISR 283 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 Q A+ I++ A +A PH LRH+ L E GAD R++Q+ LGH ++ T YT Sbjct: 284 QSAWTILKVAAEKANITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTL 343 Query: 174 SNAARFAGLWERNNLIN 190 A ++ + Sbjct: 344 VTADTLREVYAAAHPRA 360 >UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 Length = 301 Score = 274 bits (703), Expect = 9e-73, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 5/198 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 ++L+ EV ++ + G RD +I Y G+R+SEL+ ++ +D++ N G I Sbjct: 107 KLPQFLSVDEVMKLLNSPSLDDLIGIRDRAIIETLYATGIRVSELVGMNEEDINWNYGEI 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + + + ++ + A F++ +G R+S + II Sbjct: 167 RVFG-KRAKERIVIVGEETLKILQLYKDHVRPKLLKKPEKAFFLNAKGGRISDRAIRMII 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + + PH LRH L E GAD R +Q+ LGH I T YT + + Sbjct: 226 KKYTKD--FNKKVSPHTLRHTFATHLLEGGADLRYVQELLGHVRISTTQIYTHLTSEQIR 283 Query: 181 GLWERNNLIN-EKLKREE 197 + ++ +K +EE Sbjct: 284 KTYTLSHPRAIKKETKEE 301 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 274 bits (703), Expect = 9e-73, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+G E+ A+M G RD + L Y G+R+SE++ L L L + Sbjct: 105 LPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAMNLLQ 164 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ + V R+ QE R + A+F++ G L+RQ ++ + Sbjct: 165 VTG-KGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQVIWKNL 223 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + G PH LRH+ L E GAD R++Q+ LGH +I T YT + Sbjct: 224 KAYIASVGIEKDVTPHTLRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLV 283 Query: 181 GLWERNNLI 189 ++ + + Sbjct: 284 AVYHKTHPR 292 >UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXM2_DICNV Length = 297 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + ++ +V+A++ A G RD ++ L Y G+R+SEL+ L + L+ G + Sbjct: 108 LPQTMSESDVEALLSAPDVQTILGLRDRAMLELLYACGLRVSELVGLTLHQIALDVGYVQ 167 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 I K + P E ++R+ QE R G +D +F+S+RG+ LSRQ + + Sbjct: 168 ILG-KGDKERLVPFGEIAHEWLQRYIQEARPQLLGQKMSDYVFVSQRGAALSRQAFWYRL 226 Query: 121 RDAGIEAGTVT-QTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + G + + PH LRHA L GAD R IQ LGH ++ T YT R Sbjct: 227 KVYVCAVGLDSNKISPHTLRHAFASHLLAHGADLRSIQMLLGHSDLSTTQIYTHIADQRL 286 Query: 180 AGLWERNNLIN 190 L+ +++ Sbjct: 287 KSLFMKHHPRA 297 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 2/195 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L EV +++ RD ++ L Y G+R++EL+D+ +D+ L G I Sbjct: 118 PLPKNLDVDEVNQLLEVNEDDPLAIRDRAIMELMYGAGLRLAELVDIDVRDVHLRSGEIR 177 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K P E V +W + R+ A+F+S+ G+R+S + + + Sbjct: 178 VIG-KGNKERKVPFAGMAVEWVGKWLKVRSGLAD-PSEPALFVSKLGTRISHRSVQKRMA 235 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G + + PH LRH+ + E + R +Q+ LGH NI T YT + A Sbjct: 236 EWGQKQAVASHITPHKLRHSFATHILESSNNLRAVQELLGHENISTTQIYTHLDFQHLAD 295 Query: 182 LWERNNLINEKLKRE 196 ++++ + K + Sbjct: 296 VYDQAHPRARKKSSQ 310 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 4/188 (2%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT EV ++ ++ R+ ++ L Y G+R+SEL++L + D++L + + Sbjct: 109 LPDILTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDINLEDCFLR 168 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + P + + + ++R D IFISR G +LSR + +R ++ Sbjct: 169 IIG-KGSKERLVPFGNKAKFFISIYLKKRRPCLNV--NDHIFISRLGKKLSRIEFWRQLK 225 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G PH LRH+ L + GAD R +Q+ LGH +I T YT + R Sbjct: 226 NIAKNVGINKNITPHTLRHSFASHLLKGGADIRFVQEMLGHASITTTQIYTHLDEDRIVQ 285 Query: 182 LWERNNLI 189 ++ + Sbjct: 286 QHKKFHPR 293 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 5/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L +EV +++ G RD ++ L Y G+R++EL L D+DL + Sbjct: 111 KLPVFLDEREVAELLELPADDVLGRRDAAILELLYATGIRVAELTGLKTSDVDLVSRFVI 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANW---KGADRTDAIFISRRGSRLSRQQAY 117 + K + P+ A+ER+ R ++ +FI+ +G L+ + Sbjct: 171 VCG-KGAKERIVPIGRTAAAALERYLADARPRLYSKWRKEQHQFLFINSKGGPLTDRSVR 229 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 RII + PH +RH + GAD R +Q+ LGH N+ T YT Sbjct: 230 RIIDKYIANLAVAKKVSPHTIRHTFATHMLNNGADLRSVQEMLGHVNLSTTQLYTHVTKE 289 Query: 178 RFAGLWERNNLIN 190 R ++ + Sbjct: 290 RLKAVYRETHPRA 302 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 3/191 (1%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + +++ ++ A G R+ ++ L Y G R+SE+ + ++L G I Sbjct: 106 KLPYVVPIHKIEDLLSAADVKTKLGIRNKAILELLYATGARVSEVATISLNGINLEYGYI 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + PL A++ + R K + + +F+SR G L R+ + I Sbjct: 166 KCKG-KGSKERIVPLGKKASIAIQEYLTTVRPQIKDSQNSHYLFLSRTGRPLRRENIWLI 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +++ ++AG PH LRH+ L E GAD R +Q+ LGH +I T YT N Sbjct: 225 VKNCALKAGITEAISPHKLRHSFATHLLENGADLRAVQEMLGHVSISTTQIYTHVNKQHL 284 Query: 180 AGLWERNNLIN 190 + ++ + Sbjct: 285 KAIHQKFHPRA 295 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 3/190 (1%) Query: 4 RRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 LT +E+ ++ A A RD L+ L Y G+R+SEL L Q +DL G + + Sbjct: 125 PGTLTEEEIARLLAAPTGGDARALRDRALLELFYSSGLRVSELAGLLLQQVDLEHGFLRV 184 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K V P+ EA+ + R ++ + +F+++ G LSR + +++ Sbjct: 185 FG-KGAKERVVPIGGKAIEALATYLTAGRPHFVRSRTGSQLFLNKNGGPLSRVMLWMLVK 243 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 AG PH LRH+ L GAD R IQ+ LGH +I T YT+ + R Sbjct: 244 KYAKRAGLTKNVKPHGLRHSFATHLLSGGADLRAIQEMLGHASISTTQIYTSVESQRLLE 303 Query: 182 LWERNNLINE 191 ++ + N Sbjct: 304 QHDKFHPRNR 313 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 272 bits (697), Expect = 5e-72, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 5/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L +E+ + +A RD ++ L Y GMR+ E L D+DL G Sbjct: 130 KLPSFLYEEEMDELFKAFEGNTPLDKRDRAILELLYATGMRVGECSQLDVADIDLRIGTA 189 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA---NWKGADRTDAIFISRRGSRLSRQQAY 117 ++ K P+ +A+ + ++ KG T +F++ RG L+ + Sbjct: 190 FVKG-KGNKERYVPIGSFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGGPLTDRSIR 248 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 R++ EA PH LRH+ L GAD R++Q+ LGH ++ T YT Sbjct: 249 RMLAKRVEEASMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHEHLSTTQVYTHVTKD 308 Query: 178 RFAGLWERNNLIN 190 R +++ ++ Sbjct: 309 RLREVYKNHHPRA 321 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 272 bits (697), Expect = 5e-72, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 3/197 (1%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EVQ ++ G RD L+ L Y G+R SE +D+ +LD+++G + Sbjct: 124 KLPKVLSRDEVQHLLSQPRGTGPAALRDRALLELMYACGLRASEAVDMQLDELDVDDGIL 183 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ +A+ + + R G +F+++RG L+RQ Y+I Sbjct: 184 RANG-KGNKERLVPIGSKALDALRHYLTRGRPQMVGLREEKRVFVNQRGHGLTRQGLYKI 242 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ AG + PH LRH L G D R +Q+ LGH +I T YT +A R Sbjct: 243 VQRHARTAGLGDKMSPHTLRHTFATHLLAGGCDLRSLQEMLGHADIATTQIYTHLSAERL 302 Query: 180 AGLWERNNLINEKLKRE 196 ++ + + + Sbjct: 303 RDVYFDAHPRAQLGSDD 319 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 271 bits (695), Expect = 9e-72, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 4/187 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L +EV +M A G RD + L Y G+R+SE+ L +D + I Sbjct: 118 LPDILDIEEVDLLMNQPDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTIYSID--DQYIR 175 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ AV+++ +++ ++F++ RG + R +R I+ Sbjct: 176 VYG-KGSKERIVPIGSQALMAVDQYLSLYRWQWDSEKEQSLFVTLRGKSMDRISIWRSIK 234 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + +AG PH LRH+ L GAD R+IQD LGH NI T RYT ++A Sbjct: 235 EYAQQAGITKTISPHTLRHSFATHLLNNGADLRVIQDLLGHANISSTDRYTRVSSAHLQE 294 Query: 182 LWERNNL 188 + R + Sbjct: 295 AFHRFHP 301 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 271 bits (695), Expect = 9e-72, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 +S ++ KE++ ++ +V G R+ ++ Y G+R+SEL+ + ++++L Sbjct: 38 LSLPEVISSKEMELLIDSVDTKNPRGLRNAAMLETLYGAGLRVSELVSMKMENINLEASF 97 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYR 118 I I K + P+ E V W R + +F++R G ++RQ ++ Sbjct: 98 IRIFG-KGSKERIVPIGSFAIEKVRNWIMHGRPIILKNIPSHYLFVARAGKPMTRQGFWK 156 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ +G + PH RH+ L E GAD R +Q LGH +I T YT + Sbjct: 157 LLKKYSRASGISKKITPHTFRHSFATHLLEGGADLRSVQTMLGHSDISTTQIYTHVSRDY 216 Query: 179 FAG 181 Sbjct: 217 LRK 219 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 271 bits (694), Expect = 9e-72, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 3/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + +V +++ + G RD L+ L Y G+R+SEL++ ++LDL+ I Sbjct: 126 LPETMNELQVDRLLEGISIDAPRGLRDRALLELLYASGLRVSELVNARLENLDLDARIIR 185 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ +A+ + + ER G +F+S RG++L+ + ++I+ Sbjct: 186 VTG-KGNKMRLVPVGQKACDAIRAYLEKERPEMVGKKTGSEVFLSSRGTKLTTVRIWQIV 244 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + AG +PH+LRH+ L GAD R+IQ+ LGH +I T YT + R Sbjct: 245 KACAKNAGLDINVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQIYTHVDQQRLK 304 Query: 181 GLWERNNLINE 191 + R + + Sbjct: 305 AVHHRFHPRAK 315 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 2/196 (1%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + +LT ++ + + R+ ++ Y G+R+SE+ L +LDLNE + Sbjct: 125 TIPEFLTFDQMMTLFDSFDLNDPAALRNRAILETMYACGLRVSEVCSLTLAELDLNERIL 184 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P R + R+ ++ + +F+S+RG+ ++ + I+ Sbjct: 185 TVTG-KGDKQRIVPFYKRLRTLLTRYLRDSRALYLKEEHGFVFVSQRGAPITPRAVQLIL 243 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 AG +AG HPH+LRH+ L + G D R +Q+ LGH ++ T YT R Sbjct: 244 AQAGQDAGLNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYTHVTVDRLK 303 Query: 181 GLWERNNLINEKLKRE 196 + + ++ + ++ Sbjct: 304 QSVDAAHPHSKSVLKK 319 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 13/202 (6%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L G E+ +++A G RD ++ Y G+R+SEL+ ++ +DLDL+EG + Sbjct: 108 KLPHFLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDLDLDEGVV 167 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA-----------NWKGADRTDAIFISRRGS 109 IR K + PL A+++W R + A +F ++ G Sbjct: 168 RIRG-KGSKERLAPLGSFALRAIKKWLAHRKLASISVSSTRKSASKAGHGTPVFTNKFGK 226 Query: 110 RLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTV 169 RL+ + R++ G +T PH LRH L +RGAD R +Q+ LGH+++ T Sbjct: 227 RLTTRSVARMLEKYLKLTGLDLRTTPHTLRHTFATHLLDRGADIRSVQELLGHKSLVTTQ 286 Query: 170 RYTASNAARFAGLWERNNLINE 191 YT + A ++ER + Sbjct: 287 IYTHVSTAALKAVYERAHPRAR 308 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 4/190 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 LT +E ++ A G RD ++ L Y GMR+SEL+ + D+++ G + Sbjct: 116 KTPEILTLEETVQLLNQPELDSAKGIRDKAMLELLYATGMRVSELISMKLTDVNMAMGYV 175 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 R V P + +A++R+ +E R+ ++ +F++ G +SRQ ++I Sbjct: 176 LCRDS--DKERVIPFGTEAEKALKRYLEESRSVLLKGKESEFLFVNCSGKSMSRQGFWKI 233 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ +AG PH LRH+ G L + GAD R +Q+ +GH +I T Y N R Sbjct: 234 IKFYSAQAGITKDITPHTLRHSFGAHLVQNGADLRAVQEMMGHSDISTTQIYMDMNVRRV 293 Query: 180 AGLWERNNLI 189 ++ + + Sbjct: 294 REIYAKAHPR 303 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 4/196 (2%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT +E + +++A G RD ++ L Y G+R+SEL+ L+ D++L + Sbjct: 106 KPPQTLTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSELISLNKDDVNLELHFL 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWK--GADRTDAIFISRRGSRLSRQQAYR 118 + + P E ++ + +E + A+F +RRG R+SRQ ++ Sbjct: 166 RCTGERG-KERILPFGGVTAEWLDLYLREGRSHLILDERENPALFPNRRGGRISRQGFWK 224 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ G EAG + PH LRH+ L ERGAD R +Q+ LGH + Y + + + Sbjct: 225 LMKKYGQEAGITSDITPHTLRHSFAVHLLERGADVRSVQELLGHSDASTIQMYVSRSRSN 284 Query: 179 FAGLWERNNLINEKLK 194 +++ + + Sbjct: 285 LKTVYDAFHPRTMRES 300 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 2/193 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + + T +EV+ ++ G R+ ++ Y G+RISEL + QD+DL G Sbjct: 107 VPLPKCFTEEEVRTLLSIPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDIDLKRGL 166 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K + PL EA+ + + R + + D +F+++ G +Q I Sbjct: 167 VRVTG-KGNKQRIVPLGSYAIEAINNYLKVRPQFMRENSPDLLFLTKSGKAFDTKQLDII 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ PH LRH+ L RGAD R IQ+ LGH + T YT + Sbjct: 226 LKRYFELVAKAKGYSPHSLRHSFATHLLSRGADLRAIQELLGHSLLSTTETYTHISLEDI 285 Query: 180 AGLWERNNLINEK 192 +++ + +++ Sbjct: 286 KEAYKKGHPRSKE 298 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 5/197 (2%) Query: 2 SKRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT EV +++ TG R+ L+ L Y G+RI E+ L DLDL +G + Sbjct: 103 TLPEVLTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDLTQGYV 162 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + PL ++++ + + R + +++ +F++++G+ L+ + + Sbjct: 163 RVTG-KGRRQRIVPLGKYALDSLKLYLEAGRPAF--KPKSEKLFLNQQGAGLTVRGIRYL 219 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I +AG + PH RH+ L E GAD R +Q+ LGH+ + T YT + R Sbjct: 220 ISQIVKKAGLNRKITPHTFRHSYATHLLEGGADIRAVQELLGHKRLSTTEIYTHLSKERL 279 Query: 180 AGLWERNNLINEKLKRE 196 ++ R + + + K + Sbjct: 280 REVYLRTHPRSREEKND 296 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 3/188 (1%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ +V+A++ A A G RD ++ L Y G+R+SEL+ L ++ LN+G + + Sbjct: 154 PATLSEAQVEALLAAPEVGTALGLRDRTMLELMYASGLRVSELVMLKTVEVGLNDGVVRV 213 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + P +ER+ +E R GA +DA+F++ RG ++RQQ + II+ Sbjct: 214 MG-KGSKERLVPFGEVAHGWIERYLREARPALLGARTSDALFVTARGEGMTRQQFWNIIK 272 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + A PH LRHA L GAD R++Q LGH +I T YT R Sbjct: 273 RHAMRAEIRAHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARERLRT 332 Query: 182 LWERNNLI 189 L ++ Sbjct: 333 LHAAHHPR 340 >UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteria RepID=XERC_ALCBS Length = 307 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 3/197 (1%) Query: 3 KRRYLTGKEVQAMMQA--VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L +V ++ A RD ++ L Y G+R++ELL L+ +DL+E ++ Sbjct: 111 LPKALDVDQVSHLLDAGTSNSEPLALRDQAIMELLYACGLRLAELLSLNLDSIDLHESQL 170 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ AV RW Q R + +A+FIS+ G RLS + + Sbjct: 171 LVTG-KGNKTRQLPVGKPALTAVRRWLQVRPMLIKSSDQNALFISKNGRRLSPSSVQQRL 229 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + +E G HPH LRH+ L E D R +Q+ LGH ++ T YT + A Sbjct: 230 KRHALERGLDAHLHPHKLRHSFATHLLESSGDLRAVQELLGHADLATTQVYTHLDFQHLA 289 Query: 181 GLWERNNLINEKLKREE 197 +++ + ++ K ++ Sbjct: 290 QVYDGAHPRAQRRKDDD 306 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 6/192 (3%) Query: 3 KRRYLTGKEVQAMMQAV----CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 LT +E+ ++ A RD ++ Y G+R+SELL L +L +++G Sbjct: 113 LPSVLTIEEMATLLDAPLKRHPTSTFMLRDKAMLEFLYATGVRVSELLGLSRLNLHMDDG 172 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAY 117 + + K + P+ ++R+ E R A D IF++ RG LSR A+ Sbjct: 173 FVRVFG-KGSKERLVPVGQTAISWMKRYLDELRPGMMSATSHDTIFLNSRGGPLSRMAAW 231 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I+R+ + AG PH RH+ L E GAD R++Q+ LGH +I T YT + + Sbjct: 232 NIVREHAVIAGIEKPISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQIYTHIDRS 291 Query: 178 RFAGLWERNNLI 189 + + + Sbjct: 292 FIKEVHKTFHPR 303 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 14/193 (7%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG--------ARDYCLILLAYRHGMRISELLDLHYQDL 53 S + LT KEV++++ AV RD ++ Y G+RISEL+ L +D+ Sbjct: 138 SLPKSLTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRISELVKLQKKDI 197 Query: 54 DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 D +E I +R K + + R+ ++ + + +++ +FI++ G +L+ Sbjct: 198 DFDERTIRVRG-KGEKDRIVLFDENTRDLIDNYIET-----QNQKSEYLFINKNGRKLTP 251 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + +I++ +AG + PH+LRH+ L + G D R+IQ LGH ++ T YT Sbjct: 252 RYVQMMIKEYAEKAGIKKKVTPHVLRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQIYTN 311 Query: 174 SNAARFAGLWERN 186 + +++ Sbjct: 312 VDMDTIKSVYDHA 324 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 2/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ E+ +++A G G RD ++ + Y G+R+SE++ L D+D +G + Sbjct: 136 LPKVLSFDEIALLIEAPEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKLADIDRRKGIVM 195 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K G + PL A++ + + RA + T +F+S RG L+RQ ++++ Sbjct: 196 ALG-KGGKRRLVPLGEPALAAIDAYLELRATHPRSAATQVLFLSPRGGPLTRQAVWKLLG 254 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G + PH LRH+ L E GAD R +Q LGH N+ T YT Sbjct: 255 GYARAVGIAKPSSPHKLRHSFATHLLEGGADLRSVQALLGHANVVTTEIYTHLADDHVRA 314 Query: 182 LWERNNLIN 190 + R + Sbjct: 315 AYRRAHPRA 323 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++LT KE++ ++QA G RD ++ L Y G+R+SEL+ L + +I Sbjct: 115 LPQFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSELISLKLESYYPEHFQIK 174 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K P+ +EA++++ E R +F+++RG L+R + ++I Sbjct: 175 VLG-KGNKERAVPIGKCAKEALDKYIAEGRTKLLAKKTRGEVFLNQRGQPLTRSRIRQLI 233 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 G + +PH+LRH L E GAD R+IQ+ LGH NI T YT N Sbjct: 234 IHYARLGGIDKKVYPHLLRHTFASHLVENGADLRVIQELLGHANIATTQIYTHVNLKHLK 293 Query: 181 GLWERNNLIN 190 + R + + Sbjct: 294 EIHRRCHPRS 303 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 R+L+ +V A+++ G R+ ++ + Y G+R+SEL+ L + +DL + Sbjct: 107 LPRFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDLVACFVR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P R+ W + R + + +F++R G+ ++RQ ++++ Sbjct: 167 LFG-KGSRERIVPFGSHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPMTRQGFWKLL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + AG + PH LRH+ L E GAD R +Q LGH +I T YT + Sbjct: 226 KKYALGAGISIKVSPHTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYTHVSRQYLV 285 Query: 181 GLWERNNLI 189 + ++ + Sbjct: 286 DMHKKYHPR 294 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 268 bits (687), Expect = 6e-71, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 12/206 (5%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L +E+ ++ G RD L+ L Y G+R+ EL+ L+ D+D +EG + Sbjct: 150 LPVFLDEEEIGGLLSQPDTHTPLGLRDRALLELLYATGLRVGELVALNRGDIDYSEGWVI 209 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-----RANWKGADRT-----DAIFISRRGSRL 111 + K P+ + +A+ + ++ RA A+++ +F+++ G RL Sbjct: 210 VWG-KGRKERAVPVGSEALQALGHYLRDGWPVLRARAPAAEQSLPEAKQPLFLNKLGGRL 268 Query: 112 SRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 S + R++ + Q PH +RH + GAD R +Q+ LGH ++ T Y Sbjct: 269 SDRSVRRLLDRYVSQLALSRQISPHKIRHTFATHMLNHGADLRAVQEMLGHASLSTTQIY 328 Query: 172 TASNAARFAGLWERNNLINEKLKREE 197 T R + R + + + Sbjct: 329 THVTTQRLRTEYLRAHPRQRRAAPPD 354 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 268 bits (687), Expect = 6e-71, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 3/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S YLT E++ + ++ RD C+ L Y G+RISE +L D+DL + Sbjct: 109 SIPDYLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDMDLEGMTL 168 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K G + P + + R+ ++ R + + +F+S++GS ++R+ +R+ Sbjct: 169 TVEG-KGGRQRLVPFGEKSLDILNRYLKQSRPFILKSRNCEYLFVSKKGSYINRKSVWRL 227 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + + PH LRH+ L E AD + +Q+ LGH +I T YT Sbjct: 228 LNHYIKRTSILKKVTPHTLRHSFATHLLENHADLKSVQELLGHIDIATTQIYTHMANKTL 287 Query: 180 AGLWERNNLI 189 + ++ + Sbjct: 288 REVHKKFHPR 297 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 4/192 (2%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR-- 59 L+ E+ ++++ A R+ L+ L Y G RISE+L L D+ E Sbjct: 169 LPDTLSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDITALEETDG 228 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSR-LSRQQAYR 118 I + K + P+ R+AV+ + ++ A+F++ RG + +SRQ A++ Sbjct: 229 ILVLTGKGDKQRIVPVGSHARQAVDAYLVRGRPQLNKGKSAALFLNVRGGKAMSRQSAWQ 288 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ A EAG PH LRH+ L E GAD R +Q+ LGH ++ T YT A Sbjct: 289 VVKQAATEAGITKDISPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIYTHITADS 348 Query: 179 FAGLWERNNLIN 190 +W + Sbjct: 349 LRAMWRTAHPRA 360 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 3/192 (1%) Query: 1 MSKRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + LT +E+ ++ + R+ ++ L Y GMRISELL + DL+L E Sbjct: 123 VQLPDVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRISELLSISLHDLNLTERV 182 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYR 118 I + K P E ++ ++ R +++ +F++ RG R+SR ++ Sbjct: 183 ILVHG-KGSKQRYVPYVDTLDELFAKYLKQSRPILLKLKQSELLFLNNRGERMSRMGFWK 241 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I+R A +EA + PH RH+ L E G + R++Q LGH +I T YT + R Sbjct: 242 ILRKAVLEANIKKEVTPHTFRHSFATHLLEGGVNLRIVQALLGHSSIDTTQIYTHIDMKR 301 Query: 179 FAGLWERNNLIN 190 ++ + Sbjct: 302 LVETYKEYHPRA 313 >UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacterium hafniense RepID=B8FPN6_DESHD Length = 322 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 26/214 (12%) Query: 3 KRRYLTGKEVQAMM------------------QAVCYGATG------ARDYCLILLAYRH 38 L+ + +M +A + G R+ +I + Y Sbjct: 110 LPHVLSEGSISKLMGEGGDRDKEGPKPGKSSKKAGDSDSEGKDKGLLMRNMAMIEVLYGC 169 Query: 39 GMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGAD 97 G+R+SEL+ L D+ + R K + P+ E ++ + + R +G Sbjct: 170 GLRVSELVGLKVSDIIFETRTLRCRG-KGNKERIVPIGEYALEVLQNYLEHDRERLRGKH 228 Query: 98 RTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQ 157 +T+ +F++ RG+ L+RQ + I++ G +PH RH+ L + GAD R +Q Sbjct: 229 KTEVLFLNSRGTALTRQGIWDILKKWAQTHGVQENIYPHKFRHSFATHLLDHGADLRSVQ 288 Query: 158 DYLGHRNIRHTVRYTASNAARFAGLWERNNLINE 191 + LGH +I T YT + R ++ + + + Sbjct: 289 EMLGHADIATTQIYTHLSRQRLLEVFRKAHPRAD 322 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 7/192 (3%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L+ +E+ +++ GARD ++ L Y G+R+SEL DL+ QD+D + Sbjct: 112 KLPHFLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDIDAGSSLL 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K + PL EA ++ + R D+ +A+ ++ +G+RLS + RI+ Sbjct: 172 RVRG-KGNKERIVPLTNYALEAARQYLEMRE-----DKQEALLLNYQGTRLSVRSIRRIL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +EAG HPHMLRH+ L + GAD R +Q+ LGH + T YT R Sbjct: 226 DGLALEAGLSQHLHPHMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLTKERLR 285 Query: 181 GLWERNNLINEK 192 ++E+N+ +K Sbjct: 286 EVYEQNHPRAKK 297 >UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobacteraceae RepID=B8FH24_DESAA Length = 315 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 3/190 (1%) Query: 6 YLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRR 64 +LT E A++ ++ GARD + Y G+R+SEL L+ ++ + + + Sbjct: 127 HLTVDEAFALLDSILDDSLAGARDRAMFECLYSTGIRVSELAGLNMGRVNFSGKTLRVLG 186 Query: 65 LKNGFSTVHPLRFDEREAVERWTQERA-NWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + P+ E ++ + A +A+F+++ G RL+ + RI+ Sbjct: 187 -KGDKERIVPVGAKALEHIKAYRDRLAVEGPKNPDPEAVFLNKNGGRLTTRSIRRILEKI 245 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 + G PH LRH + + GAD R +Q+ LGH +I T RYT + R + Sbjct: 246 VRDMGLNRPLSPHGLRHTFATHMLDNGADLRSVQELLGHASISTTGRYTHVSIDRLMAAY 305 Query: 184 ERNNLINEKL 193 ++ + EK Sbjct: 306 DKAHPRGEKS 315 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 2/196 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L + + RD L+ L Y G+R++E+ L+ D+D + + Sbjct: 113 KLPKTLDVDQTAQFVAVEGDDFIHKRDRALLELIYSSGLRLAEVTSLNLGDIDWGDAMVT 172 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ A++ W +R + A A+FI++RG R+S + ++ Sbjct: 173 VTG-KGSKTRTLPVGSVAIAALKDWLSQREQYAPAS-EPALFITQRGKRISHRAVQLRLQ 230 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 ++ G HPHMLRH+ + E D RL+Q+ LGH NI T YT + A Sbjct: 231 QLSVQQGMDNPVHPHMLRHSFASHMLESSGDLRLVQELLGHANISTTQIYTHLDFQHLAK 290 Query: 182 LWERNNLINEKLKREE 197 ++++ + + K + Sbjct: 291 VYDKAHPRAGRKKSSD 306 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 266 bits (682), Expect = 2e-70, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 5/196 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L E +++ G RD L+ L Y G+R+SEL L ++DLDL+ G + Sbjct: 132 KLPQVLDADEAVRLVEVPTDAPLGLRDRALLELFYSSGLRLSELCALRWRDLDLDSGLVT 191 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K G + P+ A+ W G +F R G +S++ I+ Sbjct: 192 VLG-KGGKQRLVPVGSHAVAALRAW----QRDSGGSAQTHVFPGRAGGAISQRAVQIRIK 246 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G HPHMLRH+ + E D R +Q+ LGH +I T YT + A Sbjct: 247 QLAVRQGMFKHVHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQHLAK 306 Query: 182 LWERNNLINEKLKREE 197 +++ + ++ K E Sbjct: 307 VYDAAHPRAKRKKATE 322 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 4/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ E++ ++ A+ G R+ ++ Y G+R+SEL DL +L ++G + Sbjct: 109 KLPDTLSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCGLRVSELTDLKISNLFFDDGFV 168 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG--ADRTDAIFISRRGSRLSRQQAYR 118 + K + P+ D R+ + + E + +F++RRG++LSR + Sbjct: 169 KVLG-KGNKERLVPIGRDARKYIGMYRNEVRCHLDIVKGAENYVFLNRRGNKLSRVMVFT 227 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 II++ ++ G PH RH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 228 IIKNLAVKIGLKKTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDY 287 Query: 179 FAGLWERNNLIN 190 + + + + Sbjct: 288 LQQIIKDFHPRS 299 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +E++ ++ + G R+ ++ Y G+R+SE+ +L L + G I Sbjct: 126 QLPDVLSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQISQLHFDAGFI 185 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRGSRLSRQQAYR 118 + K + P+ D + + + E + D +F++RRGS L+R + Sbjct: 186 RVVG-KGDKERLVPIGSDAVKYINIYKDEVRVHVPVKKGQEDILFLNRRGSALTRVMIFL 244 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +I++ AG Q PH RH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 245 VIKELTAAAGIDKQVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTHLDREY 304 Query: 179 FAGLWERNNLI 189 +R + Sbjct: 305 LRDTLQRFHPR 315 >UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJP7_MOOTA Length = 313 Score = 265 bits (680), Expect = 4e-70, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 5/196 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ E++ ++ G RD ++ Y G+R++EL+ + DLDL G + Sbjct: 114 LPGCLSHAEMEKLLSIPATTPLGLRDRAILETLYASGIRVAELVGMDQDDLDLVAGYARV 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWT-QERANWKG---ADRTDAIFISRRGSRLSRQQAYR 118 K V PL +A+E + + R A+F++ G RL+ + Sbjct: 174 LG-KGRRERVVPLGRYAVKALENYLHRARPELAARRIPPEPRALFLNHLGGRLTTRGVRE 232 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 + +A PH +RH L E GAD R++Q+ LGH + T YT + ++ Sbjct: 233 RLSHYVEKAALRRGVSPHTIRHTFATHLLEGGADLRVVQELLGHIRLATTQIYTHISQSQ 292 Query: 179 FAGLWERNNLINEKLK 194 ++ + + + Sbjct: 293 LREVYRQFHPRASRDN 308 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 265 bits (680), Expect = 4e-70, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 3/191 (1%) Query: 1 MSKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + + L+ +V+A++ A G RD ++ L Y G+R++EL+ L ++ +NEG Sbjct: 119 LRIPKTLSEAQVEALLAAPDVTTPLGLRDRTMLELMYASGLRVTELVLLKSIEVGMNEGV 178 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYR 118 + I K G + + P + R +ER+ +E R DA+F++ RG+ ++RQ + Sbjct: 179 LRITG-KGGKTRLVPFGEEARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWT 237 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +I+ A PH LRHA L GAD R++Q LGH +I T YT R Sbjct: 238 LIKKHAAAAEINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARER 297 Query: 179 FAGLWERNNLI 189 L + ++ Sbjct: 298 LKHLHQIHHPR 308 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 3/193 (1%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L EV+ ++ + G RD + Y GMRISEL+ L D+D++ + Sbjct: 104 KLPVFLNFDEVEKLINSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMDMHREIM 163 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQER-ANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K P+ E ++ + R + +F+SR G +L R+ + I Sbjct: 164 KVTG-KGSKQRFVPMYGSLAEKMKTYLDIRHDSLVKERDEGWLFLSRNGKKLDREYVWMI 222 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ AG PH LRH+ L GAD R IQ LGH ++ T RYT + Sbjct: 223 IKKYCERAGIKKNVSPHTLRHSFATHLLTNGADLRTIQVLLGHVDLSTTERYTQVTDNKA 282 Query: 180 AGLWERNNLINEK 192 + K Sbjct: 283 RNTLLNCHPRFRK 295 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 7/194 (3%) Query: 4 RRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ E+ ++ G RD ++ L Y G+R+SEL ++ +D+D ++G I I Sbjct: 115 PAVLSVDEIFVLLNLPFPEDVFGLRDRAILELFYSSGIRVSELTGINEEDMDFSQGLIRI 174 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDA-----IFISRRGSRLSRQQAY 117 R K + P+ EAV+R+ ++ + + + A +F++RR RLS + Sbjct: 175 RG-KGKKERIVPIGQPASEAVQRYMMKKPGSETSGKAVATCPVPLFVNRRQGRLSARSVA 233 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 RI+ +G Q PH LRH+ L + GAD R IQ+ LGH ++ T +YTA + Sbjct: 234 RILSKYVSMSGLQKQISPHTLRHSFATHLMDAGADLRSIQELLGHESLSTTQKYTAVSVN 293 Query: 178 RFAGLWERNNLINE 191 R +++R + Sbjct: 294 RLMAVYDRAHPKAR 307 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 5/200 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 M + E++ + ++ + R+ L+ + Y GMR+SEL +L + LDL+ Sbjct: 106 MLLPEFFYEDEIEKFINSIDGNQSLDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSI 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDA--IFISRRGSRLSRQQA 116 I + K P+ R A+E + +E R + +R + +F++ G L+ Sbjct: 166 ILVIG-KGSKERYVPIGDFARTALETYLEEGRKDLMAKERKEHFFVFVNHLGDPLTTNGV 224 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 I+ E+G + HPHMLRH L GAD R +Q+ LGH ++ T YT Sbjct: 225 RYILEKLIQESGLTLKIHPHMLRHTFATHLLNNGADMRTVQELLGHVSLSSTQIYTHVTK 284 Query: 177 ARFAGLWERNNLINEKLKRE 196 ++ ++ K E Sbjct: 285 EALQQNYQLYFPRSKAGKNE 304 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%) Query: 3 KRRYLTGKEVQAMMQAVCYG----ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 +L + +++A + T ARD ++ L Y G+R+SEL L DLD G Sbjct: 119 LPFHLNIDQTVTLIEAPGHTGQEQPTFARDTAILELLYSSGLRVSELTGLAVADLDRAAG 178 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR 118 + ++ K G + P+ EA+E++ R +F+ RG+R++R+ + Sbjct: 179 MVRVQG-KGGKERIVPVGSAALEALEQYLAGRGQLA---DDAPLFLGCRGARINRRTVAQ 234 Query: 119 IIRDAGIEAGTV--TQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 +++ +G PH LRH + E GAD R IQ+ LGH ++ T +YT Sbjct: 235 LVKRWA--SGIPAFRSISPHTLRHTFATHMLEGGADLRSIQELLGHSSLSTTQKYTHVGL 292 Query: 177 ARFAGLWERNNLINEKLKREE 197 R ++++ + + ++ Sbjct: 293 DRLLEVYDKAHPRARETDQQN 313 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 265 bits (679), Expect = 6e-70, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 2/194 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +E+ ++ + A +R+ C++ L Y GMRISELL+L +DL++ G I Sbjct: 108 KLPIILSQEEMIEILDGIIVCDAISSRNRCMVELLYATGMRISELLNLTLKDLNIKMGFI 167 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ E +E++ + +F ++ G RLSR++ Y I+ Sbjct: 168 KVIG-KGNKERMIPIGSYVGEILEQYINDYRAEFNIKNDSLLFFNKHGQRLSREEFYSIL 226 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + PH RH L E GAD R IQ+ LGH +I T YT + + Sbjct: 227 QTIVNSTSITKKVSPHTFRHTFATHLLENGADLRSIQELLGHSDISTTTIYTHISNQKIR 286 Query: 181 GLWERNNLINEKLK 194 +++ + +K Sbjct: 287 SEYQQFHPRIKKHN 300 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 9/195 (4%) Query: 4 RRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + L+ EV ++ +V + RD L+ Y G RISE L DLD+ + + Sbjct: 109 PKALSEDEVARILASVTGVDSFALRDRALLEFLYATGARISEACGLSLSDLDMESQLVRL 168 Query: 63 RRLKNGFSTVHPLRFDEREAVERWT-------QERANWKGADRTDAIFISRRGSRLSRQQ 115 K + P + A+E W W D DA+F+ RG+RLSRQ Sbjct: 169 FG-KGSKERIVPFGSHAKAALEEWLGAGGRTMLVSEQWAKRDHADAVFLGSRGTRLSRQA 227 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A+RI++ A + PH+LRH+C + GAD R++Q+ LGH ++ T YT + Sbjct: 228 AWRIVQKFAQIAEVGDEVSPHVLRHSCATHMLIHGADLRIVQELLGHASVSTTQVYTRVD 287 Query: 176 AARFAGLWERNNLIN 190 +++ ++ Sbjct: 288 NEVLFDMYKESHPRA 302 >UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteria RepID=XERD_HAEIN Length = 297 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 4/190 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +YLT ++V ++ RD ++ L Y G+R++EL+ L +++ + +G + Sbjct: 108 LPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTELVSLTIENMSVQQGVVR 167 Query: 62 IRRLKNGFSTVHPLRFDEREAVERW-TQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ + V ++ R +D +F S+R +++RQ + + Sbjct: 168 VIG-KGNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVVFPSQRAQQMTRQTFWHRV 226 Query: 121 RDAGIEAGTVTQ-THPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + I A PH+LRHA L GAD R++Q LGH ++ T YT R Sbjct: 227 KHYAILADIDADALSPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKERL 286 Query: 180 AGLWERNNLI 189 L ER + Sbjct: 287 KRLHERFHPR 296 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 5/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +LT E+Q ++ RD +I L Y G+RI EL+ L +++D + Sbjct: 128 KVPSFLTENEMQMLLNLPDLKP---RDRAMIELFYSCGLRIEELVSLDLKNIDFISNVVT 184 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANW-KGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ A++ + +R N D +F+S R RL ++ A RI+ Sbjct: 185 VTG-KRNKERIVPVGDICLHAIKDYINKRRNLGLPYDIRSPVFLSDRAKRLGQRTARRIL 243 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++AG + PH LRH + +RG D R +Q+ LGH+N+ T YT Sbjct: 244 HRYFVKAGFTKKVSPHTLRHTFATHILDRGCDLRSVQEMLGHKNLSSTQIYTHVTIESLK 303 Query: 181 GLWERNNLINE 191 +++ + + Sbjct: 304 KVYKETHPRAK 314 >UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S4_9FIRM Length = 302 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L E+ +++ G RD L+ Y G R+SEL+ L LDL+ Sbjct: 110 KLPVFLEEFEMNHLLELPDLSTELGQRDRALLEFLYSTGCRVSELVGLTLTRLDLSNRYA 169 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGA---DRTDAIFISRRGSRLSRQQA 116 + K + PL A+ + R D IF++ RG+ L+ + Sbjct: 170 LLLG-KGHKERIVPLGHPCIRAMNAYLTGARRVLMEKYEVPSHDFIFVNHRGTPLTARSV 228 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 RI+ A PH +RH L + GAD R +Q+ LGH ++ T YT A Sbjct: 229 RRILDRYVEMASIQKHVSPHTIRHTFATHLLDHGADLRSVQELLGHASLSTTQIYTHVTA 288 Query: 177 ARFAGLWERNNLIN 190 R A ++++++ Sbjct: 289 DRIASVYKKHHPRA 302 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 5/188 (2%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ +E+ ++ GARD ++ Y G+R+SEL L D+D + + + Sbjct: 108 PDVLSLEEIDRILAIPNIQTWRGARDKAILETLYACGLRVSELCQLKIYDVD--DTFVRV 165 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K G + P+ A++ + R R + +FI+++ L+R +++++ Sbjct: 166 LG-KGGKERIVPIGQQAIAAIDGYLSFREG-GENSRNEFLFITKKSKPLTRALVWKLVKF 223 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +A PH RH L + GAD R+IQD LGH +I T RYT + R Sbjct: 224 YARQASIFKSISPHTFRHTFATHLLDHGADLRVIQDMLGHASINSTDRYTHVSQIRLQQA 283 Query: 183 WERNNLIN 190 ++ + N Sbjct: 284 FQAFHPRN 291 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%) Query: 2 SKRRYLTGKEVQAMMQAVC--------YGATGARDYCLILLAYRHGMRISELLDLHYQDL 53 S + L EV++++ AV RD ++ L Y G+R+SEL+ L D+ Sbjct: 122 SLPKSLNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRVSELVSLRINDI 181 Query: 54 DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 D +E I IR K + + R+ + + + R ++ +F++R G L+ Sbjct: 182 DPDERTIRIRG-KGDKDRIVLFDENTRDLLMDYLKRR-----IHESEYLFLNRFGDPLTP 235 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + +I++ +AG + PH+LRH+ L + G D R IQ LGH N+ T YT+ Sbjct: 236 RYVQMMIKNYARKAGIKKKVTPHILRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQIYTS 295 Query: 174 SNAARFAGLWERN 186 + +++R Sbjct: 296 VDMQTLKNVYDRA 308 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 3/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+G+EV+A++ + GA RD ++ L Y G+R+SEL+ L +++L+ G + Sbjct: 103 KLPAVLSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKLSEVNLSAGYL 162 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + P+ A + Q+ R + +F+SR G +SRQ + I Sbjct: 163 MTIG-KGDKERLVPMGESACHATGVYLQQARGELLKEKASTLLFLSRLGGGMSRQAFWNI 221 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ ++AG T PH LRH+ L E GAD R +Q LGH ++ T YT R Sbjct: 222 IKKRALQAGVRTSISPHTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYTHVTRERM 281 Query: 180 AGLWERNNLI 189 L + Sbjct: 282 KKLHADFHPR 291 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 4/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +EV ++ A G RD L+ Y G R+SE DL L L++G + Sbjct: 112 KLPELLSREEVVRLIAAPGVDTPLGLRDTALLEFMYATGCRVSEACDLELSSLHLDQGLV 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANW-KGADRTDAIFISRRGSRLSRQQAYR 118 + K + PL A+ W +E R A R +F+++RGSRLSRQ + Sbjct: 172 -VLTGKGSKQRMVPLGDCALVALLAWLEEGRPELVARAPREAHVFVNKRGSRLSRQGCFF 230 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +R + AG PH LRH+ L E GAD R +Q LGH +I T YT + + Sbjct: 231 RLRQHAVSAGITRDISPHKLRHSFATHLIEGGADLRAVQTLLGHADISTTQVYTHLSQSH 290 Query: 179 FAGLWERNNLIN 190 ++ ++ Sbjct: 291 VRHAYDLHHPRA 302 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 4/196 (2%) Query: 4 RRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + L + +++ + G RD L+ + Y G+R+SE L L + +DL++ + + Sbjct: 117 PKVLNVDQAIHLVETEITLDPEGLRDLALLEVLYGSGLRVSEALGLDFAHVDLDQKLVRV 176 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + PL E + R+ ++R + A R A+F+ +RG RLSR+QA RI+++ Sbjct: 177 LG-KGRKERLVPLTGPAAERLARYIEQRGAFAPAAREQAVFLGKRGGRLSRKQADRIVKE 235 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 + +G PH LRH+ + + GAD R +Q+ LGH I T RYT + A+ + Sbjct: 236 MAVRSGAPCSISPHTLRHSFASHMLQAGADLRSVQELLGHSRISTTQRYTHLDLAQVMRV 295 Query: 183 WERNNLINEKLKREEV 198 ++ + + K++E+ Sbjct: 296 YDAAHPLA--AKKDEI 309 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 5/190 (2%) Query: 3 KRRYLTGKEVQAMMQ--AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ EV+ ++ A R++ ++ L Y GMR+SEL+ L ++ G + Sbjct: 168 LPKVLSSAEVEQLLAPPAPPASILALRNHAMLHLLYATGMRVSELVKLPVAAVN-QAGHL 226 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 I K + P R+A+ + Q R R+D +F++ RG+ ++R + ++I Sbjct: 227 RILG-KGSKERLVPFGEAARQAMAVYITQARPRLLKKRRSDFLFVTGRGTAMTRLRFWQI 285 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R + E G + PH+LRH+ L E GAD R +Q LGH +I T YT + R Sbjct: 286 VRKSARERGIAREISPHVLRHSFATHLLEHGADLRAVQVMLGHADIATTQIYTHVDTNRL 345 Query: 180 AGLWERNNLI 189 + + + Sbjct: 346 KAIHRKFHPR 355 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 5/191 (2%) Query: 4 RRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 L+ EV+A + AV + RD L+ + Y G R SE+ L +DL L+E + Sbjct: 136 PGVLSPNEVEAFLSAVKKSDSFWQRDRALLEVLYATGCRASEVCTLRVRDLTLDEKTLRC 195 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRT---DAIFISRRGSRLSRQQAYRI 119 K + P+ A++ + +E + D +F+SR G L R Q +R+ Sbjct: 196 HG-KGDKQRMVPIGGRAIRAIQLYLEESRHILADRNPGQIDELFLSRGGKALDRIQLWRL 254 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ AG + PH LRH+ L GAD R +Q+ LGH +I+ T YT +R Sbjct: 255 VKRYAKRAGISDEISPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIYTHVEHSRL 314 Query: 180 AGLWERNNLIN 190 + + Sbjct: 315 QRVHRDFHPRA 325 >UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes RepID=D2RKK7_ACIFE Length = 311 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L E+ +++ G RD ++ Y G R+SEL+ L +DL Sbjct: 119 KLPVFLEEFEINLLLRMPDCTTVLGRRDRAILEFLYSTGCRVSELVGLTLTRVDLGNRYA 178 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERA----NWKGADRTDAIFISRRGSRLSRQQA 116 + K + PL A+E + + A R +F++ RG LS + Sbjct: 179 ILLG-KGRKERLVPLGHPCVAAMEDYLRHSRGTLMEKYQAPRHQTVFVNSRGRPLSARSV 237 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 RI+ PH +RH L + GAD R +Q+ LGH ++ T YT A Sbjct: 238 RRILDKYVEMTALQKHVSPHTIRHTFATHLLDHGADLRAVQELLGHVSLSTTQIYTHVTA 297 Query: 177 ARFAGLWERNNLIN 190 R ++E+++ Sbjct: 298 ERLTAVYEKHHPRA 311 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 2/189 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT +E+ ++ R ++ L Y G+R+SEL+ L + ++L + + Sbjct: 103 KIPETLTKEEISRLLSFPPKTFAEIRTLTILELFYACGLRVSELVSLRIESVNLKDKWVL 162 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRT-DAIFISRRGSRLSRQQAYRII 120 K P+ + +E + ER + + IFI++ G ++SR ++ + Sbjct: 163 AYG-KGAKQRFIPIHDRAVKVLEIYLSEREKYLKGKESASEIFINKNGKKISRMSVWKDV 221 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 D G AG HPH+ RH L GAD R +Q+ LGH +++ T YT + Sbjct: 222 NDLGRLAGIERSLHPHLFRHTFATHLLIGGADLRSLQEMLGHADLQTTQIYTHLDVQSLK 281 Query: 181 GLWERNNLI 189 ++ + Sbjct: 282 EKHKKFHPR 290 >UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus capsulatus RepID=Q60AJ2_METCA Length = 304 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 1/192 (0%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R L V ++ A RD + L Y G+R+SEL+ L D+D G + + Sbjct: 110 LPRLLDVDAVAGLLDAPADDRLETRDRAMWELFYSSGLRLSELVGLDVVDVDFGAGSVFV 169 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R+ K G + P+ EA+ W + R GA + A+F+SR+G R++ + + Sbjct: 170 RKGKGGKARYVPVGAKALEAIGAWLEARRVLTGAGQ-PALFLSRQGRRIAPRTVEMRLER 228 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 + G + HPHMLRH+ + E D R +Q+ LGH + T YT + R A + Sbjct: 229 WRAKLGLSERVHPHMLRHSFASHMLEASGDLRAVQELLGHATLATTQIYTHVDFQRLAAV 288 Query: 183 WERNNLINEKLK 194 +++++ + + Sbjct: 289 YDQSHPRARRDR 300 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 262 bits (672), Expect = 3e-69, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 6/193 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG----ARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 S + L+ EV A++++ RD L+ + Y G R+SELL L D+D E Sbjct: 112 SIPKALSIAEVTAILESCPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVDPTE 171 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 I +R K V P+ +A++ + + A+F++R G R+ RQ A+ Sbjct: 172 KLIIVRG-KGSKERVVPVGDPALDALQHYLVRVRPAFNKKGSAALFLNRNGGRMGRQSAF 230 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 ++ +AG PH RH+ L E GAD R++Q+ LGH N+ T YT + Sbjct: 231 NMVSSVSEKAGVAG-VSPHSFRHSFATHLLEGGADIRVVQELLGHSNVVTTQIYTKVSPD 289 Query: 178 RFAGLWERNNLIN 190 W ++ + Sbjct: 290 HLREAWSESHPRS 302 >UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY7_9ZZZZ Length = 298 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 LT +E+ ++ + RD + + Y G+R++EL D D+ + I Sbjct: 107 KLPNVLTIQEIDKILGIIPENAPMAQRDLAIFEMMYSCGLRVTELCDFKTSDILWDSEMI 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDA-IFISRRGSRLSRQQAYR 118 ++ K P+ RE ++ + ER + A +F+SR G +L+R + Sbjct: 167 RVQG-KGSKQRFVPIGPIARENLKNYLNHERNTLADKNPNVAEVFLSRNGRKLTRMMIWV 225 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ A + PH LRH+ L E GAD R +Q+ LGH +I T YT + Sbjct: 226 LLKKWTESAEVKKEVSPHTLRHSFATHLLEGGADLRSVQEMLGHTDITTTQVYTHLDKEH 285 Query: 179 FAGLWERNNLI 189 + + Sbjct: 286 LKEVHRTYHPR 296 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 6/192 (3%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + + L A++ A RD + L Y G+R+SEL L DLDL EG Sbjct: 124 TLPKALPVDATSALLDAPIDPEDDLALRDQAMFELLYSCGLRLSELTGLDLADLDLGEGL 183 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + + P+ R+A+ERW R + G A+F + G RLS +Q + Sbjct: 184 LTAHG-KGNKTRILPIGRQARQALERWLAIRPSQPG---EGAVFTGKSGRRLSGRQVEKR 239 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + G+ HPHMLRH+ L + D R +Q+ LGH N+ T YT+ + Sbjct: 240 LEQWAQRHGSDRHVHPHMLRHSFASHLLQSSGDLRAVQELLGHANLSTTQIYTSLDFQHL 299 Query: 180 AGLWERNNLINE 191 A +++ + + Sbjct: 300 AKVYDATHPRAK 311 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ +V ++ RD ++ L Y G+R+SEL+ L + + L +G + Sbjct: 112 LPDSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVR 171 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 I K G + P+ VE + R G ++D +F S+R ++RQ + I Sbjct: 172 IIG-KGGKERLVPMGEMAITEVEHYLTSARHELLGHIQSDVVFPSKRSQMMTRQTFWHRI 230 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + AG T+ PH LRHA L GAD R++Q LGH ++ T YT AR Sbjct: 231 KLYASRAGIETELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQ 290 Query: 181 GLWERNNLI 189 L ++++ Sbjct: 291 ELHQQHHPR 299 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 5/191 (2%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++LT +E ++ A G ARD L L Y G+R SE+ L +D+DLN G + Sbjct: 109 LPKFLTQEETDRLIDTAANQGKLPARDKALFELIYSSGLRRSEVTGLSIKDIDLNLGVVR 168 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ EA++ + R + + D +F++R G RL+ +++ Sbjct: 169 VMG-KGSKERLVPITDLAIEALKEYLSTRGVY---NSGDPLFLNRLGGRLTGDGLAYLVK 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + I+A + H LRH+ + G D R +Q+ LGH+++ T YT + R Sbjct: 225 NITIKANLARKVTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHVSLDRLKK 284 Query: 182 LWERNNLINEK 192 ++ + + +++ Sbjct: 285 IYGQTHPRSKE 295 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 262 bits (671), Expect = 4e-69, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 5/194 (2%) Query: 3 KRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +E++A++ A + RD L+ Y G RISE ++L D+D Sbjct: 124 LPETLSLEEMEALLAAASSPGDSNSLRDRALLEFLYASGARISEAMNLVLDDIDFETEPA 183 Query: 61 NIR-RLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRT-DAIFISRRGSRLSRQQAY 117 +R K + L +A++ + + R ++ +F++ G +SRQ A+ Sbjct: 184 LVRLFGKGRKERISMLGHQACQALQAYLVRVRPTLAEKGQSRGRVFLNTYGKPMSRQTAW 243 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 II+ A A HPH LRH L + GAD R++Q+ LGH ++ T YT + Sbjct: 244 AIIQAAAKRAQIDRPVHPHTLRHCFATHLLQGGADIRVVQELLGHASVTTTEIYTKVSKQ 303 Query: 178 RFAGLWERNNLINE 191 ++ + Sbjct: 304 MLLEVYASAHPRAR 317 >UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBK4_9FIRM Length = 311 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 2/194 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 Y ++++ ++ + D ++ L Y G+R+SE L Q + L +G + + Sbjct: 120 LPVYFNMQDIERLLDSFRDSDAEIMDKAIVELLYGCGLRVSECCSLMLQQVYLEQGFLRV 179 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + P+ ++A+E + + + A ++ +FI+ +G ++RQ + +I+ Sbjct: 180 IG-KGNKERMVPMHARCKKALENYLTKVRKQRYAR-SNFVFINAKGQEITRQYIHVMIKK 237 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 + G + H RH+ L + GAD R++Q+ LGH +I T YT R + Sbjct: 238 RLLALGLDERLSAHSFRHSFASHLLDGGADLRVVQELLGHSDISTTQIYTHVQNKRLQSV 297 Query: 183 WERNNLINEKLKRE 196 + + +K K + Sbjct: 298 YTSFHPRAKKHKED 311 >UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobacteria RepID=XERC_MYXXD Length = 300 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + + L +EV A++ G RD ++ L Y G+RISEL L D+D + + Sbjct: 108 TLPKVLPVEEVFAILDMPDVKTVLGLRDRAILELLYGGGLRISELCGLDLLDIDRSGRIV 167 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWK----GADRTDAIFISRRGSRLSRQQA 116 + K + P+ A+E + R +A+F++ RG RL+ + Sbjct: 168 RVMG-KGSKERLVPVNAQSIRALEAYLARRGELLATIRKDQAPEAMFLNFRGGRLTPRSI 226 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 R + ++ + PH +RH+ L GAD R IQ+ LGH ++ T RYT Sbjct: 227 ARHLDTYVLKCALTRKVSPHAMRHSFATHLLGGGADIRSIQELLGHSSLSTTQRYTQVTW 286 Query: 177 ARFAGLWERNNLIN 190 + +++ + Sbjct: 287 EQLQQVYDSAHPRA 300 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 6/192 (3%) Query: 3 KRRYLTGKEVQAMMQAVC---YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 +L+ EV A ++A R+ ++ + Y G+R+SEL L +D + Sbjct: 108 LPDFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAVDFDNEL 167 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWK--GADRTDAIFISRRGSRLSRQQAY 117 + + K + + P+ + R+ + R+ +F+S+ G L+R+ + Sbjct: 168 LRVVG-KGSKTRIVPIGKVALRTLRRYLADVRPLLAEKNPRSPYVFLSKSGRPLNREWIW 226 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 +++ A AG HPH LRH+ L GAD R+IQ+ LGH +I T YT ++ Sbjct: 227 NVVKVAAARAGIHKNIHPHTLRHSFASHLLAHGADLRVIQEMLGHADISTTEIYTHIDSN 286 Query: 178 RFAGLWERNNLI 189 R A + + + Sbjct: 287 RLAAIHHKFHPR 298 >UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteobacteria RepID=A0L875_MAGSM Length = 296 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 3/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ E +A++ A G RD ++ L Y G+R+SEL+ L LD G + Sbjct: 107 KLPNTLSEAETEALLYAPDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLDEENGFV 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + P+ E V R+ R R + +F+S RG+ ++R + I Sbjct: 167 RVIG-KGNKERIVPMGEAATEMVIRYRHSARQVLLKGGRCNDLFLSNRGAAMTRHNFWHI 225 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ EA + PH +RHA L GAD R +Q LGH +I T YT AR Sbjct: 226 VKRYAYEANIMKPLSPHGIRHAFATHLLNHGADLRAVQMMLGHADISTTEIYTHVANARL 285 Query: 180 AGLWERNNLI 189 L ++ + Sbjct: 286 KKLHDQLHPR 295 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%) Query: 3 KRRYLTGKEVQAMMQAVC-----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 + LT EV A++++V G R+ L+ L Y G RISE + L D+D Sbjct: 119 LPKSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQA 178 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADR----TDAIFISRRGSRLS 112 + ++ K G + P+ +A++ + + R++ T AIF++ RG RLS Sbjct: 179 RTVLLQG-KGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLS 237 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 RQ A+++++DA AG + PHMLRH+ L E GAD R++Q+ +GH ++ T YT Sbjct: 238 RQSAWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYT 297 Query: 173 ASNAARFAGLWERNNLINE 191 +W + + Sbjct: 298 LVTVQALREVWAGAHPRAK 316 >UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetales RepID=XERC_CORGL Length = 308 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 6/190 (3%) Query: 3 KRRYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L ++ ++ RD ++ L Y GMR++EL + D+D + + Sbjct: 123 LPKILGEQQAGDFVENAASTNEEEFLRDSAILELLYATGMRVAELCGIDLSDIDYDRKMV 182 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K V P +A+ W R + A+F+ RG R++ +Q RI+ Sbjct: 183 RVLG-KGNKERVVPFGESAHKALRNWLDVRDEM--TEDPKALFVGVRGQRINARQVRRIV 239 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 A G PH LRH L + GAD R +Q+ LGH +++ T YT + R Sbjct: 240 DRAAKVTGVD-HLSPHSLRHTAATHLLDGGADLRQVQELLGHSSMQTTQIYTHVSNKRLL 298 Query: 181 GLWERNNLIN 190 + + + Sbjct: 299 EAFNKAHPRA 308 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 4/192 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ ++V+ +++A+ G R+ C+I + Y G+R+SEL+DL +++ E + Sbjct: 111 LPDTLSFEDVERIIKAINISTDLGRRNQCMIEVLYGCGLRVSELIDLKISNINFKELYLK 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRGSRLSRQQAYRI 119 + K S PL + ++ + QE + ++ D +F++ RGS +SR + I Sbjct: 171 VDG-KGDKSRFVPLATYTAKLIKEYIQEIRSKYKINKKCEDVLFLNSRGSAMSRVIVFII 229 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I++ +AG + PH RH+ L + GAD R IQ+ LGH +I T YT Sbjct: 230 IKELTEKAGINKKISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYTHLKNEEL 289 Query: 180 AGLWERNNLINE 191 + + N+ Sbjct: 290 RDVILNFHPRNK 301 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 5/191 (2%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ EV ++ G G RD + L Y G+R SEL+ L D+ EG + Sbjct: 117 LPDVLSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDLGDVFFAEGILR 176 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTD-AIFISRRGSRLSRQQAYRI 119 + K + P+ + + + + R +TD A+ ++ RG RLSRQ + I Sbjct: 177 VMG-KGSRERIVPIGGSAQRVLLDYLENGRPKLAKPSKTDGAVILNARGGRLSRQALHTI 235 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R AG G HPH LRH+ + E GAD R IQ+ LGH +I T Y + + Sbjct: 236 VRTAGATIG-RPDLHPHTLRHSFATHMLEGGADLRTIQEILGHSDISTTQIYVHVDRSHI 294 Query: 180 AGLWERNNLIN 190 + + Sbjct: 295 REEYLAAHPRA 305 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 5/192 (2%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ +V ++ G G R+ C + L Y G+R SEL L D L+EG + Sbjct: 123 LPDVLSIDQVNTLLDQEFREGPLGVRNACALELLYGCGLRASELSGLDAGDAFLDEGILR 182 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRGSRLSRQQAYRI 119 I K + P+ + + ++ + R T A+ ++ RG RLSRQ + I Sbjct: 183 IVG-KGSRERIVPIGGSAARCLASYLEDARPLLRSPRRLTPAVMLNARGGRLSRQSIHSI 241 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +R+AG G HPH LRH+ L E GAD R IQ+ LGH +I T YT + Sbjct: 242 VREAGHVIGI-KDLHPHTLRHSFATHLLEGGADLRAIQEMLGHSDISTTQIYTHVDRTHV 300 Query: 180 AGLWERNNLINE 191 + + + Sbjct: 301 REEYLSAHPRAK 312 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 4/190 (2%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L +E+ ++ ++ G R+ ++ L Y G+R SE+++L ++D N+ + I Sbjct: 114 PDFLFPEEILGLLDSIETKDDLGIRNKAMMELMYASGLRCSEVVNLQLSNIDFNQMVLFI 173 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRGSRLSRQQAYRII 120 K P E + ++ QE + + +F+++ G+ L+ + I+ Sbjct: 174 HG-KGNKDRYVPFHDYAGEWLIKYIQEARENLMIKNEGHNFVFVNKFGNPLTNRGVENIV 232 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + HPH +RH+ L GAD R +Q+ LGH N+ T YT + Sbjct: 233 DRIMRLYDSTKKIHPHTIRHSFATHLLNAGADIRTVQELLGHENLSTTQIYTHISRDHLK 292 Query: 181 GLWERNNLIN 190 ++ + + N Sbjct: 293 EVYLKAHPRN 302 >UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V602_9PROT Length = 317 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 4/193 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDL--DLNEGRI 60 + L+ + M+ RD + L Y G+R+ EL+DL + + D+ G + Sbjct: 126 LPQVLSPDQAVRMVDLPTDAPDSIRDKAMFELFYSSGLRLMELIDLDAESIRSDITAGEV 185 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + PL A+ W R A+F+ RG+R+S + + Sbjct: 186 RVTG-KGHKTRIVPLGGCAISALHEWLAVRPTLANIG-ERALFVGARGARISPRVVQLRM 243 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + GI+ G + HPHMLRH+ + + D R +Q+ LGH +I T YT + + Sbjct: 244 KQWGIKQGITSSVHPHMLRHSFATHVLQSSGDLRAVQEMLGHASISTTQVYTHLDFQYLS 303 Query: 181 GLWERNNLINEKL 193 +++ + ++ Sbjct: 304 KIYDAAHPRAKRK 316 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 4/189 (2%) Query: 5 RYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 + + A++ A G RD + L Y G+R+SEL+ L+ D+D RI +R Sbjct: 120 KVFNIDSIIALLDAPDKDKPAGMRDALIQELMYGTGVRVSELVGLNLSDIDFGGMRILVR 179 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGA--DRTDAIFISRRGSRLSRQQAYRIIR 121 K + P+ E + + + + +AIFI++ GSRL+ + RI+ Sbjct: 180 G-KGKKERIVPIADMHIEMINDYLDVKMDICNGYLPDNEAIFINKFGSRLTDRSVRRIVE 238 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 AG PH RH+ L E GAD R IQ LGH ++ T +YT N Sbjct: 239 KYLKIAGLPMDFSPHSFRHSYATHLLEGGADLRTIQSLLGHESLTTTQKYTHLNLTELLR 298 Query: 182 LWERNNLIN 190 +++ + Sbjct: 299 VYDATHPFA 307 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 2/185 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L E++ ++ + G R+ +I L Y G+R+SE++DL DLDL E + + Sbjct: 106 LPHFLMYDEIETLLLSCDESVLGVRNQVMIELMYACGLRVSEVVDLQIHDLDLTERSLRV 165 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + + R + T+A+F+++RG L+ + I+ Sbjct: 166 IG-KGNKERQLFFYESLVPKLWSYLNLYRPQFPNVSDTEAVFLNQRGKPLTPRGIQHILE 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G AG + HPHMLRH+ L + GA R++Q LGH ++ T YT + + Sbjct: 225 HQGKTAGLRMKLHPHMLRHSFATHLLDNGASLRVVQTLLGHESLSTTQIYTHVSMQKIKE 284 Query: 182 LWERN 186 +++ Sbjct: 285 VYDDA 289 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 2/192 (1%) Query: 3 KRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L+ +EV+ ++ + + ++ L Y G+RISEL L + L G + Sbjct: 107 LPSFLSVEEVKQLLNSFTRDDPKQELNRTILELIYACGLRISELCSLTVAQVQLETGILR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + P+ + ++ + +T+ FI+ G+R++ + +++ Sbjct: 167 ILG-KGNKERIVPIPNQVVKDLDYYLNLIRPIWNQHKTNTFFINHLGNRITARSIQLLLK 225 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +E G PH LRH L + GAD R+IQ+ LGH NI+ T YT + Sbjct: 226 QKAMECGFQKDITPHSLRHTYATHLLQAGADLRIIQELLGHSNIKTTEIYTHVQNRQLFE 285 Query: 182 LWERNNLINEKL 193 ++ + +++K Sbjct: 286 AYQNFHPLSKKK 297 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 3/197 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ +EV + ++ G R+ +I + + G+R+SEL++L +L L+EG I Sbjct: 113 LPEVLSTEEVDMIENSIDLSKPEGQRNKAIIEVLFSCGLRVSELVNLQLSNLYLDEGFIR 172 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWK-GADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ + + W +R K D +F++RRG+ L+R ++ Sbjct: 173 VTG-KGNKERLVPISPKAIKELNLWFLDRNLMKIKPGEQDYVFLNRRGAHLTRTMILIML 231 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + EAG PH LRH+ EL + GAD R IQ LGH +I T YT + Sbjct: 232 KRQAQEAGIQKTISPHTLRHSFATELLKGGADLRAIQVMLGHESIGTTEIYTHIDTTTLR 291 Query: 181 GLWERNNLINEKLKREE 197 ++ N K + +E Sbjct: 292 EEILLHHPRNAKDRPDE 308 >UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia RepID=XERC_NATTJ Length = 299 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L+ +EV+ ++ A G RD ++ + Y G+R+ EL L Q+LDL G + Sbjct: 107 KLPEFLSIEEVEMLINAPGDDPFGLRDKAILEVFYCSGIRLGELWGLDLQNLDLQTGYLK 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRT----DAIFISRRGSRLSRQQA 116 + K + PL A+E + R +++ DA+F+++ G+R+S++ Sbjct: 167 VTG-KGNIERLAPLGSFALAAIEDYLYNARPELLKKNKSVENCDALFLNKFGTRISQRSI 225 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 R ++ + + + PH LRH+ L E GAD R +Q+ LGH NI T YT N Sbjct: 226 RRRVKKYVQQTASEHRVSPHSLRHSFATHLLEGGADLRAVQELLGHVNISTTQIYTHVNQ 285 Query: 177 ARFAGLWERNNLIN 190 AR ++ + + Sbjct: 286 ARMTEVYNKYHPRA 299 >UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobacteria RepID=Q0ACL7_ALHEH Length = 304 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 3/192 (1%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ E +++ + RD L L Y G+R++E + L LDL EG + Sbjct: 110 LPGVLSPDEAARLLEGSPEDDPLALRDRALYELIYSSGLRLAEAVGLDLGRLDLTEGLVE 169 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ REA++ W R GAD A+F+S+RG RLS + + Sbjct: 170 VVG-KGAKTRRVPVGGKAREALQAWLAVRPALAGAD-EPAVFVSQRGGRLSARSVQARLA 227 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +G HPHMLRH+ L E D R +Q+ LGH +I T YT + A Sbjct: 228 RLATLSGVGRPVHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQVYTHLDFQHLAR 287 Query: 182 LWERNNLINEKL 193 ++++ + K Sbjct: 288 VYDQAHPRARKG 299 >UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 Length = 313 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 3/198 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +T +E+ ++ ++ G R+ ++ Y G+R+SEL +L +L EG I Sbjct: 111 KLPEVMTVEEIDLLIGSIDRSTKEGQRNRAILETLYSCGLRVSELCNLKLSELYFEEGFI 170 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR-TDAIFISRRGSRLSRQQAYRI 119 + K + P+ + + + +R K D +FIS G +SR + I Sbjct: 171 KVEG-KGSKQRLVPISPRAIKEIRLYFTDRNLMKIKPGFEDFVFISNFGKNISRIMVFHI 229 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I++ G + PH RH+ L E GA+ R IQ LGH +I T YT + Sbjct: 230 IKELAARIGLKKKISPHTFRHSFATHLLEGGANLRAIQCMLGHESIGTTEIYTHIDRNML 289 Query: 180 AGLWERNNLINEKLKREE 197 ++ N K + ++ Sbjct: 290 RSEIIEHHPRNIKFREKD 307 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 5/191 (2%) Query: 4 RRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 + ++ ++ A RD L+ + Y G R SE+ L D+ L+EG + Sbjct: 102 PSVIAPHKIDDLLTAPWSEDPYWRRDRALLEVLYATGCRASEVSGLRMDDVHLDEGYVKC 161 Query: 63 RRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDA--IFISRRGSRLSRQQAYRI 119 K + PL V+ + +ER + DA +F+SR G RLSR + + Sbjct: 162 EG-KGSKQRIAPLAQKSARVVKTYLDEERPRLSKKNLRDAAFLFLSRSGKRLSRIAIWEL 220 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ AG PH LRH+ L GAD R +Q+ +GH +I T YT + +R Sbjct: 221 VKKYAARAGIDPDVSPHSLRHSFATHLLAGGADLRHVQEMMGHASIATTQIYTHVDQSRL 280 Query: 180 AGLWERNNLIN 190 + + + Sbjct: 281 KKVHAQYHPRA 291 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 6/190 (3%) Query: 3 KRRYLTGKEVQAMM--QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 R L + M A RD ++ L Y GMR+SEL L D+D + + Sbjct: 125 LPRVLGEVQAGEFMGSAAADTEDEFRRDSAILELLYATGMRVSELCGLDLGDVDHHRRMV 184 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P +A+E+W + R DA+F+ RG R+ +Q RI+ Sbjct: 185 RVLG-KGDKERMIPFGKAAADALEQWLEARDRMAKV--EDAMFVGVRGGRIDARQIRRIV 241 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 AG PH LRH L + GAD R +Q+ LGH +++ T YT ++ R Sbjct: 242 DRTAQVAG-ADHLSPHSLRHTAATHLLDGGADLRQVQEMLGHSSLQTTQIYTHVSSQRLL 300 Query: 181 GLWERNNLIN 190 + + + Sbjct: 301 EAFRQAHPRA 310 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 6/196 (3%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +L +E++ + G R+ ++ L Y GMR+SEL L DLDL+ + + Sbjct: 111 PSFLYEEELKELFTVSDVSTPLGQRNQAILELLYATGMRVSELCSLKESDLDLSMDTVLV 170 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD----AIFISRRGSRLSRQQAYR 118 K P EA+ + ++ A D +F+++RG+ L+ + Sbjct: 171 HG-KGSKQRYVPFGSYAHEALITYLEDGRLKLKAKGKDRADAYVFLNQRGAPLTDRGVRF 229 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 I+ + +A HPHMLRH L GAD R +Q+ LGH N+ T YT + Sbjct: 230 ILTELMKKASGTLHIHPHMLRHTFATHLLNEGADLRSVQELLGHSNLSSTQVYTHVSKDS 289 Query: 179 FAGLWERNNLINEKLK 194 + ++ K Sbjct: 290 LRKTYMSHHPRAFKRS 305 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 3/198 (1%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + ++ +E+ + ++ RD L+ + Y GMR+SEL +L + L+L Sbjct: 135 TLPQFFYEQELTQLFDSLYKREDDAAWRDRMLLEVLYATGMRVSELSELSLERLNLEVQL 194 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 I + K + PL +A+ + + + + ++ +G+ +S +Q Sbjct: 195 IRVLG-KGNKERIVPLGDSATQAIRDYLSHLRPKIDRNNSPYLLLTDKGAPMSPRQIRTR 253 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ E + +PH LRH+ L +GAD R +Q+ LGH N+ T YT + Sbjct: 254 LKSLVEEQAMNLKIYPHKLRHSFATHLLNKGADLRTVQELLGHANLSSTQIYTHVTKDQL 313 Query: 180 AGLWERNNLINEKLKREE 197 + + + ++ K+++ Sbjct: 314 RSQYLKAHPRAKQAKQDK 331 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 5/194 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT E+ ++ G RD ++ L Y G+R+SEL L D D G + Sbjct: 129 LPDVLTRDEMATILARPDLSDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVR 188 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P+ V + ++ R + + A+F++R G LSRQ ++++ Sbjct: 189 VFG-KGAKERIVPVHHVSCALVTAYLRDWRPAF--SPVEPAMFLNRSGKGLSRQAVWKVV 245 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + EAG PH RH+ L E GAD R +Q LGH +I T YT A R Sbjct: 246 KRHVAEAGIHKDISPHTFRHSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLR 305 Query: 181 GLWERNNLINEKLK 194 + ++ + + Sbjct: 306 RIHNAHHPRTRRPR 319 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 5/196 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ E+ ++ G RD ++ L Y G+R+SEL+ +H D D ++G I Sbjct: 111 LPNILSQDEMLRLLTTPDITNKLGFRDKVILELLYASGIRVSELIGVHVLDFDQDKGIIK 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K G PL + + + + R + +F++R G L+RQ ++II Sbjct: 171 VFG-KGGKERYIPLHSSAMKLLIHYVQKIRPMF--TPIEKFLFLNRSGKGLTRQAIWKII 227 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + A PH RH L E GAD R +Q LGH ++ T YT + R Sbjct: 228 KRYALLASINKSISPHTFRHTFATHLLEGGADLRSVQLLLGHVDMSATELYTHVQSDRLK 287 Query: 181 GLWERNNLINEKLKRE 196 + + + + E Sbjct: 288 YIHSMFHPRSNYVSSE 303 >UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriaceae RepID=D1AIZ1_SEBTE Length = 307 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 2/191 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT ++ + + TG RD +I Y G+R SEL+ L ++L E + Sbjct: 117 LPTVLTKDDINKLRNVIDISKVTGIRDRLIIEFLYSSGLRSSELVSLSELMINLEEREVR 176 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K V + R+ E++ + N + +F++ RG R++ + R+I Sbjct: 177 VLG-KGNKERVTFFSENARKWYEKYISAKRNEYKNYTPNIVFVNSRGERITTRSLRRLIA 235 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 D +AG + PH+ RH+ L D R +Q+ LGH +I T YT + A Sbjct: 236 DYAEKAGINKEVTPHVFRHSFATTLLNNKVDIRYLQELLGHSSISTTQVYTHVSKALLRE 295 Query: 182 LWERNNLINEK 192 ++ + + + ++ Sbjct: 296 IYIKAHPLADE 306 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 3/193 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +L E+QA+ A+ + GAR+ +I L Y G+R SE L +D+DL+ + Sbjct: 112 KLPSFLYENEMQAIFDAIDTDSLLGARNLAIIELLYASGIRASECTGLKLKDIDLDLSTL 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQER-ANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K P+ EA+ + +R A + ++D +FI+ RG L+ + +I Sbjct: 172 LVMG-KGKKERFLPVGSFAVEALSLYLDKRTAKFGPHAQSDPLFINYRGGALTDRGLRKI 230 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + +A ++ PH++RH + GAD R +Q+ LGH +++ T YT R Sbjct: 231 LAKVIEDASLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDLKATQIYTHVTRDRL 290 Query: 180 AGLWERNNLINEK 192 ++ ++ +K Sbjct: 291 RDVYRHSHPRAKK 303 >UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetobacter RepID=B2HX80_ACIBC Length = 308 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 7/197 (3%) Query: 2 SKRRYLTGKEVQAMMQAVC-----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + + V ++ RD ++ L Y G+R++EL L +D+D N Sbjct: 112 PLPGMIDIETVNQILDQPMPEKPVDQQLWLRDKAMLELLYSSGLRLAELQGLTIKDIDFN 171 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDA-IFISRRGSRLSRQQ 115 + I K + + P +E++ W + WKG +A +FIS+RG L+ +Q Sbjct: 172 RQLVRITG-KGNKTRIVPFGKKAKESLLNWLKIYNIWKGHFDQNASVFISQRGGALTPRQ 230 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 + ++ AG HPH+LRH + D R +Q+ LGH N+ T YT + Sbjct: 231 IEKRVKLQAQRAGVNVDLHPHLLRHCFASHMLSSSGDLRSVQEMLGHSNLSTTQIYTHID 290 Query: 176 AARFAGLWERNNLINEK 192 A ++++ + K Sbjct: 291 FDHLAQVYDQAHPRATK 307 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 4/197 (2%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT EV ++ G RD + L Y G+R+SE+ L D+ + Sbjct: 100 LPESLTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFEGKYLK 159 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 I K + P+ + ++R+ Q R +T +F++ RG ++SR ++I+ Sbjct: 160 ICG-KGKRERIVPINDRALDILQRYIQTSRVIMVKGKKTSELFLNFRGDKISRVGIWKIV 218 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++A ++ +PH LRH+ L + GAD R +Q LGH +I T YT ++A Sbjct: 219 KEAMKKSKIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYTHVDSAHLK 278 Query: 181 GLWERNNLINEKLKREE 197 + + + K R+ Sbjct: 279 KQIAK-HPKHSKHARQN 294 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + KE+ + +AV GA R+ ++ + Y GMR+SE L + D+D + Sbjct: 106 KLPHFFYEKEMNMLFEAVYQAEGAQKLRNIAILEVLYGTGMRVSECAALQWSDIDFSMQT 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQ---ERANWKGADRTDAIFISRRGSRLSRQQA 116 I + K P +EA++ + + E K + +FI+ ++ Sbjct: 166 ILVLG-KGNKERYVPFGRYAKEALQNYRKNEWEPFLSKYKQTHNFVFINHYAKPITTTGI 224 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 I+ + + HPHMLRH+ L GAD R +Q+ LGH ++ T YT Sbjct: 225 EYILNQVITASSLNGKIHPHMLRHSFATALLNNGADLRTVQELLGHSSLSTTQIYTHVTK 284 Query: 177 ARFAGLWERNNLIN 190 + + + + Sbjct: 285 EKLQESYRKYFPRS 298 >UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium RepID=D2Q578_9BIFI Length = 306 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 15/202 (7%) Query: 2 SKRRYLTGKEVQAMMQ------------AVCYGATGARDYCLILLAYRHGMRISELLDLH 49 + L+ + + +M +V A G R+ ++ + Y G+R++EL+ L Sbjct: 107 TLPAVLSESQAEKLMDCVDEQMPKSRTKSVRKQAVGLRNAAMLEVLYATGIRVAELVGLD 166 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRG 108 D+ + + + K V P +++ RW ++ R A DA+F+ +G Sbjct: 167 VHDVAFDNRTMKVTG-KGNKQRVVPFGVPAEQSIRRWLEDGRPRLVRARSADALFLGAQG 225 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 +R+ ++ +++ + AG PH LRH+ L + GAD R +Q+ LGH +++ T Sbjct: 226 NRIDQRVVRQVVHECAQRAGVP-DISPHALRHSAATHLLDGGADLRQVQELLGHSSLKTT 284 Query: 169 VRYTASNAARFAGLWERNNLIN 190 RYT + + + + Sbjct: 285 QRYTHVSIEQLKARYGQAFPRA 306 >UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC Length = 301 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 5/194 (2%) Query: 1 MSKRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + R+ E+QA+ + R+ L+ + Y G+R+SE L D+D + Sbjct: 109 LRLPRFFYENEMQALFDSVAGDSPLDLRNRALLEVLYGSGIRLSECSSLSVSDIDFDSEV 168 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWK---GADRTDAIFISRRGSRLSRQQA 116 + I K PL ++A++ + +E + D +F++ G ++ Sbjct: 169 MLIHG-KGNKERYAPLGSFAQDALQEYFREGRQVLMTKYHEEHDIVFVNHHGKPITPTGI 227 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 ++ ++ + HPHMLRH L GAD R +Q+ LGH N+ T Y Sbjct: 228 EYVLNQMIKKSSLDSDIHPHMLRHTFATHLLNNGADLRTVQELLGHANLSTTQIYAHVTK 287 Query: 177 ARFAGLWERNNLIN 190 + + Sbjct: 288 ESLQKNYRSFHPRA 301 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 258 bits (660), Expect = 9e-68, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L+ EV ++ A A G RD ++ L Y G+R+SEL+ L D++L + Sbjct: 126 LPGLLSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLNDVNLETR-VL 184 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + R K + P+ +AV+ + R R+ +F++ RG R++RQ +I+ Sbjct: 185 VARGKGDKERIVPVGAPAADAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQGFAKIL 244 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 AG + PH LRH+ L E GAD R +Q+ LGH ++ T YT + Sbjct: 245 DRCARRAGIRRRISPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHVDRTHVK 304 Query: 181 GLWERNNLIN 190 L++R + Sbjct: 305 RLYDRFHPRA 314 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 258 bits (660), Expect = 9e-68, Method: Composition-based stats. Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 7/197 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-----GARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + + V ++ RD ++ L Y G+R++EL L +D+D N Sbjct: 115 PLPGMVDIETVHQILDQAPPDKPIEQQLWLRDKAILELLYSSGLRLAELQGLMIKDIDFN 174 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA-DRTDAIFISRRGSRLSRQQ 115 + I K + + P ++++ W + W+G + A+FIS+RG+RL+ +Q Sbjct: 175 RQLLRITG-KGNKTRIVPFGQKAKDSLIEWLKIYRIWQGEFNLDSAVFISQRGNRLTPRQ 233 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 ++ AG HPH+LRH + D R +Q+ LGH N+ T YT + Sbjct: 234 IENRVKLQAQRAGVNVDLHPHLLRHCFASHMLSASGDLRSVQEMLGHSNLSTTQIYTHVD 293 Query: 176 AARFAGLWERNNLINEK 192 + A ++++ + +K Sbjct: 294 FDQLARVYDQTHPRAQK 310 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 258 bits (660), Expect = 9e-68, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 11/198 (5%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT +++A++ A G R+ ++ L Y G+R+SEL+ L L+ +G + Sbjct: 127 PLPKALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSELVTLPVAMLNQRQGVL 186 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDA-------IFISRRGSRLS 112 I K G + PL + + ++R+ ++ R + A +FI+ RLS Sbjct: 187 RITG-KGGKERLVPLGEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTNLKRLS 245 Query: 113 RQQAYRIIRDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 RQQ +R I+ G + PH+LRH+ L GAD R +Q LGHR+I T Y Sbjct: 246 RQQFWRWIKHYAALVGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSISTTQIY 305 Query: 172 TASNAARFAGLWERNNLI 189 T L +++ Sbjct: 306 TLIARQHLQQLHAQHHPR 323 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 2/190 (1%) Query: 2 SKRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + EV+ ++ + RD ++ L Y GMR+SELL L DL G + Sbjct: 107 QLPDTWSQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQFELGYL 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 K + + P+ + VER+ Q+ N G T+A+F++ RG RLSRQ +++I Sbjct: 167 QCEG-KGERARIIPVSSVAQSFVERYIQQARNGLGGRETEALFLNGRGGRLSRQGFWKMI 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + AG + PH+LRH+ L E GAD R IQ LGH ++ T YT N +R Sbjct: 226 KRRAKLAGIEKEITPHVLRHSFATHLLENGADLRAIQQMLGHADLATTQVYTHVNKSRLH 285 Query: 181 GLWERNNLIN 190 ++ +++ Sbjct: 286 DVYRKHHPRA 295 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 4/192 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVC--YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 +S L K V +++++ G RD L+ + Y GMR+SE+++ + D +E Sbjct: 104 LSLPHVLDQKTVSNLLESIDIQDIPLGCRDRALLEMIYACGMRVSEIINCKLESFDKDEA 163 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAY 117 + + K + + P+ +A++ + ++ R IF++ RG L+R++ Sbjct: 164 FVRVLG-KGNKTRLVPVGRSALDALQMYLEKGRPKLVRTGTKSHIFLTVRGRPLTRERIR 222 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 +I+R+ AG PH+LRH+ L E GAD R+IQ+ LGH +I T YT Sbjct: 223 QILRERARAAGLEQHVFPHILRHSFATHLLENGADLRIIQEMLGHADISTTQIYTHLEQQ 282 Query: 178 RFAGLWERNNLI 189 R + R + Sbjct: 283 RLNSIHHRFHPR 294 >UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobia RepID=B2UMQ9_AKKM8 Length = 300 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 13/197 (6%) Query: 2 SKRRYLTGKEVQAMMQAVCYGA--------TGARDYCLILLAYRHGMRISELLDLHYQDL 53 + +LT ++ +++ A RD ++ L Y GMR+SEL+ L + Sbjct: 109 TLPVFLTLNQMLELLELPYKTAVPANAPAWLPYRDAAILELFYSCGMRLSELVGLDVGSV 168 Query: 54 DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 D + + K + P+ A+E + + + +F+SR G+RLS Sbjct: 169 DHRFRGVKVMG-KGRKERILPVGTPALAALETYV----SMACLPKNSPLFVSRIGTRLSA 223 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 + ++ + PH +RH + E GAD R +Q+ LGH ++ T YT Sbjct: 224 RSVQMMLNKYVKLSSIPFTISPHKIRHTFATHILEAGADLRSVQELLGHASLSTTQIYTH 283 Query: 174 SNAARFAGLWERNNLIN 190 AR A ++ + + Sbjct: 284 VTRARMAEVYRQAHPRA 300 >UniRef50_Q0EWI0 Tyrosine recombinase XerD n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWI0_9PROT Length = 299 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 5/189 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + ++ +V+ ++ A G RD C++ L Y G+R+SEL+ L ++++ G + Sbjct: 112 PLPKMMSEHDVERLLAAPETEDPVGLRDRCMLELLYATGVRVSELVSLTRGQVEMDAGLL 171 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P + + +++W R + +F R G ++RQ + I Sbjct: 172 RVIG-KGDKERLIPFGEEAGQWLQQWLLLRP---AKPASPYLFAGRGGHAMTRQNFWLRI 227 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + AG + PH LRHA L GAD R +Q LGH ++ T YT + AR Sbjct: 228 KRYATMAGIMPLPSPHTLRHAFATHLLNHGADLRAVQMLLGHAHVTTTEIYTHVSRARMH 287 Query: 181 GLWERNNLI 189 L ++ + Sbjct: 288 DLVNHSHPL 296 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 16/202 (7%) Query: 3 KRRYLTGKEVQAMMQAVCYGAT------------GARDYCLILLAYRHGMRISELLDLHY 50 L + +++M V A G R+ ++ L Y G+R+ EL L+ Sbjct: 123 LPSVLDEYQAESLMNNVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIRVGELTSLNI 182 Query: 51 QDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQE--RANWKGADRTDAIFISRRG 108 QD++ + I + K V P +A+ W + R +A+F+ RG Sbjct: 183 QDINFSSHTIKVTG-KGNKQRVVPFGVPAYKALSAWISKDGREILLRNSVEEAVFLGTRG 241 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 R+ ++ +I+ D A PH LRH+ + GAD R +Q+ LGH ++ T Sbjct: 242 KRIDQRLVRQIVHDEAKSAHVP-DISPHALRHSAATHMLNGGADLREVQELLGHSSLNTT 300 Query: 169 VRYTASNAARFAGLWERNNLIN 190 RYT + + + Sbjct: 301 QRYTHVSIESLKRKYSQAFPRA 322 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 84/216 (38%), Gaps = 28/216 (12%) Query: 3 KRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 L+ EV+ ++ A A RD L+ Y G R+SE + L ++D+DL E Sbjct: 121 LPDVLSISEVERVIDAAGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFEDIDLTES 180 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDA---------------- 101 + + K + P+ A+ + R + Sbjct: 181 VVRLSG-KGQKQRLVPIGKCAVRALRDYLANARPILASRAQKSPATAKSRLKSPLNSSSK 239 Query: 102 ------IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRL 155 IF+++RG LSRQ A+ I AG A + HPH LRH+ L GAD R Sbjct: 240 SANTHVIFLNKRGKSLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISGGADVRT 299 Query: 156 IQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINE 191 +Q+ LGH ++ T YT + + ++ Sbjct: 300 VQELLGHASVTTTQIYTHISPDALMEAYVMSHPRAR 335 >UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S88_SHEDO Length = 321 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 2/195 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + + + ++ RD ++ L Y G+R+ EL L+Y D+ L + Sbjct: 128 PLPKNIDVDAISHLLAIDGDDPLVIRDRAIMELFYSSGLRLGELASLNYGDIHLGLQEVK 187 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K G P+ EA+ W +R AD A+F+S +G RLS + + Sbjct: 188 VLG-KGGKERRVPVGKLAMEALALWHTQRLLLVQAD-EPALFVSNQGKRLSHRSIQARMA 245 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G HPH LRH+ + E D R +Q+ LGH N+ T YT+ + A Sbjct: 246 KWGQNQALSVPVHPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTSLDFQHLAK 305 Query: 182 LWERNNLINEKLKRE 196 +++ + +K + + Sbjct: 306 VYDGAHPRAKKGREK 320 >UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3Y9_9PLAN Length = 314 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ ++ A Y RD L+ L Y G R SE+ + +DL + + Sbjct: 122 TIPDVLSPTVAARLLDAPQPYDPLFRRDRALLELLYATGCRASEVSVMEVRDLRIEDRFC 181 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRT---DAIFISRRGSRLSRQQA 116 R K + PL AVE + + ER + + +S RG RL+RQ+ Sbjct: 182 LARG-KGSKERLVPLGDPALAAVEAYLEHERPKLAAKSKQGVPPWLLLSSRGQRLTRQKI 240 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 + +++ + G PH LRH+ L GAD R +Q+ LGH +I T YT + Sbjct: 241 WELVKQYALRCGAPASMSPHTLRHSFATHLLSGGADLRQVQELLGHASIGTTQIYTHVDQ 300 Query: 177 ARFAGLWERNNLIN 190 +R + + + Sbjct: 301 SRLKKIHSQFHPRA 314 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 4/194 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + + LT ++V+ ++ + RD + L Y G+R+SE + ++ + + Sbjct: 20 TLPKALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVGVNLSSFESELSFVK 79 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ +EA+E+W ER + A T+A+FI++ G R+S + I Sbjct: 80 VLG-KGKKERMLPVGKFAKEAIEKWLVEREHI--AKDTNALFINKYGKRISIRAMQERIY 136 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + I G + PHMLRH+ + E D R IQ+ LGH ++ T YT N + A Sbjct: 137 NISIAQGL-SPVSPHMLRHSFATHILESSGDLRSIQEMLGHSSLSTTQIYTKLNFQQLAK 195 Query: 182 LWERNNLINEKLKR 195 +++R++ +K + Sbjct: 196 IYDRSHPHGKKENK 209 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 255 bits (654), Expect = 4e-67, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 4/191 (2%) Query: 3 KRRYLTGKEVQA-MMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +L +E++ ++ RD +I L Y GMR+SE L D + Sbjct: 111 LPTFLYEEEMEHWLLALPANKPLEKRDKAIIELLYATGMRVSECSMLALDQWDRVSETVR 170 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGA-DRTDAIFISRRGSRLSRQQAYRI 119 + K P+ AVE + + R A D T +F++ RG LS + +I Sbjct: 171 VFG-KGRKERYVPVGKMAVSAVESYIHEARPKLLRANDPTSHLFLNYRGGALSDRSIRKI 229 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + EA + PH +RH+ L GAD R +Q+ LGH++++ T YT + R Sbjct: 230 VEKRLDEAAMQKKISPHAIRHSFATHLLNAGADLRAVQELLGHQSLKTTQVYTHVSKERL 289 Query: 180 AGLWERNNLIN 190 +++ + Sbjct: 290 YAVYKGAHPRA 300 >UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6T2_KANKD Length = 299 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 2/194 (1%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + + + + RD ++ L Y G+R++EL + DL ++ + Sbjct: 107 LPKNIDVDSLNHFLDQMPEDEPIEVRDKAMMELLYSSGIRLAELSAMDIDDLSFSDQSLR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K P ++ + W +ER N+ A+F+S++G+RL+ + + + Sbjct: 167 VLG-KGNKVREVPFGNSSKKVLSLWLKERNNFAKNSDEKALFLSQQGNRLTNRAIQQRLA 225 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G + G + HPH LRH+C + E +D R +Q+ LGH +I T YT + A Sbjct: 226 HWGKKLGLNDRLHPHKLRHSCATHVLESSSDLRAVQELLGHASISTTQIYTHLDFQHLAK 285 Query: 182 LWERNNLINEKLKR 195 ++ + K K Sbjct: 286 TYDAAHPRARKKKE 299 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 255 bits (653), Expect = 5e-67, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 7/189 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S ++LT E+ ++ ++ R+ + L Y GMR+SEL +L+ D+D + Sbjct: 114 SIPQFLTVDELFTLLDSIKTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDIDRESHLV 173 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K + P+ +AV+ + A+F++R R S R++ Sbjct: 174 RVRG-KGNRERLVPVGDRALKAVDDY-----RTCIDGEFGALFLNRDAHRFSDSSIRRVL 227 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 G PH LRH+ + + GAD R IQ+ LGH ++ T YT AR Sbjct: 228 SVLVKACGLGVPVSPHTLRHSFATHMLDAGADLRGIQEILGHASLSSTQIYTHVTYARLM 287 Query: 181 GLWERNNLI 189 +++R + Sbjct: 288 EVYDRAHPR 296 >UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z4_9BACT Length = 314 Score = 255 bits (653), Expect = 6e-67, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 19/208 (9%) Query: 2 SKRRYLTGKEVQAMMQAVCY-----------------GATGARDYCLILLAYRHGMRISE 44 ++ ++ + +AV ARD ++ + Y G+RISE Sbjct: 108 PLPLVMSINQIDLLTKAVGEYWEMAAANGISKSDEAAEFAAARDLAMVEVIYSGGLRISE 167 Query: 45 LLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGAD-RTDAIF 103 L D+DL G +R K + L ++A+ + + R+ G +F Sbjct: 168 TTGLDMGDIDLIGGIARVRG-KGKKERIAVLGRPSQKALRNYFKLRSTVGGGRAPGSPVF 226 Query: 104 ISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHR 163 +++ G RL+ + R +++ I A PH LRH+ L + GAD R +Q+ LGH Sbjct: 227 LNKFGKRLTPRSFQRNLKNYLIAANLPPDLTPHKLRHSFATHLLDAGADLRSVQEMLGHE 286 Query: 164 NIRHTVRYTASNAARFAGLWERNNLINE 191 N+ T YT +A R +++ + + Sbjct: 287 NLSTTQIYTHVSAERMKEVYKEAHPRAK 314 >UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium RepID=C4L615_EXISA Length = 293 Score = 255 bits (653), Expect = 6e-67, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 5/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAV---CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 S + EV+ +++A ARD +I + Y G+R++EL ++ D Sbjct: 104 SLPTFAVPTEVEQLLEAASRQDDPFLQARDVAIIEVLYGTGIRVAELCGMNLSSFDEVLS 163 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYR 118 +++ K P+ +A++R+ + R G A+F+S++G+R++ Q Sbjct: 164 FVHVMG-KGKKERYVPIGQYAVQALQRYIELRKGV-GLPTETALFLSQKGNRMTTDQIRY 221 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ ++G PH LRH+ +L ERGAD R +Q+ LGH ++ T RYT + R Sbjct: 222 VMKRLRKDSGVHKPLTPHSLRHSFATDLLERGADLRAVQELLGHESLSTTGRYTHVSTER 281 Query: 179 FAGLWERNNLI 189 +++ + Sbjct: 282 LRSIYQATHPR 292 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 1/184 (0%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 S Y T E++ +M + R + + L Y G+R+SE L +DL G + Sbjct: 106 SLPVYCTRDEIEKIMAQFGHSPKDIRWHAIAELLYGCGLRVSECAALTMNQVDLELGMLR 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 I K + P+ + V + T +FI+R G + + +I+ Sbjct: 166 IWG-KGNKERLVPMPKQTIKIVREYVDTVRPLYQKKPTSWLFITRLGKKTTTASIESMIK 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 I+AG PH LRH + E GAD R +Q+ LGH +I T YT + +R Sbjct: 225 SVCIQAGIQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSDITTTQIYTHIDRSRLRT 284 Query: 182 LWER 185 ++ Sbjct: 285 AYDE 288 >UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYI3_9BACT Length = 312 Score = 255 bits (652), Expect = 7e-67, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 6/194 (3%) Query: 2 SKRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 L ++ ++ A RD ++ L Y G+R++EL L+ D+DL + Sbjct: 113 KLPNSLDPDQISQVLNATITSDDPMAMRDKAMLELTYSCGLRLAELASLNVFDIDLTDAS 172 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K + P+ A++ W Q+R K D +A+FI+ RG R+ + Sbjct: 173 LIVTG-KGNKTRQLPIGRQAITALKSWLQQRGQLKCHDA-NALFINHRGQRMGVRGIQMR 230 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + + G HPHMLRH+ L + D R +Q+ LGH NI T YT + Sbjct: 231 MANMAATHG--QHIHPHMLRHSFASHLLQSSGDLRAVQELLGHSNISTTQVYTHLDYQHL 288 Query: 180 AGLWERNNLINEKL 193 A ++++ + ++ Sbjct: 289 AKVYDKAHPRAQEK 302 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + LT ++V ++ A GARD ++ L Y G+++SEL++L D+ L + Sbjct: 106 KPPKSLTVEQVDKLLSAPDSGTPQGARDKAMLELLYASGIKVSELVNLSIHDIHLEMRFL 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 G + P+ E+V + ++ R DA+F++ G+RL+RQ ++I Sbjct: 166 RCAVS-GGKERILPITPIAAESVAFYVRDMRDKLMRDAGEDALFLNSLGTRLTRQGFWKI 224 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G AG PH LRH+ L GAD R +Q+ LGH + T Y S Sbjct: 225 IKKYGKLAGIDEDITPHTLRHSFAMHLLGNGADLRSVQEMLGHSALSTTGMY-QSAKKSM 283 Query: 180 AGLWERNNLIN 190 +++ + + Sbjct: 284 KEVYDHYHPRS 294 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 4/190 (2%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ ++V ++ A C RD ++ + Y G R++E++ L + L EG Sbjct: 127 LPKVLSPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIVTLPLNSVKLTEGYAR 186 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTD-AIFISRRGSRLSRQQAYRI 119 K + L AVE + + ER + T+ A+F++R G +LSR + I Sbjct: 187 CVG-KGNKERMVSLNPVAVAAVEAYLRHERPVLTRRNTTEQALFLNRGGKQLSRVMVWNI 245 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ G + PH LRH+ + GA+ R +Q+ LGH NIR T YT + +R Sbjct: 246 VKKNAARVGCSKEVSPHTLRHSFATHMMAGGAEIRALQELLGHANIRTTQIYTHVDHSRL 305 Query: 180 AGLWERNNLI 189 + + + Sbjct: 306 KAVHQMYHPR 315 >UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococcaceae RepID=XERC_STAA2 Length = 298 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 3/194 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 ++ +E++A+ + V RD ++ L Y G+R+SEL+++ QD+D + Sbjct: 106 LPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDFYANGVT 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K P R+++E + + + D + ++ +G ++ + ++ Sbjct: 166 VLG-KGSKERFVPFGAYCRQSIENYLEHFKPIQSC-NHDFLILNMKGEAITERGVRYVLN 223 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 D V++ HPH LRH L +GAD R +Q LGH N+ T +YT + + Sbjct: 224 DIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRK 283 Query: 182 LWERNNLINEKLKR 195 ++ + +K Sbjct: 284 VYLNAHPRAKKENE 297 >UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular organisms RepID=XERC_RALPJ Length = 328 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 17/207 (8%) Query: 3 KRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDL-------- 53 + L+ ++ A+M+ A RD + L Y G+R+SEL+ L + + Sbjct: 123 LPKALSVEQAVALMEQLPGDDAETIRDRAVNELFYSCGLRLSELVSLDMRHVKAGAYESA 182 Query: 54 ---DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD----AIFISR 106 DL + + K P+ EA+ W RA +D A+F+S Sbjct: 183 SWLDLEAREVQVLG-KGSKRRTVPVGTKATEALAAWLAVRAQLAKSDAAPEDAHALFLSP 241 Query: 107 RGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIR 166 RG RL+++Q ++ I AG HPH+LRH+ + + D R +Q+ LGH +I Sbjct: 242 RGKRLAQRQIQLRMKRNAIAAGVPADVHPHVLRHSFATHMLQSSGDLRAVQELLGHASIA 301 Query: 167 HTVRYTASNAARFAGLWERNNLINEKL 193 T YT+ + A ++++ + +K Sbjct: 302 STQVYTSLDFQHLAKIYDQAHPRAKKK 328 >UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betaproteobacteria RepID=Q0AFS1_NITEC Length = 321 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 4/198 (2%) Query: 2 SKRRYLTGKEVQAMM--QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 L+ E ++ RD + L Y G+R++EL L D+D G Sbjct: 126 KLPHALSPDEAAQLLTFNPSSNDMLATRDLAIFELFYSSGLRLTELTQLQPTDIDFTGGT 185 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K + + P+ A++ W R+ W T A+F+S+RG R+ + Sbjct: 186 VRVTG-KGNKTRIVPVGELALRALQAWLPLRSAWLIPGET-ALFLSQRGRRIHPRTIAYR 243 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + ++ HPH LRH+ L + D R +Q+ LGH +IR T YT + Sbjct: 244 LHQRAQLQNLDSRVHPHTLRHSFASHLLQSSGDLRAVQEMLGHSSIRSTQVYTHLDFQHL 303 Query: 180 AGLWERNNLINEKLKREE 197 A ++++ + K + + Sbjct: 304 AKIYDQAHPRARKKPKTD 321 >UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD9_ALIAD Length = 307 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 5/194 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 RYL +EV A++ V RD L+ Y G+R+SE + L DLDL+ G Sbjct: 109 LPRYLHEEEVAALIDHVGGDDFVALRDRALLEFLYATGVRVSECVHLDIGDLDLSAGFAR 168 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K G + +A+ R+ R A+FI+RRG RL+ + R++ Sbjct: 169 VLG-KGGRERYVMVGRRAVDALRRYLPLRDRMAR---CSAVFINRRGGRLTDRSVRRVLE 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 E + H H LRH+ + GAD R +Q+ LGH ++ T YT ++ + A Sbjct: 225 RRIQEVPGLRSIHVHGLRHSFATHMLNGGADLRSVQELLGHASLSSTQIYTHTSREQLAR 284 Query: 182 LWERNNLINEKLKR 195 + + + + Sbjct: 285 AYYAAHPRARRGTQ 298 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 4/188 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT +E+ ++ AV G RD ++ + Y G+R+SEL L DL EG I Sbjct: 114 LPDILTVEEIDRIVAAVDTSTVKGRRDSAMLEVLYSCGLRVSELTSLRLGDLFFGEGYIR 173 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K + P+ RE ++R+ +RA +D +F++ RG++L+R + I+R Sbjct: 174 VTG-KGDKQRLVPVSGAAREKIQRYLDDRAT--KTSASDVVFLNNRGTQLTRVMVFTILR 230 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +A AG PH RH+ L E GA R +Q+ LGH +I T YT Sbjct: 231 EAVHRAGIDKHISPHTFRHSFATHLLEGGASIRQVQEMLGHESILTTEIYTHLEGDHLRD 290 Query: 182 LWERNNLI 189 E+ + Sbjct: 291 TVEKYLPL 298 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 8/196 (4%) Query: 3 KRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 L+ +EV +++A A RD L+ Y G RISE + + ++D+DLNE Sbjct: 125 LPDVLSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVGVKFEDIDLNES 184 Query: 59 RINIRRLKNGFSTVHPLRFDEREAVERWTQERAN---WKGADRTDAIFISRRGSRLSRQQ 115 + + K + P+ A+ + ++ KG IF+++RGS LSRQ Sbjct: 185 VVKLTG-KGSKQRLVPIGGCAVRALRNYMEKSRPELALKGKRELHTIFLNKRGSALSRQS 243 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A+ I+ AG A HPH LRH+ L GAD R +Q+ LGH ++ T YT + Sbjct: 244 AWEIVTQAGERAKLDKPLHPHTLRHSLATHLIAGGADVRTVQELLGHASVTTTQIYTHIS 303 Query: 176 AARFAGLWERNNLINE 191 + ++ + Sbjct: 304 PDALVEAYVMSHPRAK 319 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 92/189 (48%), Gaps = 4/189 (2%) Query: 4 RRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 LT +EV+ ++ G RD ++ + Y GM+++ELL+L D++L I Sbjct: 106 PDILTIEEVEKLLMGPDGNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINLKLSYIKC 165 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 R +K + P+ + +E + + R D +F + +G +++RQ ++II+ Sbjct: 166 RGIK-NKERIIPMGSYAVKCLEIYLKVRTKL-NVQNIDYLFFNLQGDKMTRQGFWKIIKQ 223 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS-NAARFAG 181 E+G + + + LRH+ L + GAD + IQ+ LGH ++ T Y+ R A Sbjct: 224 YAQESGIKKKINAYTLRHSFAVHLLQNGADIKTIQELLGHSDMATTQIYSGMYRKTRIAE 283 Query: 182 LWERNNLIN 190 ++++ + Sbjct: 284 VYKKTHPRA 292 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 +T ++ A++ A + G RD L+ + Y G+R++E + L D+DL+ G I Sbjct: 105 KLPTLITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDLHRGSI 164 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRI 119 K + PL + VER+ E R D +F+S++ S +SRQ A+ I Sbjct: 165 RTIG-KGDKLRLVPLGQEAAYWVERYCNESRPLLLKNKICDEVFVSQKRSGISRQLAWMI 223 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 +++ AG PH LRHA L G D R +Q LGH +I T YT R Sbjct: 224 VKEYAEAAGIA-SLSPHGLRHAFATHLVNHGVDLRSVQMMLGHSDINTTQIYTHVANIRL 282 Query: 180 AGLWERNNLIN 190 + + ++ + Sbjct: 283 KNMVDEHHSRS 293 >UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomycetales RepID=D2NUA7_9MICC Length = 437 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 17/206 (8%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE---- 57 + ++ +++Q ++ ATG R+ ++ Y G R+SE+L+ D+ Sbjct: 231 LPKAVSVEDIQRLLAVPDRETATGLRNRAILEFLYATGARVSEMLNADIDDVHFEGTLTD 290 Query: 58 ---------GRINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADR-TDAIFISR 106 G + + K + P+ ++A++ + + R + + T A+F++ Sbjct: 291 EDGNQITLPGYVRLFG-KGNKERLVPIGSYAQKAIQDYLVRARPSLVAHGKGTAALFVNG 349 Query: 107 RGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIR 166 RG RL RQ A+ I+++A AG + PH +RH+ L + GAD R++Q+ LGH +I Sbjct: 350 RGGRLGRQGAWLILKEAAEAAGLSSDFSPHSMRHSFATHLLQGGADIRVVQELLGHASIA 409 Query: 167 HTVRYTASNAARFAGLWERNNLINEK 192 T YT ++ + + Sbjct: 410 TTQVYTKVTPEGLMEVYRMAHPRAHE 435 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 3 KRRYLTGKEVQAMMQAVCYG--ATGARDYCLILLAYRHGMRISELLDLHYQD---LDLNE 57 + LT ++ +M+ ARD ++ L Y G R+SEL+ ++ D +D ++ Sbjct: 110 LPKALTISQIVSMIDVAYREGQPITARDQAMLELLYSSGARVSELIGINLNDLSSIDTSD 169 Query: 58 GRINIR--RLKNGFSTVHPLRFDEREAVERWT-QERANWKGADR--TDAIFISRRGSRLS 112 G++ R K + PL +AVE + + R + T A+F++ RGSR+S Sbjct: 170 GKVTTLKLRGKGAKERIVPLGSFATKAVENYLVRVRPDLASKSSKVTSALFLNSRGSRIS 229 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 RQ A++++ DA AG PH+ RH+ L GAD R++Q+ LGH ++ T YT Sbjct: 230 RQSAWQMVLDAADAAGITEHVSPHVFRHSYATHLLNGGADIRVVQELLGHASVTTTQIYT 289 Query: 173 ASNAARFAGLWERNNLIN 190 + + + Sbjct: 290 LITIDKVRESYALTHPRA 307 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 34/223 (15%) Query: 3 KRRYLTGKEVQAMMQAV----CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEG 58 + L + + ++ A G G RD L+ L Y G RISE++ L D+DL G Sbjct: 131 LPKALPVEAIGRLLDAAGSADPDGPRGLRDRALLELLYATGARISEVVGLDVDDIDLGPG 190 Query: 59 R-----------------------INIRRLKNGFSTVHPLRFDEREAVERWT-QERANWK 94 R + K + P+ A+E + + R Sbjct: 191 RLAGRSSTDPTDPTDPQVAPPITSVVRLHGKGAKERLVPVGSFALRALEAYLVRGRPVLA 250 Query: 95 GADRTDA-----IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQ-THPHMLRHACGYELAE 148 A R +F++ RG RLSRQ A++++ DA AG PH LRH+ L E Sbjct: 251 AAGRGAGPARGALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHSFATHLLE 310 Query: 149 RGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINE 191 GAD R +Q+ LGH ++ T YT ++ + Sbjct: 311 GGADVRSVQELLGHASVTTTQIYTLVTVDALREVYVTAHPRAR 353 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +T +++ ++ A G RD L+ L Y G+R+SE + L + +LDL+ G I Sbjct: 122 PTLITEQQISRLLSAPDTDTPHGLRDKALLELMYATGLRVSEAVRLSFGNLDLDRGCITT 181 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + P+ + VER+ +E R DA+F+S++ + +SRQ A+ I++ Sbjct: 182 LG-KGNKQRIVPMGRESVYWVERYYKEARPLLLKGRSCDALFVSQKKTGISRQLAWMIVK 240 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + +AG PH LRHA L + G D R++QD LGH ++ T YT R Sbjct: 241 EYASQAGIE-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVANVRLHS 299 Query: 182 LWERNNLIN 190 + + ++ N Sbjct: 300 VVKEHHSRN 308 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 252 bits (644), Expect = 6e-66, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 3/172 (1%) Query: 20 CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDE 79 G RD ++ L Y G+R++EL+ L+ +D+++N G I N V P+ Sbjct: 125 NTTPKGIRDKAMLELLYATGIRVTELISLNLEDVNVNLGYIRCCN--NTKERVIPIGTLS 182 Query: 80 REAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHML 138 A++++ R + + ++F++ G RL+RQ ++II+ +A PH L Sbjct: 183 LIALQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQGFWKIIKVYTKQAAIEKSITPHTL 242 Query: 139 RHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 RH+ L E GAD + +Q+ LGH +I T Y + ++ + + Sbjct: 243 RHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQLTKHKIKDVYNKTHPRA 294 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 251 bits (643), Expect = 8e-66, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 8/182 (4%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 +YL+ EV+ +++A RDY +I L G+R+SEL +L +D+D NE + + Sbjct: 106 PKYLSEDEVKRLIEASSENP---RDYAIISLLAYSGLRVSELCNLKIEDVDFNERIVYVH 162 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + + EA++ + R D + +F S++ +++SR Q +RI++ Sbjct: 163 SGKGDKDRIVVVSPRVIEALQNYLYTRE-----DDMEYLFASQKSNKISRVQVFRIVKKY 217 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 +AG + PH+LRH L RG D R IQ +LGH ++ T YT + A ++ Sbjct: 218 AEKAGIKKEVTPHVLRHTLATTLLRRGVDIRFIQQFLGHSSVATTQIYTHVDDALLKSVY 277 Query: 184 ER 185 ++ Sbjct: 278 DK 279 >UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQI4_9BACT Length = 292 Score = 251 bits (643), Expect = 8e-66, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 YL+ E++ ++ R+ +I L Y G+RISEL L + G + Sbjct: 104 LPDYLSLPEIERLLHIYDEAIPLQFRNKFIIELLYSCGLRISELCGLRTDSFNYESGFLR 163 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 ++ K P ++ + R + + +S G L+R + ++ + Sbjct: 164 VKG-KGSKERSVPFGTQVASMSRQYIKNIRPQLCKKNNPPELIVSNNGRPLTRSRVWQFL 222 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++A I+A HPH+LRH+ L AD R+IQ+ LGH +I T YT R Sbjct: 223 KEAAIKAEINKNLHPHVLRHSFASHLLSNNADLRIIQELLGHADIATTEIYTHVEKTRLQ 282 Query: 181 GLWERNNLIN 190 + ++ Sbjct: 283 NIHQKFFPRA 292 >UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C57_SOLUE Length = 303 Score = 251 bits (643), Expect = 8e-66, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 8/193 (4%) Query: 2 SKRRYLTGKEVQAMMQAVC----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 +T +V +++ V ARD + L Y G+R+SEL L+ +D+D E Sbjct: 115 KLPEVMTADQVNSLIDGVGGVELERPHPARDRAIFELLYGCGIRVSELAGLNLEDIDRTE 174 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAY 117 G + +R K PL +++ER+ ER A A+F++ R +RL+ + Sbjct: 175 GWLRVRG-KGKKERQVPLPGQAAQSLERYLAERPV---AREQPAVFVNHRRARLTTRGIS 230 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ HPH RHA L GAD R IQ+ LGH + T +YT + Sbjct: 231 GIVKLYATYLSNDPGIHPHSFRHAYATHLLADGADLRAIQELLGHARLSTTQKYTQVSLT 290 Query: 178 RFAGLWERNNLIN 190 ++++ + Sbjct: 291 DLMAVYDKAHPKA 303 >UniRef50_Q1QE98 Tyrosine recombinase XerC subunit n=3 Tax=Psychrobacter RepID=Q1QE98_PSYCK Length = 349 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 8/201 (3%) Query: 2 SKRRYLTGKEVQAMMQA-----VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + ++ RD + L Y G+R+ EL+ L D+DL Sbjct: 146 PLPSIADVDLLTQLLDQEIPDTPEQARLWLRDKAMFELLYSSGLRVGELVALDIVDVDLA 205 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRR-GSRLSRQQ 115 + R+ + K + + PL +A+ R+ R W A+FIS + G+RLS + Sbjct: 206 DLRVRVTG-KGNKTRLVPLGIKAADAIRRYLPHRNLWVEQMD-QALFISEKLGTRLSTRA 263 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 + ++ A AG +PH+LRH + D R +Q+ LGH +I T YT + Sbjct: 264 VQQRLKVAATRAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQEMLGHSDISTTQIYTHVD 323 Query: 176 AARFAGLWERNNLINEKLKRE 196 A+ +++R + + ++ Sbjct: 324 FAKLTQVYDRAHPRATHVSKD 344 >UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XL74_9BACT Length = 337 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 20/205 (9%) Query: 3 KRRYLTGKEVQAMMQAVCYG---------------ATGARDYCLILLAYRHGMRISELLD 47 ++LT +++ ++ A RD ++ Y G+RISEL Sbjct: 136 LPKFLTAQQMVELLGAPLKPLATPKKKGPGRPISATVCYRDVAILETIYSCGLRISELCG 195 Query: 48 LHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISR- 106 L QD+D NE + +R K P+ A+ + G +F+ Sbjct: 196 LTAQDIDWNEQLVRVRG-KGKKERQVPIGEPALTAIRNYWSTLEQSPGGGS--PVFLGET 252 Query: 107 -RGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNI 165 + + LS + + ++ AG PH LRH+ + + GAD R +Q+ LGH ++ Sbjct: 253 EKAAALSPRVLQQRLKKYLALAGLDPSLTPHKLRHSYATHMLDAGADLRSVQELLGHAHL 312 Query: 166 RHTVRYTASNAARFAGLWERNNLIN 190 T YT + R ++ + Sbjct: 313 ITTQVYTHVSTERLKRAYDSAHPRA 337 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 4/189 (2%) Query: 4 RRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +T +++ ++ A G RD L+ L Y G+R+SE + L++ ++DL+ G I Sbjct: 105 PTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRGCITA 164 Query: 63 RRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 K + P+ + V R+ + R DA+F+S++ + +SRQ A+ I++ Sbjct: 165 LG-KGDKQRMVPMGQESAYWVGRYYTEARPALLKGRSCDALFVSQKKTGISRQLAWMIVK 223 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + +AG PH LRHA L + G D R++QD LGH ++ T YT G Sbjct: 224 EYASQAGIG-HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVANVWLQG 282 Query: 182 LWERNNLIN 190 + + ++ N Sbjct: 283 VVKEHHSRN 291 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 250 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 12/188 (6%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 S + LT +EV+ ++ + T RD + LL Y G+R+SEL +L D+D I Sbjct: 95 SLPKSLTREEVRKILSVIP--PTKKRDRLIFLLLYGAGLRVSELCNLKKSDVDFERSLII 152 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSR---LSRQQAYR 118 +R K V P+ E ++ + + R D ++ + + R R LS + + Sbjct: 153 VRGGKGAKDRVVPIPAFLLEGIKAYLETRD-----DDSEYLIVEDRRERKDKLSPKTVWY 207 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 +++ G AG + PHMLRH+ + E G D R IQ+ LGH N+ T YT Sbjct: 208 LLKKYGDRAGI--RVTPHMLRHSFATHMLENGVDIRAIQELLGHSNLSTTQIYTKVTVEH 265 Query: 179 FAGLWERN 186 E+ Sbjct: 266 LRKAQEKA 273 >UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia RepID=B1ZW75_OPITP Length = 324 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 11/196 (5%) Query: 3 KRRYLTGKEVQAMMQAVC--------YGATGARDYCLILLAYRHGMRISELLDLHYQDLD 54 ++LT +++ ++ T RD ++ L Y G+R+SEL L+Y +D Sbjct: 132 LPKFLTEEQMVRLLAGPQQLLASESIDAFTAHRDRLVLELLYGAGLRVSELTGLNYGAID 191 Query: 55 LNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQ 114 L G I K + P+ + ++ E A D + +++RG+R+S + Sbjct: 192 LEAGVARIVG-KGRKERLCPIGRVAVAVLRKFRDEFAPATAPDA--PVIVTQRGTRMSPR 248 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 + +++ A PH LRH+ L GAD RL+Q+ LGH + T YT Sbjct: 249 EVQLMLKRYLALAELPMDLTPHKLRHSYATHLLNAGADLRLVQELLGHAQLATTQVYTHV 308 Query: 175 NAARFAGLWERNNLIN 190 + AR ++ + + Sbjct: 309 SVARLKEIYAKAHPRA 324 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 12/199 (6%) Query: 2 SKRRYLTGKEVQAMMQ-----AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + R L + ++ A RD ++ Y G+R+SEL L+ DLD Sbjct: 131 TLPRVLAADQTAEILHNLEVGAEEEDPIALRDLAMVEFMYGTGVRVSELCRLNIGDLDFA 190 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKG----ADRTDAIFISRRGSRL 111 + I K V P A++RW R D +A+F+ +RG R+ Sbjct: 191 RQTVTILG-KGNKQRVVPFGESAAHALKRWIDIGRPAIAANGHHKDADEAVFLGKRGGRI 249 Query: 112 SRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 +Q ++ A PH LRH+ ++ E GAD R++Q+ LGH ++ T Y Sbjct: 250 DPRQVRTVVHQATSTVS-GGDVSPHALRHSAATDVLEGGADLRVVQEMLGHASLATTQIY 308 Query: 172 TASNAARFAGLWERNNLIN 190 T ++ R ++ + + Sbjct: 309 THVDSERLKAVFNQAHPRA 327 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 4/187 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 +YLT +E+ ++ ++ G RD LI L Y G+RISE L + +DL + Sbjct: 110 LPQYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEALGIKLSQIDLENEWLMP 169 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + PL +E + W +E TD I ++ G +SR A++I++ Sbjct: 170 IG-KGNKQRLVPLGSKAKENLRAWIEEGRPLT-HPTTDNIILNAHGKPMSRMGAWKIVQ- 226 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 Q PH RH+ E G D R++Q+ LGH +I T YT + Sbjct: 227 -LHTMHLSKQVSPHTFRHSFATHCLEAGMDLRVLQELLGHADISTTQIYTHVDKDFIKQE 285 Query: 183 WERNNLI 189 + Sbjct: 286 HRSFHPR 292 >UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW74_CHLT3 Length = 336 Score = 249 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 87/217 (40%), Gaps = 29/217 (13%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGA-----------------------RDYCLILLAYRH 38 + +L + Q + + A RD ++ + Y Sbjct: 121 TLPTFLNETQTQTLFDEILDHFNEAFYHDNRAKKHEKVNTLEWDFRYNRDRAILEMFYSC 180 Query: 39 GMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR 98 G+R++EL+ L+ +LD G + + K + PL ++ ++ + + + + R Sbjct: 181 GLRLAELIGLNIMELDFQNGFVKVLG-KGRKQRIIPLGESAQKTLKNYLEIKKKFFEMKR 239 Query: 99 T-----DAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADT 153 + +A+F++ +G R+ R+++ + PH+LRH L GAD Sbjct: 240 SNVLEREAVFVTEKGKRVYPVLVQRLVKKYLSPVTEQKKKSPHVLRHTFATHLLNNGADL 299 Query: 154 RLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 R + + LGH N+ T YT + R ++++ + Sbjct: 300 RSVSEMLGHSNLSTTEIYTHISFERLKQVYQQAHPKA 336 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 249 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 5/194 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 +L EV ++A R+ LI L Y GMRI E+ +L + +D N Sbjct: 110 KLPEFLYPAEVIEYLRAAADPQNDQYLRNSALIELLYATGMRIFEITNLTFSQIDFNSQI 169 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA--DRTDAIFISRRGSRLSRQQAY 117 ++I K + P +++++ R ++ IFI+ RG +L+ A Sbjct: 170 VDITG-KGKKQRIIPFGKPALASLKQYLPWREKTMQKFSEKHSYIFINTRGRQLTETGAE 228 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ + HPHMLRH+ L GAD R +Q+ LGH ++ T YT Sbjct: 229 YILKQVSKRSKLTANIHPHMLRHSFATHLLNNGADIRTVQELLGHASLSTTQIYTHITTE 288 Query: 178 RFAGLWERNNLINE 191 +++ + Sbjct: 289 NLQENYKKFFDRAK 302 >UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE1_9ACTO Length = 303 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 8/194 (4%) Query: 3 KRRYLTGKEVQAMMQAVCY-----GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 L + + ++ GA+ R++ ++ L Y G+R+SE+ L L+ + Sbjct: 112 LPSPLDESDARVLLNTARDEAAAGGASQIRNWAILELTYACGLRVSEVCALDISSLNRDA 171 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWT-QERANWKGADRTDAIFISRRGSRLSRQQA 116 + + K V P +A++ W + R G +A+F+ +G R+ + Sbjct: 172 LTVRVVG-KGNKERVVPYGPPAADALDHWLVRGRPQLAGERSGNALFLGDKGGRIDPRIV 230 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 ++ AG PH LRH+ L + GAD R +Q+ LGH ++ T RYT + Sbjct: 231 RSMVHKTAARAGVH-DIAPHGLRHSTATHLLQGGADLRAVQEMLGHSSLSTTQRYTHVDT 289 Query: 177 ARFAGLWERNNLIN 190 AR + +++R + Sbjct: 290 ARLSAIYQRAHPRA 303 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 7/195 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCY-----GATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + L + + ++A RD ++ + Y G+R+SEL L D+D + Sbjct: 107 TLPSVLRQDQARDALEAAESGAQQGDPLAVRDRLVVEMLYATGIRVSELCGLDVDDVDTS 166 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQ 115 + + K P A+ W E R AD A+ + RG RL +Q Sbjct: 167 RRLLRVLG-KGNKQRTVPYGEPAHAALTAWLHEGRPALATADSGPALLLGARGKRLDPRQ 225 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A ++ G PH LRH+ L E GAD R++Q+ LGH ++ T YT Sbjct: 226 ARTVVHQTVSAVGGAPDIGPHGLRHSAATHLLEGGADLRVVQELLGHSSLATTQLYTHVT 285 Query: 176 AARFAGLWERNNLIN 190 AR + ++ + Sbjct: 286 VARLRAVHDQAHPRA 300 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L+ E+ ++ + D ++ LAY G+R++EL ++ + L L G IN Sbjct: 118 LPKALSDLEITQLLTLEIPETPRTLGDQAVLELAYASGLRLAELRNIRMEQLHLEVGFIN 177 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDA-IFISRRGSRLSRQQAYRII 120 + K V P+ +A++R+ + R+ A +F++ RG+ + ++ I Sbjct: 178 VIG-KGNKERVVPVGSKAVQALQRYLESGRPKLVTPRSPANVFLTMRGTPFAAVTLWKRI 236 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 +D +G PHMLRH+ L E GAD R+IQ+ LGH NI T YT + +R Sbjct: 237 KDRVKRSGVARNVTPHMLRHSFATHLLEHGADLRVIQELLGHANISTTEIYTHVSGSRLR 296 Query: 181 GLWERNNLI 189 + + + Sbjct: 297 EVHRKFHPR 305 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 4/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 YLT +VQ ++ + G R+ C++ L Y G+RISE ++ QD+ + + Sbjct: 109 PLPEYLTVDQVQDLLDSFDLEDKKGLRNRCIVELLYACGLRISECANIKIQDIHFRDYYV 168 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + P + + + ++ ++ ++ +D F +G +S + ++ Sbjct: 169 RVMG-KESKERIVPFYKELGDLLTKYLKKYGSFSQL--SDPFFKGSKGKAISVRSIQLLL 225 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 G E Q HPH+LRH+ L + GAD R++Q LGH N+ T YT + Sbjct: 226 EKKGRELKLPFQLHPHVLRHSFATHLLDNGADLRIVQSLLGHENLSTTQIYTHVSQDTLR 285 Query: 181 GLWERNNLINEK 192 + + ++ K Sbjct: 286 RVIAETHPLSHK 297 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 7/195 (3%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +T +V ++++ A G RD + Y G RISE+ L + +DL G + Sbjct: 112 LPHTMTDSDVNRLLESCDVSTAAGLRDRAFLEFLYATGARISEVATLRLEQVDLQNGTVR 171 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTD----AIFISRRGSRLSRQQA 116 + K + PL E ++++ + R D+T A+FIS RG+ +S Sbjct: 172 LFG-KGSKERIVPLYESAIEWLKKYLRSSRPTLLLKDKTGRVHSALFISVRGNNMSADSL 230 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 ++ AG + PH +RH EL GAD R++Q+ LGH ++ T YT + Sbjct: 231 RKVFSSYLTAAGLDSSLSPHAMRHTYATELLGGGADLRIVQELLGHESLSTTQVYTHLSV 290 Query: 177 ARFAGLWERNNLINE 191 R + + ++ Sbjct: 291 DRLKEAAKAAHPRSK 305 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 248 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 16/203 (7%) Query: 4 RRYLTGKEVQAMMQAV--------------CYGATGARDYCLILLAYRHGMRISELLDLH 49 R L E A++ + RD L L Y G+RISE L L Sbjct: 172 PRALNVDETFALLDSATGPGGKRGPVAGSAEEERILCRDLALAELLYGSGLRISEALSLD 231 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGS 109 D+ L+ + + K + PL ++ W +ER A+F+ RG+ Sbjct: 232 VDDVQLSSRVLRVMG-KGSRERLAPLSDTSFSCLKAWLEERP-LLALPDEAALFVGARGA 289 Query: 110 RLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTV 169 RL+R++A RI+ AG PH LRH+ L E GAD R +Q+ LGH+ + T Sbjct: 290 RLNRREAARIVERLCRRAGLTFTVSPHSLRHSFATHLLEAGADMRSVQELLGHQRLTTTQ 349 Query: 170 RYTASNAARFAGLWERNNLINEK 192 RYT + +++ + + K Sbjct: 350 RYTQVSLESLMQTYDQAHPRSGK 372 >UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTG9_9BACT Length = 318 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 14/203 (6%) Query: 2 SKRRYLTGKEVQAMMQAV----------CYGATGARDYCLILLAYRHGMRISELLDLHYQ 51 S L+ +++ ++ + +RD ++ + Y G+RI E LD+++ Sbjct: 116 SLPLILSREDISTLLSSPAPYWAQKKGKNNDFMASRDAAILEIIYSGGLRIQEALDINFD 175 Query: 52 DLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERA--NWKGADRTDAIFISRRG- 108 ++L E + I K L ++A+E++ R D +FI+ + Sbjct: 176 QINLEESTLKIFG-KGKKQRTAYLGNPAKQALEQYFACRKNAELNWTSANDPVFINLKDL 234 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 RLS + R ++ PH LRH+ L + GAD R +Q+ LGH N+ T Sbjct: 235 KRLSARSIQRNLKAYLQSCQLPPDITPHKLRHSFATHLLDAGADLRSVQELLGHENLSTT 294 Query: 169 VRYTASNAARFAGLWERNNLINE 191 YT + R +++ + + Sbjct: 295 QIYTHISTDRLLQAYDQAHPHAQ 317 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 4/191 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + EV +++++ G R+ ++ L Y GMR+SEL DL + LDL G I Sbjct: 105 KLPEFFYQDEVGQVIRSLNDGKPLTVRNRAIVALFYATGMRLSELTDLKIKQLDLENGMI 164 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRGSRLSRQQAYR 118 + K + ++ +E + Q K T A+F+++ G +S + + Sbjct: 165 LVHG-KGNKDRYVFFDQESKKYLEEYLQAARPSLLKNEPDTGAVFLNKLGRPISSRGIAK 223 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 ++ +AG HPH LRH+ + GAD R +Q+ LGH ++ T YT + Sbjct: 224 AVQQIFQKAGLTAGAHPHELRHSFATAMLNNGADLRSVQELLGHEDLSTTQIYTHVSMQH 283 Query: 179 FAGLWERNNLI 189 + ++ Sbjct: 284 LTVEYRQHFPR 294 >UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W041_9ACTO Length = 302 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 8/194 (4%) Query: 3 KRRYLTGKEVQAMMQ-----AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNE 57 + L+ +++ + A RD+ L Y G+R++EL+ L+ +D + Sbjct: 111 LPQVLSLEQINQLFNHLVETAQTGNVNAIRDWATSELLYSCGIRVAELVGLNLTSVDGSN 170 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQA 116 + + K + P E++ W + R A+F+ RG R+ ++ Sbjct: 171 RTLRVIG-KGNKERLVPFGTPALESLRAWVTQGRPQLVNERSGQALFLGSRGGRIDQRIV 229 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 + A ++AG PH LRH + E GAD R +QD LGH ++ T RYT +A Sbjct: 230 RECLEKACVQAGVPV-LSPHGLRHCAATHMLEGGADLRTVQDMLGHASLATTQRYTHVDA 288 Query: 177 ARFAGLWERNNLIN 190 R + + + + Sbjct: 289 VRLSNIMRQAHPRA 302 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 248 bits (635), Expect = 7e-65, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 22/211 (10%) Query: 2 SKRRYLTGKEVQAMMQAVC----------------YGATGARDYCLILLAYRHGMRISEL 45 + L+ EV +M ++ RD L+ Y G R+SE Sbjct: 109 TLPDVLSVDEVMRLMDSIPLSRHHDGKQGHGDAAADDPVMLRDKALLEFMYATGSRVSEA 168 Query: 46 LDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANW----KGADRTD 100 + D+DL++ + K + P+ EA+ R+ + R KGA Sbjct: 169 CGVDLDDIDLDDKVARLMG-KGSKQRLVPVGSFACEALRRYLRFGRPVLQSKSKGAAEHR 227 Query: 101 AIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYL 160 A+F+++RG RLSRQ + IIR AG A HPH LRH+ L + GAD R +Q+ L Sbjct: 228 AVFLNKRGKRLSRQSVWEIIRTAGERAHITKPLHPHTLRHSFATHLIQGGADVRTVQELL 287 Query: 161 GHRNIRHTVRYTASNAARFAGLWERNNLINE 191 GH ++ T YT + + + Sbjct: 288 GHASVTTTQIYTHVSPENLIEAYLTAHPRAR 318 >UniRef50_C6NUW8 Site-specific recombinase XerD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUW8_9GAMM Length = 308 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 3/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + EV A++ A G RD ++ Y G+R+SEL+ L LDL G + Sbjct: 120 LPAVPSEGEVDALLAAPDRRTVLGLRDAAMLETLYATGLRVSELVGLLCSQLDLEAGVVL 179 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRII 120 K + P+ E + R+ +E R G ++ A+F++ RG +SRQ+ ++ I Sbjct: 180 TLG-KGSKERLIPVGEVALETLHRYLREARGALLGHKQSPALFLTVRGEAMSRQRFWQTI 238 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + +AG + PH LRHA L + GAD R +Q LGH + T YT AR Sbjct: 239 KAHATKAGIRSAFSPHSLRHAFATHLLDHGADLRSVQLMLGHAQLNTTEIYTHIAQARLQ 298 Query: 181 GLWERNNLI 189 L +++ Sbjct: 299 NLHRQHHPR 307 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGA-------RDYCLILLAYRHGMRISELLDLHYQDLD 54 +L +V ++ ++ GA A R++ L Y G+R+SEL + D+D Sbjct: 125 KIPSFLGVDDVFHLLDSLNAGAARAGASWRRCRNWALFECMYSTGVRVSELAGMDESDVD 184 Query: 55 LNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERAN--WKGADRTDAIFISRRGSRLS 112 +EG + + K + P+ +AV+ + + + + A+F + RG RL+ Sbjct: 185 FHEGMVRVLG-KGSKERIVPVGGKALDAVKLYLRVLDSQFPEARRMGSALFRNARGRRLT 243 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 + +R++R G PH LRH L GAD R IQ+ LGH N+ T RYT Sbjct: 244 TRSVHRLLRMELRRCGLWQHLSPHGLRHTFATHLLNSGADLRAIQEMLGHSNLSTTQRYT 303 Query: 173 ASNAARFAGLWERNNLINEKLK 194 + + +++ + + + + Sbjct: 304 HVHVDQLMKVYDAAHPRSRRDR 325 >UniRef50_C8PV23 Tyrosine recombinase XerC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV23_9GAMM Length = 345 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 8/197 (4%) Query: 2 SKRRYLTGKEVQAMMQAVC-----YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 L + ++ RD ++ L Y G+R+ EL+ L+ D+D + Sbjct: 151 PLPTLLDIDVLSQLLDQAAPEDSHEARLWIRDKAMLELLYGSGLRVGELVGLNMSDIDKS 210 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRR-GSRLSRQQ 115 + + + K G + + P+ +A+ + R + ++ A+F+S R G+R+S + Sbjct: 211 QRLLRVLG-KGGKTRIVPIGEKAWQALINYLPHR-SLWVEEQDPAVFVSERYGTRISTRT 268 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 I+ AG +PH+LRH + D R +Q+ LGH +I T YT + Sbjct: 269 VQLRIKLQAKRAGVAQDLYPHLLRHCFASHILSDSGDLRGVQELLGHSDISTTQIYTHLD 328 Query: 176 AARFAGLWERNNLINEK 192 + ++++ + + + Sbjct: 329 FGHLSQVYDKAHPRSRR 345 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 3/190 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 R L ++ A+M + + RD L+ + Y G+R+SE + L D+DL+ + + Sbjct: 109 LPRTLPPEQTAALM-QPTHASADRRDLALLAVMYGAGLRVSEAVGLDLHDIDLHSCELRV 167 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 K + PL + + +W ER A+F++R G RL+ + R+++ Sbjct: 168 LG-KGSKQRIVPLPTTAADLLGQWLDER-LLGLVRDERAVFLNRFGQRLTARSVQRMLKT 225 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 +E+G PH LRH+ L G D R IQ+ LGH ++ T RYT + A+ + Sbjct: 226 RALESGADISVTPHRLRHSFATHLLAGGVDLRAIQELLGHASLATTERYTHLDIAKLTEV 285 Query: 183 WERNNLINEK 192 ++R++ + Sbjct: 286 YDRSHPRAGR 295 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 5/196 (2%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L A++ + ARD + L Y G+R+SE + L+ D+D ++ + Sbjct: 103 LPKALPVDGTAALLDRIEGESELDARDRAIFELVYSCGLRLSETVALNLDDVDFSDSLLR 162 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 IR K G + P+ + + W ER A+F+ R G RL +Q + +R Sbjct: 163 IRG-KGGKERLVPIGAEAMLRLRTWLGER---SAGMDEPALFLGRHGHRLGGRQVEKRLR 218 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 D I+ G HPHMLRH+ + + D R +Q+ LGH N+ T YTA + A Sbjct: 219 DWAIKTGAGQHVHPHMLRHSFASHMLQSSGDLRAVQELLGHANLSSTQIYTALDFQHLAK 278 Query: 182 LWERNNLINEKLKREE 197 +++ + K + + Sbjct: 279 VYDGAHPRARKRGKPD 294 >UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium RepID=XERC_MYCSK Length = 300 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 7/195 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCY-----GATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + L + + + A RD ++ + Y G+R+SEL L D+D + Sbjct: 107 TLPAVLRQDQARDALDAANSGAQQGDPLALRDRLIVEMLYATGIRVSELCGLDIDDVDTS 166 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQ 115 + + K P +A+ W R A+ A+ + RG RL +Q Sbjct: 167 RRLLRVLG-KGDKQRTVPFGEPAEQALRAWLTSGRPALATAESGPALLLGARGRRLDPRQ 225 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A ++ + PH LRH+ L E GAD R++Q+ LGH + T YT Sbjct: 226 ARTVVHETVGAVAGAPDIGPHGLRHSAATHLLEGGADLRIVQELLGHSTLATTQLYTHVT 285 Query: 176 AARFAGLWERNNLIN 190 AR + ++ + Sbjct: 286 VARLRAVHDQAHPRA 300 >UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6I8_9ACTN Length = 342 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 73/198 (36%), Gaps = 10/198 (5%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ ++ ++ G RD L+ L Y G RISE L D+ + ++ Sbjct: 146 TLPHVLSESSIEKLLATCQEDTVCGLRDRALLELLYATGCRISEAAHLCVSDISFDSKQV 205 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDA-------IFISRRGSRLS 112 + K + P+ + + + R + A +FIS RG +S Sbjct: 206 RLFG-KGSKERIVPIYPECARILHMYLTTARPVLLSKQKNQAQAQTNQHVFISTRGKAMS 264 Query: 113 RQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 Q + + PH +RH+ EL GAD R +Q+ LGH ++ T YT Sbjct: 265 DQALRYVFEHYMRLSHLQEIATPHTMRHSFATELLSHGADLRSVQELLGHASLATTQIYT 324 Query: 173 ASNAARFAGLWERNNLIN 190 + R N Sbjct: 325 HVSVNALKDAARRANPRA 342 >UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga RepID=C7M6X5_CAPOD Length = 307 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 5/198 (2%) Query: 2 SKRRYLTGKEVQAMMQ--AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + E++ ++ + R+ +I Y G+R SEL L D+D + + Sbjct: 112 KLP--FSEAEIEKVLSFFSSKDSFDEVRNRAVIETLYATGIRRSELSGLKVSDVDFEQKQ 169 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 I + K P+ + ++ + R K D +F+ + G ++ YRI Sbjct: 170 IKVLG-KGDKERYIPIIPELENTLKEYLVLREEVKNEKSQDYLFLVKNGKKIYSTLVYRI 228 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I T PH+LRH+ L + GAD +++ LGH ++ T YT ++ A Sbjct: 229 INSYFSVVTTKKDVSPHVLRHSFASHLLDNGADLYTVKELLGHSSLASTQVYTNTSLAEL 288 Query: 180 AGLWERNNLINEKLKREE 197 +++ + + EE Sbjct: 289 KKQYKKAHPRAKGNSNEE 306 >UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE10_9GAMM Length = 292 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 6/193 (3%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 S + L + + M+ + RD ++ + Y G+R+SEL+ L +D+D ++G + Sbjct: 106 SLPKTLDYERLVQMLTPKSSAFSELRDAAMVEVLYSCGLRVSELVGLDIEDVDASQGFLR 165 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K PL ++++ R+ Q K + A+F++ R R+S + II+ Sbjct: 166 VMG-KGSKVRYTPLGESAQKSINRYLQ-----KTSHTNKALFVNNRQERISTRTVQNIIK 219 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + + G HPHMLRHA + D R +Q++LGH++I+ T YT + + Sbjct: 220 NRALSVGIKVNVHPHMLRHAAATHFLQSSHDLRSVQEFLGHKSIKSTQVYTHLDFLELSK 279 Query: 182 LWERNNLINEKLK 194 ++++ + +K Sbjct: 280 VYDKCHPRAKKSS 292 >UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepID=D0W8E1_NEILA Length = 334 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 6/194 (3%) Query: 4 RRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L + + M+ RD+ L L Y G+R+SE+ L+ D+ L+E ++ Sbjct: 145 PKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDVYLDEAWVH 204 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K PL EA++ + R A A+F R G+RLS++Q + + Sbjct: 205 VTG-KGRKQRQVPLTGKSAEALKNYLPLRQT---ASDGKALFTGRNGTRLSQRQIQKRLA 260 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 G PHM+RH+ L + D R +Q+ LGH ++ T YT + A Sbjct: 261 QWAAINGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIAR 320 Query: 182 LWERNNLINEKLKR 195 L++ + ++ ++ Sbjct: 321 LYDEAHPRAKRQEK 334 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 6/171 (3%) Query: 4 RRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + ++ +EV ++ A G RD ++ + YR G+R+SEL+ L+ D++L+E + Sbjct: 115 PKAISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDDINLDESHLK 174 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 G + PL + ++ + + R A+F++ RG RL+RQ + I+ Sbjct: 175 CIGR--GKTRKVPLSQPAVDVLKLYLERSRPLLVRGQDEQALFVNHRGQRLTRQGFWLIL 232 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRY 171 + EAG PH LRH+ + + G D R +Q++LGH +I T Y Sbjct: 233 KAYASEAGI-KGITPHTLRHSFAAHMIDGGIDLRQVQEWLGHASITTTQVY 282 >UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium RepID=Q6A7J6_PROAC Length = 315 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 7/194 (3%) Query: 3 KRRYLTGKEVQAMMQAV------CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 L + + ++ GARD ++ + Y G+R+ EL L D+D + Sbjct: 123 LPATLGVDQARHILDEAVAQARHDESPHGARDAAILEVLYGGGLRVGELCGLDLGDVDRS 182 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQA 116 + + K P+ A++ W R W G A+F+ RG R+ ++ Sbjct: 183 RRTVKVTG-KGDKERTVPMGAPALRAIDTWLPRREEWVGPHSGQALFLGARGRRIDQRVV 241 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 R++ PH LRHA L E GAD R +QD LGH ++ T YT + Sbjct: 242 RRVVHTDLRAEPDSPDLGPHGLRHAMATHLLEGGADLRTVQDILGHESLATTQIYTHVST 301 Query: 177 ARFAGLWERNNLIN 190 R + + + Sbjct: 302 ERLRTAFRQAHPRA 315 >UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0D4_HALNC Length = 329 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 2/190 (1%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + + ++ RD C+ L Y G+R++EL+ L D+D +EG Sbjct: 118 KLPDAPAIETMNQLLDQPMVEDELLIRDRCMFELIYSSGLRVAELVRLDVHDIDRSEGIA 177 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + P+ + V W R A+F++RRG RL+ + + Sbjct: 178 RVTG-KREKTRLVPVGGKALDRVALWLPIRKTLLKDTTEPALFLNRRGQRLTIRSVQMRL 236 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + HPH LRHA + E D R +Q+ LGH ++ T YT + R A Sbjct: 237 NRLAQQTHLGQTLHPHQLRHAFATHVLESSGDLRAVQEMLGHESLSTTQIYTHLDFQRLA 296 Query: 181 GLWERNNLIN 190 ++E + Sbjct: 297 QVYESAHPRA 306 >UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD8_WEIPA Length = 308 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 6/195 (3%) Query: 3 KRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 RY KE+ M V A G R++ L+ + Y G R+SE+ ++ Q++D + + Sbjct: 115 LPRYFYQKELTKMFDVVMTDQSALGLRNHLLLEMLYGTGARVSEIANMTLQNVDSHARVV 174 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQE-RANW--KGADRTDAIFISRRGSRLSRQQAY 117 I K + + P +A+ ++ + R K AD ++ +F+++RG+ ++ Sbjct: 175 TITG-KGNKTRIVPFGRYAADALAKYLKTGRPVLASKQADTSNKLFLNQRGAPVTTAGIE 233 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ G ++G + HM RH +L AD R +Q LGH ++ T YT Sbjct: 234 YILKQIGKKSGLTQEVTAHMFRHTFATDLLNNQADLRTVQQLLGHSSLSTTQIYTHVTTD 293 Query: 178 RFAGLWERNNLINEK 192 + + Sbjct: 294 ALQKSYRNFFPRASE 308 >UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHX4_HALO1 Length = 395 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 8/181 (4%) Query: 21 YGATGARDYCLILLAYRHGMRISELLDLHYQDLD---LNEGRINIRRLKNGFSTVHPLRF 77 RD + + Y G+R+ E L D+D L+ + +RR K G + PL Sbjct: 184 REPLKLRDRAIAEVLYGSGLRVGECCALDLDDIDRARLSSALVRVRRGKGGKERIVPLGR 243 Query: 78 DEREAVERWTQERANWK----GADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQT 133 A++ + R + GA A+F+S RG+RL+ + R+I E G + Sbjct: 244 QAVAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRMIGRNAQEVG-AYEA 302 Query: 134 HPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKL 193 PH LRH+ L + G D R IQ+ LGH ++ T YT + +++ ++ Sbjct: 303 TPHALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKVSLDHLMNVYDASHPRARAS 362 Query: 194 K 194 Sbjct: 363 S 363 >UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FAZ0_SORC5 Length = 358 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 9/199 (4%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDL---NE 57 +L +M+ A G RD ++ Y G+R+SEL L +D + Sbjct: 157 PLPTFLDVDAAAEVMEIPGAETAEGLRDRAMLETLYGAGLRVSELCGLDLTHVDRRPADR 216 Query: 58 GRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWK----GADRTDAIFISRRGSRLSR 113 + + K + PL A+ER+ + R GA A+F+SRRG+R+ Sbjct: 217 AAVRVVG-KGDKERIVPLGSHALAAIERYLERRDELADPTTGARDPRALFLSRRGARIGV 275 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 ++ +++ G HPH LRH C L + GAD R IQ LGH ++ T RYT Sbjct: 276 RRVQALVQRYGALGAGRADLHPHALRHTCATHLLDGGADLRAIQKLLGHASLATTQRYTH 335 Query: 174 SNAARFAGLWERNNLINEK 192 + +++ + + K Sbjct: 336 VSIDHLLKVYDAAHPMARK 354 >UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CAFB Length = 297 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 2/197 (1%) Query: 2 SKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + L+ +E+ +++++ G R+ ++LL GMRISEL+ L D++ + + Sbjct: 102 KLPKVLSLEEIIKVIKSIDDSNPAGKRNKAMMLLLINTGMRISELVHLEINDINHSVSNV 161 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 ++ K + PL + V + Q ++ +F+ G R++R+ Y I+ Sbjct: 162 SVVG-KGNKERLIPLDEETCSYVYSYMQNDRSFFNKKNNQWLFMMNDGRRMTRENFYNIL 220 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + I AG PHMLRH L E D R IQ LGH++I T YT + Sbjct: 221 QKLVIGAGVRDHFTPHMLRHTFATTLLENHCDLRSIQVMLGHQDISTTTIYTHVTHRQIL 280 Query: 181 GLWERNNLINEKLKREE 197 + + + N + K++E Sbjct: 281 DDYNKYHPGNARRKKDE 297 >UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Proteobacteria RepID=Q1LSD3_RALME Length = 369 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 17/210 (8%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-GARDYCLILLAYRHGMRISELLDLHY---QD----- 52 + L+ + A++ RD + L Y G+R+SEL+ L +D Sbjct: 134 PLPKALSVEHAVALVAHRQDDTNESLRDQAVFELFYSSGLRLSELIQLDVRYTEDGDYRS 193 Query: 53 ---LDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGA----DRTDAIFIS 105 LDL+ + + K P+ +A++ W R + A+F+ Sbjct: 194 SGWLDLDGAEVTVLG-KGSRRRTVPVGSKAIQALKAWIHVREMMLRPGALPEDAHALFLG 252 Query: 106 RRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNI 165 RG RL + I+ + AG + HPHMLRH+ + + D R +Q+ LGH +I Sbjct: 253 TRGRRLPISTVQQRIKRQALAAGVPSDVHPHMLRHSFATHMLQSSGDLRAVQEMLGHASI 312 Query: 166 RHTVRYTASNAARFAGLWERNNLINEKLKR 195 T YT+ + A ++++ + + + Sbjct: 313 STTQIYTSLDFQHLAKVYDQAHPRAGRASK 342 >UniRef50_Q31IL8 Tyrosine recombinase XerC subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31IL8_THICR Length = 317 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 4/193 (2%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQ-DLD-LNEGRI 60 + L + +++ RD + + Y G+R+SEL++L LD L G + Sbjct: 126 LPKSLDVDLTRQLLEQPLKTWQDVRDQAIFEILYSGGLRVSELVELDLSPGLDGLASGWV 185 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K P+ ++A+ RW + R+++ A+F++R G RL + + Sbjct: 186 RVLG-KGQKERDAPVGQPAQKALHRWLEIRSDYAQ-PGEQAVFVNRFGKRLGVRSIQTQL 243 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 ++AG T+ PH LRHAC + E D R +Q+ LGH N+ T YT + A Sbjct: 244 DKRTLQAGLPTKMSPHRLRHACATHVLESSGDLRAVQEMLGHANLSTTQIYTKLDLQHLA 303 Query: 181 GLWERNNLINEKL 193 ++++ + +K Sbjct: 304 TVYDKAHPRAKKK 316 >UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECJ8_9ACTN Length = 220 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 10/198 (5%) Query: 3 KRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT ++V+A+++ G RD ++ L Y G RISEL L+ + + +E + Sbjct: 24 LPGVLTTQQVEALLKTPDTSTPAGLRDAAMLELLYASGARISELAALNVESIGWSERTLR 83 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADR-------TDAIFISRRGSRLSR 113 + K + PL EA + +E R + + IS RG+R+S Sbjct: 84 LWG-KGSKERIVPLYRRALEATRLYIEEGRPELLAQAKRRDPATGPHPLLISARGNRMSA 142 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 R AG PH +RH +L E GAD R +Q+ LGH ++ T YT Sbjct: 143 AMLRRRFHTLATLAGIPADIAPHAMRHTFATDLLEGGADLRSVQELLGHASLSTTQIYTH 202 Query: 174 SNAARFAGLWERNNLINE 191 R + + E Sbjct: 203 LTPDRLKRAVAQAHPRGE 220 >UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEBB Length = 304 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 11/191 (5%) Query: 3 KRRYLTGKEVQAMMQAV--CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ ++V+ ++ V A ARD ++ L Y GMR+ EL D++ + I Sbjct: 122 LPEVLSPEKVEEAIEKVSSEDSAVAARDLAIVELLYATGMRVEELCKADVSDVNFSRHII 181 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG-ADRTDAIFISRRGSRLSRQQAYRI 119 ++ K + P A++ W Q R N+ A A+F+ RG RL+ +QA R+ Sbjct: 182 SVVG-KGDKQRIVPFGAPAEAALKGWLQVRGNFPASAQAEHALFLGVRGGRLNPRQARRV 240 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I PH LRH+ + E GAD R++Q+ LGH ++ T YT +A R Sbjct: 241 IHKWA-------DVSPHALRHSAATAMVEGGADLRVVQEMLGHSSLATTQIYTHVSADRL 293 Query: 180 AGLWERNNLIN 190 + +R + Sbjct: 294 REVHKRAHPRA 304 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 3/173 (1%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 R L+ L Y G RISE + L DLDL + + K G + PL Sbjct: 242 PAEAVRRLRATALLELLYGTGARISEAVGLDVDDLDLEAASVRLHG-KGGRDRIVPLGRY 300 Query: 79 EREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHM 137 AV + + R A+F+SRRG+RLSRQ A+ ++R A + AG PH+ Sbjct: 301 AIAAVADYLRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVLRTAALAAGVEG-VSPHV 359 Query: 138 LRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 LRH+ L + GAD R++Q+ LGH ++ T YT R ++ ++ Sbjct: 360 LRHSFATHLLDGGADVRVVQELLGHASVSTTQIYTLVTVDRLREVYAASHPRA 412 >UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae RepID=D1B5G4_THEAS Length = 297 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 9/192 (4%) Query: 2 SKRRYLTGKEVQAMMQA-VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 LT EV +++A RD +I L Y G+R SEL L +DLDL+ G + Sbjct: 111 PMPAILTEGEVLRLLEATAGDAPGDLRDRAMIELLYGCGLRASELCSLTMKDLDLSSGTV 170 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +R K V PL + R A+ER+ + R +G IF RG R+ +++I Sbjct: 171 RVRG-KGDKVRVLPLVGETRSALERYLKVRGTHQG-----PIFQGDRGGPFRREMLWKMI 224 Query: 121 RDAGIEAGTV-TQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 + G +A ++ HPH+LRH+C L RG D R +Q LGH ++R T YT + Sbjct: 225 QRRGRQACIAASRLHPHILRHSCATHLLRRGMDLRTLQCLLGHSSVRTTEVYTHFDLE-L 283 Query: 180 AGLWERNNLINE 191 +++R++ + Sbjct: 284 RDVYDRSHPRAQ 295 >UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX82_METI4 Length = 280 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 21/203 (10%) Query: 3 KRRYLTGKEVQAMMQAVC---------------YGATGARDYCLILLAYRHGMRISELLD 47 RYL+ ++VQA++ A RD + Y G+R+ EL Sbjct: 84 LPRYLSLEQVQALLNAPQKKWEKEKEKGKKSRWNEWQWKRDQAWLETLYGAGLRVGELSS 143 Query: 48 LHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRR 107 L ++ ++ + + K L ++ + + ++ +F+S R Sbjct: 144 LKRKNFFPSDLALLVEG-KRKKERYCILGEVATASLCSYLESCPF-----ESEFLFVSSR 197 Query: 108 GSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRH 167 G L+ + +++ AG PH LRH L E GAD R IQ+ LGH ++ Sbjct: 198 GKPLTPRFFQLSLKEYLAIAGLDQSISPHKLRHTFATHLLEGGADLRSIQELLGHAHLST 257 Query: 168 TVRYTASNAARFAGLWERNNLIN 190 T YTA +A + R + Sbjct: 258 TQIYTAVSAEHLKESYFRTHPRA 280 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 9/200 (4%) Query: 2 SKRRYLTGKEVQAMMQAVC--YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 + L+ +EV A++ A R CLI +AY GMR+SE++ L + + Sbjct: 106 PLPKILSRQEVDALIAAADAKDAHQATRLQCLIEIAYASGMRVSEIVALRLDAVQKDPAY 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADR--TDAIFISRRG--SRLSRQQ 115 + ++ K G + PL R A++ + R + A +F S RG L+R++ Sbjct: 166 LIVKG-KGGTERLVPLNPSARAAIKDYLDIRPLFLNAKDKANPYLFCS-RGAEGHLTRRR 223 Query: 116 AYRIIRDAGIEAGT-VTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 +++ +A +EAG + PH+LRHA L E GAD R++Q LGH +I T YT Sbjct: 224 VGQLLDEAALEAGIDPARVSPHVLRHAFATHLLEGGADLRVVQTLLGHADISTTQVYTHV 283 Query: 175 NAARFAGLWERNNLINEKLK 194 R + E ++ ++++ Sbjct: 284 ATERLKEVVETHHPLSKRRA 303 >UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW74_9BACT Length = 314 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 3/195 (1%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L +E+ +++A G RD ++ Y G+R+SEL +L L+LNE +I Sbjct: 107 LPGVLDEEEILRLLEAPDPKTDEGIRDRAILATFYASGLRVSELAELTLDRLNLNEEQIR 166 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K V L ++ + ER +F++RR + +RQ + +I+ Sbjct: 167 VTG-KGQKERVAFLDGLSCARLKLYL-ERVRPSTNTAEKTLFLTRRQTGFTRQGLWLLIK 224 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G PH LRH+ L G D R IQ LGH +I+ T YT + A Sbjct: 225 GYARQCGIDRSVSPHTLRHSFATHLLSHGMDIRSIQILLGHSDIQTTEIYTHVDIRMLAE 284 Query: 182 LWERNNLINEKLKRE 196 + + ++ +++ Sbjct: 285 DLAKYHPRGKRPEKD 299 >UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia RepID=XERC_PELTS Length = 306 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 7/195 (3%) Query: 3 KRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 R+L E + +++A G RD L+ Y G+RISEL+ L DLD++ G I Sbjct: 112 LPRFLYEDEAKELVEAPDTKQPLGMRDRALLETLYAGGLRISELVLLDLGDLDISSGYIR 171 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWT-QERANWKG----ADRTDAIFISRRGSRLSRQQA 116 + K + PL EA++ + + R +A+F++ RG RLS + Sbjct: 172 VTG-KRARERLVPLGSMAVEALQAYLAKARPRLMANSVAKKINNALFLNCRGERLSARGI 230 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 +I+ + + PH LRH+ L GAD R +Q+ +GH + T YT Sbjct: 231 RKILDKYVEKVSLERKISPHTLRHSFATHLLNAGADLRSVQELMGHVRLSSTQVYTHVTG 290 Query: 177 ARFAGLWERNNLINE 191 R ++ +++ + Sbjct: 291 ERLKKVYRKSHPRAK 305 >UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510416 Length = 319 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 13/200 (6%) Query: 3 KRRYLTGKEVQAMMQA------------VCYGATGARDYCLILLAYRHGMRISELLDLHY 50 L ++ ++ RD ++ + Y +R+SEL L+ Sbjct: 121 LPTVLKPQQAADLVSRQRTVHTEADNSDPIEATKWVRDAAILEMLYATAVRVSELTGLNR 180 Query: 51 QDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSR 110 D+D I + K P + A+++W R + DA+F+ RG R Sbjct: 181 GDVDHQRSMITVLG-KGNKERRVPYGKPAQTALQKWLSLRDTFASESSGDALFLGVRGGR 239 Query: 111 LSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVR 170 + +Q ++ G + PH LRH+ + + GAD R IQ+ LGH + T Sbjct: 240 IGARQVRELVHRYGAADPSAPDIGPHGLRHSAATHMLDGGADLRQIQELLGHSTMSSTQI 299 Query: 171 YTASNAARFAGLWERNNLIN 190 YT + R + + + Sbjct: 300 YTHVSMQRLQETYRQAHPRA 319 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 17/207 (8%) Query: 3 KRRYLTGKEVQAMMQAVCYGATG----------------ARDYCLILLAYRHGMRISELL 46 R + ++ ++ RD L+ L Y G+RISE Sbjct: 113 LPRAPSVEQTLNLLDKSTPRPLSPEASDFDTSAWAVLRSLRDTALLELLYSAGLRISEAC 172 Query: 47 DLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQER-ANWKGADRTDAIFIS 105 +L D+DL G + +R K G + PL A+E W Q R D IF Sbjct: 173 NLDRADVDLRGGELRVRHGKGGKQRMVPLGRTAVAAIEAWLQARTRAKPQLDPMGPIFTG 232 Query: 106 RRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNI 165 + G RL+ ++ R++ PH LRHA L + GAD R IQ+ +GH ++ Sbjct: 233 QLGKRLNSREGQRLLEKWRARLDLPESVTPHALRHAFATHLLQAGADLRAIQEMMGHASL 292 Query: 166 RHTVRYTASNAARFAGLWERNNLINEK 192 T +YT + A +++ + ++ Sbjct: 293 SATQKYTHLDMQALAKVYDAAHPRAQR 319 >UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI00019772C5 Length = 334 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 86/230 (37%), Gaps = 43/230 (18%) Query: 2 SKRRYLTGKEVQAMMQAVCYGAT-----------------------------------GA 26 + LT + + +M V A+ Sbjct: 107 TLPSVLTEAQAERLMDRVDDDASLHAASSQRYETRHDEMPRLDSAHRGEGMSQRDEVVAL 166 Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD ++ L Y G+R++EL+ L D+D + I + K V P +A+ W Sbjct: 167 RDAAMLELLYATGIRVAELVGLDIGDVDWSHRTIRVTG-KGSKQRVVPFGDPAEKALAGW 225 Query: 87 ------TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRH 140 R G T A+F+ RG R+ ++ ++ A E+G PH LRH Sbjct: 226 KEHGRPLILRRAGAGTLDTAALFLGMRGRRIDQRIVRDVVHRAARESGVP-DISPHSLRH 284 Query: 141 ACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 + + + GAD R +Q+ LGH ++R T RYT + + + + Sbjct: 285 SAATHMLDGGADLREVQEMLGHSSLRTTQRYTHVSIEQLKERYRQAFPRA 334 >UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales RepID=XERC_CHLFF Length = 312 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 2/187 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 +T ++V+ +M TG RD CL+ L Y G+RISE++ L++ D+D N I Sbjct: 125 LPSPITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVSLNHWDIDFNSNLIR 184 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 IR K + P+ + ++++ A + AIF++ G+RL+ + R + Sbjct: 185 IRG-KGKKERIIPITTLAAQWLKQYLNHPERAGVAKDSQAIFLNCFGTRLTTRSIDRKFQ 243 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 +G PH +RH E G D + IQ LGH ++ T YT + Sbjct: 244 KYLRLSGLSGNITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSMKLKKQ 303 Query: 182 LWERNNL 188 ++ Sbjct: 304 THNESHP 310 >UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacteria RepID=Q1IMN8_ACIBL Length = 313 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 11/200 (5%) Query: 3 KRRYLTGKEVQ-------AMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDL 55 + L+ EV ++ A RD ++ + Y +R+SE++ + +D L Sbjct: 112 LPKSLSADEVLQTLQGPPRVLDTKESQALALRDRAMLEVFYAGALRVSEMIGVRMEDAKL 171 Query: 56 NEGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQ 114 + G + +R K + PL AV+ + + R + +F+ + +LSRQ Sbjct: 172 DLGYMMVRG-KGDKERIVPLGQSALVAVKSYLESGREVLCAGKTSPILFVGKGCRKLSRQ 230 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 + ++++ A +G PHMLRH+C + E GAD R +Q LGH +I T YT Sbjct: 231 RVWQMVSAASQASG--RHASPHMLRHSCATHMVENGADLRTVQTILGHADISTTQIYTHL 288 Query: 175 NAARFAGLWERNNLINEKLK 194 R + + +++ Sbjct: 289 ALDRLKQVHRTFHPRSKRRN 308 >UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=C0AAZ7_9BACT Length = 329 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 12/197 (6%) Query: 3 KRRYLTGKEVQAMMQAVCY---------GATGARDYCLILLAYRHGMRISELLDLHYQDL 53 ++LT ++++ ++ T RD + L Y G+R+SEL L Y + Sbjct: 136 LPKFLTEQQMKLLLSGPQRLLDNVADITPFTAWRDRLAMELLYGGGLRVSELTALDYGQI 195 Query: 54 DLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSR 113 D G + K + PL + +W E A + ++ R+ Sbjct: 196 DFTSGVARVLG-KGRKERLCPLGKVALAVLVKWKNEYAR--DTSPAAPVLVTPEHERMPV 252 Query: 114 QQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTA 173 +Q +++ AG T PH LRH+ L GAD RL+Q+ LGH ++ T YT Sbjct: 253 RQVQLMLKRYLALAGLPTDLSPHKLRHSYATHLLNAGADLRLVQELLGHASLNTTQIYTH 312 Query: 174 SNAARFAGLWERNNLIN 190 + AR ++++ + Sbjct: 313 VSIARLRDIYDKAHPRA 329 >UniRef50_A1KS31 Tyrosine recombinase xerC n=25 Tax=Neisseriaceae RepID=XERC_NEIMF Length = 305 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 4 RRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + L + + M+ RD+ L L Y G+R+SE+ L+ D+ L+E ++ Sbjct: 116 PKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDVYLDEAWVH 175 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K PL EA++ + R A A+F R G+RLS++Q + + Sbjct: 176 VTG-KGRKQRQVPLTGKSVEALKNYLPLRQT---ASDGKALFTGRNGTRLSQRQIQKRLA 231 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + G PHM+RH+ L + D R +Q+ LGH ++ T YT + A Sbjct: 232 QWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIAR 291 Query: 182 LWERNNLINEKLKR 195 L++ + ++ Sbjct: 292 LYDEAHPRAKRRDE 305 >UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepID=XERC_CHLT2 Length = 315 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 2/189 (1%) Query: 3 KRRYLTGKEVQAMMQAVCYGA-TGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT ++V A+M A TG RD CL+ L Y G+RISE+ L+ D+D ++ Sbjct: 125 LPSPLTYEQVLALMAAPELDKVTGFRDRCLLELFYSSGLRISEITALNRADIDFQSHLLH 184 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 IR K + P+ + ++ + A F++R G RLS + R + Sbjct: 185 IRG-KGKKERIVPMTKVAVQWLQDYLNHPDRASVEQDHQACFLNRFGKRLSTRSIDRKFQ 243 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 ++ G PH +RH ERG D + IQ LGH ++ T YT + Sbjct: 244 QYLLKTGLSGSITPHTIRHTIATHWLERGMDLKTIQLLLGHTSLETTTIYTHVSMKLKKQ 303 Query: 182 LWERNNLIN 190 + + + N Sbjct: 304 IHDETHPHN 312 >UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8T8_9ACTN Length = 308 Score = 242 bits (618), Expect = 6e-63, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 8/194 (4%) Query: 3 KRRYLTGKEVQAMMQAVCYG-ATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 LT +E+ A+ A G RD ++ L G RISEL L D+ + E ++ Sbjct: 115 LPHVLTAEELAALFDAPDLSCPVGLRDAAMLELFIATGARISELSRLELGDVCVAERQVC 174 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ------ERANWKGADRTDAIFISRRGSRLSRQQ 115 + K + PL E ER+ + RA G D A+F+S RG ++ Sbjct: 175 LLG-KGSKERIVPLYARAIEVYERYLENGRPNLLRAPALGGDACRAVFVSDRGRAMNSDA 233 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 +AG + PH +RH EL GAD R +Q+ LGH ++ T YT Sbjct: 234 LRYRFDVLKRKAGISSDITPHAMRHTFATELLGGGADLRSVQELLGHASLSTTQIYTHLT 293 Query: 176 AARFAGLWERNNLI 189 R R + Sbjct: 294 PDRLKSAVARAHPR 307 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 7/197 (3%) Query: 3 KRRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 R LT ++V +++ RD ++ L Y G+R+SEL+ L+ D+DL + Sbjct: 107 LPRALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVDLERNEV 166 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG---ADRTDAIFISRRGSRLSRQQAY 117 KNG V P+ A+E + N T+A+F++ RG RL+RQ + Sbjct: 167 RCIG-KNGRVRVLPINGSAATALEEYFDISRNQLARGSGSSTEALFLNHRGKRLTRQGFW 225 Query: 118 RIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 I++ E G + PH+LRH+ + G D R +Q+ LGH +I T YT N Sbjct: 226 LILKQYAEELGL-SDLTPHVLRHSFAVHMLNAGFDLRAVQELLGHTSISTTQIYTHLNHE 284 Query: 178 RFAGLWERNNLINEKLK 194 ++ Sbjct: 285 SSHTPHAHPAPRASEVN 301 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 6/193 (3%) Query: 3 KRRYLTGKEVQAMMQ-AVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 L EV A++ A RD L LAY G+R EL+ L ++ + R+ Sbjct: 122 LPYVLKPVEVAALLDRIPADTALALRDRALFELAYASGLRAEELVMLDVGSIEFDGERVR 181 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + + P +A+ R+ R A+ A+F+S+ G RLS R + Sbjct: 182 VEG-KGAKTRIVPAGEPALKAIARYLDRARPALATAESDGALFLSKSGRRLSTSDVRRRL 240 Query: 121 RDAGIEA---GTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAA 177 R +A T PH LRH+ L E GAD R IQ+ LGH +I T YT +A Sbjct: 241 RVWARQAAGVSTAGGVSPHALRHSFATHLLENGADLRSIQELLGHASISTTQVYTRVESA 300 Query: 178 RFAGLWERNNLIN 190 R + ++ Sbjct: 301 RLRSAYANSHPRA 313 >UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D807_9ACTN Length = 319 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 23/210 (10%) Query: 3 KRRYLTGKEVQAMMQ---------AVCYGATGA----------RDYCLILLAYRHGMRIS 43 LT ++ ++ A A A RD ++ + Y G+R+S Sbjct: 110 LPDVLTQDQIIHLLDDPFKPQLLPAPKLTARKALSLKPQACFYRDKAILEMLYGCGLRVS 169 Query: 44 ELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG--ADRTDA 101 EL L+ D+ +++ + + K + P E+ + + + TDA Sbjct: 170 ELCGLNQGDVLVSDELVRVFG-KGSKERLVPCLGTALESYQNYCTKWRALLACSPKTTDA 228 Query: 102 IFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLG 161 +F+S RG+R+SRQ + ++ G G HPH LRH+ + E G + R++Q+ LG Sbjct: 229 VFLSVRGTRISRQAVFSLVERYGSYVGI-KGLHPHTLRHSYATHMLEGGMNLRIVQELLG 287 Query: 162 HRNIRHTVRYTASNAARFAGLWERNNLINE 191 H +I T YT + + + + Sbjct: 288 HASISTTQLYTHIDLTHIRSEYMAAHPRAQ 317 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 241 bits (617), Expect = 8e-63, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 5/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 S + L+ EV+ +++A + G RD ++ Y G+R+SEL + +DL G + Sbjct: 110 SLPKILSQDEVERLIEAPDPHRPEGVRDRAILSFFYASGLRVSELATITADRVDLATGAL 169 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + K + L R + + R + +F++R G+ L+RQ + + Sbjct: 170 RVMG-KGAKERIAFLDERTRHLLSDYLTTVRPAFAREHPE--LFLARDGAPLTRQALWTL 226 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 I+ G AG + PH+LRH+ L E+G D R IQ LGH +IR T YT + A Sbjct: 227 IKKHGRAAGITSPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYTHVSLAHL 286 Query: 180 AGLWERNNLINE 191 + ++ + Sbjct: 287 ENTLKLHHPRGQ 298 >UniRef50_B0TX96 Phage integrase family protein n=19 Tax=Francisella RepID=B0TX96_FRAP2 Length = 293 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 4/193 (2%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRIN 61 + + E+ ++ RD L Y G+R+SEL + +D+++N+ I Sbjct: 105 KLPKAVNTDELAYLLDIKPSNNIETRDIACFDLLYSCGIRLSELSSIELKDININQKSIR 164 Query: 62 IRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIR 121 + K V + RW R + + + + +FIS+ G L+ + + I Sbjct: 165 VIG-KGNKERVVYFGSKTLINLNRWLNTRDTY--SPKCNFLFISQNGEHLTNRSIQKRIE 221 Query: 122 DAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAG 181 + HPHMLRH+ + + D ++D LGH +I T YT N + A Sbjct: 222 IFAQKYA-TKHIHPHMLRHSFATHVLDSSKDLLAVKDLLGHADISSTQIYTHLNFQQLAS 280 Query: 182 LWERNNLINEKLK 194 ++++ + +K Sbjct: 281 VFDKAHPRAKKKS 293 >UniRef50_C1F4E0 Putative tyrosine recombinase XerC n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4E0_ACIC5 Length = 310 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 12/201 (5%) Query: 2 SKRRYL----TGKEVQAMMQAVCYGATG--ARDYCLILLAYRHGMRISELLDLHYQDLDL 55 ++L T +++ ++ A ARD ++ L Y G+R +EL+ ++ +D+ Sbjct: 111 KLPKHLPRVPTIEDMNRLVDASSEEVAAWPARDRLILELLYGCGIRNAELVGINLEDIQW 170 Query: 56 NEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKG--ADRTDAIFISRR---GSR 110 I +R K P+ +A+ + ER + A+ ++ R R Sbjct: 171 TNEAILVRG-KGRKERYVPIGDAAAQALRAYLPERNQKLATAGKDSAALLLNARLRGQGR 229 Query: 111 LSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVR 170 L+ + RI++ + G HPH LRHA G L E GAD R IQ+ LGH + T R Sbjct: 230 LTTRSVGRIVKQMALAQGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLSTTQR 289 Query: 171 YTASNAARFAGLWERNNLINE 191 YT + +++R + + Sbjct: 290 YTQLTVGQVEAVYDRTHPRAK 310 >UniRef50_Q9HIM5 Site-specific integrase/recombinase XerD related protein n=4 Tax=Thermoplasmatales RepID=Q9HIM5_THEAC Length = 283 Score = 240 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 5/186 (2%) Query: 4 RRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIR 63 YL+ E + +++A R Y ++ + G+R+ EL +L D+DL E IN+R Sbjct: 102 PVYLSEDEAKRLIEAASSDT---RMYAIVSVLAYTGVRVGELCNLKISDVDLQESIINVR 158 Query: 64 RLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDA 123 K + + + +A+ + R D +F+S R R R+IRD Sbjct: 159 SGKGDKDRIVIMAEECVKALGSYLDLR--LSMDTDNDYLFVSNRRVRFDTSTIERMIRDL 216 Query: 124 GIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLW 183 G +AG + PH+LRH + G D R IQ LGH ++ T YT N + ++ Sbjct: 217 GKKAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLNDSALREMY 276 Query: 184 ERNNLI 189 ++ Sbjct: 277 TQHRPR 282 >UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE8_9DELT Length = 327 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 17/204 (8%) Query: 4 RRYLTGKEVQAMMQAVC--------------YGATGARDYCLILLAYRHGMRISELLDLH 49 R L + A++ A ARD+ L L Y G+RISE L L Sbjct: 127 PRVLNVDQAFAVLDTPDALAGTGSPRIPPATGDALAARDHALAELLYGSGLRISEALGLD 186 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGS 109 DL L+E + + K + PL A+ W ++R + A+F+ RG Sbjct: 187 VTDLRLDESVVRVFG-KGARERMSPLSDTSVTALRAWLEQRGTL-APEGEKALFVGARGG 244 Query: 110 RLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTV 169 RL R++A R I AG PH LRH+ L + GAD R +Q+ LGH+ + T Sbjct: 245 RLDRREAMRRIERLCRNAGVE-PVSPHALRHSFATHLLDAGADLRSVQELLGHQRLTTTQ 303 Query: 170 RYTASNAARFAGLWERNNLINEKL 193 RYT + R L++ + +K Sbjct: 304 RYTRVSLERLMHLYDEAHPRAQKK 327 >UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteriaceae RepID=XERC_BIFLI Length = 355 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 10/182 (5%) Query: 17 QAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLR 76 A R+ ++ L Y G+R++EL+ + D+D + I + K V P Sbjct: 176 DNARVTAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTG-KGNKQRVVPFG 234 Query: 77 FDEREAVERWTQERANWKGADRTDA--------IFISRRGSRLSRQQAYRIIRDAGIEAG 128 + A+E W ++ TDA +F+ RG R+ ++ A I+ A EAG Sbjct: 235 LPAQRALETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHRAAREAG 294 Query: 129 TVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNL 188 PH LRH+ + + GAD R +Q+ LGH +++ T RYT + + + + Sbjct: 295 VP-DISPHALRHSAATHILDGGADLREVQEMLGHSSLKTTQRYTHVSIEQLKNRYGQAFP 353 Query: 189 IN 190 Sbjct: 354 RA 355 >UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S5H6_PROA2 Length = 335 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 22/210 (10%) Query: 2 SKRRYLTGKEVQAMMQ----------------AVCYGATGARDYCLILLAYRHGMRISEL 45 +L+ +E + + A G T ARD L+ + Y G+RISE+ Sbjct: 127 PVPGFLSERETEKLFDELLSLPAPGEALGAVRAGDGGFTYARDRALLEVLYGCGLRISEV 186 Query: 46 LDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTD----- 100 + L Y++++L + + + K G + PL R A+ + + R N+ + Sbjct: 187 IGLQYENVNLQDSLLRVSG-KGGKQRIVPLGGPARTALRNYFEVRRNFFRMKNEESPDAS 245 Query: 101 AIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYL 160 +F++++G R+ R+ R + +PH+LRH+ + GAD + + + L Sbjct: 246 YVFVTKKGRRIYPVLVQRVTRKYLSAVTEIKYKNPHVLRHSFATHMLNSGADLKSVSEML 305 Query: 161 GHRNIRHTVRYTASNAARFAGLWERNNLIN 190 GH N+ T YT R ++ + + Sbjct: 306 GHTNLTTTEIYTHVTFGRIKEVYLKAHPKA 335 >UniRef50_Q72AD1 Site-specific recombinase, phage integrase family n=5 Tax=Bacteria RepID=Q72AD1_DESVH Length = 474 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 2/164 (1%) Query: 27 RDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERW 86 RD L L Y G+RISE L L D D + G + + K + PL +A+ W Sbjct: 261 RDLALAELLYGSGLRISEALGLDVLDADPSAGVVRVLG-KGSKERMSPLSDTSVDALREW 319 Query: 87 TQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYEL 146 R + ++ A+F+ RG RL R+QA RII AG PH LRH+ L Sbjct: 320 LHFRHHL-ASEGERALFVGARGDRLDRRQATRIIDALCRRAGLPQSVSPHGLRHSFATHL 378 Query: 147 AERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 E GAD R +Q+ LGH + T RYT A ++++ + Sbjct: 379 LEAGADLRSVQELLGHARLATTQRYTHLTLAHLIEVYDKAHPRA 422 >UniRef50_C7NGY7 Site-specific recombinase XerD n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NGY7_KYTSD Length = 336 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 2/173 (1%) Query: 19 VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFD 78 AT RD ++ L Y G+R+ EL+ L + L + + + K V P Sbjct: 165 PVSLATDLRDRAVLELLYATGIRVGELVSLDTGAVSLQDHTVRVWG-KGSKERVVPFGVP 223 Query: 79 EREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHM 137 A+E W + R GA +A+F+ RG R+ ++ R++ A PH Sbjct: 224 ALRALEEWVHQGRPELLGARSGEALFLGVRGGRIDPREVRRVVHRAAQRVEGAADIGPHG 283 Query: 138 LRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 LRH+ + + GAD R +Q+ LGH ++ T YT + R ++R++ Sbjct: 284 LRHSAATHMVDAGADIRSVQELLGHASLATTQVYTHVSVERLREAFDRSHPRA 336 >UniRef50_C8N6J9 Tyrosine recombinase XerC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6J9_9GAMM Length = 301 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 2/197 (1%) Query: 2 SKRRYLTGKEVQAMMQAV-CYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 LT +++ +++A RD+ ++ L Y G+R++EL L +DL + Sbjct: 104 PLPDALTPEQITTLLEAPATDNPNLIRDHTILELFYSAGLRLAELASLDNRDLGPDSEH- 162 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 +I R K G + + REA+ RW R A+F+++ G RL+ + + Sbjct: 163 HIIRGKGGVERLIFIGSKAREALARWQTVRGQLLKKADEPALFLNKNGGRLTERGIALRL 222 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + E HPHMLRH + + D R +Q+ LGH+N+ T YT + A Sbjct: 223 KAYAAERLPGVNVHPHMLRHTFASHILQSSGDLRSVQELLGHKNLATTQIYTHLDYQHLA 282 Query: 181 GLWERNNLINEKLKREE 197 ++ + +K + E Sbjct: 283 RTYDEKHPRAKKKRDGE 299 >UniRef50_Q311L4 Site-specific recombinase XerD-like n=2 Tax=Desulfovibrio RepID=Q311L4_DESDG Length = 332 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 86/206 (41%), Gaps = 16/206 (7%) Query: 4 RRYLTGKEVQAMMQ--------------AVCYGATGARDYCLILLAYRHGMRISELLDLH 49 R L + A++ RD L L Y G+RISE L L Sbjct: 124 PRALNVDQAYAVLDTRTQAASRAQVHVRQAHKREQLTRDLALAELLYGSGLRISEALALD 183 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANW-KGADRTDAIFISRRG 108 D + G I + K + PL R+A++ W R A+F+ RG Sbjct: 184 LCHTDPSSGLIKVTG-KGSKERIVPLSDTSRQALQLWLDVRETLDVSGGAEQAVFLGARG 242 Query: 109 SRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHT 168 RL+R+QA RII D AG PH LRH+ L E GAD R +Q+ LGH + T Sbjct: 243 GRLNRRQALRIIEDLCRAAGLPQAVSPHALRHSFATHLLEAGADMRSVQELLGHERLTTT 302 Query: 169 VRYTASNAARFAGLWERNNLINEKLK 194 RYT + +++R + ++ K Sbjct: 303 QRYTHLTLRKIVEVYDRAHPGSKAGK 328 >UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN0_9FIRM Length = 300 Score = 238 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 1/194 (0%) Query: 3 KRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINI 62 YL+ EV+ + + + ++++ Y G+R+SEL DL D+ L E + + Sbjct: 108 LPVYLSVDEVKKVFSSFQDNEIDQYNKTILVVLYSCGLRVSELCDLKLNDVHLTEQILKV 167 Query: 63 RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRD 122 + K + P+ ++ + F++R G +RQ + +I+ Sbjct: 168 KG-KGDKERIIPISSYCVSQMKYYLDSIRFVWDVKNVSYFFVNRLGHICTRQYVHLMIKQ 226 Query: 123 AGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGL 182 E + H RH+ L + AD R++Q+ LGH NI T YT R + + Sbjct: 227 KVNELNLNPKISAHSFRHSFATHLLDGDADLRIVQELLGHSNISTTQIYTHIQDKRLSSV 286 Query: 183 WERNNLINEKLKRE 196 ++R EK K E Sbjct: 287 YDRCFQKIEKSKEE 300 >UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB85_BRAFD Length = 332 Score = 238 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 86/219 (39%), Gaps = 32/219 (14%) Query: 3 KRRYLTGKEVQAMMQA-------------------------VCYGATGARDYCLILLAYR 37 LTG + ++ A RD ++ L Y Sbjct: 115 LPTVLTGDQAGELLDGLDGSARDDSAAPPREIAAAPRAEQDPRDRAVLLRDAAVLELLYS 174 Query: 38 HGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWK-- 94 G+R+SEL+ L +D G + +R K + P+ EA++RW E R Sbjct: 175 SGLRVSELVALDRSRIDRQHGTVRVRG-KGDRERIVPVGLPALEALQRWESEGRPVLLAA 233 Query: 95 ---GADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGA 151 G DA+F+ RG RL + ++ EAG PH LRH+ L E GA Sbjct: 234 ATPGTPPGDALFLGVRGGRLGDRAVRTLVDRHVAEAGISRHVTPHTLRHSAATHLVEGGA 293 Query: 152 DTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 D R +QD+LGH ++ T YT +A R ++ + Sbjct: 294 DLRSVQDFLGHSSLATTQIYTHVSAERLRRTVDQAHPRA 332 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 8/196 (4%) Query: 3 KRRYLTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + ++ +E+ AM++ G G RD LI L Y G RI+E+++L DL L Sbjct: 120 LPKAISLEEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPDDLYLAGEFP 179 Query: 61 NI-RRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRT-----DAIFISRRGSRLSRQ 114 ++ K + PL +A+E + +F+++RG LSRQ Sbjct: 180 HVKLFGKGRKERLVPLGSFAVQALEDYLLLGRPLLLGKAKTRVAGHPLFLNKRGLSLSRQ 239 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 A+ II + AG V++ PH LRH+ L E GA R +Q+ LGH ++ T YT Sbjct: 240 SAWEIISQTAVAAGCVSEVSPHSLRHSFATHLLEGGASIRDVQELLGHASVTTTQIYTKV 299 Query: 175 NAARFAGLWERNNLIN 190 + + + Sbjct: 300 SMNTLREVHALTHPRA 315 >UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZA8_ACIFD Length = 299 Score = 238 bits (608), Expect = 9e-62, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 4/196 (2%) Query: 1 MSKRRYLTGKEVQAMMQAVCY-GATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 ++ R L EV+ ++++V GARD ++ + Y G+R+SEL + Sbjct: 107 VALPRALARDEVERLIESVGTADVAGARDRAILEVLYGSGVRVSELCGFTLDTI-AQGRW 165 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 + + K G + P+ R+A+E+W R + A + +F++ RG+ ++RQ + + Sbjct: 166 VPVVG-KRGRERLVPISAPARDALEQWV-VRWRPQLAPKHRMLFVNLRGAPITRQGVWLV 223 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARF 179 ++ G + PH+LRH+ + E GAD R++Q+ LGH ++ T YT + Sbjct: 224 LKQRASRVGLGDRVSPHVLRHSLAVHMVEAGADLRVVQEILGHASLATTELYTKVSEGHV 283 Query: 180 AGLWERNNLINEKLKR 195 +++R + R Sbjct: 284 DAVYQRAHPRARAGSR 299 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 4/192 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +E++ ++ + GAR+ +I + Y G+R++EL++L +L L+ G + Sbjct: 109 KIPDVLSLQEIEDLLAVIDLSTPEGARNRAMIEVLYSSGLRVTELIELKISNLYLDIGFL 168 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ--ERANWKGADRTDAIFISRRGSRLSRQQAYR 118 I K P+ + + + + + D +F++RRG+++SR + Sbjct: 169 RIIG-KANKERFVPIGREAARYLISYIENIRSNVPVKPNNEDFVFLNRRGTKISRVMVFM 227 Query: 119 IIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAAR 178 II++ + A PH RH+ L GA+ + +Q+ LGH NI T Y + Sbjct: 228 IIKEVALLADIKKNISPHTFRHSFATHLILGGANIKAVQEMLGHENITTTEIYKRLDQDI 287 Query: 179 FAGLWERNNLIN 190 + + Sbjct: 288 LRQTLLEFHPRS 299 >UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABE3_GEMAT Length = 324 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 15/203 (7%) Query: 2 SKRRYLTGKEVQAMMQAVCYGATGA-----RDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + YL + + +MQ A R+ ++ L Y G+R+SEL + DLDL Sbjct: 123 TLPAYLDRTQAETLMQHAATRAQSLEFTDVRNLAMLELFYSSGLRLSELRGVDLADLDLV 182 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAI---------FISRR 107 ++ +R K + PL + A+ + +R A+ F+S R Sbjct: 183 SQQVKVRG-KGRKERIVPLGDHAQRALRNYLVKRDALIAQASGGAVGRRVARGAVFLSER 241 Query: 108 GSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRH 167 G+R+S + + H LRH L + GAD R +Q+ LGH +I Sbjct: 242 GARISARAVQHAMVTLMSAVSEGADLTTHSLRHTFATHLVDAGADLRAVQELLGHASIST 301 Query: 168 TVRYTASNAARFAGLWERNNLIN 190 T YT ++ R ++ + + Sbjct: 302 TQIYTHTSVDRLKKVYRQAHPRA 324 >UniRef50_C5BWU3 Integrase family protein n=11 Tax=Actinomycetales RepID=C5BWU3_BEUC1 Length = 380 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 16/201 (7%) Query: 4 RRYLTGKEVQAMMQAV--------------CYGATGARDYCLILLAYRHGMRISELLDLH 49 LT + ++ V A RD ++ L Y +R+SEL L Sbjct: 182 PVVLTEADAATVLDGVRADDGGVGADDDEGERSALALRDSAMLELLYGAALRVSELAGLD 241 Query: 50 YQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGS 109 D+DL E + + K V P A+E W R G A+F+ RG Sbjct: 242 TGDVDLRERLVRVLG-KGAKERVVPFGLPAARAIEAWISVRPELAGPRSGRALFLGARGG 300 Query: 110 RLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTV 169 R+ + ++ A AG PH LRH+ L G+D R +Q+ LGH ++ T Sbjct: 301 RIDPRVVRDVVHRATARAGV-RDLAPHGLRHSAATHLLAGGSDLRSVQEILGHASLATTQ 359 Query: 170 RYTASNAARFAGLWERNNLIN 190 RYT R + + + Sbjct: 360 RYTHVTPERLRAAFRQAHPRA 380 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 4/173 (2%) Query: 2 SKRRYLTGKEVQAMMQAVC-YGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 L+ +EV ++ RD ++ L Y G+R+SEL++L+ +++ G I Sbjct: 106 KAPSILSVEEVTRLLNQPGGRTPKEIRDKAMLELLYATGIRVSELMNLNLHHINMTIGFI 165 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQ-ERANWKGADRTDAIFISRRGSRLSRQQAYRI 119 G P ++A++ + + R +D +F++ G ++SRQ ++I Sbjct: 166 TCSDS--GRERTIPFGRVAKKALDDYLKNSRPELTKKKESDWLFVNCSGGQMSRQGFWKI 223 Query: 120 IRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYT 172 I+ G +AG T PH LRH+ L GAD + +Q LGH ++ T Y Sbjct: 224 IKYYGEKAGIQTDITPHTLRHSFAAHLISSGADMKAVQQILGHSDMATTQMYA 276 >UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae RepID=XERC_CHLP8 Length = 336 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 23/211 (10%) Query: 2 SKRRYLTGKEVQAMM-----------------QAVCYGATGARDYCLILLAYRHGMRISE 44 R+++ +E + + +A RD ++ + Y G+R+SE Sbjct: 127 KVPRFVSEEEARQLFRRFESQEDNAALQGDGKKAEVRQFETFRDRAVLEVLYGCGLRLSE 186 Query: 45 LLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERA-----NWKGADRT 99 L+ L D+DL G + + K + PL EA+ ++ + R + + Sbjct: 187 LIALERADVDLVHGFLKVTG-KGRKQRIVPLGEPAVEALRKYFEVRRNFFRIPLERTGES 245 Query: 100 DAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDY 159 +F++ RG +L R+ + + +PH+LRH+ + GAD + + + Sbjct: 246 SRVFVTSRGRQLYPMLVQRMTKRYLTPVSESEKKNPHILRHSFATHMLNGGADLKSVSEM 305 Query: 160 LGHRNIRHTVRYTASNAARFAGLWERNNLIN 190 LGH ++ T YT +R ++++ + Sbjct: 306 LGHSSLTTTELYTHVTFSRLKEIYDKAHPGA 336 >UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMN9_ACIBL Length = 300 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 6/195 (3%) Query: 2 SKRRYLTGKEVQAMMQA--VCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGR 59 R T +E+ +M A + RD + L Y G+R SEL ++ D+ + Sbjct: 107 KLPRVPTMEELNTVMDAEMPEAASFPERDALIFELLYGCGIRNSELTGINLDDIRWSNEA 166 Query: 60 INIRRLKNGFSTVHPLRFDEREAVERWTQERANWK--GADRTDAIFISRRG-SRLSRQQA 116 I IR K P A + + ++R + T+A+ I+ R RL+ + Sbjct: 167 ILIRG-KGKKERFVPFGDAAAVAAKVYLKKRQDILAERHKSTNALLINLRDVQRLTSRSV 225 Query: 117 YRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNA 176 RI++ + G HPH LRHA G L E GAD R IQ+ LGH + T RYT + Sbjct: 226 GRIVKKIAVARGLPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLATTQRYTQLST 285 Query: 177 ARFAGLWERNNLINE 191 ++++ + + Sbjct: 286 RHVLEVYDKTHPRAK 300 >UniRef50_Q72RY9 Tyrosine recombinase xerC n=6 Tax=Leptospira RepID=XERC_LEPIC Length = 318 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 81/192 (42%), Gaps = 6/192 (3%) Query: 4 RRYLTGKEVQAMMQAVCYGATG---ARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI 60 + E + +++ A+ RD +I + Y G+R+ EL++ L + + Sbjct: 130 PKNFRINETEEILEFESENASEVSEIRDRAMIEVLYSSGLRVFELVNAKLNSLSKDLTVL 189 Query: 61 NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII 120 + K + +++++ + R + IF+++RG +L+ + I+ Sbjct: 190 KVLG-KGRKERFVYFGKEAVSSLQKYLEYRN--VSFPDAEEIFLNQRGKKLTTRGVRYIL 246 Query: 121 RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA 180 + + G PH RH +L + GA+ R +Q+ LGH ++ T Y + + + Sbjct: 247 NERRKKMGWEKTITPHKFRHTFATDLLDAGAEIRAVQELLGHSSLSTTQIYLSVSKEKIK 306 Query: 181 GLWERNNLINEK 192 ++ + + K Sbjct: 307 EVYRKAHPHARK 318 >UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria (class) RepID=A0QJ30_MYCA1 Length = 301 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 7/195 (3%) Query: 2 SKRRYLTGKEV-----QAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLN 56 + L + A A RD ++ + Y G+R+SEL L D+D Sbjct: 108 TLPAVLRQDQALGAMAAAKNGAAQGDPIALRDRLIVEMLYATGIRVSELCGLDIDDVDTG 167 Query: 57 EGRINIRRLKNGFSTVHPLRFDEREAVERWTQE-RANWKGADRTDAIFISRRGSRLSRQQ 115 + + K P EA+ W + R A+ A+ + RG RL +Q Sbjct: 168 RRLVRVLG-KGNKQRSVPFGAPAGEALHAWLADGRPALANAESGPALLLGARGRRLDVRQ 226 Query: 116 AYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASN 175 A ++ PH LRH+ L E GAD R++Q+ LGH ++ T YT Sbjct: 227 ARTVVHQTIAAVSGAPDMGPHGLRHSAATHLLEGGADLRVVQELLGHSSLATTQLYTHVA 286 Query: 176 AARFAGLWERNNLIN 190 +R + ++ + Sbjct: 287 VSRLRAVHDQAHPRA 301 >UniRef50_A5FIL1 Phage integrase family protein n=4 Tax=Flavobacteriaceae RepID=A5FIL1_FLAJ1 Length = 297 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 7/197 (3%) Query: 1 MSKRRY----LTGKEVQAMMQAVCY--GATGARDYCLILLAYRHGMRISELLDLHYQDLD 54 + + + KEV +M V G RD ++ L Y GMR +EL+ L +++D Sbjct: 102 LKTPKIVQIPFSEKEVSDLMFGVESPIGFEEVRDKLIVDLFYTTGMRRAELIGLMLKNVD 161 Query: 55 LNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQ 114 L+ G + + K + PL + + + +ER ++ FIS++G +LS Sbjct: 162 LSSGVVKVLG-KRSKERIVPLLPIVADQINLYIKEREQLDQIVDSEYFFISKKGLKLSES 220 Query: 115 QAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTAS 174 YR+I + PH+LRH L GAD +++ LGH ++ T YT + Sbjct: 221 FVYRLINCYFSRVSEKVKKSPHVLRHTFATHLLNNGADLNSVKELLGHSSLASTQVYTHN 280 Query: 175 NAARFAGLWERNNLINE 191 + A ++ + N+ Sbjct: 281 SLAELKKVYSEAHPRNK 297 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.207 0.785 Lambda K H 0.267 0.0634 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,818,476,743 Number of Sequences: 3077464 Number of extensions: 114482039 Number of successful extensions: 360846 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 7349 Number of HSP's successfully gapped in prelim test: 4344 Number of HSP's that attempted gapping in prelim test: 334534 Number of HSP's gapped (non-prelim): 13110 length of query: 198 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 76 effective length of database: 664,945,748 effective search space: 50535876848 effective search space used: 50535876848 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.4 bits) S2: 91 (39.0 bits)