Phyre 2 alignment of P52095 with c3mwyW_

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Job Description | P52095
Confidence | 37.27% | Date | Thu Jan 5 12:05:15 GMT 2012
Rank | 379 | Aligned Residues | 30
% Identity | 20% | Template | c3mwyW_
PDB info | PDB header:hydrolase | Chain: W: PDB Molecule:chromo domain-containing protein 1; | PDBTitle: crystal structure of the chromodomain-atpase portion of the yeast chd12 chromatin remodeler
Resolution | 3.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | V | I | T | N | S | T | Y | D | G | L | L | Y | N | T | D | W | I | K | Q | T | L | D | V | P | S | I | H | F | D | S | A | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Sequence |  | V | L | L | T | . | . | T | Y | E | Y | I | L | K | D | R | A | E | L | G | S | I | K | W | Q | F | . | M | A | V | D | E | A | H
Template Known Secondary structure |  |  |  |  |  | . | . |  | T | T |  |  |  |  | T |  |  |  |  |  | T | S |  |  |  |  | . |  |  |  | T | T | G | G
Template Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 487 | . | . | 490 |  |  | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . |  | 510 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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