3 c1rktA_ Probab=99.93   E-value=4e-23  Score=170.40  Aligned_columns=194  Identities=19%

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             77057779999999999999999960935275999999948999998840799899999999999999999998400689
Q batch____         2 MDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERALARFREPIEGI   81 (196)
Q Consensus         2 ~~~~~~~~~~tr~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~~K~~L~~~~~~~~~~~~~~~~~~~~~~~   81 (196)
                      .+..+.++++||++|+++|.++|.++||+++||++||++||||+|+||+||+||++|+.+++.+..+.+...+.......
T Consensus         2 Pr~~~~~~~~~r~~Il~aA~~lf~~~G~~~~si~~Ia~~agvs~~tiY~~F~sKe~L~~a~~~~~~~~~~~~~~~~~~~~   81 (204)
T c1rktA_           2 PKVTKEHKDKRQAEILEAAKTVFKRKGFELTTXKDVVEESGFSRGGVYLYFSSTEEXFRRIIETGLDEGLRKLDKSAEHQ   81 (204)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             77798999999999999999999961920088999999958999997300799799999999999999999999732269


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCHHHHHHHH----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             998999999999999984143059999998----4024017999999999999999999999997699999999899999
Q batch____        82 HFVDYMVESIVSLTHEAFGQRALVVEIMAE----GMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSR  157 (196)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  157 (196)
                      ++.+.....+.................+..    ...++............+...+...+..++..|.++++.++..++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~  161 (204)
T c1rktA_          82 SVWASISSYLDELTEGLRDVADTLAPVQFEYLVTAWRNEERRQYLEKRYDLFVERFSRLLQKGIDQGEFQPVQPLATIAK  161 (204)
T ss_dssp             CHHHHHHHHHHHHHHHTTTGGGSSHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf             90899999999999999826112589999999821354078999999999999999999999998499999999899999


Q ss_pred             HHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999999984258999--0899999999999956203
Q batch____       158 LLLDLTYGVLADIEAEDLA--REASFAQGLRAMIGGILTA  195 (196)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~gllta  195 (196)
                      ++++.+.|+...+...+..  ....+.+.++.++.+++.+
T Consensus       162 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  201 (204)
T c1rktA_         162 FFLNXNDGIIQNALYFDEEKADVSGLAESAKLYLKTVLQA  201 (204)
T ss_dssp             HHHHHHHHHHHHHHHSCHHHHCHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999953988899899999999999999611