07/01/2012 23:00:29 : INFO  : Run start: Sat Jan  7 23:00:28 GMT 2012
07/01/2012 23:00:35 : INFO  : Initialised job
07/01/2012 23:00:37 : INFO  : Renaming log file 'phyre2_20120107_230028.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/fc1afae978af8daf/phyre_20120107_230028.log'
07/01/2012 23:00:39 : INFO  : Initialised job:
Sequence
>batch____
MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEA
NLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQL
EHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVL
WHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL

07/01/2012 23:00:40 : INFO  : Checked sequence
07/01/2012 23:00:43 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 23:00:45 : INFO  : PSI-BLAST 3 iterations
07/01/2012 23:02:20 : INFO  : PSI-BLAST 5 iterations
07/01/2012 23:03:29 : INFO  : Finished PSI-BLAST
07/01/2012 23:03:32 : INFO  : Running Buildali to generate a3m file
07/01/2012 23:10:29 : INFO  : Converting to HMM
07/01/2012 23:10:32 : INFO  : Calibrating HMM
07/01/2012 23:10:46 : INFO  : Searching HMM database
07/01/2012 23:15:12 : INFO  : Finished buildali
07/01/2012 23:15:14 : INFO  : Predicting secondary structure
07/01/2012 23:15:24 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 23:15:26 : INFO  : Predicting Disordered regions
07/01/2012 23:15:31 : INFO  : Predicted Disorder (Disopred)
07/01/2012 23:15:33 : INFO  : Running memsat_svm check
07/01/2012 23:21:48 : INFO  : Globular protein
07/01/2012 23:21:49 : INFO  : Predicted Transmembrane (memsat_svm) ID 'fc1afae978af8daf'
07/01/2012 23:21:51 : INFO  : Initialising fold library search
07/01/2012 23:21:55 : INFO  : Initialised search input
07/01/2012 23:21:58 : INFO  : Building Ensemble models
07/01/2012 23:22:02 : INFO  : Building hh.d1sdia_.model.1.pdb
07/01/2012 23:22:22 : INFO  : Building d1sdia_.1.pdb
07/01/2012 23:22:41 : INFO  : Building c2xr1A_.2.pdb
07/01/2012 23:23:00 : INFO  : Building c2gejA_.3.pdb
07/01/2012 23:23:19 : INFO  : Building c2ycbA_.4.pdb
07/01/2012 23:23:40 : INFO  : Building c2rdcA_.5.pdb
07/01/2012 23:23:59 : INFO  : Building c3af5A_.6.pdb
07/01/2012 23:24:18 : INFO  : Building d2fgea1.7.pdb
07/01/2012 23:24:39 : INFO  : Building c2k1vB_.8.pdb
07/01/2012 23:24:58 : INFO  : Building c2rpaA_.9.pdb
07/01/2012 23:25:18 : INFO  : Building c3fxdD_.10.pdb
07/01/2012 23:25:37 : INFO  : Building c3cx3A_.11.pdb
07/01/2012 23:25:55 : INFO  : Building c3mzkC_.12.pdb
07/01/2012 23:26:13 : INFO  : Building c2rmsB_.13.pdb
07/01/2012 23:26:31 : INFO  : Building c2xdjF_.14.pdb
07/01/2012 23:26:49 : INFO  : Building c2h8bB_.15.pdb
07/01/2012 23:27:08 : INFO  : Building c2ogwB_.16.pdb
07/01/2012 23:27:28 : INFO  : Building c2r5uD_.17.pdb
07/01/2012 23:27:46 : INFO  : Building c2jufA_.18.pdb
07/01/2012 23:28:04 : INFO  : Building d1qi9a_.19.pdb
07/01/2012 23:28:23 : INFO  : Building c2fhdA_.20.pdb
07/01/2012 23:29:03 : INFO  : Finished HH model building
07/01/2012 23:29:05 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 23:30:04 : INFO  : html domain output complete ID 'fc1afae978af8daf'
07/01/2012 23:36:31 : INFO  : Run end  : Sat Jan  7 23:36:29 GMT 2012
