 |
| Job Description | P24255 | | Confidence | 55.83% | Date | Thu Jan 5 11:41:39 GMT 2012 |
| Rank | 443 | Aligned Residues | 48 |
| % Identity | 19% | Template | c1wsuA_ |
| PDB info |
PDB header:translation/rna | Chain: A: PDB Molecule:selenocysteine-specific elongation factor; |
PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna
|
| Resolution | 2.30 Å |
|
|   |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | D | T | D | R | A | I | A | T | S | I | V | D | A | V | D | E | T | G | Y | L | T | V | P | L | E | D | I | L | E | S | I | G | D | E | E | I | D | I | D | E | V | E | A | V | L | K | R | I | Q | R |
| Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
| Template Sequence |   |
S | E | T | Q | K | K | L | L | K | D | L | E | D | K | Y | R | V | S | R | W | Q | P | P | S | F | K | E | V | A | G | S | F | N | . |
. |
. |
L | D | P | S | E | L | E | E | L | L | H | Y | L | V | R |
| Template Known Secondary structure |   |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| B |  |  |  |  |  |  |  |  | T | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
512 | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | |
|
|
. | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|