Phyre 2 Results for P25746

Email | l.a.kelley@imperial.ac.uk
Description | P25746
Date | Thu Jan 5 11:42:34 GMT 2012
Unique Job ID | fc1afae978af8daf

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1sdia_ |
|  | 100.0 | 100 | Fold:YcfC-like Superfamily:YcfC-like Family:YcfC-like
2 | c2xr1A_ |
|  | 39.1 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor 100 kd PDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei
3 | c2gejA_ |
|  | 33.1 | 12 | PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man
4 | c2ycbA_ |
|  | 30.0 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor; PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus
5 | c2rdcA_ |
|  | 27.0 | 22 | PDB header:lipid binding protein Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative lipid binding protein (gsu0061) from2 geobacter sulfurreducens pca at 1.80 a resolution
6 | c3af5A_ |
|  | 22.9 | 34 | PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ph1404; PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii
7 | d2fgea1 |
|  | 21.5 | 17 | Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:MPP-like
8 | c2k1vB_ |
|  | 15.7 | 46 | PDB header:hormone Chain: B: PDB Molecule:relaxin-3; PDBTitle: r3/i5 relaxin chimera
9 | c2rpaA_ |
|  | 15.1 | 28 | PDB header:hydrolase Chain: A: PDB Molecule:katanin p60 atpase-containing subunit a1; PDBTitle: the solution structure of n-terminal domain of microtubule severing2 enzyme
10 | c3fxdD_ |
|  | 14.0 | 36 | PDB header:unknown function Chain: D: PDB Molecule:protein icmr; PDBTitle: crystal structure of interacting domains of icmr and icmq
11 | c3cx3A_ |
|  | 11.7 | 7 | PDB header:metal binding protein Chain: A: PDB Molecule:lipoprotein; PDBTitle: crystal structure analysis of the streptococcus pneumoniae2 adcaii protein
12 | c3mzkC_ |
|  | 11.7 | 18 | PDB header:protein transport Chain: C: PDB Molecule:protein transport protein sec16; PDBTitle: sec13/sec16 complex, s.cerevisiae
13 | c2rmsB_ |
|  | 11.6 | 56 | PDB header:transcription Chain: B: PDB Molecule:msin3a-binding protein; PDBTitle: solution structure of the msin3a pah1-sap25 sid complex
14 | c2xdjF_ |
|  | 10.4 | 22 | PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf
15 | c2h8bB_ |
|  | 9.8 | 40 | PDB header:hormone/growth factor Chain: B: PDB Molecule:insulin-like 3; PDBTitle: solution structure of insl3
16 | c2ogwB_ |
|  | 9.0 | 13 | PDB header:transport protein Chain: B: PDB Molecule:high-affinity zinc uptake system protein znua PDBTitle: structure of abc type zinc transporter from e. coli
17 | c2r5uD_ |
|  | 8.9 | 20 | PDB header:hydrolase Chain: D: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the n-terminal domain of dnab helicase from2 mycobacterium tuberculosis
18 | c2jufA_ |
|  | 8.5 | 27 | PDB header:gene regulation Chain: A: PDB Molecule:p53-associated parkin-like cytoplasmic protein; PDBTitle: nmr solution structure of parc cph domain. nesg target2 hr3443b/sgc-toronto
19 | d1qi9a_ |
|  | 8.3 | 29 | Fold:Acid phosphatase/Vanadium-dependent haloperoxidase Superfamily:Acid phosphatase/Vanadium-dependent haloperoxidase Family:Haloperoxidase (bromoperoxidase)
20 | c2fhdA_ |
|  | 8.3 | 20 | PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9/crb2; PDBTitle: crystal structure of crb2 tandem tudor domains
21 | c3h25A_ |
| not modelled | 8.2 | 32 | PDB header:replication/dna Chain: A: PDB Molecule:replication protein b; PDBTitle: crystal structure of the catalytic domain of primase repb' in complex2 with initiator dna
22 | c3hgkE_ |
| not modelled | 8.2 | 20 | PDB header:transferase Chain: E: PDB Molecule:effector protein hopab2; PDBTitle: crystal structure of effect protein avrptob complexed with2 kinase pto
23 | d2jnga1 |
| not modelled | 7.9 | 27 | Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:CPH domain
24 | d1qhba_ |
| not modelled | 7.7 | 18 | Fold:Acid phosphatase/Vanadium-dependent haloperoxidase Superfamily:Acid phosphatase/Vanadium-dependent haloperoxidase Family:Haloperoxidase (bromoperoxidase)
25 | d1vkea_ |
| not modelled | 7.6 | 13 | Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like
26 | d1up8a_ |
| not modelled | 7.5 | 14 | Fold:Acid phosphatase/Vanadium-dependent haloperoxidase Superfamily:Acid phosphatase/Vanadium-dependent haloperoxidase Family:Haloperoxidase (bromoperoxidase)
27 | c2o1eB_ |
| not modelled | 7.5 | 11 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:ycdh; PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583
28 | d1u7ka_ |
| not modelled | 7.2 | 33 | Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain
29 | d2jeka1 |
| not modelled | 7.1 | 20 | Fold:Rv1873-like Superfamily:Rv1873-like Family:Rv1873-like
30 | c1yv0T_ |
| not modelled | 7.0 | 27 | PDB header:contractile protein Chain: T: PDB Molecule:troponin t, fast skeletal muscle isoforms; PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 free state
31 | c1xouA_ |
| not modelled | 7.0 | 24 | PDB header:structural protein/chaperone Chain: A: PDB Molecule:espa; PDBTitle: crystal structure of the cesa-espa complex
32 | d1xoua_ |
| not modelled | 7.0 | 24 | Fold:EspA/CesA-like Superfamily:EspA/CesA-like Family:EspA-like
33 | d2v7qi1 |
| not modelled | 6.7 | 60 | Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Epsilon subunit of mitochondrial F1F0-ATP synthase Family:Epsilon subunit of mitochondrial F1F0-ATP synthase
34 | c2w9zA_ |
| not modelled | 6.5 | 17 | PDB header:transferase Chain: A: PDB Molecule:g1/s-specific cyclin-d1; PDBTitle: crystal structure of cdk4 in complex with a d-type cyclin
35 | c3nrhA_ |
| not modelled | 6.4 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bf1032; PDBTitle: crystal structure of protein bf1032 from bacteroides fragilis,2 northeast structural genomics consortium target bfr309
36 | d1jwea_ |
| not modelled | 6.2 | 18 | Fold:N-terminal domain of DnaB helicase Superfamily:N-terminal domain of DnaB helicase Family:N-terminal domain of DnaB helicase
37 | c1cosA_ |
| not modelled | 6.2 | 29 | PDB header:alpha-helical bundle Chain: A: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle
38 | c1cosB_ |
| not modelled | 6.2 | 29 | PDB header:alpha-helical bundle Chain: B: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle
39 | c1cosC_ |
| not modelled | 6.2 | 29 | PDB header:alpha-helical bundle Chain: C: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle
40 | c3imoC_ |
| not modelled | 6.1 | 21 | PDB header:unknown function Chain: C: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of vibrio cholerae.2 integron cassette protein vch_cass14
41 | d1hula_ |
| not modelled | 5.7 | 19 | Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Short-chain cytokines
42 | c2f59B_ |
| not modelled | 5.5 | 20 | PDB header:transferase Chain: B: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase 1; PDBTitle: lumazine synthase ribh1 from brucella abortus (gene bruab1_0785,2 swiss-prot entry q57dy1) complexed with inhibitor 5-nitro-6-(d-3 ribitylamino)-2,4(1h,3h) pyrimidinedione
43 | d1b8za_ |
| not modelled | 5.5 | 14 | Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein
44 | d2bs2b2 |
| not modelled | 5.4 | 24 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins
45 | c3dlaD_ |
| not modelled | 5.3 | 19 | PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
46 | c3c4vB_ |
| not modelled | 5.2 | 14 | PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p.
47 | c3lk2B_ |
| not modelled | 5.0 | 18 | PDB header:protein binding Chain: B: PDB Molecule:f-actin-capping protein subunit beta isoforms 1 and 2; PDBTitle: crystal structure of capz bound to the uncapping motif from carmil