BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (516 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77473 Uncharacterized protein ylaB n=106 Tax=Enterobac... 1061 0.0 UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Ent... 740 0.0 UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domai... 541 e-152 UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacte... 321 4e-86 UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobac... 297 8e-79 UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 T... 285 4e-75 UniRef50_Q1LPF0 EAL-containing signal transduction protein n=3 T... 273 2e-71 UniRef50_D0KJQ5 EAL domain protein n=4 Tax=Pectobacterium RepID=... 265 4e-69 UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria R... 262 2e-68 UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xan... 258 3e-67 UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 252 2e-65 UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=... 252 2e-65 UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15... 234 7e-60 UniRef50_B1JFI6 EAL domain protein n=8 Tax=Pseudomonas RepID=B1J... 222 2e-56 UniRef50_C5W0B4 YlbA protein n=5 Tax=Enterobacteriaceae RepID=C5... 221 7e-56 UniRef50_B8KTI7 EAL domain protein n=2 Tax=Gammaproteobacteria R... 219 2e-55 UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 T... 208 5e-52 UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae Rep... 207 1e-51 UniRef50_Q1H3Q9 Putative signaling membrane protein n=1 Tax=Meth... 195 3e-48 UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella Rep... 192 3e-47 UniRef50_C6DIW9 EAL domain protein n=6 Tax=Pectobacterium RepID=... 188 4e-46 UniRef50_C4SZL5 Predicted signal transduction protein containing... 186 2e-45 UniRef50_Q0C635 Putative diguanylate cyclase n=1 Tax=Hyphomonas ... 186 2e-45 UniRef50_B2S9Y1 EAL domain protein n=38 Tax=Brucella RepID=B2S9Y... 184 6e-45 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 174 5e-42 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 174 7e-42 UniRef50_C0QHY0 Signal transduction family protein (GGDEF domain... 173 2e-41 UniRef50_B8CUT1 EAL domain protein n=1 Tax=Shewanella piezotoler... 172 2e-41 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 172 4e-41 UniRef50_A6V5X2 Cyclic diguanylate phosphodiesterase (EAL) domai... 171 4e-41 UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/P... 171 5e-41 UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domai... 171 5e-41 UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase wit... 171 7e-41 UniRef50_D1RIS6 Cyclic diguanylate phosphodiesterase (EAL) domai... 171 8e-41 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 169 2e-40 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 169 2e-40 UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0... 169 2e-40 UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 T... 169 3e-40 UniRef50_B9ZLS8 Response regulator receiver modulated diguanylat... 169 3e-40 UniRef50_C6WN82 Diguanylate cyclase/phosphodiesterase with GAF s... 167 1e-39 UniRef50_B8G486 Response regulator receiver modulated diguanylat... 167 1e-39 UniRef50_A1JST1 Putative membrane protein n=3 Tax=Yersinia RepID... 167 1e-39 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 167 1e-39 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 166 2e-39 UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 166 3e-39 UniRef50_A4XG32 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 166 3e-39 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 166 3e-39 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 165 3e-39 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 165 4e-39 UniRef50_Q5ZVC2 Sensory box protein/GGDEF domain/EAL domain n=6 ... 164 5e-39 UniRef50_A8SXY4 Putative uncharacterized protein n=1 Tax=Coproco... 164 6e-39 UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica ... 164 8e-39 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 164 1e-38 UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photoba... 164 1e-38 UniRef50_A8V1K8 Sensory box protein/GGDEF domain/EAL domain (Fra... 163 1e-38 UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya da... 163 1e-38 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 163 2e-38 UniRef50_B9L5S2 Sensory box/ggdef family protein n=1 Tax=Nautili... 162 2e-38 UniRef50_Q5ZVH1 Rtn protein n=5 Tax=Legionella RepID=Q5ZVH1_LEGPH 162 3e-38 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 162 3e-38 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 162 3e-38 UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 3e-38 UniRef50_B9MNQ0 Diguanylate cyclase/phosphodiesterase n=1 Tax=An... 162 3e-38 UniRef50_B9L066 C-di-GMP phosphodiesterase A n=1 Tax=Thermomicro... 162 3e-38 UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 162 4e-38 UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ed... 162 4e-38 UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 162 4e-38 UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS... 161 4e-38 UniRef50_B1XJQ6 Two-component response regulator; GGDEF domain p... 161 5e-38 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 5e-38 UniRef50_D0HE44 GGDEF family protein n=5 Tax=Vibrio RepID=D0HE44... 161 6e-38 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 6e-38 UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 7e-38 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 160 7e-38 UniRef50_A4CBR3 Predicted signal transduction protein containing... 160 8e-38 UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 160 8e-38 UniRef50_Q6LJ31 Putative uncharacterized protein n=3 Tax=Vibrion... 160 9e-38 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 160 9e-38 UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 9e-38 UniRef50_A4BL55 Predicted signal transduction protein containing... 160 1e-37 UniRef50_Q8ERE5 Nitrogen fixation positive activator n=1 Tax=Oce... 160 1e-37 UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobact... 160 1e-37 UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 1e-37 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 1e-37 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 1e-37 UniRef50_C9XN33 Putative signaling protein n=5 Tax=Clostridium d... 159 2e-37 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 2e-37 UniRef50_Q1IP01 Periplasmic sensor diguanylate phophodiesterase ... 159 2e-37 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 2e-37 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 2e-37 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 159 3e-37 UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sh... 159 3e-37 UniRef50_A6CJY1 Sensory box/GGDEF family protein n=1 Tax=Bacillu... 159 3e-37 UniRef50_A0YBW6 Predicted signal transduction protein containing... 159 3e-37 UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudom... 159 3e-37 UniRef50_A0LUT2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 159 3e-37 UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (... 159 3e-37 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 3e-37 UniRef50_B8H226 CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobac... 159 3e-37 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 159 3e-37 UniRef50_A6TIB7 Putative uncharacterized protein n=1 Tax=Klebsie... 159 3e-37 UniRef50_A3YDR3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 159 4e-37 UniRef50_Q1Z8P6 Putative uncharacterized protein n=1 Tax=Photoba... 158 4e-37 UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas ... 158 4e-37 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 4e-37 UniRef50_C4TR37 Putative uncharacterized protein n=1 Tax=Yersini... 158 4e-37 UniRef50_D0Z2V6 Rtn protein n=1 Tax=Photobacterium damselae subs... 158 4e-37 UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma p... 158 4e-37 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 158 4e-37 UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepI... 158 5e-37 UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zy... 158 5e-37 UniRef50_A6G7D3 Putative uncharacterized protein n=1 Tax=Plesioc... 158 5e-37 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 158 5e-37 UniRef50_A6W9D1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 158 5e-37 UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 158 5e-37 UniRef50_C6C4X5 EAL domain protein n=1 Tax=Dickeya dadantii Ech7... 158 6e-37 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 157 6e-37 UniRef50_Q04855 Uncharacterized protein AZC_3085 n=1 Tax=Azorhiz... 157 6e-37 UniRef50_B5W1G7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Os... 157 7e-37 UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 157 7e-37 UniRef50_Q483U6 Response regulator n=1 Tax=Colwellia psychreryth... 157 7e-37 UniRef50_Q1C186 Diguanylate cyclase/phosphodiesterase n=45 Tax=E... 157 8e-37 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 157 8e-37 UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 ... 157 8e-37 UniRef50_A6SZI8 Uncharacterized conserved protein n=3 Tax=Oxalob... 157 9e-37 UniRef50_UPI0001C377AD response regulator/GGDEF domain/EAL domai... 157 1e-36 UniRef50_C9Y8R2 Putative uncharacterized protein n=1 Tax=Curviba... 157 1e-36 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 1e-36 UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Ar... 157 1e-36 UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=N... 157 1e-36 UniRef50_A9AD14 Signal transduction GGDEF/EAL domain protein n=4... 157 1e-36 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 157 1e-36 UniRef50_B5FFC2 Sensory box/ggdef family protein n=2 Tax=Vibrio ... 157 1e-36 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 157 1e-36 UniRef50_B0G733 Putative uncharacterized protein n=1 Tax=Dorea f... 157 1e-36 UniRef50_Q5P356 Phospholipase A2 family protein n=2 Tax=Rhodocyc... 156 1e-36 UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=As... 156 1e-36 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 156 1e-36 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 156 2e-36 UniRef50_Q3J123 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rh... 156 2e-36 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacte... 156 2e-36 UniRef50_A4C790 Predicted signal transduction protein containing... 156 2e-36 UniRef50_C8WQF9 Diguanylate cyclase/phosphodiesterase with GAF s... 156 2e-36 UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria ... 156 2e-36 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_C3RI80 Putative uncharacterized protein n=1 Tax=Mollicu... 156 2e-36 UniRef50_A3WM41 Signaling protein with a ligand binding sensor d... 156 2e-36 UniRef50_A6AUF8 Cyclic diguanylate phosphodiesterase (EAL) domai... 156 2e-36 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 156 2e-36 UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotole... 156 2e-36 UniRef50_B6BJN9 Sensory box sensor/ggdef/eal domain protein n=2 ... 156 2e-36 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 155 2e-36 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 155 2e-36 UniRef50_A0YU61 Putative diguanylate cyclase/phosphodiesterase (... 155 2e-36 UniRef50_C7QII4 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 3e-36 UniRef50_Q15NC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 155 3e-36 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 155 3e-36 UniRef50_Q47CB3 Response regulator receiver modulated diguanylat... 155 3e-36 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 3e-36 UniRef50_C6XNM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hi... 155 3e-36 UniRef50_Q2SG37 Predicted signal transduction protein containing... 155 3e-36 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 155 3e-36 UniRef50_A0NVG4 Putative uncharacterized protein n=1 Tax=Labrenz... 155 3e-36 UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_C6WMG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 155 4e-36 UniRef50_A0YCW7 Signal transduction protein containing a membran... 155 4e-36 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_C8WJV1 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 5e-36 UniRef50_D0L1D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 5e-36 UniRef50_A4C7A0 Putative uncharacterized protein n=1 Tax=Pseudoa... 155 5e-36 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 5e-36 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 5e-36 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 154 5e-36 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 5e-36 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 5e-36 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 5e-36 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 154 6e-36 UniRef50_C8X1L9 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 6e-36 UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 7e-36 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 7e-36 UniRef50_C6N1K4 Putative uncharacterized protein n=1 Tax=Legione... 154 7e-36 UniRef50_A3WLN6 Putative GGDEF domain membrane associated protei... 154 7e-36 UniRef50_Q1GRA4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sp... 154 7e-36 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 154 7e-36 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 7e-36 UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp... 154 7e-36 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 154 8e-36 UniRef50_A3D8U3 Diguanylate cyclase/phosphodiesterase with GAF s... 154 8e-36 UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_A0YP30 Putative uncharacterized protein n=1 Tax=Lyngbya... 154 8e-36 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 8e-36 UniRef50_C9RNS7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fi... 154 9e-36 UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction ... 154 1e-35 UniRef50_B7KI79 Response regulator receiver modulated diguanylat... 154 1e-35 UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_C9XPW5 Putative signaling protein n=5 Tax=Clostridium d... 154 1e-35 UniRef50_Q21RH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 1e-35 UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 1e-35 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 153 1e-35 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 153 1e-35 UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 153 1e-35 UniRef50_A4BNI1 Putative signal transducer protein with histidin... 153 1e-35 UniRef50_A3XSN8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 153 1e-35 UniRef50_Q082T6 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 153 2e-35 UniRef50_Q73DV7 Sensory box/GGDEF family protein n=76 Tax=Bacill... 153 2e-35 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 153 2e-35 UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum s... 153 2e-35 UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya... 153 2e-35 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 153 2e-35 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 153 2e-35 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 153 2e-35 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 153 2e-35 UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH 153 2e-35 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_A1KBS5 Conserved hypothetical signaling protein n=1 Tax... 153 2e-35 UniRef50_B0C4N3 Diguanylate cyclase/phosphodiesterase with EAL d... 153 2e-35 UniRef50_C1F918 Sensory box/GGDEF family protein n=1 Tax=Acidoba... 153 2e-35 UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinoco... 152 2e-35 UniRef50_B8K6V6 Signal transduction protein n=3 Tax=Vibrio RepID... 152 2e-35 UniRef50_B6BL35 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ep... 152 2e-35 UniRef50_B7VQ16 Putative uncharacterized protein n=1 Tax=Vibrio ... 152 2e-35 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 152 2e-35 UniRef50_B8HEA5 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 2e-35 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 152 2e-35 UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 2e-35 UniRef50_C5BT20 Ggdef domain/eal domain protein n=1 Tax=Teredini... 152 2e-35 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 2e-35 UniRef50_A6W234 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 152 2e-35 UniRef50_C4T5P6 Phosphodiesterase n=8 Tax=Yersinia RepID=C4T5P6_... 152 2e-35 UniRef50_A6WEC0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ki... 152 2e-35 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_Q2SEE7 FOG: EAL domain n=2 Tax=Hahella chejuensis KCTC ... 152 3e-35 UniRef50_Q21N07 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 152 3e-35 UniRef50_A8IEV4 Putative sensory box/GGDEF family protein n=1 Ta... 152 3e-35 UniRef50_C3MGW2 Putative sensory box/GGDEF family protein n=2 Ta... 152 3e-35 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_C8SP16 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 152 3e-35 UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT 152 3e-35 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 3e-35 UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YK... 152 3e-35 UniRef50_Q18BZ5 Putative signaling protein n=8 Tax=Bacteria RepI... 152 4e-35 UniRef50_B8HNN4 Response regulator receiver modulated diguanylat... 152 4e-35 >UniRef50_P77473 Uncharacterized protein ylaB n=106 Tax=Enterobacteriaceae RepID=YLAB_ECOLI Length = 516 Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/516 (100%), Positives = 516/516 (100%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK Sbjct: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP Sbjct: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA Sbjct: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH Sbjct: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV Sbjct: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI Sbjct: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY Sbjct: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS Sbjct: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL Sbjct: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 >UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Enterobacteriaceae RepID=D2TLT3_CITRO Length = 516 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/516 (67%), Positives = 415/516 (80%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M TRHLV L +GVLILS+++PVGLSIWLA +QVE FIEELD YS+ V R +V Q K Sbjct: 1 MTTRHLVSLAAGVLILSIIVPVGLSIWLAQRQVEKKFIEELDNYSALVYERTERVVQQAK 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 ALQE+E+ C+ HL+ MRR+S+SYRY+QEV Y+++N P+CSSLE ES FP P Sbjct: 61 KALQEIEKVDVTPCTHDHLLAMRRISFSYRYVQEVLYLEDNAPRCSSLEQESHSVVFPPP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 +IS DGYR W T HNDLGI RYM A+G Y+VMIDPASFIDV+P+ +WQID AIIG Sbjct: 121 QRISADGYRAWFTKHNDLGIERYMTALGKGRYIVMIDPASFIDVVPFGAWQIDVAIIGAK 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 N VI SSD + I+ Q+T +E +G IY I P PEM ISI++WAS L W+ Sbjct: 181 QNSVIASSDALPPAILQYTQQTTPRQLERHGNIYVIRPFPEMGISIVSWASRHPLDNIWY 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 RQ IW+P G+ GLLAA+ + RILRR+QSPHHRL+DAI NR+I VHYQP+VSLA+GK+V Sbjct: 241 RQALIWIPAGIAPGLLAAVLIFRILRRLQSPHHRLRDAIHNRNIKVHYQPVVSLASGKVV 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARWPQ DG +LSPD FIPLA+QTGL+EPLT LII +VFE+MG WLRQHP+QHISI Sbjct: 301 GAEALARWPQPDGCYLSPDFFIPLAEQTGLTEPLTRLIIETVFEEMGKWLRQHPEQHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 N+ES L SEK+P LL ++N +Q+ P QIALELTEREFADPKTS+PI++RYR+AGH +Y Sbjct: 361 NIESEDLASEKLPALLSTLLNRHQIAPSQIALELTEREFADPKTSSPIVARYRKAGHAVY 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 +DDFGTGYSSLSYLQ+L+VDILKIDKSFVDALEYKNVTPHIIEMAK LKLKM+AEGIET+ Sbjct: 421 IDDFGTGYSSLSYLQNLEVDILKIDKSFVDALEYKNVTPHIIEMAKALKLKMIAEGIETA 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 KQEEWLRQHGVHYGQGWLYSKALPK +F+ WAE+ L Sbjct: 481 KQEEWLRQHGVHYGQGWLYSKALPKAEFILWAEKRL 516 >UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=6 Tax=Enterobacteriaceae RepID=B5Y0R4_KLEP3 Length = 519 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 276/516 (53%), Positives = 363/516 (70%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MRTRHLV L +GVLIL+++LP+ LSIW A +Q + F ELD YS+R+ +R +VA Q + Sbjct: 1 MRTRHLVALFTGVLILAIILPISLSIWQAARQAKLQFYRELDDYSNRIVVRTLQVADQAR 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 +AL+E + A+CS HL+ +RR++Y++RYIQEV ++ ++VPQCSSLE S TFP P Sbjct: 61 EALREADSHTAASCSPEHLLTLRRIAYTHRYIQEVLWLRDSVPQCSSLEDHSVAVTFPPP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 I+ DGYR WLTS NDLG+ M AMG+ ++VMIDP SFIDV+P S +I + G Sbjct: 121 DHIAPDGYRTWLTSINDLGLNHQMTAMGSQQHMVMIDPISFIDVVPASEEKIHTMLFGLD 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 H ++ SS + + R++ + + +Y I +PE+ I+TW+ST LQ+ Sbjct: 181 HLKMVISSQPLPDTVWQRIKDPHVNMLTLDNTVYRIQRIPELGSGIVTWSSTLPLQQRIR 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 +Q+ WLP+G+ LLA +LR+LR ++SP + + DA+ + I V+YQPI+SL +GKI Sbjct: 241 QQLIFWLPVGIFTSLLATWLLLRLLRHLRSPRNSMLDALNSEAIQVYYQPIISLQDGKIA 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARW Q DG++LSPD FIPLA+QTGL LT I+R +F D+G WLRQ P+ HISI Sbjct: 301 GAEALARWQQPDGTFLSPDIFIPLAEQTGLITQLTEDIVRKIFTDLGPWLRQRPEVHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NL L S +P LL D + H+ + QI LE+TER F DP+T+ P+I+ YR+AGH I Sbjct: 361 NLSVDDLRSPTLPTLLHDQLQHWGIAAEQIILEITERGFVDPETTMPVIAHYRQAGHRIS 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 +DDFGTGYSSLSYLQ LDVD LKIDKSFVD LEY+ +TPHIIEMAK L L VAEG+ET Sbjct: 421 IDDFGTGYSSLSYLQKLDVDTLKIDKSFVDTLEYRPLTPHIIEMAKALNLATVAEGVETE 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 Q +WLRQHGV Y QGWLYSKALPKE F+ WAE +L Sbjct: 481 SQRDWLRQHGVQYAQGWLYSKALPKEQFILWAENNL 516 >UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacteriaceae RepID=C9Y1D6_CROTZ Length = 536 Score = 321 bits (823), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 182/528 (34%), Positives = 288/528 (54%), Gaps = 28/528 (5%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 R R ISG+ I+ VLLPV L++W+AH + LDT++ V R V + + Sbjct: 4 FRARRQALRISGI-IMVVLLPVMLALWIAHHRAVNETRAHLDTFAQLVLNRTELVLSHVE 62 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 + E E++QG CS AH M +S +I+++ Y + CS+L F +P Sbjct: 63 ETRNEAEKYQGEICSSAHQRNMLDISRGQIFIEDLIYAQGDELLCSTL--------FDQP 114 Query: 121 GKISKDGYRVWLTSHNDLGIIRY----------MVAMGTAHYVVMIDPASFIDVIPYSSW 170 +S Y T D+ Y M+ + +YV +++P SF +++ S Sbjct: 115 FILSPANY----TRTPDVAYYYYRDTPFFSGHKMIYLRKGNYVAVVNPLSFSEILS-SDA 169 Query: 171 QIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWA 230 I + + S++ ++ + +G + I+ + I++ Sbjct: 170 TISYGVYDTVTREFFSVSEKADARAFAPFARSQNADFQKDGRFWSIVLSGKRPIAVAVST 229 Query: 231 STKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQP 290 S + W RQ+ + LPLGL++G L R R SP +LQ A++ R + +HYQP Sbjct: 230 SDAWFWQAWRRQMSVMLPLGLIMGGLLVFLGSRTRNRFNSPGRQLQRALQKRALRLHYQP 289 Query: 291 IVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL 350 I+ + +G VGAEAL RWP +G +SP FIPLA++TG+ +T ++ +F D+G +L Sbjct: 290 IMDIKHGMCVGAEALLRWPGYNGQVMSPAEFIPLAEKTGMIAQVTDYVVEELFNDLGHFL 349 Query: 351 RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIIS 410 HPQ +ISINL + S ++ L+ + + V +QI +E+TER F D + P+I Sbjct: 350 ATHPQIYISINLSASDFHSSRLIALIEGKNSQHGVRAQQIKIEVTERGFIDVPRTTPVIQ 409 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAK 466 +R++G EI +DDFGTGYS+L L L+VDILKIDKSF+D L + + HII+MA+ Sbjct: 410 AFRQSGFEIAIDDFGTGYSNLHNLYSLNVDILKIDKSFIDTLTTNSTSHLIAEHIIDMAQ 469 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +L+LK++AEG+ET++Q WL + GV Y QGW +SKALP+++F+ W +Q Sbjct: 470 SLRLKIIAEGVETAEQVGWLLKRGVQYCQGWHFSKALPRQEFVAWLQQ 517 >UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobacteriaceae RepID=YJCC_ECOLI Length = 528 Score = 297 bits (760), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 178/528 (33%), Positives = 277/528 (52%), Gaps = 28/528 (5%) Query: 2 RTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKD 61 R RH + + G++ L VL P+ LS+W+A ++ +L T++ ++ V Q Sbjct: 4 RARHQLLALPGIIFL-VLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQADL 62 Query: 62 ALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHE------SPPD 115 ER+QG C+ AH M + Y YI E+ Y +N CSSL +P D Sbjct: 63 VSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAPAD 122 Query: 116 TFPEPGKISKDGYR--VWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVI---PYSSW 170 EP +S YR + + + M M +YV +I+P + +V+ P W Sbjct: 123 YKREPN-VSIYYYRDTPFFSGYK-------MTYMQRGNYVAVINPLFWSEVMSDDPTLQW 174 Query: 171 QIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWA 230 + + S E + + L ++ NG +Y + + I+ I Sbjct: 175 ----GVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVAT 230 Query: 231 STKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQP 290 S + L ++ + LP G++ L+ + LRI + SP +LQ A+E +C++YQP Sbjct: 231 SYQRLITHFYNHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQP 290 Query: 291 IVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL 350 I+ + K +GAEAL RWP G ++P FIPLA++ G+ E +T +I +VF D+GD+L Sbjct: 291 IIDIKTEKCIGAEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGDYL 350 Query: 351 RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIIS 410 H +++SINL + + ++ + Y V P+QI E+TE F D PII Sbjct: 351 ATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIIL 410 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAK 466 +R+AG+E+ +DDFG GYS+L L+ L+VDILKIDKSFV+ L + HIIE+A Sbjct: 411 AFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAH 470 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +L LK +AEG+ET +Q WLR+ GV Y QGW ++KA+P + F++W EQ Sbjct: 471 SLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQ 518 >UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 Tax=Proteobacteria RepID=Q1LCJ1_RALME Length = 529 Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 169/504 (33%), Positives = 265/504 (52%), Gaps = 22/504 (4%) Query: 16 LSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACS 75 L+ L PVG+ +++A + ++L ++ RA V TQ +ALQ++E + C+ Sbjct: 16 LATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAINALQDMEMLREEPCT 75 Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGK--ISKDGYRVWLT 133 A+L+++RR++Y+Y YIQ+ CS+L P P P + DG W Sbjct: 76 PANLVQLRRITYTYSYIQDAGIYRAGKRLCSALLGPIEPGQLPLPPPDWRTPDGLDYWFD 135 Query: 134 SHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQ 193 R++V +G V +D F+DV+ S + A++ + +++ Q Sbjct: 136 QPVPFNAQRHVVLIGRNGNNVGLDSQVFVDVVDRESRML--AVVQTDAGRIFSAT----Q 189 Query: 194 GI-ITRLQKTPGEHIENNGIIYD--------ILPLPEMNISIITWASTKMLQKGWHRQVF 244 G +TRLQ+ EH +G + M ++++ A L W + Sbjct: 190 GANLTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLAPRAALLANWKSLLI 249 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 L +GL G+ + V R R S L+ A+ ++ VHYQPI SLA+ VG EA Sbjct: 250 GGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQPIASLADNHWVGVEA 309 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLES 364 L RW + +G + P+ FIP+A+ GL + +T ++ + ++G LR+ P ++SIN+ Sbjct: 310 LVRW-RRNGRLVRPNLFIPMAENAGLIQQITDQVLDIILSELGTLLRRFPSFYVSINVGV 368 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDF 424 L S + +L + + P+QI +E TER F +P + I +R+AGH +Y+DDF Sbjct: 369 EDLKSRRFLSVLNARLRGSGIAPQQIRIEATERGFLEPDVARDTIQAFRDAGHPVYIDDF 428 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYLQ VD LKIDKSFVD + V PHII MA++L L+++AEGIE Sbjct: 429 GTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQSLGLQVIAEGIEDK 488 Query: 481 KQEEWLRQHGVHYGQGWLYSKALP 504 Q ++LR+ GV YGQGWL+ + +P Sbjct: 489 MQADFLREQGVDYGQGWLFGRPMP 512 >UniRef50_Q1LPF0 EAL-containing signal transduction protein n=3 Tax=Burkholderiaceae RepID=Q1LPF0_RALME Length = 530 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 167/503 (33%), Positives = 269/503 (53%), Gaps = 12/503 (2%) Query: 16 LSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACS 75 L+ ++PV S+++A + VE E+ ++++ +RA V +Q AL +L++ GA CS Sbjct: 17 LATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQAFAALNDLDQQPGAPCS 76 Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSL--EHESPPDTFPEPGKISKDGYRVWLT 133 +L RV Y+YRY+Q+ + + CS L + + T P P + +GY +W Sbjct: 77 PPNLEHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRAKDLTLPPPDYQNNEGYSMWFR 136 Query: 134 SHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQ 193 + L R + +G V ID S++D+I + I A I + +++ + Sbjct: 137 RKSPLSNERNDLQIGRNGRYVSIDRGSYVDLIDPAKRPIAAIQIPTGTLIAVSTGAD--P 194 Query: 194 GIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVI 253 G + K G +++++ Y + I+++ + + W + + WL +G+ Sbjct: 195 GDMLNAWKQSG-NVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWPKLLAAWLSIGVTA 253 Query: 254 G-LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 G LL + RI + P L+ AI R I V YQPI+ +A+ + VG EAL RW Sbjct: 254 GALLGWLAYKRISWQFSFPAT-LEWAISRRKIDVVYQPIIRIADNECVGVEALTRW-TLH 311 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKI 372 G +SP+ F+ +A++ L + LT +++ +G L +P ++SIN+ S L S + Sbjct: 312 GQSISPEVFVRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFYVSINVSSEDLRSVRF 371 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 L + + PRQI +E TER F + + + +I+ +R AGH IY+DDFGTGYSSLS Sbjct: 372 LNQLTSSLAGTGIAPRQIRIEATERSFMNTEETRGVIAAFRAAGHPIYIDDFGTGYSSLS 431 Query: 433 YLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YLQ ++D+LKIDKSFVD +E V PHII MA + L++VAEG+E++ Q WL + Sbjct: 432 YLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIVAEGVESAVQIAWLLE 491 Query: 489 HGVHYGQGWLYSKALPKEDFLRW 511 GVHY QGW Y+KA+ W Sbjct: 492 RGVHYAQGWYYAKAMTASTLAPW 514 >UniRef50_D0KJQ5 EAL domain protein n=4 Tax=Pectobacterium RepID=D0KJQ5_PECWW Length = 540 Score = 265 bits (676), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 163/482 (33%), Positives = 259/482 (53%), Gaps = 18/482 (3%) Query: 37 FIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVA 96 F E+++T+S+ A ++ Q AL +LE ++ C + HL +R+V+Y YIQ+V Sbjct: 48 FEEDVETFSTLTLEHAGEIMAQATSALDKLEEYRLPYCEDPHLNMLRKVAYDNDYIQDVV 107 Query: 97 YIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMI 156 YID N P+CSS+ ++ P+P + K Y VW + L + M+ +G H+ V++ Sbjct: 108 YIDGNRPRCSSMLNDINTLFLPKPDFVYKSVYGVWYNVESPLNRNKRMIYVGATHHFVVL 167 Query: 157 DPASFIDVIPYSSWQIDAAIIG-NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGII-- 213 +P SF+D IP S I ++ N + SD I + RL GE+ + I Sbjct: 168 NPRSFLD-IPSHSHNIRCTLLERKKKNGQVILSDSIDGSVFPRL--ITGENRADRFYIDS 224 Query: 214 --YDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRR---I 268 Y + PL N++++ A + R + I+ + L + + I RR I Sbjct: 225 KYYVLKPLSNSNLALVVSADKPV---STTRYLTIFFSSLPLFFLFSLLLSTLISRRTLTI 281 Query: 269 QSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQT 328 QSP + L A++ ++ +HYQPI+ L ++VG EAL RW +DG + PDSFIP+ +Q Sbjct: 282 QSPRYVLNQALKQKEFKLHYQPIIELNTAQVVGCEALIRWCHSDGRVIMPDSFIPMIRQV 341 Query: 329 GLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 GL + +TL +I + + +P+ +SINLE+ I L + I + + Sbjct: 342 GLMKAMTLYVIDEALQTACVLKKSYPEMFVSINLEAAEFEDISIFNYLVEYIAVHGLEGT 401 Query: 389 QIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 I +ELTE +P+ + ++ Y++ ++ +DDFGTGY+ LSYL+ + + LKIDKSF Sbjct: 402 NINVELTESSMIEPQKAGLMVELYQQKSIDVAIDDFGTGYAGLSYLERVKANKLKIDKSF 461 Query: 449 VDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + + V HI+ MA L ++VAEG+ET QE +L+ GV Y QGWLYSKAL Sbjct: 462 VWNINNHSPGDIVLSHIVSMAHCLNQQIVAEGVETLIQETYLKSLGVAYAQGWLYSKALT 521 Query: 505 KE 506 +E Sbjct: 522 QE 523 >UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria RepID=A5VAG1_SPHWW Length = 537 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 179/520 (34%), Positives = 260/520 (50%), Gaps = 26/520 (5%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MR R ++ + + + IL+ LLP+ L + + ++ Y+ IRAN+V + Sbjct: 1 MRRRTILIIAACLAILAGLLPMVAVAHLLRVRAVAAEQRHMEEYARWTLIRANQVFADAR 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEH------ESPP 114 L E G CS H+ +R+++ R ++++ Y + C+SL +PP Sbjct: 61 RTLLAAEVPPGTECSPEHVARLRQIAMDARSVEDIGYFRDGRLACTSLGPVGQRVPRTPP 120 Query: 115 DTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDA 174 D G+ V + M+AM Y +I P +DV+ S + Sbjct: 121 DLR------LGGGFAVIFHLQPRTFRSQPMLAMSHGGYTALIKPERLVDVLTDSHMTLG- 173 Query: 175 AIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDI--LPLPEMNISIITWAST 232 I +I S ++ L P I+++ + + PL S A Sbjct: 174 --IAAGPGRLIALSGRTDPQLLRTLIAGPTAGIDDHHVFASLREAPLTAFAFSDRAQALG 231 Query: 233 KMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 ++ L L++GL V+ + R+ SP L AI R+ VHYQPI+ Sbjct: 232 RLRNDYLLLLPMGLLVSTLLVGL-----VIWVSRQRLSPEKELAIAIRKREFVVHYQPII 286 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 L+NG+ V AEAL RW + DG W+ PD FIPLA++TGL PLT L+I V ED LR Sbjct: 287 DLSNGRCVAAEALLRWRRPDGRWIGPDLFIPLAEETGLISPLTDLLIERVIEDQAALLRA 346 Query: 353 HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRY 412 HISIN+ + L S + +L + + V P QI +E TE+ F + +A + Sbjct: 347 DRDLHISINISARDLESGRFLPVLTEAVTRSGVAPSQIWIEATEQGFIRAEIAAGAVEAA 406 Query: 413 REAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTL 468 R AGH + +DDFGTGYSSLS LQ L +D LKIDKSFV+A+ VTPHII+MA L Sbjct: 407 RAAGHMVAIDDFGTGYSSLSLLQGLPLDALKIDKSFVEAIATDAATSVVTPHIIDMAHGL 466 Query: 469 KLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 KL+++AEG+ET +QE +LR GV QGWLYS ALP +F Sbjct: 467 KLRIIAEGVETREQEAYLRAAGVRLAQGWLYSHALPASEF 506 >UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xanthomonas RepID=Q3BN81_XANC5 Length = 520 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 172/528 (32%), Positives = 268/528 (50%), Gaps = 28/528 (5%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQV---ETSFIEELDTYSSRVAIRANKVAT 57 M+ + ++ + +++LS LP+GLS +LA + E + +L S R R Sbjct: 1 MKRQRIISVTVLLVLLSATLPIGLSYYLAWRLALAREEGRLSQLAALSIR---RTETAFD 57 Query: 58 QGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTF 117 + AL + + CS HL +MR + + YI E+ C+S +T Sbjct: 58 EAHGALLSMAASRLPPCSPPHLAQMRALVLTSHYIVELGRFQQGRLSCTSWGQLR--NTI 115 Query: 118 PEPGK--ISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAA 175 P+ + K G V R ++A+ Y +I+P + D+ Q+ Sbjct: 116 PQRTADFVVKRGIAVTTRLLPLANPQRPLMALQLGDYNALINPDTLADINIPPGLQL--- 172 Query: 176 IIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKML 235 IG +++S+ A+ ++T P + ++ +L + WA+ Sbjct: 173 AIGTPDGQILSSTGTAAERLLT---DPPATREPGDLLLSQVLFGRDRRGD---WAAVVTE 226 Query: 236 QKGWHRQVFI-----WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQP 290 + R +P+G+ + LL VL + RR SP RL+ A++ + VHYQP Sbjct: 227 PVAYLRGPLAAARLQLVPVGIAVALLLVGAVLWVSRRRLSPLARLEIAVQRGEFIVHYQP 286 Query: 291 IVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL 350 I++L +G VGAEAL RW Q DG + PD+FIPLA+Q+GL P+T L++ V ++G L Sbjct: 287 IIALDSGACVGAEALVRWQQPDGVLVPPDAFIPLAEQSGLILPITDLVVAEVIRELGPTL 346 Query: 351 RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIIS 410 P H++IN+ + + S ++ +L + V+ Q+ +E TER D + I+ Sbjct: 347 AADPALHVAINVSADDIKSGRVQGVLAQALRGTGVDSGQLWVEATERSLMDIDAARTTIT 406 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAK 466 R AGH + +DDFGTGYSSL YLQ L +D LKIDKSFVD + VT HIIEMAK Sbjct: 407 HLRGAGHTVSIDDFGTGYSSLQYLQGLPLDALKIDKSFVDTIGTHSATSAVTAHIIEMAK 466 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 TL+L+ +AEG+E +Q ++LR HGV QGWL+S+ALP F+ + Q Sbjct: 467 TLRLRTIAEGVERQEQLDYLRAHGVDLAQGWLFSRALPATGFIAYYAQ 514 >UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 Length = 530 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 153/476 (32%), Positives = 242/476 (50%), Gaps = 10/476 (2%) Query: 40 ELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYID 99 +L +++ R + + AL + + CS+ H+ +++R++ R I E+ Y D Sbjct: 40 QLTLFATYAIERTDTTFSGVSQALMQTQMLTDKPCSKEHMDDLKRIAIETRPITEIGYFD 99 Query: 100 NNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPA 159 + + +C+S P +++G +V L + M+ + Y ++IDP Sbjct: 100 DGLLKCTSWGMAGMRVAAGTPAFTTRNGVKVVLNMTASIPTTANMLGLQRGAYCILIDPK 159 Query: 160 SFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPL 219 F+D I QI A + V+ + + +I + K + + + Sbjct: 160 WFVDEIVPKGVQIAVA---SPDGTVVAALNHPDPAVIRQFLKPSDTKPPSRYLGAVVRGS 216 Query: 220 PEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI 279 I+I AS + ++ ++LP+ VI + + + RR S L AI Sbjct: 217 DWTAIAITPRAS---IWTSMQEELLVFLPIAGVISTGMVILTIWLSRRRLSLRGELAIAI 273 Query: 280 ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLII 339 R+ V YQP++ L G VGAEAL RW + DG+ + PD FIP+A+ + + +T ++ Sbjct: 274 RRREFTVVYQPLIELKTGICVGAEALVRWRRPDGAMVMPDLFIPIAENSKMISQITEQVV 333 Query: 340 RSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF 399 + D+GD L H++IN+ L +I +++ I + QI LE TER F Sbjct: 334 ANTVRDLGDVLAADEALHVAINMADDDLAQGRILTVVQRAIRGTGIRTEQIWLEATERGF 393 Query: 400 ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVT- 458 DPK++ II + RE GH I +DDFGTGYSSL YLQ+L VD LKIDKSF+ L + T Sbjct: 394 MDPKSTRTIIEKARELGHSIAIDDFGTGYSSLHYLQELPVDTLKIDKSFISTLGTDSATS 453 Query: 459 ---PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 HII MAK+L L +VAEGIE +Q ++L HGV +GQGWLYS LP ++F+ + Sbjct: 454 PIAAHIIAMAKSLDLIIVAEGIERQEQADYLIAHGVQFGQGWLYSPPLPAQEFIEF 509 >UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=B4SIA4_STRM5 Length = 538 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 155/470 (32%), Positives = 261/470 (55%), Gaps = 14/470 (2%) Query: 48 VAIRANKVATQG-KDALQELERWQGAA---CSEAHLMEMRRVSYSYRYIQEVAYIDNNVP 103 +A RA + + Q DAL L+ + A CS H+ M+ + + I ++ Y + Sbjct: 44 IAGRALRRSDQSYHDALAALKSAEAGAHVPCSPDHIQRMQTLVMTTPSIDQMGYFEGGTL 103 Query: 104 QCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFID 163 +C+S P+ ++ +G + + + R ++++ Y V++DP F+D Sbjct: 104 RCTSWGPFLADVKQPKADHVTSEGAGIAVDVRPEASGRRQVLSILYGAYDVLVDPRRFVD 163 Query: 164 VIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN 223 VI + ++ + + ++ D + ++ L + PGE +++N +Y E Sbjct: 164 VIADPNVRL---ALASPDGRLLAKQDGMDPALLETLLRNPGEGLDHN-TLYATARNGEW- 218 Query: 224 ISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I T T L + +Q ++++PLGL++ + A V+ + RR S L AI R+ Sbjct: 219 LAIATTPRTA-LAATFRQQAWLYVPLGLLMAAVGAGLVIWLSRRRLSLRGELATAIRRRE 277 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + +HYQPI+ L G VGAEAL RW + DG+ + PD FIPLA++TG+ +T L+I +V Sbjct: 278 LYLHYQPIIELDTGICVGAEALIRWQRQDGTQVRPDLFIPLAEETGMIGAITDLVIENVV 337 Query: 344 EDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK 403 DM + L HI+INL + ++S + +L+ + + P+QI +E TE F D Sbjct: 338 RDMRELLVADRSAHIAINLAAEDISSGRALKLIAKHMAGSGILPQQIWMEATEHGFLDLD 397 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTP 459 + ++++ R AGH + +DDFG G+SSL YL+ L +D LKIDKSF+DA+ ++ VTP Sbjct: 398 RARTMLAQARRAGHSVAIDDFGVGFSSLQYLEQLPLDALKIDKSFIDAIGTESATSPVTP 457 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 HII+MAK L L +VAEG+ET Q +L V + QGWL+S+ LP+++F+ Sbjct: 458 HIIDMAKELGLWVVAEGVETEAQLAYLHTRKVEFAQGWLFSRPLPRDEFV 507 >UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15_SYNE7 Length = 525 Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 164/527 (31%), Positives = 261/527 (49%), Gaps = 46/527 (8%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELD--TYSSRVAIRAN-KVAT 57 M+ R+ + G + ++ LP +SI +A ++ + I E + ++R +R++ K A Sbjct: 1 MKKRNALIFAVGTSVFAIALPTLISINIASRE---ALIGEQNYMLATARGLLRSSEKAAD 57 Query: 58 QGKDALQELERWQGA-ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHES---- 112 Q +EL Q C + MR++ + YIQ + Y+ N CSS+ +S Sbjct: 58 QVDKGFKELRALQSVQTCDPEQIQVMRKIDLASAYIQAIGYVSGNKLVCSSMGKDSLDLG 117 Query: 113 PPDTF-PEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQ 171 P D P K+ ++ + + A G V+ D SF VI Sbjct: 118 PVDIVQPSGAKLRRN--------------VEFDFAKGLKFIVIERD--SFAAVI---QKD 158 Query: 172 IDAAIIGNAHNVVITSSDE------IAQGII-----TRLQKTPGEHIENNGIIYDILPLP 220 + I + N+ IT+ + A+G I + L + G I + Sbjct: 159 VPLDISKDIENISITTLSKSNPETLTARGFIDPKWISALNNQQESTFIDKGHIIAAVSSQ 218 Query: 221 EMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIE 280 + + L +I +P+G++ G++ + V+ LR + ++ AI+ Sbjct: 219 RYFLGAVVATPVTGLASRTRAIAWIIVPVGILAGIILWLSVIYFLRGQLALPAVIKTAIK 278 Query: 281 NRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIR 340 R+ + YQPIV+L G VGAEAL RW + DG ++PD FIP+A+ +GL + +T I+ Sbjct: 279 RREFFLTYQPIVNLQTGDWVGAEALVRWKRPDGKTMAPDIFIPVAEDSGLIQLITEYIVE 338 Query: 341 SVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA 400 ++ + + + P+ HI INL + L + + L+R + P + +E TER F Sbjct: 339 TLSREAIGFFDEFPRFHIGINLSAADLHTPQTVSLMRKVAKATSAKPGSLIVEATERGFT 398 Query: 401 DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKN 456 DPK + +IS R G ++ +DDFGTGYSSLSYL++L++D LKIDKSFVD + N Sbjct: 399 DPKLANGVISSLRADGIQVAIDDFGTGYSSLSYLENLELDYLKIDKSFVDTIGRDTATSN 458 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 V HIIE+AKTL L MVAEG+ET Q +LR GV Y QGW ++K + Sbjct: 459 VVTHIIEIAKTLDLMMVAEGVETELQANFLRNRGVQYAQGWFFAKPM 505 >UniRef50_B1JFI6 EAL domain protein n=8 Tax=Pseudomonas RepID=B1JFI6_PSEPW Length = 542 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 158/505 (31%), Positives = 252/505 (49%), Gaps = 37/505 (7%) Query: 25 SIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRR 84 SI +A QQ++ S +++ R R +V Q ++ + +L+ C+ A L +++ Sbjct: 37 SIGIALQQMKQSESAQMNAQGERFLDRLEQVFGQLREGVDDLQAQPLRGCNPAMLALLQQ 96 Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESP--PDTFPEPGKISKDGYRVWL--TSHNDLGI 140 V R+I E AY+D NV CS+ P P+ I Y WL T+ + + Sbjct: 97 VGLGSRFIYEAAYVDVNV-ACSNRGGARAFVPTRAPD---IQGPTYSYWLNTTTEPNENL 152 Query: 141 IRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQ 200 M+A G +++V DV+ G + VV+ + + Sbjct: 153 AALMLARG--NFLVSTSRGHLTDVVDLPP--------GGSLLVVLDNGTRAIPVLGPPQV 202 Query: 201 KTPGEHIE----------NNGIIYDILPL-PEMNISIIT-WASTKMLQKGWHRQVFIWLP 248 P EH ++ ++Y +L P+ + +I AS + G +++ P Sbjct: 203 WPPAEHWPPPSGNSLFELHDRLVYRMLTKSPDYQLVLIAPRASLPLRMNG---MLWLLFP 259 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 ++ VL+++ + +S LQ+A+ ++ V YQPI+ L + + VGAEAL RW Sbjct: 260 GSVLAACCIGWLVLQLILQRRSMSSELQNALRRGELQVLYQPIIELDSRRCVGAEALVRW 319 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLT 368 + DG+ SPD FIPLA+ TG +T +++ V E +G LR H +IS+NL + + Sbjct: 320 RRPDGTLTSPDLFIPLAENTGQIRQITDFVLQRVLEQLGQLLRSHRNLYISVNLAACDVM 379 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGY 428 +I ++ ++ ++V QIA E+TER D + + R GH++ +DDFGTGY Sbjct: 380 VPRIGRVAARLLALHRVAASQIAFEVTERGLIDVVVARDNLQALRAVGHQVLIDDFGTGY 439 Query: 429 SSLSYLQDLDVDILKIDKSFVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SL+YLQ L VD LKIDK+F+DAL + V PHII MA L L+++AEGIE Q Sbjct: 440 CSLAYLQTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHDLHLRVIAEGIECEAQAV 499 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFL 509 L GV+YGQGWL++ L F+ Sbjct: 500 LLNSEGVNYGQGWLFAHPLNARQFV 524 >UniRef50_C5W0B4 YlbA protein n=5 Tax=Enterobacteriaceae RepID=C5W0B4_ECOBB Length = 112 Score = 221 bits (562), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 107/109 (98%), Positives = 108/109 (99%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 +RTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK Sbjct: 3 VRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 62 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLE 109 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEV YIDNNVPQCSSLE Sbjct: 63 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLE 111 >UniRef50_B8KTI7 EAL domain protein n=2 Tax=Gammaproteobacteria RepID=B8KTI7_9GAMM Length = 528 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 161/513 (31%), Positives = 257/513 (50%), Gaps = 22/513 (4%) Query: 6 LVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQE 65 +V +++ V ++ +L +G W A +Q + L + R+ RA V T + L+ Sbjct: 20 IVLMVAMVGVIGLLSALG---WYAWRQSIGAEEARLGALAERLGQRAETVLTDARTLLEM 76 Query: 66 LERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISK 125 L A CS+ H+ M+ + + Y++ V QC + P+ KI Sbjct: 77 LNNSTVARCSDKHIRTMQEEAIARPYVRAVGSWRAAERQCGVGFIQGNALKPPKASKIYP 136 Query: 126 DGYRVWLTSHND-LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQ----IDAAIIGNA 180 +G W + LG + + M + + ID +D + +D ++ N+ Sbjct: 137 NGVVAWWPGPDTALGNVELFI-MRLGEHDLAIDTRLVLDQRLSGEQRAGLWVDGLLLANS 195 Query: 181 H-NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGW 239 + V+ +++G L P E+N I+ + ++ S+ + Sbjct: 196 PPDAVLPEPTTLSRG----LNIAP----ESNTIVARFSLDTIFPMDVVAVQSSGHFFSRY 247 Query: 240 HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 + + LGL++ L +FV + +R S L+ AI++ I YQPIV L G+ Sbjct: 248 AKTLAAAGVLGLLLMGLWFLFVKHLSKRHLSLTAELRSAIDHDGIDAVYQPIVDLNTGRC 307 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHIS 359 VGAE LARW ++DG + PD F+ +A+Q G+ +T + R D+G LR+ I+ Sbjct: 308 VGAEILARWERSDGEMIRPDLFVAIAEQQGIIGGITHNVFRRAIGDLGKLLRKQSDLRIN 367 Query: 360 INLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEI 419 +NL L I LL + ++ LE+TER D + + +IS R+ GH+I Sbjct: 368 LNLSPLDLEDNAIADLLETELRKARLPAATFKLEITERGLIDSEEARALISALRQRGHQI 427 Query: 420 YLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVT----PHIIEMAKTLKLKMVAE 475 +DDFGTGYSSLSYL+ ++D LK+DK+FVDA+E + VT PH+IEMA++L+L MVAE Sbjct: 428 AIDDFGTGYSSLSYLESFELDTLKLDKAFVDAIETRAVTSSVIPHVIEMARSLELDMVAE 487 Query: 476 GIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 GIE+ Q +WLR+ GV GQG+LYSK L DF Sbjct: 488 GIESEHQAQWLREQGVQMGQGYLYSKPLSAADF 520 >UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 Tax=cellular organisms RepID=Q1LGY0_RALME Length = 536 Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 159/529 (30%), Positives = 250/529 (47%), Gaps = 47/529 (8%) Query: 14 LILSVLLPVGLSIWLAH------QQVETSFIEELDTYSSRVAIRANKVATQGKDALQELE 67 L L+ +LPV S+W+++ QQ+ T + ++ V R + + Q L Sbjct: 14 LALAFMLPVCASVWMSYRLALSEQQLHTGIL------AAEVLYRVHVFSEQNLRINAALR 67 Query: 68 RWQGAA--CSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISK 125 R GA CS ++ MR ++ Y+Q V Y++ NV QCSS + P I Sbjct: 68 R-HGATSPCSPDNVALMRNLAVGASYLQVVGYVEGNVLQCSSYGYGDGDAGIP----IGP 122 Query: 126 DGYRVWLTSHNDLGIIRYMVAM---GTAHYVVMIDPASFIDVIPYSSWQIDA-------- 174 YR L + +R V + + Y+ + D + + +D Sbjct: 123 PAYRSRLGNW-----VRTSVKLPFDESRRYIALTDSVTGYSSLALPDMLLDTGGGGHGFA 177 Query: 175 -AIIGNAHNVVITSSDEIAQGIITRLQKTPGEHI-ENNGIIYDILPLPEMNISIITWAST 232 A++ ++ ++ D I G + L + G ++ G + P + + + + Sbjct: 178 IALVAISNRQIVVQRDPIDLGGMPPLIRERGTITWQHRGATGSVSLSPSRDYAAVVMSPA 237 Query: 233 KMLQKGWHRQVFIWL-PLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPI 291 L W R V WL P G ++G LRR +L A+ + ++ + Y PI Sbjct: 238 SALHANW-RNVATWLVPFGALLGGALVALARLGLRRRHGLLRQLDRALRDDELSLAYMPI 296 Query: 292 VSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR 351 V L +GK +GAEAL RW DG W++PD FIPLA++ LT ++ + D R Sbjct: 297 VELESGKWIGAEALMRWCH-DGQWIAPDKFIPLAERHHRIRKLTNRMLDLLVADAQALPR 355 Query: 352 QHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIIS 410 + + S+NL + L + I Q + D+ V+ + +E TE + P I Sbjct: 356 DLARAMYFSVNLSAEDLAACAIAQRVADVRQACGVD--GVMVEATEGVLLEASRVIPNIE 413 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAK 466 R R+ G + +DDFGTGYSSLSYL LDVD +KIDKSFV A+ + V HII+MAK Sbjct: 414 RLRKLGIRVAIDDFGTGYSSLSYLGSLDVDYIKIDKSFVSAIGTNSVRGHVVAHIIDMAK 473 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + + ++AEG+ET +Q ++L GV Y QGWL+ KA+P +DF+ H Sbjct: 474 DVGVAVIAEGVETQEQADYLMARGVRYAQGWLFGKAMPMQDFVSAIRMH 522 >UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae RepID=B2I7U8_XYLF2 Length = 530 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 152/523 (29%), Positives = 268/523 (51%), Gaps = 24/523 (4%) Query: 2 RTRHLVGLISGVLILSVLLPVGLS-----IWLAHQQVETSFIEELDTYSSRVAIRANKVA 56 R + LI G + L V ++ +W+ Q+ E + +L + ++ R ++ Sbjct: 8 RLKRCWTLIVGATLCIACLSVSIALTDGYVWVTTQRHEQQRLRDL---AQQMGQRVDRAV 64 Query: 57 TQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPD- 115 ++ L +++ A CS H+ MR + + RYI E+ Y C+S P D Sbjct: 65 SESLLLLSDMDHAHLAPCSPEHIARMRALVLATRYITELDYAPTQKLSCTSW---GPFDG 121 Query: 116 TFPEP--GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDV-IPYSSWQI 172 F + DG + L + ++ + Y ++ ++F+D IP + Sbjct: 122 AFKQTLTSDTRNDGLELVKRVSLPLNPEQRLLGLHHGDYHALMKLSTFMDFPIPPG---V 178 Query: 173 DAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWAST 232 + A+ +++++ + + + ++ + ++ ++ + P + I Sbjct: 179 ELALATMDGVLLLSTGSHVKELFSNPVNQSASD--PSHDVVAARIQNPHHDWQIAVIEPI 236 Query: 233 KMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 + L HR+ ++ +P+ L++ L + + LRR ++P RL+ AI+ + V YQPIV Sbjct: 237 QQLVGAVHRKEWLAIPVALLVSLSVSGLAILYLRRRRAPLARLRQAIQRCEFFVCYQPIV 296 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 SL++G+ VGAEAL RW Q DG+ + PD FIPLA+++GL P+T +I + ++G L Sbjct: 297 SLSDGRCVGAEALVRWRQQDGTLILPDQFIPLAERSGLILPITDQVIAASMRELGPLLVA 356 Query: 353 HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRY 412 HI+IN+ + S ++ +L + + +Q+ +E TER F D + + I R Sbjct: 357 DRSLHIAINVSVKDIESGRLLDVLALALQDTGLYRKQLWIEATERSFMDARAAREHIVRL 416 Query: 413 REAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL--EYKN--VTPHIIEMAKTL 468 REAG+ + +DDFGTGYS+L YLQ L +D LKIDKSF+D + + N V HII++AK L Sbjct: 417 REAGYAVVIDDFGTGYSNLQYLQQLPLDALKIDKSFIDTVGRDVTNTAVASHIIDIAKEL 476 Query: 469 KLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 ++ +AEG+E +Q +LR GV QGWL+S L +F+ + Sbjct: 477 GMRTIAEGVEREEQLVYLRARGVDMAQGWLFSSPLSVAEFVDY 519 >UniRef50_Q1H3Q9 Putative signaling membrane protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Q9_METFK Length = 516 Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 146/488 (29%), Positives = 237/488 (48%), Gaps = 36/488 (7%) Query: 39 EELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYI 98 ++L +YS+ + RA VA + + L + A CSE L MR V + R +++V + Sbjct: 44 QDLQSYSNDLFARAVAVAAETEKILDS-DWGTEAPCSEDDLDRMRYVIFYSRMLRDVGRL 102 Query: 99 DNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVA-MGTAHYVVMID 157 + N CS+ P + P S +G +R+ + AH V+ D Sbjct: 103 EVNRLLCSAGWGALPDELQALP------------PSQYHIGAVRFWSKIINPAHPQVISD 150 Query: 158 PAS----FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQ--GIITRLQKTPGEHIENNG 211 A+ F+ P + + + G VV + + + G + P E + G Sbjct: 151 IAAKGDIFVATSPAAFDRFSSPPSGIGAKVVTSDGQYVFEKFGEADAINYVPAEQWRDQG 210 Query: 212 IIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPL---GLVIGLLAAMFVLRILRRI 268 + E + S K + R++ + + L G + GL A + + LR Sbjct: 211 STLRFVRCDEKYALCVV--SQKTDGGLFSREIVLPVVLALAGTLFGLFAGLVGVIQLRHQ 268 Query: 269 QSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQT 328 QS RL+ + + + +HYQP+ L++GK+VGAEALARWP +GS +SPD FIPLA++ Sbjct: 269 QSLPVRLRKMLREKSLVLHYQPLRVLSSGKLVGAEALARWPLHNGSSVSPDKFIPLAEEL 328 Query: 329 GLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 GL LT L++ +MG LR+ P +ISIN+ + L ++L + H+ V+P Sbjct: 329 GLMSELTRLVVEKALAEMGARLREDPGFYISINITAADLLDHDFGKVLDASVKHHGVSPA 388 Query: 389 QIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 Q+ LE+TER +D + + G Y+DDFGTGYS+L L L +D +K+DK F Sbjct: 389 QVVLEITERTTSDYSQLDGAMRSLSQKGFRFYMDDFGTGYSNLGSLAQLPLDAIKVDKVF 448 Query: 449 VDALEYKNVTPHII----EMAKTLKLKMVAEGIETSKQE----EWLRQHGVHYGQGWLYS 500 V A+ + + ++A+ L++ +VAEGIET++Q +W+ GQGWL Sbjct: 449 VKAIGTDSPVAEMFGPISKIAQDLRVNIVAEGIETAEQSSGVLQWVPD---AIGQGWLLG 505 Query: 501 KALPKEDF 508 + +P F Sbjct: 506 RPVPAAMF 513 >UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella RepID=Q7W9Y7_BORPA Length = 524 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/279 (36%), Positives = 157/279 (56%), Gaps = 4/279 (1%) Query: 240 HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 R + +PL GL + + + RR S ++ + + + YQP+V + G+ Sbjct: 242 QRLAILLVPLSAAAGLGLLVGAVILARRQFSLPQLIRSGLRRNEFYMVYQPMVEVGTGRC 301 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHIS 359 VGAEAL RW + +G ++PD FI A++ GL +T + V D+ W + +IS Sbjct: 302 VGAEALIRWRRRNGDLIAPDVFIDEAERVGLIGKITERVFELVSSDVQRWRGRLGDLYIS 361 Query: 360 INLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEI 419 IN+ + + S +LL +M + P Q+ +ELTER + I R+ G + Sbjct: 362 INVSAADMASGAAERLLSEMFARTGLTPSQVVVELTERALLHSDEAVAAIKIIRKMGGRV 421 Query: 420 YLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY----KNVTPHIIEMAKTLKLKMVAE 475 +DDFGTGYSSL+YL +VD LKIDK FVDA+ +V+ HIIEMAK+L L++VAE Sbjct: 422 AIDDFGTGYSSLAYLTSFEVDGLKIDKRFVDAIGRDAPSSSVSVHIIEMAKSLGLRVVAE 481 Query: 476 GIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 G+ET+ Q+ +L +HGV Y QGWL+ + +P + L A + Sbjct: 482 GVETAGQQRFLSEHGVDYAQGWLFGRPMPLNELLAMARR 520 >UniRef50_C6DIW9 EAL domain protein n=6 Tax=Pectobacterium RepID=C6DIW9_PECCP Length = 529 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 144/485 (29%), Positives = 238/485 (49%), Gaps = 28/485 (5%) Query: 40 ELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYID 99 +L YS V + VA +G++ + + A CS A L E+R +S+ Y++++ I Sbjct: 43 QLQHYSQDVLDQGIAVANEGRETINRVLTLNNAPCSSADLKELRLISFYSVYLRDIGRIK 102 Query: 100 NNVPQCSS-LEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDP 158 +N CS+ +PP P + +G ++W T+ D+ R M + + VV I Sbjct: 103 DNYLICSAGWGILNPPIYLLPPNLTTPEGVQLW-TAMKDVVDPRITADMASLNGVVTITA 161 Query: 159 ASFIDVIPYSSWQIDAAIIG-NAHNVVITSSD-EIAQGIITRLQKTPGEHIENNGIIY-- 214 A+ + + +A +I N ++ T D +++ T+ QK + + Sbjct: 162 AAAFRRFIHPPAEYNAMLITRNLGHIYQTFGDIDLSAFKQTQQQKNAWLTMGKRQTFFCA 221 Query: 215 ---DILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRIL---RRI 268 DI L +++ S +L + W +I L V L+ A F L R Sbjct: 222 ANRDICVLAQLD-------SAGILYRPW----YIITALFFVGALIGASFTLSYQLYDDRH 270 Query: 269 QSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQT 328 Q+ +L+ AI+++ + VHYQP++SL I+G EALARW G +SP+ FI +A++ Sbjct: 271 QALPSQLKRAIKHQRLHVHYQPLISLPQRAIIGVEALARWKNERGDNVSPELFIGIAEKM 330 Query: 329 GLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 G S LT +I R DM +L Q +SINL + S L+ + + ++ Sbjct: 331 GYSAELTRIITRQALRDMQPYLTQESPFLLSINLSVSDIVSSDYHHFLQQLCDELGIDRT 390 Query: 389 QIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 ++ LELTER KT A + R +G+++ LDDFGTGYS+L YL L D++KIDK F Sbjct: 391 RVMLELTERSSTSHKTLADGLEALRRSGYKVALDDFGTGYSNLDYLSHLPFDMIKIDKIF 450 Query: 449 VDALEYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHG-VHYGQGWLYSKAL 503 V A+ +V + + + K L + ++ EG+ET +Q ++ QH QGW +S+A+ Sbjct: 451 VGAIGTDSVNAAMADLLFTLVKKLDVPVIIEGVETREQAAYILQHCPSAIIQGWYFSRAV 510 Query: 504 PKEDF 508 D Sbjct: 511 ALHDL 515 >UniRef50_C4SZL5 Predicted signal transduction protein containing sensor and EAL domains n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZL5_YERIN Length = 512 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/263 (37%), Positives = 149/263 (56%), Gaps = 4/263 (1%) Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + L++ L + F R S ++ A++ + C+HYQPIV + G+I EAL RW Sbjct: 234 INLLLLLSYSTFFYCYARHKLSMKKAIRRALQKGNFCLHYQPIVEIKTGQIQSLEALIRW 293 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLT 368 P T G+ + D FIP+A+QTGL +T ++ V D+ + HP+ I++N+ + L+ Sbjct: 294 PTTSGNAIPADVFIPVAEQTGLICSITQYVLHQVMIDLSVLHQTHPKLMIAVNISAADLS 353 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGY 428 + LR Y ++P + LE+TER D + + + E G + LDDFGTGY Sbjct: 354 AADFATALRTQCAAYALSPHYLKLEITERSLVDDENAKRNMLSLSEEGFMLVLDDFGTGY 413 Query: 429 SSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLSYL L V LKID+SF+ L +V P I+ MA+ L ++++AEG+ET++Q + Sbjct: 414 SSLSYLNKLPVQTLKIDRSFILGLGMNIATGSVVPQIVSMAQQLNMQVIAEGVETAEQAQ 473 Query: 485 WLRQHGVHYGQGWLYSKALPKED 507 L V Y QGWLY KA+P D Sbjct: 474 ALLDLDVPYAQGWLYDKAMPLAD 496 >UniRef50_Q0C635 Putative diguanylate cyclase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C635_HYPNA Length = 594 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 150/259 (57%), Gaps = 8/259 (3%) Query: 259 MFVLRILRRIQSPHH---RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 F R+ R +Q + L+DA+ENR+ +QP + A G+IVGAEALARW +++G Sbjct: 310 FFTPRLTRIVQGRYRFEAELRDAVENREFKAVFQPKIDFATGRIVGAEALARWRRSNGKL 369 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQL 375 +SP +FIP+A++ GL E + I+ + E W + +++N+ + + Sbjct: 370 ISPAAFIPVAEEAGLIEEIGKQILEAACEAARTWELEGHDVTVAVNVSPSQFQRNDLTET 429 Query: 376 LRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + + ++PR + LE+TE +DP A IS R G ++ +DDFGTG+S+L+ L Sbjct: 430 VMGALRRSGLHPRLLELEITESMAVSDPARVAEFISPLRAMGTKLAIDDFGTGHSNLATL 489 Query: 435 QDLDVDILKIDKSFVDALEYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHG 490 L D+ KID+ FV ALE P I+E MA+TL LK VAEG+ET+KQ ++LR+ G Sbjct: 490 TQLPFDVFKIDRQFVSALETDRQAPAIVEMILAMAETLGLKTVAEGVETTKQADFLRRRG 549 Query: 491 VHYGQGWLYSKALPKEDFL 509 QG+LYS LP + FL Sbjct: 550 CTMAQGFLYSPGLPDQAFL 568 >UniRef50_B2S9Y1 EAL domain protein n=38 Tax=Brucella RepID=B2S9Y1_BRUA1 Length = 544 Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 143/507 (28%), Positives = 235/507 (46%), Gaps = 35/507 (6%) Query: 19 LLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAH 78 L+ GL I + ++ ++ L YSSR+ A ++ E+ CS Sbjct: 29 LVGKGLRILEEERHMDI-YMTALRDYSSRLLASARNTLEAANNSPFEI-------CSPQD 80 Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSL--EHESPP------DTFPEPGKISKDGYRV 130 L R++ ++ +I+++ + ++ CS+L + ++ P D + I D + Sbjct: 81 LAYQRKLVFAAYHIKDIGRLRDDQLICSTLLSDIKTQPRRSVANDNLKDGTYIYADDALI 140 Query: 131 WLTSHNDL-GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAII----GNAHNVVI 185 SH + G V + + + ++ P + + A++ GNA Sbjct: 141 TPGSHGPIIGRGNANVVLSSVAFDLLHTPRYAFSIFATDEEKKHFALLYNYSGNAEPGPE 200 Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFI 245 SS + AQ + + G+ + N P+ + I A+ + + Sbjct: 201 PSSGDWAQKFV---EAPDGKVLRENSCD------PDTGVCISLSATIDRTSTAARLKNLL 251 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 + LG + G + L R S +RL A+ + + YQP+V +A+GK++G EAL Sbjct: 252 AICLGALAGGSVGLGWLYYRNRDHSLLYRLNKALAAGEPHLLYQPVVDMADGKVLGFEAL 311 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESP 365 RW G ++ PD F+ A++ G + +T+ ++ + EDMGD LRQ I+IN+ + Sbjct: 312 IRWEIRKGDFVPPDVFVARAEEAGTATKITIYVLERLIEDMGDTLRQRRDLRININITAS 371 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFG 425 L S + + + P+Q+ LELTER D + I R RE GH IY+DDFG Sbjct: 372 DLQSPAFMSRMERRLAAADIEPQQVGLELTERTAVDFSKATDGIRRLREQGHRIYIDDFG 431 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDAL--EYKNVT--PHIIEMAKTLKLKMVAEGIETSK 481 TGYSSL+YL +L VD +KIDK+F + +Y V+ P II MAK L +V EG+ET Sbjct: 432 TGYSSLAYLGELHVDAIKIDKAFTRTVGNDYATVSIIPQIISMAKEHGLDIVVEGVETEA 491 Query: 482 QEEWLRQHGVHY-GQGWLYSKALPKED 507 Q + R+ G QGW + K L D Sbjct: 492 QALYFRKLGTPLAAQGWFFGKPLCVSD 518 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 163/294 (55%), Gaps = 7/294 (2%) Query: 227 ITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICV 286 I+ T+ LQ W + + ++P+ +++ +L LRR S L+ + + V Sbjct: 224 ISAPRTETLQN-WRQVLLTFMPMAVILSVLFVAVTNSWLRRRSSYRDELRRGMAFGEFSV 282 Query: 287 HYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDM 346 HYQP+ +L NG++ G EAL RW ++DGSW+ PD FI A+ G+ LT +++ + +D Sbjct: 283 HYQPVCNLVNGQLAGVEALMRWQRSDGSWVRPDIFIAAAEAEGMIVQLTRHLLQLIAKDC 342 Query: 347 GDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF-ADPKTS 405 W + HI IN+ + L E + +R + I LELTER ++ Sbjct: 343 ASW-KVPAGFHIGINVAADHLQHEDFVKDIRGFSQNIAHLLPTITLELTERSLISEGDLV 401 Query: 406 APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHI 461 A ++ R G + +DDFGTG+ SL+YLQ +D LKIDKSFV+A+E + + I Sbjct: 402 AHRLAELRSEGIRVAIDDFGTGHCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTI 461 Query: 462 IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 I++A L L++VAEGIET Q E+L+ HGV + QG+ Y++ L + W EQ+ Sbjct: 462 IQLAHRLALQVVAEGIETPLQMEYLKNHGVVFIQGFYYARPLSSAALMVWIEQN 515 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 30/282 (10%) Query: 237 KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLAN 296 K R F + G+ + A M + + LRR A+ + + YQPIV + Sbjct: 785 KDAGRNNFKYFTSGMNQAMFARMELEQRLRR----------AVAQDEFTLFYQPIVDMKT 834 Query: 297 GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ 356 G+I EAL RW D + PD FI +A++TGL EP+ ++ D+ W Q Sbjct: 835 GQICSVEALIRWQDPDLGLIPPDQFIAIAEETGLIEPMGEWVLNQAMHDLRQW------Q 888 Query: 357 HISINLESPVLTSEK---------IPQLLRDMINHYQVNPRQIALELTEREF-ADPKTSA 406 H+ +NL + S + Q+L++ N + +NPR + +E+TE D Sbjct: 889 HMGLNLNVAINVSSRQCINTRGIGFDQVLQECFNRHHINPRNVHIEITESMLMGDASHCL 948 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD-ALE---YKNVTPHII 462 + R G +IY+DDFGTGYSSLSYL+ + ++KID+SFV+ ALE N+ I+ Sbjct: 949 STLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVIKIDRSFVEHALENCSNANLVKAIV 1008 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 M ++L++++VAEGIET Q ++LR G HY QG+L SK LP Sbjct: 1009 MMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYLLSKPLP 1050 >UniRef50_C0QHY0 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHY0_DESAH Length = 559 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 93/252 (36%), Positives = 144/252 (57%), Gaps = 10/252 (3%) Query: 270 SPHH-----RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 +PHH L+ AIEN ++ +H+QP +++ I G EAL RW + +L PD FIP+ Sbjct: 304 NPHHLTMVGELRQAIENDELVLHFQPKINIQTRSISGVEALVRWQHPEHGFLPPDDFIPM 363 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 A++TGL +PL++ ++ W +Q+ + I+INL ++P L+ M++ Y Sbjct: 364 AERTGLIKPLSIWVLNHALSQGEKWHQQNFKLSIAINLSPATFLDPELPNLIIGMLSLYD 423 Query: 385 VNPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 + P + LE+TE +P + I+ R G +I +DDFGTGYSSL YL+ + +K Sbjct: 424 IPPNFVTLEITEGSMIKNPDLAMEILERLTSKGIKISIDDFGTGYSSLVYLKKMPASEVK 483 Query: 444 IDKSFV-DALEYKN---VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 IDKSFV D L+ N + II++ L LK+VAEG+E + +L+ G QG+ + Sbjct: 484 IDKSFVTDMLKNDNDAVIVKSIIDLGHNLGLKVVAEGVEDKQTANYLKTLGCDLLQGYYF 543 Query: 500 SKALPKEDFLRW 511 SK L +DFL W Sbjct: 544 SKPLSSDDFLNW 555 >UniRef50_B8CUT1 EAL domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUT1_SHEPW Length = 515 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 24/290 (8%) Query: 234 MLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQ-SPHHRLQDAIENRDICVHYQPIV 292 M++ G V LP+ L++ L A ++ ++L+R + S RL+ AI R++ YQPI+ Sbjct: 232 MMKNG----VVFSLPVSLLVAFLCA-YLFKLLKRSERSLKQRLKRAIRQRELIAFYQPIM 286 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 A G+IVGAEAL RW + +G +SP FI ++T L PLT+ ++ + ED+ Sbjct: 287 DAATGRIVGAEALVRWLRPNGEVISPARFIDELERTALINPLTIQMLEQIPEDLKSIFAS 346 Query: 353 HPQQHISINLESPVLTSEKIPQLLRDMINHYQV------NPRQIALELTER-EFADPKTS 405 S+N L E++ Q D H ++ +QIA+E+TER + + + Sbjct: 347 DGGFRCSLN-----LVPEQVEQ--EDFCRHVELLAASGFPTQQIAVEITERLPLRNLEVA 399 Query: 406 APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHI 461 + R + G I LDD GTGY SYLQ+L++DILKIDK FVD L + V Sbjct: 400 NQHLERLKALGVMIELDDAGTGYGGASYLQELNIDILKIDKLFVDTLVLSPDNTPVLDAY 459 Query: 462 IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 I+MAKTL+++++AEG+E KQ L GVH QG+ +SK LP E+F+R+ Sbjct: 460 IQMAKTLEMEVIAEGVEKQKQSLALLARGVHLHQGYYFSKPLPAEEFVRF 509 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 141/240 (58%), Gaps = 8/240 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE ++ HYQPI SL GK++G EAL RW + +SP FIP+A++TGL P+ Sbjct: 453 LRQAIEQQEFIAHYQPIFSLTTGKLIGFEALIRWQHSQKGLISPAEFIPIAEETGLIVPM 512 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 I+ + W Q+ +H IS+NL S L + Q + ++ H ++NP+ + Sbjct: 513 GKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLRDPYLVQEIDKILTHTEINPQNLK 572 Query: 392 LELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 +E+TE + T+ I+ + +E ++ LDDFGTGYSSLSYL VDILKID+SFV Sbjct: 573 IEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTGYSSLSYLHRFPVDILKIDRSFVM 632 Query: 451 ALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + N + II +A +L ++++AEGIET Q L+ GQG+L+SK +P+E Sbjct: 633 QMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQLSQLKSLNCEQGQGYLFSKPVPQE 692 >UniRef50_A6V5X2 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=7 Tax=Pseudomonas aeruginosa RepID=A6V5X2_PSEA7 Length = 533 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 148/530 (27%), Positives = 248/530 (46%), Gaps = 50/530 (9%) Query: 3 TRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDA 62 T LVG + G+ +++ L +Q + + L +Y+ RA ++++ Sbjct: 23 TTTLVGGVCGIFVINEL----------DRQHDGA---HLASYTEMALERALEISSAADQM 69 Query: 63 LQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHE-SPPDTFPEPG 121 L E+ ACS+ L +R + R++ +V I N C+ + P P Sbjct: 70 LAEMNAGSAPACSDRDLEMLRSIVLESRFMSDVGRISGNQVICTGVRGRLRAPWGLSAPD 129 Query: 122 KISKDGYRVWLTSHN-DLGII-RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN 179 ++ + G R W L ++ +VA G A +V I P ++ DV + AA+ N Sbjct: 130 RVDRAGTRFWSEGMPLPLQVLPTGLVARGNA--IVFIAPHAYFDVDHPDAGISAAAVSAN 187 Query: 180 AHNVVITSSDEIAQGIITRLQKTPGEHI--ENNGIIYDILPLPEMNISIITWASTKML-- 235 + + E + PG E +G P+ ++ +++ + L Sbjct: 188 GDYIYHRFAGEQRPA-----PEMPGRPAWPEVSGARQASRCEPDQDLCVVSHLRERGLLN 242 Query: 236 ----QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPI 291 + + L G+++ LL+ +F ++ + RL A++ + VHYQPI Sbjct: 243 TEPDRAAMAAAMGGGLFFGVML-LLSYLFGFLSDEKLPA---RLLRALKREALEVHYQPI 298 Query: 292 VSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR 351 V LA+G+ +G EALARW + +SPD FI +++G + LT + R +G LR Sbjct: 299 VRLADGRCIGVEALARWTDSSLGRVSPDIFIGALEESGDIQLLTRFVFRRALRQLGPLLR 358 Query: 352 QHPQQHISIN-----LESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSA 406 + P ++SIN + +P I Q+ R+ +V P Q+ALELTER Sbjct: 359 KEPGFYVSINVTGKDIANPGFIDFAIRQMARE-----RVLPAQVALELTERTTEAQVCLL 413 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIE--- 463 ++R RE G +IY+DDFGTG+S+L YL +L VD +KIDK F ++ I + Sbjct: 414 AGMNRLRELGLKIYVDDFGTGHSNLVYLANLPVDAIKIDKVFTQSIGESEAVELIFDKLC 473 Query: 464 -MAKTLKLKMVAEGIETSKQEEWL-RQHGVHYGQGWLYSKALPKEDFLRW 511 MA+ L++ +V EGIET Q +++ R+ GQGW + +AL E FL + Sbjct: 474 SMAEQLQIGVVVEGIETQAQADYVSRRSPEALGQGWHFGRALALEAFLAY 523 >UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1L5_DESAC Length = 1018 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 96/251 (38%), Positives = 149/251 (59%), Gaps = 7/251 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 R++ R+ S L++A++N + ++YQP ++L +G +VGAEAL RW DG + PD FI Sbjct: 743 RVIERM-SLAEMLREAVDNGEFELYYQPKINLKDGMVVGAEALLRWHSRDG-MVPPDRFI 800 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINH 382 P+A+QTGL P+ ++ E W +++P+ H+ +NL + +P+L+ D++ Sbjct: 801 PIAEQTGLILPIGEWVLLQACEQAHIWRQEYPEFHMGVNLSPAQFDLDYLPRLVADILKE 860 Query: 383 YQVNPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDI 441 Q+ + LE+TE D + I+ R+ G EI +DDFGTGYSSLSYL L +DI Sbjct: 861 AQLPAEALELEITEGMIIEDIDNTVQILRSLRDLGVEISIDDFGTGYSSLSYLTRLPLDI 920 Query: 442 LKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGW 497 LKID+SF+ D+ + NV I+ +A++L LK+ AEG+ET L H Y QG+ Sbjct: 921 LKIDRSFMFEVPDSRDSTNVVLSILALARSLNLKVTAEGVETEDHVTLLHDHRCTYIQGY 980 Query: 498 LYSKALPKEDF 508 S+ LP +F Sbjct: 981 FCSRPLPVAEF 991 >UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=39 Tax=Enterobacteriaceae RepID=B4T8H8_SALHS Length = 516 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 154/282 (54%), Gaps = 8/282 (2%) Query: 235 LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSL 294 L W + +FI++PL L + + +F R + S + I + + VHYQP+ ++ Sbjct: 213 LSAYWLQNLFIFIPLSLCLSVGMMLFYRRWYLKRLSLAREIARGITHNEFTVHYQPVFNV 272 Query: 295 ANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP 354 +G G EAL RWPQ DG +++PD FI A+ G+ PL+ + + D+ +W Sbjct: 273 EDGSCGGVEALMRWPQPDGRFITPDIFITAAENEGMIIPLSRHLFELIAHDVINW-TVSD 331 Query: 355 QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF-ADPKTSAPIISRYR 413 +IS+N+ L + Q + + ++ + LELTER +P A +S R Sbjct: 332 DFYISVNISPAHLMDDGFIQDIEAL--RTRLGTITLMLELTERSLIVEPSQVAEKLSTLR 389 Query: 414 EAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLK 469 E G I +DDFGTGY SLSYLQ L VD LKID++F+D ++ + V II +++ L Sbjct: 390 EKGVLIAIDDFGTGYCSLSYLQQLPVDSLKIDRTFIDTIDTSSDDVPVLDTIITLSQRLG 449 Query: 470 LKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 L +VAEG+ T Q ++ HGV + QG+LY++ + DF+ W Sbjct: 450 LNVVAEGVSTQHQLRYILSHGVGFVQGFLYARPMGANDFMSW 491 >UniRef50_UPI0001850699 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850699 Length = 676 Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 140/240 (58%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 ++ AI++ D ++YQP S NG+++G EAL RW +SP FIPLA++TGL PL Sbjct: 424 IRSAIKHEDFLIYYQPKFSTINGRMIGVEALVRWKHRHKGIISPGHFIPLAEETGLIIPL 483 Query: 335 TLLIIRSVFEDMGDW-LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R V + +W R H +S+N+ S + Q +RD++ VNPRQI LE Sbjct: 484 GAHVLRKVCLKLKEWESRGHKDIIVSVNVSSRQFHDDHFLQTVRDILIETGVNPRQIELE 543 Query: 394 LTEREFADPKTSAP-IISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE + A I+ E G I +DDFG YSSL+YL+ VD LK+DKSF+ L Sbjct: 544 ITESTAMEQVYRAERILKELSELGITITIDDFGIEYSSLNYLKKFAVDTLKVDKSFIREL 603 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + II MA L+L +VAEG+ET +Q +WL+ +G Y QG+ +S+ +P E+F Sbjct: 604 LTNESNQAIVRAIIVMATHLQLDLVAEGVETEEQLKWLQMNGCQYVQGYYFSRPIPCEEF 663 >UniRef50_D1RIS6 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RIS6_LEGLO Length = 530 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 108/326 (33%), Positives = 173/326 (53%), Gaps = 18/326 (5%) Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNIS---------IITWASTK--MLQKGWHRQV 243 IIT QK ++N + L P++ +S IIT + +++ W +++ Sbjct: 192 IITMEQKEKFPWLDNKLLQIKSLLFPKLVVSTRLNSISGIIITVVENRRNIIRSFWFKEI 251 Query: 244 FIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAE 303 + L + LV+ +L + +IL + S H ++ AI+ YQP+ N GAE Sbjct: 252 LLALDI-LVLSILLYFLLKQILNKYYSLHGAIKKAIKKEQFYPVYQPLFDARNNVYSGAE 310 Query: 304 ALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLE 363 L RW + + PD FI A+ TGL P+TL I+ + F++ + L P H++ NL Sbjct: 311 VLLRWKYYQDTIIMPDLFIQEAEDTGLIIPITLQIVETAFKETKELLYGSPSFHLAFNLC 370 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPI--ISRYREAGHEIYL 421 + T +++ Y ++P QI LE+TER D + I + REAG+ + + Sbjct: 371 AYHFTDTLFFDQFHKLVDQYSISPNQILLEITERYLLDVNDKSFIKKMLALREAGYSLAI 430 Query: 422 DDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPH----IIEMAKTLKLKMVAEGI 477 DD+GTG+SS+SYLQ + LKIDK F+ A+ K +T II +AK + L ++AEG+ Sbjct: 431 DDYGTGHSSISYLQYYPFNFLKIDKIFIQAIGSKAITETLNDAIINLAKKINLTIIAEGV 490 Query: 478 ETSKQEEWLRQHGVHYGQGWLYSKAL 503 ET +Q +L ++ VH+ QGW +SKAL Sbjct: 491 ETKEQVNYLLENDVHFLQGWHFSKAL 516 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 171/303 (56%), Gaps = 11/303 (3%) Query: 214 YDILPLPEMNISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPH 272 + I+P + SI+ + K L W+++ +L + +I L + + RI SP+ Sbjct: 192 FVIIPSGHYHFSILYSLNEKYSLADFWYKEKMTFL-IVFLIALGSGFLAYKYSTRINSPY 250 Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 ++ AIEN+++ +YQP++S + +I G E LARW ++SPD FIPL +Q+GL Sbjct: 251 DGIRRAIENQEVLPYYQPVISTVSREIYGVEVLARWHHPKSGFISPDIFIPLCEQSGLII 310 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 P+T ++ SV D+ L P HI+IN+ + S+ ++ I + + Sbjct: 311 PMTRSLMSSVVRDLTPHLNTLPDNLHIAINISAQHCQSDDFITDCQNFIAAFGDKNVHLM 370 Query: 392 LELTEREFAD--PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 +E+TERE D P+T + +AG I LDDFGTGYS+ YL+ L V+++KID+SFV Sbjct: 371 IEITEREKVDITPETIG-FFKKLSDAGVLIALDDFGTGYSNFDYLRKLHVNVIKIDQSFV 429 Query: 450 DALEYKN-----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 ++ + + +I++A+ +KL +AEG+ET Q E+L + +++ QG+ +S+ LP Sbjct: 430 SMIDENDPQSSTLVNCVIDLAQQMKLMTIAEGVETEFQTEFLSRKHINFMQGYFFSRPLP 489 Query: 505 KED 507 ++ Sbjct: 490 FDE 492 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 136/240 (56%), Gaps = 5/240 (2%) Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 +L+ AIE ++ VHYQP+V G++VGAEAL RW +SP+ FIPLA++TGL Sbjct: 669 QLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILS 728 Query: 334 LTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 + ++R+ D W R + +++N+ + +++R +N + P + LE Sbjct: 729 IGAWVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELE 788 Query: 394 LTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE + + + II G +DDFGTG+SS+SYL+ D LKID+SF+ L Sbjct: 789 LTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDL 848 Query: 453 EYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 ++ II MA ++ LK+V EG+ET Q E+LR G H QGWLYS+ +P +DF Sbjct: 849 GDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDF 908 >UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0KNV8_AERHH Length = 510 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/277 (36%), Positives = 152/277 (54%), Gaps = 11/277 (3%) Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 + R I PL +GLLA V + R SP L+ A++ R+ + QP+V+ + Sbjct: 231 YSRASLIIYPL---LGLLAGCLVYWLAGRSTSPSQELRRALDQREFIPYLQPVVTGDDAH 287 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-H 357 G E L RW +SPD FIPLA+ +GL P+T L++ V E + P+ H Sbjct: 288 WSGCEVLMRWQHPRQGLISPDRFIPLAEDSGLIVPMTRLLMEQVREQFAGRVHSLPRGFH 347 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF--ADPKTSAPIISRYREA 415 N+ + + + RD IN ++ NP ++ LELTERE AD +T+ + + + Sbjct: 348 FGFNISASHCKDMSLLEDCRDFINAFRENPIKLVLELTERELIVAD-ETTDRLFAELHQL 406 Query: 416 GHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIE----MAKTLKLK 471 G I +DDFGTG+SSL+YLQ VD LKID+SFV + ++ HI+E +A L L Sbjct: 407 GVFIAIDDFGTGHSSLTYLQQFQVDFLKIDQSFVGMIGSDALSSHIVENVIDLATRLGLL 466 Query: 472 MVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 +VAEG+E Q +LR V++ QG+LY + +P ++F Sbjct: 467 LVAEGVENEVQAAYLRARQVNFLQGYLYGRPMPMKEF 503 >UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J4K1_COMTE Length = 822 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/251 (39%), Positives = 144/251 (57%), Gaps = 7/251 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 R + H R+ A+ D VHYQP + LA+ ++VGAEAL RW + DGS +SP FIPLA Sbjct: 567 RHMLERHMRV--AVAEGDFEVHYQPKIDLASQQVVGAEALVRWRRQDGSLISPAQFIPLA 624 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQV 385 ++TGL PL ++ ++ W Q HI++N+ + L ++ ++I + Sbjct: 625 EETGLIVPLGRSVLLKACQEGRRWHEQGYLIHIAVNVSAVQLAKSNFTAMVSEIIEQTGI 684 Query: 386 NPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 P + LE+TE A D K + II+ + G I +DDFGTGYSSLSYL+ +D+LKI Sbjct: 685 MPGYLELEITEGVLAKDVKNTFAIINELHKIGVSISIDDFGTGYSSLSYLKQFPIDVLKI 744 Query: 445 DKSFV-DALEYKN---VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SF + L K+ + II MA L L++VAEG+ET Q E L+Q G QG+LYS Sbjct: 745 DQSFTREILTEKSSAAIVAAIINMAHGLDLRLVAEGVETQAQAELLQQMGCTVMQGYLYS 804 Query: 501 KALPKEDFLRW 511 + L E + Sbjct: 805 RPLMPERLTEY 815 >UniRef50_B9ZLS8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLS8_9GAMM Length = 1301 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 142/256 (55%), Gaps = 11/256 (4%) Query: 272 HHRLQDAI--ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 +RL+ A+ EN ++ VH+QP V L +G+ G EAL RW G + PD FIP+A++TG Sbjct: 1042 ENRLRHALNQENDELAVHFQPQVRLVDGRFTGVEALVRWRTGSGESIRPDRFIPIAEETG 1101 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 L PL ++R + L Q P +S+NL L + + +R ++ R Sbjct: 1102 LVVPLGEWVLREACRQGRELLDQVSPDLVMSVNLSPVQLRRGNLVEQVRAILGETGFPAR 1161 Query: 389 QIALELTEREFADPKTSAPI-ISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 Q+ E+TE A + + G + +DDFGTGYSSL+ LQ +D+LKID+S Sbjct: 1162 QLEFEITETGLMQQGDQAVTRLKALKSLGVRVAIDDFGTGYSSLAVLQTFPLDVLKIDRS 1221 Query: 448 FVDALEYKN-------VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 FVD ++ + + II MA+ L+L+++AEG+E Q +L +HG +GQG+LYS Sbjct: 1222 FVDGVDRMDEEGTDRLIASTIIAMARNLQLEVIAEGVENEAQARFLIEHGCEFGQGYLYS 1281 Query: 501 KALPKEDFLRWAEQHL 516 ALP E L WA + + Sbjct: 1282 PALPPEQLLEWAARRV 1297 >UniRef50_C6WN82 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Pseudonocardineae RepID=C6WN82_ACTMD Length = 871 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/253 (36%), Positives = 141/253 (55%), Gaps = 6/253 (2%) Query: 264 ILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIP 323 LRR Q + A+EN I VHYQP ++L + +++GAE+L RW + + PD FIP Sbjct: 599 FLRRFQLVTQ-FRSALENGQISVHYQPKIALPSRQVIGAESLVRWKHPEFGRVDPDEFIP 657 Query: 324 LAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHY 383 + TGL + LT ++ E + W+ + + I++NL L E+ P +++ ++ + Sbjct: 658 AVEATGLVDVLTDFVMDKGLERVRRWMDRDLRMSIAVNLSVRTLADEEFPDRVKEALDRH 717 Query: 384 QVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 +V P + ELTE ADP+ + P++ R G + +DDFGTGYSSL+YL+ L VD + Sbjct: 718 RVPPELLTFELTESGVMADPERALPVLRRLHTMGVVLAVDDFGTGYSSLAYLRQLPVDEV 777 Query: 443 KIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KIDKSFV + V I+E+ +L L +VAEG+E + L G QG+L Sbjct: 778 KIDKSFVLGMGTDLGDMAVVRSIVELGHSLGLTVVAEGVEDDAARDQLVGMGCDVAQGYL 837 Query: 499 YSKALPKEDFLRW 511 S+ L +E F W Sbjct: 838 ISRPLSEERFEAW 850 >UniRef50_B8G486 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Chloroflexus RepID=B8G486_CHLAD Length = 699 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/243 (37%), Positives = 142/243 (58%), Gaps = 8/243 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 H L+ A+ N + CV+YQPI+ L +G++VG EAL RW L P +F+ +A++ GL++ Sbjct: 444 HELRRAVANHEFCVYYQPIIHLPSGRLVGFEALVRWRHPTRGILLPAAFLHVAEEAGLND 503 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 + ++ V + + W R +P+ +S+NL + + + L ++ YQV P Sbjct: 504 SIGWQVLEQVCQQLVVWRRLNPRAAALSVSVNLSARQVMQPNLYDRLMQLLAQYQVPPTA 563 Query: 390 IALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LELTE F + A +++R RE G +I +DDFG GYSSLSYL L +D +KID++F Sbjct: 564 LKLELTESTFMEYSHDVAALLNRLREQGIQIAIDDFGVGYSSLSYLVQLPIDQIKIDRNF 623 Query: 449 VDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 + LE K + I+ +A L L++VAEG+ET Q +W+R G YGQG+L L Sbjct: 624 IVQLESKQHSQAIVNTIVNLAHNLNLEVVAEGVETQGQLDWIRAVGCQYGQGYLIGLPLT 683 Query: 505 KED 507 ++ Sbjct: 684 ADE 686 >UniRef50_A1JST1 Putative membrane protein n=3 Tax=Yersinia RepID=A1JST1_YERE8 Length = 509 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 91/236 (38%), Positives = 139/236 (58%), Gaps = 5/236 (2%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 AIE RD + QP + +I+GAEAL RW Q DGS+L P F+P A+++G PL Sbjct: 266 AIERRDFVLFLQPQWDMEERRIIGAEALLRWRQADGSYLLPSEFVPDAEESGAMMPLGSW 325 Query: 338 IIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 ++ + DW Q +++N+ + + I L+ +I Y ++P Q+ LE+TE Sbjct: 326 VLEEACRILADWKAQGMNLSLAVNISGLQIQCDSIITHLKTVIGRYNIDPSQLVLEITET 385 Query: 398 EFADPKTSAPIISRYREA-GHEIYLDDFGTGYSSLSY---LQDLDVDILKIDKSFVDALE 453 +A ++ R + G I LDDFGTGYSSL Y L+ L V+I+K+DKSFV L Sbjct: 386 AQIQNLDAAYVLLRELQGLGLSIALDDFGTGYSSLQYLNHLKSLPVNIIKLDKSFVKHLP 445 Query: 454 YKNVTPHIIE-MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + II ++ LKL+++AEG+ET +Q +WL +HG+ GQG+L+S+ L +E+F Sbjct: 446 EDDAMARIISTISDVLKLRVMAEGVETEEQRQWLLKHGIRCGQGFLFSEPLSREEF 501 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/243 (39%), Positives = 143/243 (58%), Gaps = 6/243 (2%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 +RL+ AI N D +HYQP VSLA+ +I+GAEAL RW +SP SFIPLA++TGL Sbjct: 452 NRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLII 511 Query: 333 PLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 PL ++R+ W +P IS+NL L I +++ ++ + + + Sbjct: 512 PLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLE 571 Query: 392 LELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE D + S ++++ R G +I LDDFGTGYSSLSYL+ VD LKID+SFV Sbjct: 572 LEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVR 631 Query: 451 AL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + + + II + + L L ++AEGIET Q ++L +G GQG+L SK +P + Sbjct: 632 DIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVPNK 691 Query: 507 DFL 509 +F+ Sbjct: 692 NFV 694 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 90/239 (37%), Positives = 137/239 (57%), Gaps = 3/239 (1%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 +L+ A++N +I VHYQP V GK+VGAEALARW + P FIP+A++ GL Sbjct: 423 RQLRQALDNDEITVHYQPQVDAVTGKLVGAEALARWRHPILGMVPPARFIPVAEECGLIV 482 Query: 333 PLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 L I+ + W P +S+NL + L + PQ + ++ Y++ PR + Sbjct: 483 ALGEQILEKSLRQLASWHEAGFPLPSVSVNLSARQLERQDFPQHVARLLKRYRLEPRHLE 542 Query: 392 LELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 LE+TE + + I++ R G + +DDFGTGYSSLSYL+ L V +LK+D+SF+ Sbjct: 543 LEITESVIMATEDAVNILAELRAQGIRLSIDDFGTGYSSLSYLRQLPVQVLKVDRSFILG 602 Query: 452 LEY--KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + + I+ ++ +L L+ VAEG+E + Q E+LR G H QG+LY+ LP E F Sbjct: 603 IGKGGEAIVHAIMALSSSLGLETVAEGVEEASQLEFLRSAGCHIIQGFLYAAPLPAESF 661 >UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFJ6_CALS8 Length = 1015 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 154/267 (57%), Gaps = 7/267 (2%) Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + +L+ L +I+ + L+ AIEN + ++YQP+V+L N +I EAL RW Sbjct: 746 IFMPFLLLKNLNKIEIEKN-LRKAIENDEFVLYYQPVVNLENMEIHSVEALIRWFLPHKG 804 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIP 373 +SP FIP+A+++GL + ++I +D+ DW R+ HI+INL + ++ Sbjct: 805 MVSPLEFIPVAEESGLIVRIGEMVIEKALKDLKDWERKGINDIHIAINLSARQFKTKYFE 864 Query: 374 QLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + ++ Y V+P +++ E+TE + S I+ + G + +DDFGTGYSSL Sbjct: 865 NTVAKLLEKYSVDPVKVSFEITETGAVENFDVSLKILGFLCQMGIKFLIDDFGTGYSSLI 924 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ L + +KIDKSF+ L E + + II MA L LK+VAEGIE +KQ E L++ Sbjct: 925 YLRKLPISGVKIDKSFISELMFSKESRAIVEGIILMAHKLGLKVVAEGIENNKQLEILKE 984 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 G +GQG+L+SK +PKE+ ++ Q Sbjct: 985 IGCDFGQGYLFSKPVPKEEVEKFLLQK 1011 >UniRef50_A4XG32 Diguanylate cyclase/phosphodiesterase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XG32_CALS8 Length = 509 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/246 (36%), Positives = 144/246 (58%), Gaps = 6/246 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE + YQPI+ L KI GAEAL RW + ++ P SFIP+A+QTGL + Sbjct: 263 LRKAIEQNQFKLFYQPIIDLKRMKICGAEALIRWIHPEKGFIPPLSFIPIAEQTGLISKI 322 Query: 335 TLLIIRSVFEDMGDW-LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +I D+ + + + ++S+N+ ++ + IN ++ P + +E Sbjct: 323 GEWVISRSVSDLKEIKMAINDSFYVSVNVSLKEFSTSNFVDNVLYSINSLKIEPTEFGIE 382 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE DP+ + I++ +E G +I LDDFGTGYSSL+YL+ L +DI+KID+SF+ + Sbjct: 383 ITESVAMVDPQKTIGILNFLKERGIKILLDDFGTGYSSLNYLKQLPIDIVKIDRSFIQNM 442 Query: 453 EY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 Y + + +I+++ L LK+VAEGIE +Q E L+ +GQG+L+ K +PKE+ Sbjct: 443 TYDQKEQKMAKSLIDLSHILDLKVVAEGIEDERQAELLKTFSCDFGQGYLFGKPMPKEEL 502 Query: 509 LRWAEQ 514 L A++ Sbjct: 503 LELAKR 508 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 12/240 (5%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIEN++ V+YQPI++L KIVG EAL RW ++SP FIP+A++TGL P+ Sbjct: 346 LRRAIENQEFLVYYQPIMALEKTKIVGFEALIRWQHPKKGFISPGEFIPIAEETGLIIPI 405 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 ++++ + + W + P+ IS+NL S L +I Q + +N + P + Sbjct: 406 GQIVLKEACQQLKTWQEKLPKAKNLTISVNLSSQQLKEPEILQHIDHSLNVTGLQPESLK 465 Query: 392 LELTER---EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 LE+TE E AD T+ ++ + +E +I LDDFGTGYSSLSYL VD LKID+SF Sbjct: 466 LEITESLLMENADVATT--LLRQLKERKIQISLDDFGTGYSSLSYLHRFPVDTLKIDRSF 523 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V+ + E + I+ +A L + +VAEGIET KQ +L+ +GQG+ +SK LP Sbjct: 524 VNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEKQLTFLKFLECEFGQGYFFSKPLP 583 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 92/237 (38%), Positives = 138/237 (58%), Gaps = 8/237 (3%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 AIE +++ V+YQPI+SL GKI G EAL RW + +SP +FIPLA++TGL P+ Sbjct: 1145 AIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIPIGQW 1204 Query: 338 IIRSVFEDMGDWLRQ---HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++R+ + W +Q +P +S+NL + + + + +I +VNP + LE+ Sbjct: 1205 VLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNPSTLKLEI 1264 Query: 395 TEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV---- 449 TE + SA ++ R + ++Y+DDFGTGYSSLS L +D LKID+SFV Sbjct: 1265 TESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFVSRMG 1324 Query: 450 DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 DA E + I+ +A L + +VAEGIET+ Q LR YGQG+ +SK L ++ Sbjct: 1325 DAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKPLNRQ 1381 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 144/244 (59%), Gaps = 6/244 (2%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 A+E R+ +HYQP + LA+G +VGAEAL RW + W+SP+ FIP+A+ +GL ++ Sbjct: 387 ALERREFHLHYQPKIHLASGNVVGAEALIRWQRPQQGWISPELFIPVAEDSGLITRISQW 446 Query: 338 IIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 ++ W P +SINL + ++ Q LRD ++ ++P + LE+TE Sbjct: 447 VLGEATRQCRAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDALSDNALDPAWLELEITE 506 Query: 397 RE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 + + + + + G + +DDFGTGYSSLSYL+ VD+LKID+SF+ L ++ Sbjct: 507 GVLLQNVEVTLATLLAIKALGVRLAVDDFGTGYSSLSYLRKFPVDVLKIDQSFIHGLSHE 566 Query: 456 N----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + + II + ++L LK++AEG+ET +Q +L+Q G QG+ +SKALP EDF R Sbjct: 567 HKDAVLVSAIINLGRSLNLKVIAEGVETHQQLTFLQQQGCEEAQGYYFSKALPAEDFARL 626 Query: 512 AEQH 515 +H Sbjct: 627 LGKH 630 >UniRef50_Q5ZVC2 Sensory box protein/GGDEF domain/EAL domain n=6 Tax=Legionella pneumophila RepID=Q5ZVC2_LEGPH Length = 849 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 90/245 (36%), Positives = 143/245 (58%), Gaps = 6/245 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++A+ + ++YQPI+ L++ ++G EAL RW + PD FIPLA++ G+ + Sbjct: 605 LKNAVAKNEFVLYYQPILKLSSLNVIGFEALIRWNHPRNGLILPDKFIPLAEEIGIIGEI 664 Query: 335 TLLIIRSVFEDMGDW-LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 + +V + + W L+ ISIN+ + IP+ + ++++ +QV I LE Sbjct: 665 GDWVFVTVCKQIQAWQLQGFKNIKISINISPKQFKFQYIPKRINELLSEFQVKSESIELE 724 Query: 394 LTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE D T +S+ +E G +I +DDFGTGYS LSYL+DL +DILKID++FV L Sbjct: 725 LTENILIDKSTDIIDTLSKLKEMGIQISIDDFGTGYSCLSYLKDLPIDILKIDQTFVKDL 784 Query: 453 E----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + + II MAK L ++AEGIE Q E+L++ G HYGQG+ +S P E Sbjct: 785 KNNQSNQTLIKAIIAMAKKFNLSLIAEGIENQYQLEFLKKLGCHYGQGYYFSHPKPTEKC 844 Query: 509 LRWAE 513 +++ + Sbjct: 845 MQFLQ 849 >UniRef50_A8SXY4 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SXY4_9FIRM Length = 609 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 92/239 (38%), Positives = 144/239 (60%), Gaps = 9/239 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L DAIEN D+ V+ QP + N + GAEAL RW G LSP F+P + G + + Sbjct: 355 LPDAIENEDLMVYLQPKYNPQNDTLTGAEALIRWFYKGGDILSPKYFVPQFEADGTIDII 414 Query: 335 TLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R V + +W +P IS NL ++ + +L D+++ Y V+ I E Sbjct: 415 DRYVLRKVCKKFKEWKELGYPLYPISCNLSRHQISRPDLIYILCDIVDEYGVDHSLIDFE 474 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE +FAD + ++++ ++ G +I +DDFGTGYSS++ L+D+ +DI+KIDKSF+D + Sbjct: 475 ITESADFADVQYLIEVLNQLKDKGFKISMDDFGTGYSSMALLKDMPLDIIKIDKSFIDGI 534 Query: 453 ---EYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 E N +T I+ MA+ L +K +AEG+ET +Q+E+LR+ G HY QG+ YSK +P Sbjct: 535 ATGELNNKDMLMTQDILTMARHLGIKSLAEGVETFEQKEYLREWGCHYIQGYYYSKPIP 593 >UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica KT99 RepID=A9D5G8_9GAMM Length = 1066 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 149/260 (57%), Gaps = 9/260 (3%) Query: 264 ILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIP 323 IL RIQ RL+ A+ ++ C+HYQPIV+L + I G EAL RW ++PD FIP Sbjct: 801 ILERIQ-LEQRLRQAVIRQEFCLHYQPIVNLDDRTITGVEALIRWQDPKFGMIAPDMFIP 859 Query: 324 LAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHY 383 +A++TGL EP+ +++ D+ W R + ++IN+ L + + Sbjct: 860 IAEETGLIEPIGEWVLQQALTDLAHWHRLGFKISMAINVSGRQLLGQNKTSFKCLLKALL 919 Query: 384 QVN---PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDV 439 + N P+ + +E+TE D + ++ R G +IY+DDFGTGYSSLSYL+ + Sbjct: 920 KKNDIEPQYLHIEITESMLMDDTEQCMTVLESIRSLGLDIYIDDFGTGYSSLSYLKRFPI 979 Query: 440 DILKIDKSFVD-ALEYKN---VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQ 495 ++KIDKSF+D LE ++ + I+ M ++L+LK+VAEGIET Q + L+ G +GQ Sbjct: 980 AVIKIDKSFIDNMLESESDAKLIKAIVMMGQSLELKLVAEGIETHAQWQMLQALGCDFGQ 1039 Query: 496 GWLYSKALPKEDFLRWAEQH 515 G+L+S LP ++ + Q Sbjct: 1040 GYLFSHPLPAQELASFLHQQ 1059 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/240 (38%), Positives = 137/240 (57%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E R +HYQPIV A+G +VGAEAL RW + +SP FIP+A++ GL P+ Sbjct: 780 LRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPI 839 Query: 335 TLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R V DWL R HP +++N+ +P+L+R ++ + + E Sbjct: 840 GEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFE 899 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV-DA 451 +TE + + +E G LDDFGTG+SSLSYL+ VDI+KID+SFV D Sbjct: 900 ITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDC 959 Query: 452 LEYKN---VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + +N + II MA +L L++ AEG+E+++Q E+LR G Y QG+L K L + F Sbjct: 960 PDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAF 1019 >UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z8Q2_PHOPR Length = 517 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 130/459 (28%), Positives = 222/459 (48%), Gaps = 50/459 (10%) Query: 74 CSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISK----DGYR 129 C + + E+ ++++ IQE++YI+N V CS S E ++K GY Sbjct: 58 CDKKNREELEKLNFYSSVIQEISYIENGVFLCSDRIKNSNIKV--ESSHLAKFEEQSGYV 115 Query: 130 VW--LTSHNDLGIIRYMVAMGTAHYVVMIDPASFID--VIPYSSWQIDAAIIGNAHNVVI 185 ++ + + + +MV + Y +M+D + +ID + Y+ + +GN + + Sbjct: 116 IYRATSQRRHIDALFFMVPTPSGWYRIMLD-SRYIDYWIKQYTHKDQLSGCLGNIDDSFV 174 Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFI 245 L P N+ I + + + + ++ L+K + +Q Sbjct: 175 C------------LNSPPF----NDFIFSEQIRSEKYSYALTVGYVEASLKKVYFKQ--- 215 Query: 246 WLPLGLVIGLLAAMFVLRIL-------RRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 LP I + ++F++ +L R I+S +Q I NR+ +YQPIV+ +G Sbjct: 216 -LPYATAIIITLSIFIVLLLNLSVNFRRSIKSD---IQRGINNREFHAYYQPIVNSKSGH 271 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI 358 +GAE L RW +SP FI A+ TGL +TL ++ V + ++ +I Sbjct: 272 WIGAELLVRWLHPKHGVISPAEFIHTAESTGLINTITLHLLERVAYEKTQIQAENDDLYI 331 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPI---ISRYREA 415 SIN+ + ++ + + L +I+ Y + E TERE P + + R RE Sbjct: 332 SINVTASMIINSRYVTELICIISKYPSLQHNVVFEFTERETFSPTELVELKLGMQRLREV 391 Query: 416 GHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV-----DALEYKNVTPHIIEMAKTLKL 470 G + LDDFGTGY+ LS LQ L DILKID++FV DA+ + ++ +I EM TL Sbjct: 392 GIKWALDDFGTGYAGLSTLQSLRFDILKIDRTFVASSVTDAVTH-SILDNIAEMGHTLHC 450 Query: 471 KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 MVAEG+ET++Q E++ G+ QG+ Y+K +P +D+L Sbjct: 451 TMVAEGVETAEQAEYVDDLGIEASQGYFYAKPMPFDDYL 489 >UniRef50_A8V1K8 Sensory box protein/GGDEF domain/EAL domain (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V1K8_9AQUI Length = 556 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/262 (36%), Positives = 154/262 (58%), Gaps = 20/262 (7%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 ++ + S ++L++AI N D ++ QPIV +++ KIVGAEAL RW +G+++ P FIP+ Sbjct: 296 IKDLISIENKLEEAIRNNDFDIYLQPIVKISSNKIVGAEALIRWKDENGNFIPPSKFIPV 355 Query: 325 AQQTGLSEPL---TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMIN 381 A+QTGL + + LL + E + + L++ + IS+N+ +P + I + I Sbjct: 356 AEQTGLIKEIDICMLLKAKETIEYIDNSLKKKVR--ISVNI-TPAYVNNIIEFFEKGYIP 412 Query: 382 HYQVN--------PRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 ++ I LELTERE + S ++ + + G +I +DDFGTGYSSLSY Sbjct: 413 KCKIKTDFDFSKVKELITLELTERETVEVYESKELLQKIKNIGFKISIDDFGTGYSSLSY 472 Query: 434 LQDLDVDILKIDKSFV-----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 L +LDVD LKID F+ D YK + II +AK +K +AEG+ET +Q E L++ Sbjct: 473 LINLDVDYLKIDMQFIRKITEDEKVYK-LVKSIINIAKIFGIKTIAEGVETKQQLEILKK 531 Query: 489 HGVHYGQGWLYSKALPKEDFLR 510 G ++ QG+L+S + ++F+R Sbjct: 532 LGCNFYQGYLFSPPVSVDEFIR 553 >UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3R8_DICDC Length = 500 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 152/271 (56%), Gaps = 7/271 (2%) Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 +I L + M + RI SP L+ AI N++I YQP++S + ++ G E LARW Sbjct: 229 FLIALGSGMLAYKYTSRITSPVEALKRAIRNQEIVPFYQPVISTQSRELYGFEVLARWYH 288 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTS 369 ++SPD FIPL++Q+GL PLT L++ V D+ P+ HI IN+ + Sbjct: 289 PKTGFISPDVFIPLSEQSGLIIPLTRLLMERVINDLISCQDILPEDLHIGINISAKHCQY 348 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGY 428 E + I+ ++ +E+TERE + T+ + AG I LDDFGTGY Sbjct: 349 EGFIDDCKYFIDALGTRKIRLMVEITEREKIEITPTTLRFFQNLKAAGILIALDDFGTGY 408 Query: 429 SSLSYLQDLDVDILKIDKSFVDAL-EYKNVTP---HIIEMAKTLKLKMVAEGIETSKQEE 484 S+ YL+ L D++KID+SF+ + E TP +I++A+ + LK +AEG+ET Q E Sbjct: 409 SNFDYLRQLQADLIKIDQSFISMIDENSQSTPLVNCVIDLAQNMNLKTIAEGVETEFQAE 468 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLR-WAEQ 514 +L + + Y QG+L+S+ LP ++ ++ W ++ Sbjct: 469 FLSEKNIDYLQGYLFSRPLPFDECVKTWLQK 499 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 144/248 (58%), Gaps = 6/248 (2%) Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 +L+ A+ + +HYQP++ G+++G EAL RW D + +SP FIP+A++TGL P Sbjct: 871 QLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVP 930 Query: 334 LTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 L ++R+ W+ P +++NL SE + +L+R ++ ++ + L Sbjct: 931 LGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLEL 990 Query: 393 ELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 ELTE F + + S I+ + G + +DDFGTGYSSL+YL+ +D LKID+SFV Sbjct: 991 ELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHG 1050 Query: 452 LEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 L Y + + II MA+ LKL ++AEG+E+ +Q + L QHG Y QG+L+ + +P ++ Sbjct: 1051 LAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQE 1110 Query: 508 FLRWAEQH 515 W ++ Sbjct: 1111 LEVWFREN 1118 >UniRef50_B9L5S2 Sensory box/ggdef family protein n=1 Tax=Nautilia profundicola AmH RepID=B9L5S2_NAUPA Length = 652 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/242 (39%), Positives = 141/242 (58%), Gaps = 8/242 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 + A+ N + + YQP N I+G EAL RW + DG +SP FIP+A+++G L Sbjct: 411 MNQALVNNEFKLFYQPKFD-KNKNIIGCEALIRWIR-DGQIISPLDFIPIAEKSGFIIQL 468 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 I+ V + +WL + + IS N+ + +EK L+++ Q N I +E+ Sbjct: 469 GNWIMEEVAKVQQEWLNKGIKLEISFNVSAVQFRNEKFVNDLKEIFKKSQRNL--IEMEI 526 Query: 395 TEREFADPKTSAP-IISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL- 452 TE F K A II+ R+ G I LDDFGTGYSSLS+L++ ++D+LKIDKSFVD + Sbjct: 527 TESVFIQEKDKAKTIINEIRDYGIRISLDDFGTGYSSLSFLREFEIDVLKIDKSFVDEIY 586 Query: 453 --EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 E K I+ MA+ L L+ +AEG+ET +Q L+ G Y QG+L+SK LPKE+F + Sbjct: 587 SEEGKVYVQTILNMAENLHLETIAEGVETEEQFNILKSLGCKYFQGYLFSKPLPKEEFEK 646 Query: 511 WA 512 + Sbjct: 647 FV 648 >UniRef50_Q5ZVH1 Rtn protein n=5 Tax=Legionella RepID=Q5ZVH1_LEGPH Length = 532 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 148/291 (50%), Gaps = 16/291 (5%) Query: 224 ISIITWASTK-MLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIE-- 280 +S++ + K +L W+ Q + ++I L+ + + +++ + + + LQ AI+ Sbjct: 233 VSVVVSENNKTILHNFWYSQT-----ITILIVLICSFILYALIKNMMTKRYSLQGAIKLA 287 Query: 281 --NRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 N + YQP+ + G E L RW D + PD FI A+ TGL P+TL I Sbjct: 288 IKNEEFYPVYQPLFDCDEERFTGVEVLLRWENEDSQIIMPDFFIAEAEATGLIVPITLQI 347 Query: 339 IRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 I F++ L + H++ N+ + T +I Y ++P QI E+TERE Sbjct: 348 IEIAFKEFRSLLEERSYFHLAFNISALHFTDSVFFNQFHKLIEKYNISPHQIIFEITERE 407 Query: 399 FADPKTSAPI--ISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN 456 D + I + R+ G + +DD+GTG++S+SYLQ + LKIDK FV A+ + Sbjct: 408 LLDKNDTTFINKMQELRQTGFSLAVDDYGTGHASISYLQHFPFNYLKIDKLFVQAIGSND 467 Query: 457 V----TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 + II+MAK L L +AEG+ET Q +L +GV QGW YSK L Sbjct: 468 IIESLNDAIIQMAKGLNLVTIAEGVETKDQANYLANNGVRLQQGWYYSKGL 518 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 89/249 (35%), Positives = 135/249 (54%), Gaps = 6/249 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 RR + L+ A+ ++ HYQP V LA G + GAEAL RW + L P FI +A Sbjct: 439 RRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVA 498 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 ++TGL PL ++R+ W P +++NL + + + D++ Sbjct: 499 EETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAETG 558 Query: 385 VNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 + Q+ LE+TE AD S ++ R G + +DDFGTGYSSLSYL+ +D LK Sbjct: 559 AHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLK 618 Query: 444 IDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SF+ + + + II MA++L+L ++AEG+ET Q E+L G GQG+L+ Sbjct: 619 IDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLF 678 Query: 500 SKALPKEDF 508 +A+P EDF Sbjct: 679 GRAMPAEDF 687 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 152/256 (59%), Gaps = 6/256 (2%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 +RR + L+DA+ + + YQP V + ++VG EAL RW +++PD FIPL Sbjct: 443 MRRRRELEKDLRDALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPL 502 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHY 383 A+Q G P+ I+ + +W Q ++INL + L ++P+++ +++ Y Sbjct: 503 AEQNGTIIPIGEWILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVY 562 Query: 384 QVNPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 ++ PR + LE+TE D T+A + R +G I +DDFGTGYSSLSYL+ L +D + Sbjct: 563 RLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKI 622 Query: 443 KIDKSFV-DALEYKN---VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KIDKSFV D LE ++ + II++ K+L ++++AEG+ET +QE ++ G H GQG+L Sbjct: 623 KIDKSFVQDLLEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYL 682 Query: 499 YSKALPKEDFLRWAEQ 514 YSK LP + + +Q Sbjct: 683 YSKPLPARELTLFLKQ 698 >UniRef50_Q1AYR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYR2_RUBXD Length = 754 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 137/240 (57%), Gaps = 8/240 (3%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + L+ AIE + HYQPIVSL G I G EAL RW + + PD F+P+A++TGL Sbjct: 500 ENELRRAIEREEFTAHYQPIVSLKTGLISGFEALVRWRHPERGLIRPDEFVPVAEETGLI 559 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 PL L ++R + W R+ PQ +S+NL L ++P+ + ++ ++ R Sbjct: 560 VPLELSVVREACASLVSWQREFPQHRPLTMSVNLSRNQLARPELPEQVERILLETGLDAR 619 Query: 389 QIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 + LE+TE + ++A +SR R+ +++DDFG GYSSLS L L +D LK+D+S Sbjct: 620 SLRLEVTESAIMENVGSAAATLSRLRDMNIRVHIDDFGMGYSSLSVLHQLPIDALKVDRS 679 Query: 448 FVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 FV ++ N + II +A L L +VAEG+E + + LR+ G Y QG+L+S+ L Sbjct: 680 FVGRMDGANDDVEIVQTIITLAHNLGLDVVAEGVEREEHLDRLRRLGCDYAQGFLFSEPL 739 >UniRef50_B9MNQ0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MNQ0_ANATD Length = 549 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 144/247 (58%), Gaps = 8/247 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE ++YQPIV L ++ GAE L RW +SP SFIP+A+QTGL + Sbjct: 303 LRKAIEKDQFVLYYQPIVDLEKMQLCGAEGLIRWIHPQKGLISPMSFIPIAEQTGLISQI 362 Query: 335 TLLIIRSVFEDMGDWLRQHPQQ--HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 ++ V D+ +R+ +IS N +S + I + +P + + Sbjct: 363 GQWVLTKVITDLKS-IREVTNHNFYISFNASLREFSSANFVDNVLYTIEALKGDPTSLGI 421 Query: 393 ELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE ADP+ + ++ ++E G +++LDDFGTGYSSL+YL+ L +D++KID+SF+ Sbjct: 422 EITESVAMADPQNTIKSLNTFKEKGIKVFLDDFGTGYSSLNYLKQLPIDVVKIDRSFIAN 481 Query: 452 L----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + + + + +I ++ L LK+VAEGIE S+Q E L+ +GQG+L+ K LPK+ Sbjct: 482 MSTDIKEQKIAKSLINLSHILDLKVVAEGIENSQQAEILKSFECDFGQGYLFGKPLPKDQ 541 Query: 508 FLRWAEQ 514 F+ +A++ Sbjct: 542 FIEFAKR 548 >UniRef50_B9L066 C-di-GMP phosphodiesterase A n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L066_THERP Length = 1008 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 134/236 (56%), Gaps = 6/236 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E ++ +HYQP++++++G++ EAL RW D +SP F+PLA+ TGL L Sbjct: 753 LRRALEQGELQIHYQPVIAVSSGRLTSLEALVRWHHPDRGPISPAVFVPLAETTGLISQL 812 Query: 335 TLLIIRSVFEDMGDWLRQ--HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 T ++ + W R P+ IS+NL +PQL+ D++ + PR++ L Sbjct: 813 TQWVLLQACRQLWAWSRAGLAPELSISVNLSPTDFLHLDVPQLVDDILQVTGLEPRRLTL 872 Query: 393 ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 ELTE DP S + R R G + +DDFG GYSSL YL+ L V LKID++ V + Sbjct: 873 ELTESAMLDPAVSRERLERLRALGIAVLIDDFGAGYSSLGYLKQLPVSGLKIDRTLVADI 932 Query: 453 EY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 ++ V I+E+A L+L + AEGIE+++Q LR+ G HY QG+ + P Sbjct: 933 DHDPASTAVVRSILELAGALELSVTAEGIESARQLAVLRELGCHYAQGFFVGRPAP 988 >UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DZ3_SACD2 Length = 682 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 144/247 (58%), Gaps = 6/247 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI + + +++QP V G++ G EAL RW + +L+PD FIP A++T L + Sbjct: 425 LEPAILDNQLIIYFQPKVLAETGEVAGCEALVRWQHPEEGFLTPDKFIPYAEETPLIREI 484 Query: 335 TLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +IR + + +W + + I++NL S KI ++L++ + ++P + +E Sbjct: 485 DYYVIRECCKKLKEWAARFDKPVPIAVNLSGRHFRSFKIVEVLKEAVASAGISPDLLEIE 544 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE ADP + ++ + G I LDDFGTGYSSL+YL+ L +DI+K+D+SF+ + Sbjct: 545 ITEAVLIADPDKAQKVVHAIKSIGFTISLDDFGTGYSSLNYLRTLPIDIIKLDRSFIANI 604 Query: 453 EY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + +T I +AK L L MVAEG+ET Q + L G H QG+ +SK +P+ +F Sbjct: 605 DTSEQDRRLTRGITSLAKGLDLTMVAEGVETESQLQTLLDLGCHCFQGYYFSKPVPETEF 664 Query: 509 LRWAEQH 515 L W +++ Sbjct: 665 LAWHKKY 671 >UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Edwardsiella RepID=D0ZGP0_EDWTE Length = 668 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 137/235 (58%), Gaps = 2/235 (0%) Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 +A+ D ++ QP + L + ++ GAEAL RW + DG P FIPLA++ G L Sbjct: 421 NALRQGDFELYLQPQIDLRSQRLAGAEALIRWHRQDGGCSEPSQFIPLAEEQGGIVALGE 480 Query: 337 LIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 +++ + DW R+ +S+N+ + L + Q L ++ + ++ +++ LE+TE Sbjct: 481 WVLKEAVRILVDWQRRGLTIPLSLNVSALQLVDARFGQRLETLLQQHAISAQRLHLEITE 540 Query: 397 REF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 + +D + +A + R R G + LDDFG GY+ L+YL+ L VDILKIDKSF+D + Sbjct: 541 TAYISDIRRAADTLDRLRNQGVRVALDDFGMGYAGLNYLRHLPVDILKIDKSFIDQIPLD 600 Query: 456 NVTPHII-EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 I+ +A+ L L +VAEG+ET Q +WL +G+HY QG+ +S AL + DFL Sbjct: 601 GALVRIVGSIAEVLSLDVVAEGVETQGQCDWLLANGIHYAQGYFFSPALSQRDFL 655 >UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Reinekea blandensis MED297 RepID=A4BFV7_9GAMM Length = 814 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 150/259 (57%), Gaps = 26/259 (10%) Query: 266 RRIQSPHH---RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 RR Q H ++ +A+ D +HYQPI L + + + AEAL RWP T L+PD FI Sbjct: 555 RRAQEKWHLERQMTEALAAHDFQLHYQPIFDLDSNRCIAAEALLRWPSTQ---LAPDQFI 611 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISIN-----LESPVLTSEKIPQLL 376 P+A++TGL P+ I+ + W + + ++S+N L+ P + I Sbjct: 612 PVAEETGLIHPMGNWILSTAVRQWAQWHDEGRELTYLSVNISVLQLQQPGFIDQAI---- 667 Query: 377 RDMINHYQVNPRQIALELTEREFADPKTSAPIIS---RYREAGHEIYLDDFGTGYSSLSY 433 + Y + P ++ LE+TE +TS ++S R R+AG+ + +DDFGTG+SSL+Y Sbjct: 668 -SLTKQYHLPPGRLVLEITESILL--QTSPNVLSQINRLRQAGYRLAIDDFGTGFSSLNY 724 Query: 434 LQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ L +D LK+D+SFV+ + N + I++MA + +++VAEG+ET +Q WL+Q Sbjct: 725 LKQLPIDYLKVDRSFVEGIIENNQDSAIYRAIVDMAMAMDIEIVAEGVETPQQMLWLKQQ 784 Query: 490 GVHYGQGWLYSKALPKEDF 508 GV + QG+ Y++ALP E F Sbjct: 785 GVTFAQGYFYTQALPPEKF 803 >UniRef50_Q5QUC0 Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains n=1 Tax=Idiomarina loihiensis RepID=Q5QUC0_IDILO Length = 829 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/265 (36%), Positives = 154/265 (58%), Gaps = 11/265 (4%) Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + L F + +R++ +L++AI+ + ++ QP V++ K GAEAL RW Q+D Sbjct: 562 VSLFRQEFADAVSKRVK-LEEQLRNAIKQNEFELYLQPQVNI-ESKPTGAEALIRWKQSD 619 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTS 369 G ++SP FIPLA++TGL PL I + + W +Q P++ +SIN+ + Sbjct: 620 GRFVSPADFIPLAEETGLIVPLGYWITERACQILQQW-QQSPEKAKMQLSINVSAKQFQQ 678 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAP-IISRYREAGHEIYLDDFGTGY 428 + + ++ ++ Y++ P ++ LELTE D +S I + + G E LDDFGTGY Sbjct: 679 PEFVEQVQLLVEKYEIRPHRLKLELTESLLMDDISSVTNKIKQLKRLGIEFALDDFGTGY 738 Query: 429 SSLSYLQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLSYL + D LKID SFV D++E + II++ ++LKL +VAEG+ET +Q Sbjct: 739 SSLSYLMQIPFDTLKIDVSFVRNMLDSMEKAQIVYTIIQLGESLKLNIVAEGVETEEQFN 798 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFL 509 +L + QG+L+SK +P+ +FL Sbjct: 799 YLARLNCDTFQGYLFSKPVPESEFL 823 >UniRef50_B1XJQ6 Two-component response regulator; GGDEF domain protein n=3 Tax=Cyanobacteria RepID=B1XJQ6_SYNP2 Length = 602 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 134/240 (55%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L DAI+N + ++YQP +S GKIVGAEAL RW +SP FIPLA++ GL + Sbjct: 342 LYDAIQNNQLTLYYQPKISTTTGKIVGAEALIRWFHPTLGMVSPAKFIPLAEKNGLIASI 401 Query: 335 TLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 + R+ W+ R I++NL ++ + L ++ Y +NP QI LE Sbjct: 402 GEWVFRAACHQAQQWMQRGMSDLRIAVNLSGRQFYQAQLVENLVEITQQYGINPAQIELE 461 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE +D + + + + +G I +DDFGTGYSSLSYLQ+ DILKID+ FV + Sbjct: 462 VTESILISDVELAIAHLQALKNSGFPIAIDDFGTGYSSLSYLQNFPFDILKIDRCFVRNV 521 Query: 453 EYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + HII MAK L+L VAEG+ET + E+L+ QG+L+S +P E F Sbjct: 522 AHNITNSTIVKHIIMMAKQLELTTVAEGVETMAELEFLKTQHCDEIQGFLFSPPVPAEKF 581 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 94/246 (38%), Positives = 141/246 (57%), Gaps = 16/246 (6%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ + C+HYQPIV ++G+ V EAL RW + PD FIP+A++TGL EP+ Sbjct: 837 LRSAVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPI 896 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSE-------KIPQLLRDMINHYQVNP 387 +I+ D LRQ Q I IN+ V + +L ++ Y V P Sbjct: 897 GEWVIQQALRD----LRQCHSQGIMINMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAP 952 Query: 388 RQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + + +E+TE AD + S ++ R G EIYLDDFGTGYSSLSYL+ + ++KIDK Sbjct: 953 QYVHIEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDK 1012 Query: 447 SFVD-ALEYK---NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFVD LE + N+ II M ++L +++VAEG+E+ Q +L+ G + QG+L +K Sbjct: 1013 SFVDNMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKP 1072 Query: 503 LPKEDF 508 +P ++ Sbjct: 1073 MPLKEL 1078 >UniRef50_D0HE44 GGDEF family protein n=5 Tax=Vibrio RepID=D0HE44_VIBMI Length = 674 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 139/243 (57%), Gaps = 5/243 (2%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 A+ N D+ +++QP VS+ VGAEAL RW S ++ I +A+Q GL + Sbjct: 424 AVRNNDLMLYFQPKVSVKTQHWVGAEALLRWKHPVLGEFSNETLIHMAEQNGLIFEVGHF 483 Query: 338 IIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 ++ + DWL P I+IN+ S L + + + + D++ Y Q+ LE+TE Sbjct: 484 VLHQALKAASDWLSICPTFRIAINVSSVQLKNSRFVEQIHDLLTFYHFPAHQLELEITES 543 Query: 398 EF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY-- 454 D T+ I++R G + LDDFGTGY+S YL+ D +KIDKSF++ +E+ Sbjct: 544 GLIVDEPTAIDILNRLHGLGVTLSLDDFGTGYASFQYLKKFPFDGIKIDKSFLEQIEHSE 603 Query: 455 --KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + + ++ +AK LKLK+VAEGIET +QE+++ +HG GQG+LY + +P + F + Sbjct: 604 NDQEIVRSMLHVAKKLKLKVVAEGIETKQQEQFILEHGCDIGQGFLYGRPMPSDAFEQKL 663 Query: 513 EQH 515 +QH Sbjct: 664 KQH 666 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 143/254 (56%), Gaps = 6/254 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 R++ L+ A+E +HYQP V ++G I G EAL RW + G + PD FIP+A Sbjct: 705 RQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGVEALIRWRNSAGEIVYPDQFIPVA 764 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 ++TGL P+ L ++RSV + W R+ HP S+N+ + + ++ + Q Sbjct: 765 EETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSVNVSARQFQEGHLVGQIKAALQENQ 824 Query: 385 VNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 +NP+ + LE+TE DP+ + ++ + G + LDDFGTGYSSL YL+ +D+LK Sbjct: 825 INPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGYSSLGYLKQFPIDLLK 884 Query: 444 IDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SF++ + + + + I+ MA +L + ++ EGIE +Q + + H Y QG+ Y Sbjct: 885 IDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQRVNLHACDYVQGFFY 944 Query: 500 SKALPKEDFLRWAE 513 S+ +P ++ + E Sbjct: 945 SRPMPYDELALFFE 958 >UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C9RWE1_GEOSY Length = 818 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 93/270 (34%), Positives = 148/270 (54%), Gaps = 12/270 (4%) Query: 244 FIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAE 303 F++ + I L M + R LRR A+EN + ++YQP + L + +++G E Sbjct: 545 FLFFTEPMAIRLHEKMAMERDLRR----------ALENEEFELYYQPQIRLHDRQVIGME 594 Query: 304 ALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLE 363 AL RW + +SP FIP+A+QTG+ P+ +IR+ E L + P +SINL Sbjct: 595 ALIRWRHPEKGMVSPSLFIPVAEQTGMIIPINEWVIRTACEQTKQLLDRFPDLSVSINLS 654 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDD 423 S + L ++ + P + LE+TER D + + I+S+ + G I +DD Sbjct: 655 PYEFESRRFVDKLARLLADAGLPPHHLDLEITERMTMDTERALDILSKLKGLGVTISMDD 714 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN--VTPHIIEMAKTLKLKMVAEGIETSK 481 FGTGYSSLSYL DL +D LKID+SFV ++ K + P II + + +K++AEG+ET Sbjct: 715 FGTGYSSLSYLTDLPIDRLKIDRSFVQHIQGKKDVILPAIIRLGHNIGVKVLAEGVETET 774 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + +L+ QG+ +S LP ++ +R+ Sbjct: 775 EAAYLQGKRCDEAQGYYFSPPLPYDELVRF 804 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 6/286 (2%) Query: 235 LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSL 294 L K W + +FI+LP+ + +L + LRR S ++ A+ NR VHYQP+ S+ Sbjct: 232 LLKAWRQALFIFLPMAAIFSILLMILTANWLRRRISWRDEIRRAMRNRQFSVHYQPVYSV 291 Query: 295 ANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP 354 A G EAL RW +G + PD FI A++ G+ PLT ++ + ED+ W + P Sbjct: 292 AEQHCNGVEALLRWHLPNGDTIRPDIFISAAEEEGMIVPLTRHLLELMAEDIQSW-QVAP 350 Query: 355 QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYR 413 HI +NL + L + + Q QI LELTER D + A + + Sbjct: 351 GFHIGLNLAAEHLQHPDFVKDIELFARRVQDKKLQITLELTERSLIHDGEDVARKLRLLQ 410 Query: 414 EAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLK 469 G + +DDFGTG+ SLSYL +D LKID+ F++A+E + V II +A+ L+ Sbjct: 411 SQGMRVAIDDFGTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPVLDAIINLARKLQ 470 Query: 470 LKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 L+++ EG+ETS Q ++L+Q GV + QG+ Y+ + + W + Sbjct: 471 LEVLGEGVETSLQFQYLQQRGVLFIQGYYYAWPMDNDRLRTWLNEQ 516 >UniRef50_A4CBR3 Predicted signal transduction protein containing sensor and EAL domains n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CBR3_9GAMM Length = 834 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 5/246 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L AI N + +++QP + L N I G+EAL RW + ++ PD FIP+A+ GL + Sbjct: 585 LHQAIANNEFSLYHQPQIDLRNNSIYGSEALLRWKHPELGFIPPDEFIPVAESAGLINEI 644 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 T ++ L P ISIN+ + L ++P L ++ + P I +EL Sbjct: 645 TEWVVEQALLHHKHILSSLPSHKISINISARDLNKRELPVQLLTLLTELNIKPSSIVIEL 704 Query: 395 TEREFADPKTSAP-IISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE KT A ++ ++E G ++ +DD+GTGYSSL+YL L +KIDK FV LE Sbjct: 705 TESATVKDKTEAKNVLDDFKEMGIKVAIDDYGTGYSSLAYLSQLGFHEIKIDKQFVFNLE 764 Query: 454 ----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 ++ + IEMAK L +VAEG+E+ + LRQ+G QG+ +SK +P ++ Sbjct: 765 SNRRHQTICKTTIEMAKNLDAYVVAEGVESELVAKMLRQYGCEIAQGYYFSKPMPFSEYC 824 Query: 510 RWAEQH 515 +W E++ Sbjct: 825 QWLERY 830 >UniRef50_Q2RR44 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR44_RHORT Length = 678 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 92/243 (37%), Positives = 137/243 (56%), Gaps = 3/243 (1%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE +HYQP + L + +I G EAL RW +G + P FI +A++TG+ + Sbjct: 427 LRSAIEKGQFVLHYQPKLDLRSNRISGCEALIRW-DLNGDLVPPGRFISIAEETGMIYDI 485 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 L ++R + W R I+IN+ L E+ D+I +P + +E+ Sbjct: 486 GLWVLREACQAQRRWRRHAGAVPIAINVSVRQLKDERFIDDFLDIIQASGADPELLEVEV 545 Query: 395 TEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE + + SA ++ R G + +DDFGTGYSSL+YL++L +DILKID+SFV L Sbjct: 546 TESALMSSIEVSAHLLREMRSHGVRLSIDDFGTGYSSLAYLKNLPIDILKIDRSFVSDLP 605 Query: 454 YKNVTPH-IIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 ++ P II +A + L+ VAEGIET Q WLR +G QG+L K LP+ DFLR+ Sbjct: 606 EESSIPRMIIGLAGQMGLRTVAEGIETEGQLAWLRDNGCDMIQGFLIEKPLPEADFLRFV 665 Query: 513 EQH 515 + + Sbjct: 666 DAY 668 >UniRef50_Q6LJ31 Putative uncharacterized protein n=3 Tax=Vibrionaceae RepID=Q6LJ31_PHOPR Length = 536 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 120/459 (26%), Positives = 230/459 (50%), Gaps = 46/459 (10%) Query: 74 CSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTF-PEPGKISKDGYRVWL 132 C ++++V+Y+ +I+ + N+ QC+S + S P ++S + +W+ Sbjct: 87 CKALDETKIQQVAYNDYFIRRITLTTNDGEQCTSFKGASAESKLLPLIDQLSTN-LSLWV 145 Query: 133 TS----HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH--NVVIT 186 TS +L ++ + G+ +V ++P + + I+ N + N V++ Sbjct: 146 TSELGDQENLLVVEWKDKRGSM--LVHMEP-------------LISDILKNKYCDNCVLS 190 Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEM----NISIITWASTKMLQKGWHRQ 242 S IT + + ++ PL N+ I T+ ++L K +++ Sbjct: 191 S--------ITSTDHPAASFWRGDASLLEVKPLMSSEFANNLRIDTFVKPELLAK--YKE 240 Query: 243 VFIWLPLGLVIGLLAAMFVL--RIL-RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 +WLPL L+ G + +F+ R+ +R S H ++ + N++ +YQPIV++ + + Sbjct: 241 A-LWLPLFLLGGGIGVLFIAMHRLFDQRRMSLHSMVEQGLVNKEFIPYYQPIVNVTSQSL 299 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHIS 359 G E LARW + +SP FIP +++G P+T +I+ +++G Q+ +Q IS Sbjct: 300 YGCEMLARWKRPGQELISPMEFIPYVEKSGQILPITEQLIKKAIDEIGKLNWQNTKQIIS 359 Query: 360 INLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHE 418 IN+ L S +I D++ ++ Q+A E+TER+ F + + +I R+ G + Sbjct: 360 INVVPEQLESIEIIDRSLDLLRSSKLEATQLAFEVTERKPFNNLTMAFDVIEYLRDKGID 419 Query: 419 IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVT----PHIIEMAKTLKLKMVA 474 + LDD GTGY SY+Q+L++ +KIDK FV+ + ++ II K ++M+A Sbjct: 420 VKLDDAGTGYGGFSYIQELNIRSIKIDKMFVENIGTSDIKLSLLDSIIAFGKQAGMEMIA 479 Query: 475 EGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 EG+ET +Q E+L + GV+ QG+ + + + DF + + Sbjct: 480 EGVETKEQSEYLAEQGVYLQQGYYFGRPMVFRDFAYFCK 518 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 133/482 (27%), Positives = 212/482 (43%), Gaps = 44/482 (9%) Query: 52 ANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSS---- 107 A ++ Q + L+R+ G C+ E++R+ + Y + + I N CSS Sbjct: 53 AENISAQAWKMVDRLQRFHGQPCNIIG-DELQRLGSVFSYFRAIGVIHNTNVYCSSTFGS 111 Query: 108 -------LEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS 160 + + P+T+ E +S G I M G Y M+D Sbjct: 112 TLTPISRVIQQPLPETYSERWSLSIAGSDN--VKERPALIFVQMPLTGDGAYA-MVDAQY 168 Query: 161 FIDVI----PYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDI 216 ID++ +Q+ + N H + + I R+ +E + I Sbjct: 169 LIDLMIAISKIRGYQLTLKM-DNGHPI------QTGPAITPRIGLFSTSALEIRSSRFPI 221 Query: 217 LPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 ++I AS ++ W + F +LPL +++ LL + +R ++ Sbjct: 222 ------TLNITAPASQEI--ANWKQAFFTFLPLAIILSLLFTTAIWYWQKRKLLFRDEIR 273 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 I N + V+YQPI + G E L RW +++G W+ PD FI A+ + P+T Sbjct: 274 KGIANGEFSVYYQPIYDAESQTCTGVETLLRWRRSNGKWIRPDIFISAAEAESMIIPITR 333 Query: 337 LIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 + V D+ W + P H+ +N+ + L + + I+LELTE Sbjct: 334 HLFDLVASDIASW-QVKPGFHLGLNVAAEHLHHPSFVSDVHRFAEKVASHSLSISLELTE 392 Query: 397 REFADPKTSAPIISRY---REAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL- 452 R II R RE G I +DDFGTG+ SLSYLQ+ +D LKID+ FV A+ Sbjct: 393 RNLIS--NGPEIIQRLHQLREDGFMITIDDFGTGHCSLSYLQNFPLDCLKIDQGFVSAIS 450 Query: 453 ---EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 E + II ++ + L+ VAEG+ET +Q +L+QHGV Y QG+LY+K + E FL Sbjct: 451 SPDEEAPILDAIINLSHRINLQSVAEGVETKQQLMYLQQHGVKYIQGFLYAKPMDNESFL 510 Query: 510 RW 511 W Sbjct: 511 VW 512 >UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TT69_ALKMQ Length = 1242 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 143/241 (59%), Gaps = 8/241 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI+N + V+YQP V+L +I+GAEAL RW +SP FI LA++TG L Sbjct: 839 LRRAIKNNEFKVYYQPQVNLQTSEIIGAEALIRWEHPTWGLVSPKEFISLAEETGFIITL 898 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 I+R V E WL+ P +S+N + I + +++ I+ +Q++P + +E Sbjct: 899 GNWILRQVCETYQKWLKDGLPAIKVSVNYSGIQFFQKDIVENIKNTIHEFQLDPHFLVME 958 Query: 394 LTEREFAD--PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 +TE + + SA I S +E G ++ +DDFG G+SSL+YL +VDILKID+ F+ Sbjct: 959 ITETVLMNQSQQVSADIQS-LQELGIKVAIDDFGAGFSSLTYLNSFNVDILKIDRFFIKG 1017 Query: 452 LEYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + + IIE +AK L++++VAEG+ET Q +LR+ GQG+LYS+ +P+ED Sbjct: 1018 IPLDETSNRIIEAVINLAKDLRIRLVAEGVETWDQLSYLRKLNCTVGQGFLYSRPVPQED 1077 Query: 508 F 508 F Sbjct: 1078 F 1078 >UniRef50_A4BL55 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BL55_9GAMM Length = 945 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 138/241 (57%), Gaps = 6/241 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ N ++ VHYQP V LA+G+IV AEAL RW + + P+SFIPLA+++ L + Sbjct: 696 LRYAVRNGELRVHYQPQVELADGRIVAAEALVRWERPGHGLVPPNSFIPLAEESDLIVQI 755 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R V D+ W P IS+N+ + L ++ R +++HY ++ +E Sbjct: 756 DSEVLRHVAADLQCWSENGFPLPKISVNVSARQLYRGRLLDDFRQVLDHYPAARGRLEVE 815 Query: 394 LTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTER D + ++ + G +DDFGTGYSS Y +D + LKID+SF+ L Sbjct: 816 LTERLLVDAVPQNRRVLDALVDLGVTFAIDDFGTGYSSFGYFRDFLIHTLKIDRSFIQQL 875 Query: 453 EYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + +T II +AKT +++VAEG+E Q+ +L QHG QGWL+ K +P ++F Sbjct: 876 AEEAADARITLAIIGLAKTFDIEVVAEGVELPAQQAFLCQHGCARAQGWLFGKPMPTDEF 935 Query: 509 L 509 + Sbjct: 936 I 936 >UniRef50_Q8ERE5 Nitrogen fixation positive activator n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERE5_OCEIH Length = 539 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/237 (37%), Positives = 144/237 (60%), Gaps = 6/237 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++A+ + + YQPI++L + K+VGAEAL RW + ++SPD FIP +++G+ + Sbjct: 294 LKEALAREEFSIMYQPIINLKSHKVVGAEALLRWNNRELGFVSPDEFIPKLEESGMIISV 353 Query: 335 TLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEK-IPQLLRDMINHYQVNPRQIAL 392 I+ +V M W + Q IS+N+ SP+ +K Q +++++N ++ + + Sbjct: 354 GKWILENVCRRMKSWQEKGLLMQRISVNV-SPIQFKDKYFVQDVKEILNDTMLDASYLEI 412 Query: 393 ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 E+TE + ++S I + G + +DDFGTGYSSLSYL+ L +D LKIDKSF+D L Sbjct: 413 EITESTILNLESSMLTILELKSLGMHVSIDDFGTGYSSLSYLKQLPIDTLKIDKSFIDDL 472 Query: 453 EYKN--VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL-PKE 506 + +T II M K L +++AEGIE+ KQ E+L+ H GQG+L+SK + P E Sbjct: 473 DRDGEIITNTIINMGKNLHFRIIAEGIESEKQLEYLKSQQCHEGQGYLFSKPVQPNE 529 >UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobacteriaceae RepID=YCGG_ECOLI Length = 507 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 158/295 (53%), Gaps = 25/295 (8%) Query: 229 WASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHY 288 ++ +++ KG+ +FI L+I AA + R + +P L+ AI N +I Y Sbjct: 212 FSFYRLIDKGFGILIFI-----LLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFY 266 Query: 289 QPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGD 348 QP+V+ G + G E LARW Q G ++SP +FIPLA+++GL PLT ++ V M Sbjct: 267 QPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNA 326 Query: 349 WLRQHPQQ-HISINLE-----SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 + P+ HI IN SP E + RD +N + LE+TERE + Sbjct: 327 IASKLPEGFHIGINFSASHIISPTFVDECLN--FRDSFTRRDLN---LVLEVTEREPLNV 381 Query: 403 KTSAPIISRYR---EAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYK 455 S ++ R E G I LDDFGTGYS LSYL DL +D +KID SFV + E Sbjct: 382 DES--LVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPEST 439 Query: 456 NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + ++++A+ L + +VAEG+ET +Q ++L Q+ + + QG+ + K + D ++ Sbjct: 440 RILDCVLDLARKLSISIVAEGVETKEQLDYLNQNYITFQQGYYFYKPVTYIDLVK 494 >UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Clostridiaceae RepID=A8MM18_ALKOO Length = 703 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/268 (33%), Positives = 151/268 (56%), Gaps = 7/268 (2%) Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 +G+ A + L IQ +L+ I N + V+YQP + L +++G EAL RW Sbjct: 432 VGIYAPYMTEKTLDYIQMSS-QLRYGIHNEEFTVYYQPQIDLKTNEVIGTEALIRWLHPK 490 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEK 371 ++ P+ FIP A+ TG + + ++V E W ++ + +S+NL S +LT + Sbjct: 491 KGFIPPNDFIPFAETTGYITEIEKWVFKTVVEQKVKWQKEGYDNFKVSVNLSSKMLTHPQ 550 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSS 430 + ++ +++ Y ++ I +E+TE D + + ++ + +E I LDDFGTGYSS Sbjct: 551 LLAYIKKILDEYNISGDYIEMEVTETAIIDNLEKATDVLKQLKELNITIALDDFGTGYSS 610 Query: 431 LSYLQDLDVDILKIDKSFVDALEYKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWL 486 L+YLQ L +DILKID+ F+ ++ N HI I++A +L LK+VAEG+ET Q ++L Sbjct: 611 LTYLQKLPIDILKIDRDFIKNIQDINDEAHILKLVIDLAHSLGLKVVAEGVETEAQLDYL 670 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 R++ QG+ +SK LP+ D + E Sbjct: 671 RKNHCDIVQGYYFSKPLPEADIKTFLEN 698 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 140/247 (56%), Gaps = 17/247 (6%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ V+YQPIV +++G+I AEAL RW +SP FIPLA++TGL P+ Sbjct: 681 LRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPI 740 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 + R + + W R+ H IS+N +SPV + + V+ I +E Sbjct: 741 GEWVFRQAVQQVVQWRRKFHRSFQISVN-KSPVQFRHAESLSWPEYLEQQHVSGDSIIVE 799 Query: 394 LTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D + + R+R+AG ++ +DDFGTGYSSLSYL++ D+D LKID+SFV Sbjct: 800 ITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFV--- 856 Query: 453 EYKNVTP---------HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 +N+ P II MA L K++AEG+ETS Q E L G YGQG+LYS+ L Sbjct: 857 --RNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPL 914 Query: 504 PKEDFLR 510 P E+F R Sbjct: 915 PPEEFER 921 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 160/299 (53%), Gaps = 18/299 (6%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++++ A T M K R F + + + L+ + + R LRR A+ N + Sbjct: 768 TLLSNAETAMYGAKDEGRNHFKYFTQEMNLALIERLGMERDLRR----------AVANDE 817 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 C+ YQP+V + +G++ EAL RW + +SP FIP+A+ GL L ++ Sbjct: 818 FCLFYQPVVDMESGEVTSLEALLRWQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKAL 877 Query: 344 EDMGDWLRQHPQQHISINLESPVLTSEK--IPQLLRDMINHYQVNPRQIALELTEREFAD 401 D+ ++IN+ + ++ + + LR ++ + + PR + +E+TE D Sbjct: 878 ADLARLHTLGFGLSMAINVSACQCHCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLD 937 Query: 402 PKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKN 456 ++ R+ G IYLDDFGTGYSSLSYL+ + +KIDKSFV+ L + Sbjct: 938 NSHHCLDTLNNIRDLGCAIYLDDFGTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESDAS 997 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + I+ M+K+L +K+VAEGIE+ Q+ +L+ G +GQG+LYS+ LP E+ L W E+H Sbjct: 998 LVRAIVNMSKSLGMKLVAEGIESKDQQAFLQALGSQFGQGYLYSRPLPFEELLPWLERH 1056 >UniRef50_C9XN33 Putative signaling protein n=5 Tax=Clostridium difficile RepID=C9XN33_CLODC Length = 759 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 16/248 (6%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + DA++N V+ QP V L+ KIVGAEAL RW +SP FIP+ ++ G Sbjct: 501 EQEMHDALKNEQFKVYLQPKVDLSTTKIVGAEALVRWQHPKKGLISPGVFIPIFEKNGFI 560 Query: 332 EPLTLLIIRSVFEDMGDWLRQH-PQQHISIN-----LESPVLTSEKIPQLLRDMINHYQV 385 L + + V ++ W ++ P ISIN LE+P SE L + Y++ Sbjct: 561 TELDMFVFAQVCKNFKRWENENFPTFPISINLSRVHLENPGFISE-----LERITKEYEI 615 Query: 386 NPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 P I +ELTE F + K I+ + G +I +DDFG+GYSSL+ L+D+ +D+LK+ Sbjct: 616 EPNLIEIELTESAIFDNTKILFKIMQTLKSVGFKISMDDFGSGYSSLNMLKDMPIDVLKL 675 Query: 445 DKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+ F +A + + V I++MAK L +K+V+EG+ET +Q E+LR G QG+L++ Sbjct: 676 DRQFFITVGNAKKSQIVVSSIVQMAKQLDIKVVSEGVETVEQAEFLRFIGCDMAQGFLFA 735 Query: 501 KALPKEDF 508 + +P E++ Sbjct: 736 RPMPIEEY 743 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 141/244 (57%), Gaps = 8/244 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+DA+ + + +HYQP + L +G++ G EALARW + +SP FIPLA++ GL L Sbjct: 683 LRDALRSGGLRLHYQPQLDLKDGRLYGVEALARWSHAEFGEISPARFIPLAEECGLIGEL 742 Query: 335 TLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +R +G+W R +S+NL + +P+++ D + H + P+ + LE Sbjct: 743 GTWALREACRQLGEWRSRGIDVPAMSVNLSPTSFHNLDLPRMIADTLEHNALKPQDLTLE 802 Query: 394 LTEREFAD--PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 +TE D P T + + + + G + +DDFGTGYSSLSYL+ L V LK+D+SFV Sbjct: 803 ITESLLLDTNPGTMRTLQAVHSQ-GVRLSMDDFGTGYSSLSYLRRLPVSELKLDRSFVAD 861 Query: 452 LE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 LE + ++ I+ + ++L L +VAEG+ET+ Q LR+ G QG+L+S+ LP D Sbjct: 862 LENDEAAQALSNAILGIGRSLHLTVVAEGVETAAQNTILREQGYPVAQGYLFSRPLPAAD 921 Query: 508 FLRW 511 RW Sbjct: 922 LERW 925 >UniRef50_Q1IP01 Periplasmic sensor diguanylate phophodiesterase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP01_ACIBL Length = 506 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 142/274 (51%), Gaps = 11/274 (4%) Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 I GLVIGL V L + S ++ ++ + YQPI+ +G I+GAEA Sbjct: 233 IAAAFGLVIGLS----VYGNLTKYTSTAFLIEQGLKRNEFLPFYQPIIDSRDGSILGAEA 288 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLES 364 L RW G+ + P FIP A++ L +P+T + V +D+ + Q + +SIN + Sbjct: 289 LVRWQPKGGNLIPPGQFIPFAEENHLIDPITDQLEEKVLDDIKQFGWQDSSRFVSINAVA 348 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDD 423 +T L + ++ + ++E+TER +F D + EAG EI LDD Sbjct: 349 EQITDTPFCANLLRRLAEKRIPAKNFSVEITERHQFPDLDRGRAALQSLVEAGIEIKLDD 408 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPH------IIEMAKTLKLKMVAEGI 477 GTG+ SY+Q+L + LKIDK F+D L + P IIE AKT L +AEG+ Sbjct: 409 AGTGFGGFSYIQELPITTLKIDKMFIDTLRQEKQDPKRAVLQAIIEFAKTANLHAIAEGV 468 Query: 478 ETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 ET +Q L GV QG++YSK +P E+F+RW Sbjct: 469 ETKEQVSQLSAAGVFAIQGYVYSKPMPAEEFIRW 502 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 83/234 (35%), Positives = 135/234 (57%), Gaps = 4/234 (1%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE + +HYQP ++L+ G+++G EAL RW +SP SFIP+A+ +GL P+ Sbjct: 329 LRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSGLIVPI 388 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++ + W +S+NL + ++++ + + ++P + +E+ Sbjct: 389 GNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTGLDPHLLEIEI 448 Query: 395 TEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL-- 452 TE AD + + ++ G ++ +DDFGTG+SSL YL+ V+ LKID+SFV L Sbjct: 449 TESMTADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFVSELHN 508 Query: 453 --EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 + + + II MA+ L L +VAEGIET +Q +L+QH H GQG+L+SK LP Sbjct: 509 NPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLP 562 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 144/248 (58%), Gaps = 7/248 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 RRI S ++L+ AIE ++ + YQP+V + +G I+GAEAL RW + +G +SP FIPLA Sbjct: 815 RRI-SMEYKLRKAIEAQEFELFYQPLVHIQSGHILGAEALIRW-RCEGKLISPAEFIPLA 872 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQV 385 +++ L PL ++R+ W +S+N+ S + + LR+++ ++ Sbjct: 873 EESALILPLGDWVLRTAAHQAKLWQDAGHDLTMSVNISSRQFSGADLAVTLREVLLDTEL 932 Query: 386 NPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 P ++ E+TE D + + REAG +LDDFGTGYSSLSYL+ L +D LKI Sbjct: 933 RPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFFLDDFGTGYSSLSYLKRLPIDGLKI 992 Query: 445 DKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SF+ D + + + I+ MA+TL L++VAEG+ET Q L G QG+L S Sbjct: 993 DRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEGVETQAQRGLLASMGPIVLQGYLAS 1052 Query: 501 KALPKEDF 508 + +P +DF Sbjct: 1053 RPVPAQDF 1060 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 147/254 (57%), Gaps = 7/254 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 RIL R++ + L+ A+EN ++ +HYQP VSL +G+++GAEAL RW +SP FI Sbjct: 823 RILERLEL-ENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFI 881 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMIN 381 PLA++TGL P+ ++ + WL PQ +++N+ + E++ +L + Sbjct: 882 PLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALA 941 Query: 382 HYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 +++ P Q+ +E+TE +P+ + + + G I LDDFGTGY SL+YL+ +D Sbjct: 942 AHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPID 1001 Query: 441 ILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 +KID+ FV L E + I+ +A +L ++AEG+E Q ++LR+HG QG Sbjct: 1002 SIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQG 1061 Query: 497 WLYSKALPKEDFLR 510 +L+S+ LP +F R Sbjct: 1062 FLFSRPLPAAEFAR 1075 >UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Shewanella RepID=B1KIP0_SHEWM Length = 796 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/250 (35%), Positives = 149/250 (59%), Gaps = 7/250 (2%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 ++R + + RL AI DI ++YQPI+ LA+ KI+GAEAL RW ++ +SPD FIPL Sbjct: 533 IQRKLTLNVRLHQAISLDDIEIYYQPILDLASRKIIGAEALMRWTDSELGVVSPDEFIPL 592 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLT-SEKIPQLLRDMINHY 383 A++ GL L ++++ W P + ++IN S SE++ + +++ Sbjct: 593 AEKNGLIHKLGDIVLQRACSQAASWQSITPLK-MAINFSSVQFRYSEQLQARIVEVLAQT 651 Query: 384 QVNPRQIALELTEREFADPKTSAPIISRY-REAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 + ++ +E+TE D ++ + Y ++ G E+ +DDFGTGYS+LSYLQ L Sbjct: 652 GLPADKLDMEVTESLLIDQESGLMTMLAYLKQLGIEMSIDDFGTGYSALSYLQKFSFSKL 711 Query: 443 KIDKSFVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID++F++ + K + I+ MAK+L++K+VAEGIE +Q ++L+ HG +GQG+L Sbjct: 712 KIDRAFINKMASSKSDKALVTAILAMAKSLEMKVVAEGIEDEQQAQFLQSHGCEFGQGYL 771 Query: 499 YSKALPKEDF 508 +S+ + E F Sbjct: 772 FSRPVTAEAF 781 >UniRef50_A6CJY1 Sensory box/GGDEF family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CJY1_9BACI Length = 656 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 143/246 (58%), Gaps = 6/246 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L A+ N++ VHYQP+VSL K++G EAL RW + +SP FI +A++TGL P+ Sbjct: 399 LSKALLNQEFEVHYQPMVSLKEKKVIGFEALLRWNHPEKGMISPGEFIHIAEETGLIVPI 458 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +++ + + +W R + + ISINL + + I ++L +I ++P + +E Sbjct: 459 GEWVVKEACQQVHEWNRMLDKSYSISINLSLKQFSKKDIYEVLTGIIEDSGMSPSLVTIE 518 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV--- 449 +TE + + + + +++E G+ I +DDFGTGYSSLSYL+D + +KID+SF+ Sbjct: 519 ITESMAMTNTEHTLLTLKKFKENGYGISIDDFGTGYSSLSYLKDFSIKTIKIDRSFIKSV 578 Query: 450 -DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 D+ + + I+ +A L L++VAEG+E QE +L +Y QG+ YSK L D Sbjct: 579 NDSGKDDAIVKAILSIAGNLGLEVVAEGVELPHQEHFLLSQHCNYAQGYHYSKPLNSRDL 638 Query: 509 LRWAEQ 514 L + E+ Sbjct: 639 LSYLEK 644 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 133/244 (54%), Gaps = 8/244 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 H L+ A++N D + YQP + L G +VG EAL RW + P FIP+A+QTGL Sbjct: 538 HDLKQAVKNSDFTLVYQPKICLKQGNLVGFEALIRWNHKIRGAVGPTEFIPVAEQTGLII 597 Query: 333 PLTLLIIRSVFED---MGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 PL +I + E M D + +++NL + E + +RD IN + + P Q Sbjct: 598 PLGRWVITTACEQLRTMYDEEIVNDSVSMAVNLSAHQFQDEHLVDFIRDRINTFDIKPGQ 657 Query: 390 IALELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 +ELTE + +A + R+ G +I +DDFGTGYSSL YL+ L V+ +K+D+SF Sbjct: 658 FEIELTESVLMENFDNAIEKLEALRQLGIQISIDDFGTGYSSLGYLKRLPVNTVKVDRSF 717 Query: 449 VDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + +T +I MA L +VAEG+ET +Q ++L G YGQG+ +SK LP Sbjct: 718 VTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGVETEQQLQFLEHSGCDYGQGYFFSKPLP 777 Query: 505 KEDF 508 + Sbjct: 778 DHEL 781 >UniRef50_A4VKH7 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKH7_PSEU5 Length = 708 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/237 (37%), Positives = 139/237 (58%), Gaps = 9/237 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 ++ A+E + VHYQP V A +IVG EALARW D + PD F+P+A+++GL PL Sbjct: 458 MRTALERDEFAVHYQPKVD-AQRRIVGFEALARWTHADLGVIGPDRFVPVAEESGLIMPL 516 Query: 335 TLLIIRSVFEDMGDW--LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 TL ++R F D W RQ P +++NL + + + + + +++ ++P + L Sbjct: 517 TLAVLRRAFSDARRWNAGRQVPLL-VAVNLSPLLFLGDDVVERVMAVLDEVGLSPLLVEL 575 Query: 393 ELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE F D + I++ ++ G + +DDFGTGYS+L YL+ +DI+KID+S V Sbjct: 576 EITETVFLGDGSRAVSILADFKARGFRLAMDDFGTGYSALGYLRRFPLDIIKIDRSLVTG 635 Query: 452 LEYKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 LE ++ I I + K+L +VAEG+E + Q E+LR +G QG+L S+ LP Sbjct: 636 LEQEDEVAMIARAAISLGKSLHKTVVAEGVENAAQFEFLRHNGCDEFQGYLLSRPLP 692 >UniRef50_A0LUT2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LUT2_ACIC1 Length = 636 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 134/240 (55%), Gaps = 8/240 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E + +QPIV LA G VGAEAL RWP + P FIPLA+ +GL PL Sbjct: 386 LRAAVEAGAFRLDFQPIVELATGMWVGAEALLRWPHPTRGLVPPLDFIPLAEDSGLVVPL 445 Query: 335 TLLIIRSVFEDMGDWL-RQHPQQH--ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 ++R+ + W R H +Q +S+N+ L ++ D + V P + Sbjct: 446 GEWVLRTALQHRVAWTPRLHCRQDFCVSVNVSVRQLAEPGFVDVVTDALAASGVPPEVLV 505 Query: 392 LELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE F D + ++ R+ G I LDDFGTGYS+LSYL+ VDILK+D+SF+ Sbjct: 506 LEMTESVFIDEEAGTLAVLRALRDLGVRIALDDFGTGYSALSYLRRFPVDILKLDRSFIA 565 Query: 451 AL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 L + + VT +I +A+ L L +VAEGIET Q E LRQ G GQG+L K +P + Sbjct: 566 GLLGTAQDQAVTRAVIGLAQQLDLDLVAEGIETYDQLEILRQLGCRLGQGFLLQKPMPAD 625 >UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG75_THIDA Length = 954 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/256 (35%), Positives = 144/256 (56%), Gaps = 9/256 (3%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 R +RR+Q RL+ A ++R + VHYQP+V L G I GAEAL RW + + PD FI Sbjct: 683 RAMRRLQL-ESRLRRAFDDRTLQVHYQPLVRLDTGHICGAEALLRWNDPEAGAIPPDHFI 741 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ---HPQQHISINLESPVLTSEKIPQLLRDM 379 LA+ TGL P+ ++ E + W + + +NL L + +P L D Sbjct: 742 ALAEDTGLIVPIGEWVVGEACEALKRWETEILLPADFALHVNLSGKQLLQKDLPTRLSDA 801 Query: 380 INHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 V+P ++ LELTE + + T +++ RE G EI +DDFGTG+SSLS L+ L Sbjct: 802 FTRAGVSPARVVLELTESSIMESEATGVAVMTALREFGVEIAIDDFGTGHSSLSRLKLLP 861 Query: 439 VDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 + LKID+SF+ + + + I+ ++ L L ++AEG+E ++QE +L QHG Sbjct: 862 ISELKIDRSFIRDIAVDSDDAAIVQAILALSAKLGLGVIAEGVEHAEQEAFLMQHGCLRA 921 Query: 495 QGWLYSKALPKEDFLR 510 QG+ Y++ +P+++ +R Sbjct: 922 QGYRYARPMPEDELIR 937 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 7/259 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 +I R+Q +H L+ AI + +HYQP V L G+I+G EAL RW + + P+ FI Sbjct: 594 QINERMQMENH-LRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFI 652 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMIN 381 +A++ L PL ++ + W RQ + IS+N+ + L S + L+ +++ Sbjct: 653 RVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMM 712 Query: 382 HYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 +Q+ P + LE+TE DP+ + P + + G + +DDFGTGYSSLSYL+ L + Sbjct: 713 THQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLT 772 Query: 441 ILKIDKSFVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 LKID+SFV +E + I +A+TL L +VAEG+ET Q E+LR G QG Sbjct: 773 RLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQG 832 Query: 497 WLYSKALPKEDFLRWAEQH 515 + +SK LP + + + +H Sbjct: 833 YYFSKPLPANNIMAFVSRH 851 >UniRef50_B8H226 CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobacter vibrioides RepID=B8H226_CAUCN Length = 735 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/237 (38%), Positives = 135/237 (56%), Gaps = 10/237 (4%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+++ + V YQP V A GK++G EALARW + +SP +F+PLA+ GL + L Sbjct: 486 LRLALKDGGVWVAYQPQVD-AAGKVLGVEALARWTHPEKGAISPGAFVPLAEDCGLIDEL 544 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 LI+R F D W +++N+ + + P L+ ++ +I LE+ Sbjct: 545 GRLIMRRAFTDSLRW----KDLKVAVNVSALQMRQAGFPDLVAQILAETGARAEKIELEI 600 Query: 395 TEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL- 452 TE D + + ISR RE G + LDDFGTGYSSLSYL+ +D +KID+SF+ L Sbjct: 601 TEGALLGDDEATHDAISRLREMGFSLALDDFGTGYSSLSYLRRYPIDKIKIDRSFITPLG 660 Query: 453 ---EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 E V I+ +AK LKL ++AEG+ET++Q E L + G QG+L+S AL + Sbjct: 661 GDKEAGAVVAAIVRLAKALKLSVIAEGVETNQQREQLHEIGCVQAQGFLFSAALAAD 717 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 80/248 (32%), Positives = 146/248 (58%), Gaps = 4/248 (1%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 + ++ AIE ++YQP + +A + G EAL RW + + P+ FIP+A++TG+ Sbjct: 460 NEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMIL 519 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 L I++ + +W Q +S+NL + + + + ++++D++ +++P + L Sbjct: 520 ALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLEL 579 Query: 393 ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 E+TE F + + ++ + R+ G +I +DDFGTGYSS SY++ L VD +KID SF+ + Sbjct: 580 EITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDI 639 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 E + + I+ +A++L + ++AEGIE Q L+++G +GQG+L+SK LP +DF Sbjct: 640 HHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDF 699 Query: 509 LRWAEQHL 516 + Q L Sbjct: 700 DQLLRQEL 707 >UniRef50_A6TIB7 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae MGH 78578 RepID=A6TIB7_KLEP7 Length = 484 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 131/494 (26%), Positives = 235/494 (47%), Gaps = 45/494 (9%) Query: 37 FIEELDTYSSRVAIRANKVATQG---KDALQELERWQGAACSEAHLMEMRRVSYSYRYIQ 93 F +++ Y+S V +R+ + Q K A + + C+ +++ +R V + Y I+ Sbjct: 3 FRDKIKDYTSDVLVRSESLLVQTESVKTAAKSHLNIGDSPCTNENILHLRVVVWPYPLIK 62 Query: 94 EVAYIDNNVPQCSSLEHESPPDTFPEPGK---ISKDGYRVWLTSHNDLGIIRYMVAMGTA 150 +V YI CS+L P E S++G VWL I+ M + Sbjct: 63 DVGYIIKGELACSALWGSLRPTLSLEHFDKKWTSREG--VWLFG------IKLMDDISVN 114 Query: 151 HYV---VMIDPASFIDVIPYSSWQID------AAIIGNAHNVVITSSDEIAQGIITRLQK 201 Y+ +M+ + F+ + ++ D +A++GN+ + + ++ R Sbjct: 115 GYISEGIMVTLSPFV----FRRFETDMYSKNFSAVVGNSKHDRHYFNIGPDAPLLDRHDS 170 Query: 202 TPGEHIENNGIIYDILPLPEMNISIITWAS---TKMLQKGWHRQVFIWLPLGLVIGLLAA 258 P + + + ++ + T + + W Q+ + + + L+ GL+ Sbjct: 171 VP--------LRFRVFRACSLHYDLCVAGGGYFTGIFSEHWSIQMLL-VTVSLLSGLMIY 221 Query: 259 MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP 318 + ++ S R A++N + + YQPI + +G+I G EAL RW +SP Sbjct: 222 IIIMNRAELNSSLSARFVKALKNEALSLVYQPIYRIEDGQICGFEALLRWKDERLGNISP 281 Query: 319 DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRD 378 + FIPL+++ GL E +TL +I + Q+ + +S+N+ L SEK L Sbjct: 282 EVFIPLSEREGLQEDVTLFVINHAIREFIHTAIQN-EIFLSVNINPSDLDSEKFRDKLLG 340 Query: 379 MINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 +I+ Y + + I LE+TER+ D + I +Y+ G +DDFGTGYS+L+ + LD Sbjct: 341 LISEYNIPYKTILLEITERQGGDFEGMKIHIDKYKNHGVRFAIDDFGTGYSNLNLVTALD 400 Query: 439 VDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH-GVHY 493 VD +KIDKS A+ + ++ P + EM +++ K+V EG+ET +Q +L+ Y Sbjct: 401 VDEIKIDKSLTSAIGTESLRYDLLPGLHEMFRSIADKIVFEGVETQEQVNYLKTFWPQSY 460 Query: 494 GQGWLYSKALPKED 507 QGW YS+ALP E+ Sbjct: 461 AQGWYYSRALPLEE 474 >UniRef50_A3YDR3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with GAF sensor n=1 Tax=Marinomonas sp. MED121 RepID=A3YDR3_9GAMM Length = 531 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 145/245 (59%), Gaps = 6/245 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIEN + ++YQP V+ ++ +++GAE L RW ++ +++PD FI +A+++GL PL Sbjct: 274 LRQAIENYNFELYYQPKVNASDFRVMGAEVLIRWKHSELGFITPDRFISIAEESGLIIPL 333 Query: 335 TLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 IIR + + +W + H +SINL L + ++ ++ ++P+++ E Sbjct: 334 GEWIIRETCKQLMEWDKDNHHDLIVSINLSMKQLAHKDFIDMVMGILCETHIDPKRLEFE 393 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D + ++R ++ G I +DDFGTGYSSLSYL+ L + +KIDKSF+ + Sbjct: 394 ITETVLMCDVNEVSEKVNRLKDIGINISIDDFGTGYSSLSYLKKLPIQTIKIDKSFIRDI 453 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + K + I MA +L + ++AEG+E +Q LR G Y QG+ +SK + K++F Sbjct: 454 CSDDDDKAIVKATINMALSLNIDIIAEGVENIEQVNILRNFGCQYFQGYYFSKPIDKQNF 513 Query: 509 LRWAE 513 +++ E Sbjct: 514 IKYCE 518 >UniRef50_Q1Z8P6 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z8P6_PHOPR Length = 507 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 138/239 (57%), Gaps = 5/239 (2%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 ++N++ YQPI+ ++ ++VG E L RW + +G +SP+ FIP+A+ G LT Sbjct: 256 GLKNKEFIPFYQPIIDSSSKQVVGCEILVRWIKKNGEIISPNLFIPIAEYNGQIFELTYD 315 Query: 338 IIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 ++ V D+G + +HP ++S+N+ L + + + ++ ++ + IA E+TER Sbjct: 316 LLNQVSADIGKFALKHPDFYVSLNVVPEQLEDDNFAENVFKILKNHNIEANHIAFEVTER 375 Query: 398 E-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN 456 F + K + +I++ + +I LDD GTGY SYLQ+L +D LKIDK FV+ + + Sbjct: 376 TPFTNLKKAERVINQLKNQKIDIKLDDAGTGYGGFSYLQELPIDTLKIDKMFVETIGTND 435 Query: 457 VTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 V I+ K LKM+AEG+E+ +Q ++L G+ QG+ Y+K +P E+F R+ Sbjct: 436 VKSKILSSIILFGKNAGLKMIAEGVESQEQVDYLNLKGITLMQGYYYAKPMPFEEFTRY 494 >UniRef50_C1A5B4 Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B4_GEMAT Length = 966 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 131/240 (54%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE + + +QPIV L G I+GAEAL RW + + P FIP+A+ TGL P+ Sbjct: 700 LRRAIEREEFFLEFQPIVELDTGNIIGAEALVRWLCRERGTVPPGVFIPIAEVTGLIVPI 759 Query: 335 TLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R + W R+ I++NL L I +R + ++P Q+ LE Sbjct: 760 GKWVLRRACREAQRWTRERGIAARITVNLSGRQLQDAGIVDDVRQALEETGLDPTQLVLE 819 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE + S ++ +E G + +DDFGTGYSSLSYLQ +DILKIDK+FVD + Sbjct: 820 ITESMLMQNTDVSMARLTALKELGVSLAIDDFGTGYSSLSYLQRYPIDILKIDKAFVDVI 879 Query: 453 EYKNVTP----HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + P I+ + TL++ VAEGIET Q L G GQG+L+S L +E+F Sbjct: 880 DKGGEGPVLASAIVALGDTLRMNTVAEGIETEAQRGHLLTLGCELGQGFLFSPPLDEEEF 939 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 89/239 (37%), Positives = 134/239 (56%), Gaps = 5/239 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E + ++YQP V L +G+I+G EAL RW +SP FIP+A+Q+GL + Sbjct: 678 LRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIAEQSGLIIDI 737 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLES-PVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +++ W Q +S N+ + + S ++ Q LRD + V+P ++ +E Sbjct: 738 GNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALAESGVDPTRMEVE 797 Query: 394 LTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 LTE DP+ I+ R G ++ LDDFGTGYSSLSYL+ + ILKID+SFV A + Sbjct: 798 LTESLLLDPQGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILKIDRSFVSAAD 857 Query: 454 YK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + II MA L++ ++AEGIET+ Q + L G GQG+ YS +P +F Sbjct: 858 NNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHYSCPVPATEF 916 >UniRef50_C4TR37 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TR37_YERKR Length = 513 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 88/236 (37%), Positives = 139/236 (58%), Gaps = 5/236 (2%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 AIE RD + QP + +I+GAEAL RW Q DGS+ P FI ++++G PL Sbjct: 270 AIEKRDFVLFLQPQWDMEAPRIIGAEALLRWRQADGSYRLPSEFITDSEESGAMIPLGNW 329 Query: 338 IIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 ++ + DW + +++N+ L E I L+ +++ Y ++PRQ+ LE+TE Sbjct: 330 VLEESCGILADWKARGITLSLAVNISGLQLQCESILTHLQTILSRYDIDPRQLVLEITET 389 Query: 398 -EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY---LQDLDVDILKIDKSFVDALE 453 D + ++ + G I LDDFGTGYSSL Y L+ L ++I+K+DKSFV L Sbjct: 390 ARIQDLDKALMLLRELQGLGLSIALDDFGTGYSSLQYLNHLKSLPINIIKLDKSFVKYLP 449 Query: 454 YKNVTPHIIE-MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 +V II +++ LKL+++AEG+ET +Q +WL + G+ GQG+L+S+ L +E+F Sbjct: 450 EDDVMARIISTISEVLKLRVMAEGVETDEQRQWLLKQGIRCGQGFLFSEPLSREEF 505 >UniRef50_D0Z2V6 Rtn protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2V6_LISDA Length = 488 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 150/272 (55%), Gaps = 13/272 (4%) Query: 242 QVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVG 301 + I+L + I A+ +R + + +++AI N I + QPIV NG IVG Sbjct: 220 KTIIYLLVLAFISFGLALLAMRFITSLNWAKFEVENAIINNKIKPYVQPIVD-DNGDIVG 278 Query: 302 AEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISIN 361 E LARW + +G + P+ FIP +Q L P+TL ++ V E L + + H+S N Sbjct: 279 GEILARWIKDNGEIVPPNVFIPTIEQYDLMVPMTLSLLNQVIEYQS--LYHYKRLHLSFN 336 Query: 362 LESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIY 420 + P L KI ++ R + + V LELTE ++ T+ +++ R+ G + Sbjct: 337 VTEPCLNDPKIKRVCRSLSRYCDV-----VLELTENQQLVQTDTAQTMMASMRKFGVKFA 391 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVT----PHIIEMAKTLKLKMVAEG 476 LDD+GTGYS+L YL+ + D LKIDKSFVD + +V+ +II +A L ++++AEG Sbjct: 392 LDDYGTGYSTLDYLRKIKFDYLKIDKSFVDHITSDDVSNAIIDNIIALADRLNIRIIAEG 451 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 IE +Q E L+ GV Y QG+LY K + ++F Sbjct: 452 IEQPEQVEILKSRGVVYFQGYLYGKPMLLDEF 483 >UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRT2_9GAMM Length = 314 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 15/289 (5%) Query: 225 SIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++I A + M + R F + G+ I +R++ L+ AI++ + Sbjct: 25 ALIKHADSAMFRTKEKRDDFCFYERGMEA---------EIAKRLKL-EQELRKAIDSDQL 74 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP + G ++GAEAL RW +SPD FIPLA+++GL LT ++++V Sbjct: 75 VLHYQPQIDFKTGDLLGAEALVRWEHPLKGLVSPDDFIPLAEESGLINQLTDWVLKNVAV 134 Query: 345 DMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PK 403 WL + +++NL L E L D+I + P + LE+TE D P+ Sbjct: 135 QTKRWLDEGYSLRLAVNLSVKDLMQEDFHTKLEDLIKRSDLPPDVLELEITESTLMDHPE 194 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY----KNVTP 459 +++ ++ G + +DDFG+GYSSL+YL+ L VD+LKID+SF+ +E + Sbjct: 195 LMIKELNKIKKMGITVAVDDFGSGYSSLNYLKKLPVDVLKIDRSFISDIESDPNDSAIVA 254 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 II +AK L + VAEG+ET Q + L Q G QG+L SK +P + F Sbjct: 255 GIIALAKNLGMSTVAEGVETEAQRKILEQLGCDTFQGYLVSKPVPPQLF 303 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 143/250 (57%), Gaps = 9/250 (3%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 RIQS H+ AIE + + + +QP +L IVG E L RW + + P FIP+A+ Sbjct: 569 RIQSALHQ---AIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAE 625 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQV 385 +TGL + + ++ + WL Q + I++N+ + L Q L D++N Sbjct: 626 KTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGF 685 Query: 386 NPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 +++ LE+TE DP+ + +++ RE G EI LDDFGTGYSSLSYL+ L ++ LKI Sbjct: 686 PAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKI 745 Query: 445 DKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SFV + + + II M KTL LK+VAEGIET +Q ++L + G YGQG+L+S Sbjct: 746 DRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFS 805 Query: 501 KALPKEDFLR 510 + + E R Sbjct: 806 RPVSAEKLFR 815 >UniRef50_A3JQI8 Sensory box protein n=2 Tax=Rhodobacterales RepID=A3JQI8_9RHOB Length = 908 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/251 (38%), Positives = 137/251 (54%), Gaps = 19/251 (7%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ + VHYQPIV LA GKI AEAL RW + +SP FIP+A++ GL + Sbjct: 648 LRTALPGKQFAVHYQPIVELATGKIYKAEALLRWQHPERGPVSPADFIPVAEEAGLIHEI 707 Query: 335 TLLIIRSVFEDMGDWLRQ--HPQQHISINLESPVLTSEKIPQLLRDM----------INH 382 + ++ W R+ P+ IS+N+ SPV E R + +N Sbjct: 708 GDWVFHEAIRELAHW-RELFEPELQISVNV-SPVQFRESQGSDRRSLEGFKKNWLNALNG 765 Query: 383 YQVNPRQIALELTEREFADPKTS-APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDI 441 + + E+TE + + S + R+AG ++ LDDFGTGYSSLSYL+ D+D Sbjct: 766 LGLPGESVVFEITEGVLVNAEASVTEKLIAMRDAGVQVALDDFGTGYSSLSYLKKFDIDY 825 Query: 442 LKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGW 497 LKID+SFV D + + + II MA L LK++AEG+ET Q + L G Y QGW Sbjct: 826 LKIDQSFVQNLQDDTDNQALCEAIIVMAHKLGLKVIAEGVETEPQRDLLVGFGCDYAQGW 885 Query: 498 LYSKALPKEDF 508 LYSKA+P ++F Sbjct: 886 LYSKAVPADEF 896 >UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zymomonas mobilis RepID=C8WAS4_ZYMMN Length = 579 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 96/256 (37%), Positives = 144/256 (56%), Gaps = 8/256 (3%) Query: 264 ILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIP 323 +L++ S L+ AI+N D+ + YQPI+S N KIVG EALARW +SP FIP Sbjct: 317 VLQKRFSLETDLRRAIDNGDLHLVYQPILSPYNKKIVGFEALARWNHETLGPVSPAEFIP 376 Query: 324 LAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTSEKIPQLLRDMI 380 +A+++GL PL + S W +Q +S+N+ + L + + QL+ D+ Sbjct: 377 VAEESGLIVPLGRWALESSVHTQQQWDKQAGYTLPIRVSVNVSALQLMRDNLTQLITDIK 436 Query: 381 NHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDV 439 +N ++ LELTE P+ S +I+ E G +I +DDFGTGYSSLSYL+ + Sbjct: 437 KQTGINGERLTLELTESALMRYPEQSISVINTMHELGIKISMDDFGTGYSSLSYLKTFPI 496 Query: 440 DILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQ 495 D LKID+SFV L +T I MA TL +K + EGIET +Q++ + G Y Q Sbjct: 497 DHLKIDRSFVTNLAEDKTAIAITRAITSMASTLSIKTIVEGIETPEQKKIIMDLGCDYAQ 556 Query: 496 GWLYSKALPKEDFLRW 511 G+ +S+ LP ++ + + Sbjct: 557 GFYFSRPLPVDEAIAF 572 >UniRef50_A6G7D3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7D3_9DELT Length = 696 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/251 (37%), Positives = 140/251 (55%), Gaps = 8/251 (3%) Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 +L++AI + V+YQPIVSLA+ K+ G EAL RW + P FI LA++TGL P Sbjct: 444 QLREAIVRQQFEVYYQPIVSLASSKLTGFEALVRWNHPKRGIIGPIEFIALAEETGLIVP 503 Query: 334 LTLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 + +++ M W ++ + IS+NL L S + + ++ + P + Sbjct: 504 IGQFVLKQACTQMAAWHAKYDEAKDVSISVNLSGHQLNSPTLVAEIEAVLAETALPPSAV 563 Query: 391 ALELTEREFADPKTSAP-IISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE D TSA I+ R R+ G ++Y+DDFGTGYSSLSYL +D LKIDKSFV Sbjct: 564 KLELTESTLIDDPTSAQRILKRLRDRGIQLYIDDFGTGYSSLSYLHRFAIDGLKIDKSFV 623 Query: 450 DALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 D + + + P I+ +A L + +VAEG+ET Q + L QG+LYS+ +P+ Sbjct: 624 DMVGRDDRKAAIVPSIVGLAHNLGVGVVAEGVETRDQAQTLALLDCAEAQGYLYSRPVPQ 683 Query: 506 EDFLRWAEQHL 516 + + E+ + Sbjct: 684 DQAAKLIERKI 694 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 147/260 (56%), Gaps = 7/260 (2%) Query: 261 VLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 +LR +R+ + L+ AI+N ++ + +QP +S ++ GAEAL RW + W+ P Sbjct: 552 ILRSEKRLYI-ENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHPERGWVPPIE 610 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDM 379 FIP+A+ +G+ E + ++ W ++ P +SIN+ L ++ Sbjct: 611 FIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQLARANWSHRVQAT 670 Query: 380 INHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 I Y +NP +I LELTE +P+ S E G ++ +DDFGTGYSSLSYL+ ++ Sbjct: 671 ILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSLSYLKKIN 730 Query: 439 VDILKIDKSFVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 D++KID+SFV LE + + II MA +L L+++AEG+E Q + L G H Sbjct: 731 ADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLHDLGCHMI 790 Query: 495 QGWLYSKALPKEDFLRWAEQ 514 QG+LYSK LP+++F+ + ++ Sbjct: 791 QGYLYSKPLPEDEFVVFVQK 810 >UniRef50_A6W9D1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W9D1_KINRD Length = 692 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 138/245 (56%), Gaps = 13/245 (5%) Query: 275 LQDAIENRDICVHYQPIVSLAN---GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 LQ A+E R++ VHYQP+++L G VGAEAL RW + + PD FIP+A+ GL Sbjct: 430 LQRAVERRELAVHYQPVLALTGPRAGHAVGAEALLRWRSAELGPVGPDEFIPVAESAGLV 489 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQ----HISINLESPVLTSEKIPQLLRDMINHYQVNP 387 L ++ V D+ W R Q +++N+ + LT +P + ++ + + Sbjct: 490 NALGDWVLDRVMTDLAGW-RARGQVDDDFQVAVNVSAHQLT-PVLPGQVAGLLARHGLGA 547 Query: 388 RQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 R + LE+TE + T+ +++ R+ G + LDDFGTGYSSLS LQ+L D++K+D+S Sbjct: 548 RSVGLEVTETAVVEGGTAPQVLAELRDLGVSLLLDDFGTGYSSLSQLQELPFDVVKVDRS 607 Query: 448 FVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 FV + + + ++ +A+ L + +VAEG+E +Q E LR G QGW +++A+ Sbjct: 608 FVAGMTRSARDRALVLAVLNLAEALGMAVVAEGVEEREQAEQLRVAGCSAAQGWYFARAV 667 Query: 504 PKEDF 508 P + Sbjct: 668 PAAEL 672 >UniRef50_Q0HLF7 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q0HLF7_SHESM Length = 684 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 87/237 (36%), Positives = 139/237 (58%), Gaps = 4/237 (1%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L DA++N + +++QP + L GKI G EAL RW Q DG +SP SFIP+A++TG+ P+ Sbjct: 428 LHDALKNNEFLLYFQPKLDLQTGKITGCEALIRW-QKDGRLISPISFIPVAEETGIIIPI 486 Query: 335 TLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +I + +W +++ I+IN+ S + ++ M YQ+ P + +E Sbjct: 487 GRWVIEQSCRVLREWQKKYNFAIPIAINVASQQFADASLVSDIKQMALRYQIQPELLEIE 546 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D + + + + + AG I +DDFGTGYSSLSYL+ L + +KID+ FV L Sbjct: 547 ITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPITTMKIDRCFVSDL 606 Query: 453 -EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 E + I+ + K L L +VAEGIE +Q +WL+++ GQG+ +S+ LP+ +F Sbjct: 607 PEDSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQGFYFSQPLPQAEF 663 >UniRef50_C6C4X5 EAL domain protein n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4X5_DICDC Length = 524 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 147/523 (28%), Positives = 235/523 (44%), Gaps = 53/523 (10%) Query: 10 ISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERW 69 +SG+L+L +G + L+ Q+ S + T + +AN++ D +E++ Sbjct: 11 LSGMLLLGF---IGAVVLLSIAQLTMSLLSRASTET-----QANRIIKLSTDMAREIQTV 62 Query: 70 QGAA-------CSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESP-PDTFPEPG 121 C + ++R + + YI ++ + +N CS P P P Sbjct: 63 ATNVTNNHINNCQPDSINKLRTIIWDTSYINDIGIVQDNAIICSGAWGILPTPINIPNTT 122 Query: 122 KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH 181 KDG + I + + H V I + + +IP I N Sbjct: 123 IDYKDGLK---------KITDFNFPLMENHKV-NISLKNNVAIIP-------TQIPMNML 165 Query: 182 NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPL---------PEMNISI-ITWAS 231 + V+ SD +T L +T H + ILP E N+ I IT Sbjct: 166 DGVLDQSDIK----VTTLDETQVLHHNSFNAPTPILPFQTINYVRCDSEKNLCIRITHYG 221 Query: 232 TKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPI 291 + +FI LG + GL+ A+ I + +RL+ AI+N+ + V YQPI Sbjct: 222 AGISNLSATVIIFI-AALGFIFGLMIALLAYFISGWRNTISNRLKRAIKNKALYVEYQPI 280 Query: 292 VSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR 351 V L + IVGAEAL RW +SPD FI LA++ G++ +T L+I ++ L Sbjct: 281 VELKSRAIVGAEALVRWRDDIYGQVSPDLFIQLAEKLGITHEITKLVIDKSLDECQSILT 340 Query: 352 QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISR 411 IS NL S L S+ +++ + Y+++ QIA E+TE D + + I + Sbjct: 341 HSQDFFISFNLSSGDLCSKTFFTQIQENMKTYRIHAHQIAFEITEHINLDAELLSSQIKK 400 Query: 412 YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKT 467 GH I LDDFGTG S+LS L DL D +KIDK F+ L + ++ II M ++ Sbjct: 401 LMSMGHSISLDDFGTGSSNLSSLVDLQFDTVKIDKMFLHHLNNDKLWMDIIYSIIRMVES 460 Query: 468 LKLKMVAEGIETSKQEEWLRQHGVH-YGQGWLYSKALPKEDFL 509 ++V EGIE Q +++ ++ + YGQGWL+ KA+ E + Sbjct: 461 HHKRIVFEGIEEQYQSDFILKNTQNVYGQGWLFYKAMRNEQLI 503 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 89/246 (36%), Positives = 140/246 (56%), Gaps = 6/246 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A++ +HYQP VSLA+G++VGAEAL RW + +SP F+P+A+ GL + Sbjct: 748 LRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQI 807 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R WL + P +++NL + + +P+L+ +I + P Q+ LE Sbjct: 808 GEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELE 867 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV--- 449 LTE DP+++ ++ G + +DDFGTGYSSL YL+ V LKID+SFV Sbjct: 868 LTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDI 927 Query: 450 -DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 D + K + II +A +L + VAEG+ET Q ++LRQ G QG+ +S+ LP E F Sbjct: 928 GDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAF 987 Query: 509 LRWAEQ 514 + + ++ Sbjct: 988 VGYLQE 993 >UniRef50_Q04855 Uncharacterized protein AZC_3085 n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=Y3085_AZOC5 Length = 735 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 136/244 (55%), Gaps = 12/244 (4%) Query: 275 LQDAIENRD--ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 L+D I+ R + +HYQP+VS G +VG EAL RW +SP F+PLA+ G +E Sbjct: 479 LRDVIQRRTSALSLHYQPVVSARTGGLVGFEALVRWYSETHGPVSPALFVPLAEAGGFAE 538 Query: 333 PLTLLIIRSVFEDMGDW---LRQHPQQ--HISINLESPVLTSEKIPQLLRDMINHYQVNP 387 L +I + W R H HI+INL + + + + + +R + + + P Sbjct: 539 RLGAWVIETAISACAGWNVRRRAHGLAPWHIAINLSATEVVAPDLIERVRQTMAFHGLPP 598 Query: 388 RQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + + ELTE + P+ + +SR R G +DDFGTGYSSLSYLQ L +D+LKID+ Sbjct: 599 QCVCFELTESAILNQPEIAIETLSRLRALGCTTAIDDFGTGYSSLSYLQRLPMDVLKIDR 658 Query: 447 SF----VDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SF VD + + +IEMA L + +VAEG+ET+ + LRQ G QG+L+ +A Sbjct: 659 SFVLDMVDNSRSREIVRVMIEMAHGLGMSVVAEGVETTGALQILRQMGCDRAQGFLFGRA 718 Query: 503 LPKE 506 +P + Sbjct: 719 MPGD 722 >UniRef50_B5W1G7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Oscillatoriales RepID=B5W1G7_SPIMA Length = 366 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 87/240 (36%), Positives = 141/240 (58%), Gaps = 8/240 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIEN + ++YQPIV++ N +I G EAL RW + L+P FI +A+ TGL P+ Sbjct: 124 LRKAIENNQLVLYYQPIVNIKNQRIQGLEALVRWQHPERGLLAPGHFINIAENTGLIIPI 183 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHI--SINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 ++ + + + +W Q P + S+NL L + Q L +++N+Y + + L Sbjct: 184 GRWLLHTACQQLAEWENQFPHHFLKMSVNLSVKQLDIFLLEQ-LDEVLNNYNLKQNSLVL 242 Query: 393 ELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE A+ + + ++++ + G + +DDFGTGYSSLSYL L V+ LKID+SFV Sbjct: 243 EITESMLVANIEKTCDLLNQIKAKGIGLSIDDFGTGYSSLSYLHQLPVNSLKIDRSFVSP 302 Query: 452 LEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + + II ++K LKL ++AEG+ET +Q WL++ G QG+L+S+ +P D Sbjct: 303 ANLSDRHQVIAKSIIALSKLLKLHVIAEGVETPEQFHWLKKLGCEAAQGYLFSRPVPASD 362 >UniRef50_Q312J4 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q312J4_DESDG Length = 904 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 82/238 (34%), Positives = 139/238 (58%), Gaps = 8/238 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 ++ ++ + + YQP+ +G + G EAL RW + + PD FIPLA+++GL + Sbjct: 650 MRSGLQRDEFFMEYQPVQRSDDGTLTGFEALIRWRHPEKGIIGPDHFIPLAEESGLIVDI 709 Query: 335 TLLIIRSVFEDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 L +R +M W R++P + +++NL + + + + ++ ++PRQ+ Sbjct: 710 GLSALRKSCCEMARWCRRYPGCEELFLAVNLSARQFSQPDLVTCVSGILQDSGLDPRQLK 769 Query: 392 LELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE ++ +T+ ++ R ++ G ++ +DDFGTGYSSL+YLQ L VD LK+D+ FV Sbjct: 770 LEITESTIMSNAETALAMMHRLKQIGVQLAIDDFGTGYSSLAYLQKLPVDTLKVDRMFVS 829 Query: 451 ALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 A+E + + II +A +L+L VAEG+E S+Q E LR G Y QG+ + K LP Sbjct: 830 AMEEQAGCLEIVRSIIVLANSLQLNTVAEGVENSRQLEMLRNLGCSYVQGFYFHKPLP 887 >UniRef50_Q483U6 Response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483U6_COLP3 Length = 397 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 140/242 (57%), Gaps = 5/242 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++AI+ + + ++YQP +++ + GAE L RW + + PD FI LA+QTGL E L Sbjct: 152 LREAIDKKQLILYYQPQINMKTECLHGAEVLVRWLHPEFGLIYPDKFIALAEQTGLIEQL 211 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 + +I + W + + +SIN+ + +TS K+P+ LR ++ Y+++P I LEL Sbjct: 212 SEEVIHLAIKQSVHWQKLNRATRLSINISAQNITSLKLPEQLRMLVKKYEIDPSMIVLEL 271 Query: 395 TEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE D + TS I +R+R G ++ +DDFGTGYSSLS L + LKID+SFV ++ Sbjct: 272 TESALMDSEVTSLDIFTRFRLKGFQLSIDDFGTGYSSLSQLHKIPFTELKIDQSFVTNMK 331 Query: 454 YKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + + I+E +A L ++ VAEGIE + + L G QG+ ++ +P + F Sbjct: 332 QEKESMAIVETCIMLAHKLNMEAVAEGIEDKETWDLLSAEGCDIAQGYYIARPMPADQFD 391 Query: 510 RW 511 +W Sbjct: 392 KW 393 >UniRef50_Q1C186 Diguanylate cyclase/phosphodiesterase n=45 Tax=Enterobacteriaceae RepID=Q1C186_YERPA Length = 728 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 87/252 (34%), Positives = 144/252 (57%), Gaps = 11/252 (4%) Query: 268 IQSPHHRLQD------AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 I+ H RL AIEN D + QP + +++GAEAL RW Q DGS++ P F Sbjct: 465 IEKTHKRLTQENDLLQAIENHDFTLFLQPQWDMKRQQVIGAEALLRWCQPDGSYVLPSGF 524 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMIN 381 + A++ G+ PL ++ + DW + +S+N+ + +++ L+ +I+ Sbjct: 525 VHFAEEEGMMVPLGNWVLEEACRILADWKARGVSLPLSVNISGLQVQNKQFLPHLKTLIS 584 Query: 382 HYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY---LQDL 437 HY ++P+Q+ LE+TE + D + ++ + G I LDDFG GYSSL Y L+ L Sbjct: 585 HYHIDPQQLLLEITETAQIQDLDEALRLLRELQGLGLLIALDDFGIGYSSLRYLNHLKSL 644 Query: 438 DVDILKIDKSFVDALEYKNVTPHIIE-MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 + ++K+DKSFV L + II ++ LK++++AEG+ET +Q +WL +HG+ GQG Sbjct: 645 PIHMIKLDKSFVKNLPEDDAIARIISCVSDVLKVRVMAEGVETEEQRQWLLEHGIQCGQG 704 Query: 497 WLYSKALPKEDF 508 +L+S LP+ +F Sbjct: 705 FLFSPPLPRAEF 716 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 137/240 (57%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI + VHYQP +SL +G ++GAEAL RW + +SP FIP+A+++GL + Sbjct: 610 LRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQI 669 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R W + + I++NL + +P L+ ++ P+ + LE Sbjct: 670 GEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELE 729 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE DP+ + +++ E G + +DDFGTGYSSLSYL+ LKID+SFV + Sbjct: 730 LTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDI 789 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 E K + II MAK L L+ +AEG+ET++Q+ +LR+ G H QG+ YSK LP DF Sbjct: 790 STDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADF 849 >UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FHU8_9GAMM Length = 628 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 135/240 (56%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L DA++ ++ VHYQPI+ + +++GAEAL RW ++PD FI LA+Q G L Sbjct: 379 LADALDKHEMSVHYQPIICVKTQRVLGAEALIRWNNPILGAVAPDRFINLAEQNGQILAL 438 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R+ E W + I++N+ L + + + ++ +YQ+ + LE Sbjct: 439 GNFVLRTAMEQARHWRKSFGNDFSIAVNISPVQLRDDNLVSRIAQLLAYYQLPGSALELE 498 Query: 394 LTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D K A + ++ G I LDDFGTGYSSLSYLQ D LKID+SF+ L Sbjct: 499 ITEGVLLQDEKKVAKSLDGLQKLGVSISLDDFGTGYSSLSYLQKYSFDTLKIDRSFIMNL 558 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + K + II MAK L L++VAEG+ET +Q +++ + G +GQG+LY K +P F Sbjct: 559 MECDQDKELARAIIAMAKKLNLQVVAEGVETPEQHQFIVEEGCDFGQGYLYGKPVPATMF 618 >UniRef50_A6SZI8 Uncharacterized conserved protein n=3 Tax=Oxalobacteraceae RepID=A6SZI8_JANMA Length = 876 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 140/241 (58%), Gaps = 8/241 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E ++ V YQP V LA+G + G E L RW + +SP+ FIP+A+ +G+ P+ Sbjct: 620 LRFALERNELSVAYQPKVLLADGSVQGFELLLRWNSPEYGLISPNEFIPIAETSGMVVPI 679 Query: 335 TLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 + + + + W +Q+P+ ++IN+ L +RD++N V P+ + Sbjct: 680 GMWAMEQACKQLAAWQQQYPEMGSLTMAINVSMRQLLQTSFFSQVRDILNSSGVIPQMVE 739 Query: 392 LELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LELTE A+P + +S ++ G + LDDFGTGYSSL+YLQ L +DILKIDK+FV Sbjct: 740 LELTETSAMANPLQTMENLSMLKKLGVRLALDDFGTGYSSLAYLQKLPIDILKIDKAFVR 799 Query: 451 ALEYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + II +A+TL L+ AEG+ET +Q + L++ G + GQG+L+S L + Sbjct: 800 GIGSNQSDTEIIRLMMALAQTLNLQTTAEGVETFEQIQELKKMGCNLGQGFLFSAPLTAQ 859 Query: 507 D 507 + Sbjct: 860 E 860 >UniRef50_UPI0001C377AD response regulator/GGDEF domain/EAL domain-containing protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C377AD Length = 316 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 141/244 (57%), Gaps = 6/244 (2%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 AIE ++ + YQP + LA GKI+G EAL RW + DG+ +SPD F+P+A+ + L ++ Sbjct: 70 AIEKNELHLFYQPKIDLATGKIMGVEALIRWIKPDGTIISPDVFVPIAENSHLIGKISDF 129 Query: 338 IIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 ++ W + +P +SIN S + + + + ++ + + +ELTE Sbjct: 130 VLNEGCRQNKMWQKMGYPNIVMSINFASTDFYQTDLKDKVFEALAKSGLDAQWLEVELTE 189 Query: 397 R-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 +D + +++ RE G ++ +DDFGTGYSSLSYLQ L + +LK+D+SF+ +E+ Sbjct: 190 TLALSDVNFAISQMNKLRELGVKLAMDDFGTGYSSLSYLQTLPITLLKLDRSFITDIEHD 249 Query: 456 NVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 N+ I I +AK+ K++ +AEGIE QE LR G Y QG+LY K +P D ++ Sbjct: 250 NIAYEIVSAVIRIAKSKKIETIAEGIENQVQESILRMAGCDYAQGYLYGKPMPPSDIQKF 309 Query: 512 AEQH 515 E++ Sbjct: 310 FEEN 313 >UniRef50_C9Y8R2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8R2_9BURK Length = 558 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 134/246 (54%), Gaps = 5/246 (2%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + +L++A+ + +HYQP + L G++VGAEALARW + PD FIP+ + TGL Sbjct: 305 YEKLREAVLQNRLMLHYQPQLDLKTGRVVGAEALARWNDPQDGMIPPDKFIPIIESTGLL 364 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 ++ + D W + P +SINL + L ++ Q ++ + + + P + Sbjct: 365 RRFSVWTVARALADCTAWQTRLPGVSVSINLSADALHEPEVLQTVQRHLANSGLEPHLVI 424 Query: 392 LELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 +ELTE P+ + ++ + G ++ +DD+G G+SSL+YL+ L +KIDKSF+D Sbjct: 425 IELTESVLLKSPEDALARMASFMALGVQLSIDDYGAGFSSLTYLKQLPAQEMKIDKSFID 484 Query: 451 ALEYKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 L + I IE+ L LK++AEGIE LR+ G GQGWL+SKALP Sbjct: 485 NLAVGSKEQAIVFSSIELGHDLGLKVLAEGIEDEMTATLLREAGCDLGQGWLFSKALPLS 544 Query: 507 DFLRWA 512 F W+ Sbjct: 545 QFQTWS 550 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 164/297 (55%), Gaps = 17/297 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I A T M Q K + R F + + + L + ++ +R A+ + Sbjct: 690 TLIKNADTAMSQAKRYSRNTFHFFTEEMQVHLQRKLKIVNAMRH----------ALLRNE 739 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + VHYQP +S G I+GAEAL RW + +SP FIP+A+ +G + ++R+ Sbjct: 740 MQVHYQPQISAVKGHIIGAEALLRWRHPELGDISPGEFIPIAESSGQIVAIGEWVLRTAI 799 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFAD 401 + M W + +++NL + + ++ M+N Q+ + + LELTE D Sbjct: 800 DQMKVWQNEGLAPMVVAVNLSALQFKQANLIGMIISMLNKAQLAHQYLELELTEAITMDD 859 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 P+ + I+++ G + +DDFGTGYSSLSYL+ V LKID+SF+ L + + + Sbjct: 860 PQQAINIMNQLHAKGIRMSIDDFGTGYSSLSYLKQFKVYKLKIDQSFICNLARDSDDRAM 919 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II+MAK L ++ +AEG+ET++Q E+LR HG + QG+ +SKA+P ++F R+A+Q Sbjct: 920 VHAIIDMAKNLGMQTIAEGVETAEQLEFLRLHGCNEIQGYYFSKAIPADEFSRFAKQ 976 >UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Arthrospira RepID=B5VW83_SPIMA Length = 655 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 145/248 (58%), Gaps = 8/248 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE +++ +HYQPI+SL +I+G EAL RW W+SP FIP+A++TGL +P+ Sbjct: 365 LRHAIERQELQLHYQPIISLETLEIIGCEALIRWEHPKRGWVSPSQFIPIAEETGLIQPI 424 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 ++RS E + W PQ +S+NL + LT+ ++ ++ ++ +P ++ Sbjct: 425 GEWVLRSACETLHRWQLMFPQGKQPFMSVNLSTYQLTNPQLVNKVQTILEETGCDPCRLK 484 Query: 392 LELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LELTE A+ + P + E G ++ +DDFGTGYSSLS L + LKID+SF++ Sbjct: 485 LELTESTIAEYAEVVVPQMRELSELGIKLCIDDFGTGYSSLSRLYHFPIHTLKIDRSFIE 544 Query: 451 ALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 ++ + I+ +A TL L+++AEG+ET +Q L+ G QG+L+SKA+ + Sbjct: 545 GIDESQDQLKIAYAIVNLAHTLGLEVIAEGVETPEQMAVLQAWGCQLCQGYLFSKAVDDQ 604 Query: 507 DFLRWAEQ 514 ++ Q Sbjct: 605 KMEQFLSQ 612 >UniRef50_A6Q2C3 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2C3_NITSB Length = 765 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 145/257 (56%), Gaps = 8/257 (3%) Query: 263 RILRRIQSPHHRLQDAIENRD-ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 + L +Q L+ A++ D + + +QP + + N K++GAEAL RW L+P+ F Sbjct: 503 KYLDHLQQTTQDLRKALKKEDELTLFFQPKIDIQNNKVIGAEALIRWNHPQKGLLTPNVF 562 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI--SINLESPVLTSEKIPQLLRDM 379 IP+A+++ L E + +I+ F + +W Q+I S+N+ + + K L Sbjct: 563 IPVAERSDLIEKIDEFVIKKSFRHLQEWSSDKELQNIVLSLNISARQFRNPKFLDFLDKN 622 Query: 380 INHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 + Y ++P ++ LE+TE + + ++ ++ G ++ LDDFGTGYSSL+YL+ L Sbjct: 623 LKLYNIDPSKLELEITETLSMENVSHTVNMLEAIKQIGFQVALDDFGTGYSSLNYLKRLP 682 Query: 439 VDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 D +KIDKSF+D + E +T I ++A T + +++AEG+ET +QE L+ Y Sbjct: 683 FDTIKIDKSFIDDIDKDPEDYQITKIITDIAYTFRKEIIAEGVETKQQERILKDLKCFYA 742 Query: 495 QGWLYSKALPKEDFLRW 511 QG+LY+K LP +F + Sbjct: 743 QGYLYAKPLPLNEFKEF 759 >UniRef50_A9AD14 Signal transduction GGDEF/EAL domain protein n=47 Tax=Burkholderia RepID=A9AD14_BURM1 Length = 611 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 139/249 (55%), Gaps = 7/249 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L D + N + +H+QPI +G +VG EAL RW + P +FIPLA+ GL L Sbjct: 357 LYDGVRNGEFSLHFQPITRSQSGAVVGVEALIRWRHPVHGLVPPATFIPLAESIGLINYL 416 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++++ + W RQ Q++++N+ + Q +RD I ++PR+I LE Sbjct: 417 GNWVLKAACMQLVAWDRQGLALQYVAVNVSPQQFRDPRFTQSVRDAIALTGIDPRRIVLE 476 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE DP + ++ E G +DDFGTGYSSL+YLQ + LKID+SFV+ L Sbjct: 477 ITESLLMHDPAHAKGLLEELTELGIRFAIDDFGTGYSSLAYLQRFPLAKLKIDRSFVENL 536 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + ++ +A+TL+L++VAEG+ET Q L + G ++ QGWL +ALP E+ Sbjct: 537 LTSRNDRAIVSAVVGLAQTLELELVAEGVETEAQRALLTEMGCNHIQGWLVCQALPSEEL 596 Query: 509 L-RWAEQHL 516 R+A Q L Sbjct: 597 ARRFAAQQL 605 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 139/466 (29%), Positives = 219/466 (46%), Gaps = 41/466 (8%) Query: 66 LERWQGA---ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESP----PDTFP 118 L+R QGA C+E L + R++ Y + + ++ CSSL+ E P F Sbjct: 66 LDRSQGALGKPCAEV-LGRLTRMTMLSPYFRSLVLVERGNVYCSSLQGELKDLPLPVAFK 124 Query: 119 EPGKISKDGYRVWLTSHNDLGIIRYMVAM--GTAH---YVVMIDPASFIDVIPYSSWQID 173 G ++ G R+ ++ R V M G A+ + +ID +D+ +S+ Sbjct: 125 ALGSLAP-GQRITPSNATPQVPERASVIMSRGDANGSGVLAIIDGQYLLDIQQAASYDGR 183 Query: 174 AAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP-EMNISIITWAST 232 + +V+ S G + Q + G I P E+ +++ ++ Sbjct: 184 FQV-----QMVLRESQRQLPGGMPATQ-------DGGGAIAASARFPVEVRVAVAPALAS 231 Query: 233 KMLQKGW-HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPI 291 W H FI L ++ G LA +F R L + + A+ R+ + YQPI Sbjct: 232 AYRADAWRHYTPFIVLA-AMLAGYLAHLFCRRRLSLVGDMYR----AMRAREFHMVYQPI 286 Query: 292 VSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR 351 + L G+ G EAL RW + D S + PD F+PLA+ G+ LT I V D+ L Sbjct: 287 IRLDTGECRGVEALVRWRRPDNSQVRPDIFVPLAEDNGMIGDLTRHIFGLVAADLAQ-LG 345 Query: 352 QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAP--II 409 H+ +N+ L + +R ++ + Q+ LE+TERE A P+ + I Sbjct: 346 LGAGDHLGVNVSGSHLAGQGFVDDVRRLLGAIGSDGPQLVLEVTERE-ALPRDAQAQRNI 404 Query: 410 SRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIE----MA 465 + RE G + LDDFGTG SSLSYLQ L D LK+D+SFV + ++V ++E +A Sbjct: 405 RQLRELGVQWALDDFGTGQSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVVLETIIGLA 464 Query: 466 KTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + L L + AEGIET +QE++L H V +GQG+L+S L + W Sbjct: 465 QRLDLDVTAEGIETREQEQYLCGHSVQWGQGYLFSPPLTAAELGAW 510 >UniRef50_B5FFC2 Sensory box/ggdef family protein n=2 Tax=Vibrio fischeri RepID=B5FFC2_VIBFM Length = 845 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/251 (38%), Positives = 140/251 (55%), Gaps = 19/251 (7%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L AI+N ++ +YQP+V+ +GKI GAEAL RW +SP+ FIPLA+ G+ + Sbjct: 594 LSHAIKNEELLPYYQPLVNFEDGKIHGAEALIRWHSPQRGLISPNEFIPLAEDNGMIINI 653 Query: 335 TLLIIRSVFEDM------GDWLRQHPQQHI-SINLESPVLTSEKIPQLLRDMINHYQVNP 387 +++R D G+W P+ + +N+ + L Q L+D + + P Sbjct: 654 GRMVLRQACIDTAQKIASGEW----PEDFVMHVNVSTEQLHDGNSFQRLQDALIESSLKP 709 Query: 388 RQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + ++LE+ E R + ++++ R G I +DDFGTGYSSLSYL L D LKID+ Sbjct: 710 KNLSLEIIESRLLNNDIFIIELLNKVRALGVHIAIDDFGTGYSSLSYLHTLPFDCLKIDR 769 Query: 447 SFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFV +L +N +T II MAK + +VAEGIET +Q E LR G QG+LYSK Sbjct: 770 SFVKSLTRENADTSITSAIIHMAKGFNVSIVAEGIETKEQAEILRSLGCDIAQGYLYSKP 829 Query: 503 LPKEDFLRWAE 513 LP E +W E Sbjct: 830 LPIE---QWEE 837 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/237 (37%), Positives = 138/237 (58%), Gaps = 6/237 (2%) Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 +L+ A+E ++C+HYQP SL G+++G EAL RW + +SP FIPLA+++GL EP Sbjct: 581 QLRQAVERNELCLHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEP 640 Query: 334 LTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 + ++R W R IS+NL + + K+ +RD++ + P ++ L Sbjct: 641 IGEWVLREACRQGVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLEL 700 Query: 393 ELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV-D 450 ELTE A+P+ S +S R+ G + LDDFGTGYSSL+YLQ D++KID+SFV D Sbjct: 701 ELTETALIANPQQSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVAD 760 Query: 451 ALEYKN---VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 A+ + +I MA+ L + +AEG ET++ +L ++G QG+ S+ LP Sbjct: 761 AIRNPGNAAIVRTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLP 817 >UniRef50_B0G733 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G733_9FIRM Length = 591 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/265 (33%), Positives = 152/265 (57%), Gaps = 12/265 (4%) Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDA---IENRDICVHYQPIVSLANGKIVGAEALARWP 309 IG F + ++I+ L+DA +EN + + QP ++A G++V EALARW Sbjct: 156 IGNRICYFESGMAKKIELKQRILRDARHGLENHEFIFYLQPKCNMATGELVSMEALARWQ 215 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLT 368 ++DG+++SP+ FIPL + +G + I +SV + + W + + ISIN+ +T Sbjct: 216 KSDGTFVSPEEFIPLFESSGFITRFDMYIWKSVCKTLAAWQDKGCKLVPISINVSMIDIT 275 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAP-IISRYREAGHEIYLDDFGTG 427 + +PQ L + Y ++P + +E+TE FA+ T I+R+ + G + +DDFG+G Sbjct: 276 NIDVPQYLSMLTEQYHISPEYLPVEITESVFAESNTIVKNTITRFHKKGFYVLMDDFGSG 335 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALEYKN------VTPHIIEMAKTLKLKMVAEGIETSK 481 YSSL+ L+D +VD LK+D F+ ++ KN + I++MA L L ++AEG+ET + Sbjct: 336 YSSLNVLKDANVDYLKLDMKFM-QIDAKNKGKGIQILKSIVDMAYRLGLVIIAEGVETKE 394 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKE 506 Q E L+ +YGQG+ + + + E Sbjct: 395 QSEILKSMNCNYGQGFYFHRPMSVE 419 >UniRef50_Q5P356 Phospholipase A2 family protein n=2 Tax=Rhodocyclaceae RepID=Q5P356_AZOSE Length = 626 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 5/242 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI+ ++ ++ QP VS+++G++ GAEAL RWP ++ FI LA++ GL PL Sbjct: 364 LRSAIDKNELQLYCQPKVSISSGEVCGAEALVRWPHAQHGMIATGEFITLAERAGLIMPL 423 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 T ++ + F W Q +Q +S+NL + L ++ + + + + P I EL Sbjct: 424 TRWVLETAFRQSHTWFEQDIRQPLSVNLSAQDLRDPRLVDRISGLFATWAMPPEMIQFEL 483 Query: 395 TEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE DP + + R + G E+++DDFGTGYSSLSYLQ L VD LKID+SFV ++ Sbjct: 484 TESALMEDPIGALKTLQRLKALGVELFIDDFGTGYSSLSYLQKLPVDSLKIDQSFVSSML 543 Query: 454 YKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + I +E+ L L +VAEG+E+ Q + LR G QG +P E F Sbjct: 544 TNAGSAVIVRSTVELGHNLGLGVVAEGVESEAQWDGLRALGCDTAQGHFVGFPIPTEQFA 603 Query: 510 RW 511 W Sbjct: 604 DW 605 >UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SFB8_9CAUL Length = 726 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/239 (40%), Positives = 134/239 (56%), Gaps = 10/239 (4%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++AI I V YQP V NG+IVG EALARW +SP F+PLA++ GL L Sbjct: 468 LREAIHVEAIEVVYQPQVD-HNGRIVGVEALARWSHPQRGPISPAYFVPLAEECGLMMDL 526 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 LI+R D W P ++IN+ + L S + L+DM+ V PR I +E+ Sbjct: 527 GTLIMRRALIDSKRW----PGLKVAINVSATQLRSSRFLPELKDMLRETGVEPRSIEIEI 582 Query: 395 TEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL- 452 TE D + + ++ R+ G I LDDFGTGYSSLSYL VD +KID+SFV L Sbjct: 583 TEGMLLNDDQPTQNTLNALRQMGFSIALDDFGTGYSSLSYLSRYPVDKIKIDRSFVSNLG 642 Query: 453 ---EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + + II++AK L L ++AEG+ET Q LRQ G QG+L+SK + + + Sbjct: 643 VDPDAEALIRAIIKLAKALHLSILAEGVETKAQSHILRQAGCAIIQGYLFSKPVDRSEI 701 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 140/248 (56%), Gaps = 8/248 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI+ ++ +HYQP+VSL G+I+GAEAL RW D + PDSFI +A++ GL EP+ Sbjct: 815 LRQAIKRQEFVLHYQPVVSLDTGEIIGAEALIRWQHPDKGLIYPDSFIEIAEEAGLIEPI 874 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVL--TSEK-IPQLLRDMINHYQVNPRQIA 391 +I D+ W + +++N+ S TS+ I +++ + ++P + Sbjct: 875 GQWVIEQACTDLRYWHDLGLKIQVAVNVSSRQCKQTSQTPIKDIIKKALKVNNISPSSLK 934 Query: 392 LELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF-- 448 +E+TE D + + R G IY+DDFGTGYSSLSYL+ +D++KID+SF Sbjct: 935 VEITESSLMDNSEEMMTTLQDIRSLGVAIYMDDFGTGYSSLSYLKHFPIDVMKIDRSFIA 994 Query: 449 --VDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 +D ++ ++ + +L LK+V EGIET + ++LR G YGQG+ SK + + Sbjct: 995 GSIDDKTDASLVEAVVLIGHSLSLKLVGEGIETKQHYDYLRSLGCDYGQGYFISKPIASK 1054 Query: 507 DFLRWAEQ 514 + +Q Sbjct: 1055 ALITLCQQ 1062 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 6/240 (2%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 + L+DA++N+ ++YQP V + KIVG EAL RW + PD FIPLA++TGL Sbjct: 638 NNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLII 697 Query: 333 PLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 PL II + + +W + + I+IN+ + L + L +N P I Sbjct: 698 PLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNKNNCQPDWIE 757 Query: 392 LELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 +E+TE +P+ + ++S+ R G I +DDFGTGYSSL+YL+ L + +KID+SFV Sbjct: 758 IEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVS 817 Query: 451 AL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 L + +T II M+++L L ++AEGIET +Q+ ++ Q G QG+ YS+ L K+ Sbjct: 818 NLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPLTKK 877 >UniRef50_Q3J123 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rhodobacter sphaeroides RepID=Q3J123_RHOS4 Length = 789 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/238 (36%), Positives = 139/238 (58%), Gaps = 9/238 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANG--KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 L++AI + ++++P+VSL +IVG EAL RW L+P +FIP A++TG Sbjct: 521 QELREAIRRDEFRIYFEPMVSLGETGLEIVGQEALIRWEHPQRGLLAPIAFIPFAEETGF 580 Query: 331 SEPLTLLIIRSVFEDMGDWLRQHPQQH--ISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 + ++R+ +++ W ++H +SIN+ S SE+ Q++R++++ V+P Sbjct: 581 IRDIDRWVLRAAAQELARWAEDPARRHLGVSINISSAQFLSEEFGQMVREVLDETGVDPT 640 Query: 389 QIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 +I LE+TE ++ + + R G I LDDFGTG+SSLSYL+DL VD+LKID+S Sbjct: 641 RIELEVTEGTLLSNLGLARTTMMDLRSLGISIALDDFGTGFSSLSYLRDLPVDVLKIDRS 700 Query: 448 FV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 F+ D+ + + II +A L + +VAEG+ET Q WLR G QG+L+ + Sbjct: 701 FLGGLSDSKANRTILEGIIGLASGLGVALVAEGVETPAQFAWLRAKGCRTFQGYLFGR 758 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 6/244 (2%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 + L+ A+E + +HYQP V L + KI+GAEA+ RW + LSP FIPLA++TGL Sbjct: 865 NNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLII 924 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 + I+R +W + Q +++NL + E + Q + D + + P + Sbjct: 925 DIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLE 984 Query: 392 LELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV- 449 LE+TE + + + ++ + + G + +DDFGTGYSS YL+ +D LKID+SFV Sbjct: 985 LEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVR 1044 Query: 450 ---DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 D ++ +T II MA +L++K+VAEG+ET +Q +L++ G QG+L+S+ L Sbjct: 1045 DIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSH 1104 Query: 507 DFLR 510 DF+R Sbjct: 1105 DFVR 1108 >UniRef50_A4C9D0 Putative Sensory box protein n=2 Tax=Proteobacteria RepID=A4C9D0_9GAMM Length = 1503 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/251 (35%), Positives = 141/251 (56%), Gaps = 9/251 (3%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 +I R++Q + L++A++ +YQPI+S + + G E L RW Q D +SP FI Sbjct: 1241 KIQRKVQ-LENELKEAVKLNQFVNYYQPIISATDFTLKGFEVLLRWRQ-DNKLISPAEFI 1298 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINH 382 P+A+ GL LT + +D+ WL P ++S+NL + E I + L D+I Sbjct: 1299 PVAESMGLITTLTFAALTRAMQDLKAWLVSKPDCYVSVNLSARDFEHETIGEKLTDIILQ 1358 Query: 383 YQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDI 441 ++P Q+ E+TE D + + + ++ G IY+DDFGTGYSSLSYL+ +D+ Sbjct: 1359 ADISPTQVVFEITESALMQDSQKALEAMLILKQKGCRIYMDDFGTGYSSLSYLKRFPIDV 1418 Query: 442 LKIDKSFV-----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 LKID+SFV DA + + + + +A +L VAEG+ET Q E+L+ G Y QG Sbjct: 1419 LKIDQSFVADIGQDASD-EAIIHSTLALAHSLGKSCVAEGVETKAQVEFLQMLGCDYLQG 1477 Query: 497 WLYSKALPKED 507 +L+SK +P + Sbjct: 1478 YLFSKPVPSNE 1488 >UniRef50_A4C790 Predicted signal transduction protein containing sensor and EAL domains n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C790_9GAMM Length = 848 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/248 (37%), Positives = 138/248 (55%), Gaps = 6/248 (2%) Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 +LQ AI N ++ +++QP + LA I G+E L RW + ++ PD FI +A+ TG+ Sbjct: 592 QLQQAIRNNELELYHQPQIHLATNTIAGSEVLLRWNHPEFGFVPPDKFIRIAEDTGVINE 651 Query: 334 LTLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 LTL +I S F+ + + + Q H +SIN+ ++ + + QV P I L Sbjct: 652 LTLWVINSAFKHLNELINQGISNHKVSINISGKDISMRGFLNKISMALEVSQVPPELINL 711 Query: 393 ELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 ELTE +D K + ++ + G + +DD+GTGYSSL+Y+ L + LKIDKSFV Sbjct: 712 ELTESVMVSDFKILSELMKAFANMGINVSVDDYGTGYSSLAYISQLPFNELKIDKSFVLN 771 Query: 452 LEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 L + + IEMAK L L +VAEG+ETS E+ LR G QG+ YSK LP + Sbjct: 772 LSESPRNYTIVKNTIEMAKNLHLCVVAEGVETSAVEQKLRDCGCDIVQGYYYSKPLPFSE 831 Query: 508 FLRWAEQH 515 +L W ++ Sbjct: 832 YLIWLRKY 839 >UniRef50_C8WQF9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQF9_ALIAD Length = 785 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 85/239 (35%), Positives = 140/239 (58%), Gaps = 5/239 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A++N ++ +HYQP + + ++VGAEAL RW + + P +FIP+A+ + L P+ Sbjct: 182 LRQALQNGELEIHYQPKIHTRSMQVVGAEALCRWTHPELGHIPPQAFIPVAESSDLILPI 241 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++RSV + W++Q + IS+N+ + P+L+R + ++P+ I LE+ Sbjct: 242 DEYVLRSVCQQGASWMKQGYRVRISVNISGRQFMQDGFPKLVRACLAQTGMDPQLIELEI 301 Query: 395 TER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TER D + + ++ R+ G I LDDFG GYSSL+YL V LKID++F ++ Sbjct: 302 TERTAMCDVERAVHVLQELRKIGVRIALDDFGVGYSSLNYLIQFPVHTLKIDRTFTAGIQ 361 Query: 454 YK-NVTP---HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 N TP II +AK+L L +VAEG+ET +Q ++LR++ QG+L+ +P F Sbjct: 362 SAVNQTPIIGAIISLAKSLNLSVVAEGVETFQQFDFLRENRCDEIQGFLFGAPVPPTSF 420 >UniRef50_A2SJS2 Sensory box/response regulator n=3 Tax=Bacteria RepID=A2SJS2_METPP Length = 754 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/246 (38%), Positives = 137/246 (55%), Gaps = 7/246 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L AIE ++ +HYQP + + ++VGAEAL RW + +G + P FIPLA++TGL P+ Sbjct: 471 LHKAIEREELVLHYQPKIDVRTARMVGAEALMRW-KRNGVLVPPGDFIPLAEETGLIVPM 529 Query: 335 TLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 + IR W + H I++NL S + + ++ + V I LE Sbjct: 530 SEWAIREATRQARLWQQHHGIDTSIAVNLPSRLFERTDLVTHIQQAAAAHGVTHSCIELE 589 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD-- 450 +TE D + P + R E G EI +DDFGTGYSSL+YL L + LKID+SFV Sbjct: 590 ITETGLMKDLQNVIPALHRLNEIGVEISIDDFGTGYSSLAYLTTLPISELKIDRSFVRDL 649 Query: 451 --ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 L+ V II +A++L ++++AEG+E +Q E L + G QG+L+SKALP ED Sbjct: 650 GVTLQSSAVVTAIIALARSLGIRVIAEGVENLRQMEVLHRLGCSTMQGFLFSKALPPEDL 709 Query: 509 LRWAEQ 514 +W Q Sbjct: 710 EQWLAQ 715 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/247 (36%), Positives = 140/247 (56%), Gaps = 6/247 (2%) Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 RL AI ++ V YQP +S+ +I+GAEAL RW + + P FI +A++TGL + Sbjct: 832 RLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQN 891 Query: 334 LTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 + ++ DWL QH P ++++NL L + QL+ ++++ + L Sbjct: 892 IGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLEL 951 Query: 393 ELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 ELTE + + + I+ R+ G I +DDFGTGYSSL+YL+ +D+LKIDK FV+ Sbjct: 952 ELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVED 1011 Query: 452 LEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + ++ + I+ M +L+L ++AEG+ET Q E+L Q G Y QG+LYS LP E+ Sbjct: 1012 IPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEE 1071 Query: 508 FLRWAEQ 514 F + Q Sbjct: 1072 FAQLLSQ 1078 >UniRef50_C3RI80 Putative uncharacterized protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RI80_9MOLU Length = 1227 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 137/241 (56%), Gaps = 7/241 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 Q+AIEN + + QP ++ GKIVGAEAL RW + P+ FIP+ ++ GL + Sbjct: 414 FQNAIENNEFTFYAQPKCNIQTGKIVGAEALVRWQHPKKGIIPPNEFIPILEKNGLIGKM 473 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 I V++ + W+ H IS+N+ + + + + +D++N YQ+N I +E Sbjct: 474 DYYIWDCVYKHLRKWIDNGHKAIPISVNVSRIDMFTLDVVKCFKDLVNKYQINHNLIEIE 533 Query: 394 LTEREFADPKTSAP-IISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE + + II R+ G + +DDFG+GYSSL+ L+D++VD+LKID +F++ Sbjct: 534 ITESAYVEEYDKVKTIIKELRQEGFLVSMDDFGSGYSSLNMLKDINVDVLKIDMNFLNMN 593 Query: 453 EYKN-----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 E + + II MAK + L+++AEGIE+S+Q E L G Y QG+ + K + + Sbjct: 594 EQSSDKGIGILEAIINMAKLMGLRVIAEGIESSQQVELLLDLGCLYAQGYYFYKPMTSKQ 653 Query: 508 F 508 F Sbjct: 654 F 654 >UniRef50_A3WM41 Signaling protein with a ligand binding sensor domain, GGDEF and EAL domains n=2 Tax=Idiomarina RepID=A3WM41_9GAMM Length = 741 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 140/240 (58%), Gaps = 6/240 (2%) Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 +L+ A+E + V+YQP V L +I G EAL RW + DG+ + PD FIP+A+ TGL P Sbjct: 484 QLRHAVEQEALEVYYQPKVELLGHRITGLEALVRWVKDDGTVIGPDQFIPIAEDTGLIIP 543 Query: 334 LTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 L+ ++R+ + W ++IN+ L + + D ++ +++P+ I L Sbjct: 544 LSEYVMRTACNQLKRWHEMGFNDLTMAINISGKQLHLPDLVDTIVDNVSEARLSPKCIEL 603 Query: 393 ELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV-- 449 ELTE+ F + ++ + RE G + +DDFG GYSSLSYL++ V LKID+SFV Sbjct: 604 ELTEQVFIENIQSHTNFMHSVREHGMSLAIDDFGVGYSSLSYLKNFPVTSLKIDRSFVRD 663 Query: 450 --DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 D + + II +AK L +++VAEGIETS+Q E+L GQG+L+S+ +P ++ Sbjct: 664 LPDNEDDAVIVQTIINLAKNLNIQLVAEGIETSEQVEFLLSRDCGIGQGYLFSRPVPADE 723 >UniRef50_A6AUF8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=7 Tax=Vibrio RepID=A6AUF8_VIBHA Length = 489 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 147/258 (56%), Gaps = 10/258 (3%) Query: 255 LLAAMFVLRILRRIQSPHHR----LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 LL F++ ++RR P L+ AI R++ ++YQP V GK+ G EAL RWP Sbjct: 225 LLVFYFLIFLVRRFIDPQRNMVSELKKAIRKRELKLYYQPQVDAQTGKVFGYEALVRWPH 284 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSE 370 ++SPD F+P+A+++GL E LT ++ ED + P H+ +N+ L+ Sbjct: 285 KLRGFISPDEFVPVAEESGLVESLTDFVLDKACEDFSKVKLEEP-IHLGVNVPPGYLSDS 343 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + + + ++ + + ++ +E+TER+ D + I+ R G ++ +DDFGTG ++ Sbjct: 344 HVIRKIENIHRTLKQHNVELGIEITERQLID-SNAIQHIAALRVHGIQVLIDDFGTGQTA 402 Query: 431 LSYLQDLDVDILKIDKSFVDALEYKNVTPH----IIEMAKTLKLKMVAEGIETSKQEEWL 486 L+ LQ + VD LKIDK FVD + ++V I+ +A L +++VAEG+ET +Q + L Sbjct: 403 LAVLQHMKVDYLKIDKCFVDTIGIESVNSSVLHAIVRLAGDLSVELVAEGVETKEQADHL 462 Query: 487 RQHGVHYGQGWLYSKALP 504 + GV+ QG+ Y+K LP Sbjct: 463 KALGVNIHQGYFYAKPLP 480 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 11/261 (4%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 R+ RR+Q+ L+ AIE+ D+ +HYQP + A+G++ G EAL RW + L PD F+ Sbjct: 831 RVTRRLQT-EAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFV 889 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMIN 381 P A+Q+GL PL ++R W P +++N+ + + ++ Sbjct: 890 PFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLG 949 Query: 382 HYQVNPRQIALELTEREFADPKTSAPIISRYRE---AGHEIYLDDFGTGYSSLSYLQDLD 438 +P +I LE+TE D + +++ + + G + LDDFGTGYSSLSYL+ L Sbjct: 950 ETGADPARIELEITESALMD--ATPELVASFDQLVALGLTLALDDFGTGYSSLSYLKRLP 1007 Query: 439 VDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 + LKID+SFVD L E +T + +A+ L +++VAEG+ET Q +L + G Sbjct: 1008 LRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAM 1067 Query: 495 QGWLYSKALPKEDFLRWAEQH 515 QG+L+S+ L E+F W E+ Sbjct: 1068 QGYLFSRPLGVEEFGTWFEEQ 1088 >UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH18_SHEPW Length = 1073 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 146/260 (56%), Gaps = 9/260 (3%) Query: 262 LRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 + +L R+Q RL+ A++ + + YQP+V + +G + EAL RW + +SP F Sbjct: 797 VEMLERMQ-LEQRLRKAVKKSEFYLEYQPVVDMTHGTVSSVEALIRWRDPEFGIISPALF 855 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLES-PVLTSEKIP--QLLRD 378 IP+A++TGL EPL ++ D+ W Q I+IN+ + S + Q+L + Sbjct: 856 IPIAEETGLIEPLGEWVLNQALADLSSWHAQGHMLKIAINVSGRQCINSNGLSFYQVLEE 915 Query: 379 MINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDL 437 + +++ + +E+TE + K S I+ R G +IYLDDFGTGYS+LSYL Sbjct: 916 ALLRHKIAAHYVHIEITESLLIEDKPYSLEILQSIRNLGVDIYLDDFGTGYSALSYLNQF 975 Query: 438 DVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHY 493 + ++KIDKSF+D + I+ M ++L++ +VAEGIET +Q ++L+ G +Y Sbjct: 976 PISVIKIDKSFIDNATVSQSDAKLVKAIVMMGQSLEMTLVAEGIETEEQWDFLQSLGCNY 1035 Query: 494 GQGWLYSKALPKEDFLRWAE 513 QG+L SK L E+ L + E Sbjct: 1036 AQGYLMSKPLSSENLLTFLE 1055 >UniRef50_B6BJN9 Sensory box sensor/ggdef/eal domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BJN9_9PROT Length = 642 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/255 (35%), Positives = 144/255 (56%), Gaps = 18/255 (7%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 +Q A + + ++YQP V + KIVGAEAL RW + + PD FIP+++ TG L Sbjct: 393 MQRAFYDNEFKLYYQPKVDAKSKKIVGAEALLRWIHHEKGLIGPDVFIPISESTGFMLSL 452 Query: 335 TLLIIRSV------FEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 +I+ F D+G + +SIN+ + + + Q L++ ++ V+P+ Sbjct: 453 GKFVIQESSLAIRRFSDLG-----YNGLKVSINISTRQFQNTDLYQDLKEELSKNDVDPK 507 Query: 389 QIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 Q+ +E+TE K + + + G IY+DDFGTGYSSLSYL+ +D LKIDKS Sbjct: 508 QLGIEITESIMMQHIKKTLTTLQEIKNLGVSIYIDDFGTGYSSLSYLKKFPIDTLKIDKS 567 Query: 448 FVDAL-EYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 FVD + E N + I+ M K+L L +VAEG+E Q +L++HG QG+ ++K Sbjct: 568 FVDDISEVGNNDEILLNTILAMGKSLGLDVVAEGVEHEYQYSYLKEHGCEIIQGYYFAKP 627 Query: 503 LPKEDFLRWA-EQHL 516 +P+E+F++ E+HL Sbjct: 628 MPEEEFIKLLHEEHL 642 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 143/245 (58%), Gaps = 8/245 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++AIE ++ + +QP V+L GAE L RW + + ++SP FIPLA++TGL + L Sbjct: 466 LREAIERNELSLAFQPKVNLKTRDYTGAEVLLRWYRPEQGFISPAEFIPLAEETGLIKEL 525 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHI--SINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 + ++R + + +W R P HI +INL + L +++ + +++ + V PRQ+ Sbjct: 526 GMWVVRRACQQLSEW-RGTPLSHIRLAINLSAIQLEDKELVHKIDNLLREFDVPPRQLEF 584 Query: 393 ELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 ELTE F + +++ ++ + G + +DDFG GYSSL+YL+ + +KID+SFV Sbjct: 585 ELTEEVFIQNIESNMAHLNELIKMGFRLSIDDFGVGYSSLAYLKHFPISCIKIDRSFVSQ 644 Query: 452 LEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 LE + + +I MA L L +VAEG+ET Q +L++ G QG+L++K LP + Sbjct: 645 LETNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAYLQKQGCDEAQGYLFAKPLPPDQ 704 Query: 508 FLRWA 512 + A Sbjct: 705 LYKLA 709 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 140/535 (26%), Positives = 244/535 (45%), Gaps = 70/535 (13%) Query: 14 LILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIR-ANKVATQGKDALQELERWQGA 72 L+LS+ +P+G+ I LA V T +++ + S + +R ++ ++ A ++ Sbjct: 8 LMLSIFIPLGIMISLAFV-VSTLILKQDISISGKTLLRFSSDMSAVSWRATKKAALLVNR 66 Query: 73 ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCS--SLEHESP---------PDTFPEPG 121 C + L + R YI+++ ++N CS S E P P PE Sbjct: 67 RCPD-MLDALTRTRAFTPYIRDIGVLENGEMTCSFVSGEKRQPFSQLSGLTLPALLPE-- 123 Query: 122 KISKDGYRVWLTSHN-----DLGIIRYMVAMGTAHYVVMIDPASFI----DVIPYSSWQI 172 R+ L + D +I Y + V I + +I D++ + Sbjct: 124 -------RMILVAKRMAEGPDRPVILYAEKISAQKAVFTIVDSQYIQELMDILAAERSSV 176 Query: 173 DAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWAST 232 +GN N +++ D + +T+ NG ++++ + T ST Sbjct: 177 FRLTMGNG-NAIVSGVDSGEKPFLTQ------RFTSANG---------DIHLRVETSFST 220 Query: 233 KMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 L W + + I++ L L L + R ++ S ++ I N + VHYQP+ Sbjct: 221 --LSAWWLQNLLIFILLSLCFSFLFVLLYRRWRQKSLSLGREIERGIANNEFQVHYQPVF 278 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 ++ GAEAL RWPQ G ++SPD FI A+ G LT + + +D+ W + Sbjct: 279 NVGRSACGGAEALLRWPQPHGRFISPDIFITAAENEGKIVALTRHLFDLIAKDVSRW--K 336 Query: 353 HPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA-----LELTEREF-ADPKTS 405 P+ +IS+N+ L S+ D ++ ++A LELTER A+P Sbjct: 337 VPEGFYISVNIAPEHLISD-------DFVSDVMALKERLAKLGLILELTERSLIAEPAKV 389 Query: 406 APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHI 461 + + R EI +DDFGTGY SLSYLQ L D LKID++F++ ++ + I Sbjct: 390 SAKLELLRSQQVEIAIDDFGTGYCSLSYLQQLPADYLKIDRTFINTIDTSGSDVPILDTI 449 Query: 462 IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 I +++ L L++VAEG+ + Q ++ GV+Y QG+LY++ + DF+ W ++ + Sbjct: 450 ITLSQNLGLQVVAEGVSSKHQLRYILDQGVNYIQGYLYARPMSSADFMVWLDKDV 504 >UniRef50_A0YU61 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YU61_9CYAN Length = 641 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/239 (38%), Positives = 141/239 (58%), Gaps = 8/239 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 +L+ IEN++ C++YQPIVSL G++ G EAL RW + +SP FIP+A++TGL Sbjct: 371 QKLRIGIENQEFCLYYQPIVSLTTGELAGFEALVRWQHPEEGIISPGLFIPIAEETGLIY 430 Query: 333 PLTLLIIRSVFEDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 L I+ S +W ++ P + IN+ + L+ K L M+ V Sbjct: 431 ELGDWILNSAISQWKEWQQKFPCCLDLVLHINISAVQLSQYKFFTNLEKMLIEKNVERSG 490 Query: 390 IALELTEREFADPKT-SAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE + ++ ++ R + G ++ +DDFGTGYS LS+L++L +D LKID+SF Sbjct: 491 LKLEITESCLISKQVKTSRLLDRAKAMGLQLCIDDFGTGYSCLSHLRELPLDSLKIDRSF 550 Query: 449 VDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 V LE K+ V II +A L +++VAEGIETS+Q + LR G +GQG+L++K + Sbjct: 551 VMNLEDKDHDATVVRAIIALAHNLGMELVAEGIETSEQWQHLRMLGCEWGQGYLFAKPM 609 >UniRef50_C7QII4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QII4_CATAD Length = 1117 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 95/249 (38%), Positives = 134/249 (53%), Gaps = 10/249 (4%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 L R + L A+ ++YQPIV L +G I G EAL RWPQ DG+ + PD FIPL Sbjct: 828 LARSAARRSGLDRALAEGSFELYYQPIVWLDDGDIGGFEALVRWPQPDGTIIPPDEFIPL 887 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-----HISINLESPVLTSEKIPQLLRDM 379 A+ TG PL I+R+ + W Q IS+N+ + L P + Sbjct: 888 AEATGQILPLGRWILRTATDQAARWNVTRLAQGVAPVKISVNVSAHQLRDPGFPDEVGKA 947 Query: 380 INHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 + ++P + +E TE D T+ + +G + LDDFGTGYSSLSYL+DL Sbjct: 948 LTDAGLDPAFLMVEATESSLIDRAGTALANLRTLTRSGVGVSLDDFGTGYSSLSYLRDLP 1007 Query: 439 VDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 V+ LKIDK+FVD + + II +AK+L L +VAEG+ETS+Q L + G G Sbjct: 1008 VNTLKIDKAFVDGVPDEPRQTALVKGIIGIAKSLTLMVVAEGVETSQQRRALARMGADLG 1067 Query: 495 QGWLYSKAL 503 QG+LY++ + Sbjct: 1068 QGYLYARPM 1076 >UniRef50_Q15NC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NC5_PSEA6 Length = 681 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 93/239 (38%), Positives = 138/239 (57%), Gaps = 9/239 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 + + +AI+ + +HYQ V A+ IVG EAL RW + ++SP FIP+A+Q+G Sbjct: 438 NSIANAIKFNEFSIHYQGKVD-ADENIVGYEALIRWKSDELGFVSPAEFIPIAEQSGKIL 496 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 +T +I+ V +++ H + +SINL + + + + +R M Y V+ I Sbjct: 497 SITKWVIKRVCQELQQVHALHKNEIVVSINLSAHDIKNTALVDYIRGMFTRYNVDNASIE 556 Query: 392 LELTEREFADPKTSAP-IISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 E+TE + + A +++ RE G I LDDFG GYSSL YL ++++ LKIDK FVD Sbjct: 557 FEVTESAYLENFDVANHFLTQLREMGCSIALDDFGAGYSSLGYLTQIELNTLKIDKQFVD 616 Query: 451 ALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 L VT IIEMAK L LK+ AEG+ET +Q E+L ++G H QG+L+SK PK Sbjct: 617 NLNMSKRSTLVTKTIIEMAKQLNLKICAEGVETREQAEFLIENGCHQLQGYLFSK--PK 673 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 7/244 (2%) Query: 264 ILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIP 323 + RR+Q+ L+ A+E + +H+QP VSL +G+I G EAL RW + +SP FIP Sbjct: 703 LTRRLQT-ETLLRGALERDEFILHFQPKVSLTDGRISGLEALLRWNHPEQGMVSPADFIP 761 Query: 324 LAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINH 382 + + TGL P+ + +IR V E + W H + I+INL L + + + ++ ++ Sbjct: 762 ILEDTGLIIPVGVWVIRKVCETLKRWEENHIRLVPIAINLSVRQLQVKGLAETVKHIVEA 821 Query: 383 YQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDI 441 Y +NP + ELTE DP+++ I+ + G + +DDFGTGYSSL+YL+ +D Sbjct: 822 YGINPALLEFELTESMLMIDPESAVEILRDIKSYGISLSVDDFGTGYSSLAYLKRFPLDA 881 Query: 442 LKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGW 497 LKID++F+ + E +T +I +A L L ++AEG+ET Q E L +G QG+ Sbjct: 882 LKIDRAFIKDITSNHEDAAITRAVIVLAHELGLNVIAEGVETVDQLELLVTYGCDQMQGY 941 Query: 498 LYSK 501 L+SK Sbjct: 942 LFSK 945 >UniRef50_Q47CB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47CB3_DECAR Length = 715 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/231 (37%), Positives = 134/231 (58%), Gaps = 6/231 (2%) Query: 287 HYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDM 346 ++QP +S A G+I+GAE L RW +++PD FIPLA++ GL P++ +I V E + Sbjct: 470 YFQPKISAATGEIIGAEVLLRWQHPLLGFITPDRFIPLAEEVGLIHPISEWLISQVCELI 529 Query: 347 GDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKT 404 DWL + ISINL + + Q + +++N V Q+ +ELTE + T Sbjct: 530 ADWLGMRQKVGTISINLSAESFFQHSLIQFIDEVLNRTGVPASQLIIELTESVLMQNADT 589 Query: 405 SAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPH 460 + +I+ R+ G I LDDFGTG+SSL YL +D +KID+SFV LE + + Sbjct: 590 AHQVINELRQRGIRISLDDFGTGFSSLGYLNRFSIDEIKIDRSFVIDLEEQGKKRALVQA 649 Query: 461 IIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 II + L LK+VAEG+ET +Q + LR G QG+ +++ +P ++F+ + Sbjct: 650 IITLGTALGLKVVAEGVETRQQADLLRAMGCDIFQGFFFARPMPADEFIAF 700 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 141/248 (56%), Gaps = 6/248 (2%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 R + + L+ A+E + +HYQP +SLA+G++VGAEAL RW + + P FIP+A+ Sbjct: 602 RTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPVAE 661 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQV 385 GL P+ ++R+ + + W+ +S+NL S +P+L+ ++N Q+ Sbjct: 662 TCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHADLPELVTSILNEAQL 721 Query: 386 NPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 + LELTE DP + +++ E G + +DDFGTGYSSLSYL+ V +KI Sbjct: 722 PAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKI 781 Query: 445 DKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SFV + + K + II MA +L ++ +AEG+ET Q E+L+ G QG+ +S Sbjct: 782 DQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFS 841 Query: 501 KALPKEDF 508 + LP E F Sbjct: 842 RPLPVEQF 849 >UniRef50_C6XNM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNM0_HIRBI Length = 736 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 139/246 (56%), Gaps = 8/246 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L DA ++ VHYQPIV +G+ VG EALARW ++SP FIP A+ G+ L Sbjct: 482 LIDANLEEELQVHYQPIVDTHSGRTVGMEALARWNNPQLGFVSPAQFIPAAENLGIISKL 541 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 T +++ + W ++S NL + L S + P L +I +P+++ E+ Sbjct: 542 TTILMEKALKVASSWT---TDTYLSFNLSASDLASPETPLKLMAIIMRSGFSPKRLVFEI 598 Query: 395 TEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE + + + ++ +R+ G EI LDDFGTGYSSL Y+Q + +D LKID++FV LE Sbjct: 599 TETTMMVNFERANEVLRPFRDLGVEIALDDFGTGYSSLGYIQKMPIDRLKIDRAFVSDLE 658 Query: 454 YKNVTPH----IIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 K ++ I+++ L++K + EG+ET KQ E ++ G H QG+ YSK LP ++ Sbjct: 659 AKKISRDIMGTIVDLCSHLEIKCIVEGVETHKQLELVQLLGCHLIQGYYYSKPLPTDEAN 718 Query: 510 RWAEQH 515 + +Q+ Sbjct: 719 EFLKQN 724 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 6/237 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+EN + +HYQP V L+ GKI+G EAL RW + P FIP A++ L + Sbjct: 457 LKQALENDEFVLHYQPQVDLSTGKIIGLEALIRWQSPTLGLVPPGDFIPAAEEGRLISAI 516 Query: 335 TLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +I +V + + W RQ + ++IN+ + +K +L++ +N Y V P+ + LE Sbjct: 517 GEWVIFAVCKRLQSWRRQGLKIVPVAINISALQFMEQKTEELVKQALNEYMVEPKYLELE 576 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE DP TS ++ R ++ G + +DDFGTGYS+LSYL+ V+ LKIDKSFV L Sbjct: 577 LTESLSMLDPVTSISLMQRLKDIGVSLSIDDFGTGYSNLSYLKRFPVNKLKIDKSFVSGL 636 Query: 453 EYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 ++ II M+++L LK +AEG ET+ Q L QG+ +S+ LP+ Sbjct: 637 TNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAGQIALLAAENCDAIQGFYFSRPLPE 693 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 136/239 (56%), Gaps = 5/239 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E + + YQP + G ++G EAL RW ++ +SP FIPLA++ GL P+ Sbjct: 696 LRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEEQGLIVPI 755 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++R W Q I +N+ + E + ++ ++ + P + LE+ Sbjct: 756 GEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRPHLLDLEV 815 Query: 395 TERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL- 452 TE P+ + P + ++RE G + +DDFGTG+SSLSYL+ L ++ LKID+SFV + Sbjct: 816 TENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKIDQSFVRDIG 875 Query: 453 ---EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 E + + II +AK+L L+ +AEG+ETS+Q +LR HG H QG+ +S+ LP E+ Sbjct: 876 SDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRPLPAEEL 934 >UniRef50_A0NVG4 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVG4_9RHOB Length = 495 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 138/242 (57%), Gaps = 10/242 (4%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 RL+ AI ++++ +YQPI+ + +G+I G EALARW TD + P FIP+A+ G+ Sbjct: 236 EQRLRRAISDQEVKAYYQPILDMDSGRIAGFEALARWTDTDFGKVPPLQFIPIAEDCGII 295 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 LT ++ + +W P ++S NL L +P + ++ ++ +P ++ Sbjct: 296 SELTQHLLEDACKVAANW----PDDLYLSFNLSPVQLQDPALPLQISAILKKFEFSPSRL 351 Query: 391 ALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LE+TE +P+++ I++ EAG I LDDFG G+SSLSYL+D + +KIDKSF Sbjct: 352 VLEITETSLLKNPESAKRILTELTEAGISIALDDFGAGHSSLSYLRDFPIKKVKIDKSFT 411 Query: 450 DALEYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 + + I+E ++K L + VAEGIE S + L +G HYGQG+LY+ A+ Sbjct: 412 ERMLEDKQCAAIVEAILVLSKGLDIDAVAEGIEESAVHDALNSNGCHYGQGFLYAAAVTS 471 Query: 506 ED 507 E+ Sbjct: 472 EE 473 >UniRef50_A7HQX0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=A7HQX0_PARL1 Length = 991 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 139/249 (55%), Gaps = 8/249 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE R++ ++YQPI+SL +G + G EAL RW L+PD+F+PLA++ G+ + Sbjct: 740 LRHAIERREMELYYQPIMSLTDGGVRGFEALIRWNHPKEGLLAPDNFVPLAEELGVITEI 799 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 +R+ E++ W + P + +S+N+ S L + ++ ++N + + Sbjct: 800 GRFALRAASEELATWQKLFPMERALTVSVNVSSRQLLRHDLIDDVKRVLNRIDIERGTLK 859 Query: 392 LELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE +P+ +A +++R + G + LDDFGTGYSSLSYLQ D LK+D+SFV Sbjct: 860 LEVTESLVMENPEFAASMLTRIKALGAGLSLDDFGTGYSSLSYLQRFPFDTLKVDRSFVA 919 Query: 451 ALEYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + TP II +A L +++VAEG E+ Q L G YGQG+ + + + Sbjct: 920 GMSVDRETPLIIRSMVTLAHDLGMEVVAEGTESESQARDLADMGCDYGQGYYFGQPMRAA 979 Query: 507 DFLRWAEQH 515 + L + H Sbjct: 980 EALDFIAHH 988 >UniRef50_C6WMG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WMG3_ACTMD Length = 718 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 127/236 (53%), Gaps = 6/236 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI + +HYQPIV LA I GAEAL RW + L P FI LA+QTGL PL Sbjct: 475 LRAAIGTDQLVLHYQPIVDLATTAISGAEALVRWERPGRGLLGPGEFIGLAEQTGLIVPL 534 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++ S W + +++N+ + L++ L ++ + + +E+ Sbjct: 535 GSSVLTSACTQAAGWRAAGRELGVTVNVSTRQLSAPGFLAALAKSLDVSGLQASALTIEV 594 Query: 395 TEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV----D 450 TE +AD +++ RE G + LDDFGTGYSSLSYL D++KIDKSF D Sbjct: 595 TESVWADEAAMRALMA-VRETGVRVALDDFGTGYSSLSYLHRYPFDVVKIDKSFTWALGD 653 Query: 451 ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA-LPK 505 V II++A L VAEGIET +Q EWLR+ G +GQG+L+ + LP+ Sbjct: 654 TGRTAGVVRCIIDLADVLGAVTVAEGIETPEQAEWLRRAGCGFGQGFLFGRPDLPR 709 >UniRef50_A0YCW7 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCW7_9GAMM Length = 642 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 136/248 (54%), Gaps = 7/248 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 ++ AIE +D +HYQP ++ ++ G EAL RWP+ DGS+ PD FIP A+++GL L Sbjct: 394 IRRAIERQDFILHYQPKYNILTNRVEGVEALIRWPREDGSFTPPDEFIPHAEESGLINEL 453 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 + II +W RQ I++N+ + +P + + + H+ + I +E+ Sbjct: 454 SAWIIDEGCRQAAEWHRQGLAIPIALNMSPVQFANGDLPYIFQAALRHHSLPGEMIGIEI 513 Query: 395 TEREFADPKTSAPIISRYR---EAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 TE F + + ++ + E G EI +DDFGTGYSSLSYL L + ++KID+SF+ Sbjct: 514 TENCFIEDENLGQTNNQLKILNELGIEISIDDFGTGYSSLSYLHQLPIQVIKIDRSFIAQ 573 Query: 452 L----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 L E + II+++ L +VAEG+ET +Q WLR+ QG+ +S AL Sbjct: 574 LFVSAEGTAIVDAIIKLSHALGKTLVAEGVETKEQLAWLREKKCESAQGYYFSPALSPVK 633 Query: 508 FLRWAEQH 515 L +Q+ Sbjct: 634 ILELVQQN 641 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 89/239 (37%), Positives = 133/239 (55%), Gaps = 6/239 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ E +++ VHYQP V L +G+I G E L RW G+ ++P F+PLA++TGL P+ Sbjct: 871 LRRMFERQELRVHYQPQVGLQSGRITGLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPM 930 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++++ + WL + IN+ + L +L+ ++ + P + LE Sbjct: 931 GEWVLQAGCYQLKTWLDAGFAPMRLGINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLE 990 Query: 394 LTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE A + R R G I +DDFGTG+SSLSYL+DL D LKID++FV L Sbjct: 991 ITETVIMHNMNEAFETLRRLRAVGITISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNL 1050 Query: 453 EY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + N+ HIIEMA L LK++AEG+E Q ++LR+ G QG+L S+ L ED Sbjct: 1051 PFGNNEANIARHIIEMAHGLNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAED 1109 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 147/247 (59%), Gaps = 6/247 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++AIE +++ +HYQP + L +G +VG EAL RW + + + P FIPLA++ GL + Sbjct: 617 LRNAIERKELVLHYQPQLDLNSGDLVGVEALVRWQRPEIGLVPPGLFIPLAEEIGLINDI 676 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 L ++ DW RQ + +++NL + S +PQ + ++ + + +++ LE Sbjct: 677 GLWVLEEACRQTIDWDRQGYHVPRMAVNLAVQQIESGHLPQQVLQILQYTGLPAQRLELE 736 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE +PK +A + ++ G + +DDFGTGYSSL+YL+ L +D LKID+SFV + Sbjct: 737 VTESAIMIEPKKAADALLEFQSMGIRLAIDDFGTGYSSLAYLKRLPLDRLKIDRSFVMDI 796 Query: 453 EYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 ++ II ++ +L + VAEGIE + Q E+LR+ G GQG+L+SK LP + Sbjct: 797 GTNAGDDIISRAIINLSNSLGMDTVAEGIENTDQLEFLRREGCEIGQGYLFSKPLPADAV 856 Query: 509 LRWAEQH 515 + + +++ Sbjct: 857 MAFMDKN 863 >UniRef50_C8WJV1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJV1_EGGLE Length = 1435 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/283 (33%), Positives = 150/283 (53%), Gaps = 25/283 (8%) Query: 237 KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRL---QDAIENRDICVHYQPIVS 293 KG + Q F W G+ LR I+ H L Q A+E +I + QP + Sbjct: 256 KGNYAQRFRWYDDGM-------------LREIKDDHSLLLEVQQALEKGEITFYAQPKCN 302 Query: 294 LANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR-- 351 L GKIVG EAL RW + + P FIP+ ++ GL L L I VF + W+ Sbjct: 303 LDTGKIVGLEALVRWMHPERGLIPPIQFIPMLERNGLITALDLHIWEEVFRALRAWVDAG 362 Query: 352 QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIIS 410 Q P IS+N+ L + + +I Y + PR +A+E+TE + D + I+ Sbjct: 363 QAPVP-ISVNVSRRDLYALDVLGTFEGLIEKYDIPPRLLAVEITESAYVEDCELIVDIVE 421 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE-----YKNVTPHIIEMA 465 + + G +++DDFG+GYSSL L+D++VD+LK+D +DA++ +++ II MA Sbjct: 422 GFHDLGISVHMDDFGSGYSSLGMLKDVNVDVLKLDMKLLDAIDAQSRKARSILEAIIGMA 481 Query: 466 KTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 L ++++AEG+ET Q + L + G YGQG+ + K +PK +F Sbjct: 482 NLLDIRVIAEGVETESQRQLLVKMGCLYGQGYFFYKPMPKAEF 524 >UniRef50_D0L1D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1D4_HALNC Length = 958 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 8/244 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ N ++ ++YQP V++ +G +G EAL RW + +SPD FIP+A++TGL P+ Sbjct: 708 LRAAVGNNELSLNYQPQVNI-DGCCIGVEALLRWHHPELGVVSPDEFIPIAEETGLIHPI 766 Query: 335 TLLIIRSVFEDMGDWLRQHP--QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 L ++ +D+ W Q H+++N+ L S ++ ++ Y ++P++I L Sbjct: 767 GLWVLEQACKDLSRWHENGIPFQGHMAVNVSPWQLISTNFVNEIKQIVEQYPLDPKRIML 826 Query: 393 ELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE + S + + R G +I LDDFGTGYSSLSYL+D+ +D LKIDKSF+D Sbjct: 827 EVTESTLLHNRYESIAKLEQLRHLGFKISLDDFGTGYSSLSYLKDIPLDQLKIDKSFIDE 886 Query: 452 LEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 LE + + I + + L ++AEG+ET Q E L G QG+L+SK L + D Sbjct: 887 LEKTDDEQPLLASIYAIGIHMHLAIIAEGVETQNQCERLISMGGKAFQGYLFSKPLTELD 946 Query: 508 FLRW 511 + W Sbjct: 947 LIAW 950 >UniRef50_A4C7A0 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C7A0_9GAMM Length = 1264 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 87/237 (36%), Positives = 135/237 (56%), Gaps = 6/237 (2%) Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 S L AIEN++ ++YQP + KIVG EAL RWPQ DG+ + P FIP+A+Q G Sbjct: 1003 SKESALFHAIENQEFILYYQPKFNTLTNKIVGYEALVRWPQADGTVVGPGEFIPIAEQNG 1062 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 PLT ++++ F+ W Q + I+INL + + + L ++ + ++ R Sbjct: 1063 AIIPLTKVLVQQAFKQTKIWYEQGKLEGRIAINLSAVHFQQASLIEDLAHYLSIFNISGR 1122 Query: 389 QIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 LE+TE DP+ + +++ + G I LDDFGTG+SSLSYL+ +D LKID+S Sbjct: 1123 HFELEITESAMMQDPEFALNQMNKLKTLGFSIALDDFGTGHSSLSYLKKFPIDTLKIDRS 1182 Query: 448 FV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 F+ + + +N+T II +AK L + +V+EG+ET Q L G + QG+ +S Sbjct: 1183 FIIDITTSEQDRNITSTIIRLAKYLNISVVSEGVETYAQAYLLHVMGCNVVQGYYFS 1239 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E + + +QPIV+ +G++VGAEAL RW + + PD FI +A+++G PL Sbjct: 480 LRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFIQVAEESGFIVPL 539 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R+ M DW P IS+N+ + +I ++P +ALE Sbjct: 540 GEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSIIRETGMDPSFLALE 599 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D + +A + + +E I +DDFG GYSSL YLQ +D +KID+SF+ L Sbjct: 600 MTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDL 659 Query: 453 EY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 K + II MA LKL++VAEG+ETS+Q ++L++ G H QG+ + + L +E F Sbjct: 660 SSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGFYFHRPLSEELF 719 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 143/248 (57%), Gaps = 6/248 (2%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 ++L+ A+E + +HYQP L N +++G EAL RW +D +SP FIPLA++TGL Sbjct: 769 NQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAEETGLII 828 Query: 333 PLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 P+ +++ W+ Q H + +S+N+ + L + Q ++ ++ Q+ + + Sbjct: 829 PIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQLPTQYLC 888 Query: 392 LELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE + S ++ E G +I +DDFGTGYSSL+ L+ L + +KIDKSF+ Sbjct: 889 LEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIR 948 Query: 451 ALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 ++ + II MA +L+L + AEG+ET Q+ L Q +Y QG+LYSK LP E Sbjct: 949 DMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAE 1008 Query: 507 DFLRWAEQ 514 + LR+ ++ Sbjct: 1009 ECLRFVQE 1016 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 134/242 (55%), Gaps = 5/242 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E R+ +HYQP +SL ++VG EAL RW + +SP +FIP+A++ GL + Sbjct: 474 LRTALERREFELHYQPQISLTQHRVVGMEALLRWNHPNLGLVSPATFIPVAEEMGLIGDI 533 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 + ++ + W H +S+NL S+ + ++ + + +++ P Q+ LE Sbjct: 534 SRWVLEEACGQLARWREAGHNDLRMSLNLSPHDFDSQDVVTMVTECVERHRLPPSQLELE 593 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D A + REAG + +DDFGTGYS+L+YLQ V LKID+SFV L Sbjct: 594 ITESMMMQDAAGVAAKVRGLREAGLSVAIDDFGTGYSALAYLQKFPVSTLKIDRSFVREL 653 Query: 453 EYKNVTP---HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 E N P I +A+ L+++AEG+E S+Q E LR G QG+LY++ P + Sbjct: 654 EGPNTNPIISAITGIARGFGLQLIAEGVERSEQAETLRTLGCDVMQGFLYARPAPAAEAT 713 Query: 510 RW 511 W Sbjct: 714 AW 715 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 5/242 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ + +HYQP+V LA+G+++GAE L RW + + P FIPLA++TGL PL Sbjct: 634 LRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPL 693 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++ WL +++NL + +R + + P Q+ LEL Sbjct: 694 GDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELEL 753 Query: 395 TEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE + A + + G + +DDFGTGYSSL+YL+ +D LKID+SFV L Sbjct: 754 TEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLP 813 Query: 454 YKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + + II M + LKL+ +AEG+ET +Q +LRQ G GQG+L+S LP E F Sbjct: 814 RDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFE 873 Query: 510 RW 511 RW Sbjct: 874 RW 875 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 83/252 (32%), Positives = 147/252 (58%), Gaps = 4/252 (1%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 RR+Q ++ L+ A++ +++ V+YQP V + +G+I+G+EAL RW + +SP+ FIPLA Sbjct: 663 RRLQLENN-LRKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLA 721 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQV 385 ++TG+ E + + + W + HP+ I++NL + +E + + ++N + Sbjct: 722 EETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKTGL 781 Query: 386 NPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 R + +ELTE D + +++R + G + +DDFGTGYSSLS+L +D LKI Sbjct: 782 AARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKI 841 Query: 445 DKSFVDALEYKN--VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 D+SFV+++ N + II + +TL L ++AEG+E ++Q + L Q G QG+ +S+ Sbjct: 842 DRSFVNSMSLDNNGIARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRP 901 Query: 503 LPKEDFLRWAEQ 514 + F E+ Sbjct: 902 VHDNAFSEMLEK 913 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 7/261 (2%) Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 G A R R +Q + L+ A+E + +HYQP VSL G++VGAEAL RW + Sbjct: 714 GFFTADLQARTARALQI-ENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPEL 772 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKI 372 ++P FIP+A+ +G L ++ + D WL Q P + +S+NL + ++ Sbjct: 773 GVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQL 832 Query: 373 PQLLRDMINHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 P+++ + + R++ LELTE DP + ++ + + G + +DDFGTGYSSL Sbjct: 833 PEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSL 892 Query: 432 SYLQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 S L+ + LKID+SFV D + + II MA+ L ++ AEG+ET Q ++LR Sbjct: 893 SCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLR 952 Query: 488 QHGVHYGQGWLYSKALPKEDF 508 G GQG+L+S+ LP + F Sbjct: 953 AQGCDEGQGYLFSRPLPADAF 973 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 86/238 (36%), Positives = 131/238 (55%), Gaps = 6/238 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ + +HYQP V+ G+IVG EAL RW Q + PD+FIPLA++TGL P+ Sbjct: 613 LRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPI 672 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R+ W Q IS+N+ T + +P +R ++ + P + LE Sbjct: 673 GEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELE 732 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE +P+ + +++ +E G I +DDFGTGYSSLS L+ L DILKIDKSFV + Sbjct: 733 ITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGI 792 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + + II + + L +VAEG+E +Q +L + QG+ +SK LP E Sbjct: 793 PGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAE 850 >UniRef50_C8X1L9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1L9_DESRD Length = 936 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 83/234 (35%), Positives = 140/234 (59%), Gaps = 5/234 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A++ ++ ++YQPI+ L +G++ EAL RW + ++SP FIPLA+QTGL EP+ Sbjct: 654 LRRALDREELVLNYQPIIKLDSGELNSLEALIRWKHPEHGFISPGKFIPLAEQTGLIEPI 713 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 +++ + W + +++NL S L + + + ++ ++P + LE+ Sbjct: 714 GKWVLKEACRQVKIWRESNKSLIMNVNLSSKQLEKAGLERNIYQILQDINLDPACLNLEV 773 Query: 395 TER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE + +++ + R + G + +DDFGTGYSSL++LQ +D LKID+SF+ +L+ Sbjct: 774 TESAAMSKLESNVRTLKRLKFMGIRLSIDDFGTGYSSLAHLQRFPLDELKIDRSFIISLK 833 Query: 454 ----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 + I+E+A LKLKMVAEGIET+ Q ++ HYGQG+L+SKA+ Sbjct: 834 AGKACHRIVHAIVELALGLKLKMVAEGIETNSQLNMVKTFNCHYGQGFLFSKAM 887 >UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQD5_ANATD Length = 1016 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 142/237 (59%), Gaps = 6/237 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE ++YQP+++L + +I EAL RW + +SP FIP+A+ +GL + Sbjct: 766 LKKAIEADQFELYYQPVINLKDMEIHSVEALLRWVSPEKGIISPLEFIPVAEDSGLIVKI 825 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++I F D+ +W ++ H++IN+ + L ++ ++++ I Y VNP++I+ E Sbjct: 826 GEMVIEKAFSDLKNWEKKGISYLHMAINISARQLKTKFFEKMIQKQIERYGVNPQKISFE 885 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE + S I+S + G + +DDFGTGYSSL YL+ L + +KID+SF+ + Sbjct: 886 ITETGAVENFDVSLKILSFLCQLGIKFLIDDFGTGYSSLIYLRRLPIGGVKIDRSFISEI 945 Query: 453 EYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 E + I+E MA L LK++AEG+ET ++ E L++ G + QG+L+SK +PK Sbjct: 946 ELSKESRAIVEGIILMAHKLDLKVIAEGVETKRELEILKEIGCDFAQGYLFSKPVPK 1002 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 88/232 (37%), Positives = 135/232 (58%), Gaps = 5/232 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A E +++ +HYQP V +A+GK+ G EAL RW D +SP FIPLA+QT L P+ Sbjct: 778 LRYAKERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPI 837 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++R+ W Q ++++NL + L S + + + +I+ + P + LEL Sbjct: 838 GEWVLRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELEL 897 Query: 395 TEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE +P ++ R R G I +DDFGTGYSSLSYL+ V ILKID+SFV L Sbjct: 898 TESALVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLA 957 Query: 454 Y----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 + + + ++++A L +K VAEG+E+ +Q L+Q G Y QG++YS+ Sbjct: 958 HNSGDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSR 1009 >UniRef50_C6N1K4 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N1K4_9GAMM Length = 579 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 142/249 (57%), Gaps = 6/249 (2%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + L A+E ++ ++YQP + L G++ GAEAL RW ++P FIP+A+ G+ Sbjct: 325 ENMLYQAVEKNELILNYQPFIDLRTGRVCGAEALVRWQNPVLGLVAPMDFIPIAEMNGMI 384 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 P+ ++R+ + + +W +S+NL + L E + + ++++ ++NP+ + Sbjct: 385 LPIGEWVLRAACQQLKEWQNSGFNTFKMSVNLSAKQLIQEDLVDCIAEILDTLKLNPQYL 444 Query: 391 ALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LELTE + + + PII++ E G +DDFGTGYS S L+ VD +KIDK FV Sbjct: 445 ELELTESNVFNNE-AIPIINKLAEMGIAFAIDDFGTGYSEFSNLKLFKVDKIKIDKIFVQ 503 Query: 451 AL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 L + +N+ + I +A + + +AEG+ET +Q ++L+++G + QG+ +S L E Sbjct: 504 DLNVNIDSRNIVCNTIALANRMHIDCLAEGVETEEQTQFLKENGCYIMQGYYFSTPLSAE 563 Query: 507 DFLRWAEQH 515 DF + +++ Sbjct: 564 DFFVFLKKY 572 >UniRef50_A3WLN6 Putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box n=1 Tax=Idiomarina baltica OS145 RepID=A3WLN6_9GAMM Length = 886 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 135/243 (55%), Gaps = 6/243 (2%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 ++LQ AIEN+ + V YQP V L + +I+G EALARW G+W+ PD FIPLA+ TG Sbjct: 637 RNQLQVAIENQQLEVFYQPFVDLKSEQIIGVEALARWRDKQGNWIPPDVFIPLAEHTGQI 696 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 PL+ LI+ ++ ++ Q P +SINL L + ++ + + + Y++ + Sbjct: 697 MPLSDLILEMSIREVAQYVAQ-PNFILSINLSPKQLQNGQLVSQVTQLAHKYKIPFSTLQ 755 Query: 392 LELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 ELTE D K + ++ R G +I +DDFGTGYSSLSYL DL DI+KID+SF Sbjct: 756 FELTETMLVDDAKAAFKQLAELRTLGCKIAIDDFGTGYSSLSYLNDLPADIIKIDRSFTR 815 Query: 451 ALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + + +T +I MA L + EGIE +++ + + QG+ + + +P E Sbjct: 816 RVLTDSSSHPITEAVISMALGLNKSITVEGIENAEEAAYFARRSCQAAQGFYFYRPMPLE 875 Query: 507 DFL 509 + Sbjct: 876 QLI 878 >UniRef50_Q1GRA4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GRA4_SPHAL Length = 570 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 141/251 (56%), Gaps = 9/251 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++AIE + + +QP++ +A+G++ G EALARW + G +SP FIP+A+ +GL PL Sbjct: 315 LRNAIEEDRLHLAFQPLIEMASGRVAGFEALARWDNSSGVAVSPTEFIPIAEDSGLIVPL 374 Query: 335 TLLIIRSVFEDMGDWLRQHPQQ----HISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 I + DW RQ+ Q + S+N+ + L + + ++R + + + ++ Sbjct: 375 GQWAIGKAAAVLADWDRQNGGQVVNAYFSVNVSAIQLVRDDVAGVVRQALQKHGIGGERL 434 Query: 391 ALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF- 448 +ELTE DP + ++ + + +DDFGTGYS+L+YLQ L +D+LKID+SF Sbjct: 435 MIELTESAIIGDPDLALSVLRELKALDARVAMDDFGTGYSNLAYLQRLPIDVLKIDRSFV 494 Query: 449 ---VDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 VD + + I +A+ L +K AEG+ET+ Q L G +GQG+L+++ + Sbjct: 495 EHMVDDRDKVAIVRTIQSLAEVLGMKTTAEGVETTDQARLLSALGCDFGQGYLFARPMDG 554 Query: 506 EDFLRWAEQHL 516 + L + Q L Sbjct: 555 KAALDYWRQSL 565 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 89/247 (36%), Positives = 135/247 (54%), Gaps = 6/247 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE +HYQP + L + +VGAEAL RW + +SPD FIPLA+++GL PL Sbjct: 409 LRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEESGLILPL 468 Query: 335 TLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +IR + +W +S+NL S + +++ + V+P + LE Sbjct: 469 GEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDPEYLELE 528 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE AD + S + +R+ G + +DDFGTGYSSL+YL+ + LKID+SF+ L Sbjct: 529 LTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHDL 588 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + I MA +L LK++AEG+E Q + L + QG+L+SK L +DF Sbjct: 589 GLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDDF 648 Query: 509 LRWAEQH 515 L + + H Sbjct: 649 LMYLKAH 655 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 142/247 (57%), Gaps = 6/247 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ + +HYQP +S +G +VGAEAL RW + +SP FIP+A+ G P+ Sbjct: 901 LRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPI 960 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R+ + + DW+ P +++NL + + +L+ +++ +V R + LE Sbjct: 961 GEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELE 1020 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV--- 449 LTE DP+ + ++ + G ++ +DDFGTGYSSLSYL+ V LKID+SFV Sbjct: 1021 LTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDI 1080 Query: 450 -DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 D + K + II MA +L ++ +AEG+ET+ Q +LR G + QG+ +SK LP E F Sbjct: 1081 TDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQF 1140 Query: 509 LRWAEQH 515 + + ++ Sbjct: 1141 VSYLQKQ 1147 >UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF4_JANMA Length = 914 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 89/250 (35%), Positives = 137/250 (54%), Gaps = 6/250 (2%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 +L AI+ V+YQP V G++VG EAL RW + ++PD FIPLA+ TG+ Sbjct: 659 RQLARAIQEDHFIVYYQPRVEAQTGRMVGMEALVRWAHPERGLIAPDHFIPLAESTGMIL 718 Query: 333 PLTLLIIRSVFEDMGDW-LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 PL L++ VF + W ++ +S+N+ + + + + +N Y V+PR I Sbjct: 719 PLGRLVMEKVFCQIAAWQFQKLAVVPVSVNVSARQFDEGNVSEFIASCLNKYAVDPRFIE 778 Query: 392 LELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 +ELTE + + IS G +I++DDFGTGYSSLS L ++D+LK+D++F Sbjct: 779 IELTESAMMGNFEQVRGEISSISALGIQIHVDDFGTGYSSLSLLYKFNMDVLKVDRAFTS 838 Query: 451 ALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + I+ MAK LK+++VAEG+ET +Q L+Q G QG+L SK +P Sbjct: 839 QICNGKGGEIFFSSIVSMAKVLKMRVVAEGVETIEQLRVLQQLGCDEIQGYLVSKPIPSS 898 Query: 507 DFLRWAEQHL 516 D R +Q + Sbjct: 899 DVPRLLDQSI 908 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 81/252 (32%), Positives = 143/252 (56%), Gaps = 6/252 (2%) Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 + H L+ A+ N++ C++YQP++ LA+ ++ EAL RW + L P FI +A++TG Sbjct: 753 NTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETG 812 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 L +PL ++ + + D+ + +N+ + + + +P L R +I Y ++PR Sbjct: 813 LIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPR 872 Query: 389 QIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 + E+TE P + I+ G + +DDFGTGYSSLSYL+ ++ LK+D+S Sbjct: 873 NLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRS 932 Query: 448 FV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 FV + ++ + I +A +L+LK+VAEG+ET Q ++LR G QG+L+S+ + Sbjct: 933 FVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPV 992 Query: 504 PKEDFLRWAEQH 515 P ++ L + Q+ Sbjct: 993 PADEVLAFIRQY 1004 >UniRef50_Q21WB0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WB0_RHOFD Length = 499 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 136/242 (56%), Gaps = 5/242 (2%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 H RL++A+ + +HYQP V + +G IVGAEAL RW + +SP FIP+A+ TGL Sbjct: 248 HTRLKEAMAQGILQLHYQPQVDVESGAIVGAEALLRWHDPELGHVSPARFIPVAEATGLI 307 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 PL+ ++ + + + W + +++N+ + +P+ +R + + + Sbjct: 308 LPLSDWVLETACQQIAAWTQAGTPLRVAVNVSAQQFRQRNLPEQVRAALARTGAQAQWLD 367 Query: 392 LELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 +E+TE P + + G I LDDFGTGYSSL+YL+ L V LKIDKSF+D Sbjct: 368 IEITESVAMTQPAQAREQLDALVGLGCRIALDDFGTGYSSLAYLKALPVSKLKIDKSFMD 427 Query: 451 ALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + ++ II +AK+L L +VAEG+ET Q +LRQ+G QGWL++KA+ + Sbjct: 428 GIPQDANDVAISRAIIALAKSLGLTLVAEGVETDAQLAFLRQYGCEVYQGWLFAKAMTVQ 487 Query: 507 DF 508 + Sbjct: 488 EL 489 >UniRef50_A3D8U3 Diguanylate cyclase/phosphodiesterase with GAF sensor n=21 Tax=Gammaproteobacteria RepID=A3D8U3_SHEB5 Length = 650 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 7/241 (2%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 R Q H L DA+ ++ +HYQP ++L N K++GAEAL RW ++PD FI LA+ Sbjct: 390 RYQLESH-LVDALNKNELSLHYQPFINLKNQKVIGAEALLRWHNPILGNVTPDRFIALAE 448 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQV 385 + G + ++ + W R+ Q+ I+IN+ + + + + + D++ YQ+ Sbjct: 449 RNGQIIDIGNFVLHTALAQAAKWCRELDQEFKIAINISPLQMRNPRFSEHIADLLTLYQL 508 Query: 386 NPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 P + LE+TE D + I + +E G I LDDFGTGYSSLSYLQ D LKI Sbjct: 509 PPTALELEITEGMLMQDEHIAHNAIQKLQELGIRISLDDFGTGYSSLSYLQKYSFDTLKI 568 Query: 445 DKSFVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+ F++ LE + +T II + K L L ++AEG+ET +Q+ ++R GQG+LY Sbjct: 569 DRCFINKLEENEQDRELTKAIIAIGKKLNLVVIAEGVETLEQDAFIRHEECDLGQGYLYG 628 Query: 501 K 501 K Sbjct: 629 K 629 >UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS6_9CLOT Length = 916 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 137/248 (55%), Gaps = 6/248 (2%) Query: 274 RLQDAIENRDICVHYQPIVSLANG--KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 +L A++N + ++ QP + A KI+GAEAL RW DG +PD FIP+++ + Sbjct: 666 KLNKALDNNEFNLYLQPQIIFAENEFKIIGAEALIRWKTIDGKIFTPDKFIPVSETNRMI 725 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 P+ I+ +F +SIN+ S + + ++++ + Sbjct: 726 IPIGNWILEEIFRIDKVLKDNGINIKLSINISSKQFENGNLVSKIKELFKENDSQNIDLV 785 Query: 392 LELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 +E+TE D +++ + ++ G EI +DDFGTG+SSLSYL L VD LKIDKSF+D Sbjct: 786 IEITESFLLQDTESAIQSLLEIKKLGIEISIDDFGTGFSSLSYLARLPVDYLKIDKSFID 845 Query: 451 ---ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + +KN+T +II MAKTL LK VAEG+ET +Q L G QG+ +SK L +D Sbjct: 846 DILSTNHKNLTSNIISMAKTLNLKTVAEGVETEEQANRLMDEGCDELQGYYFSKPLIIDD 905 Query: 508 FLRWAEQH 515 F+++ +Q Sbjct: 906 FIKYVKQF 913 >UniRef50_A0YP30 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YP30_9CYAN Length = 352 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 85/234 (36%), Positives = 138/234 (58%), Gaps = 5/234 (2%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 L A++ + + YQPIV N KIVG EAL RW W++P FIPLA++TGL Sbjct: 102 EKELHQALKQDEFVLFYQPIVCTQNAKIVGFEALIRWQHPRRGWVTPIEFIPLAEETGLI 161 Query: 332 EPLTLLIIRSVFEDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 + + ++R + + W Q P +S+NL S L++ ++ ++ +I +NP Sbjct: 162 QLIGDWVLRQACQQLEIWQEQFPLDSSLKMSVNLSSLQLSNPQLSLRVQQIIQQTHLNPE 221 Query: 389 QIALELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 + LE+TE F + + A + ++ G +++DDFGTGYS+LS LQD +D+LKID S Sbjct: 222 SLQLEITETAFLENSSIALANLQNLKQQGVSLHIDDFGTGYSNLSRLQDWSIDVLKIDNS 281 Query: 448 FVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 FV ++ N+ I+ +A++L L+++AEG+ET + L+Q G Y QG+L+S+ Sbjct: 282 FVRTGKW-NMIQAILMLAQSLNLEVIAEGVETEQDWVQLQQLGCPYLQGYLFSR 334 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 89/235 (37%), Positives = 130/235 (55%), Gaps = 6/235 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+EN + +HYQP L N +VG EAL RW +SP FIPLA++TGL PL Sbjct: 706 LKHALENNQLHLHYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGEFIPLAEETGLIHPL 765 Query: 335 TLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R W + +++N+ S L +L + +N +Q++P+ I LE Sbjct: 766 GRWVLREACRQAKFWQNNFARIVPVAVNVSSLQLKKNNFVHVLEECLNEFQIDPQLIELE 825 Query: 394 LTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D + S +++ + G + +DDFGTGYSSLSYL+ LKID+SFV L Sbjct: 826 ITESAVMDRLEKSMELLNAIKGLGFNLAIDDFGTGYSSLSYLKKFPFSKLKIDRSFVMDL 885 Query: 453 EYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 E + II MA +L LK +AEG+ET +Q+ +L HG QG+L S+ L Sbjct: 886 ETDENDAAIITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCDEVQGFLLSRPL 940 >UniRef50_C9RNS7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNS7_FIBSS Length = 667 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 143/248 (57%), Gaps = 7/248 (2%) Query: 275 LQDAIENRDICVHYQPIVSL-ANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 ++ AI+ ++ + YQPIV + A KIVG EAL RW Q++ +SP FIP+A++TGL P Sbjct: 401 IRRAIQAQEFVLMYQPIVDIQAGNKIVGFEALVRWNQSERGIISPAEFIPIAEETGLIVP 460 Query: 334 LTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 + LI+R + W+ + +++N + + + + +R ++ +NPR + L Sbjct: 461 MGALILRMACKQTKQWVDMGYKDIQVAVNFSAKQFSMDSMVDDVRRVLTETNLNPRNLKL 520 Query: 393 ELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE + + I+ G +I +DDFGTGYSSLSYL+ V LK+DK FVD Sbjct: 521 EITEYTAMCEADKTIEIMRALSNMGIQISIDDFGTGYSSLSYLKRYPVHTLKMDKYFVDH 580 Query: 452 L----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + E + +I +AK+L L ++AEG+ET +Q ++L + G H QG+ +S+ L + Sbjct: 581 VADNEEDASFARMVIGIAKSLNLDLIAEGVETKEQLDFLYREGCHLIQGFYFSRPLNTDM 640 Query: 508 FLRWAEQH 515 L + ++H Sbjct: 641 ALEYMKEH 648 >UniRef50_B4RZW0 GGDEF domain-containing PAS signal transduction protein n=3 Tax=Alteromonadales RepID=B4RZW0_ALTMD Length = 794 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/251 (37%), Positives = 145/251 (57%), Gaps = 9/251 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 + L+ AI+N ++ + YQPI S +GK + AEAL RW + ++PD FIPLA+++GL Sbjct: 545 NDLRYAIQNDELFIEYQPITSFKDGKAIKAEALLRWQHPEKGRIAPDEFIPLAEESGLII 604 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQ-HISINLE-SPVLTSE-KIPQLLRDMINHYQVNPRQ 389 ++ + V +++ W + ++ I IN S E I L +++ + R Sbjct: 605 EISNWVFEEVCKNVKRWQTHYCRELQICINTSPSQYFQQETSITDWLTRLLDE-NIAARS 663 Query: 390 IALELTEREFADPKTS-APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 I LE+TE + T+ + + ++R+AG +I LDDFGTGYSS+SYL+ L D LKIDKSF Sbjct: 664 ILLEVTENLLMEADTNVSKKLFQFRQAGVDIALDDFGTGYSSISYLKKLPTDYLKIDKSF 723 Query: 449 V----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V D K + II MAK L +K+VAEG+ET +Q + L G +GQG+ ++ + Sbjct: 724 VKTMTDVSNDKVLCEAIIVMAKKLGIKVVAEGVETQEQYDILNNMGCDFGQGYFIARPMS 783 Query: 505 KEDFLRWAEQH 515 K +F + + H Sbjct: 784 KTNFEAFLKAH 794 >UniRef50_B7KI79 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=4 Tax=Cyanobacteria RepID=B7KI79_CYAP7 Length = 580 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 138/241 (57%), Gaps = 12/241 (4%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 LQ AI+N+++ +HYQPIVSL G+I EAL RW +SP FIPLA++TGL PL Sbjct: 323 LQQAIQNQELYLHYQPIVSLETGEITAFEALLRWHHPTRGLISPAEFIPLAEETGLIIPL 382 Query: 335 TLLIIRSVFEDMGDWLRQHPQ---QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 + + + W + P +S+NL L++ + + + +++ + + Sbjct: 383 GQWALSQACQRLRLWQEEFPHLSALSMSVNLSGVQLSNPDLIKQIDELLESVGLCGDSLK 442 Query: 392 LELT-----EREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 LE+T E +P + I+ + +E ++ +DDFGTGYSSLSYL L +DILKID+ Sbjct: 443 LEITESFLMENMIENPLAANQILKQLKERQIKLCIDDFGTGYSSLSYLHHLPIDILKIDR 502 Query: 447 SFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SF+++ K + I+ +AK L L +VAEGIET KQ L+Q YGQG+L++K Sbjct: 503 SFLNSKTEKGKNSEIVKSIVNLAKDLGLALVAEGIETEKQLTMLKQLQCDYGQGYLFAKP 562 Query: 503 L 503 L Sbjct: 563 L 563 >UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAA4_KANKD Length = 1128 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/247 (36%), Positives = 140/247 (56%), Gaps = 6/247 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++A+ N + YQP +SL+N +VGAEAL RW + +SP FIPLA+Q+GL + Sbjct: 874 LKEALTNDQFHLVYQPQMSLSNNSMVGAEALLRWEHPEWGTVSPAEFIPLAEQSGLIVQI 933 Query: 335 TLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +I+ V + WL R P+ I++NL + + + + ++ V P I +E Sbjct: 934 GEWVIQQVAQQQKSWLERGLPEVIIAVNLSALQFHQPDLVETITSLVRKAGVVPENIEVE 993 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF---- 448 LTE DP+ + I AG ++ +DDFGTGYSS+SYL+ V LKID+SF Sbjct: 994 LTEAVALKDPEVAGTTIDALSRAGFKVSIDDFGTGYSSMSYLKKFAVHKLKIDQSFIKDI 1053 Query: 449 VDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 V ++ + + II+MA +L +AEG+ET +Q ++LR+ G QG+ YS+ L E F Sbjct: 1054 VTDIDDQAIVTAIIQMAHSLHKTTIAEGVETQEQLDFLRKKGCEEMQGYWYSRPLVTEQF 1113 Query: 509 LRWAEQH 515 ++ + H Sbjct: 1114 EQFLKSH 1120 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/240 (36%), Positives = 139/240 (57%), Gaps = 7/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE ++ ++YQP V L +G I+GAEAL RW + +SP FIP+A++TGL P+ Sbjct: 327 LRQAIEKNELVLYYQPQVDLHDGTIIGAEALIRWKHPERGLISPAQFIPVAEETGLIVPI 386 Query: 335 TLLIIRSVFEDMGDW--LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 ++R+ + W L P + + INL + + + L+ +++N + ++P + L Sbjct: 387 GEWVMRTAIRQIAIWKELGVTPVR-VGINLSALQFKRQNLAALVEELLNEHDIDPSLVDL 445 Query: 393 ELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE D A ++ R G ++ +DDFGTGYSSLS L+ LKID+SFV Sbjct: 446 EITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYSSLSQLRQFPFQTLKIDRSFVTD 505 Query: 452 LEY---KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 LE K + II MA +L+ ++ EG+ETS Q +++ + QG+L+SK LP E+F Sbjct: 506 LESSGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTIMKELNCNEMQGFLFSKPLPAEEF 565 >UniRef50_C9XPW5 Putative signaling protein n=5 Tax=Clostridium difficile RepID=C9XPW5_CLODC Length = 739 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 137/230 (59%), Gaps = 6/230 (2%) Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 V+YQP SL G+++G+EAL RW + ++SP FIP+A+++ L + + V D Sbjct: 507 VYYQPKFSLVTGEMIGSEALIRWNHPEHGFISPAVFIPIAEKSKLILKIGRFVFERVCND 566 Query: 346 MGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPK 403 + +W +Q + +SINL L I + + I Y ++ I +E+TE + Sbjct: 567 LSEWKKQGKKIVPVSINLSRVELYQPDIVKFINKTIQMYNLSSDLIEIEITETVAINELN 626 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY----KNVTP 459 +++ R+ G I +DDFGTGYSS+S L+D+ +DILK+DKSF++ +E+ +N+ Sbjct: 627 ILKNVLNELRKYGFSISMDDFGTGYSSISCLRDMPIDILKLDKSFLNGIEHDERSRNIAK 686 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 I+ +AK+L L ++ EG+E+ +Q E ++Q G QG+ +++ +P ++FL Sbjct: 687 SIVSLAKSLDLVVIIEGVESKEQAELMKQFGCDLVQGFYFARPMPAKNFL 736 >UniRef50_Q21RH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=6 Tax=Proteobacteria RepID=Q21RH2_RHOFD Length = 1135 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/245 (36%), Positives = 133/245 (54%), Gaps = 5/245 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE D+ ++ QP V + G++ GAE L RW + + P FI LA+QTGL +PL Sbjct: 867 LRRAIEGGDLLLYLQPKVEITTGRLCGAEGLVRWKHAERGLIPPGEFIGLAEQTGLIKPL 926 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 T +I++ W + I++NL + L E++ Q +R + Y V + LE Sbjct: 927 TEWVIKTSLRLNQAWQYEGCALPIAVNLSAHNLHDERLLQTIRHLQTTYGVAAGLLELEN 986 Query: 395 TEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE D A ++ R+ G +Y+DDFGTGYSSLSYLQ L V+ +KID+SFV + Sbjct: 987 TESAVMDDAEFALRVLHSLRDEGIPLYIDDFGTGYSSLSYLQKLPVEYIKIDQSFVRDMT 1046 Query: 454 YKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + I++ + L K VAEGIET +Q + L G QG+ ++ +P EDF Sbjct: 1047 ISRDSSLIVRSTIDLVRDLGRKTVAEGIETQEQWDQLAACGCDIAQGYFIARPMPAEDFQ 1106 Query: 510 RWAEQ 514 W +Q Sbjct: 1107 NWVKQ 1111 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 85/232 (36%), Positives = 135/232 (58%), Gaps = 6/232 (2%) Query: 281 NRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIR 340 + + +HYQP V + +G+IVG EAL RW + + P SFIPLA+++GL PL+ ++R Sbjct: 807 DNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLR 866 Query: 341 SVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE- 398 W Q P +S+NL + V I +L+ ++ + PR + LELTE Sbjct: 867 EACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTI 926 Query: 399 FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EY 454 + + + +++ G + +DDFGTGYSSLSYL+ VD LKID+SFV + + Sbjct: 927 MRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDD 986 Query: 455 KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + +T II +A +LKL+++AEG+ETS Q ++L++ QG+ ++K L E Sbjct: 987 ETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTE 1038 >UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=10 Tax=Bradyrhizobiaceae RepID=Q07VI3_RHOP5 Length = 750 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/242 (36%), Positives = 134/242 (55%), Gaps = 12/242 (4%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI++ + HYQP++ L +G+I G EAL RWP + +SP FIP+A++TGL PL Sbjct: 492 LRQAIQHDVLRPHYQPLIGLNSGRITGCEALVRWPHPERGLVSPAEFIPVAEETGLINPL 551 Query: 335 TLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R D W P I+INL + ++ D + ++P+++ LE Sbjct: 552 GTQVLRRACLDAAAW----PDDVRIAINLSPLQFRVGNLLSVVMDALKQSGLSPKRLELE 607 Query: 394 LTEREFADPKTSAPIISRY--REAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV-- 449 +TE + K+S I + + R G I +DDFGTGYSSLSYL+ D +KID+SFV Sbjct: 608 ITETLLLE-KSSQVIATLHALRALGARISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRG 666 Query: 450 --DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 D E + + II + L + + AEG+ET + WLR G H QG+L+S A P + Sbjct: 667 VCDNRELQAIVRSIISLGMGLGVTITAEGVETEAELNWLRAEGCHEAQGFLFSPARPDAE 726 Query: 508 FL 509 + Sbjct: 727 IV 728 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 135/246 (54%), Gaps = 6/246 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+ ++ +HYQP + LA+G IVG EAL RW + + P FIPLA++TGL P+ Sbjct: 586 LRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPI 645 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +I + W P +++N+ + ++ +L + + V+PR + LE Sbjct: 646 GAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLE 705 Query: 394 LTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE A P+ + + R G + LDDFGTGYSSLSYL VD LKID+SF+ + Sbjct: 706 LTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHI 765 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + N+ +I +A + LK+VAEG+ET Q +LR++ QG+L+S +P ++F Sbjct: 766 VSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEF 825 Query: 509 LRWAEQ 514 Q Sbjct: 826 ATLVSQ 831 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 137/234 (58%), Gaps = 8/234 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE ++ V+YQPI+ L NG ++G EAL RW +SP FIP+A++TGL L Sbjct: 645 LRRAIERDELVVYYQPIICLKNGTLIGVEALVRWQHPQEGMISPAEFIPIAEETGLIIEL 704 Query: 335 TLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 ++ + + M W ++ +S+NL + + + + +++ ++ + + Sbjct: 705 DQWVLNTACQQMRFWQEKYSDFKSITLSVNLSGRQFSQPDLIKNIDNILTQNKLEKQYLK 764 Query: 392 LELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE +P ++A ++ + E + LDDFGTGYSSL YL +D+LKID+SFV Sbjct: 765 LEITETVLIENPNSAAEMLEQLIERKVTVCLDDFGTGYSSLGYLHRFPLDVLKIDRSFVS 824 Query: 451 ALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 +E + II +A+ L+++++AEGIET +Q E+L+ G HYGQG+ +S Sbjct: 825 NIETNTSNSTIIRTIITLARELEIEVIAEGIETEQQREFLQSLGCHYGQGYWFS 878 >UniRef50_B6BMJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ7_9PROT Length = 829 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 122/391 (31%), Positives = 199/391 (50%), Gaps = 42/391 (10%) Query: 150 AHYV---VMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSD------EIAQGIITRLQ 200 HYV ++I+ A + ++ S I + I G+ N++I + EIA+ I Q Sbjct: 449 GHYVGDKLLIEIAKNLSIVMRESDTI-SRIGGDEFNILIEDLESLSHIGEIAEKFIK--Q 505 Query: 201 KTPGEHIENNGIIYD------ILPLP-EMNISIITWASTKMLQ-KGWHRQVFIWLPLGLV 252 T +IENN I I P E +++ A M + K R + + L Sbjct: 506 MTIPLYIENNAITISGSIGISIYPDDGEDTTTLLKNADLAMYKAKDNGRNQYSFFSKELE 565 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + L + +L+ L++A+ + ++YQP SL +G I AEAL RW + Sbjct: 566 VSLSKRINMLK----------ELKEAVNRDEFRLYYQPKFSLIDGSIKSAEALIRWDSKE 615 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEK 371 ++SPD FIPL++ +G + +I+ ED W +S+N+ + T + Sbjct: 616 FGFVSPDDFIPLSEDSGEIVKIGAWVIKQACEDFASWSELGLGITQVSVNVSNVQFTRDD 675 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 I ++L D I ++P I +E+TE D + + I+ R+ G ++ +DDFGTGYSS Sbjct: 676 IVKVLSDNIIKSGISPESIEVEITESYMQEDSERALQILHDVRKIGVDLAVDDFGTGYSS 735 Query: 431 LSYLQDLDVDILKIDKSF-------VDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 +SYL+ L ++ LKID+SF VD +E +T I+ +AKT+ L + AEGIET +Q Sbjct: 736 MSYLKRLPINRLKIDRSFIGDIPHDVDDVE---ITRIIVALAKTMGLAITAEGIETLEQM 792 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +L++ GV GQG++ SK LP E F+ ++ Sbjct: 793 HFLQEMGVDEGQGYICSKPLPYEQFVELLKK 823 >UniRef50_A4BNI1 Putative signal transducer protein with histidine kinase domain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNI1_9GAMM Length = 654 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 136/242 (56%), Gaps = 6/242 (2%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 H L A+ + + HYQP V L G+++G EAL RW L P FI +A+++G Sbjct: 400 HDLGQALTHDEFLFHYQPQVELTTGRVIGCEALIRWHHPKYGLLYPSRFISMAEESGAII 459 Query: 333 PLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 PL +R V + W R+ P HI++NL + + L+ ++ V+P + Sbjct: 460 PLGEWSLREVCRQLKVWQREGLPIGHIAVNLSAVQFRYPEFASLVDQVLRDASVDPACLE 519 Query: 392 LELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE +P+ +A ++++ + G ++ +DDFG GYSSL YL+ V +LKID+S +D Sbjct: 520 LEVTESLAMENPELAASLVAQLKRLGVKLAIDDFGAGYSSLGYLKRFPVQMLKIDRSLID 579 Query: 451 ALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 L +T +IE+ +L + ++AEGIET +Q ++LR+H +GQG ++ A+P Sbjct: 580 ELATNGCDAAITIAVIELGHSLDMHVLAEGIETREQLDFLRRHHCDFGQGTSFAAAMPAG 639 Query: 507 DF 508 +F Sbjct: 640 EF 641 >UniRef50_A3XSN8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Vibrio sp. MED222 RepID=A3XSN8_9VIBR Length = 526 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/263 (35%), Positives = 144/263 (54%), Gaps = 18/263 (6%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 LRRI + + +AIENR+ +YQP L +I+GAEAL RW + +G + PD FI L Sbjct: 261 LRRI-TLIKEINNAIENREFIPYYQPQFCLKTNRIIGAEALMRWKKPNGDLVRPDLFIEL 319 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-------ISINLESPVLTSEKIPQLLR 377 A+Q+ L P+ I D W Q H +++N+ S + + I L + Sbjct: 320 AEQSHLIIPMGAHIFEQATTDCQQW-----QNHKALAGVKVAVNISSIQFSEQNILDLTQ 374 Query: 378 DMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 + ++P + LE+TE D +++ ++ EI LDDFGTGYSSLSYL+ Sbjct: 375 LTLEKTGLSPSLLELEVTESAMLGDVSKVVAVLNDLKKLNIEIALDDFGTGYSSLSYLKL 434 Query: 437 LDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 L +D LKID+ FV L + + + I ++A L L ++AEGIE +Q E+L + G H Sbjct: 435 LPIDRLKIDREFVKDLLSNTDDQAILSMICKLATELSLNVLAEGIEEKEQLEFLGRAGCH 494 Query: 493 YGQGWLYSKALPKEDFLRWAEQH 515 QG+ ++K +P +DF+ +A+ H Sbjct: 495 EVQGFYFAKPMPLDDFVLFAKNH 517 >UniRef50_Q082T6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=21 Tax=Shewanella RepID=Q082T6_SHEFN Length = 734 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 134/246 (54%), Gaps = 5/246 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L AI R+ ++YQP++ L N K +GAEAL RW L P +FI +A+QTG+ + Sbjct: 484 LHHAIRGREFELYYQPLMDLQNNKYIGAEALIRWNHPKKGVLYPGAFIEIAEQTGMINQI 543 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++ + + + W ++ + +N+ + S + + + +I Y + P+ + LE+ Sbjct: 544 GEWVLETACKQLNLWQHKNVNIAMHVNVAARQFFSGNLYEQVWRLITRYHIKPKTLILEI 603 Query: 395 TEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV---- 449 TE E D + + + E G + +DDFGTGYSS+ YL+ + LKID+SF+ Sbjct: 604 TETELMGDIRYAINLCHELAELGVGLAIDDFGTGYSSMKYLKQFPISKLKIDRSFIMDIS 663 Query: 450 DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + E + + II MAK L + + AEG+ET +QEE+L H+ QG+LYS A+ DF Sbjct: 664 SSHESREIVSAIIAMAKALNISLTAEGVETKEQEEFLTLSACHHAQGFLYSPAIRVNDFA 723 Query: 510 RWAEQH 515 + H Sbjct: 724 LFINAH 729 >UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Bacillus sp. SG-1 RepID=A6CIZ8_9BACI Length = 988 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/246 (37%), Positives = 144/246 (58%), Gaps = 4/246 (1%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 ++ S + L+ A++N+++ HYQP V K+VGAEAL RW + +SP FIPLA+ Sbjct: 578 KLYSLENDLRRAVKNKELYFHYQPKVDAQTEKLVGAEALIRWEHPEWGQVSPAEFIPLAE 637 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQV 385 + L +T +++ + +W R P ISIN+ + + + L +IN+ V Sbjct: 638 ENDLIFKVTSWTFQTICTQIKNWTDRNLPLVPISINVSPKIFIKNEWQEELIYIINNSNV 697 Query: 386 NPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 +PR I LE+TE+ + ++ + I + ++ G +I LDDFGTGYSSL YL+ +D +KI Sbjct: 698 DPRLIELEITEQALIKNEESFSAGIEKLKQLGVKISLDDFGTGYSSLLYLKKFKLDTVKI 757 Query: 445 DKSFVDA-LEYK-NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 DKSFVD L+ K +T II MA + ++AEG+ET Q+ +L++ QG+LYSK Sbjct: 758 DKSFVDDILKGKPTITKAIINMAHEFDMTVIAEGVETRAQQSFLQKQDCDQIQGYLYSKP 817 Query: 503 LPKEDF 508 + ED Sbjct: 818 ILPEDL 823 >UniRef50_Q73DV7 Sensory box/GGDEF family protein n=76 Tax=Bacillus cereus group RepID=Q73DV7_BACC1 Length = 702 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/240 (34%), Positives = 142/240 (59%), Gaps = 5/240 (2%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 ++L AIE + ++YQP +++ KI EAL RW + ++SP+ FIPLA++TG Sbjct: 456 NQLHRAIEKNEFFLYYQPQINIETKKIASMEALIRWENKELGFVSPNQFIPLAERTGFII 515 Query: 333 PLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 L ++ V + +WL + + I++N+ + S + +++ ++ Y V +A Sbjct: 516 KLDEWVVNEVCRQIREWLNKGYEVVPIAVNISARHFRSITLIEMITRALHKYNVPAHLLA 575 Query: 392 LELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 +E+TE S ++ + +E +I+LDDFGTGYSSLSYL+ +D LKID+SF++ Sbjct: 576 IEVTEGALIHKDISKRVLLQLKEQNLKIHLDDFGTGYSSLSYLKTYPIDTLKIDRSFMEG 635 Query: 452 LEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + N+T II +A TL+L ++AEG+E ++Q ++L++ V + QG+ YS+ L K D Sbjct: 636 IHVDERDTNITAAIIHLAHTLELNVIAEGVEKAEQIQFLKEKNVKFVQGYYYSRPLSKYD 695 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/247 (34%), Positives = 143/247 (57%), Gaps = 6/247 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A++ ++ ++YQP +S +NG+I+GAEAL RW + +SP FIP+A+ +G + Sbjct: 699 LRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEI 758 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R+ +W+ I++NL + + L+ D++ Q+ + LE Sbjct: 759 GEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELE 818 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE DP++ +++ + E G + +DDFGTGYSSLSYL+ V LKID+SF+ + Sbjct: 819 LTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDI 878 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + + II+MA L L+ +AEG+ET++Q +LR HG H QG+ +SK LP +F Sbjct: 879 SNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEF 938 Query: 509 LRWAEQH 515 ++ H Sbjct: 939 EQFRHNH 945 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 10/307 (3%) Query: 219 LPEMNISIITWASTKML-----QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHH 273 LP+ I+ A T M+ QK + + L LV+ L+ + +L QSP Sbjct: 212 LPDEKADRISIAGTPMIIMFYNQKLTPNDIRLTLLGSLVLSLMIGVLCYYMLLLRQSPER 271 Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 L I+ + + YQP+ G I G EAL RW + PD FIP A+ GL P Sbjct: 272 ALMRGIKRNEFFIEYQPVFHTKTGTIAGLEALIRWQHPIEGRIPPDLFIPYAESEGLIVP 331 Query: 334 LTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 LT + R + ED PQ + +N+ L++ Q + +++ N + Sbjct: 332 LTRHLFRLIAEDAPRLATALPQGAKLGLNISPSHLSAPSFHQDVYELLAQLPGNYFTLVF 391 Query: 393 ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 E+TER + + + G EI +DDFGTG+S+L YLQ +D LKID+ FV+++ Sbjct: 392 EITERGMVEEGNALAEFDWLHKQGIEIAIDDFGTGHSALIYLQRFSMDYLKIDRGFVNSI 451 Query: 453 EYKNVTP----HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 VT +I +AK LK++ VAEG+ET++Q +L++ V++ QG+ YSK L ++F Sbjct: 452 GRDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQVSFLQEQDVNFMQGYYYSKPLSIDNF 511 Query: 509 LRWAEQH 515 + + H Sbjct: 512 VAFCNAH 518 >UniRef50_A6QAR7 Signal transduction protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAR7_SULNB Length = 958 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 144/244 (59%), Gaps = 6/244 (2%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 AIE +++ +H+QP +L + I+G EAL RW +SP+ FI +A++TGL + Sbjct: 708 AIERKELLLHFQPQYALESRNIIGVEALLRWKNEQLGIVSPEKFIGIAEETGLIVSIGYF 767 Query: 338 IIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 + + W ++ ISIN+ S E I + L+++I + +I +E+TE Sbjct: 768 VFEEACKTYMHWQKEGIDIDSISINMSSIQFREEDIFERLQEIILRIGIPAHKIEIEITE 827 Query: 397 REFADPKT-SAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 R + T + I+ R G +I +DDFGTGYSS+SYL+ L +D +KIDKSF+ L + Sbjct: 828 RFIMEYSTINLTILEDLRNIGCKISIDDFGTGYSSMSYLKRLALDTIKIDKSFITDLPHD 887 Query: 456 N----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + V+ II ++K+L +++AEGIET +QE +L+++G GQG+ ++K + EDF+ + Sbjct: 888 SHDAMVSKAIIALSKSLGYQVIAEGIETPEQEAFLKKNGCDIGQGFYFAKPMTSEDFISF 947 Query: 512 AEQH 515 ++ Sbjct: 948 FNEY 951 >UniRef50_A0YPN8 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YPN8_9CYAN Length = 1177 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/257 (35%), Positives = 147/257 (57%), Gaps = 15/257 (5%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 LRR+Q L+ A+E + ++YQPI+ L+ GKI G EAL RW ++SP FIP+ Sbjct: 918 LRRLQI-QTDLRFALEQEEFQLYYQPIIELSTGKIAGFEALLRWEHPQQGFISPGEFIPV 976 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI---SINLESPVLT---SEKIPQLLRD 378 A++TG+ PL ++R + W + + S+NL S T S+++ Q+L++ Sbjct: 977 AEETGIIVPLGEWVLREACRQLHTWKEKFSLSKLLMMSVNLSSQQFTVDLSQRVDQILQE 1036 Query: 379 MINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDL 437 V R++ LE+TE ADP+ + ++ ++ I +DDFGTGY SL YL Sbjct: 1037 T----HVLGRELKLEITETAIMADPQLAIATLNELKQREIMICIDDFGTGYCSLGYLHQF 1092 Query: 438 DVDILKIDKSFVDALEY---KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 VDILKID+SFV+ ++ + + I+E+A++L++ +AEGIET +Q L+ YG Sbjct: 1093 PVDILKIDRSFVNKMQVGDKREIVRVIVELAESLRMDAIAEGIETEEQYIQLQNLHCKYG 1152 Query: 495 QGWLYSKALPKEDFLRW 511 QG+ ++K L + +W Sbjct: 1153 QGYYFAKPLHPNEAEQW 1169 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 143/245 (58%), Gaps = 7/245 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANG-KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 L+ A+ENR++ ++YQP LA+ ++GAEAL RW +G ++PD FIPLA+++GL Sbjct: 507 LRQAVENRELLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGA 566 Query: 334 LTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 + +I + W Q +Q +++N+ + + + +++ + +++ L Sbjct: 567 IGDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFEL 626 Query: 393 ELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 ELTE + P+ +A +++R G I LDDFGTGYSSL+YL + +LKID+SFV Sbjct: 627 ELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRD 686 Query: 452 LEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 L +++ + II +A + L++VAEG+ET +Q +L+ G QG+L+S LP E Sbjct: 687 LNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQ 746 Query: 508 FLRWA 512 F ++ Sbjct: 747 FAEFS 751 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 138/241 (57%), Gaps = 6/241 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE + +HYQP + LA GK++G EAL RW +SP FIPLA++TGL P+ Sbjct: 610 LRKAIERNEFVLHYQPQIELATGKLIGVEALIRWQHPCLGMVSPALFIPLAEETGLICPI 669 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +++ W + P+ +++NL + L I + +I ++NPR + LE Sbjct: 670 GEWALKTACHQYQIWQQAGLPKIQMAVNLSAFQLQQYDIVARIAKIIQETRINPRDLELE 729 Query: 394 LTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE + + II + ++ G +I +DDFGTGYSSL+ L+ L V+ LKIDKSFV L Sbjct: 730 ITETTVIQNLERMTSIIEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVNTLKIDKSFVQDL 789 Query: 453 EY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + II + K KL+++AEG+ET KQ E+L+ G + QG+L S+ +P + Sbjct: 790 SNDPNDAKLCQAIIMLGKAFKLEVLAEGVETIKQLEFLKNCGCDHAQGFLISRPVPPDAL 849 Query: 509 L 509 L Sbjct: 850 L 850 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/250 (35%), Positives = 143/250 (57%), Gaps = 9/250 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 H L+ A+ + +HYQP++ + G++VG EAL RW W+SP FIP+A++T L Sbjct: 586 HDLRVALGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIV 645 Query: 333 PLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPV--LTSEKIPQLLRDMINHYQVNPRQ 389 PL I+ DW R P Q I++NL SPV + ++ D+++ P Q Sbjct: 646 PLGRWILHRSCLQGRDWARAGLPPQKIAVNL-SPVQFKNHTALLAMIADILDQTGFPPDQ 704 Query: 390 IALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE + + + ++ + R+ G I +DDFGTGYSSL+YL+ VD LKID+SF Sbjct: 705 LQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSF 764 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + + V I+ + +L ++ EG+ET +Q ++L+ HGV QG+ ++KALP Sbjct: 765 VVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALP 824 Query: 505 KEDFLRWAEQ 514 ++F R+ + Sbjct: 825 PDEFARFVRE 834 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 6/232 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L A+ N ++ ++YQP V L G+I G EAL RW + + PD FIP+A+ GL P+ Sbjct: 445 LHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPI 504 Query: 335 TLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R+ W R+ HP I++NL + + + ++R + + P + LE Sbjct: 505 GEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEETGLAPDSLELE 564 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD-- 450 LTE D A + + G + LDDFGTGYSSLSYL+DL +D++KID+SF+D Sbjct: 565 LTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDV 624 Query: 451 --ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 + E ++T II MA++L ++ VAEG+ET Q +L +H H QG+ +S Sbjct: 625 TTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFS 676 >UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH Length = 511 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 10/293 (3%) Query: 224 ISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENR 282 S+I KM L W +Q + +P+ + G+L A + R RR SP L++A+ + Sbjct: 208 FSLIYIIPVKMQLTYAW-KQAWYMIPVAIFGGILTAFLLSR--RRPSSPLDMLKNALAHG 264 Query: 283 DICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 + ++QPI+S N ++ G E L RW + PD FIPLA+ TGL P+T ++ V Sbjct: 265 EFRPYFQPIISAKNHQLTGCEVLIRWHHPVSGIIPPDQFIPLAESTGLIAPITQQLMSQV 324 Query: 343 FEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFA 400 + P Q HI IN+ S + ++ + ++ LELTER + + Sbjct: 325 EHSLNSVAHFLPNQFHIGINISPAHFLSPGLEDSCMKFLSTFPKGKVKLVLELTERNQLS 384 Query: 401 DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPH 460 S + ++ + G LDDFGTGY++ SYLQ VD +K+DK FV + ++ H Sbjct: 385 VTAESKALFAKLHQQGVLFALDDFGTGYATHSYLQSFPVDYIKLDKGFVQMVGVDEISGH 444 Query: 461 I----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 I IE+A+ L + ++AE IET QE ++ + G Y QG+ Y+ LP E F+ Sbjct: 445 IVENVIELARRLGIDIIAEVIETESQELFMTEKGSCYLQGYRYAPPLPAEQFI 497 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 138/246 (56%), Gaps = 6/246 (2%) Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 ++L A+E VHYQP + L +G+I G EAL RW + + P FIP+A+ TGL Sbjct: 615 QNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLI 674 Query: 332 EPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 EPL ++R+ ++ W R P ++S+NL +P ++ ++ + ++ Sbjct: 675 EPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERL 734 Query: 391 ALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LE+TER D + + +SR G + +DDFGTG+SSL+YL+ L V LKID+ FV Sbjct: 735 ELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFV 794 Query: 450 DALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 D + + + +I + +TL+L+++AEG+ET +Q +LR+HG QG+ ++ +P Sbjct: 795 DGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPA 854 Query: 506 EDFLRW 511 + W Sbjct: 855 GELTGW 860 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 141/248 (56%), Gaps = 7/248 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 + LRR + ++ L+ A++ ++ ++YQP V + GKIVG EAL RW +SP FI Sbjct: 684 QTLRRFELENN-LRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFI 742 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMIN 381 P+A++TGL P+ I+R W R +++NL + +PQ + +++ Sbjct: 743 PMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLE 802 Query: 382 HYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 + P+ + LE+TE D + + R+ G + +DDFGTGYSSL+YL+ L +D Sbjct: 803 DTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPID 862 Query: 441 ILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 ILKID+SF+ L ++ + II + LK+K+VAEG+ET +Q +LRQ QG Sbjct: 863 ILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQG 922 Query: 497 WLYSKALP 504 +L++K LP Sbjct: 923 YLFTKPLP 930 >UniRef50_A1KBS5 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBS5_AZOSB Length = 752 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 141/251 (56%), Gaps = 15/251 (5%) Query: 268 IQSPHH-------RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 +++PH+ L A+ R+I + Q LA+G +VGAEALARW + DG+ + P + Sbjct: 488 METPHNLRFQLARELHHALRGREIGIALQAQYDLASGTVVGAEALARWTRADGTPIPPTT 547 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH--ISINLESPVLTSEKIPQLLRD 378 FIPLA+ GL PL II E + L H I++N+ + L + LR Sbjct: 548 FIPLAEANGLIAPLGKHIIELTCEALA-RLAAAGFGHLPIAVNVSALQLAQTGLLDELRA 606 Query: 379 MINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDL 437 + + ++P + +E+TE D + + ++ R EAG I +DDFGTGYSSL+YL+ L Sbjct: 607 TLEAHGLDPHILEIEVTESIAMDERYATGNMLGRLCEAGFPIAIDDFGTGYSSLAYLRTL 666 Query: 438 DVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHY 493 LKID+SFV + E + + II + + L ++++AEG+E S Q +WL+ G H+ Sbjct: 667 PAHTLKIDRSFVQEIGVTPERQTIADMIIGLGRRLDMRVIAEGVENSAQADWLKTRGCHH 726 Query: 494 GQGWLYSKALP 504 QG+L+++ P Sbjct: 727 AQGYLFARPEP 737 >UniRef50_B0C4N3 Diguanylate cyclase/phosphodiesterase with EAL domain n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4N3_ACAM1 Length = 585 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/248 (36%), Positives = 143/248 (57%), Gaps = 7/248 (2%) Query: 262 LRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 L+ L R+Q H L A+ ++ V YQPI+SLA+G + EAL RW LSPD F Sbjct: 317 LQSLTRMQ-LEHDLSRAVWQNELRVCYQPIISLADGSLQAFEALVRWQHPTLGLLSPDQF 375 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMI 380 I +A+ +GL P+ I+R E + W Q H + +NL + L + +R ++ Sbjct: 376 IAIAEDSGLIIPIGAWILREACEQIHKWRNQTHLPLSMHVNLSARQLDQLDLLDSIRGIL 435 Query: 381 NHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDV 439 Q++PR + LE+TE F + + +A ++ + + G ++ +DDFGTGY+SLSYL L V Sbjct: 436 AETQLDPRGLKLEITETMVFNNLEYAAAMLRQIKGLGIQLSMDDFGTGYASLSYLHQLPV 495 Query: 440 DILKIDKSFVDALEYKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQ 495 D LKID+SFV+ ++ I I++A +L + +VAEG+ET +Q L+ G Y Q Sbjct: 496 DNLKIDRSFVETIDTSGTESEIIQAVIQLAHSLNIDVVAEGVETVEQANRLKNLGCEYAQ 555 Query: 496 GWLYSKAL 503 G+L++K + Sbjct: 556 GYLFAKPM 563 >UniRef50_C1F918 Sensory box/GGDEF family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F918_ACIC5 Length = 694 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/235 (35%), Positives = 132/235 (56%), Gaps = 8/235 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E ++ H+QP + G++VG EAL RW G + PD FIPLA+++GL PL Sbjct: 8 LERALERDELVPHFQPYFEMKTGRVVGFEALIRWQHPSGELILPDRFIPLAERSGLITPL 67 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 T ++R V M + H S+N+ L + +PQ+ + Q +++ +E+ Sbjct: 68 TRNLLRHV---MAAAVELPDHLHFSVNVSPLQLRDDTLPQMFEAAASAAQYPLQRMTVEI 124 Query: 395 TEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL- 452 TE D +A I + + G + +DDFGTGYSSL +LQ L D++K+D+SFV + Sbjct: 125 TESALIDNLDRAASIAADLKSLGLLLAVDDFGTGYSSLKHLQALPFDVIKVDQSFVRCMV 184 Query: 453 ---EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 E + + ++ + +TL L+ VAEG+ET QE L+ G GQGWL+ + +P Sbjct: 185 ERRESRKIVSAVLGLGQTLGLRTVAEGVETPDQERMLQWLGCDVGQGWLFGRPMP 239 >UniRef50_Q9RX49 Sensory box/GGDEF family protein n=1 Tax=Deinococcus radiodurans RepID=Q9RX49_DEIRA Length = 805 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/239 (36%), Positives = 133/239 (55%), Gaps = 8/239 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 H L+ A+ ++ V YQP++ L G+I G EAL RW + L PD F P+A+++GL Sbjct: 539 HELRRALAADELRVRYQPVLDLDRGRIEGFEALVRWQHPERGLLGPDDFTPIAEESGLLP 598 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 + ++ ++ W R +P H+S+N S L + + + +++++ +P + Sbjct: 599 DIDRWVLARACRELVQWQRLYPHDPPLHLSVNFCSQHLAAPDVHERVKELLQRTGFDPGR 658 Query: 390 IALELTEREFADPKTSAPI-ISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE + R R+ G ++LDDFGTGYSSLSYLQ +D+LKID+SF Sbjct: 659 LNLEITESSLLSQTGDVQRNMERLRQLGVRLHLDDFGTGYSSLSYLQLYPIDVLKIDRSF 718 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 V + + I+ MAK L LK+VAEGIE +Q LR G GQG+L+S AL Sbjct: 719 VQGMLDNDSNAELVRTIVAMAKNLNLKVVAEGIEDPRQLAALRGLGCDAGQGFLFSPAL 777 >UniRef50_B8K6V6 Signal transduction protein n=3 Tax=Vibrio RepID=B8K6V6_VIBPA Length = 829 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 138/247 (55%), Gaps = 8/247 (3%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L AI+N ++ VH+QP V+L G VGAEAL RW L P SF+ +A+++ L + Sbjct: 568 LHRAIKNDELVVHFQPKVNLDTGATVGAEALVRWQHPSLGLLPPASFLEVAEKSDLIIEI 627 Query: 335 TLLIIRSVFEDMGDWLRQH---PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 + R V + +W H P+ ISIN + + + + L+ +++ + Sbjct: 628 DKWVFRKVASLLANWKTHHVPLPEMLISINFSARMFYMSDLAEQLQAILDETGGSASDFM 687 Query: 392 LELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TER+ D T A I+R + G +I +DDFGTGYSSLS L++L D LK+D+SF+ Sbjct: 688 LEITERDMMRDVDTCADTINRLHQKGFKIAIDDFGTGYSSLSVLKNLSADCLKLDRSFIK 747 Query: 451 ALEYKNV----TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + + NV T ++++A+ L L +VAEG+ET + LR G QG+ +SK L + Sbjct: 748 DISHSNVDLEITCAVMKLAQVLDLAVVAEGVETHEHANTLRGIGCDLAQGFYFSKPLAVD 807 Query: 507 DFLRWAE 513 +L + E Sbjct: 808 KWLAFLE 814 >UniRef50_B6BL35 Diguanylate cyclase/phosphodiesterase n=2 Tax=Epsilonproteobacteria RepID=B6BL35_9PROT Length = 280 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/240 (35%), Positives = 139/240 (57%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A++N + V+YQ V+ I+G EAL RW +SP FIPLA+ TGL L Sbjct: 33 LRAALKNEEFIVYYQAQVNGDTDTIIGMEALVRWQHPTMGLVSPAKFIPLAESTGLIVEL 92 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHI-SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++++ + W + + ++NL L E ++ ++++ Q P +ALE Sbjct: 93 DRYVMKTAMTQISKWYEEGLNPGVLAMNLAVKQLQKEDCIEVFQELVKVTQCRPEWLALE 152 Query: 394 LTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV--- 449 +TE + P+ + I+ + + G E+ +DDFGTGYSSL+YL+ L +D LKID++F+ Sbjct: 153 VTEGKIMTHPEKAIVILQKISDLGIELSVDDFGTGYSSLAYLKRLPIDKLKIDQAFIRDL 212 Query: 450 -DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 D E +T +I +AK+L LK++AEG+ET Q ++L ++G QG+ YSK +P ++F Sbjct: 213 PDDEEDAGITKAVIALAKSLNLKVIAEGVETQVQRDFLVENGCENIQGYFYSKPIPSDEF 272 >UniRef50_B7VQ16 Putative uncharacterized protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQ16_VIBSL Length = 731 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/263 (35%), Positives = 144/263 (54%), Gaps = 18/263 (6%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 LRRI + + +AIENR+ +YQP L +I+GAEAL RW + +G + PD FI L Sbjct: 466 LRRI-TLIKEINNAIENREFIPYYQPQFCLKTNRIIGAEALMRWKKPNGDLVRPDLFIEL 524 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-------ISINLESPVLTSEKIPQLLR 377 A+Q+ L P+ I D W Q H +++N+ S + + I L + Sbjct: 525 AEQSHLIIPMGAHIFEQATTDCQQW-----QNHKALAGVKVAVNISSIQFSEQNILDLTQ 579 Query: 378 DMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 + ++P + LE+TE D +++ ++ EI LDDFGTGYSSLSYL+ Sbjct: 580 LTLEKTGLSPSLLELEITESAMLGDVSKVVAVLNDLKKLNIEIALDDFGTGYSSLSYLKL 639 Query: 437 LDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 L +D LKID+ FV L + + + I ++A L L ++AEGIE +Q E+L + G H Sbjct: 640 LPIDRLKIDREFVKDLLSNTDDQAILSMICKLATELSLNVLAEGIEEKEQLEFLGRAGCH 699 Query: 493 YGQGWLYSKALPKEDFLRWAEQH 515 QG+ ++K +P +DF+ +A+ H Sbjct: 700 EVQGFYFAKPMPLDDFVLFAKNH 722 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 130/238 (54%), Gaps = 5/238 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE +++ V+YQP + +++G EAL RW LSP FIP+A++TGL + Sbjct: 562 LRKAIERKELVVYYQPQFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEI 621 Query: 335 TLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R M W + P +S+NL S + Q +++++ ++ P + LE Sbjct: 622 GTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELE 681 Query: 394 LTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 +TE DP S I+ + G I LDDFGTGYSSLSYL+ + LKID+SF+ L Sbjct: 682 ITESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLS 741 Query: 454 Y----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 K + II MAK LKL ++AEGIET Q + L ++ QG+ YS+ L + Sbjct: 742 RNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANE 799 >UniRef50_B8HEA5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEA5_ARTCA Length = 730 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/251 (39%), Positives = 139/251 (55%), Gaps = 11/251 (4%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 LQ A++ +I V +QPIVS +G++V EALARW + G + P FIPLA++TGL + Sbjct: 476 LQFALQGGEITVDFQPIVSHRSGQVVQFEALARWDRGAGR-VPPSDFIPLAERTGLIRDI 534 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 L ++ + DWL + PQ+ +++N+ L + + V RQ+ LE+ Sbjct: 535 GLEVMSQAMAQLADWLGEDPQRSLAVNVSGVQLQEHDFAAKVLGLAETRGVAARQLVLEV 594 Query: 395 TEREF--ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 TE F AD + S R+AG + LDDFGTGYSSL LQDL VD +KIDK+FV + Sbjct: 595 TESVFFHADCDLIRQL-STLRDAGARVALDDFGTGYSSLGRLQDLPVDTVKIDKTFVSMV 653 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK--- 505 E + +I MA +L L + AEGIET+ Q ++L QG+L+S P Sbjct: 654 RTGSERLPILSSMINMAHSLGLTVTAEGIETASQADYLTALDCDALQGYLFSLPEPAARL 713 Query: 506 EDFLRWAEQHL 516 E LR AE+ L Sbjct: 714 EKALRRAEEVL 724 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/251 (35%), Positives = 138/251 (54%), Gaps = 9/251 (3%) Query: 262 LRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 L + RR++S L+ AI+ ++ +HYQPIV + +I+ EAL RW D W+SP F Sbjct: 510 LALRRRLESD---LRKAIQRDELELHYQPIVDTQSRRIISFEALLRWNHADDGWISPVEF 566 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMI 380 IP+A+ G+ P+ ++R + M DW R P +++N+ + L + +P L+R M+ Sbjct: 567 IPMAEGNGMIGPIGEWVLRRACQQMRDWDRMGIPPVPVAVNMSALQLKRQDVPMLVRKML 626 Query: 381 NHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDV 439 V ++ LELTE D + I + G + +DDFGTGYSSL+ L+ V Sbjct: 627 TEAGVPSHRLELELTETTVMEDADAAQRIFADIAGLGVRLAVDDFGTGYSSLARLKRFPV 686 Query: 440 DILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQ 495 LKID+SFV L + II M + LK+VAEG+ET +Q L + G Q Sbjct: 687 GKLKIDRSFVGDLAEDEGDAAIARAIISMGHAMGLKVVAEGVETPEQLAILAEAGCDAIQ 746 Query: 496 GWLYSKALPKE 506 G+L+S+A+P + Sbjct: 747 GFLFSRAVPAD 757 >UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AF7_DECAR Length = 1094 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 139/251 (55%), Gaps = 9/251 (3%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 H L+ A+ + + +HYQPIV + +G++V AEAL RW + PD FI LA++TGL Sbjct: 835 HDLRSALADGQLLLHYQPIVEVESGRVVKAEALLRWRHPQRGMVPPDQFIHLAEETGLIH 894 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQ----HISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 + + + DW + P IS+N+ + D + ++PR Sbjct: 895 AIGDWVFQQAALTARDWAARMPAGAADCQISVNMSPRQFVKDGSEAGWLDYLKSIGLDPR 954 Query: 389 QIALELTEREFADPKTS-APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 I LE+TE D + A ++ +R +G +I LDDFGTGYS+++YL+ +D LKID++ Sbjct: 955 YIGLEITEGLLLDERLHVAERLAAFRASGIQISLDDFGTGYSAMAYLKKYPIDYLKIDRT 1014 Query: 448 FVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 FV L + + +I MA L LK VAEG+ET++Q + L+ G QG+ Y++ L Sbjct: 1015 FVRDLVSDSGDRAIAQAMIFMASQLGLKTVAEGVETAEQRDLLQSFGCDLIQGYYYARPL 1074 Query: 504 PKEDFLRWAEQ 514 P+++F+ + EQ Sbjct: 1075 PRDEFMAYLEQ 1085 >UniRef50_C5BT20 Ggdef domain/eal domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT20_TERTT Length = 991 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 143/248 (57%), Gaps = 7/248 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E + YQP V A+G++VGAE L RW + ++SP FIP+A++TGL + Sbjct: 739 LRIALEQNQFGIFYQPKVD-ASGRVVGAEGLVRWSHPEHGFISPSVFIPVAEETGLIHLI 797 Query: 335 TLLIIRSVFEDMGDW--LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 I+ ++ D+ W ++ P I+IN+ + + I + Q+++ Sbjct: 798 GEWIMEAIAGDLVRWQDMKIEPFGDIAINISAWQFGRADFIEKTLAGIRLNNIRVEQLSI 857 Query: 393 ELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE D T+ +++ R AG + LDDFGTGYSSL+YL+DL +D KID++FV+ Sbjct: 858 EVTETAILGDMGTTRVKLNQLRNAGISVMLDDFGTGYSSLAYLKDLPLDGFKIDRTFVEG 917 Query: 452 LEYKNVTP---HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 L P ++ + K ++LK+VAEG+E+ +Q + L+ G QG+L++K +P ++F Sbjct: 918 LGDAQAEPLVRSMLSIGKHMRLKVVAEGVESKEQFDKLKAMGCKLFQGYLFAKPMPVDEF 977 Query: 509 LRWAEQHL 516 L W + +L Sbjct: 978 LMWVKNNL 985 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 144/249 (57%), Gaps = 11/249 (4%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ A+E +++ + YQPI+ L +IVG EAL RW ++P FI +A++TGL P+ Sbjct: 619 LRQALERQELRLQYQPILCLNTDQIVGFEALVRWQHPRDGLIAPGHFITVAEETGLIVPI 678 Query: 335 TLLIIRSVFEDMGDWLRQHPQ---QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 +++ M W Q Q +S+NL S L+ + Q + M+ + P+Q+ Sbjct: 679 GEWVLQEACRQMQCWHTQFGQVLPLMVSVNLSSKQLSQPDLLQQVDRMLAETGLRPQQLK 738 Query: 392 LELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE D + + + + +E ++ +DDFGTGYSSL+YL L +D+LKID+SF+ Sbjct: 739 LEITESMILDNTEVARQTLLKLKERQIQLSMDDFGTGYSSLNYLHRLPIDLLKIDRSFIH 798 Query: 451 AL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL--- 503 + E + + II +A +LK++++AEGIET Q E L + G +GQG+L+S L Sbjct: 799 EMDSGEESRELVRAIISIAHSLKMQVIAEGIETRSQLEQLHELGCEFGQGYLFSTPLDPE 858 Query: 504 PKEDFLRWA 512 P DFL+ A Sbjct: 859 PAADFLQQA 867 >UniRef50_A6W234 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W234_MARMS Length = 655 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/254 (33%), Positives = 142/254 (55%), Gaps = 11/254 (4%) Query: 266 RRIQSPHHRLQ------DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPD 319 R IQ RL+ DA+ R I +HYQP VSL +G I+G EALARW L P Sbjct: 390 RNIQCGRQRLKLRADLDDALSERQIKLHYQPKVSLKDGHIIGVEALARWYHPTDGLLPPA 449 Query: 320 SFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDM 379 FI L +Q+G + +I + E + W +Q HI+INL L + + Sbjct: 450 HFIELIEQSGRVQEFGRYVITNAIEQLDLWHQQGLFTHIAINLSPYNLLDPSLLDFTLRL 509 Query: 380 INHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 + ++++ ++ +EL E + + + + ++ ++EAG ++ +DDFGTG SSLSY+ +L+ Sbjct: 510 LKNHKIEANKLEIELIESATSVNIEYISQSLNNFKEAGIKLAIDDFGTGMSSLSYISNLN 569 Query: 439 VDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 V+ +KID+SF+D +E + V ++ +A + + +++AEGIE Q E L + G YG Sbjct: 570 VNHIKIDRSFIDGVEQDIRKQAVVSSVVMLANSFECEVIAEGIENKSQSEMLIEIGCLYG 629 Query: 495 QGWLYSKALPKEDF 508 QG+ Y+K + E+ Sbjct: 630 QGYYYAKPMTAENM 643 >UniRef50_C4T5P6 Phosphodiesterase n=8 Tax=Yersinia RepID=C4T5P6_YERIN Length = 865 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 6/235 (2%) Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 + YQP V L +G I G EAL+RW + P FIP+A++ GL L L I + Sbjct: 626 LFYQPQVMLKDGNIYGVEALSRWMHPILGNIPPQRFIPIAEECGLINELALWAIETACHQ 685 Query: 346 MGDW-LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF-ADPK 403 + DW LR IS+NL ++ +P ++ ++ HY + P+ + LE+TE + + Sbjct: 686 LADWRLRGIDVPSISVNLSPTNFNNQGLPDMILHILQHYHLPPQDLTLEITEDILITNNQ 745 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY----KNVTP 459 II + G + +DDFGTGYSSLSYL+ LD+D +K+DKSFV LE+ + ++ Sbjct: 746 AIFAIIEKIHRLGVRLSMDDFGTGYSSLSYLRRLDLDEIKLDKSFVHDLEHDETSRTLSE 805 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +I + ++L+L ++ EG+E Q L + G GQG+L+S+AL +W EQ Sbjct: 806 AVIRIGESLQLSVIVEGVENEAQRTLLSRQGYKIGQGFLFSEALSAGKLEQWLEQ 860 >UniRef50_A6WEC0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WEC0_KINRD Length = 747 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 126/227 (55%), Gaps = 5/227 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L A++ ++ V YQP + L G +VGAEALARW + ++PD FIPLA+Q+GL + Sbjct: 488 LGRAVDRGELHVRYQPQIDLRTGAVVGAEALARWQHPELGPVAPDRFIPLAEQSGLIAGV 547 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 T +++ D+ W +S+NL + +L + +P L+ + + V + LE+ Sbjct: 548 TAVVLDRALADVARWRATGATPSVSVNLSARLLDDDHLPALVAAALQRHDVEADALVLEV 607 Query: 395 TEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE +DP+ + ++ R R G + +DD+GTG SL+YL DL VD LKID+SFV + Sbjct: 608 TETGIVSDPERAGAVVRRLRALGCAVAVDDYGTGQCSLTYLTDLAVDELKIDRSFVTGMT 667 Query: 454 YKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 I ++MA+ L L++VAEG+ + + L G H QG Sbjct: 668 TDRARAVIVRSTVQMARDLGLRVVAEGVADAATQRALADLGCHVAQG 714 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 139/244 (56%), Gaps = 7/244 (2%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 RIQ H L+ A+E + V YQPI+SL + +VG EALARW + + PD FIP+A+ Sbjct: 657 RIQLETH-LRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAE 715 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQV 385 +TGL PL +I +D+ W +++ +++NL L S + Q+ ++ + Sbjct: 716 ETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNF 775 Query: 386 NPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 P + LE+TE+ D T A ++ G + LDDFGTGYS+LSYL+ LK+ Sbjct: 776 RPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKV 835 Query: 445 DKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SF+ + E + I+ MA L ++ VAEG+ET++Q E+L+ G YGQG+ +S Sbjct: 836 DQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFS 895 Query: 501 KALP 504 + LP Sbjct: 896 RPLP 899 >UniRef50_Q2SEE7 FOG: EAL domain n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEE7_HAHCH Length = 569 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 136/242 (56%), Gaps = 8/242 (3%) Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 A+ ++ V++QP+V ++ +VG EAL RW D ++SP FIPLA++ G L+L Sbjct: 323 AMRDQQFEVYFQPLVDISKETLVGFEALLRWQHPDKGFISPARFIPLAEENGHIYDLSLW 382 Query: 338 IIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 +I V + + W R P+ ++IN+ L + + D+ Y + P LELTE Sbjct: 383 MIEQVCQQIVAWRRIGPRVRMAINISPAQLYRDDFTEDFVDIFTRYHLTPNDFELELTES 442 Query: 398 EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN- 456 DPK + + +R+ G +I +DDFGTG+S+L YL+ + LKID+SF+ + + Sbjct: 443 SLMDPKGGGQLQALWRQ-GFDIAIDDFGTGFSNLEYLKKYPFNRLKIDRSFISNICESSD 501 Query: 457 ---VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP---KEDFLR 510 + I+ +A+ + K++AEGIET +Q E LR+ G H QG+ +SK +P D LR Sbjct: 502 DIAIVKAILAIAEHMGFKVIAEGIETVQQLEKLRELGCHEAQGFYFSKPVPATIATDMLR 561 Query: 511 WA 512 + Sbjct: 562 YG 563 >UniRef50_Q21N07 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21N07_SACD2 Length = 855 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 145/250 (58%), Gaps = 13/250 (5%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AI + ++ ++YQPI+ L+ KIVG EAL RW G ++SP FIP+A+++GL L Sbjct: 603 LRSAIRDEELMLYYQPIIDLSTEKIVGCEALLRWIDRAGKFVSPVDFIPVAEESGLIYEL 662 Query: 335 TLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 I + F+ + W H ++IS+N+ L + + ++ +++ + V+PR I LE Sbjct: 663 GNWINATAFKQLKLWQTLHTDMKYISVNVSPHQLQNADFVKDIQRLLDIHNVDPRHIQLE 722 Query: 394 LTEREFADPKTSAPIISRYR---EAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 +TE F + S S+ R E G + +DDFGTGYSSL+YL+ VD++KID+SFV Sbjct: 723 ITEGTFL--QESLNTQSQLRILGEMGFRLAIDDFGTGYSSLAYLKRFAVDVIKIDRSFVM 780 Query: 451 ALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 LE +++ II M +L + EG+ET +Q + G YGQG+LY K + Sbjct: 781 DLEDDPADRDIVKAIIAMTTSLGFDTLVEGVETREQSLIVGALGCGYGQGYLYGKPTFAD 840 Query: 507 DFLRWAEQHL 516 D+ AEQ++ Sbjct: 841 DY---AEQYI 847 >UniRef50_A8IEV4 Putative sensory box/GGDEF family protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IEV4_AZOC5 Length = 546 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 136/251 (54%), Gaps = 10/251 (3%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 R L++ L AI N I YQP + L++ + G E LARW ++SPD+FI Sbjct: 278 RELKQTLRLQRDLHTAIANGAIVPFYQPFLRLSDNSLAGFEVLARWNHPIRGFISPDAFI 337 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMIN 381 P+A++ GL LT I+R D W PQ IS+NL L +P + + Sbjct: 338 PVAEEIGLIGQLTTAILRQACLDASKW----PQNLKISVNLSPVQLKEVSLPDQIYRTLR 393 Query: 382 HYQVNPRQIALELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 P+++ +E+TE + T+A I++ +R AG E+ LDDFGTGYSSL L+ V Sbjct: 394 TAGFPPQRLEIEITETGLVNDVTTARAILTNFRTAGIEVALDDFGTGYSSLQNLRSFPVT 453 Query: 441 ILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 LKIDKSFV ++ + K++ I+ M+K+L + AEGIE + + WL G YGQG Sbjct: 454 KLKIDKSFVRSMNTDPQSKSLVVGILAMSKSLGILTTAEGIEEAGEGVWLGSIGCDYGQG 513 Query: 497 WLYSKALPKED 507 + Y+K + E+ Sbjct: 514 YCYAKPMRGEE 524 >UniRef50_C3MGW2 Putative sensory box/GGDEF family protein n=2 Tax=Rhizobium RepID=C3MGW2_RHISN Length = 446 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/253 (35%), Positives = 137/253 (54%), Gaps = 10/253 (3%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 ++R L++AI +I VH+QPIV L N +VG EALARW + ++SP F+PL Sbjct: 186 MKRATQLEQALRNAIIAEEIDVHFQPIVDLRNDGVVGFEALARWCDPEFGYVSPSVFVPL 245 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHY 383 A++ G E L +++R + W P++ +S NL S L L +++ Sbjct: 246 AEERGFIEALAEMLLRKAAQTALAW----PKELFLSFNLSSAQLMDPATSGRLLAIVHQV 301 Query: 384 QVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 ++PR++ LE+TE AD + I+S R AG + LDDFGTG SSL L+D D + Sbjct: 302 GLDPRRLELEITETAVMADADVAQKIVSELRAAGVRVSLDDFGTGQSSLCRLRDFSFDKV 361 Query: 443 KIDKSFVDALEYKNVTPHIIE----MAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID++FV + + HI++ M + L+L++VAEGIE + L+ G GQG+ Sbjct: 362 KIDRAFVSRISADRASEHIVKAIVSMCEGLELEVVAEGIEDISEVLKLKALGCGMGQGYF 421 Query: 499 YSKALPKEDFLRW 511 Y K LR+ Sbjct: 422 YGKPADAVATLRY 434 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 88/252 (34%), Positives = 144/252 (57%), Gaps = 11/252 (4%) Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 RL+ A++ + + YQP++ + +G++ EAL RW D +SP +FIP+A++ GL E Sbjct: 807 QRLRKAVKQSEFYLEYQPVIDMHSGEVTSVEALVRWQDPDYGVISPQAFIPIAEEAGLIE 866 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQHISINLES-PVLTSEKIP--QLLRDMINHYQVNPRQ 389 PL I++ D+ W Q ++IN+ + + S I +L+ + + + Sbjct: 867 PLGEWILQQALSDLAQWHAQGLMLKMAINVSARQCIHSRDISFFDILKQTLAKHDIAAEN 926 Query: 390 IALELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + +E+TE + K + ++ G +IYLDDFGTGYS+LSYL + ++KIDKSF Sbjct: 927 LHIEITESMLIEDKPQCLQTLESIKQLGVDIYLDDFGTGYSALSYLTQCPISVIKIDKSF 986 Query: 449 VD-ALEY---KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 +D AL+ + I+ MA++L++ +VAEG+ET +Q +LR G Y QG+L SK L Sbjct: 987 IDNALDNPSDAKLIKAIVMMAQSLEMPLVAEGVETVEQWHFLRNLGCDYAQGYLMSKPLA 1046 Query: 505 KE---DFLRWAE 513 K +FLR A+ Sbjct: 1047 KAELVEFLRHAK 1058 >UniRef50_C8SP16 Diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP16_9RHIZ Length = 737 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 9/229 (3%) Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 I V+YQP+ + ++ G EALARW + W++PD F+PLA++ GL E L L++R Sbjct: 499 IQVYYQPLYTADTNRMAGVEALARWSHVERGWVAPDLFVPLAEEMGLVEQLGELVLRQAC 558 Query: 344 EDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK 403 D W P + +++N+ + L + + ++ Q++PR++ LE+TE + + Sbjct: 559 LDAVHW----PIETLAVNVSALQLNNPSFAMKVTSILLETQMDPRRLELEVTESTLSQHR 614 Query: 404 TSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VT 458 T + R G LDDFGTG+SSL LQ L+VD +KID+SFV + N + Sbjct: 615 TECQQNVEALRSIGVRFALDDFGTGFSSLGRLQTLEVDRIKIDRSFVQGFGHSNGDEAIV 674 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 II++A+ L AEG+ET Q +LR+ G QG+L S+ +PK++ Sbjct: 675 QAIIDLARATGLSTTAEGVETDSQRNFLRKLGCDQLQGFLLSRPVPKQE 723 >UniRef50_Q4C8D0 GGDEF n=3 Tax=Chroococcales RepID=Q4C8D0_CROWT Length = 595 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 142/247 (57%), Gaps = 11/247 (4%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ IE ++ V+YQPI++L K+VG EAL RW D ++SP FIP+A+ TGL P+ Sbjct: 346 LRYGIEKQEFEVYYQPIMNLNPIKLVGFEALIRWQHPDKGFISPGEFIPVAENTGLIIPI 405 Query: 335 TLLIIRSVFEDMGDWLRQHPQ---QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 +++ V + + W ++ Q I++NL S + I Q + +++ + + Sbjct: 406 GKIVLEKVCQQIQTWKKKFQQITILKIAVNLSSKQFKNAYILQEIDEVMERTGLTSNNLK 465 Query: 392 LELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE D + + ++ + ++ EI LDDFGTGYSSLSYL VD LKID+SF++ Sbjct: 466 LEITETSLIDHSQETIKLLKQLKQRNLEICLDDFGTGYSSLSYLHRFPVDTLKIDRSFIN 525 Query: 451 AL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP-- 504 + E + II +A L + +VAEGIET +Q +L++ +GQG+L+++ L Sbjct: 526 CIGQPEENLEIIQSIIHLAHNLGMNVVAEGIETEEQLIYLQKLNCDFGQGYLFNRPLTAQ 585 Query: 505 -KEDFLR 510 E+ LR Sbjct: 586 ETENLLR 592 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 132/240 (55%), Gaps = 6/240 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L DAIE ++ +HYQP +SL GKI+GAEAL RW + +SP FIPLA++ G + Sbjct: 477 LHDAIERQEFSLHYQPQISLITGKIIGAEALIRWHSLELGHVSPGEFIPLAEENGQILAI 536 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R + WL + I++NL +P ++ ++N Y V + + LE Sbjct: 537 GEWVLRETARQLKQWLEEGITPVRIAVNLSYAQFQVNDLPSIVEAILNEYAVPAQYLELE 596 Query: 394 LTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTER DP+ + I+ +++ G +DDFGTGYSSLSYLQ V LKID+SFV + Sbjct: 597 LTERIATKDPEHTITILESFQQLGIHTSIDDFGTGYSSLSYLQRFPVYKLKIDQSFVRNM 656 Query: 453 EYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + II +A+ L + +AEG+ET Q E L G QG+ S+ +P E+F Sbjct: 657 TTNTNDQVIVGTIILLAQQLGMTTIAEGVETKAQLEMLYNIGCDDIQGYYISRPIPAEEF 716 >UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YKOW_BACSU Length = 800 Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 138/242 (57%), Gaps = 5/242 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L++AIEN +HYQP S+ K+ GAEAL R DG P FI +A++TGL + Sbjct: 552 LREAIENDRFVLHYQPQFSVKKQKMTGAEALIRLVTPDGQLRPPGEFIGVAEETGLIIDI 611 Query: 335 TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 II + W + ++IN+ + S+ + L++D +N YQ+ P+ + +E+ Sbjct: 612 GKWIIDEACKQARIWHDKGYDLSVAINISARQFQSKDLIPLIKDTLNKYQLPPQLLEVEV 671 Query: 395 TEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE D S ++S E G I +DDFGTG+SSLSYL+D + LKIDKSF+D ++ Sbjct: 672 TESMTMDNLNHSKKVLSSLTELGIRISIDDFGTGHSSLSYLKDFPIHRLKIDKSFIDDIQ 731 Query: 454 Y----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + +T II M L L+++AEG+E + Q++ L + G + QG+ +S+ +P E F Sbjct: 732 THPKSEQITGAIIAMGHQLSLQVIAEGVENAAQKQLLFEKGCDHLQGFFFSRPIPPEQFE 791 Query: 510 RW 511 ++ Sbjct: 792 QF 793 >UniRef50_Q18BZ5 Putative signaling protein n=8 Tax=Bacteria RepID=Q18BZ5_CLOD6 Length = 965 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 148/256 (57%), Gaps = 7/256 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 +IL+ + + + DA+ N + V++QP SL++ +I+GAEAL RW + P FI Sbjct: 707 KILKE-KEIENSMVDALNNGEFIVYFQPKYSLSDYQIIGAEALVRWDNPQKGLIPPIEFI 765 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMIN 381 P+ ++ G + + V + + +W+ + + IS+NL + + + +++ Sbjct: 766 PVFERNGFIVNIDFYVFEEVCKKIREWMDEGQKVVPISVNLSRMHFVNSNFIEKFKLIVD 825 Query: 382 HYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 Y++ R I LELTE D + ++ +E G I +DDFGTGYSSL+ L++L VD Sbjct: 826 KYKIPTRLIELELTETAVLDNIEGLLDTMNNLKEKGFVISMDDFGTGYSSLNLLKELPVD 885 Query: 441 ILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 ILK+D++F + N V ++I+MAK LK+K+++EG+ET Q E+L+Q G QG Sbjct: 886 ILKLDRAFFTEKDESNNEKIVISNVIKMAKELKMKVISEGVETISQVEFLKQIGCDMVQG 945 Query: 497 WLYSKALPKEDFLRWA 512 +L+SK +P ++F + A Sbjct: 946 YLFSKPMPVKEFEKIA 961 >UniRef50_B8HNN4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=6 Tax=Cyanobacteria RepID=B8HNN4_CYAP4 Length = 584 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 13/258 (5%) Query: 262 LRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 L IL R+ + LQ A+++ + ++YQPI+ L +VG EAL RW + + + P F Sbjct: 326 LTILNRL-ILENDLQRALKHEEFILYYQPIIQLDTQTLVGLEALIRWQHPERNLVPPGEF 384 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRD-- 378 IP + TGL P+ L+ + + + W +Q +S+NL + P LL D Sbjct: 385 IPCMETTGLIVPVGLMSLTQACQQLSTWQQQGWTDLTLSVNLSTRQFAC---PSLLDDID 441 Query: 379 -MINHYQVNPRQIALELTEREFADPKTSAPIISR-YREAGHEIYLDDFGTGYSSLSYLQD 436 ++ +NP Q+ LE+TE D A +++ R +I +DDFGTGYSSL+YL Sbjct: 442 RILAETAINPSQLKLEITESAIMDNAEMAIGLAKELRSRQIQISIDDFGTGYSSLAYLHC 501 Query: 437 LDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 L VD LKID+SFV ++ N + II + L L ++AEGIETS+Q EWL++ Sbjct: 502 LPVDSLKIDRSFVSQIQTHNRNYQIVKTIIALGHQLNLAVIAEGIETSQQLEWLKKLDCE 561 Query: 493 YGQGWLYSKALPKEDFLR 510 +GQG+L+S LP + R Sbjct: 562 FGQGYLFSHPLPATEIER 579 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77473 Uncharacterized protein ylaB n=106 Tax=Enterobac... 712 0.0 UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Ent... 638 0.0 UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domai... 586 e-166 UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacte... 504 e-141 UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xan... 499 e-140 UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobac... 499 e-139 UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 498 e-139 UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 T... 496 e-139 UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria R... 482 e-134 UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=... 482 e-134 UniRef50_Q1LPF0 EAL-containing signal transduction protein n=3 T... 481 e-134 UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae Rep... 460 e-128 UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15... 444 e-123 UniRef50_B1JFI6 EAL domain protein n=8 Tax=Pseudomonas RepID=B1J... 441 e-122 UniRef50_B8KTI7 EAL domain protein n=2 Tax=Gammaproteobacteria R... 439 e-121 UniRef50_D0KJQ5 EAL domain protein n=4 Tax=Pectobacterium RepID=... 433 e-120 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 429 e-118 UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 T... 427 e-118 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 424 e-117 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 423 e-116 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 422 e-116 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 416 e-115 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 415 e-114 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 412 e-113 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 412 e-113 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 411 e-113 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 410 e-113 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 410 e-113 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 409 e-113 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 409 e-112 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 408 e-112 UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 408 e-112 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 407 e-112 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-112 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 406 e-111 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 406 e-111 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 405 e-111 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 405 e-111 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 405 e-111 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 404 e-111 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_C5D592 Diguanylate cyclase/phosphodiesterase with PAS/P... 404 e-111 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 404 e-111 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 403 e-111 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 403 e-111 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 402 e-110 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 401 e-110 UniRef50_C1DB08 Predicted signal transduction protein containing... 401 e-110 UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domai... 401 e-110 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-110 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 399 e-109 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 399 e-109 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 399 e-109 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 399 e-109 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 398 e-109 UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacill... 398 e-109 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 397 e-109 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 397 e-109 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 397 e-109 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 397 e-109 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-109 UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma p... 396 e-108 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 396 e-108 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 395 e-108 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 395 e-108 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 395 e-108 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillu... 395 e-108 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 395 e-108 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_A6V5X2 Cyclic diguanylate phosphodiesterase (EAL) domai... 395 e-108 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 394 e-108 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 394 e-108 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 394 e-108 UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella Rep... 394 e-108 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 393 e-108 UniRef50_Q8E9W7 Putative uncharacterized protein n=1 Tax=Shewane... 393 e-108 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 392 e-107 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 392 e-107 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 392 e-107 UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_A0YBW6 Predicted signal transduction protein containing... 392 e-107 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 391 e-107 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Ar... 391 e-107 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 391 e-107 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 391 e-107 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 391 e-107 UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=c... 391 e-107 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 391 e-107 UniRef50_Q0A9P4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 390 e-107 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 390 e-107 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 390 e-107 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 389 e-106 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 389 e-106 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_B1XJQ6 Two-component response regulator; GGDEF domain p... 389 e-106 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 389 e-106 UniRef50_A3YDR3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 388 e-106 UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 388 e-106 UniRef50_Q2SF23 Predicted signal transduction protein containing... 387 e-106 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 387 e-106 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 387 e-106 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 387 e-106 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-106 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 386 e-106 UniRef50_Q1H3Q9 Putative signaling membrane protein n=1 Tax=Meth... 386 e-106 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 386 e-106 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-105 UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-105 UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 T... 386 e-105 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 386 e-105 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 386 e-105 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-105 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 386 e-105 Sequences not found previously or not previously below threshold: UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 429 e-118 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 420 e-116 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 417 e-115 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 416 e-115 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 416 e-114 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 413 e-114 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 413 e-113 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 412 e-113 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 411 e-113 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 406 e-111 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 405 e-111 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 405 e-111 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 404 e-111 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 404 e-111 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 403 e-111 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 403 e-111 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 402 e-110 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 402 e-110 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 401 e-110 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 401 e-110 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 401 e-110 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 401 e-110 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 401 e-110 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 401 e-110 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 400 e-110 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 399 e-109 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 398 e-109 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 398 e-109 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 397 e-109 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 396 e-109 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-108 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-108 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 396 e-108 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 396 e-108 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 396 e-108 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 395 e-108 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 395 e-108 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 395 e-108 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 395 e-108 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 394 e-108 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 394 e-108 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 394 e-108 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 394 e-108 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 394 e-108 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 394 e-108 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 394 e-108 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 393 e-108 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 393 e-108 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 393 e-108 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 393 e-107 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 392 e-107 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 391 e-107 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 391 e-107 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 391 e-107 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 391 e-107 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 391 e-107 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 391 e-107 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 390 e-107 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 390 e-107 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 390 e-107 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 390 e-107 UniRef50_B8GNC0 Signal transduction protein containing a membran... 390 e-107 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 390 e-107 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 390 e-107 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 390 e-107 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 390 e-107 UniRef50_B1Y5R0 Response regulator receiver modulated diguanylat... 389 e-106 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 389 e-106 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 389 e-106 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 389 e-106 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 389 e-106 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 389 e-106 UniRef50_A0YP68 Hybrid signal transduction histidine kinase and ... 389 e-106 UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n... 389 e-106 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 389 e-106 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 389 e-106 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 388 e-106 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 388 e-106 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 388 e-106 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 388 e-106 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 388 e-106 UniRef50_A8FYM5 Signal transduction protein containing a membran... 387 e-106 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 387 e-106 UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Ta... 387 e-106 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 387 e-106 UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 387 e-106 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 387 e-106 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 387 e-106 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 387 e-106 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 387 e-106 UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 386 e-106 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-106 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-106 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-105 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 386 e-105 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-105 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 386 e-105 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 386 e-105 >UniRef50_P77473 Uncharacterized protein ylaB n=106 Tax=Enterobacteriaceae RepID=YLAB_ECOLI Length = 516 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 516/516 (100%), Positives = 516/516 (100%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK Sbjct: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP Sbjct: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA Sbjct: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH Sbjct: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV Sbjct: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI Sbjct: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY Sbjct: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS Sbjct: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL Sbjct: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 >UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Enterobacteriaceae RepID=D2TLT3_CITRO Length = 516 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 348/516 (67%), Positives = 415/516 (80%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M TRHLV L +GVLILS+++PVGLSIWLA +QVE FIEELD YS+ V R +V Q K Sbjct: 1 MTTRHLVSLAAGVLILSIIVPVGLSIWLAQRQVEKKFIEELDNYSALVYERTERVVQQAK 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 ALQE+E+ C+ HL+ MRR+S+SYRY+QEV Y+++N P+CSSLE ES FP P Sbjct: 61 KALQEIEKVDVTPCTHDHLLAMRRISFSYRYVQEVLYLEDNAPRCSSLEQESHSVVFPPP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 +IS DGYR W T HNDLGI RYM A+G Y+VMIDPASFIDV+P+ +WQID AIIG Sbjct: 121 QRISADGYRAWFTKHNDLGIERYMTALGKGRYIVMIDPASFIDVVPFGAWQIDVAIIGAK 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 N VI SSD + I+ Q+T +E +G IY I P PEM ISI++WAS L W+ Sbjct: 181 QNSVIASSDALPPAILQYTQQTTPRQLERHGNIYVIRPFPEMGISIVSWASRHPLDNIWY 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 RQ IW+P G+ GLLAA+ + RILRR+QSPHHRL+DAI NR+I VHYQP+VSLA+GK+V Sbjct: 241 RQALIWIPAGIAPGLLAAVLIFRILRRLQSPHHRLRDAIHNRNIKVHYQPVVSLASGKVV 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARWPQ DG +LSPD FIPLA+QTGL+EPLT LII +VFE+MG WLRQHP+QHISI Sbjct: 301 GAEALARWPQPDGCYLSPDFFIPLAEQTGLTEPLTRLIIETVFEEMGKWLRQHPEQHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 N+ES L SEK+P LL ++N +Q+ P QIALELTEREFADPKTS+PI++RYR+AGH +Y Sbjct: 361 NIESEDLASEKLPALLSTLLNRHQIAPSQIALELTEREFADPKTSSPIVARYRKAGHAVY 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 +DDFGTGYSSLSYLQ+L+VDILKIDKSFVDALEYKNVTPHIIEMAK LKLKM+AEGIET+ Sbjct: 421 IDDFGTGYSSLSYLQNLEVDILKIDKSFVDALEYKNVTPHIIEMAKALKLKMIAEGIETA 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 KQEEWLRQHGVHYGQGWLYSKALPK +F+ WAE+ L Sbjct: 481 KQEEWLRQHGVHYGQGWLYSKALPKAEFILWAEKRL 516 >UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=6 Tax=Enterobacteriaceae RepID=B5Y0R4_KLEP3 Length = 519 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 276/516 (53%), Positives = 363/516 (70%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MRTRHLV L +GVLIL+++LP+ LSIW A +Q + F ELD YS+R+ +R +VA Q + Sbjct: 1 MRTRHLVALFTGVLILAIILPISLSIWQAARQAKLQFYRELDDYSNRIVVRTLQVADQAR 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 +AL+E + A+CS HL+ +RR++Y++RYIQEV ++ ++VPQCSSLE S TFP P Sbjct: 61 EALREADSHTAASCSPEHLLTLRRIAYTHRYIQEVLWLRDSVPQCSSLEDHSVAVTFPPP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 I+ DGYR WLTS NDLG+ M AMG+ ++VMIDP SFIDV+P S +I + G Sbjct: 121 DHIAPDGYRTWLTSINDLGLNHQMTAMGSQQHMVMIDPISFIDVVPASEEKIHTMLFGLD 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 H ++ SS + + R++ + + +Y I +PE+ I+TW+ST LQ+ Sbjct: 181 HLKMVISSQPLPDTVWQRIKDPHVNMLTLDNTVYRIQRIPELGSGIVTWSSTLPLQQRIR 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 +Q+ WLP+G+ LLA +LR+LR ++SP + + DA+ + I V+YQPI+SL +GKI Sbjct: 241 QQLIFWLPVGIFTSLLATWLLLRLLRHLRSPRNSMLDALNSEAIQVYYQPIISLQDGKIA 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARW Q DG++LSPD FIPLA+QTGL LT I+R +F D+G WLRQ P+ HISI Sbjct: 301 GAEALARWQQPDGTFLSPDIFIPLAEQTGLITQLTEDIVRKIFTDLGPWLRQRPEVHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NL L S +P LL D + H+ + QI LE+TER F DP+T+ P+I+ YR+AGH I Sbjct: 361 NLSVDDLRSPTLPTLLHDQLQHWGIAAEQIILEITERGFVDPETTMPVIAHYRQAGHRIS 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 +DDFGTGYSSLSYLQ LDVD LKIDKSFVD LEY+ +TPHIIEMAK L L VAEG+ET Sbjct: 421 IDDFGTGYSSLSYLQKLDVDTLKIDKSFVDTLEYRPLTPHIIEMAKALNLATVAEGVETE 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 Q +WLRQHGV Y QGWLYSKALPKE F+ WAE +L Sbjct: 481 SQRDWLRQHGVQYAQGWLYSKALPKEQFILWAENNL 516 >UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacteriaceae RepID=C9Y1D6_CROTZ Length = 536 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 176/518 (33%), Positives = 280/518 (54%), Gaps = 8/518 (1%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 R R ISG+ I+ VLLPV L++W+AH + LDT++ V R V + + Sbjct: 4 FRARRQALRISGI-IMVVLLPVMLALWIAHHRAVNETRAHLDTFAQLVLNRTELVLSHVE 62 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 + E E++QG CS AH M +S +I+++ Y + CS+L P Sbjct: 63 ETRNEAEKYQGEICSSAHQRNMLDISRGQIFIEDLIYAQGDELLCSTLF--DQPFILSPA 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 + M+ + +YV +++P SF +++ S I + Sbjct: 121 NYTRTPDVAYYYYRDTPFFSGHKMIYLRKGNYVAVVNPLSFSEIL-SSDATISYGVYDTV 179 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 + S++ ++ + +G + I+ + I++ S + W Sbjct: 180 TREFFSVSEKADARAFAPFARSQNADFQKDGRFWSIVLSGKRPIAVAVSTSDAWFWQAWR 239 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 RQ+ + LPLGL++G L R R SP +LQ A++ R + +HYQPI+ + +G V Sbjct: 240 RQMSVMLPLGLIMGGLLVFLGSRTRNRFNSPGRQLQRALQKRALRLHYQPIMDIKHGMCV 299 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEAL RWP +G +SP FIPLA++TG+ +T ++ +F D+G +L HPQ +ISI Sbjct: 300 GAEALLRWPGYNGQVMSPAEFIPLAEKTGMIAQVTDYVVEELFNDLGHFLATHPQIYISI 359 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NL + S ++ L+ + + V +QI +E+TER F D + P+I +R++G EI Sbjct: 360 NLSASDFHSSRLIALIEGKNSQHGVRAQQIKIEVTERGFIDVPRTTPVIQAFRQSGFEIA 419 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEG 476 +DDFGTGYS+L L L+VDILKIDKSF+D L + + HII+MA++L+LK++AEG Sbjct: 420 IDDFGTGYSNLHNLYSLNVDILKIDKSFIDTLTTNSTSHLIAEHIIDMAQSLRLKIIAEG 479 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +ET++Q WL + GV Y QGW +SKALP+++F+ W +Q Sbjct: 480 VETAEQVGWLLKRGVQYCQGWHFSKALPRQEFVAWLQQ 517 >UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xanthomonas RepID=Q3BN81_XANC5 Length = 520 Score = 499 bits (1286), Expect = e-140, Method: Composition-based stats. Identities = 165/520 (31%), Positives = 261/520 (50%), Gaps = 12/520 (2%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M+ + ++ + +++LS LP+GLS +LA + L ++ R + Sbjct: 1 MKRQRIISVTVLLVLLSATLPIGLSYYLAWRLALAREEGRLSQLAALSIRRTETAFDEAH 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 AL + + CS HL +MR + + YI E+ C+S Sbjct: 61 GALLSMAASRLPPCSPPHLAQMRALVLTSHYIVELGRFQQGRLSCTSWGQLRNTIPQRTA 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 + K G V R ++A+ Y +I+P + D+ Q+ IG Sbjct: 121 DFVVKRGIAVTTRLLPLANPQRPLMALQLGDYNALINPDTLADINIPPGLQLA---IGTP 177 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEM--NISIITWASTKMLQKG 238 +++S+ A+ ++T P + ++ +L + + + + L+ Sbjct: 178 DGQILSSTGTAAERLLT---DPPATREPGDLLLSQVLFGRDRRGDWAAVVTEPVAYLRGP 234 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 +P+G+ + LL VL + RR SP RL+ A++ + VHYQPI++L +G Sbjct: 235 LAAARLQLVPVGIAVALLLVGAVLWVSRRRLSPLARLEIAVQRGEFIVHYQPIIALDSGA 294 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI 358 VGAEAL RW Q DG + PD+FIPLA+Q+GL P+T L++ V ++G L P H+ Sbjct: 295 CVGAEALVRWQQPDGVLVPPDAFIPLAEQSGLILPITDLVVAEVIRELGPTLAADPALHV 354 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE 418 +IN+ + + S ++ +L + V+ Q+ +E TER D + I+ R AGH Sbjct: 355 AINVSADDIKSGRVQGVLAQALRGTGVDSGQLWVEATERSLMDIDAARTTITHLRGAGHT 414 Query: 419 IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVA 474 + +DDFGTGYSSL YLQ L +D LKIDKSFVD + VT HIIEMAKTL+L+ +A Sbjct: 415 VSIDDFGTGYSSLQYLQGLPLDALKIDKSFVDTIGTHSATSAVTAHIIEMAKTLRLRTIA 474 Query: 475 EGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 EG+E +Q ++LR HGV QGWL+S+ALP F+ + Q Sbjct: 475 EGVERQEQLDYLRAHGVDLAQGWLFSRALPATGFIAYYAQ 514 >UniRef50_P32701 Uncharacterized protein yjcC n=108 Tax=Enterobacteriaceae RepID=YJCC_ECOLI Length = 528 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 170/517 (32%), Positives = 268/517 (51%), Gaps = 6/517 (1%) Query: 2 RTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKD 61 R RH + + G++ L VL P+ LS+W+A ++ +L T++ ++ V Q Sbjct: 4 RARHQLLALPGIIFL-VLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQADL 62 Query: 62 ALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPG 121 ER+QG C+ AH M + Y YI E+ Y +N CSSL T Sbjct: 63 VSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAPAD 122 Query: 122 KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH 181 + ++ M M +YV +I+P + +V+ + + Sbjct: 123 YKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDP-TLQWGVYDTVT 181 Query: 182 NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHR 241 + S E + + L ++ NG +Y + + I+ I S + L ++ Sbjct: 182 KTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFYN 241 Query: 242 QVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVG 301 + LP G++ L+ + LRI + SP +LQ A+E +C++YQPI+ + K +G Sbjct: 242 HLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCIG 301 Query: 302 AEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISIN 361 AEAL RWP G ++P FIPLA++ G+ E +T +I +VF D+GD+L H +++SIN Sbjct: 302 AEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGDYLATHADRYVSIN 361 Query: 362 LESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYL 421 L + + ++ + Y V P+QI E+TE F D PII +R+AG+E+ + Sbjct: 362 LSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVAI 421 Query: 422 DDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGI 477 DDFG GYS+L L+ L+VDILKIDKSFV+ L + HIIE+A +L LK +AEG+ Sbjct: 422 DDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEGV 481 Query: 478 ETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ET +Q WLR+ GV Y QGW ++KA+P + F++W EQ Sbjct: 482 ETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQ 518 >UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 Length = 530 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 154/519 (29%), Positives = 257/519 (49%), Gaps = 10/519 (1%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M+ H + ++ +++ P +++ + +L +++ R + + Sbjct: 1 MKRHHWLIATFACIVFAIIAPALAAVYTSSVVAAHREQIQLTLFATYAIERTDTTFSGVS 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 AL + + CS+ H+ +++R++ R I E+ Y D+ + +C+S P Sbjct: 61 QALMQTQMLTDKPCSKEHMDDLKRIAIETRPITEIGYFDDGLLKCTSWGMAGMRVAAGTP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 +++G +V L + M+ + Y ++IDP F+D I QI + + Sbjct: 121 AFTTRNGVKVVLNMTASIPTTANMLGLQRGAYCILIDPKWFVDEIVPKGVQIA---VASP 177 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 V+ + + +I + K + + + I+I AS + Sbjct: 178 DGTVVAALNHPDPAVIRQFLKPSDTKPPSRYLGAVVRGSDWTAIAITPRAS---IWTSMQ 234 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 ++ ++LP+ VI + + + RR S L AI R+ V YQP++ L G V Sbjct: 235 EELLVFLPIAGVISTGMVILTIWLSRRRLSLRGELAIAIRRREFTVVYQPLIELKTGICV 294 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEAL RW + DG+ + PD FIP+A+ + + +T ++ + D+GD L H++I Sbjct: 295 GAEALVRWRRPDGAMVMPDLFIPIAENSKMISQITEQVVANTVRDLGDVLAADEALHVAI 354 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 N+ L +I +++ I + QI LE TER F DPK++ II + RE GH I Sbjct: 355 NMADDDLAQGRILTVVQRAIRGTGIRTEQIWLEATERGFMDPKSTRTIIEKARELGHSIA 414 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEG 476 +DDFGTGYSSL YLQ+L VD LKIDKSF+ L + + HII MAK+L L +VAEG Sbjct: 415 IDDFGTGYSSLHYLQELPVDTLKIDKSFISTLGTDSATSPIAAHIIAMAKSLDLIIVAEG 474 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 IE +Q ++L HGV +GQGWLYS LP ++F+ + + Sbjct: 475 IERQEQADYLIAHGVQFGQGWLYSPPLPAQEFIEFYKAQ 513 >UniRef50_Q1LCJ1 EAL-containing signal transduction protein n=3 Tax=Proteobacteria RepID=Q1LCJ1_RALME Length = 529 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 168/526 (31%), Positives = 271/526 (51%), Gaps = 20/526 (3%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M+ + + + L+ L PVG+ +++A + ++L ++ RA V TQ Sbjct: 1 MQRSWFLVVTIVLTTLATLFPVGIGVFMAQLEANRREADQLSVFADAATRRAELVMTQAI 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFP-- 118 +ALQ++E + C+ A+L+++RR++Y+Y YIQ+ CS+L P P Sbjct: 61 NALQDMEMLREEPCTPANLVQLRRITYTYSYIQDAGIYRAGKRLCSALLGPIEPGQLPLP 120 Query: 119 EPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG 178 P + DG W R++V +G V +D F+DV+ S + A++ Sbjct: 121 PPDWRTPDGLDYWFDQPVPFNAQRHVVLIGRNGNNVGLDSQVFVDVVDRESRML--AVVQ 178 Query: 179 NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYD--------ILPLPEMNISIITWA 230 + +++ +TRLQ+ EH +G + M ++++ A Sbjct: 179 TDAGRIFSATQGAN---LTRLQQAYSEHSYGSGADAAQEDDASIVLRKSRNMPLAVVVLA 235 Query: 231 STKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQP 290 L W + L +GL G+ + V R R S L+ A+ ++ VHYQP Sbjct: 236 PRAALLANWKSLLIGGLVVGLSAGVPLGILVWRRATRRFSLEGELRSAVRRHEMAVHYQP 295 Query: 291 IVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL 350 I SLA+ VG EAL RW + +G + P+ FIP+A+ GL + +T ++ + ++G L Sbjct: 296 IASLADNHWVGVEALVRWRR-NGRLVRPNLFIPMAENAGLIQQITDQVLDIILSELGTLL 354 Query: 351 RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIIS 410 R+ P ++SIN+ L S + +L + + P+QI +E TER F +P + I Sbjct: 355 RRFPSFYVSINVGVEDLKSRRFLSVLNARLRGSGIAPQQIRIEATERGFLEPDVARDTIQ 414 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAK 466 +R+AGH +Y+DDFGTGYSSLSYLQ VD LKIDKSFVD + + V PHII MA+ Sbjct: 415 AFRDAGHPVYIDDFGTGYSSLSYLQSFKVDALKIDKSFVDTIGQEAASSTVAPHIIAMAQ 474 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +L L+++AEGIE Q ++LR+ GV YGQGWL+ + +P + + Sbjct: 475 SLGLQVIAEGIEDKMQADFLREQGVDYGQGWLFGRPMPAVELAQLM 520 >UniRef50_A5VAG1 EAL domain protein n=2 Tax=Alphaproteobacteria RepID=A5VAG1_SPHWW Length = 537 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 175/517 (33%), Positives = 260/517 (50%), Gaps = 10/517 (1%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MR R ++ + + + IL+ LLP+ L + + ++ Y+ IRAN+V + Sbjct: 1 MRRRTILIIAACLAILAGLLPMVAVAHLLRVRAVAAEQRHMEEYARWTLIRANQVFADAR 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 L E G CS H+ +R+++ R ++++ Y + C+SL P Sbjct: 61 RTLLAAEVPPGTECSPEHVARLRQIAMDARSVEDIGYFRDGRLACTSLGPVGQRVPRTPP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 G+ V + M+AM Y +I P +DV+ S + I Sbjct: 121 DLRLGGGFAVIFHLQPRTFRSQPMLAMSHGGYTALIKPERLVDVLTDSHMTLG---IAAG 177 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 +I S ++ L P I+++ + + P + ++ Sbjct: 178 PGRLIALSGRTDPQLLRTLIAGPTAGIDDHHVFASLREAPLTAFA---FSDRAQALGRLR 234 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 + LP+GL++ L V+ + R+ SP L AI R+ VHYQPI+ L+NG+ V Sbjct: 235 NDYLLLLPMGLLVSTLLVGLVIWVSRQRLSPEKELAIAIRKREFVVHYQPIIDLSNGRCV 294 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 AEAL RW + DG W+ PD FIPLA++TGL PLT L+I V ED LR HISI Sbjct: 295 AAEALLRWRRPDGRWIGPDLFIPLAEETGLISPLTDLLIERVIEDQAALLRADRDLHISI 354 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 N+ + L S + +L + + V P QI +E TE+ F + +A + R AGH + Sbjct: 355 NISARDLESGRFLPVLTEAVTRSGVAPSQIWIEATEQGFIRAEIAAGAVEAARAAGHMVA 414 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEG 476 +DDFGTGYSSLS LQ L +D LKIDKSFV+A+ VTPHII+MA LKL+++AEG Sbjct: 415 IDDFGTGYSSLSLLQGLPLDALKIDKSFVEAIATDAATSVVTPHIIDMAHGLKLRIIAEG 474 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +ET +QE +LR GV QGWLYS ALP +F + + Sbjct: 475 VETREQEAYLRAAGVRLAQGWLYSHALPASEFATFHQ 511 >UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=B4SIA4_STRM5 Length = 538 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 155/519 (29%), Positives = 277/519 (53%), Gaps = 10/519 (1%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M ++ + + +L+ +P+ + + + + + L + R R+++ Sbjct: 1 MSRLRIIIGGTALALLAAAVPIAVMAYATWDRAVSVEQQRLRDIAGRALRRSDQSYHDAL 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 AL+ E CS H+ M+ + + I ++ Y + +C+S P+ Sbjct: 61 AALKSAEAGAHVPCSPDHIQRMQTLVMTTPSIDQMGYFEGGTLRCTSWGPFLADVKQPKA 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 ++ +G + + + R ++++ Y V++DP F+DVI + ++ + + Sbjct: 121 DHVTSEGAGIAVDVRPEASGRRQVLSILYGAYDVLVDPRRFVDVIADPNVRLA---LASP 177 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 ++ D + ++ L + PGE +++N +Y E ++I T T L + Sbjct: 178 DGRLLAKQDGMDPALLETLLRNPGEGLDHN-TLYATARNGEW-LAIATTPRTA-LAATFR 234 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 +Q ++++PLGL++ + A V+ + RR S L AI R++ +HYQPI+ L G V Sbjct: 235 QQAWLYVPLGLLMAAVGAGLVIWLSRRRLSLRGELATAIRRRELYLHYQPIIELDTGICV 294 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEAL RW + DG+ + PD FIPLA++TG+ +T L+I +V DM + L HI+I Sbjct: 295 GAEALIRWQRQDGTQVRPDLFIPLAEETGMIGAITDLVIENVVRDMRELLVADRSAHIAI 354 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NL + ++S + +L+ + + P+QI +E TE F D + ++++ R AGH + Sbjct: 355 NLAAEDISSGRALKLIAKHMAGSGILPQQIWMEATEHGFLDLDRARTMLAQARRAGHSVA 414 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEG 476 +DDFG G+SSL YL+ L +D LKIDKSF+DA+ ++ VTPHII+MAK L L +VAEG Sbjct: 415 IDDFGVGFSSLQYLEQLPLDALKIDKSFIDAIGTESATSPVTPHIIDMAKELGLWVVAEG 474 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +ET Q +L V + QGWL+S+ LP+++F+ + ++ Sbjct: 475 VETEAQLAYLHTRKVEFAQGWLFSRPLPRDEFVVFHQKR 513 >UniRef50_Q1LPF0 EAL-containing signal transduction protein n=3 Tax=Burkholderiaceae RepID=Q1LPF0_RALME Length = 530 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 165/521 (31%), Positives = 270/521 (51%), Gaps = 12/521 (2%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 ++ +V + L+ ++PV S+++A + VE E+ ++++ +RA V +Q Sbjct: 2 IKRITVVSASVALGCLATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQAF 61 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEH--ESPPDTFP 118 AL +L++ GA CS +L RV Y+YRY+Q+ + + CS L + T P Sbjct: 62 AALNDLDQQPGAPCSPPNLEHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRAKDLTLP 121 Query: 119 EPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG 178 P + +GY +W + L R + +G V ID S++D+I + I A I Sbjct: 122 PPDYQNNEGYSMWFRRKSPLSNERNDLQIGRNGRYVSIDRGSYVDLIDPAKRPIAAIQIP 181 Query: 179 NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKG 238 + +++ G + K G +++++ Y + I+++ + + Sbjct: 182 TGTLIAVSTG--ADPGDMLNAWKQSG-NVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGN 238 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 W + + WL +G+ G L + + S L+ AI R I V YQPI+ +A+ + Sbjct: 239 WPKLLAAWLSIGVTAGALLGWLAYKRISWQFSFPATLEWAISRRKIDVVYQPIIRIADNE 298 Query: 299 IVGAEALARWP-QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH 357 VG EAL RW G +SP+ F+ +A++ L + LT +++ +G L +P + Sbjct: 299 CVGVEALTRWTLH--GQSISPEVFVRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFY 356 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGH 417 +SIN+ S L S + L + + PRQI +E TER F + + + +I+ +R AGH Sbjct: 357 VSINVSSEDLRSVRFLNQLTSSLAGTGIAPRQIRIEATERSFMNTEETRGVIAAFRAAGH 416 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMV 473 IY+DDFGTGYSSLSYLQ ++D+LKIDKSFVD +E V PHII MA + L++V Sbjct: 417 PIYIDDFGTGYSSLSYLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIV 476 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 AEG+E++ Q WL + GVHY QGW Y+KA+ W + Sbjct: 477 AEGVESAVQIAWLLERGVHYAQGWYYAKAMTASTLAPWLSR 517 >UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae RepID=B2I7U8_XYLF2 Length = 530 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 146/523 (27%), Positives = 261/523 (49%), Gaps = 16/523 (3%) Query: 2 RTRHLVGLISGVLILSVLLPVGLS-----IWLAHQQVETSFIEELDTYSSRVAIRANKVA 56 R + LI G + L V ++ +W+ Q+ E + +L + ++ R ++ Sbjct: 8 RLKRCWTLIVGATLCIACLSVSIALTDGYVWVTTQRHEQQRLRDL---AQQMGQRVDRAV 64 Query: 57 TQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDT 116 ++ L +++ A CS H+ MR + + RYI E+ Y C+S Sbjct: 65 SESLLLLSDMDHAHLAPCSPEHIARMRALVLATRYITELDYAPTQKLSCTSWGPFDGAFK 124 Query: 117 FPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAI 176 DG + L + ++ + Y ++ ++F+D ++ A Sbjct: 125 QTLTSDTRNDGLELVKRVSLPLNPEQRLLGLHHGDYHALMKLSTFMDFPIPPGVELALAT 184 Query: 177 IGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQ 236 + +++++ + + + ++ + ++ ++ + P + I + L Sbjct: 185 MDGV--LLLSTGSHVKELFSNPVNQSASD--PSHDVVAARIQNPHHDWQIAVIEPIQQLV 240 Query: 237 KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLAN 296 HR+ ++ +P+ L++ L + + LRR ++P RL+ AI+ + V YQPIVSL++ Sbjct: 241 GAVHRKEWLAIPVALLVSLSVSGLAILYLRRRRAPLARLRQAIQRCEFFVCYQPIVSLSD 300 Query: 297 GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ 356 G+ VGAEAL RW Q DG+ + PD FIPLA+++GL P+T +I + ++G L Sbjct: 301 GRCVGAEALVRWRQQDGTLILPDQFIPLAERSGLILPITDQVIAASMRELGPLLVADRSL 360 Query: 357 HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAG 416 HI+IN+ + S ++ +L + + +Q+ +E TER F D + + I R REAG Sbjct: 361 HIAINVSVKDIESGRLLDVLALALQDTGLYRKQLWIEATERSFMDARAAREHIVRLREAG 420 Query: 417 HEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKM 472 + + +DDFGTGYS+L YLQ L +D LKIDKSF+D + V HII++AK L ++ Sbjct: 421 YAVVIDDFGTGYSNLQYLQQLPLDALKIDKSFIDTVGRDVTNTAVASHIIDIAKELGMRT 480 Query: 473 VAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +AEG+E +Q +LR GV QGWL+S L +F+ + + Sbjct: 481 IAEGVEREEQLVYLRARGVDMAQGWLFSSPLSVAEFVDYLSHN 523 >UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15_SYNE7 Length = 525 Score = 444 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 149/508 (29%), Positives = 245/508 (48%), Gaps = 8/508 (1%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M+ R+ + G + ++ LP +SI +A ++ + + + + K A Q Sbjct: 1 MKKRNALIFAVGTSVFAIALPTLISINIASREALIGEQNYMLATARGLLRSSEKAADQVD 60 Query: 61 DALQELERWQG-AACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPE 119 +EL Q C + MR++ + YIQ + Y+ N CSS+ +S Sbjct: 61 KGFKELRALQSVQTCDPEQIQVMRKIDLASAYIQAIGYVSGNKLVCSSMGKDSLD--LGP 118 Query: 120 PGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN 179 + G ++ D + + + +I +D+ I + Sbjct: 119 VDIVQPSGAKLRRNVEFDFAKGLKFIVIERDSFAAVIQKDVPLDI-SKDIENISITTLSK 177 Query: 180 AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGW 239 ++ +T+ I I+ L + G I + + + L Sbjct: 178 SNPETLTARGFIDPKWISALNNQQESTFIDKGHIIAAVSSQRYFLGAVVATPVTGLASRT 237 Query: 240 HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 +I +P+G++ G++ + V+ LR + ++ AI+ R+ + YQPIV+L G Sbjct: 238 RAIAWIIVPVGILAGIILWLSVIYFLRGQLALPAVIKTAIKRREFFLTYQPIVNLQTGDW 297 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHIS 359 VGAEAL RW + DG ++PD FIP+A+ +GL + +T I+ ++ + + + P+ HI Sbjct: 298 VGAEALVRWKRPDGKTMAPDIFIPVAEDSGLIQLITEYIVETLSREAIGFFDEFPRFHIG 357 Query: 360 INLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEI 419 INL + L + + L+R + P + +E TER F DPK + +IS R G ++ Sbjct: 358 INLSAADLHTPQTVSLMRKVAKATSAKPGSLIVEATERGFTDPKLANGVISSLRADGIQV 417 Query: 420 YLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAE 475 +DDFGTGYSSLSYL++L++D LKIDKSFVD + NV HIIE+AKTL L MVAE Sbjct: 418 AIDDFGTGYSSLSYLENLELDYLKIDKSFVDTIGRDTATSNVVTHIIEIAKTLDLMMVAE 477 Query: 476 GIETSKQEEWLRQHGVHYGQGWLYSKAL 503 G+ET Q +LR GV Y QGW ++K + Sbjct: 478 GVETELQANFLRNRGVQYAQGWFFAKPM 505 >UniRef50_B1JFI6 EAL domain protein n=8 Tax=Pseudomonas RepID=B1JFI6_PSEPW Length = 542 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 148/502 (29%), Positives = 241/502 (48%), Gaps = 25/502 (4%) Query: 25 SIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRR 84 SI +A QQ++ S +++ R R +V Q ++ + +L+ C+ A L +++ Sbjct: 37 SIGIALQQMKQSESAQMNAQGERFLDRLEQVFGQLREGVDDLQAQPLRGCNPAMLALLQQ 96 Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYM 144 V R+I E AY+D N CS+ P Y WL + + Sbjct: 97 VGLGSRFIYEAAYVDVN-VACSNRGGARAFVPTRAPDIQGPT-YSYWLNTTTEPNENLAA 154 Query: 145 VAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPG 204 + + +++V DV+ G + VV+ + + P Sbjct: 155 LMLARGNFLVSTSRGHLTDVVDLPP--------GGSLLVVLDNGTRAIPVLGPPQVWPPA 206 Query: 205 EHIE----------NNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIG 254 EH ++ ++Y +L + ++ A L + +++ P ++ Sbjct: 207 EHWPPPSGNSLFELHDRLVYRMLTKSP-DYQLVLIAPRASLPLRMNGMLWLLFPGSVLAA 265 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 VL+++ + +S LQ+A+ ++ V YQPI+ L + + VGAEAL RW + DG+ Sbjct: 266 CCIGWLVLQLILQRRSMSSELQNALRRGELQVLYQPIIELDSRRCVGAEALVRWRRPDGT 325 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQ 374 SPD FIPLA+ TG +T +++ V E +G LR H +IS+NL + + +I + Sbjct: 326 LTSPDLFIPLAENTGQIRQITDFVLQRVLEQLGQLLRSHRNLYISVNLAACDVMVPRIGR 385 Query: 375 LLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + ++ ++V QIA E+TER D + + R GH++ +DDFGTGY SL+YL Sbjct: 386 VAARLLALHRVAASQIAFEVTERGLIDVVVARDNLQALRAVGHQVLIDDFGTGYCSLAYL 445 Query: 435 QDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 Q L VD LKIDK+F+DAL + V PHII MA L L+++AEGIE Q L G Sbjct: 446 QTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHDLHLRVIAEGIECEAQAVLLNSEG 505 Query: 491 VHYGQGWLYSKALPKEDFLRWA 512 V+YGQGWL++ L F+ Sbjct: 506 VNYGQGWLFAHPLNARQFVELV 527 >UniRef50_B8KTI7 EAL domain protein n=2 Tax=Gammaproteobacteria RepID=B8KTI7_9GAMM Length = 528 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 157/512 (30%), Positives = 250/512 (48%), Gaps = 10/512 (1%) Query: 6 LVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQE 65 +V +++ V ++ +L +G W A +Q + L + R+ RA V T + L+ Sbjct: 20 IVLMVAMVGVIGLLSALG---WYAWRQSIGAEEARLGALAERLGQRAETVLTDARTLLEM 76 Query: 66 LERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISK 125 L A CS+ H+ M+ + + Y++ V QC + P+ KI Sbjct: 77 LNNSTVARCSDKHIRTMQEEAIARPYVRAVGSWRAAERQCGVGFIQGNALKPPKASKIYP 136 Query: 126 DGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVI 185 +G W + + M + + ID +D + + G ++ Sbjct: 137 NGVVAWWPGPDTALGNVELFIMRLGEHDLAIDTRLVLDQRLSGEQRAGLWVDG---LLLA 193 Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFI 245 S + T L + E+N I+ + ++ S+ + + + Sbjct: 194 NSPPDAVLPEPTTLSRGLNIAPESNTIVARFSLDTIFPMDVVAVQSSGHFFSRYAKTLAA 253 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 LGL++ L +FV + +R S L+ AI++ I YQPIV L G+ VGAE L Sbjct: 254 AGVLGLLLMGLWFLFVKHLSKRHLSLTAELRSAIDHDGIDAVYQPIVDLNTGRCVGAEIL 313 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESP 365 ARW ++DG + PD F+ +A+Q G+ +T + R D+G LR+ I++NL Sbjct: 314 ARWERSDGEMIRPDLFVAIAEQQGIIGGITHNVFRRAIGDLGKLLRKQSDLRINLNLSPL 373 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFG 425 L I LL + ++ LE+TER D + + +IS R+ GH+I +DDFG Sbjct: 374 DLEDNAIADLLETELRKARLPAATFKLEITERGLIDSEEARALISALRQRGHQIAIDDFG 433 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDALEYKNVT----PHIIEMAKTLKLKMVAEGIETSK 481 TGYSSLSYL+ ++D LK+DK+FVDA+E + VT PH+IEMA++L+L MVAEGIE+ Sbjct: 434 TGYSSLSYLESFELDTLKLDKAFVDAIETRAVTSSVIPHVIEMARSLELDMVAEGIESEH 493 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 Q +WLR+ GV GQG+LYSK L DF + + Sbjct: 494 QAQWLREQGVQMGQGYLYSKPLSAADFKAYLK 525 >UniRef50_D0KJQ5 EAL domain protein n=4 Tax=Pectobacterium RepID=D0KJQ5_PECWW Length = 540 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 158/484 (32%), Positives = 257/484 (53%), Gaps = 6/484 (1%) Query: 35 TSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQE 94 F E+++T+S+ A ++ Q AL +LE ++ C + HL +R+V+Y YIQ+ Sbjct: 46 KQFEEDVETFSTLTLEHAGEIMAQATSALDKLEEYRLPYCEDPHLNMLRKVAYDNDYIQD 105 Query: 95 VAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVV 154 V YID N P+CSS+ ++ P+P + K Y VW + L + M+ +G H+ V Sbjct: 106 VVYIDGNRPRCSSMLNDINTLFLPKPDFVYKSVYGVWYNVESPLNRNKRMIYVGATHHFV 165 Query: 155 MIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL--QKTPGEHIENNGI 212 +++P SF+D+ +S + N + SD I + RL + + + Sbjct: 166 VLNPRSFLDIPSHSHNIRCTLLERKKKNGQVILSDSIDGSVFPRLITGENRADRFYIDSK 225 Query: 213 IYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPH 272 Y + PL N++++ A + + F LPL + LL + + R IQSP Sbjct: 226 YYVLKPLSNSNLALVVSADKPVSTTRYLTIFFSSLPLFFLFSLLLSTLISRRTLTIQSPR 285 Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 + L A++ ++ +HYQPI+ L ++VG EAL RW +DG + PDSFIP+ +Q GL + Sbjct: 286 YVLNQALKQKEFKLHYQPIIELNTAQVVGCEALIRWCHSDGRVIMPDSFIPMIRQVGLMK 345 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 +TL +I + + +P+ +SINLE+ I L + I + + I + Sbjct: 346 AMTLYVIDEALQTACVLKKSYPEMFVSINLEAAEFEDISIFNYLVEYIAVHGLEGTNINV 405 Query: 393 ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 ELTE +P+ + ++ Y++ ++ +DDFGTGY+ LSYL+ + + LKIDKSFV + Sbjct: 406 ELTESSMIEPQKAGLMVELYQQKSIDVAIDDFGTGYAGLSYLERVKANKLKIDKSFVWNI 465 Query: 453 EYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + V HI+ MA L ++VAEG+ET QE +L+ GV Y QGWLYSKAL +E Sbjct: 466 NNHSPGDIVLSHIVSMAHCLNQQIVAEGVETLIQETYLKSLGVAYAQGWLYSKALTQEAL 525 Query: 509 LRWA 512 + + Sbjct: 526 IVFL 529 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 18/330 (5%) Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIW 246 D+I + E I + P + S++ A M Q K R + + Sbjct: 617 DKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQF 676 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + L R + L+ A++ ++ ++YQP V + GKIVG EAL Sbjct: 677 YTPTMNAQTL----------RRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALI 726 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW +SP FIP+A++TGL P+ I+R W + +++NL + Sbjct: 727 RWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSAR 786 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDF 424 +PQ + +++ + P+ + LE+TE D + + R+ G + +DDF Sbjct: 787 QFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDF 846 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSL+YL+ L +DILKID+SF+ L ++ + II + LK+K+VAEG+ET Sbjct: 847 GTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETK 906 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 +Q +LRQ QG+L++K LP + + Sbjct: 907 EQLMFLRQQQCDLMQGYLFTKPLPVRELEQ 936 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 97/333 (29%), Positives = 158/333 (47%), Gaps = 18/333 (5%) Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIW 246 I GI L E ++ I + P +I A M K R F + Sbjct: 620 QRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRNNFQF 679 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + R L R++ L++A+E + +HYQP + L GKIVG EAL Sbjct: 680 YTSSMN---------ERALERLR-LEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALI 729 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW + + P FI LA++TGL P+ +IR W +S+NL + Sbjct: 730 RWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSAR 789 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDF 424 + + + + + Q+ P+ + +ELTE AD + I+ + G ++ +DDF Sbjct: 790 QFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDF 849 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYL+ +D+LKID+SFV+ + + + II +A +L+L ++AEG+ET Sbjct: 850 GTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETE 909 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +Q +L+QH QG+ +S+ + + + Sbjct: 910 EQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 >UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 Tax=cellular organisms RepID=Q1LGY0_RALME Length = 536 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 146/528 (27%), Positives = 240/528 (45%), Gaps = 27/528 (5%) Query: 4 RHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDAL 63 +V + L L+ +LPV S+W++++ + ++ V R + + Q Sbjct: 6 TRIVTYAA--LALAFMLPVCASVWMSYRLALSEQQLHTGILAAEVLYRVHVFSEQNLRIN 63 Query: 64 QELERW-QGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGK 122 L R + CS ++ MR ++ Y+Q V Y++ NV QCSS + P Sbjct: 64 AALRRHGATSPCSPDNVALMRNLAVGASYLQVVGYVEGNVLQCSSYGYGDGDAGIPIGPP 123 Query: 123 ISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDA-------- 174 + W+ + L + Y+ + D + + +D Sbjct: 124 AYRSRLGNWVRTSVKLPFDE------SRRYIALTDSVTGYSSLALPDMLLDTGGGGHGFA 177 Query: 175 -AIIGNAHNVVITSSDEIAQGIITRLQKTPGE-HIENNGIIYDILPLPEMNISIITWAST 232 A++ ++ ++ D I G + L + G ++ G + P + + + + Sbjct: 178 IALVAISNRQIVVQRDPIDLGGMPPLIRERGTITWQHRGATGSVSLSPSRDYAAVVMSPA 237 Query: 233 KMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 L W +P G ++G LRR +L A+ + ++ + Y PIV Sbjct: 238 SALHANWRNVATWLVPFGALLGGALVALARLGLRRRHGLLRQLDRALRDDELSLAYMPIV 297 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW-LR 351 L +GK +GAEAL RW DG W++PD FIPLA++ LT ++ + D Sbjct: 298 ELESGKWIGAEALMRWCH-DGQWIAPDKFIPLAERHHRIRKLTNRMLDLLVADAQALPRD 356 Query: 352 QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISR 411 + S+NL + L + I Q + D+ V+ + +E TE + P I R Sbjct: 357 LARAMYFSVNLSAEDLAACAIAQRVADVRQACGVDG--VMVEATEGVLLEASRVIPNIER 414 Query: 412 YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKT 467 R+ G + +DDFGTGYSSLSYL LDVD +KIDKSFV A+ + V HII+MAK Sbjct: 415 LRKLGIRVAIDDFGTGYSSLSYLGSLDVDYIKIDKSFVSAIGTNSVRGHVVAHIIDMAKD 474 Query: 468 LKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + + ++AEG+ET +Q ++L GV Y QGWL+ KA+P +DF+ H Sbjct: 475 VGVAVIAEGVETQEQADYLMARGVRYAQGWLFGKAMPMQDFVSAIRMH 522 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 17/302 (5%) Query: 218 PLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 E +++ A M K R F + + RIL R++ + L+ Sbjct: 786 RDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMN---------ERILERLE-LENSLR 835 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 A+EN ++ +HYQP VSL +G+++GAEAL RW +SP FIPLA++TGL P+ Sbjct: 836 RALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGE 895 Query: 337 LIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 ++ + WL PQ +++N+ + E++ +L + +++ P Q+ +E+T Sbjct: 896 WVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVT 955 Query: 396 EREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL-- 452 E +P+ + + + G I LDDFGTGY SL+YL+ +D +KID+ FV L Sbjct: 956 ESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLAT 1015 Query: 453 --EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 E + I+ +A +L ++AEG+E Q ++LR+HG QG+L+S+ LP +F R Sbjct: 1016 SAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFAR 1075 Query: 511 WA 512 Sbjct: 1076 LL 1077 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 98/384 (25%), Positives = 181/384 (47%), Gaps = 24/384 (6%) Query: 144 MVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVIT-----SSDEIAQGIITR 198 +G + V++ + + + + G+ + +T + EIAQ IIT Sbjct: 431 NDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFLTGVTHREAGEIAQRIITS 490 Query: 199 LQKTPGEHIENNGII----YDILPLPEMNI-SIITWASTKM-LQKGWHRQVFIWLPLGLV 252 + ++ I + P +I +++ A M L K + + + L Sbjct: 491 MSESITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEEL- 549 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 ++L + L+ A++ + +HYQP + L G+I+G EAL RW D Sbjct: 550 ---------HQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPD 600 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEK 371 + P FIP+A++TGL PL ++R+ + W Q +++N+ Sbjct: 601 LGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNN 660 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 + +++ ++ + P+ + LE+TE + + I++R + G I +DDFGTGYSSL Sbjct: 661 LIEMITSILEETGLAPQYLELEITESMALNVDYTIRILNRLKALGVSISIDDFGTGYSSL 720 Query: 432 SYLQDLDVDILKIDKSFVDALE--YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 SYL +D LKID+SF+ L + + II MA +K+ ++AEG+ET + ++L++ Sbjct: 721 SYLSQFPIDRLKIDQSFLRNLNPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQ 780 Query: 490 GVHYGQGWLYSKALPKEDFLRWAE 513 + QG+ YSK LP ++ + + Sbjct: 781 LCNEVQGYFYSKPLPTKEIDSFLQ 804 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 101/360 (28%), Positives = 172/360 (47%), Gaps = 18/360 (5%) Query: 164 VIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN 223 V + + G N + ++ + + Q E + I I P N Sbjct: 798 VSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGEN 857 Query: 224 I-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIEN 281 ++ A T M + K R F + + R + L+ A+ Sbjct: 858 FETLSKNADTAMYRVKHDGRNGFCFFTSEMQAH----------SARTLQLGNALRHALTR 907 Query: 282 RDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRS 341 + +HYQP +S +G +VGAEAL RW + +SP FIP+A+ G P+ ++R+ Sbjct: 908 GQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRT 967 Query: 342 VFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EF 399 + + DW+ P +++NL + + +L+ +++ +V R + LELTE Sbjct: 968 AIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAM 1027 Query: 400 ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYK 455 DP+ + ++ + G ++ +DDFGTGYSSLSYL+ V LKID+SFV + + K Sbjct: 1028 DDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDK 1087 Query: 456 NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + II MA +L ++ +AEG+ET+ Q +LR G + QG+ +SK LP E F+ + ++ Sbjct: 1088 AIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQFVSYLQKQ 1147 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 18/307 (5%) Query: 214 YDILPLPEMNI-SIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPH 272 I P ++ +++ A M Q + + + + L R+ Sbjct: 574 ISIYPDDGDDVETLVKNADIAMYAAKEENQGYRFFIEEMN---------RKTLERMM-LE 623 Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 + L++A+++ + ++YQP+V + +IVG EAL RW + +SP FIPLA++TGL Sbjct: 624 NNLRNALQHDQLIIYYQPLVD-STNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIV 682 Query: 333 PLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 P+ ++R + W + ++++NL + + + ++ + P + Sbjct: 683 PIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLK 742 Query: 392 LELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV- 449 LE+TE + P+ + + R G +DDFGTGYSSLSYL+ +D LKID+SFV Sbjct: 743 LEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVI 802 Query: 450 ---DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + + + II MA+ L + VAEG+E +Q+++L HG H QG+ + + +P E Sbjct: 803 DSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAE 862 Query: 507 DFLRWAE 513 F + Sbjct: 863 KFEDMLQ 869 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 99/360 (27%), Positives = 170/360 (47%), Gaps = 20/360 (5%) Query: 163 DVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP 220 D + ++ N V VIT + ++ L E I + P Sbjct: 534 DTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTD 593 Query: 221 EMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 + +++ A M K + + + + I R+ R+ S L A Sbjct: 594 GETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNI---------RVFERL-SLETSLHRA 643 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 ++N++ +HYQP V L NG+I G EAL RW + +SP FIPLA++TGL P+ + Sbjct: 644 VKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWV 703 Query: 339 IRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 +R+ W P +++NL + E + ++ +++ + P+ + LELTE Sbjct: 704 LRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTES 763 Query: 398 -EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL---- 452 + + SA I+ + G E+ +DDFGTGYSSLSYL+ + LKID++F+ + Sbjct: 764 LVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDP 823 Query: 453 EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + + II MA L +K +AEG+E ++Q ++L +H QG+ +S+ + E+ R Sbjct: 824 DDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLL 883 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 103/412 (25%), Positives = 180/412 (43%), Gaps = 30/412 (7%) Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 +++G+ VW+ + MG V++ S A + G+ Sbjct: 499 AYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGDE 558 Query: 181 HNVVITSSDEIA------------QGIITRLQKTPGEHIENNGIIYDILPLPE-MNISII 227 +V+ + + ++ L E + + + P +++ Sbjct: 559 FVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLL 618 Query: 228 TWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICV 286 A M + K R F + + + L R++ L+ AIE ++ + Sbjct: 619 AHADVAMYRSKELGRNNFQFYTPAMN---------DQALERLR-IEGELRHAIELNELVL 668 Query: 287 HYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDM 346 HYQP V L G IVG EAL RW + P SFI LA++TGL P+ ++++ Sbjct: 669 HYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQA 728 Query: 347 GDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE-REFADPKT 404 W Q I++NL + T + + ++D + + R + +ELTE AD + Sbjct: 729 KAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIER 788 Query: 405 SAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPH 460 + + + G ++ +DDFGTG+SSL+YL+ +D LKID+SFV + + ++ Sbjct: 789 NILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSS 848 Query: 461 IIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 II +A LKL ++AEG+ET+ Q + LR G + QG+ + K LP + Sbjct: 849 IISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLL 900 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 26/335 (7%) Query: 196 ITRLQKTPGEHIENNGIIYDILPLPEMNIS---------IITWASTKML-QKGWHRQVFI 245 + R+ + + N + + I + + ++ A + M K R F Sbjct: 375 MQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKELGRNNFQ 434 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 + + + + +RL+ AI N D +HYQP VSLA+ +I+GAEAL Sbjct: 435 YFSAEMNSSVTDRL----------ELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEAL 484 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLES 364 RW +SP SFIPLA++TGL PL ++R+ W P IS+NL Sbjct: 485 VRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSP 544 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDD 423 L I +++ ++ + + + LE+TE D + S ++++ R G +I LDD Sbjct: 545 RQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDD 604 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSLSYL+ VD LKID+SFV + + + II + + L L ++AEGIET Sbjct: 605 FGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIET 664 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 Q ++L +G GQG+L SK +P ++F+ Q Sbjct: 665 EDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 151/301 (50%), Gaps = 17/301 (5%) Query: 220 PEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 E +I A T + K R + + ++L+R+ + L+ A Sbjct: 559 GEDPQTIFKNADTALYRAKELGRNNYQLYTESMN---------QKVLQRL-DIENSLRRA 608 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 IE + + YQP + + GKIVG EAL RW D + P FIP+A+ +GL + + Sbjct: 609 IEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWV 668 Query: 339 IRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 + + W+ + H IS+NL + I +++ + + + P + LE+TE Sbjct: 669 LETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITES 728 Query: 398 -EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL---- 452 D + ++++ R+ G + LDDFGTGYSSL+YL+ L +D LKIDKSFV + Sbjct: 729 TAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANS 788 Query: 453 EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + + + +I +A L L +VAEG+ET +Q +L++ QG+L+SK LP E+ + Sbjct: 789 KEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKML 848 Query: 513 E 513 Sbjct: 849 R 849 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 100/340 (29%), Positives = 160/340 (47%), Gaps = 17/340 (5%) Query: 178 GNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ 236 G + +D+I + + E + I I P + ++++ A T M + Sbjct: 473 GADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFPDHGTDAVALLKKADTAMYE 532 Query: 237 -KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLA 295 K + ++ LL + L+ AIE +++ V+YQP Sbjct: 533 VKKQGKNGHLFYTTDFDAQLLENI----------EIERDLRKAIERKELVVYYQPQFHSE 582 Query: 296 NGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-P 354 + +++G EAL RW LSP FIP+A++TGL + ++R M W + P Sbjct: 583 SNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKGGP 642 Query: 355 QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYRE 414 +S+NL S + Q +++++ ++ P + LE+TE DP S I+ + Sbjct: 643 LIPVSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELEITESMMMDPAVSISILHELNK 702 Query: 415 AGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKL 470 G I LDDFGTGYSSLSYL+ + LKID+SF+ L K + II MAK LKL Sbjct: 703 IGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKL 762 Query: 471 KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 ++AEGIET Q + L ++ QG+ YS+ L + + Sbjct: 763 DVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANEVEQ 802 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 159/377 (42%), Gaps = 26/377 (6%) Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 +R + V + F+ V+ D + N ++ +I+ I+ Sbjct: 390 AMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISAT 449 Query: 200 QKTPGEHIENNGIIYDILPLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAA 258 +G D ++ A M K + + G+ + Sbjct: 450 VSIGVSIFPEDGADTDE---------LLKNADIAMYKAKEAGKNNCQFYTKGMNATAVNY 500 Query: 259 MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP 318 + + L+ AIE + ++YQP + L G + G EAL RW + +SP Sbjct: 501 LL----------LENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSP 550 Query: 319 DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLR 377 FIPLA++TGL P+ ++R + WL +++NL + P + Sbjct: 551 AHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVE 610 Query: 378 DMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 ++ + + + LE+TE + +++ + G + +DDFGTGYSSL+YLQ Sbjct: 611 AILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQR 670 Query: 437 LDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 + LKID+SF+ + + II +A ++L++VAEG+ET Q EWLR G Sbjct: 671 FPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCD 730 Query: 493 YGQGWLYSKALPKEDFL 509 QG+LY+K + + Sbjct: 731 QVQGFLYAKPMTAKQLE 747 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 94/300 (31%), Positives = 148/300 (49%), Gaps = 19/300 (6%) Query: 226 IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A M K R F + L +LA + + L+ A+E + Sbjct: 669 LLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARL----------TMEKYLRRALERDEF 718 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 VHYQP V L +G+I G EAL RW + ++SP SFIPLA++TGL + ++R+ Sbjct: 719 LVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACA 778 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 W P +++NL E + + + + PR I LE+ E D Sbjct: 779 QNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDV 838 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 + ++ +E G ++ +DDFGTGYSSLSYL+ D++KID+SFV + + Sbjct: 839 DGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIV 898 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA--EQHL 516 +I +A TL L++VAEGIET Q +LR QG+ +S+ +P +F + ++HL Sbjct: 899 RTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLRDQRHL 958 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 94/310 (30%), Positives = 162/310 (52%), Gaps = 18/310 (5%) Query: 214 YDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 I P + +++ A T M + K R F ++ + + R Sbjct: 646 IAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLS----------ASRNLQL 695 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + L+ A++ ++ ++YQP +S +NG+I+GAEAL RW + +SP FIP+A+ +G Sbjct: 696 ENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQI 755 Query: 332 EPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 + ++R+ +W+ I++NL + + L+ D++ Q+ + Sbjct: 756 IEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYL 815 Query: 391 ALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE DP++ +++ + E G + +DDFGTGYSSLSYL+ V LKID+SF+ Sbjct: 816 ELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFI 875 Query: 450 DAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 + + + + II+MA L L+ +AEG+ET++Q +LR HG H QG+ +SK LP Sbjct: 876 RDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPS 935 Query: 506 EDFLRWAEQH 515 +F ++ H Sbjct: 936 VEFEQFRHNH 945 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 89/355 (25%), Positives = 162/355 (45%), Gaps = 10/355 (2%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISII 227 + A++ GN V++T I L+ ++++ I+I Sbjct: 170 RGNDLIASLGGNRFVVLLTGLAHPEDATIVTLKLMQALESGFCIDNHEVVMTISTGIAIF 229 Query: 228 TWA---STKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 S +LQ + G A + R+ + ++ AIE + Sbjct: 230 PGDGDDSEALLQSAEQSMYSVKADGGNNYQFFKASTQSSAINRL-NMESEMRKAIERGEF 288 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP ++ +G +VG EAL RW + + P FI +A++TG+ P+ ++ Sbjct: 289 VLHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWVMYEACR 348 Query: 345 DMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 W + +++NL + + K+ +R + +NP + LE+TE D Sbjct: 349 QNKAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITESVIMKDI 408 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + + ++ G + +DDFGTGYSSL+YL+ +D LKIDKSF+D + + + Sbjct: 409 EATIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIV 468 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 II ++ LKL ++ EG+E ++Q WL++ + QG+ +SK LP ++F + Sbjct: 469 EAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFEAFVR 523 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 86/304 (28%), Positives = 161/304 (52%), Gaps = 15/304 (4%) Query: 218 PLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 + ++ A T + K + + + + + L RI + ++ Sbjct: 414 QDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEA---------KSLERIL-MENEMR 463 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 AIE ++YQP + +A + G EAL RW + + P+ FIP+A++TG+ L Sbjct: 464 KAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGE 523 Query: 337 LIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 I++ + +W Q +S+NL + + + + ++++D++ +++P + LE+TE Sbjct: 524 WILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITE 583 Query: 397 REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL---- 452 F + + ++ + R+ G +I +DDFGTGYSS SY++ L VD +KID SF+ + Sbjct: 584 SIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQ 643 Query: 453 EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 E + + I+ +A++L + ++AEGIE Q L+++G +GQG+L+SK LP +DF + Sbjct: 644 ESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLL 703 Query: 513 EQHL 516 Q L Sbjct: 704 RQEL 707 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 147/296 (49%), Gaps = 17/296 (5%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A T M K R + + + R+ R+ S L+ A+ + Sbjct: 573 LLKNADTAMYHAKEEGRNTYQFFSEEMN---------SRVSERL-SMETGLRHALARNEF 622 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP V+ G+IVG EAL RW Q + PD+FIPLA++TGL P+ ++R+ Sbjct: 623 LLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIGEWVLRNTCT 682 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 W Q IS+N+ T + +P +R ++ + P + LE+TE +P Sbjct: 683 QARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEITESVIMLNP 742 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVT 458 + + +++ +E G I +DDFGTGYSSLS L+ L DILKIDKSFV + + + Sbjct: 743 ERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLV 802 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II + + L +VAEG+E +Q +L + QG+ +SK LP E + Sbjct: 803 ATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAETLQPLLKN 858 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 85/308 (27%), Positives = 150/308 (48%), Gaps = 10/308 (3%) Query: 214 YDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRR---IQS 270 +++ P M ISI + + ++ ++ GL G + + R Sbjct: 476 HELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGL-GGNKCQFYTAEMNSRAKTRIE 534 Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 L+ A+ ++YQP + +G++VG EAL RW +SP+ FIPLA++TG+ Sbjct: 535 LESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGV 594 Query: 331 SEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 + +++ W +++N+ +++ ++ + P Sbjct: 595 IIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEW 654 Query: 390 IALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE D ++ I+ + + G + +DDFGTGYSSLSYL+ + LKID+SF Sbjct: 655 LELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSF 714 Query: 449 VDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + ++T +I +A ++ LK+VAEGIET +Q +L++ G GQG+LYS + Sbjct: 715 VRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVA 774 Query: 505 KEDFLRWA 512 KE F + Sbjct: 775 KEPFDHFF 782 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 139/253 (54%), Gaps = 5/253 (1%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 + + L A+ ++ +HYQP VS +G IVG EAL RW + L PD FI +A++ Sbjct: 549 KMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVAEE 608 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVN 386 TGL P+ ++R+ + W Q +++NL + + Q++ ++++ ++ Sbjct: 609 TGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTRLA 668 Query: 387 PRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 P + LE+TE D + + ++ G + +DDFGTGYSSL YL++ ++ LKID+ Sbjct: 669 PEYLELEITESSMIDVHRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDR 728 Query: 447 SFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFV + + + II MA L++ ++AEG+ET ++ +L++H QG+L+S+ Sbjct: 729 SFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRP 788 Query: 503 LPKEDFLRWAEQH 515 LP ED + + Sbjct: 789 LPSEDVAFYLQAQ 801 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 18/355 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + + + ++ + + L E I + P + ++ Sbjct: 649 GGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTL 708 Query: 227 ITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 A M Q K R F + + R + L+ A++ Sbjct: 709 SRNADAAMYQAKREGRNGFRFFTEAMQA----------RSTRTLLLANALRHALDRGQFS 758 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 +HYQP VSLA+G++VGAEAL RW + +SP F+P+A+ GL + ++R Sbjct: 759 LHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQ 818 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPK 403 WL + P +++NL + + +P+L+ +I + P Q+ LELTE DP+ Sbjct: 819 SRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQ 878 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTP 459 ++ ++ G + +DDFGTGYSSL YL+ V LKID+SFV + + Sbjct: 879 SAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVS 938 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II +A +L + VAEG+ET Q ++LRQ G QG+ +S+ LP E F+ + ++ Sbjct: 939 AIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQE 993 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 88/247 (35%), Positives = 134/247 (54%), Gaps = 6/247 (2%) Query: 275 LQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL 334 L+ AIE +HYQP + L + +VGAEAL RW + +SPD FIPLA+++GL PL Sbjct: 409 LRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEESGLILPL 468 Query: 335 TLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +IR + +W +S+NL S + +++ + V+P + LE Sbjct: 469 GEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDPEYLELE 528 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE D + S + +R+ G + +DDFGTGYSSL+YL+ + LKID+SF+ L Sbjct: 529 LTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHDL 588 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + I MA +L LK++AEG+E Q + L + QG+L+SK L +DF Sbjct: 589 GLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDDF 648 Query: 509 LRWAEQH 515 L + + H Sbjct: 649 LMYLKAH 655 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 16/339 (4%) Query: 180 AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-K 237 + V+ + + E I I P + ++ A T M + K Sbjct: 597 SEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVKNADTAMYKSK 656 Query: 238 GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG 297 + + G+ ++ + L A+E ++ ++YQP ++ Sbjct: 657 EISGSSYHFFSEGMDTRTFESI----------KLENDLYKALEQEELVIYYQPQINGKTN 706 Query: 298 KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQ 356 KI G EAL RW + + PD FIP+A++TGL P+ +++ + W Q P Sbjct: 707 KIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLI 766 Query: 357 HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREA 415 +S+NL + L + ++++++ +++P+ I LELTE + +++ + + + Sbjct: 767 SMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGL 826 Query: 416 GHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL--EYKNVTPHIIEMAKTLKLKMV 473 G + +DDFGTGYSSL YL+ L + LKIDKSFV + + +T II +AK L L ++ Sbjct: 827 GINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKDDAAITNTIITLAKNLNLDVI 886 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 AEG+ET +Q E+L + QG+ +S+ + ED + Sbjct: 887 AEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 17/298 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 S++ A M K + + + + + +R L+ AI+N++ Sbjct: 418 SLLKNADAAMYYVKRAGKNDYELFVNSMNV----------VAKRRLELESFLRHAIDNKE 467 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + V+YQP + + G+I+GAEAL RW + +SP FIP+A++TGL P+ ++R Sbjct: 468 LSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREAC 527 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 + +W P+ I++N+ + + +L+ ++ + + LE+TE D Sbjct: 528 RQVKEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCLELEITENMLMDD 587 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NV 457 + + + + ++ G + +DDFGTGYSSLSYL+ +D LKID+SF+ + + V Sbjct: 588 VEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKIDRSFITYVTTEPSDAAV 647 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 T II MA L L ++AEG+E + Q E+LRQH QG+ +S+ L D H Sbjct: 648 TQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIASDMEALLRSH 705 >UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C9RWE1_GEOSY Length = 818 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 152/299 (50%), Gaps = 14/299 (4%) Query: 219 LPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 + I A + +K +F P+ + L + L+ A Sbjct: 522 DAKTLIRKADIARYEARKKAASDFLFFTEPMAI------------RLHEKMAMERDLRRA 569 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 +EN + ++YQP + L + +++G EAL RW + +SP FIP+A+QTG+ P+ + Sbjct: 570 LENEEFELYYQPQIRLHDRQVIGMEALIRWRHPEKGMVSPSLFIPVAEQTGMIIPINEWV 629 Query: 339 IRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 IR+ E L + P +SINL S + L ++ + P + LE+TER Sbjct: 630 IRTACEQTKQLLDRFPDLSVSINLSPYEFESRRFVDKLARLLADAGLPPHHLDLEITERM 689 Query: 399 FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN-- 456 D + + I+S+ + G I +DDFGTGYSSLSYL DL +D LKID+SFV ++ K Sbjct: 690 TMDTERALDILSKLKGLGVTISMDDFGTGYSSLSYLTDLPIDRLKIDRSFVQHIQGKKDV 749 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + P II + + +K++AEG+ET + +L+ QG+ +S LP ++ +R+ + Sbjct: 750 ILPAIIRLGHNIGVKVLAEGVETETEAAYLQGKRCDEAQGYYFSPPLPYDELVRFLNEQ 808 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 92/343 (26%), Positives = 163/343 (47%), Gaps = 18/343 (5%) Query: 180 AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QK 237 +I + + I + E + + P + +++ A M K Sbjct: 696 DEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAK 755 Query: 238 GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG 297 R F + + + A + + R LRR + + +HYQP V + G Sbjct: 756 DMGRNTFQFYQPEMNVSAGARLNLERRLRRALR----------DNEFLLHYQPQVDIETG 805 Query: 298 KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQ 356 ++VG EAL RW + + P FIP+A+++GL PL+ ++R W + P Sbjct: 806 QVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPA 865 Query: 357 HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREA 415 +S+NL + I +L+ ++ ++P+ + LELTE + + + +++ Sbjct: 866 RVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHAL 925 Query: 416 GHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLK 471 G + +DDFGTGYSSLSYL+ VD LKID+SFV + + + +T II +A +L L+ Sbjct: 926 GIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQ 985 Query: 472 MVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ++AEG+ETS Q ++L++ QG+ ++K LP ++ Sbjct: 986 VIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQR 1028 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 18/332 (5%) Query: 190 EIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWL 247 +I + E + I + P ++ + ++ A M K + F + Sbjct: 790 KIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFY 849 Query: 248 PLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALAR 307 + + + + L+ A+E + +HYQP V L + KI+GAEA+ R Sbjct: 850 AAEANTNSVELL----------TLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVR 899 Query: 308 WPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPV 366 W + LSP FIPLA++TGL + I+R +W + +++NL + Sbjct: 900 WQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQ 959 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFG 425 E + Q + D + + P + LE+TE + + + ++ + + G + +DDFG Sbjct: 960 FRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFG 1019 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSS YL+ +D LKID+SFV + +T II MA +L++K+VAEG+ET + Sbjct: 1020 TGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQE 1079 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 Q +L++ G QG+L+S+ L DF+R + Sbjct: 1080 QLAFLKKQGCDQIQGFLFSEPLHSHDFVRMLK 1111 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 98/328 (29%), Positives = 160/328 (48%), Gaps = 18/328 (5%) Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITW-ASTKML-QKGWHRQVFIWLPLG 250 Q + + P E I + P + ++ A M K R + + Sbjct: 536 QSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAE 595 Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 + R + + L+ A+E + +HYQP +SLA+G++VGAEAL RW Sbjct: 596 MQA----------RSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSH 645 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTS 369 + + P FIP+A+ GL P+ ++R+ + + W+ +S+NL S Sbjct: 646 PELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRH 705 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGY 428 +P+L+ ++N Q+ + LELTE DP + +++ E G + +DDFGTGY Sbjct: 706 ADLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGY 765 Query: 429 SSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLSYL+ V +KID+SFV + + K + II MA +L ++ +AEG+ET Q E Sbjct: 766 SSLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLE 825 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +L+ G QG+ +S+ LP E F + Sbjct: 826 FLKAKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 88/298 (29%), Positives = 148/298 (49%), Gaps = 17/298 (5%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++ A T M K R + + + R + L+ A+EN + Sbjct: 1111 ALSMSADTAMYRAKQSGRNAYCFFTAEM----------QERSARNLQIENDLRRALENGE 1160 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + +HYQP +LA+ ++VGAEAL RW +SP FIP+A++ GL P+ ++R+ Sbjct: 1161 LRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAV 1220 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD- 401 + W ++ P +++NL + + ++ +++ + + + LELTE D Sbjct: 1221 SQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDN 1280 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 P + + + R G + +DDFGTGYSS+SYL+ V LKID+SFV L E + + Sbjct: 1281 PLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAI 1340 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 I +A+ L L+ +AEG+E+ Q +LR G QG+L+S+ L F + H Sbjct: 1341 VTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAAFVRAH 1398 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 4/245 (1%) Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 + L+ AIE + +HYQP ++L+ G+++G EAL RW +SP SFIP+A+ +G Sbjct: 324 TIEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSG 383 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 L P+ ++ + W +S+NL + ++++ + + ++P Sbjct: 384 LIVPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLASVIKNTLFNTGLDPHL 443 Query: 390 IALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 + +E+TE AD + + ++ G ++ +DDFGTG+SSL YL+ V+ LKID+SFV Sbjct: 444 LEIEITESMTADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFV 503 Query: 450 DAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 L + + + II MA+ L L +VAEGIET +Q +L+QH H GQG+L+SK LP Sbjct: 504 SELHNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLPP 563 Query: 506 EDFLR 510 Sbjct: 564 SVLEE 568 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 89/299 (29%), Positives = 147/299 (49%), Gaps = 17/299 (5%) Query: 219 LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQD 277 +I A M Q K R + + L + R RL Sbjct: 771 DGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLT----------QTARERLGLEARLHR 820 Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 A+ + + +HYQ + + +G+++G EAL RW ++PD FIPLA++TGL PL Sbjct: 821 ALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEW 880 Query: 338 IIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 ++R D W + +++NL L S + + + ++ + ++ LELTE Sbjct: 881 VLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTE 940 Query: 397 REFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 D + + + + G + +DDFGTGYSSL+YL+ L +D LKID+ FV + Sbjct: 941 SMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPED 1000 Query: 456 N----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + + II MA+ L+L ++AEG+ET +Q ++L + G GQG+L+ + LP E F + Sbjct: 1001 SSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQ 1059 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 148/295 (50%), Gaps = 17/295 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I A T M K R F + + + + + L+ A+E + Sbjct: 575 ALIKKADTAMYHIKESGRNSFQFFAEEMN----------QKVNARLTIETGLRRALEKGE 624 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + +HYQP + G +VG EAL RW D +SP FIP+A+ +GL + ++ + Sbjct: 625 MLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATAC 684 Query: 344 EDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 +W R +S+N+ + + +I ++P + LELTE + Sbjct: 685 CQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHN 744 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + I++R RE G I +DDFGTGYSSL+YL+ VD+LKIDKSF+D + E + Sbjct: 745 VDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAI 804 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 II +A + +K+VAEG+ET++Q + L + QG+ +S+ LP E+F R+ Sbjct: 805 VATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFERYI 859 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 109/473 (23%), Positives = 196/473 (41%), Gaps = 24/473 (5%) Query: 53 NKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHES 112 ++ A ELER + H ++ +++ Q + +++ Sbjct: 620 EILSIVAARAATELERLKADEALAEHRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAE 679 Query: 113 PPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQI 172 + I D ++ S + + A+ +ID A DV+ Sbjct: 680 GHGRYLSLLFIDLDRFKNINDSLGHSIGDKLLQAVARRTG-SLIDSA---DVLARLGGDE 735 Query: 173 DAAIIGNAHNVVI--TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITW 229 A ++ N V+ ++ + + Q + I + P+ +I Sbjct: 736 FAILLFNCVTPVVGADTAQRVIDALSQPFQIDDYSLHVSASIGITVAPVDAREPDELIKC 795 Query: 230 ASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHY 288 A M K R + + + + + + L+ A+ + ++Y Sbjct: 796 ADIAMFKAKDAGRNTYKFYERSMNLKTHELLL----------LENDLRHALSRDQLELYY 845 Query: 289 QPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGD 348 QP + L + IVG EAL RW + +SP FIPLA++TGL + I+RS + Sbjct: 846 QPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLAEETGLIVSMGEWILRSACRQIRT 905 Query: 349 WLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSA 406 W +H Q +++N+ + + + ++ V + LE+TE D ++S Sbjct: 906 WNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTGVPTEWLELEITESLLMYDIQSSI 965 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHII 462 + R ++ G + +DDFGTGYSSLSYL+ + LKIDKSFVD L + + Sbjct: 966 ETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFVDDLLTDASDAAIAESTL 1025 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +A + L +VAEGIE +Q ++L+Q G +GQG+L S+ LP ++ + Sbjct: 1026 ALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPVAQCTQFCRER 1078 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 84/299 (28%), Positives = 149/299 (49%), Gaps = 17/299 (5%) Query: 224 ISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENR 282 +S++ A M K R + + GL + + L+ A++ Sbjct: 597 VSLLKCADAAMFKAKELGRDNYRFYTAGLN----------ERASELLALEGALRQAVDKN 646 Query: 283 DICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 + V++QP V LA+ +I+GAEAL RW + +SP FIP+A++TGL + ++R Sbjct: 647 HLVVYFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQS 706 Query: 343 FEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA- 400 W +P IS+N+ + + + ++R ++ ++P + LE+TE Sbjct: 707 CLQARQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMN 766 Query: 401 DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKN 456 D + + G ++ +DDFGTGYSSL+YL+ + LKID+SFV + Sbjct: 767 DVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAA 826 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + +I++A+ + L ++AEGIE Q ++L G YGQG+L+S+ +P +F + + Sbjct: 827 IATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLVRQ 885 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 86/255 (33%), Positives = 134/255 (52%), Gaps = 6/255 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 + L+ A++ +HYQP V +A+GKI G EAL RW D +SPD FIPLA Sbjct: 504 HKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLA 563 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 ++TGL L ++R W Q P I++NL + + ++ +++ + Sbjct: 564 EETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFD 623 Query: 385 VNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 ++P + LELTE DP A +++ ++ G + LDDFGTGYSSL+YL+ +D LK Sbjct: 624 IDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLK 683 Query: 444 IDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SF+ + +V +I +A +L + +AEG+ET +Q +L QG+L+ Sbjct: 684 IDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLF 743 Query: 500 SKALPKEDFLRWAEQ 514 SK LP D Sbjct: 744 SKPLPANDLAALLAN 758 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 17/295 (5%) Query: 226 IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 + A T M K R F + + +R L++AI + Sbjct: 603 LFRNADTAMYRAKDVGRNGFQFYSAEMN----------NRMRERLYLEQSLRNAIGLHQL 652 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 + YQP + LA+G + AEAL RW +SP FIP+A++TGL P+ +I Sbjct: 653 SLWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASR 712 Query: 345 DMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 + W Q + ++IN+ + L+ K+ + ++ ++P+ + +E+TE Sbjct: 713 QLAKWRDQENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQM 772 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 + + RE G + LDDFGTGYSSL+YL+ +DILKID+SFV + + Sbjct: 773 DKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIV 832 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 II +A L + +VAEG+ET Q E+LR +G QG+ + K LP E+ L + Sbjct: 833 KTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 110/486 (22%), Positives = 189/486 (38%), Gaps = 20/486 (4%) Query: 30 HQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSY 89 QV+ +++ +S V R ++ + LE +R+++Y Sbjct: 143 FDQVDEQLLQQYAHSASAVL-RNFRLMEDLRRHAAMLEEEVAER--SRAEERIRQMAYYD 199 Query: 90 RYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGT 149 N SL + D +++ + R ++A+ Sbjct: 200 SLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAK 259 Query: 150 AHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIEN 209 + + I+ + I + + + I + I Sbjct: 260 RLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITT 319 Query: 210 NGIIYDILPLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRI 268 + I +++ A M K R + R R+ Sbjct: 320 SIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFAPEMNA---------RAFERL 370 Query: 269 QSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQT 328 S + ++ A+E + +HYQP V++ +G+I EAL RW + P FIPLA++T Sbjct: 371 -SLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEET 429 Query: 329 GLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNP 387 GL PL ++R+ + W P +++NL L + + + ++ + P Sbjct: 430 GLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETGLAP 489 Query: 388 RQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + +E+TE D + + R G I +DDFGTGYSSL YL+ V LKID+ Sbjct: 490 GWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDR 549 Query: 447 SFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFV + + + + +I MAK L L +VAEG+ET +Q E LR Y QG+L+S+ Sbjct: 550 SFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEP 609 Query: 503 LPKEDF 508 P E F Sbjct: 610 APAEQF 615 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 19/310 (6%) Query: 214 YDILPLPEMNISIITWASTKMLQKG--WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 I P + + + S LQK + + + + I L +Q Sbjct: 908 ISIFPNDGRDFNRLISQSEAALQKAKAAGKDTYNFFTEQMNI---------NALEHMQ-L 957 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 +L+ AI N++ ++YQP + N +++GAEAL RW + P FIPLA+++GL Sbjct: 958 QGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFIPLAERSGLI 1017 Query: 332 EPLTLLIIRSVFEDMGDWLRQH--PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 PL ++ W +++ P +++NL + I + + + + Sbjct: 1018 IPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQALERSGLPAEN 1077 Query: 390 IALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LELTE D + + R ++ G ++ +DDFGTGYSSLSYL+ L VD LKID+SF Sbjct: 1078 LELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSF 1137 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + E + II++ TL+L ++AEG+ET Q + L+ + QG+L+S+ +P Sbjct: 1138 VRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFSRPIP 1197 Query: 505 KEDFLRWAEQ 514 EDF EQ Sbjct: 1198 AEDFSGLFEQ 1207 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 97/331 (29%), Positives = 152/331 (45%), Gaps = 17/331 (5%) Query: 190 EIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWL 247 ++ + T + E + I + P ++ +++ A T M K R F + Sbjct: 765 KMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFF 824 Query: 248 PLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALAR 307 + R L R+ + L+ AIE ++ +HYQP V+ + + G EAL R Sbjct: 825 VPEMN---------TRALERLL-LENALRRAIERNELTLHYQPQVAATSDRPNGCEALVR 874 Query: 308 WPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVL 367 W D + P FIP+A+ +GL PL ++R W R + +N+ + Sbjct: 875 WQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQF 934 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSA-PIISRYREAGHEIYLDDFGT 426 + ++ NP +I LE+TE D + + G + LDDFGT Sbjct: 935 RRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGT 994 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSL+YL+ L + LKID+SFV L E VT + +A+ L L++VAEG+ET Q Sbjct: 995 GYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQ 1054 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 ++L G H QG+LYS+ L F W + Sbjct: 1055 RDFLVARGCHTLQGYLYSRPLDVAAFEAWMQ 1085 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 18/307 (5%) Query: 214 YDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 + P M+ ++ A M K R + + R Sbjct: 557 IAVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQA----------YSTRYLQV 606 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + L+ AI + VHYQP +SL +G ++GAEAL RW + +SP FIP+A+++GL Sbjct: 607 LNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLI 666 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 + ++R W + I++NL + +P L+ ++ P+ + Sbjct: 667 LQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYL 726 Query: 391 ALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE DP+ + +++ E G + +DDFGTGYSSLSYL+ LKID+SFV Sbjct: 727 ELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFV 786 Query: 450 DAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 + E K + II MAK L L+ +AEG+ET++Q+ +LR+ G H QG+ YSK LP Sbjct: 787 RDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPA 846 Query: 506 EDFLRWA 512 DF + Sbjct: 847 ADFETFI 853 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 156/307 (50%), Gaps = 18/307 (5%) Query: 214 YDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 I P M+ +++ A T M K R + + + R +RR+ Sbjct: 520 ISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTEMN---------TRAVRRLF-I 569 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 L+ A+ + ++YQP + LA+G ++G+EAL RW + + P F+P+A+++GL Sbjct: 570 EGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLI 629 Query: 332 EPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 P+ ++R + W +S+N+ + + + + ++ + P + Sbjct: 630 VPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYL 689 Query: 391 ALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE D ++SA ++ + G ++ +DDFGTGYSSLSYL+ ++ LKID+SFV Sbjct: 690 ELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFV 749 Query: 450 DAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 + + ++ +I M K LK ++VAEG+ET +Q +LR GQG+L+ + LP Sbjct: 750 HDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPA 809 Query: 506 EDFLRWA 512 ++F R Sbjct: 810 DEFARLL 816 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 18/310 (5%) Query: 214 YDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 + P M+ + A M K R F + + R Sbjct: 998 IAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQA----------RSARRLLL 1047 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + L+ A+ +HYQP +S+ +GKIVGAEAL RW + +SP FIP+A+++GL Sbjct: 1048 ENALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLI 1107 Query: 332 EPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 + ++R+ + + W HP ++INL + ++ +L+ +++ + P I Sbjct: 1108 LSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWI 1167 Query: 391 ALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE D P + +++ G + +DDFGTGYSSLSYL+ V+ LKID+SFV Sbjct: 1168 ELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFV 1227 Query: 450 ----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 D +E + + II +A ++ + +AEG+ET+ Q +LR G + QG+ +S+ L Sbjct: 1228 RDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTV 1287 Query: 506 EDFLRWAEQH 515 F + H Sbjct: 1288 ALFEAFVLGH 1297 >UniRef50_C5D592 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Geobacillus RepID=C5D592_GEOSW Length = 818 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 89/299 (29%), Positives = 150/299 (50%), Gaps = 14/299 (4%) Query: 219 LPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 P+ I A K+ QK + +F P+ R+++ L+ A Sbjct: 525 DPKTLIRKADIARYKLRQKPASQFLFFEEPMA------------RVIQEKIGMERELRRA 572 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 +E + ++YQP + L G + G EAL RW + +SP +FIP+A+QTG+ P+ + Sbjct: 573 LEKGEFELYYQPQIQLDTGMVTGMEALIRWNHPEKGLISPYAFIPVAEQTGMIIPINEWV 632 Query: 339 IRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 IR + L P +S+NL + + L ++ + P + LE+TER Sbjct: 633 IRMACQQTKQLLNDFPNLSVSVNLSPYEFENRRFVHKLMKLLEETGLPPHHLDLEITERM 692 Query: 399 FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL--EYKN 456 D + + I+ R + G I +DDFGTGYSSLSYL DL +D LKID+SFV + + + Sbjct: 693 TIDTERAITILKRLKSIGVTISMDDFGTGYSSLSYLTDLPIDRLKIDRSFVRNIRGKKEA 752 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + P II + + +K++AEG+ET + +L+ QG+ +++ L ++ + +H Sbjct: 753 ILPSIIRLGHNIGVKVLAEGVETEAEVAYLKDKHCDEAQGYYFAQPLSYKELKAFLYEH 811 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 17/297 (5%) Query: 226 IITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I A M L K R + + L I +L+ A+ + Sbjct: 832 LIQHADMAMYLAKQEGRNTYRYHTDALSIA----------ANERLVLETQLRQALSAGEF 881 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP++ G+++G EAL RW D + +SP FIP+A++TGL PL ++R+ Sbjct: 882 VLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACA 941 Query: 345 DMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-P 402 W+ P +++NL SE + +L+R ++ ++ + LELTE F + Sbjct: 942 QGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHA 1001 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + S I+ + G + +DDFGTGYSSL+YL+ +D LKID+SFV L + + Sbjct: 1002 EQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIA 1061 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II MA+ LKL ++AEG+E+ +Q + L QHG Y QG+L+ + +P ++ W ++ Sbjct: 1062 ATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFREN 1118 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 94/339 (27%), Positives = 158/339 (46%), Gaps = 22/339 (6%) Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYD--ILPLPEMNIS---IITWASTKMLQKGWH 240 T++ +IA ++ +L + H + I N+ ++ A M + Sbjct: 906 TAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAE 965 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 + + L+ + + L+ A+E + ++YQP V A G+I+ Sbjct: 966 GCGLYFYSHEMNEHLI----------KTLEMENSLRQALEKNEFQLYYQPKVEHATGRII 1015 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHIS 359 G EAL RW + P FIPLA++TGL + ++ W + P ++ Sbjct: 1016 GCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMA 1075 Query: 360 INLESPVLTS-EKIPQLLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGH 417 +N+ + E + Q ++ + Q+ P Q+ LELTE D + + + ++ G Sbjct: 1076 VNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGV 1135 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMV 473 + LDDFGTGYSSL+YL+ VD LKID+SF+ + + II +A TL L+ V Sbjct: 1136 SLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTV 1195 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 AEG+E + Q + G +Y QG+L+S+ LP EDF+ Sbjct: 1196 AEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALF 1234 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 134/257 (52%), Gaps = 5/257 (1%) Query: 264 ILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIP 323 + + L A+E + +HYQP +I G EAL RW + +SP FIP Sbjct: 556 LSTKNLKLESLLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWDNEELGMISPADFIP 615 Query: 324 LAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINH 382 LA++TGL P+ ++R+ W + P +S+NL +PQ++ ++ Sbjct: 616 LAEETGLIVPIGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFYQPDLPQVIGKILEE 675 Query: 383 YQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 + P + LE+TE ++ I+ + ++ G I +DDFGTG+SSL++L+ +D L Sbjct: 676 SGMAPELLELEITESMAMHADSAISILKQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHL 735 Query: 443 KIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID+SFVD + E +++ II +A L L++VAEG+E Q+++L+ H QG+ Sbjct: 736 KIDRSFVDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFH 795 Query: 499 YSKALPKEDFLRWAEQH 515 +SK + ++ + Sbjct: 796 FSKPVIRDAIPELLRKQ 812 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 105/376 (27%), Positives = 167/376 (44%), Gaps = 26/376 (6%) Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 R + V + F+ ++ + DAA + ++ S I + Sbjct: 331 ANRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLS 390 Query: 200 QKTPGEHIENNGIIYDILPLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAA 258 +G PEM ++ A M K R + + + Sbjct: 391 ASIGVALAPRDG------RDPEM---LLKNADIAMYRAKERGRNNYCFYGPEM------- 434 Query: 259 MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP 318 RR + L+ A+ ++ HYQP V LA G + GAEAL RW + L P Sbjct: 435 ---DHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLP 491 Query: 319 DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLR 377 FI +A++TGL PL ++R+ W P +++NL + + + Sbjct: 492 GEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVC 551 Query: 378 DMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 D++ + Q+ LE+TE AD S ++ R G + +DDFGTGYSSLSYL+ Sbjct: 552 DILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKR 611 Query: 437 LDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 +D LKID+SF+ + + + II MA++L+L ++AEG+ET Q E+L G Sbjct: 612 FPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCR 671 Query: 493 YGQGWLYSKALPKEDF 508 GQG+L+ +A+P EDF Sbjct: 672 SGQGFLFGRAMPAEDF 687 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 110/463 (23%), Positives = 203/463 (43%), Gaps = 40/463 (8%) Query: 83 RRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKD-GYRVWLTSHNDLGII 141 +++++ +++ + + + + L H P P ++ + + + L N I Sbjct: 643 QQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIA 702 Query: 142 RYMVAM----------GTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSD-- 189 M+ + G ++ + + G+ V+I + Sbjct: 703 LLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPAL 762 Query: 190 ---EIAQGIITRLQKTPGEHIENNGIIYD----ILPLPEMNIS---IITWASTKMLQKGW 239 E I +L K P +I I PE + ++ A M + Sbjct: 763 HDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKA 822 Query: 240 H-RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 H R F + L R + RLQ A+ ++C+++QP + +++ + Sbjct: 823 HGRSCFRYFSDELT----------RAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNR 872 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQH 357 I+GAEAL RW +SP FIP+A++TGL + L ++ +W ++ P + Sbjct: 873 IIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAIN 932 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAG 416 +++N+ + I + + + + + LELTE + + I+S R+ G Sbjct: 933 LAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYG 992 Query: 417 HEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKM 472 + +DDFGTGYSSL+YL+ +D+LKIDKSFVD + +K + I+ MA TL+LK+ Sbjct: 993 IRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKV 1052 Query: 473 VAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +AEG+ET +Q +L++ G QG+L S +P + F + Sbjct: 1053 LAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQ 1095 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 19/363 (5%) Query: 163 DVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDIL--PLP 220 D++ ++ A + ++ + G + I L Sbjct: 666 DILARLGGDEFLLVLPGADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDG 725 Query: 221 EMNISIITWASTKMLQKGWH-RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI 279 E +I A M Q R F + R+Q L++A Sbjct: 726 EEADDLIRNADIAMYQAKARGRNTFQLYTPDMNAA---------AAERLQ-LQGELRNAH 775 Query: 280 ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLII 339 +I +HYQP + + +G +VG EAL RW +SP FIPLA+++GL L I Sbjct: 776 LRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAI 835 Query: 340 RSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER- 397 R W R P +++NL ++ D + + P+ + LELTE Sbjct: 836 REACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADTSLPPQYLELELTESI 895 Query: 398 EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK-- 455 D + ++ + G ++ +DDFGTGYSSL+YL+ VD+LKID+ FV +E Sbjct: 896 VMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPS 955 Query: 456 --NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 + II + K L L+++AEG+ET Q ++L GV + QG+ +S+ LP ED + Sbjct: 956 DAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLA 1015 Query: 514 QHL 516 Q L Sbjct: 1016 QRL 1018 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 93/333 (27%), Positives = 156/333 (46%), Gaps = 18/333 (5%) Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIW 246 ++I I L E I I P ++ ++ A M K + F + Sbjct: 583 EKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQY 642 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + L + + L+ A+E + + YQP + L +G++VG EAL Sbjct: 643 FSREMNVQALEHLI----------LENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALI 692 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW D L P FIP+A++TGL P+ +++ W+ +++NL Sbjct: 693 RWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGI 752 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDF 424 +K +L+ ++ + P Q+ LELTE + S ++ + +E G + +DDF Sbjct: 753 QFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDF 812 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYL++ ++ +KID+SF+ + + + II MA L LK+ AEG+E Sbjct: 813 GTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENH 872 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 Q E+L + QG+L S LP+ +F R+ Sbjct: 873 SQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLR 905 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 99/357 (27%), Positives = 171/357 (47%), Gaps = 18/357 (5%) Query: 167 YSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-S 225 + + N + +++I + I +L P + I + P + S Sbjct: 1117 QGGDEFIVVLPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADS 1176 Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A T M Q K R V+ + + + RI L+ A+ ++ Sbjct: 1177 LLKNADTAMYQAKNDGRNVYRFFTMEMQAH----------SSRIMQIESALRVALFDQQF 1226 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 ++YQP +G I+G EAL RW + +SP FIP+A+Q+G + ++R+ Sbjct: 1227 ELYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIR 1286 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADP 402 + W P +++NL + E +P+ + ++ V+P + LELTE A+P Sbjct: 1287 QIKIWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANP 1346 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + ++ + G ++ +DDFGTGYSSLSYL+ V LKID+SF+ L + +++ Sbjct: 1347 EAVIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSII 1406 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II ++K L LK +AEG+ET Q ++L++ QG+ YSKAL E F + E+ Sbjct: 1407 EAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQ 1463 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 17/298 (5%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I A T M K R F + + R + L+ A+E Sbjct: 467 TLIQSADTAMYRAKADGRNSFRFFTPTMQAQ----------SARALQLTNALRRALERNQ 516 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + +HYQP VS+A G++ G EAL RW + +SP FIP+A+ TG P+ ++R+ Sbjct: 517 LSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPIGEWVLRTAL 576 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFAD 401 + W Q P +++NL + ++ +L+ ++ Y V P + LELTE AD Sbjct: 577 AQLRTWHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLELELTENVAVAD 636 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NV 457 P + + + G + +DDFGTGYSSLS+L+ + LKID+SFV L++ + Sbjct: 637 PHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLDHDGNDRAI 696 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II MA+ L ++ AEG+ET+ Q +LR+ G QG+ +S+ L ++ Q Sbjct: 697 VSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPLGAPHLQQYLLQR 754 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 91/336 (27%), Positives = 169/336 (50%), Gaps = 15/336 (4%) Query: 184 VITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHR 241 V++ + +++ + + E + + P + + +I +A T M K R Sbjct: 588 VVSLAQKLSDLVSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGR 647 Query: 242 QVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVG 301 F + + R + L+ A++ +++ V+YQP V + +G+I+G Sbjct: 648 NNFQFYTPDMNAHAG----------RRLQLENNLRKALQRQEMVVYYQPQVEMDSGRIIG 697 Query: 302 AEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISIN 361 +EAL RW + +SP+ FIPLA++TG+ E + + + W + HP+ I++N Sbjct: 698 SEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVN 757 Query: 362 LESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIY 420 L + +E + + ++N + R + +ELTE D + +++R + G + Sbjct: 758 LSARQFRNENLVDDIEQILNKTGLAARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLA 817 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVD--ALEYKNVTPHIIEMAKTLKLKMVAEGIE 478 +DDFGTGYSSLS+L +D LKID+SFV+ +L+ + II + +TL L ++AEG+E Sbjct: 818 IDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNGIARTIITLGRTLGLSIIAEGVE 877 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ++Q + L Q G QG+ +S+ + F E+ Sbjct: 878 NNEQRQLLLQLGCPQAQGYYFSRPVHDNAFSEMLEK 913 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 96/363 (26%), Positives = 170/363 (46%), Gaps = 20/363 (5%) Query: 163 DVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP 220 DV+ AA+I + + + + ++ + +Q + + G+ + P+ Sbjct: 341 DVLARLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPVD 400 Query: 221 EMNI-SIITWASTKMLQKGWH-RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 ++ +++ A+T M Q H F + G+ R+ L+ A Sbjct: 401 GVDAEALLKNAATAMHQAKQHGSNNFRFFSKGMN----------RMAWERIEIETGLRRA 450 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 ++ + + +HYQP V L G I+G EAL RW + +SP FIPLA++TGL P+ + Sbjct: 451 LDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWV 510 Query: 339 IRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 + S W R P +++N+ + L +I +NP + +ELTE Sbjct: 511 LESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTES 570 Query: 398 EFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL---- 452 + + + + G ++ +DDFGTGYS LSYL+ +D +K+D+SFV + Sbjct: 571 LIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENT 630 Query: 453 EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + +T II MA +LK++++AEGIET +Q +L+ GQG+ + + +P E Sbjct: 631 DDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVETAAEIL 690 Query: 513 EQH 515 Q Sbjct: 691 AQQ 693 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 16/303 (5%) Query: 218 PLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 + +I+ A + Q K R V+ + L R L+ Sbjct: 523 LDTDDATQLISNADAALYQAKEAGRNVYRFYTADLT----------RAAHERLGLEAALR 572 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 +E + +H+QP+V+L G++VGAEAL RW ++P FIPLA++TGL PL Sbjct: 573 RGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGE 632 Query: 337 LIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 ++ S +WL I++NL + + + +RD+++ + LE+TE Sbjct: 633 WVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITE 692 Query: 397 R-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 D + ++ + G + +DDFGTGYSSL+YL+ VD LKID+SFV + Sbjct: 693 STVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADD 752 Query: 456 N----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + ++ MA ++L ++AEG+ET++Q +LR G QG+L + DFL Sbjct: 753 ENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADFLGA 812 Query: 512 AEQ 514 E+ Sbjct: 813 VER 815 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 90/344 (26%), Positives = 163/344 (47%), Gaps = 18/344 (5%) Query: 179 NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ- 236 + + V + +I + + Q E ++ I + P + ++ A M Q Sbjct: 618 DNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQA 677 Query: 237 KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLAN 296 K R + L +R R+ ++ A+E + + YQP + L + Sbjct: 678 KEAGRNTCHFFSPELN---------MRATERLL-LESTMRRALEREEFFLVYQPQMELRS 727 Query: 297 GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQ 355 G I G EAL RW D + P++FIP+A++TGL PL ++ W ++ P Sbjct: 728 GHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPP 787 Query: 356 QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYRE 414 +++N+ + + + ++ ++P + LELTE +P+ + + + ++ Sbjct: 788 LRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKK 847 Query: 415 AGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKL 470 G + +DDFGTGYSSLS+L+ +D LKID+SFV + + II +A ++KL Sbjct: 848 MGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKL 907 Query: 471 KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +VAEGIE S+Q E++ Q QG+ S+ + E+F + ++ Sbjct: 908 TVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKR 951 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 17/301 (5%) Query: 219 LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQD 277 E + ++ A M K R + L L+ S + L Sbjct: 636 DGETPVQLMKNADAAMYHAKASGRNCAQYFNRSL----------DDSLKERISLENALNQ 685 Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 A++ ++YQP + + + +I+GAEAL RW + +SPD+FIPLA+++GL + Sbjct: 686 ALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSW 745 Query: 338 IIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 ++ + W +Q +S+NL + + E + + D+I Y V + LELTE Sbjct: 746 VLHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTE 805 Query: 397 REFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL--- 452 + + + + + G +I +DDFGTGYSSLSYL+ +D LKID+SFV + Sbjct: 806 SMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVD 865 Query: 453 -EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + + II MA L L+++AEG+ET+ Q E LR +G QG+L++K LP E Sbjct: 866 TDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEH 925 Query: 512 A 512 Sbjct: 926 L 926 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 18/298 (6%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A + K R + + + + H L+ A+E + Sbjct: 797 ALLRHADAALYHAKSRGRNTYRFFTREI----------DDRVSEYLHIEHGLRSALERGE 846 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 +HYQP V +A G++VG EAL RW + +SP F+P+A++TGL P+ + +IR Sbjct: 847 FELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREAC 906 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 W R +++NL S + + + + + ++PR + +E+TE D Sbjct: 907 RQAMLWRRAGLRPMTMAVNLSGRQF-SRSVIEAIDEALADSGLDPRWLQVEVTESVIMED 965 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----V 457 + + ++ R G + +DDFGTGYSSL+YL+ +D LKID+SF+ ++ + Sbjct: 966 TQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVI 1025 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II MA L++K++AEG+ET Q ++LRQ G QG+L S+ P +W + Sbjct: 1026 VDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWMLER 1083 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 91/354 (25%), Positives = 163/354 (46%), Gaps = 18/354 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + + + + ++ + T I I P + ++ Sbjct: 574 GGDEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTL 633 Query: 227 ITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 I A M K R F + + + S L+ A+E ++ Sbjct: 634 IKNADMAMYRAKEEGRNNFQFFVPEMNFRVDLLF----------SMEKDLRLALERGELF 683 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 + YQP LA+G + G EAL RW +SP FIP+A++TG + ++R+ Sbjct: 684 LQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQ 743 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPK 403 M +W + I++NL L + +L++ ++ ++ R + LE+TE D + Sbjct: 744 MAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQ 803 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTP 459 + +S ++ G ++ +DDFGTG+SSL+YL+ + V+ LKID+SF+ +E + Sbjct: 804 AAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIR 863 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 II + L L+++AEG+ET +Q ++LR G QG+ YS+ L EDF+R+ + Sbjct: 864 SIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMRFVK 917 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 143/298 (47%), Gaps = 17/298 (5%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I A M Q K R + + L R +RL+ AI + Sbjct: 1056 LIQHADAAMHQAKTLGRNTYHFYTEDL----------SRASNEHLELENRLRHAITANQL 1105 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 V+YQP V +A G I+GAEAL RW + + P FIPLA++TGL + +++ Sbjct: 1106 RVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCL 1165 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP- 402 W+ P +++NL I L+ ++ ++ LELTE Sbjct: 1166 QGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQG 1225 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + ++ R + +DDFGTGYSSLSYL+ +DILKIDKSFVD + + + Sbjct: 1226 EDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIA 1285 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 II M L K++AEG+ET +Q E+L+ G QG+L S +P E+F + ++++ Sbjct: 1286 ATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKENM 1343 >UniRef50_B4W3W9 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3W9_9CYAN Length = 560 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 87/249 (34%), Positives = 136/249 (54%), Gaps = 6/249 (2%) Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 +++ A+E ++ ++YQP V+L G+I GAEAL RW +SP FIPLA++TG Sbjct: 301 ELEIQMRQALERQEFQLYYQPKVNLLTGQIEGAEALVRWNHPQRGIISPVEFIPLAEKTG 360 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 L PL ++R W Q I++NL + + D+++ +NP Sbjct: 361 LIVPLGEWVLRQACHQARVWQDQGIYPLRIAVNLSPRQFNQSNLTNFVVDILHETGLNPH 420 Query: 389 QIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 + LELTE +P+++ + ++ G I +DDFGTGYS+LS L+ D+LKID+S Sbjct: 421 YLELELTESTLVQNPESAIATLQTFKALGIRISIDDFGTGYSALSQLKKFPFDVLKIDRS 480 Query: 448 FV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 FV + + +T I++MA++LKLK+VAEG+ET Q +L+ H QG+ +S L Sbjct: 481 FVCQLTEDSRDEAITTAILQMARSLKLKVVAEGVETLSQLNFLKGHQCDEIQGYWFSPPL 540 Query: 504 PKEDFLRWA 512 E F Sbjct: 541 SAEAFADLL 549 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 83/297 (27%), Positives = 144/297 (48%), Gaps = 18/297 (6%) Query: 225 SIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A T K R + + + + L+ A+E + Sbjct: 748 TLLQRADTATNRAKSDGRNTYRFFAPEMQL----------RSAHTLRLETALRRALERNE 797 Query: 284 ICVHYQPIVSLAN-GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 + +HYQP + L + G++ G EAL RW + +SP FIP+A+ TGL P+ ++++ Sbjct: 798 LVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTA 857 Query: 343 FEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA- 400 + W Q + +NL + + +P + ++ + + LELTE Sbjct: 858 LLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMD 917 Query: 401 DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKN 456 DP + ++ G + +DDFGTGYSSL+YL+ +D LKID+SFV L E + Sbjct: 918 DPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEA 977 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 + I+ +A+TL+ + +AEG+E +Q +LR G QG+L+S+ LP ++ W Sbjct: 978 IVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLR 1034 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 143/294 (48%), Gaps = 16/294 (5%) Query: 226 IITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I A M L K + + L R S L+ A+ + Sbjct: 594 LIRNADAAMYLAKAQGSNAYRFYTESLT----------RAANERLSMETSLRRALRCEEF 643 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP+V LA+G+++GAE L RW + + P FIPLA++TGL PL ++ Sbjct: 644 VLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACR 703 Query: 345 DMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PK 403 WL +++NL + +R + + P Q+ LELTE + + Sbjct: 704 QGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAE 763 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTP 459 + + + G + +DDFGTGYSSL+YL+ +D LKID+SFV L + + Sbjct: 764 QAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVT 823 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 II M + LKL+ +AEG+ET +Q +LRQ G GQG+L+S LP E F RW Sbjct: 824 TIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLR 877 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 99/354 (27%), Positives = 164/354 (46%), Gaps = 18/354 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + + + + + + Q P E + + P + ++ Sbjct: 635 GGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTL 694 Query: 227 ITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 A M K R + G A R R +Q + L+ A+E + Sbjct: 695 YQRADAAMYSAKQSGRNRY---------GFFTADLQARTARALQ-IENALRRALERQQFE 744 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 +HYQP VSL G++VGAEAL RW + ++P FIP+A+ +G L ++ + D Sbjct: 745 LHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARD 804 Query: 346 MGDWLR-QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPK 403 WL Q P + +S+NL + ++P+++ + + R++ LELTE DP Sbjct: 805 AKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPV 864 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTP 459 + ++ + + G + +DDFGTGYSSLS L+ + LKID+SFV L+ + Sbjct: 865 AALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVS 924 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 II MA+ L ++ AEG+ET Q ++LR G GQG+L+S+ LP + F + Sbjct: 925 AIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLR 978 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 89/256 (34%), Positives = 145/256 (56%), Gaps = 7/256 (2%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 + R Q ++L+ A+E + +HYQP L N +++G EAL RW +D +SP FIPL Sbjct: 762 MERFQ-MENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPL 820 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI-SINLESPVLTSEKIPQLLRDMINHY 383 A++TGL P+ +++ W+ Q + I S+N+ + L + Q ++ ++ Sbjct: 821 AEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDT 880 Query: 384 QVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 Q+ + + LE+TE + S ++ E G +I +DDFGTGYSSL+ L+ L + + Sbjct: 881 QLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNI 940 Query: 443 KIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KIDKSF+ ++ + II MA +L+L + AEG+ET Q+ L Q +Y QG+L Sbjct: 941 KIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYL 1000 Query: 499 YSKALPKEDFLRWAEQ 514 YSK LP E+ LR+ ++ Sbjct: 1001 YSKPLPAEECLRFVQE 1016 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 5/254 (1%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 R L+ AIE ++ ++YQP V L +G I+GAEAL RW + +SP FIP+A Sbjct: 318 RERFELETHLRQAIEKNELVLYYQPQVDLHDGTIIGAEALIRWKHPERGLISPAQFIPVA 377 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 ++TGL P+ ++R+ + W + INL + + + L+ +++N + Sbjct: 378 EETGLIVPIGEWVMRTAIRQIAIWKELGVTPVRVGINLSALQFKRQNLAALVEELLNEHD 437 Query: 385 VNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 ++P + LE+TE D + ++ R G ++ +DDFGTGYSSLS L+ LK Sbjct: 438 IDPSLVDLEITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYSSLSQLRQFPFQTLK 497 Query: 444 IDKSFVDALE---YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 ID+SFV LE K + II MA +L+ ++ EG+ETS Q +++ + QG+L+S Sbjct: 498 IDRSFVTDLESSGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTIMKELNCNEMQGFLFS 557 Query: 501 KALPKEDFLRWAEQ 514 K LP E+F + Sbjct: 558 KPLPAEEFTALLRE 571 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 22/344 (6%) Query: 185 ITSSDEIAQGIITRLQKTPGEHIENNGIIYDI-----LPLPEMNISIITWASTKML-QKG 238 + +AQ I++ + H + + I E +++ A M K Sbjct: 247 HDQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKE 306 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 + + + L + R L R+ + L+ A+E + +HYQ +L GK Sbjct: 307 EGKNNYQFYSPDLKV---------RSLERLM-LENNLRKALERHEFFLHYQAKRNLKTGK 356 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQH 357 I G EAL RW + +SP FIPLA++TGL L ++R+ W +Q P Sbjct: 357 IAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPIC 416 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAG 416 I++NL + + + + + + + P + +E+TE D + + I++ + G Sbjct: 417 IAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALG 476 Query: 417 HEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKM 472 + +DDFG GYSSL++++ +D LK+D SF+ + E + +T II M KTL L + Sbjct: 477 VRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTV 536 Query: 473 VAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 +AEG+ET +QE +LR QG+ +SK + E+F R+ H+ Sbjct: 537 IAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTRFMLAHM 580 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 88/316 (27%), Positives = 148/316 (46%), Gaps = 23/316 (7%) Query: 214 YDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 + P + ++I A T M K R + + R R+ + Sbjct: 568 IAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNA---------RSFERL-TM 617 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 L+ A+ + + YQ V +G++ G EAL RW + +SP FIPLA+ G+ Sbjct: 618 ESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVI 677 Query: 332 EPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 + ++R+ W+ P I++N+ + +P+++ + + P+ + Sbjct: 678 SDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYL 737 Query: 391 ALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE ++ R G I +DDFGTGYSSLSYL+ + +D LK+D+SFV Sbjct: 738 ELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFV 797 Query: 450 DAL---------EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 + + + + II +A LKLK +AEG+ET +Q E+LR G QG+L S Sbjct: 798 NDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLIS 857 Query: 501 KALPKEDFLRWAEQHL 516 + + ED + +++L Sbjct: 858 RPVSGEDLISLFDRNL 873 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 17/326 (5%) Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 L + H ++ I S++ T M K + F + + Sbjct: 536 PYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGKNNFKFFTEKM---- 591 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 +I R+Q + L+ AI + +HYQP V L G+I+G EAL RW + Sbjct: 592 -----REQINERMQ-MENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGM 645 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQ 374 + P+ FI +A++ L PL ++ + W RQ + IS+N+ + L S + Sbjct: 646 VHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFT 705 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 L+ +++ +Q+ P + LE+TE DP+ + P + + G + +DDFGTGYSSLSY Sbjct: 706 LIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSY 765 Query: 434 LQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ L + LKID+SFV +E + I +A+TL L +VAEG+ET Q E+LR Sbjct: 766 LKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQ 825 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQH 515 G QG+ +SK LP + + + +H Sbjct: 826 GCDSAQGYYFSKPLPANNIMAFVSRH 851 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 89/354 (25%), Positives = 153/354 (43%), Gaps = 18/354 (5%) Query: 180 AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGW 239 + V + ++ H+ + P I+ AS + Sbjct: 976 PEDTVCRQGGDEFILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQ 1035 Query: 240 HRQVFIWLPLGLVIGLLAA---------MFVLRILRR---IQSPHHRLQDAIENRDICVH 287 + F L L A F ++ + I L+ AIE+ + ++ Sbjct: 1036 DGESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLY 1095 Query: 288 YQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMG 347 YQP KI+G EAL RW + +SP FIP+A+++GL + ++R+ + + Sbjct: 1096 YQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLA 1155 Query: 348 DWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTS 405 W +++NL + + + ++ +V+P + LELTE D + + Sbjct: 1156 SWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERT 1215 Query: 406 APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHI 461 ++++ G + +DDFGTGYSSLSYL+ +D LKID+SFV + + I Sbjct: 1216 LNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAI 1275 Query: 462 IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 I MAK+L K +AEG+ET +Q +L + QG+ +SK LP + + Sbjct: 1276 ISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLLANQ 1329 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 90/297 (30%), Positives = 149/297 (50%), Gaps = 17/297 (5%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I + M Q K R + + L + +RL+ A+ ++ Sbjct: 500 LIQHSDMAMYQAKKEGRNTYRYHTEALSVA----------ANERLIMENRLRYALSAEEL 549 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP+V G +VG EAL RW + + P FIP+A++TGL PL ++R+ + Sbjct: 550 ILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACK 609 Query: 345 DMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-P 402 W+ +++NL SE + +++ ++ Q+ + LELTE F + Sbjct: 610 QARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFMEHV 669 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + S +++ + G + +DDFGTGYSSL YL+ +D LKID+ FV L + + Sbjct: 670 EQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIA 729 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II MA+ LKL ++AEGIE+ +Q +LRQ Y QG+L+ + +P + W +H Sbjct: 730 ATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAWLREH 786 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 97/342 (28%), Positives = 165/342 (48%), Gaps = 23/342 (6%) Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGII-----YDILPLPEMNI-SIITWASTKMLQ-KG 238 S +A I + + P E ++ I + P + +++ A M K Sbjct: 600 PGSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKS 659 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 R + + L R I +L+ A++ + +HYQP V L G+ Sbjct: 660 AGRNSYKFYTADLNA----------RAREILEIESQLRYALDRDEFVLHYQPQVDLKTGE 709 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQH 357 I+GAEAL RW + L P FI +A++ G + +I+ + W RQ P+ Sbjct: 710 IIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRIS 769 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAG 416 +++NL + + + L+ ++ + + + +E+TE D +T+ I R + G Sbjct: 770 LAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMG 829 Query: 417 HEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKM 472 ++ +DDFGTGYSSLSYL+ D LKID+SFV + + + II MAK L + + Sbjct: 830 LQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTV 889 Query: 473 VAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +AEG+ET +Q ++L + G H QG+L +K +P ++F R E+ Sbjct: 890 IAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLEK 931 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 132/515 (25%), Positives = 220/515 (42%), Gaps = 32/515 (6%) Query: 14 LILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAA 73 L+++ +LP+ L + + +L++ + A ++ Q + L+R+ G Sbjct: 15 LLVAGILPLLLGLLFTFVESRLMVKRDLESTAQIAMNHAENISAQAWKMVDRLQRFHGQP 74 Query: 74 CSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSS-----------LEHESPPDTFPEPGK 122 C+ E++R+ + Y + + I N CSS + + P+T+ E Sbjct: 75 CNIIG-DELQRLGSVFSYFRAIGVIHNTNVYCSSTFGSTLTPISRVIQQPLPETYSERWS 133 Query: 123 ISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN 182 +S G I M G Y M+D ID++ S + N Sbjct: 134 LSIAGSDN--VKERPALIFVQMPLTGDGAY-AMVDAQYLIDLMIAISKIRGYQLTLKMDN 190 Query: 183 VVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQ 242 + I R+ +E + I++ A W + Sbjct: 191 G---HPIQTGPAITPRIGLFSTSALE--------IRSSRFPITLNITAPASQEIANWKQA 239 Query: 243 VFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGA 302 F +LPL +++ LL + +R ++ I N + V+YQPI + G Sbjct: 240 FFTFLPLAIILSLLFTTAIWYWQKRKLLFRDEIRKGIANGEFSVYYQPIYDAESQTCTGV 299 Query: 303 EALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINL 362 E L RW +++G W+ PD FI A+ + P+T + V D+ W + P H+ +N+ Sbjct: 300 ETLLRWRRSNGKWIRPDIFISAAEAESMIIPITRHLFDLVASDIASWQVK-PGFHLGLNV 358 Query: 363 ESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYL 421 + L + + I+LELTER + + + RE G I + Sbjct: 359 AAEHLHHPSFVSDVHRFAEKVASHSLSISLELTERNLISNGPEIIQRLHQLREDGFMITI 418 Query: 422 DDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGI 477 DDFGTG+ SLSYLQ+ +D LKID+ FV A+ E + II ++ + L+ VAEG+ Sbjct: 419 DDFGTGHCSLSYLQNFPLDCLKIDQGFVSAISSPDEEAPILDAIINLSHRINLQSVAEGV 478 Query: 478 ETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 ET +Q +L+QHGV Y QG+LY+K + E FL W Sbjct: 479 ETKQQLMYLQQHGVKYIQGFLYAKPMDNESFLVWL 513 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 128/516 (24%), Positives = 228/516 (44%), Gaps = 28/516 (5%) Query: 14 LILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAA 73 L+++ LLP+ L ++ + + + + ++ + +A ++ D L+ + Sbjct: 14 LVVAGLLPLLLCLFFTFIEARQTGARQQEMTAAALLSQAEHISDLAWDMTDSLQTFSNRP 73 Query: 74 CSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLT 133 C + +++++ Y + V +N CSS + + W T Sbjct: 74 CKDI-RSQLQKLGALNPYFRSVGLTQDNTVYCSSAFGATRGPVAGMIRHALPAPGQSWWT 132 Query: 134 -------SHNDLGIIRYMVAM-GTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVI 185 D + +M G ++D ID++ + ++ +++ + Sbjct: 133 LSLAGTFGVQDRPAVIFMRQTPGKTGSYAVVDGQYLIDLMRATGLKL-------GYHITM 185 Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFI 245 L I+I A + W + + Sbjct: 186 RFGGGYQIANAAPLNPQQANWKTRTFN----SGSSHYPIAISISAPRTETLQNWRQVLLT 241 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 ++P+ +++ +L LRR S L+ + + VHYQP+ +L NG++ G EAL Sbjct: 242 FMPMAVILSVLFVAVTNSWLRRRSSYRDELRRGMAFGEFSVHYQPVCNLVNGQLAGVEAL 301 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESP 365 RW ++DGSW+ PD FI A+ G+ LT +++ + +D W + HI IN+ + Sbjct: 302 MRWQRSDGSWVRPDIFIAAAEAEGMIVQLTRHLLQLIAKDCASW-KVPAGFHIGINVAAD 360 Query: 366 VLTSEKIPQLLRDMINH-YQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 L E + +R + + P I LELTER + A ++ R G + +DD Sbjct: 361 HLQHEDFVKDIRGFSQNIAHLLP-TITLELTERSLISEGDLVAHRLAELRSEGIRVAIDD 419 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIET 479 FGTG+ SL+YLQ +D LKIDKSFV+A+E + + II++A L L++VAEGIET Sbjct: 420 FGTGHCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTIIQLAHRLALQVVAEGIET 479 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 Q E+L+ HGV + QG+ Y++ L + W EQ+ Sbjct: 480 PLQMEYLKNHGVVFIQGFYYARPLSSAALMVWIEQN 515 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 151/296 (51%), Gaps = 16/296 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++ +A + Q K R + + L + + R+Q L+ A+E + Sbjct: 637 DLLKYADVALYQAKQQGRATYRFYTQAL---------HDQSVERVQ-LERLLRHALERNE 686 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 ++YQP V L +G+I+G EAL RW +SP FIP+A+Q+GL + +++ Sbjct: 687 FELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIAEQSGLIIDIGNWVMKQAC 746 Query: 344 EDMGDWLRQHPQQHISINLESPVL-TSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 W Q +S N+ + S ++ Q LRD + V+P ++ +ELTE DP Sbjct: 747 HQAKRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALAESGVDPTRMEVELTESLLLDP 806 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VT 458 + I+ R G ++ LDDFGTGYSSLSYL+ + ILKID+SFV A + + Sbjct: 807 QGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILKIDRSFVSAADNNADDAEMV 866 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II MA L++ ++AEGIET+ Q + L G GQG+ YS +P +F +Q Sbjct: 867 KTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHYSCPVPATEFSLLLQQ 922 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 89/299 (29%), Positives = 149/299 (49%), Gaps = 17/299 (5%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A T M K R F + + + L+ A+E + Sbjct: 809 ALLKNADTAMYRAKERGRNTFRFYAAKMNAQNTEQLM----------LESALRHALERGE 858 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + +HYQP + L +IVG EAL RW + P FIP+A++ GL L + Sbjct: 859 LEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAEELGLIVSLGKWALERAC 918 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FAD 401 D W + P+ +S+NL S + ++ ++ + P + LE+TE A+ Sbjct: 919 ADSRSWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLEASGLEPSLLELEITEGAVMAN 978 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 P+ +A ++ R+ G + +DDFGTGYSSLSYL+ + +KID+SF++ L + + + Sbjct: 979 PEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQDADARAL 1038 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 II +A L++K+VAEGIET+ Q ++LR HG QG+ K +P ++ + +HL Sbjct: 1039 IDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADEVRNFMARHL 1097 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 164/341 (48%), Gaps = 18/341 (5%) Query: 180 AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QK 237 +IT + + I + E + + P + +++ A M K Sbjct: 714 DEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAK 773 Query: 238 GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG 297 R F + + A + + R LRR + + +HYQP V + +G Sbjct: 774 DMGRNTFQFYQPEMNASAGARLNLERRLRRALR----------DNEFLLHYQPQVDIVSG 823 Query: 298 KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQ 356 +IVG EAL RW + + P SFIPLA+++GL PL+ ++R W Q P Sbjct: 824 QIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPA 883 Query: 357 HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREA 415 +S+NL + V I +L+ ++ + PR + LELTE + + + +++ Sbjct: 884 RVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHAL 943 Query: 416 GHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLK 471 G + +DDFGTGYSSLSYL+ VD LKID+SFV + + + +T II +A +LKL+ Sbjct: 944 GIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQ 1003 Query: 472 MVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 ++AEG+ETS Q ++L++ QG+ ++K L E Sbjct: 1004 VIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 18/334 (5%) Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKM-LQKGWHRQVF 244 S++ + Q + + EH N I + P E ++ A + M L K + Sbjct: 538 SAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGY 597 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + + R + R+ ++L A+E VHYQP + L +G+I G EA Sbjct: 598 RFYTPDMN---------TRAMERLL-LQNQLHQALELGQFQVHYQPQMDLRSGRICGVEA 647 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLE 363 L RW + + P FIP+A+ TGL EPL ++R+ ++ W + P ++S+NL Sbjct: 648 LVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLS 707 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLD 422 +P ++ ++ + ++ LE+TER D + + +SR G + +D Sbjct: 708 PRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSID 767 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIE 478 DFGTG+SSL+YL+ L V LKID+ FVD + + + +I + +TL+L+++AEG+E Sbjct: 768 DFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVE 827 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 T +Q +LR+HG QG+ ++ +P + W Sbjct: 828 TREQASFLREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 17/298 (5%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A T M K R + + + R+ RR+Q+ L+ AIE+ D Sbjct: 801 TLLKHADTAMYEAKESGRNAYRFFLPEM---------TQRVTRRLQT-EAELRKAIESGD 850 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + +HYQP + A+G++ G EAL RW + L PD F+P A+Q+GL PL ++R Sbjct: 851 LRLHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREAC 910 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 W P +++N+ + + ++ +P +I LE+TE D Sbjct: 911 LQQVRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLGETGADPARIELEITESALMDA 970 Query: 403 K-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + G + LDDFGTGYSSLSYL+ L + LKID+SFVD L E + Sbjct: 971 TPELVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAI 1030 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 T + +A+ L +++VAEG+ET Q +L + G QG+L+S+ L E+F W E+ Sbjct: 1031 TSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFEEQ 1088 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 16/292 (5%) Query: 225 SIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +++ A T M + + + G+ + + L+ A+E ++ Sbjct: 1192 TLVKHADTAMFRAKEQGNSYQFYEKGMETAAV----------KRLGLEAELRRALEQNEL 1241 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 ++YQP ++L G+I E L RW + + P FIPLA++TGL + I+R Sbjct: 1242 ALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLAEETGLIASIGAWILREACT 1301 Query: 345 DMGDW-LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-P 402 M W R HI++N+ L E + + ++ + P+ + LE+TE Sbjct: 1302 QMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETGLPPKWLELEITESVVMKGA 1361 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + P R RE G + +DDFGTGYSSL+YL+ VDILKID+ F+ + + + Sbjct: 1362 GAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAII 1421 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 II +A +L+LK+VAEG+ET QEE+L+ H QG+ S+ L + + Sbjct: 1422 KGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYLSEPLSAAEIEQ 1473 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 219 LPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 +I+++ A M Q H+ F + + + +I L+ A Sbjct: 508 DGNDSITLLRNADLAMYQSKRHKGDFTFYSSDMNQHAV----------KILELEKDLRQA 557 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 +E ++ +HYQP VSL +GKIVG EAL RW +SP FIPLA++TGL P+ + Sbjct: 558 LERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWV 617 Query: 339 IRSVF-EDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 + + + +Q P +++NL S + ++ ++ ++P + LE+TE Sbjct: 618 LEQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITES 677 Query: 398 EFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN 456 DP+ + + +E G + LDDFGTGYSSL+YL+ VD LKID SF+ + + Sbjct: 678 MIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDS 737 Query: 457 ----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 V I+++A L L VAEG+ET +Q ++L + QG+LYS+ LP EDF Sbjct: 738 SSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLL 797 Query: 513 EQHL 516 +L Sbjct: 798 RSNL 801 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 18/357 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + + G + ++ + Q E + I + P + ++ Sbjct: 690 GGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETL 749 Query: 227 ITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 A M + K R F + + R + L+ A+ + Sbjct: 750 SKNADAAMYRVKQASRNDFRFFTQEMQTH----------SARTLQLVNALRHALPRHEFE 799 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 +H+QP V+L +G IVGAEAL RW + +SP FIP+A+ +G + ++R+ Sbjct: 800 LHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQ 859 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE-REFADPK 403 + WL I++NL + + L+ +++ + P + LELTE DP Sbjct: 860 LKQWLDAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPP 919 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTP 459 + I+++ E G + +DDFGTGYSSLSYL+ V+ LKID+SFV + + K + Sbjct: 920 AAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVT 979 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 II +A +L + +AEG+ET+ Q +LR G QG+ SK LPK+ F + + Sbjct: 980 AIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRNSI 1036 >UniRef50_UPI0001C43017 probable signaling protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43017 Length = 573 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 261 VLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 V + R + L+ AI+ + ++YQP L +G + G E L RW +SP Sbjct: 311 VYQEFSRYFHVENDLRKAIDRGEFALYYQPQFCLESGDVCGEEVLVRWKHPIEGTISPGE 370 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDM 379 FI +A++TGL P+ I+R W+ + P+ +S+NL I + + Sbjct: 371 FISIAEETGLIIPIGEWILREACRQKAKWINEGYPKVPMSVNLSLKQFLQHNIVHTIEKI 430 Query: 380 INHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDV 439 + ++ P + LE+TE D + I+++ + G I LDDFGTGYSSL Y+ L V Sbjct: 431 LKETKLPPEYLDLEITESVTVDLDRTLDILNQLIKVGVRISLDDFGTGYSSLQYVGQLPV 490 Query: 440 DILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQ 495 LKID+SFV + E + + II + ++L+LK++AEG+ET +Q ++L++ G Q Sbjct: 491 HELKIDQSFVKKIGKGKEGEAIISMIIHLGRSLELKVIAEGVETKEQLDFLQKQGCDLVQ 550 Query: 496 GWLYSKALPKEDFLRWAE 513 G+ Y+K L E++ ++ Sbjct: 551 GYYYAKPLSTEEYEQYLR 568 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 138/252 (54%), Gaps = 6/252 (2%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 + L+ AIE + +HYQP L G++VG EAL RW + + P FIP A++ Sbjct: 449 LLWLETELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAEE 508 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVN 386 T L PL ++ + + W +++N+ + + Q++ +++HY + Sbjct: 509 TSLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLP 568 Query: 387 PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKID 445 + LE+TE D + +A +++ G ++ +DDFGTGYSSLSYL+ + LKID Sbjct: 569 ATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKID 628 Query: 446 KSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 +SF++ + + + II +A + ++++AEG+ET +Q +L++H YGQG+L+++ Sbjct: 629 RSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNR 688 Query: 502 ALPKEDFLRWAE 513 LP +D R + Sbjct: 689 PLPAKDIERQLK 700 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 107/352 (30%), Positives = 160/352 (45%), Gaps = 15/352 (4%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPL-PEMNISI 226 S Q I G+ VV +DE+ + E I + I P E + Sbjct: 606 SGSQFFLLIEGDPKEVVFDFADEVLTEVKQSFFANGQELIPSGSIGIAFYPDHAENATEL 665 Query: 227 ITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICV 286 + A M + + +V + LR L+ A+EN + + Sbjct: 666 LARADVAMRL---SKDDMGGGAV-MVYDPKYGEVAPQSLR----MEADLKHALENNQLHL 717 Query: 287 HYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDM 346 HYQP L N +VG EAL RW +SP FIPLA++TGL PL ++R Sbjct: 718 HYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGEFIPLAEETGLIHPLGRWVLREACRQA 777 Query: 347 GDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKT 404 W + +++N+ S L +L + +N +Q++P+ I LE+TE D + Sbjct: 778 KFWQNNFARIVPVAVNVSSLQLKKNNFVHVLEECLNEFQIDPQLIELEITESAVMDRLEK 837 Query: 405 SAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPH 460 S +++ + G + +DDFGTGYSSLSYL+ LKID+SFV LE + Sbjct: 838 SMELLNAIKGLGFNLAIDDFGTGYSSLSYLKKFPFSKLKIDRSFVMDLETDENDAAIITA 897 Query: 461 IIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 II MA +L LK +AEG+ET +Q+ +L HG QG+L S+ L + Sbjct: 898 IISMATSLGLKTIAEGVETVEQKHFLTDHGCDEVQGFLLSRPLSADAIEEMY 949 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 145/299 (48%), Gaps = 19/299 (6%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A M Q K R V + + + + + L+ AIEN Sbjct: 604 LMKQADIAMYQAKKEGRNVLRFFDPQM----------QETIAKRTALEGDLRKAIENHQF 653 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQ V + GAEAL RW + +SPD FIPLA+++ L P+ ++ + Sbjct: 654 QLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACA 712 Query: 345 DMGDWL--RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 + W + +S+N+ + ++ +I Y++NP + LELTE D Sbjct: 713 RIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDN 772 Query: 403 -KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + + +S +E G + LDDFGTGYSSL YL+ L +D LKID+SFV + + + Sbjct: 773 IEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAI 832 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 II MA +L L ++AEG+ET +Q++ L G QG+L+ K +P E F + L Sbjct: 833 VRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSL 891 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 95/297 (31%), Positives = 152/297 (51%), Gaps = 17/297 (5%) Query: 226 IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A T M K R + + L + + RL AI ++ Sbjct: 793 LMQQADTAMYRAKHDGRDGYRYFSEELFLK----------AKARLELEQRLHRAITGQEF 842 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 V YQP +S+ +I+GAEAL RW + + P FI +A++TGL + + ++ Sbjct: 843 KVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCR 902 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-P 402 DWL QH P ++++NL L + QL+ ++++ + LELTE + Sbjct: 903 QGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQ 962 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 + + I+ R+ G I +DDFGTGYSSL+YL+ +D+LKIDK FV+ + ++ + Sbjct: 963 EETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIA 1022 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 I+ M +L+L ++AEG+ET Q E+L Q G Y QG+LYS LP E+F + Q Sbjct: 1023 ATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQ 1079 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 88/250 (35%), Positives = 140/250 (56%), Gaps = 8/250 (3%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 L+ AIE +++ V+YQPI+SL GKI G EAL RW + +SP +FIPLA++TGL Sbjct: 1138 LETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGL 1197 Query: 331 SEPLTLLIIRSVFEDMGDWLRQ---HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNP 387 P+ ++R+ + W +Q +P +S+NL + + + + +I +VNP Sbjct: 1198 IIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNP 1257 Query: 388 RQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + LE+TE + +++ ++ R + ++Y+DDFGTGYSSLS L +D LKID+ Sbjct: 1258 STLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDR 1317 Query: 447 SFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFV + + I+ +A L + +VAEGIET+ Q LR YGQG+ +SK Sbjct: 1318 SFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKP 1377 Query: 503 LPKEDFLRWA 512 L ++ + Sbjct: 1378 LNRQAAEQLM 1387 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 96/356 (26%), Positives = 168/356 (47%), Gaps = 18/356 (5%) Query: 167 YSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS- 225 + Q A N + ++ Q T Q T E I + P + + Sbjct: 201 QARDQFFLAFYTIDRNEIRDMIRDVIQIFSTPFQLTDQELTITPSIGVSVFPDDATDWTT 260 Query: 226 IITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++++A + + K + + L + H ++ A++ + Sbjct: 261 LLSFADLALEIAKENGGNTYCFYTNEL----------KKTNEEKLYIQHSIRKALKQNEF 310 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQPIV + G IV EAL RW W+SP +FIP+A++T L +P+ ++R+V E Sbjct: 311 TLHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPATFIPIAEETNLIQPIGDWVLRNVCE 370 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FADP 402 W + P I +N+ + + + ++ Y ++P + LE+TE Sbjct: 371 QSKKWKEKGLPHVQIGVNVSIKQFLQADLVKHIEHVLRTYDLDPFCLKLEITESMAMHHI 430 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 + + G ++ +DDFGTGYSSL+YL+ L VDI+KID+SFV + ++ Sbjct: 431 DYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLPVDIIKIDRSFVQDMVKHSYDLSIV 490 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +I++A +L++K+VAEG+ET +Q L++ G QG+ +SK L E F + +Q Sbjct: 491 RAVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRAQGYYFSKPLAAEQFEQLVQQ 546 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 155/290 (53%), Gaps = 16/290 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A M Q K R V + + I ++ R+Q L+ A+EN + Sbjct: 782 TLLKHADIAMYQAKAAGRNVVRFFTAEMNI---------QVRDRLQ-LEGALRSALENGE 831 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + + +QP V +G+++GAEAL RW + + P FIPLA++TGL P+ ++R+ Sbjct: 832 LHLAFQPQVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAAC 891 Query: 344 EDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 W + + I++N+ + S +P + ++++ + P + LELTE D Sbjct: 892 RQARQWEQAGRRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDA 951 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + + ++ R ++ G + LDDFGTGYSS +YLQ +D LKID+SFV ++ + + Sbjct: 952 EQAEEMLHRLKQLGVSLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIV 1011 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 II +A +L ++++AEG+ET Q+ L + G QG+L+ + +P +F Sbjct: 1012 VAIIALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 17/292 (5%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A M K R F + L R+ R+ S L+ A+EN + Sbjct: 348 TLVKNAEVAMYRAKEQGRNCFRYYTRELN---------ERVASRM-SMEKHLRKALENEE 397 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + YQP L G++ G E L RW + + P SFIPLA++TGL + ++R+ Sbjct: 398 FELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTAC 457 Query: 344 EDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 W +++NL ++ ++ ++ ++PR + LE+ E D Sbjct: 458 LQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHD 517 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 +++A +++ + G ++ +DDFGTGYSSLSYL+ LKID SFV + + Sbjct: 518 VESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAI 577 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 II MA L L +VAEG+ET Q E+LR HG + QG+ S+ LP +F Sbjct: 578 AKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFE 629 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 87/302 (28%), Positives = 140/302 (46%), Gaps = 17/302 (5%) Query: 218 PLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 E ++ A + M K R F + L LA + L+ Sbjct: 415 LDGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARIL----------LESGLR 464 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 +A++ ++ + YQP + LA GK++G EAL RW + +SP FIPLA++TGL P+ Sbjct: 465 NAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQ 524 Query: 337 LIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 ++ W+ Q IS+NL +++ + + P + LELT Sbjct: 525 WALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELT 584 Query: 396 ER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV----D 450 E D + + ++ G + +DDFGTG+SSLSYL+ +D LKID+SFV Sbjct: 585 ESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTR 644 Query: 451 ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 E + I +A +L L+++AEG+E +Q E+L Q QG+ Y + L + F Sbjct: 645 DPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEM 704 Query: 511 WA 512 + Sbjct: 705 FM 706 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 87/254 (34%), Positives = 130/254 (51%), Gaps = 5/254 (1%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 R S L+ A+E + + +QP + LA G VGAEAL RW + + PD FIP+A Sbjct: 600 ERRFSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVA 659 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 + TGL P+ +IRS + W +++N+ + Q L + Sbjct: 660 ESTGLIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRESG 719 Query: 385 VNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 V+ R + +E+TE ++ + G I +DDFGTGYSSLSYL+ L V LKI Sbjct: 720 VDSRLLEIEVTESVLMQHPMASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKI 779 Query: 445 DKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SFV L +T I+ M L+LK +AEG+E+ +Q + LR+ G QG+ YS Sbjct: 780 DRSFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYS 839 Query: 501 KALPKEDFLRWAEQ 514 + LP + F+ W + Sbjct: 840 RPLPNDTFMTWVRE 853 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 93/378 (24%), Positives = 163/378 (43%), Gaps = 26/378 (6%) Query: 142 RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQK 201 R + +V + F+ ++P S DAAI+ ++++ E + Sbjct: 462 RLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPS 521 Query: 202 TPGEHIENNGIIYDILPLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMF 260 ++G DI ++ A T M K R + + + Sbjct: 522 IGISIFPDDGPDGDI---------VLKNADTAMYHAKAAGRNNYQFFAADMN-------- 564 Query: 261 VLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 R + +L+ AI ++ + +QP + G EAL RW +SP Sbjct: 565 --RTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPAR 622 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDM 379 FIP+A++TG+ + ++ + +M W+ I++N+ + L + + + Sbjct: 623 FIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANA 682 Query: 380 INHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 + + + LE+TE +P+ + I+ R G + +DDFGTGYSSL+YL+ Sbjct: 683 LTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFP 742 Query: 439 VDILKIDKSFVDALEYKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 +D LKID+SFV +E+ I I +A +L L ++AEG+ET Q E LR +G Sbjct: 743 IDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEV 802 Query: 495 QGWLYSKALPKEDFLRWA 512 QG+L+SK L + Sbjct: 803 QGFLFSKPLTGAAAFAFL 820 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 160/336 (47%), Gaps = 18/336 (5%) Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKM-LQKGWHRQVF 244 ++ ++ + +I + P E I P E ++++ A M K + + Sbjct: 437 TAKKLLEQLIEPIHVQPNEIYLTASIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDRY 496 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + + + +R+ + L+ A+ ++ V+YQP + L + +I G EA Sbjct: 497 QFFEREMT----------QTTKRVFELENDLRKAVARNELRVYYQPQIQLDSQQITGMEA 546 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLE 363 L RW +SP FIPLA++TGL + ++R + + W Q P +++NL Sbjct: 547 LVRWQHPQRGLISPADFIPLAEETGLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLS 606 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLD 422 + + + + + +NP + LE+TE D S + E G + +D Sbjct: 607 PLQFRHKALVRNVAKTLKETGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAID 666 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIE 478 DFGTGYSSLSYL+ + LKIDKSF++ + + +I +A +L LK+VAEGIE Sbjct: 667 DFGTGYSSLSYLRYFPLTKLKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIE 726 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 Q ++L + H GQG+L+S+ +P ED + Q Sbjct: 727 HEDQVQFLVKRSCHQGQGFLFSRPVPAEDMEQLLRQ 762 >UniRef50_Q1YRT2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRT2_9GAMM Length = 314 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 16/303 (5%) Query: 214 YDILPLPEMNI-SIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPH 272 I P ++ ++I A + M + R F + G+ + + Sbjct: 13 ISIFPDDGEDVSALIKHADSAMFRTKEKRDDFCFYERGMEA----------EIAKRLKLE 62 Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 L+ AI++ + +HYQP + G ++GAEAL RW +SPD FIPLA+++GL Sbjct: 63 QELRKAIDSDQLVLHYQPQIDFKTGDLLGAEALVRWEHPLKGLVSPDDFIPLAEESGLIN 122 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 LT ++++V WL + +++NL L E L D+I + P + L Sbjct: 123 QLTDWVLKNVAVQTKRWLDEGYSLRLAVNLSVKDLMQEDFHTKLEDLIKRSDLPPDVLEL 182 Query: 393 ELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 E+TE D P+ +++ ++ G + +DDFG+GYSSL+YL+ L VD+LKID+SF+ Sbjct: 183 EITESTLMDHPELMIKELNKIKKMGITVAVDDFGSGYSSLNYLKKLPVDVLKIDRSFISD 242 Query: 452 LEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 +E + II +AK L + VAEG+ET Q + L Q G QG+L SK +P + Sbjct: 243 IESDPNDSAIVAGIIALAKNLGMSTVAEGVETEAQRKILEQLGCDTFQGYLVSKPVPPQL 302 Query: 508 FLR 510 F Sbjct: 303 FTE 305 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 83/296 (28%), Positives = 151/296 (51%), Gaps = 17/296 (5%) Query: 226 IITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A T M K + + + + + ++L+ + N ++ Sbjct: 281 LLKNADTAMARAKAAGKNTYQFFKAEMNKAAFERLM----------LENQLRKVLSNNEL 330 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 ++YQP + L++G++VG EAL RW + SP F+P+A++ GL P+ ++R+ + Sbjct: 331 ILYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPVAEEMGLIVPIGEWVLRTACQ 390 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK 403 W + P +S+N+ S + + Q++++ + +NP + LELTE + Sbjct: 391 QNQTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADSNLNPIYLELELTESVLMAEE 450 Query: 404 TSA-PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + +++ + G I +DDFGTGYSSLSYL+ +D+LKID+SFV + +T Sbjct: 451 SGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLKIDRSFVKDICSDGNDAAIT 510 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II MA +L L +VAEG+ET Q +L+Q QG+ +S+ + E + ++ Sbjct: 511 TAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYFSRPICSEKMTQTLQR 566 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 109/386 (28%), Positives = 177/386 (45%), Gaps = 27/386 (6%) Query: 144 MVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII------- 196 +G A +++ A+ V A + G+ +++ + + + Sbjct: 537 NDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILA 596 Query: 197 ---TRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ-KGWHRQVFIWLPLGL 251 E I I P E + I ++ A M + K + VF + + Sbjct: 597 ACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVFRYFTPEM 656 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 R L ++ +L+ AIE ++ VHYQP+V G++VGAEAL RW Sbjct: 657 NA---------RALEHMR-MESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNP 706 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEK 371 +SP+ FIPLA++TGL + ++R+ D W R + +++N+ Sbjct: 707 VLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRT 766 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + +++R +N + P + LELTE + + + II G +DDFGTG+SS Sbjct: 767 LVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSS 826 Query: 431 LSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 +SYL+ D LKID+SF+ L ++ II MA ++ LK+V EG+ET Q E+L Sbjct: 827 ISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFL 886 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWA 512 R G H QGWLYS+ +P +DF Sbjct: 887 RLSGCHIAQGWLYSRPIPGKDFQELI 912 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 136/254 (53%), Gaps = 8/254 (3%) Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 S L+ A+E ++ +HYQPIV + + +IVG EAL RW D + P FIPLA++TG Sbjct: 571 SLETDLRQALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETG 630 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVN 386 L PL +I + W + P +S+N+ + + + + ++ + Sbjct: 631 LILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGLP 690 Query: 387 PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKID 445 P + LE+TE D + +A ++R + G +I +DDFGTGYSSLSYL+ L +D LKID Sbjct: 691 PACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKID 750 Query: 446 KSFVD----ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 +SF+ E + + II +A++L L ++AEG+E Q + LR QG+++S+ Sbjct: 751 RSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSR 810 Query: 502 ALPKEDFLRWAEQH 515 + R QH Sbjct: 811 PVEATAAGRLIRQH 824 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 6/253 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 R L+ A + ++YQP S A+G+I G EAL RW + +SPD FIPL Sbjct: 436 RDRMFLEIDLRHATLRNEFVLYYQPKASCADGRITGVEALLRWQHPERGIVSPDQFIPLL 495 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQ 384 ++TGL + ++ +W +S+NL + L +E + + + Sbjct: 496 EETGLIVQVGRWVLEEACRQAVEWQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKTG 555 Query: 385 VNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 +N + LE+TE D + +S ++ G I LDDFGTGYSSL+YL+ +D +K Sbjct: 556 LNAACLDLEITESMLMDNADMAIQTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIK 615 Query: 444 IDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 +D+SFV + + ++T +I MA LKLK+VAEG+ET +Q L H QG+ + Sbjct: 616 VDRSFVQDIAADSDDASITRAVITMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYFF 675 Query: 500 SKALPKEDFLRWA 512 S+ +P Sbjct: 676 SRPMPASGMTELL 688 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 89/337 (26%), Positives = 162/337 (48%), Gaps = 17/337 (5%) Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KG 238 N ++ + I E I + P + ++I A T M + K Sbjct: 604 ENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPKNGDTTETLIKNADTAMYKSKE 663 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 + + G+ ++ + L A+E ++ + YQP ++ K Sbjct: 664 TPGTSYHFFSEGMDTRTFESI----------KLENDLYKALERDELIIFYQPQINYKTNK 713 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQH 357 I G EAL RW + ++PD FIPLA++TGL P+ +++ + + +W Q P Sbjct: 714 IKGVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEACKQLKEWHNQGYPLIS 773 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAG 416 +S+NL + ++ +++ ++P + LELTE + + + +++ G Sbjct: 774 MSVNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTENLIVKNTEVTLKTMTQLNGLG 833 Query: 417 HEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL---EYKNVTPHIIEMAKTLKLKMV 473 + +DDFGTGYSSL YL++L + LKIDKSFV + + +T II +A+ LKL+++ Sbjct: 834 VNLAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTDDAAAITNTIITLAQNLKLEVI 893 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 AEG+ET +Q ++L + H QG+ +SK + + ++ Sbjct: 894 AEGVETKEQADYLLEQNCHLMQGYFFSKPMKAGEIMK 930 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 137/524 (26%), Positives = 221/524 (42%), Gaps = 32/524 (6%) Query: 2 RTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKD 61 + R G++ ++ + L L QQ E S V + + + Sbjct: 5 KQRRERLFHFGIVFAALAIVPLLMAPLVFQQARMRADGEAAVTSVAVLRQLDTLLGVVSG 64 Query: 62 ALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPG 121 +L + G C+E L + R++ Y + + ++ CSSL+ E P Sbjct: 65 SLDRSQGALGKPCAEV-LGRLTRMTMLSPYFRSLVLVERGNVYCSSLQGELKDLPLPVAF 123 Query: 122 KIS---KDGYRVWLTSHNDLGIIRYMVAMGTAH-----YVVMIDPASFIDVIPYSSWQID 173 K G R+ ++ R V M + +ID +D+ +S+ Sbjct: 124 KALGSLAPGQRITPSNATPQVPERASVIMSRGDANGSGVLAIIDGQYLLDIQQAASYDGR 183 Query: 174 AAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP-EMNISIITWAST 232 + +V+ S G + Q + G I P E+ +++ ++ Sbjct: 184 FQV-----QMVLRESQRQLPGGMPATQ-------DGGGAIAASARFPVEVRVAVAPALAS 231 Query: 233 KMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 W + ++ G LA +F RR S + A+ R+ + YQPI+ Sbjct: 232 AYRADAWRHYTPFIVLAAMLAGYLAHLFC----RRRLSLVGDMYRAMRAREFHMVYQPII 287 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 L G+ G EAL RW + D S + PD F+PLA+ G+ LT I V D+ L Sbjct: 288 RLDTGECRGVEALVRWRRPDNSQVRPDIFVPLAEDNGMIGDLTRHIFGLVAADLAQ-LGL 346 Query: 353 HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISR 411 H+ +N+ L + +R ++ + Q+ LE+TER + I + Sbjct: 347 GAGDHLGVNVSGSHLAGQGFVDDVRRLLGAIGSDGPQLVLEVTEREALPRDAQAQRNIRQ 406 Query: 412 YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKT 467 RE G + LDDFGTG SSLSYLQ L D LK+D+SFV + ++ V II +A+ Sbjct: 407 LRELGVQWALDDFGTGQSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVVLETIIGLAQR 466 Query: 468 LKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 L L + AEGIET +QE++L H V +GQG+L+S L + W Sbjct: 467 LDLDVTAEGIETREQEQYLCGHSVQWGQGYLFSPPLTAAELGAW 510 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 12/262 (4%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 + L+ AIE R+ C+ YQPIVS+ +++G EAL RW W+SP FI +A+ Sbjct: 452 KRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALVRWHHPQRGWISPAEFISVAE 511 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQH-------PQQHISINLESPVLTSEKIPQLLRDM 379 +TGL PL ++ + W Q P +S+NL S + ++ + Sbjct: 512 ETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVNLSSKQFCQPDLIHYIQQV 571 Query: 380 INHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 + + + LELTE + T+ ++ + +E G ++ LDDFGTGYSSLSYL Sbjct: 572 LQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYLHRFP 631 Query: 439 VDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 +D+LKID+SF++ +E + + I+ +A++L L++VAEG+ET Q + L+ Y Sbjct: 632 LDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQCGYA 691 Query: 495 QGWLYSKALPKEDFLRWAEQHL 516 QG+L S+ L E ++ +++L Sbjct: 692 QGYLISRPLTPEKTEQFLQEYL 713 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 163/297 (54%), Gaps = 17/297 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I A T M Q K + R F + + + L +R + ++ A+ + Sbjct: 690 TLIKNADTAMSQAKRYSRNTFHFFTEEMQVHL----------QRKLKIVNAMRHALLRNE 739 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + VHYQP +S G I+GAEAL RW + +SP FIP+A+ +G + ++R+ Sbjct: 740 MQVHYQPQISAVKGHIIGAEALLRWRHPELGDISPGEFIPIAESSGQIVAIGEWVLRTAI 799 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFAD 401 + M W + +++NL + + ++ M+N Q+ + + LELTE D Sbjct: 800 DQMKVWQNEGLAPMVVAVNLSALQFKQANLIGMIISMLNKAQLAHQYLELELTEAITMDD 859 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV----DALEYKNV 457 P+ + I+++ G + +DDFGTGYSSLSYL+ V LKID+SF+ + + + Sbjct: 860 PQQAINIMNQLHAKGIRMSIDDFGTGYSSLSYLKQFKVYKLKIDQSFICNLARDSDDRAM 919 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II+MAK L ++ +AEG+ET++Q E+LR HG + QG+ +SKA+P ++F R+A+Q Sbjct: 920 VHAIIDMAKNLGMQTIAEGVETAEQLEFLRLHGCNEIQGYYFSKAIPADEFSRFAKQ 976 >UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q2BCE5_9BACI Length = 744 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 153/295 (51%), Gaps = 16/295 (5%) Query: 225 SIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I A T M L K + F + L + R + + L+ A++ + Sbjct: 457 TLIKHADTAMYLAKERGKNNFQFYTSSLEG----------LASRKMALENGLRKALDRGE 506 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + +HYQP + L GK+ G EAL RW + DG + P FIPLA++TGL P+ I+R+ Sbjct: 507 LLLHYQPQIDLKTGKLKGTEALVRWQRPDGHLVPPGEFIPLAEETGLIVPMGKWILRTAC 566 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 E W + I++N+ L + ++ +++ + P + LE+TE + Sbjct: 567 EQHKRWKLEGAGSVPIAVNISVRQLEDPEFIMYVKTVLSSCDIEPGCLELEITESIMQNI 626 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + + ++ ++ G + +DDFG GYSSLSYL+ L +D +KIDKSFVD + + ++ Sbjct: 627 EKATIALNELKKIGIRLSIDDFGKGYSSLSYLKHLPIDTIKIDKSFVDDILDPAQNGSLV 686 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 II+M L +VAEGIE +Q E+L ++ GQG+ +S+ + E F + + Sbjct: 687 KAIIDMGLNLNFSVVAEGIEHKEQAEFLLENNCPVGQGYYFSRPVTGEVFKEFIK 741 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 9/257 (3%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 R + L A+E +H+QP + L ++G EAL RW + + P FIP+A+ Sbjct: 621 RRLEIVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPVAE 680 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHPQ---QHISINLESPVLTSEKIPQLLRDMINHY 383 +TGL L ++R+ + WL + P +S+NL L ++ + + + Sbjct: 681 ETGLINDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALEDS 740 Query: 384 QVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 Q+ LE+TE D + + +E G + +DDFGTGYSSL+YLQ +DIL Sbjct: 741 GFPADQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPIDIL 800 Query: 443 KIDKSFVDALEYKNV-----TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGW 497 KIDKSFVD L N+ T I+ +AKTL+L+ VAEG+E S+ L+ GQG+ Sbjct: 801 KIDKSFVDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQGY 860 Query: 498 LYSKALPKEDFLRWAEQ 514 +++ L Q Sbjct: 861 FFARPLDAGALTTLMAQ 877 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 86/297 (28%), Positives = 152/297 (51%), Gaps = 17/297 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 S+I A M K R + + + +A+ R+ + + L A+ N + Sbjct: 671 SLIKSADAAMYHAKSLGRNTYQFFSAEM-----SAVATERL-----ALENALHQALSNGE 720 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 ++YQP + + + +++G EAL RW + W+ P FIPLA++TG+ + ++ Sbjct: 721 FRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEAC 780 Query: 344 EDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 +W +++NL L + P+ + +++ ++ P + LELTE D Sbjct: 781 RQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRD 840 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + ++ + +E G +DDFGTGYSSL YL VD LKID+SF+ + ++ + Sbjct: 841 VGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAI 900 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 T II +AK L LK+VAEG+ET++Q E+L + G QG+ +S+ +P ++ W + Sbjct: 901 TRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEIAGWLSR 957 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 15/302 (4%) Query: 219 LPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 ++I A M + G V A R + L+ A Sbjct: 406 DSGDGSTLIRNADIAMYRAKQE--------GGGVFSFYAPEMNQRAME-TMEIESALRLA 456 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 +E + ++YQP V LA+G+I G EAL RW ++P FIPLA++TGL P+ + Sbjct: 457 LERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWV 516 Query: 339 IRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 ++ + W + P ++++NL + + +P L+R+++ ++P + LE+TE Sbjct: 517 LKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTES 576 Query: 398 E-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL---- 452 AD ++ G + LDDFGTGYSS ++L ++ LKID+SF+ + Sbjct: 577 MVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDP 636 Query: 453 EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + II MA ++LK +AEG+ET Q +LR+ G QG+L S+ LP ++ Sbjct: 637 NSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALV 696 Query: 513 EQ 514 + Sbjct: 697 RR 698 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 29/370 (7%) Query: 164 VIPYSSWQIDAAIIGNAHNVVITSSDEI------AQGIITRLQKTPG--EHIENNGIIYD 215 + A + G+ VV+T+ D+ A+ II + + G EH N Sbjct: 475 LRCVRETDTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIG 534 Query: 216 ILPLPEMNIS---IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 I P+ + ++ A M + K R + + + + A V Sbjct: 535 ITIFPDDAVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEMDAEIQARKVV---------- 584 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 H L+ A+ + +HYQP++ + G++VG EAL RW W+SP FIP+A++T L Sbjct: 585 EHDLRVALGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLI 644 Query: 332 EPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEK-IPQLLRDMINHYQVNPRQ 389 PL I+ DW R P Q I++NL + + ++ D+++ P Q Sbjct: 645 VPLGRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQ 704 Query: 390 IALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE + + + ++ + R+ G I +DDFGTGYSSL+YL+ VD LKID+SF Sbjct: 705 LQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSF 764 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + + V I+ + +L ++ EG+ET +Q ++L+ HGV QG+ ++KALP Sbjct: 765 VVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALP 824 Query: 505 KEDFLRWAEQ 514 ++F R+ + Sbjct: 825 PDEFARFVRE 834 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 17/296 (5%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 + A M K R + + + R++ I +L+ A+E + Sbjct: 461 LTKNADAAMYHAKSLGRNNYQFFTRAMN---------ERVME-IAELESKLRRAVERNEF 510 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 ++YQP + + G++VGAEAL RW ++PD FIP+A+ +GL P+ L ++R Sbjct: 511 VLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACR 570 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK 403 +W + +++NL + L Q + +++ + P + LE+TE + Sbjct: 571 QNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAE 630 Query: 404 -TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 + + R G ++ LDDFGTGYSSLSYL+ L ++ +KIDKSF+ +E + Sbjct: 631 TEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATII 690 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II M+ L+L ++AEG+E Q E+L++ G QG++ S+ +P ++F + Sbjct: 691 TAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFALLLQN 746 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 87/363 (23%), Positives = 166/363 (45%), Gaps = 25/363 (6%) Query: 163 DVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDIL----- 217 D + ++ + ++ T+S + + L + P E + + Sbjct: 701 DTLARWGGDEFVLLLTDLDDIQNTTS--ATEKFMALLTERPFATSECDINTTASIGIALY 758 Query: 218 -PLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRL 275 + +++ A T M K R + + L L R L Sbjct: 759 PQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLA----------EQAERRHRMEINL 808 Query: 276 QDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLT 335 + A++ ++ + YQP + L +I G EAL RW + +SP FIPLA++TGL PL Sbjct: 809 RSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLG 868 Query: 336 LLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 +++ W + + +++NL + + + ++ ++ ++P + LE+ Sbjct: 869 EWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEI 928 Query: 395 TEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE F + + + ++ ++ G + +DDFGTGYSSLSYL+ L +D +KI + FV ++ Sbjct: 929 TESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDID 988 Query: 454 YK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + I MAK+L +K++AEG+E +Q +L HG H QG+ ++K +P ++ Sbjct: 989 TDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEVP 1048 Query: 510 RWA 512 + Sbjct: 1049 SFI 1051 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 17/299 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I A M Q K R + + + R+L+R QS L+ A+E ++ Sbjct: 472 TLIKHADIAMYQAKEKGRNNYQFFRADMN---------ERVLQR-QSLESSLRLALERQE 521 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 +HYQP ++L G I G EAL RW + + P SFI +A+ GL +P+ +++ Sbjct: 522 FLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEAC 581 Query: 344 EDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 + +W+ +++N+ + + + + ++PR + LELTE + Sbjct: 582 RQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKE 641 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + + ++ + AG ++ +DDFGTGYSSLSYL L VD LKID+SFV + + + Sbjct: 642 AEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAI 701 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 II M K+L L ++AEG+ET +Q LR H GQG+ +S+ + L Sbjct: 702 VSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELLNTEL 760 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 97/336 (28%), Positives = 158/336 (47%), Gaps = 20/336 (5%) Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIW 246 I + + E+ + I PE S ++ A M + K R + Sbjct: 1083 QRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRSKEAGRARYTM 1142 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + ++ L+ A+E + V+YQPIVSL N ++G EAL Sbjct: 1143 FDPIM----------HTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGFEALV 1192 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP---QQHISINLE 363 RW + +SP +FIP+A++TGL PL ++R M W Q +S+NL Sbjct: 1193 RWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLS 1252 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLD 422 L + + +++ + + + LE+TE + + + ++ + + ++ +D Sbjct: 1253 GKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSID 1312 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIE 478 DFGTGYSSLSYL L VD LKID+SFV + E + II +A L++ +VAEG+E Sbjct: 1313 DFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVE 1372 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 T + L+Q G +GQG+ +SK L E + W E+ Sbjct: 1373 TEQHLRQLQQLGCEFGQGYFFSKPLESEKIVSWLER 1408 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 92/361 (25%), Positives = 157/361 (43%), Gaps = 17/361 (4%) Query: 162 IDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPE 221 + + + I IG+ + + D + L K + I Sbjct: 548 VARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGS 607 Query: 222 MNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIE 280 ++ A M K R + + + I L+ AI Sbjct: 608 EIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTE----------RMCLESDLRLAIT 657 Query: 281 NRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIR 340 R+ +HYQP + L +G IVG EAL RW +SP FIP+A+++G+ + ++ Sbjct: 658 RREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLE 717 Query: 341 SVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE- 398 + W + +SINL + + +P + +++ ++ ++ LE+TE Sbjct: 718 EACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMS 777 Query: 399 FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK--- 455 A P S ++ +G + +DDFGTGYSSL+YL+ L + LKID+SFV +E Sbjct: 778 MASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPND 837 Query: 456 -NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ++ + +A L L++VAEG+ET Q ++L G QG+L SK LP + R+ Sbjct: 838 ADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIRN 897 Query: 515 H 515 + Sbjct: 898 N 898 >UniRef50_A6V5X2 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=7 Tax=Pseudomonas aeruginosa RepID=A6V5X2_PSEA7 Length = 533 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 135/519 (26%), Positives = 230/519 (44%), Gaps = 24/519 (4%) Query: 3 TRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDA 62 T LVG + G+ +++ L +Q + + L +Y+ RA ++++ Sbjct: 23 TTTLVGGVCGIFVINEL----------DRQHDGA---HLASYTEMALERALEISSAADQM 69 Query: 63 LQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESP-PDTFPEPG 121 L E+ ACS+ L +R + R++ +V I N C+ + P P Sbjct: 70 LAEMNAGSAPACSDRDLEMLRSIVLESRFMSDVGRISGNQVICTGVRGRLRAPWGLSAPD 129 Query: 122 KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH 181 ++ + G R W + + + +V I P ++ DV + AA+ N Sbjct: 130 RVDRAGTRFWSEGMPLPLQVLPTGLVARGNAIVFIAPHAYFDVDHPDAGISAAAVSANGD 189 Query: 182 NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGW-- 239 + + E E +G P+ ++ +++ + L Sbjct: 190 YIYHRFAGEQRPA---PEMPGRPAWPEVSGARQASRCEPDQDLCVVSHLRERGLLNTEPD 246 Query: 240 HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 + + GL G++ + L + RL A++ + VHYQPIV LA+G+ Sbjct: 247 RAAMAAAMGGGLFFGVMLLLSYLFGFLSDEKLPARLLRALKREALEVHYQPIVRLADGRC 306 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHIS 359 +G EALARW + +SPD FI +++G + LT + R +G LR+ P ++S Sbjct: 307 IGVEALARWTDSSLGRVSPDIFIGALEESGDIQLLTRFVFRRALRQLGPLLRKEPGFYVS 366 Query: 360 INLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEI 419 IN+ + + + +V P Q+ALELTER ++R RE G +I Sbjct: 367 INVTGKDIANPGFIDFAIRQMARERVLPAQVALELTERTTEAQVCLLAGMNRLRELGLKI 426 Query: 420 YLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIE----MAKTLKLKMVAE 475 Y+DDFGTG+S+L YL +L VD +KIDK F ++ I + MA+ L++ +V E Sbjct: 427 YVDDFGTGHSNLVYLANLPVDAIKIDKVFTQSIGESEAVELIFDKLCSMAEQLQIGVVVE 486 Query: 476 GIETSKQEEWLRQHGVH-YGQGWLYSKALPKEDFLRWAE 513 GIET Q +++ + GQGW + +AL E FL + Sbjct: 487 GIETQAQADYVSRRSPEALGQGWHFGRALALEAFLAYYR 525 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 19/310 (6%) Query: 214 YDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 + PL N+ S++ A T M Q K R + + + + Sbjct: 339 ISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAM----------GEEAFKRMEM 388 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 L+ AIE + YQP V L++G+I+G EAL RW + +SP FI L + T L Sbjct: 389 ERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIENTNLI 448 Query: 332 EPLTLLIIRSVFEDMGDWLRQHP--QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 P+ ++ + W HP +++N + + + + + + Sbjct: 449 LPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQADLVETVAKALQKSGLAAEF 508 Query: 390 IALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE D + + + +E G I +DDFGTG+SSL+YL+ +DILKIDKSF Sbjct: 509 LELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSF 568 Query: 449 VDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 +D +++ + I EMA +L ++++AEG+ET Q E+LR HG QG+L+S+ +P Sbjct: 569 LDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVP 628 Query: 505 KEDFLRWAEQ 514 E ++ Sbjct: 629 PEQIAEILQK 638 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 100/361 (27%), Positives = 166/361 (45%), Gaps = 26/361 (7%) Query: 161 FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP 220 FI ++P S +AA+ V + E+ ++T ++G Y+ Sbjct: 588 FIILLPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYE----- 642 Query: 221 EMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI 279 +++ A M K R + + L R I + +L+ A+ Sbjct: 643 ----TLVRNADAAMYHAKSSGRNSYKFYTADLNA----------RAREILAIESQLRFAL 688 Query: 280 ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLII 339 E + +HYQP V + +G+IVGAEAL RW L P FI +A++ G + +I Sbjct: 689 ERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVI 748 Query: 340 RSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 + +W R P+ ++INL + + ++ + + + +E+TE Sbjct: 749 AEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESI 808 Query: 399 FA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----E 453 D + + I + G + +DDFGTGYSSLSYL+ D LKID+SFV + + Sbjct: 809 IMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDAD 868 Query: 454 YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 + II MAK L +++VAEG+ET +Q ++L Q G + QG+L +K LP +DF Sbjct: 869 DSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELLH 928 Query: 514 Q 514 + Sbjct: 929 K 929 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 89/359 (24%), Positives = 153/359 (42%), Gaps = 17/359 (4%) Query: 162 IDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPE 221 + + + + IG AH+V ++ +AQ T H + I Sbjct: 459 VARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGISLFPDDSA 518 Query: 222 MNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIE 280 +++ A T M K R F + + R +L+ A+ Sbjct: 519 DPAALMRNADTAMYHAKAAGRAKFQFYTDEMN----------RAATARLDLERKLRGAVA 568 Query: 281 NRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIR 340 + + YQP +G + G EAL RW ++P FIPLA++TG+ + ++R Sbjct: 569 RGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLR 628 Query: 341 SVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF 399 WL P+ IS+NL L + + + + + P + LE+TE Sbjct: 629 EACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAV 688 Query: 400 AD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN-- 456 D P + ++ + G I +DDFGTG+SSLSYL+ +D LKID+SF+ +E+ Sbjct: 689 MDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDAND 748 Query: 457 --VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 + + +A L L ++AEG+E++ Q LR+ G QG+ +S+ + + Sbjct: 749 TMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVENLLR 807 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 137/251 (54%), Gaps = 10/251 (3%) Query: 269 QSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQT 328 L+ A+ + ++YQP + + +G+++G EAL RW ++PD FIPLA++T Sbjct: 312 LELETSLRQALGQKQFRLYYQPQIDIVSGRVLGLEALLRWHHPTQGMIAPDRFIPLAEKT 371 Query: 329 GLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 GL P+ ++R + +++NL + + + ++R +++ + P Sbjct: 372 GLIIPIGEWVLREACSQVATQH----GLKVAVNLSARQFHQKDLVAMIRRILDETGMPPV 427 Query: 389 QIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 + LE+TE D + + + + + G + LDDFGTGYSSLSYL+ +D+LKIDKS Sbjct: 428 NLELEITESALIYDVELAIATMEQLNDLGVSVSLDDFGTGYSSLSYLKRFPIDMLKIDKS 487 Query: 448 FVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 F+D + + + II MA +L LK++AEG+ET Q LR+HG QG+L ++ L Sbjct: 488 FIDEVTTDPDSNVIVKTIIVMAHSLGLKVIAEGVETK-QLTMLREHGCDQAQGYLIARPL 546 Query: 504 PKEDFLRWAEQ 514 ++ L A Q Sbjct: 547 LCQEALEVAAQ 557 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 24/365 (6%) Query: 162 IDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP- 220 + + + + +G + +A+ ++ L++ + I P Sbjct: 632 VARLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPF 691 Query: 221 ----EMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRL 275 ++ A M Q K R + + + A + L Sbjct: 692 NARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSA----------NAALSTDL 741 Query: 276 QDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLT 335 + + VHYQP V +I G EAL RW +SP FIP+A++TGL PL Sbjct: 742 RAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLG 800 Query: 336 LLIIRSVFEDMGDWLR--QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++ + W + + I++N+ ++ I H + P + LE Sbjct: 801 QWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLE 860 Query: 394 LTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE AD + + + + G + LDDFG GYSSLSYL+ L +D LKIDKSF+ + Sbjct: 861 LTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADV 920 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + II +A++L L ++AEG+ET Q +L G Y QG+L+ LP +F Sbjct: 921 FSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEF 980 Query: 509 LRWAE 513 + + Sbjct: 981 EAFMQ 985 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 17/306 (5%) Query: 218 PLPEMNISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 + + ++ A + K R + + + R + R++ Sbjct: 249 LDADSSAQLVKHAENALHYAKVSGRNQYQFFSKDMN----------RKAKSRLELEGRMR 298 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 A+ N++ V YQP VS IVGAEAL RW + + P FIP+A+++G EP+ Sbjct: 299 RALANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGT 358 Query: 337 LIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 ++R W +S+N+ + S + Q + ++++ ++P+ + LE+T Sbjct: 359 WVLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEIT 418 Query: 396 EREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY 454 E D T+ + R+ G + +DDFGTGYSSLSYL + LKID++F+ ++ Sbjct: 419 ESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDT 478 Query: 455 K----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + II +++ L L++VAEG E ++ +LR +G QG+ YS+ +P ++F R Sbjct: 479 NPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADEFER 538 Query: 511 WAEQHL 516 Q + Sbjct: 539 MMGQRV 544 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 95/356 (26%), Positives = 170/356 (47%), Gaps = 18/356 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + + + V +D+I + + + I + P + ++ Sbjct: 989 GGDEFALLLPDLGRDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETL 1048 Query: 227 ITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 + A T M K R F + G+ + +LA + VL L++AI ++ Sbjct: 1049 LRNADTAMYHAKQQGRNQFRFYDPGMNVDILARLTVL----------SELREAIPAGELR 1098 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 +QP + LANG +VGAEAL RW LSPD FIP+A+ L ++ ++ Sbjct: 1099 TFFQPEIDLANGTLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRH 1158 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK- 403 + W + + +NL + ++ ++ ++ Y V + LELTE D Sbjct: 1159 LAQWKKADQAPITVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADA 1218 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTP 459 + ++ G + +DDFGTGYSSLSYL++L + LKID+SFV + + + ++ Sbjct: 1219 QTMIVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISG 1278 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 ++ + +L LK++AEG+ET +Q L + G +GQG+L+S+ L ++F++W +H Sbjct: 1279 TVVALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKEFIKWRMEH 1334 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 99/367 (26%), Positives = 167/367 (45%), Gaps = 21/367 (5%) Query: 160 SFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDIL 217 S D I ++G + + ++ + + Q + I + Sbjct: 694 SLADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLF 753 Query: 218 PLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRL 275 P + S+I T M K F + + L + +RL Sbjct: 754 PDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALG----------RMTMKNRL 803 Query: 276 QDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS-WLSPDSFIPLAQQTGLSEPL 334 + A+E + ++YQP ++ +VGAEAL RW Q + +SP FIPLA++TGL P+ Sbjct: 804 RRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPI 863 Query: 335 TLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 ++R W + P I++NL + + + ++ + + LE Sbjct: 864 GEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELE 923 Query: 394 LTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 +TE D T+ + + ++ G + LDDFGTGYSSLSYL++ +D LKID+ FV L Sbjct: 924 ITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDL 983 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 E + V II +A +LK+++VAEG+E + Q +LRQ G QG+ +S+ LP ++F Sbjct: 984 STDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEF 1043 Query: 509 LRWAEQH 515 ++ Sbjct: 1044 EQFLRSQ 1050 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 88/338 (26%), Positives = 157/338 (46%), Gaps = 18/338 (5%) Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQV 243 T +++I + L E I + + P + +++ A M K + Sbjct: 745 TLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKNT 804 Query: 244 FIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAE 303 + + + + + R+Q L+ A+E + +H+QPIV+ A ++ E Sbjct: 805 YQFFAAEMNA---------QAIERLQ-LERGLRQALERGEFELHFQPIVAAATYRLEALE 854 Query: 304 ALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINL 362 L RW + +SP FIPLA++TGL P+ +IR + +W ++INL Sbjct: 855 VLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINL 914 Query: 363 ESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYL 421 + + + + + + ++ LE+TE +P + ++ + G + + Sbjct: 915 SARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSI 974 Query: 422 DDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGI 477 DDFGTGYSSLSYL+ +D LKID+SF++ L + + I+ MA+ L +VAEG+ Sbjct: 975 DDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGV 1034 Query: 478 ETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 ET Q +L G QG+L+S+ LP + + +Q Sbjct: 1035 ETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQR 1072 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 86/248 (34%), Positives = 136/248 (54%), Gaps = 6/248 (2%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 + L A+ N ++ ++YQP V L G+I G EAL RW + + PD FIP+A+ GL Sbjct: 441 LENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGL 500 Query: 331 SEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 P+ ++R+ W R+ HP I++NL + + + ++R + + P Sbjct: 501 ILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEETGLAPDS 560 Query: 390 IALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LELTE D A + + G + LDDFGTGYSSLSYL+DL +D++KID+SF Sbjct: 561 LELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSF 620 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 +D + E ++T II MA++L ++ VAEG+ET Q +L +H H QG+ +S + Sbjct: 621 LDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVT 680 Query: 505 KEDFLRWA 512 ++ Sbjct: 681 GDEIADML 688 >UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella RepID=Q7W9Y7_BORPA Length = 524 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 133/520 (25%), Positives = 237/520 (45%), Gaps = 10/520 (1%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 +R L GL + + +V+ P L++ + + E+ + R+ R A + Sbjct: 5 LRKALLTGLWTAAALGAVIGPSLLAVDMVREYGLRQQREQAQVLAQRLLGRIGLTADRLL 64 Query: 61 DALQELERWQGA-ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPE 119 +EL G+ C+ M++ + ++ VAY++ CSSL Sbjct: 65 RIHRELVHTGGSSPCAPYSTYLMQQQVLRFPDVRAVAYVEEGRVLCSSLGDTVTGVDLGP 124 Query: 120 PGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVI-PYSSWQIDAAIIG 178 + + VW ++ Y ++++ S + + G Sbjct: 125 SDFTTGNRISVWNSAVLPAAPETPFRVFAKEGYAIIMERESTNQLGGAVPQAMAAVSFSG 184 Query: 179 NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKG 238 + ++ + + +++ ++ + +++ AS++ + Sbjct: 185 TPDDAIVWGE---LPRAWFKRARESNAFVDDKYVVAVQRSTAQGLVALGAVASSQG-AEA 240 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 R + +PL GL + + + RR S ++ + + + YQP+V + G+ Sbjct: 241 LQRLAILLVPLSAAAGLGLLVGAVILARRQFSLPQLIRSGLRRNEFYMVYQPMVEVGTGR 300 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI 358 VGAEAL RW + +G ++PD FI A++ GL +T + V D+ W + +I Sbjct: 301 CVGAEALIRWRRRNGDLIAPDVFIDEAERVGLIGKITERVFELVSSDVQRWRGRLGDLYI 360 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE 418 SIN+ + + S +LL +M + P Q+ +ELTER + I R+ G Sbjct: 361 SINVSAADMASGAAERLLSEMFARTGLTPSQVVVELTERALLHSDEAVAAIKIIRKMGGR 420 Query: 419 IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVA 474 + +DDFGTGYSSL+YL +VD LKIDK FVDA+ +V+ HIIEMAK+L L++VA Sbjct: 421 VAIDDFGTGYSSLAYLTSFEVDGLKIDKRFVDAIGRDAPSSSVSVHIIEMAKSLGLRVVA 480 Query: 475 EGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 EG+ET+ Q+ +L +HGV Y QGWL+ + +P + L A + Sbjct: 481 EGVETAGQQRFLSEHGVDYAQGWLFGRPMPLNELLAMARR 520 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 89/362 (24%), Positives = 170/362 (46%), Gaps = 19/362 (5%) Query: 163 DVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR--LQKTPGEHIENNGIIYDILPLP 220 D++ ++ + + + E + + + L H + I Sbjct: 876 DIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDG 935 Query: 221 EMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI 279 + +++ A M K R + + + ++ Q L+ AI Sbjct: 936 DSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNT----------LVTERQQIETGLRQAI 985 Query: 280 ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLII 339 ++ ++YQP V +++G++VG EAL RW + ++PD FIP+A++ + P+ ++ Sbjct: 986 ACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVL 1045 Query: 340 RSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 + + +W + +++NL + L + I + +++ +++ + LE+TE Sbjct: 1046 ENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESV 1105 Query: 399 FAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK-- 455 P+ +A +++ R+ G E+ +DDFGTGYSSLSYL+ L +D LK+D+SFV +E Sbjct: 1106 AMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPN 1165 Query: 456 --NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 ++ I MA L L +VAEG+E Q L G QG+ +SK L +D R+ E Sbjct: 1166 DAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIE 1225 Query: 514 QH 515 ++ Sbjct: 1226 RN 1227 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 87/354 (24%), Positives = 153/354 (43%), Gaps = 18/354 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + A+ G + + + + + E + I P ++ ++ Sbjct: 235 GGDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETL 294 Query: 227 ITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 + A T M K R F + + L + L+ A+ + Sbjct: 295 LRNADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLL----------MESNLRRALVQNEFI 344 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 +HYQP+V+L G I+G EAL RW + + PD FI +A++TGL P+ ++ Sbjct: 345 LHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQ 404 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPK 403 W P +++N+ +++ + ++ ++ LELTER D Sbjct: 405 AKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDAD 464 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTP 459 + +S G E+ LDDFGTGYSSL+YL+ V LKID+SFV+ LE + Sbjct: 465 INMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIAS 524 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 I+ M ++L++ ++AEG+E +Q LR+ G QG+ +S+ + + Sbjct: 525 TIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 86/253 (33%), Positives = 137/253 (54%), Gaps = 6/253 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 ++ + L++AI + +HYQP V + G+I+GAEAL R + +SP FI +A Sbjct: 883 HKLLTMGAELRNAISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVA 942 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 ++TGL P+ +IR M W ++ + I+INL L +P+++ ++ Sbjct: 943 EETGLIIPMGTWVIREACRQMQQWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSG 1002 Query: 385 VNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 +N R + LE TE + + + I+++++ G + +DDFGTGYSSLSYL+ VD LK Sbjct: 1003 LNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLK 1062 Query: 444 IDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SFV + + II + +TL + +AEG+ET Q +LR QG+LY Sbjct: 1063 IDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLY 1122 Query: 500 SKALPKEDFLRWA 512 S LP E+F Sbjct: 1123 SAPLPAEEFAALL 1135 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 147/298 (49%), Gaps = 17/298 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A T M K R + + + L+R+Q H L+ A+E Sbjct: 922 ALMKNADTAMYHAKSQGRDNVQFFTPEMNQSV---------LKRLQ-FDHDLRVAVEAGQ 971 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 +HYQP ++ +G++V EAL RW +SP FIP+A++TGL PL ++ Sbjct: 972 FELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEAC 1031 Query: 344 EDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFAD 401 + W +++NL + L S + ++ + ++ + + LE+TE D Sbjct: 1032 RQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRD 1091 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NV 457 S + R+ G + +DDFGTGYSSLSYL+ L +D LK+D+SFV +E+ + Sbjct: 1092 TTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAI 1151 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 I +A +L L++VAEGIET Q L H + QG+L+S LP E L + + Sbjct: 1152 CAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQ 1209 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 94/375 (25%), Positives = 168/375 (44%), Gaps = 26/375 (6%) Query: 147 MGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEH 206 + ++ V I F+ V+ A+++ V + II Sbjct: 1152 LRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSL 1211 Query: 207 IENNGIIYDILPLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRIL 265 ++G+ I ++ A + M K R + + + + Sbjct: 1212 FPDDGMDTAI---------LLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLF---- 1258 Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 + L+ A++ + + YQP + L++ + VG E L RW + +SP FIP+A Sbjct: 1259 ------ENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIA 1312 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQ 384 +Q+GL + + ++ WL Q HI++N+ +P + L++D ++ Sbjct: 1313 EQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSG 1372 Query: 385 VNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 + + LELTE + + ++ G + +DDFGTGYSSLSYL+ L ++ LK Sbjct: 1373 LPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLK 1432 Query: 444 IDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 IDKSFV + + ++ +I + K L L+++AEG+E Q +LR+ G H QG+LY Sbjct: 1433 IDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLY 1492 Query: 500 SKALPKEDFLRWAEQ 514 SK LP E+ + + Sbjct: 1493 SKPLPPEEITQLFAE 1507 >UniRef50_Q8E9W7 Putative uncharacterized protein n=1 Tax=Shewanella oneidensis RepID=Q8E9W7_SHEON Length = 500 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 129/519 (24%), Positives = 228/519 (43%), Gaps = 36/519 (6%) Query: 7 VGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQEL 66 +G I ++I V+ +GL + ++ + + D S +A + T+ + + E+ Sbjct: 1 MGKIKYIIIFLVVFALGLVLVKGVDRIIANSVIARD--SEMLASKFQMYITESAEQILEM 58 Query: 67 ERW-QGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISK 125 R G C+ +++ ++ +++ +A +N C S P D + Sbjct: 59 PRLDPGVTCTAELESLLKQKTFDSSFVRWLAIYKDNQVLCQS--GVIPHDLTALKAHKVR 116 Query: 126 DGYRVWLTSHN-----DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 + + + SHN +L ++R+M + + + P F+ V + Sbjct: 117 ENLSIAVASHNTQTSHELFLMRHMEGIDYIASITPLRPRYFVPVDCERCLE--------- 167 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHI--ENNGIIYDILPLPEMNISIITWASTKMLQKG 238 + V + S I G + H+ E N + L + + ++ Q G Sbjct: 168 YKVSLDSDPYIEFGFDNFADEPVVYHVVQEQNPYYHATFELSGNRVFLEQYS-----QLG 222 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 W + + G+V+GLLA + R S +++ I+ + +YQPIV + G Sbjct: 223 WR----VSVATGIVLGLLACLVYWRWNNHQISLDSQIKRGIQRGEFIPYYQPIVDSSTGM 278 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI 358 VGAE L RW + D + P+ FIP A+ G P+T ++ V D+ Q P Sbjct: 279 PVGAEVLVRWLRHDNRMIPPNQFIPFAEARGHILPMTTSMLNKVINDIQLLGGQSPPLFF 338 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGH 417 SIN+ L ++ L++++ + +++LE+TER D + + + G Sbjct: 339 SINIVPAHLENDDFYHQLQEIVESGMLGHHRLSLEITERLPIKDMTLARQTLDKIYALGI 398 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK-----NVTPHIIEMAKTLKLKM 472 ++ LDD GTGY SY+Q L + LKIDK FVD + II A KL + Sbjct: 399 DLKLDDAGTGYGCFSYVQHLGISTLKIDKMFVDTIGQSHNFNGKTLDAIISFANESKLHV 458 Query: 473 VAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 +AEG+ET +Q+ +L + GV QG+ YSK L EDF ++ Sbjct: 459 IAEGVETVEQQGYLGELGVKLIQGYYYSKPLAAEDFFKF 497 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 31/403 (7%) Query: 134 SHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG---NAHNVVITSSDE 190 HN+ + VA + + + + I + + A + G A T +D Sbjct: 248 GHNNGDRLLRQVARRLNDVIEQANLRAVLCRIGGDEFAVIAELSGRAQIAETEAATLADG 307 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDI----LPLPEMNISIIT-WASTKMLQKGWHRQVFI 245 +A+ I+ L + + + P ++ ++T A T M H Sbjct: 308 LAKRILAALGAPFSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYHAKNH----- 362 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG-------- 297 G + + RR L+ A++ ++ + YQP V L+ Sbjct: 363 ----GKNAAASFTSEMDQQARRRLRVEADLRRALDREELLLAYQPQVRLSTDDAHDAVIS 418 Query: 298 --KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HP 354 + G EAL RW + + P FI +A++TGL PL L ++R+ + W+R+ Sbjct: 419 RANVYGVEALVRWRHPEIGLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDGV 478 Query: 355 QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYR 413 +++NL + + + + D++ + P Q+ LE+TE D + + ++ Sbjct: 479 TLRVAVNLSARQTRDPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLH 538 Query: 414 EAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL--EYKNVTPHIIEMAKTLKLK 471 AG + +DDFGTGYSSL+YLQ + LKID+SFV + + + + +I MA +L+++ Sbjct: 539 AAGISLSIDDFGTGYSSLAYLQRFPIQKLKIDRSFVQRMPGDGEAIAGAVIAMAHSLRMQ 598 Query: 472 MVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +VAEG+E +Q LR G GQG+L+S+ + + W + Sbjct: 599 VVAEGVEDPEQLALLRDAGCDLGQGYLFSRPQQADALMAWLNR 641 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 100/381 (26%), Positives = 167/381 (43%), Gaps = 26/381 (6%) Query: 142 RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQK 201 R + +A V + F+ V+P + I AA ++ + + Sbjct: 500 RLQDTIRSADIVARLGGDEFVVVLPLINSNISAAHAVRKIQQTLSQGYTVESHELNITPS 559 Query: 202 TPGEHIENNGIIYDILPLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMF 260 +G E ++ A M K R + + + + + A + Sbjct: 560 IGISVYPTDG---------ETVQELMKNADLAMYHAKSAGRNSYQFFTQEMNLTVQARLV 610 Query: 261 VLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 L+ A+E ++ +HYQP + L +G++VG EAL RW ++PD Sbjct: 611 ----------LESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDV 660 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDM 379 FIP+A+ TGL + ++S E + W+ Q +++NL + +P LL D+ Sbjct: 661 FIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADI 720 Query: 380 INHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 + V + LE+TE DP T+ + RE G E+ +DDFGTGYSSLSYL+ Sbjct: 721 LAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFP 780 Query: 439 VDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 V+ LKID+SFV ++ + + I +A L ++VAEG+ET Q +LR Sbjct: 781 VNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDIL 840 Query: 495 QGWLYSKALPKEDFLRWAEQH 515 QG+ +S+ L + + Sbjct: 841 QGYFFSEPLSAAGIASYLAAN 861 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 99/392 (25%), Positives = 175/392 (44%), Gaps = 28/392 (7%) Query: 142 RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSD----------EI 191 + +MG A ++ + I A + G+ +++ S I Sbjct: 224 HFNDSMGHAFGDQLLIALAGILARCSREMDTVARLSGDEFTIIVDSISGQKDLDILCWRI 283 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPL 249 + Q E + I I PL + + + ++ A M K R + Sbjct: 284 LDALKLPQQIMGREIFISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRNTYRHYAA 343 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 G+ + L S L+ AIE + ++YQP ++L +G++VG EAL RW Sbjct: 344 GMQLYSLD----------RMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWH 393 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT 368 L+P FI +A++TGL + +I WL++ IS+N+ + Sbjct: 394 HPQRGLLTPIHFIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFY 453 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTG 427 ++ ++ ++NP + ELTE F D + + G ++ +DDFGTG Sbjct: 454 QSDFCDMVEHILKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTG 513 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YS+LSYL+ +D LK+D+SF+ +E + + I+ +A+++ L++VAEG+ET + Sbjct: 514 YSNLSYLRKFPIDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVEL 573 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 W G + QG+ +S+ LP E F RW ++ Sbjct: 574 HWAESSGCTFVQGYRFSQPLPAEKFTRWVREY 605 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 18/372 (4%) Query: 149 TAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIE 208 + A F+ + + I + ++V++ ++I I LQ Sbjct: 406 AGRMRASVRKADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQV 465 Query: 209 NNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILR 266 + + P ++ A M K R + R Sbjct: 466 SCSMGVACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAA---------RAHE 516 Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 R+Q L++A+ + +H+QP ++L G+I AEAL RW +SP FIPLA+ Sbjct: 517 RLQWQE-ELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAE 575 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQV 385 +TGL P+ +R+ + W P IS+N+ + + +++ + Sbjct: 576 ETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGL 635 Query: 386 NPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 R + LELTE D + + G + +DDFGTGYSSLS L+ V LKI Sbjct: 636 EARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKI 695 Query: 445 DKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SFV + + +T II +A+ L L+++AEG+E+ Q E+L++ G QG+ +S Sbjct: 696 DRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFS 755 Query: 501 KALPKEDFLRWA 512 + L E F Sbjct: 756 RPLSAEAFESLL 767 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 153/295 (51%), Gaps = 18/295 (6%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++ A M K R F + + LA + L+ A+ENR+ Sbjct: 466 DLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARL----------QMEMALRQAVENRE 515 Query: 284 ICVHYQPIVSLANG-KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 + ++YQP LA+ ++GAEAL RW +G ++PD FIPLA+++GL + +I Sbjct: 516 LLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEA 575 Query: 343 FEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD 401 + W Q Q +++N+ + + + +++ + +++ LELTE + Sbjct: 576 CRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILME 635 Query: 402 -PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN---- 456 P+ +A +++R G I LDDFGTGYSSL+YL + +LKID+SFV L +++ Sbjct: 636 KPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAAL 695 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + II +A + L++VAEG+ET +Q +L+ G QG+L+S LP E F + Sbjct: 696 IADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 92/354 (25%), Positives = 151/354 (42%), Gaps = 18/354 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + + G + ++ + + E I + P + ++ Sbjct: 698 GGDEFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTL 757 Query: 227 ITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 A M K R + + + R + L+ A+E Sbjct: 758 WRSADAAMYRAKQSGRNDYCFFTTEMQA----------RSARTLQIDNALRRALERNQFS 807 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 + YQP +SL +IVG EAL RW PD FIP+A+ G P+ ++++ Sbjct: 808 LVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQ 867 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPK 403 + W IS+NL + ++P+L+ ++ V+P + LELTE +P Sbjct: 868 LRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPL 927 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTP 459 + +I R+ G I +DDFGTGYSSL+YL+ +V LKID+SFV L + Sbjct: 928 AAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVS 987 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +I +A +L + VAEG+ET +Q E+LR G QG+ S+ L + + E Sbjct: 988 AVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFSFIE 1041 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 93/309 (30%), Positives = 157/309 (50%), Gaps = 20/309 (6%) Query: 216 ILPLPEMNIS---IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 I P ++ ++ + M K R + + L++ + Sbjct: 512 IALSPNDGVTSAELLKNSDMAMYKAKELGRNNYKFYTNELIL----------RSEKRLYI 561 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + L+ AI+N ++ + +QP +S ++ GAEAL RW + W+ P FIP+A+ +G+ Sbjct: 562 ENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHPERGWVPPIEFIPVAEDSGII 621 Query: 332 EPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 E + ++ W ++ P +SIN+ L ++ I Y +NP +I Sbjct: 622 ERIGDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQLARANWSHRVQATILQYGINPEEI 681 Query: 391 ALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE +P+ S E G ++ +DDFGTGYSSLSYL+ ++ D++KID+SFV Sbjct: 682 ELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSLSYLKKINADVIKIDRSFV 741 Query: 450 DALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 LE + + II MA +L L+++AEG+E Q + L G H QG+LYSK LP+ Sbjct: 742 VDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLHDLGCHMIQGYLYSKPLPE 801 Query: 506 EDFLRWAEQ 514 ++F+ + ++ Sbjct: 802 DEFVVFVQK 810 >UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNC8_CLOCL Length = 584 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 85/253 (33%), Positives = 136/253 (53%), Gaps = 6/253 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 R + L AIE + YQP VSL GK+VG EAL RW +SP FIP+ Sbjct: 328 NRRTILENDLMTAIEKGQFFLVYQPQVSLNTGKMVGVEALIRWSHPKLGLISPFEFIPIV 387 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 +++GL + + +IR+ +W + P +++N+ S L I ++++D++ Sbjct: 388 EESGLIDSIGEWVIRTSCIQAKEWRDKKLPFFKVAVNISSIQLKKMNICKIIKDILKELS 447 Query: 385 VNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 ++P + +ELTE D + + G +I +DDFGTGYSSL+YL+ +D LK Sbjct: 448 LDPNVLEVELTESAMMEDIELAIENFRELNNMGIKIAIDDFGTGYSSLNYLRKFSIDKLK 507 Query: 444 IDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SFV L +T II+MAK L K++AEG+ET + ++L ++G QG+ + Sbjct: 508 IDRSFVTELGDDFESTIITKTIIDMAKNLSFKVIAEGVETKEHLKYLMENGCDEVQGYYF 567 Query: 500 SKALPKEDFLRWA 512 SK + E+ + Sbjct: 568 SKPITAEEVEEFV 580 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 5/250 (2%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 + H + AI+ ++ + YQP L +G +VG EAL RW + P FIP+A++ Sbjct: 378 RLTLQHEMYRAIQRKEFILLYQPQYDLVSGMMVGVEALVRWRHPAKGMIPPGEFIPIAEE 437 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVN 386 +G+ + ++ W P +S+NL + + + ++ + Sbjct: 438 SGMIVQIGDWVLEEACRQNKAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGLK 497 Query: 387 PRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 P + LE+TE D + + + G I +DDFGTGYSS YL++ +D LKID+ Sbjct: 498 PEYLDLEITESMTMDTGHVSRCLLELTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKIDR 557 Query: 447 SFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFV ++ + II MA L ++++AEG+E ++Q E+LR+H QG+ +S Sbjct: 558 SFVRDIQQDPSDAEIVAAIIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWSPP 617 Query: 503 LPKEDFLRWA 512 + D + Sbjct: 618 VSSTDIEQML 627 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 26/366 (7%) Query: 163 DVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDI-----L 217 D + S A I+ N ++ +A+ ++T +Q+ + + I Sbjct: 434 DTVARLSSDEFAIILPGIKNS--RTTAHVAEKVLTAIQQPVLINETEQRLTASIGIAIAP 491 Query: 218 PLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 +II A + K R + + + + I L+ + + H L+ Sbjct: 492 QNGTDAKTIIKNADLALFHAKDNGRNNYQFFTVEMNIQLIDRV----------ALTHDLK 541 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 A++N D + YQP + L G +VG EAL RW + P FIP+A+QTGL PL Sbjct: 542 QAVKNSDFTLVYQPKICLKQGNLVGFEALIRWNHKIRGAVGPTEFIPVAEQTGLIIPLGR 601 Query: 337 LIIRSVFEDMGDWLRQ---HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 +I + E + + + +++NL + E + +RD IN + + P Q +E Sbjct: 602 WVITTACEQLRTMYDEEIVNDSVSMAVNLSAHQFQDEHLVDFIRDRINTFDIKPGQFEIE 661 Query: 394 LTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE + + + R+ G +I +DDFGTGYSSL YL+ L V+ +K+D+SFV + Sbjct: 662 LTESVLMENFDNAIEKLEALRQLGIQISIDDFGTGYSSLGYLKRLPVNTVKVDRSFVTDI 721 Query: 453 EYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 +T +I MA L +VAEG+ET +Q ++L G YGQG+ +SK LP + Sbjct: 722 PNDKSDMEITSAVIAMAHNLNYTVVAEGVETEQQLQFLEHSGCDYGQGYFFSKPLPDHEL 781 Query: 509 LRWAEQ 514 + Sbjct: 782 ELFCAN 787 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 146/301 (48%), Gaps = 19/301 (6%) Query: 220 PEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 P+ +++ A M Q K R + + + + H L+ A Sbjct: 295 PKSKETLLKQADIAMYQAKEKGRNRICFYDP----------LMQENIEHKTTMEHELRMA 344 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 + ++ + YQP V+L GKIVG EAL RW + P++FIPLA++TGL P+ + Sbjct: 345 LSKEELILFYQPQVNLE-GKIVGVEALLRWNHPQKGLIPPNTFIPLAEETGLIIPVGSWV 403 Query: 339 IRSVFEDMGDWLRQHP--QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 + + + +W + P H+SIN+ + + + + I + I LELTE Sbjct: 404 LHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEASFYETVANAIALSGSDAGSIKLELTE 463 Query: 397 REFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 D + I R G LDDFGTGYSSLSYL+ L +D LKID+SFV + + Sbjct: 464 SLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSLSYLKRLPLDELKIDQSFVRDIGHD 523 Query: 456 N----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 N + IIEMA L ++AEG+E +Q +L ++G QG+L+ K +P E+ R Sbjct: 524 NNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLMENGCGLFQGYLFGKPMPPEELERL 583 Query: 512 A 512 Sbjct: 584 F 584 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 98/400 (24%), Positives = 166/400 (41%), Gaps = 17/400 (4%) Query: 122 KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH 181 IS GY+ + G R + + + S + + + Sbjct: 246 YISLTGYKAIVDVFGHDGESRIIKPLSRQIVAAVRQHDSVARIRHDEFAVMLGGV--TND 303 Query: 182 NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHR 241 V T + + Q L + GE + P ++ + R Sbjct: 304 GDVTTILNRLQQIFAVPLPTSQGECAI--PACMGVACFPTDGLTANIIMQNAHIAMNQAR 361 Query: 242 QVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVG 301 Q G+ + + + + R L+ AI+ + + YQP V + + K+ G Sbjct: 362 QA------GIPLQFYSESMNRKAMERFAIETCMLR-AIDAGEFFLCYQPKVEIHDMKLTG 414 Query: 302 AEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISI 360 EAL RW + + PD FI LA++ G+ L I+ W P+ +S+ Sbjct: 415 VEALVRWQRPGEGVIPPDRFIALAEENGMIVRLGGWILGEACRQNRAWQDAGLPRTVVSV 474 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEI 419 N+ + L + + ++ + P + LELTE A+ ++R ++ G I Sbjct: 475 NISARQLRENSFVEQVERILEETGLEPCYLDLELTESVVMANSDEIVQKLTRLKQLGVGI 534 Query: 420 YLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAE 475 +DDFGTGYSSLSYL+ L VD +K+D+SFV + + K + +I M L L ++AE Sbjct: 535 SVDDFGTGYSSLSYLKHLPVDTIKVDRSFVRDIVHDPDDKAIVEAVIAMGHALGLTVIAE 594 Query: 476 GIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 G+ET +Q E+LR + QG+ +SK L R+ +H Sbjct: 595 GVETLEQLEFLRSQNCNQAQGYYFSKPLDSGHLARFLSKH 634 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 146/265 (55%), Gaps = 7/265 (2%) Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 ++ R + R+ + L+ A+E R+ +HYQP++ + +G+IVG EAL RW + Sbjct: 402 FYSSELNHRAMERL-TLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELG 460 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 +SP FIPLA++TGL P+ ++RS E + + +S+N+ + + Sbjct: 461 MVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFC 520 Query: 374 QLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ ++ ++PR + LELTE + +T+ I+ + ++ G + +DDFGTGYSSLS Sbjct: 521 AMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLS 580 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ +D LKID++FV + + + I+ +A L L +VAEG+ET++Q +L Sbjct: 581 YLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAA 640 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAE 513 QG+ ++ LP + L + E Sbjct: 641 LRCDVVQGYHIARPLPPRNLLEFLE 665 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 72/253 (28%), Positives = 128/253 (50%), Gaps = 8/253 (3%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 + L+ +E + ++YQP++ + + V EAL RW + +SP FIP+A++ Sbjct: 493 RLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHPERGLISPGEFIPIAEE 552 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTSEKIPQLLRDMINHYQ 384 TGL PL ++ + W P +S+NL + + + ++ Sbjct: 553 TGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRHPSLTADIAQILAETG 612 Query: 385 VNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 + P + LE+TE D ++ + ++ G ++ +DDFGTGYSSLSYL+ D +K Sbjct: 613 LPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPTDAMK 672 Query: 444 IDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SF L E + + +I A L+L++ EG+ET +Q E+L + G QG+L+ Sbjct: 673 IDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQGFLF 732 Query: 500 SKALPKEDFLRWA 512 + +P ++ R+ Sbjct: 733 APPMPPDEVARFL 745 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 139/266 (52%), Gaps = 6/266 (2%) Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 L + I+R+ S L+ A+ + +HYQP V + G+IV AEAL RW + Sbjct: 489 LFTSAMTAIVRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGL 548 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQ 374 + P FI LA++T L P+ ++++ W Q IS+N+ + +++ + Sbjct: 549 VYPGDFIALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIE 608 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + ++ ++P + LE+TE D S + G ++ +DDFGTGYSSLS Sbjct: 609 TVATALSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSA 668 Query: 434 LQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ + LKID+SF+ + + +T II +A+ L L+++AEG+ET +Q +L + Sbjct: 669 LKRFPLSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVES 728 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQH 515 G + QG+L+S+ + + F R E + Sbjct: 729 GCNEIQGYLFSRPVEEAQFNRMLENN 754 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 130/242 (53%), Gaps = 8/242 (3%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 + L+ A+E ++ V+YQPI SL G + G EAL RW + +SP FIP+A+ TGL Sbjct: 454 LENDLRRALERQEFEVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGL 513 Query: 331 SEPLTLLIIRSVFEDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNP 387 PL ++ + W Q P +S+NL + + + + ++ ++ Sbjct: 514 IIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDG 573 Query: 388 RQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + LE+TE + +T ++ + R ++ +DDFGTGYSSLSYL V+ LKID+ Sbjct: 574 SFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDR 633 Query: 447 SFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFV + KN + II +A +L++ ++AEG+ET +Q L+ GQG+L+SK Sbjct: 634 SFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKP 693 Query: 503 LP 504 L Sbjct: 694 LT 695 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 94/357 (26%), Positives = 162/357 (45%), Gaps = 26/357 (7%) Query: 161 FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP 220 F+ V+P DA I +T + +T +G + Sbjct: 525 FVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSM---- 580 Query: 221 EMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI 279 ++ A M K R F + + L + H+L+ A+ Sbjct: 581 -----LLRNADAAMYRAKADGRNGFQFYAADMNTHSLGELL----------LEHQLRGAL 625 Query: 280 ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLII 339 + ++ +++QP V+ A+G I G EAL RW D L+P F+P A+++GL P+ ++ Sbjct: 626 DRNELRLYFQPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVL 685 Query: 340 RSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 R + W+ +++NL + I L+R+ + +++ + LELTE Sbjct: 686 REACRQLRAWIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETM 745 Query: 399 FA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----E 453 D + + ++ R G + +DDFGTGYSSL+YL+ DV+ LKID+SFV + Sbjct: 746 LMRDLERTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSS 805 Query: 454 YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + +I +A L L + AEG+ET+ Q+ +L +HG QG+L+ + P E F + Sbjct: 806 DGKIATAVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQ 862 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 9/256 (3%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 + + + L+ AIE + +HYQPI + GK+ G EAL RW + + PD FIPLA++ Sbjct: 999 VINMENELRRAIEGNSLELHYQPIFDVDGGKLEGFEALVRWRHPEHGMIMPDRFIPLAEE 1058 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQHP----QQHISINLESPVLTSEKIPQLLRDMINHY 383 +GL PL ++ + + W + +S+NL + ++ + Sbjct: 1059 SGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQFAQHTLVDMILRALREN 1118 Query: 384 QVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 + P ++ LE+TE DP +A + R +E G + +DDFGTGYSSLSYL+ +DIL Sbjct: 1119 DIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFGTGYSSLSYLRQFPMDIL 1178 Query: 443 KIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID+SF+ E + I++MA +L L++ AEG+ET +Q E L+ QG++ Sbjct: 1179 KIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQEQLERLQSINCDRAQGYM 1238 Query: 499 YSKALPKEDFLRWAEQ 514 +SK + D Q Sbjct: 1239 FSKPMAPGDAGDMIRQ 1254 >UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Arthrospira RepID=B5VW83_SPIMA Length = 655 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 102/361 (28%), Positives = 178/361 (49%), Gaps = 14/361 (3%) Query: 166 PYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS 225 W A + G+ ++ + + Q I++ + H++ I+ + ++I Sbjct: 254 CIPPWHTVARLGGDEFAILFDDLNNLTQ--ISQTAQNIQYHLQQPIILGEQEVFSTVSIG 311 Query: 226 IITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRR----IQSPHHRLQDAIEN 281 I + K R L G + + R + L+ AIE Sbjct: 312 IAISNVSYSNGKEILRDADTALSQAKSKGKACHVIFNPTMHREAWDRMQLENDLRHAIER 371 Query: 282 RDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRS 341 +++ +HYQPI+SL +I+G EAL RW W+SP FIP+A++TGL +P+ ++RS Sbjct: 372 QELQLHYQPIISLETLEIIGCEALIRWEHPKRGWVSPSQFIPIAEETGLIQPIGEWVLRS 431 Query: 342 VFEDMGDWL---RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 E + W Q Q +S+NL + LT+ ++ ++ ++ +P ++ LELTE Sbjct: 432 ACETLHRWQLMFPQGKQPFMSVNLSTYQLTNPQLVNKVQTILEETGCDPCRLKLELTEST 491 Query: 399 FAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK-- 455 A+ + P + E G ++ +DDFGTGYSSLS L + LKID+SF++ ++ Sbjct: 492 IAEYAEVVVPQMRELSELGIKLCIDDFGTGYSSLSRLYHFPIHTLKIDRSFIEGIDESQD 551 Query: 456 --NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 + I+ +A TL L+++AEG+ET +Q L+ G QG+L+SKA+ + ++ Sbjct: 552 QLKIAYAIVNLAHTLGLEVIAEGVETPEQMAVLQAWGCQLCQGYLFSKAVDDQKMEQFLS 611 Query: 514 Q 514 Q Sbjct: 612 Q 612 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 112/378 (29%), Positives = 183/378 (48%), Gaps = 25/378 (6%) Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 IR + +V I F+ ++P + A++ +++ L Sbjct: 456 AIRLQDILHLNAHVARIGGDEFVIILPDVHSDV--ALLETVGDILSVFQQPFDLANHDSL 513 Query: 200 QKTPGEHIENNGIIYDILPLPEMNISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAA 258 + + I +Y + + +++ A T M L K R + + L ++ Sbjct: 514 RVSTSIGI----ALYP--RDGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSVSH 567 Query: 259 MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP 318 + RIQS L AIE + + + +QP +L IVG E L RW + + P Sbjct: 568 V-------RIQS---ALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPP 617 Query: 319 DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLR 377 FIP+A++TGL + + ++ + WL Q + I++N+ + L Q L Sbjct: 618 ADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLS 677 Query: 378 DMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 D++N +++ LE+TE DP+ + +++ RE G EI LDDFGTGYSSLSYL+ Sbjct: 678 DILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSSLSYLKG 737 Query: 437 LDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 L ++ LKID+SFV + + + II M KTL LK+VAEGIET +Q ++L + G Sbjct: 738 LPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCV 797 Query: 493 YGQGWLYSKALPKEDFLR 510 YGQG+L+S+ + E R Sbjct: 798 YGQGYLFSRPVSAEKLFR 815 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 137/253 (54%), Gaps = 5/253 (1%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 S + L+ A+E + + YQP + G ++G EAL RW ++ +SP FIPLA++ Sbjct: 689 RFSLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEE 748 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNP 387 GL P+ ++R W Q I +N+ + E + ++ ++ + P Sbjct: 749 QGLIVPIGEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRP 808 Query: 388 RQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + LE+TE P+ + P + ++RE G + +DDFGTG+SSLSYL+ L ++ LKID+ Sbjct: 809 HLLDLEVTENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKIDQ 868 Query: 447 SFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SFV + + II +AK+L L+ +AEG+ETS+Q +LR HG H QG+ +S+ Sbjct: 869 SFVRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRP 928 Query: 503 LPKEDFLRWAEQH 515 LP E+ + Sbjct: 929 LPAEELPDFVMNQ 941 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 86/297 (28%), Positives = 152/297 (51%), Gaps = 19/297 (6%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A M Q K R + + + ++A L+ AIE+ Sbjct: 491 LLKQADIAMYQSKAAGRNTWHFFNKTMQESIIA----------RADMERDLRKAIEDNQF 540 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQ VS ++G+ +GAEAL RW + +SP +FIPLA++TGL P+ ++ S Sbjct: 541 QLHYQAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACA 599 Query: 345 DMGDWLRQHP--QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 + W + +++N+ + L E + ++ + + +NP ++ LELTE + Sbjct: 600 QLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVEN 659 Query: 403 -KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 ++ + G LDDFGTGYSSL YL+ L ++ +KID+SFV L + + Sbjct: 660 ISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAI 719 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II M+ +L + ++AEG+ET ++ ++L +G + QG+L+SK +P +F ++ Sbjct: 720 VRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINEFEVLLKK 776 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 124/516 (24%), Positives = 229/516 (44%), Gaps = 26/516 (5%) Query: 13 VLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGA 72 +++ + LLP+ L I + + ++ ++ + +A +++ D + +L ++ Sbjct: 14 LIVCAGLLPLVLGILCTAIEARHTVHQQQINTANSLLAQAERMSDSAWDMITDLRQFHYQ 73 Query: 73 ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWL 132 CS +++R Y + + ++ + CSS P + + W Sbjct: 74 PCSAI-EGKLQREGNLNAYFRSIGKLEGDNVTCSSAYGMYPGTLSEMILRQPPVTGKAWW 132 Query: 133 T-------SHNDLGIIRYMVAMGTA-HYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVV 184 + D + ++ + + +ID +D + A+ + + + Sbjct: 133 SISLRGTYGVPDRPAVIFVRQLPDGEGFWAVIDGQYLMDFM--------RALGESRNYHM 184 Query: 185 ITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVF 244 ++ A ++ P +++ ++ IS+ L K W + +F Sbjct: 185 TMRFNDGAPITSGPVEVQPEIWLKSEPLLA---QSSRYPISVEVVVPPSELLKAWRQALF 241 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 I+LP+ + +L + LRR S ++ A+ NR VHYQP+ S+A G EA Sbjct: 242 IFLPMAAIFSILLMILTANWLRRRISWRDEIRRAMRNRQFSVHYQPVYSVAEQHCNGVEA 301 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLES 364 L RW +G + PD FI A++ G+ PLT ++ + ED+ W P HI +NL + Sbjct: 302 LLRWHLPNGDTIRPDIFISAAEEEGMIVPLTRHLLELMAEDIQSWQVA-PGFHIGLNLAA 360 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 L + + Q QI LELTER D + A + + G + +DD Sbjct: 361 EHLQHPDFVKDIELFARRVQDKKLQITLELTERSLIHDGEDVARKLRLLQSQGMRVAIDD 420 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTG+ SLSYL +D LKID+ F++A+E V II +A+ L+L+++ EG+ET Sbjct: 421 FGTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPVLDAIINLARKLQLEVLGEGVET 480 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 S Q ++L+Q GV + QG+ Y+ + + W + Sbjct: 481 SLQFQYLQQRGVLFIQGYYYAWPMDNDRLRTWLNEQ 516 >UniRef50_A4XXL0 Diguanylate cyclase/phosphodiesterase n=26 Tax=cellular organisms RepID=A4XXL0_PSEMY Length = 711 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 93/256 (36%), Positives = 149/256 (58%), Gaps = 6/256 (2%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 +RR + L+DA+ + + YQP V + ++VG EAL RW +++PD FIPL Sbjct: 443 MRRRRELEKDLRDALALNQLHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVAPDLFIPL 502 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHY 383 A+Q G P+ I+ + +W Q ++INL + L ++P+++ +++ Y Sbjct: 503 AEQNGTIIPIGEWILDQTCRQLREWHDQGFTDLRMAINLSTVQLHHAELPRVVNNLMQVY 562 Query: 384 QVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 ++ PR + LE+TE D T+A + R +G I +DDFGTGYSSLSYL+ L +D + Sbjct: 563 RLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKI 622 Query: 443 KIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KIDKSFV L + + II++ K+L ++++AEG+ET +QE ++ G H GQG+L Sbjct: 623 KIDKSFVQDLLEDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAQGCHEGQGYL 682 Query: 499 YSKALPKEDFLRWAEQ 514 YSK LP + + +Q Sbjct: 683 YSKPLPARELTLFLKQ 698 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 8/245 (3%) Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 + L+ A++ ++ +HYQPIV + G+I G EAL RW D + P FIPLA++TG Sbjct: 560 NLEADLRAALDRGELLLHYQPIVDVQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETG 619 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQHPQ---QHISINLESPVLTSEKIPQLLRDMINHYQVN 386 L +PL +I + W + P+ +S+N+ E + + ++ ++ Sbjct: 620 LIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVSCHQFVKEGLVDHVAGVLETTGLD 679 Query: 387 PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKID 445 P + LE+TE D + +A +SR + G +I +DDFGTGYSSLSYL+ L +D LKID Sbjct: 680 PACLKLEITESVLMHDAQHTAGELSRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKID 739 Query: 446 KSFVD----ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 +SF+ E + + II +A++L L ++AEG+E Q + LR QG+++S+ Sbjct: 740 RSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSR 799 Query: 502 ALPKE 506 + K+ Sbjct: 800 PVDKD 804 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 141/296 (47%), Gaps = 17/296 (5%) Query: 226 IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 + A T M K + F + + LA + L A+ ++ Sbjct: 546 LRMNADTAMYRAKERGKNNFQFFTADMNASTLARL----------RLESNLHRALARQEF 595 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +H+QP V LA+G I G EAL RW + +SP FIP+A+++ L + ++ Sbjct: 596 QLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACR 655 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK 403 WL +++NL S +T I +R ++ H + + LE+TE D Sbjct: 656 QARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNT 715 Query: 404 -TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + + G I +DDFGTGYSSLSYL+ L +D+LKID+SFV L + + Sbjct: 716 GEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIA 775 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II M ++L L+ VAEG+E + ++L HG YGQG+L+S+ +P + + Sbjct: 776 SAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQLLLE 831 >UniRef50_Q0A9P4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9P4_ALHEH Length = 768 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 132/252 (52%), Gaps = 5/252 (1%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 + QS L+ A+E ++ ++YQ V LA+G++ GAE L RW + PD FIP A Sbjct: 512 QARQSLARDLEHALERGELLLNYQTKVDLASGRLAGAEVLLRWHHPVRGLVPPDQFIPEA 571 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQV 385 +++GL + ++ + WL Q +++NL S + ++ + + Sbjct: 572 EKSGLIVNIGQWVLETACRQGRRWLDQGRPVQLAVNLSSAQFRQADLVDQVKATLTRTGL 631 Query: 386 NPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 P + LE+TE D TS + RE G + +DDFGTGYSSL+YL+ V +LK+ Sbjct: 632 PPTLLELEITETAVMMDMDTSVRTLQALRELGVSLAIDDFGTGYSSLAYLRRFPVSVLKL 691 Query: 445 DKSFVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SFVD +E+ + ++++ + L L +VAEG+ET Q LRQ G QG+LY+ Sbjct: 692 DRSFVDGMEHGGDPAAIAAAVVQLGQVLSLSVVAEGVETEAQAAALRQLGCDLAQGYLYA 751 Query: 501 KALPKEDFLRWA 512 + P E F Sbjct: 752 RPQPAEQFEAQL 763 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 131/253 (51%), Gaps = 6/253 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 + L+ AIE + +HYQP + L K++G EAL RW +SP FIPLA Sbjct: 587 KNKLILEADLRKAIERNEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMVSPALFIPLA 646 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 ++TGL PL ++R+ W + P+ +++NL + L + I + ++ Sbjct: 647 EETGLICPLGEWVLRTACHQYRIWQKAGFPKIQMAVNLSAFQLQQDDIVARIAMILKETG 706 Query: 385 VNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 + P + LE+TE + + I+ + ++ G +I +DDFGTGYSSL+ L+ L VD LK Sbjct: 707 MTPSDLELEITETTVMENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLK 766 Query: 444 IDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 IDKSFV + + II + K +L ++AEG+ET Q E+LR QG+L Sbjct: 767 IDKSFVQDITLDSNDAKLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLI 826 Query: 500 SKALPKEDFLRWA 512 S+ L + + Sbjct: 827 SRPLAPDALIELL 839 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 19/295 (6%) Query: 226 IITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A + K R F + + L+A RRI L+DA+ Sbjct: 670 LLKNAEVALDRGKTEARGAFRFFEPAMDARLIA--------RRI--MERDLRDALAREAF 719 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 V+YQPI SL +I G EAL RW ++SP FIP+A++ GL PL ++R E Sbjct: 720 EVYYQPIYSLETDRICGFEALLRWNHPVRGFVSPAEFIPIAEELGLIVPLGEWVLRRACE 779 Query: 345 DMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPK 403 + W + +++N+ + TS + +R+ + + R++ LE+TE +P Sbjct: 780 EAARWPDE---LKVAVNVSAVQFTSASLVTAVREALRRTGLPGRRLELEITETVLVANPG 836 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTP 459 + I+ R G + +DDFGTGYSSLSYL+ D +KID+SFV L + Sbjct: 837 ATTAILHSLRALGVRVAMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRDLCVKDGTDFIVR 896 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +I + +L + AEG+ET Q LR G QG+L+S+ +P + + Sbjct: 897 AVIGLGASLGMTTTAEGVETEAQLAHLRAEGCDEVQGYLFSRPVPVSEVASVIRR 951 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 90/286 (31%), Positives = 149/286 (52%), Gaps = 6/286 (2%) Query: 235 LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSL 294 L +G H V+ G + + R + RL+ A+E + ++YQP + L Sbjct: 601 LLQGAHAAVYGAKARGSNAWCFFHENMTQAARERLALEARLRRALELGHMRLYYQPQIEL 660 Query: 295 ANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH- 353 A G++VGAEAL RW + +SP FIP+A+ +G+ PL L ++ W Sbjct: 661 ATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAAGL 720 Query: 354 PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRY 412 P I++N+ I + +N + LE+TE A+ P+ + +++R Sbjct: 721 PDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLNRL 780 Query: 413 REAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTL 468 RE G + +DDFGTGYSSL++L+ +D+LKID+ F+ + + ++ +I + + Sbjct: 781 RELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGHAM 840 Query: 469 KLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 LK++AEG+ET +Q +L+Q G Y QG+ S+ LP EDF R E+ Sbjct: 841 GLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTRLLEK 886 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 91/299 (30%), Positives = 140/299 (46%), Gaps = 19/299 (6%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A M Q K R + G+ + A + L+ A+ Sbjct: 1209 LLKQADLAMYQAKTAGRNTLRFFDPGMQAVVTA----------RAELENDLRTALAREQF 1258 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP + G + G EAL RWP +SP FIPLA++TGL PL ++ + Sbjct: 1259 MLHYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACA 1317 Query: 345 DMGDWLR--QHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 + W +++N+ S E + + I ++ LELTE F D Sbjct: 1318 QLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVED 1377 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 +T+ ++ R G LDDFGTGYSSLSYL+ + +D LKID+SFV L + Sbjct: 1378 METTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAI 1437 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 II ++++L L ++AEG+ET++Q L Q G QG+ +S+ LP+ + Q L Sbjct: 1438 VDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETALEDFLVQKL 1496 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 5/250 (2%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 L+ A+E + ++YQP SL + K+VG EAL RW L P SFIP+A++ Sbjct: 369 RLLLETELRVALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSFIPVAEE 428 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNP 387 TGL + ++R +W +S+NL E + Q + +I ++ Sbjct: 429 TGLIVRIGEWVLREACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQTMTKIIERTGMDS 488 Query: 388 RQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 + LE+TE D + + ++ + G + +DDFGTGYSS++YL+ V LKID+ Sbjct: 489 SLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFPVSRLKIDR 548 Query: 447 SFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKA 502 SF+ + +T I+MA +LKL++VAEG+ET Q ++LR+ G QG+L+S+ Sbjct: 549 SFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRP 608 Query: 503 LPKEDFLRWA 512 + + Sbjct: 609 VSAREMAELV 618 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 17/294 (5%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I A T M Q K R + + L + + L+ A+E + Sbjct: 360 LIMKADTAMYQAKDQGRSNYQFYTSALTLA----------ANDRLALETSLRHALEREEF 409 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP V + ++G EAL RW D +PD+FIP+A++TGL PL L ++R+ Sbjct: 410 TLHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVLRTACR 469 Query: 345 DMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK 403 W+R + H+++NL L + + ++ + + LELTE Sbjct: 470 QAQTWMRLYGEPIHMAVNLSMRQLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAGD 529 Query: 404 -TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 + ++ + G + +DDFGTGYSSL+YL+ L +D LKID+SFV + + + Sbjct: 530 GHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAIA 589 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 II MA+TL L++VAEG+ET +Q +L++ G QG+ +S + + W Sbjct: 590 STIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQGFGFSPPVDAQAMTLWL 643 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 89/256 (34%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 R+ L+ A+E ++ VHYQPIVSL GK++G EAL RW +SP FIP+A+ Sbjct: 1215 RLLELETNLRLALEREELIVHYQPIVSLTTGKLLGFEALVRWEHPKKGLISPGEFIPIAE 1274 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQH---PQQHISINLESPVLTSEKIPQLLRDMINHY 383 +TGL PL ++ M W ++ + +S+NL L + L ++ Sbjct: 1275 ETGLIIPLGEWVLLESCRQMKAWQKEFSGLDKIRVSVNLSGKQLEYPHLINCLESILKQT 1334 Query: 384 QVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 + + + LE+TE + + + ++ + + +I +DDFGTGYSSLSYL L VD L Sbjct: 1335 GLEGKNLKLEITESMLMNNKEVVSDLLLQIKGKNIQISIDDFGTGYSSLSYLHYLPVDTL 1394 Query: 443 KIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID+SFV+ + E + II +A L++ +VAEG+ET + + L+Q G GQG+ Sbjct: 1395 KIDRSFVNRMTQLGENFEIVEAIINLAHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYF 1454 Query: 499 YSKALPKEDFLRWAEQ 514 +SK L + W E+ Sbjct: 1455 FSKPLDSQKVTSWFEK 1470 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 17/326 (5%) Query: 196 ITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 I + ++ + I E +++ A M K R F + Sbjct: 544 IPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEM--- 600 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 R + L+ A+ + ++YQP V ++ GKIVG EAL RW Sbjct: 601 -------HREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLG 653 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 ++ PD FIPLA++ GL P+ ++++ W + P I++NL + ++ Sbjct: 654 FVPPDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLI 713 Query: 374 QLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ + +++P+ + LE+TE D + + + RE G I +DDFGTGYSSL+ Sbjct: 714 NIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLN 773 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 L+ ++ LKID+SFV + + I+ +++ LKLK+VAEG+ET +Q +LR Sbjct: 774 VLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRS 833 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQ 514 QG+ + +P + + Q Sbjct: 834 IHCDLAQGYYFCPPVPAIEIAKLLRQ 859 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 17/298 (5%) Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A + M K R F + L R + L+ A+ R+ Sbjct: 411 TLLKNADSAMHHAKAEGRNNFQFYTSSGKTAAL----------RSLTLEGDLRMALARRE 460 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + V YQP + L G+ VG E L RW + P FIPLA++TGL P+ I+ Sbjct: 461 LFVEYQPEIDLKTGETVGLETLVRWDHPTLGLIPPLDFIPLAEETGLILPIGEWILSIAC 520 Query: 344 EDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 W + +++NL + + + + + +++P+ + LE+TE + Sbjct: 521 MQNAIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTNSRLDPQHLELEITESTLMEN 580 Query: 403 KT-SAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + + + G + +DDFGTGYSSLSYL+ +D+LKID+SF+ + + + Sbjct: 581 AASTIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDVLKIDRSFIRDVTINADDAAI 640 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 T II MA L L+++AEG+E +Q ++L+++ QG+ Y + L + E+ Sbjct: 641 TRAIIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGYYYCRPLTPAKLTKHLEKQ 698 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 95/387 (24%), Positives = 174/387 (44%), Gaps = 28/387 (7%) Query: 144 MVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII--TRLQK 201 ++G ++ + A + G+ +++ D + I ++ + Sbjct: 556 NDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIE 615 Query: 202 TPGEHIENNGIIYDILPL---------PEMNISIITWASTKMLQ-KGWHRQVFIWLPLGL 251 + E I P E ++ ++ A M Q K R F + + Sbjct: 616 SLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPDM 675 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 + L R++ L+ AI + + V+YQP VS+ +GK+ G EAL RW Sbjct: 676 N---------RKALERLK-LETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHP 725 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSE 370 + ++SP FIP+A++TGL + ++R W Q I++NL + L + Sbjct: 726 ELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQD 785 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYS 429 + ++ ++ + LE+TE ++ I+ + R+ G + LDDFGTGYS Sbjct: 786 NFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYS 845 Query: 430 SLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SLS L++L +D LKID+SFV + ++ +A L LK+ AEG+ET +Q ++ Sbjct: 846 SLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDF 905 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWA 512 +R QG+L+S+ +P + +++ Sbjct: 906 IRMLNCEEYQGYLFSRPIPASEVVKYF 932 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 150/296 (50%), Gaps = 17/296 (5%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++I A M K R F + + R ++L A+ + Sbjct: 361 TLIKNADAAMYDAKQRGRNSFQFYTKDINSQTY----------RQLILENQLVKALAREE 410 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 VHYQP V + +G++VGAEAL RW + P +FI +A++TG+ E L +++ V Sbjct: 411 FEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIAIAEETGIIEGLGAWVLQKVC 470 Query: 344 EDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 +D+ R + ISINL + + + R+ I + P I LELTE D Sbjct: 471 QDIRQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTIRSAGIAPAYIELELTESTIMKD 530 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + ++ + G + +DDFGTGYSSL+ L+ +D LKIDKSFV + + + + Sbjct: 531 IDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDTLKIDKSFVRDIPGDRDDEAI 590 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 I+ +AK+L+L++VAEG+ET +Q +L++ G QG+ +S+ LP E F + + Sbjct: 591 VTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYFFSRPLPFEGFREYLK 646 >UniRef50_B1Y5R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Burkholderiales RepID=B1Y5R0_LEPCP Length = 863 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 144/268 (53%), Gaps = 7/268 (2%) Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 V+ + +R R+ S L+ A++ ++ +HYQP V L +G+IVG EAL RW Sbjct: 575 VLRFFSPELTIRARERL-SLEADLRRALQQGELALHYQPQVDLRSGRIVGVEALLRWRHP 633 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSE 370 W++P +FIPLA++ GL L ++R+ E + W + ++N+ + ++S Sbjct: 634 QRGWIAPGAFIPLAEECGLIIELGDWVLRAACEQIRHWSDAGVAPRQTAVNISAVQISSG 693 Query: 371 KIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYS 429 + +R + + P ++ LE+TE + + S +++ R G ++ +DDFGTGYS Sbjct: 694 GLLDTVRRTLAATGIAPDRLELEITESFVMFERERSFKLLADLRALGVQLSIDDFGTGYS 753 Query: 430 SLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL+YLQ L+V LKID SFV + ++ +I M +L L+++AEG+E +Q Sbjct: 754 SLAYLQQLEVHKLKIDISFVRNMTRNRGNASIVKAVIAMGHSLGLEVIAEGVEEIEQAAH 813 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAE 513 L QG+L SK LP +D R E Sbjct: 814 LLALQCDVMQGYLVSKPLPVDDITRLLE 841 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 17/290 (5%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A T M K + F + + R L R++ L+ A+E + Sbjct: 1121 LMKNADTAMYHAKEMGKNNFQFYQAEMNA---------RALERLE-LESDLRRALELGEF 1170 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP + ++ GAEAL RW + P FIP+ ++ GL + ++ + Sbjct: 1171 VLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACK 1230 Query: 345 DMGDWLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 + W + + +S+NL + ++ + + ++ + P + LELTE D Sbjct: 1231 QLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDV 1290 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY----KNVT 458 + I+S + G I +DDFGTGYSSL+YL+ +D+LKID+SFVD L + + Sbjct: 1291 AEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIA 1350 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 II MA +L L ++AEG+E+ Q ++LR+HG QG+L+ + +P E F Sbjct: 1351 RAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF 1400 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 120/512 (23%), Positives = 236/512 (46%), Gaps = 24/512 (4%) Query: 13 VLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGA 72 + +L+ + + +W + Q + + + R ++ + K+A+++ + Sbjct: 5 IALLTFVAMFAMGLWAIYYQDYRADRQGAYANAERAVKNIEEILDEAKNAVEDSKPLLAL 64 Query: 73 ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWL 132 +C+ + ++ + +++ V+ I +V CSSL E + + Sbjct: 65 SCTPEVIRQLNMTAAVASHLRTVSLIKRDVVYCSSLYGVDNRPAALERFHMRELALLAGN 124 Query: 133 TSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIA 192 + D +I Y+ V I V+ S + + ++ + Sbjct: 125 SVTPDRTLIMYLGNTAYGSVGVAIHGQHLTSVLDLLSKRRNLYLLVGNTWI--------- 175 Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKM-LQKGWHRQVFIWLPLGL 251 + + + I+P + SI+ + K L W+++ +L + Sbjct: 176 -----SRENQVSTFNPTDLPNFVIIPSGHYHFSILYSLNEKYSLADFWYKEKMTFLIV-F 229 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 +I L + + RI SP+ ++ AIEN+++ +YQP++S + +I G E LARW Sbjct: 230 LIALGSGFLAYKYSTRINSPYDGIRRAIENQEVLPYYQPVISTVSREIYGVEVLARWHHP 289 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSE 370 ++SPD FIPL +Q+GL P+T ++ SV D+ L P HI+IN+ + S+ Sbjct: 290 KSGFISPDIFIPLCEQSGLIIPMTRSLMSSVVRDLTPHLNTLPDNLHIAINISAQHCQSD 349 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYS 429 ++ I + + +E+TERE D + + +AG I LDDFGTGYS Sbjct: 350 DFITDCQNFIAAFGDKNVHLMIEITEREKVDITPETIGFFKKLSDAGVLIALDDFGTGYS 409 Query: 430 SLSYLQDLDVDILKIDKSFVDALEYKN-----VTPHIIEMAKTLKLKMVAEGIETSKQEE 484 + YL+ L V+++KID+SFV ++ + + +I++A+ +KL +AEG+ET Q E Sbjct: 410 NFDYLRKLHVNVIKIDQSFVSMIDENDPQSSTLVNCVIDLAQQMKLMTIAEGVETEFQTE 469 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLR-WAEQH 515 +L + +++ QG+ +S+ LP ++ + W + Sbjct: 470 FLSRKHINFMQGYFFSRPLPFDELAQTWLNKR 501 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 17/297 (5%) Query: 225 SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +++ A T M K R + L A + ++ +E + Sbjct: 677 TLLKHADTAMYYAKEQGRNNWQLYDRTLTTRTTAR----------LALEGDIRKGLERGE 726 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 + YQP VS +G IVG EAL RW +SP FIP+A+++GL P+ ++ + Sbjct: 727 FRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAAC 786 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 + W + P +++N+ + L + + +I + ++ LELTE DP Sbjct: 787 RQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDP 846 Query: 403 K-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----V 457 + +SR R G +DDFGTGYSSLSY++ + LKID+SFV L + Sbjct: 847 EAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAGI 906 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 T II MA++L L++VAEG+ET +Q +L++ QG+L+S LP ++ + Sbjct: 907 TTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDEMEAILRR 963 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 18/328 (5%) Query: 194 GIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGL 251 + E + I + P ++IS ++ A M K + F + Sbjct: 726 ALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHFY---- 781 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 +A + R+ + + L+ A+E + + YQ + LA I+GAEAL RW Sbjct: 782 -----SADGNANSVSRL-TLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSA 835 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSE 370 + +SP FIP+A++TG+ + +++ D W + +N+ + + Sbjct: 836 ELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFRED 895 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYS 429 + Q + + + + P + LE+TE + + ++ ++ +R G + +DDFGTGYS Sbjct: 896 SLYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYS 955 Query: 430 SLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL YL+ +D LKID+SFV + + +T II MA +LK+ +VAEG+ET Q E+ Sbjct: 956 SLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEF 1015 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAE 513 LR G QG+++S+ L EDF+ Sbjct: 1016 LRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 6/253 (2%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 + L+ IE + ++YQP V+LA G++ EAL RW + L P FIP A++ Sbjct: 436 RIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIPRAEE 495 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVN 386 TGL PL I+ + W + + +++NL + ++ + + + D + + Sbjct: 496 TGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDALESSGLP 555 Query: 387 PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKID 445 P + LE+TE DP+ + +S R+ G + +DDFGTGYSS SYL+ +D LKID Sbjct: 556 PECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDRLKID 615 Query: 446 KSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 +SF+ + + II + L LK++AEG+E+ Q E L+ QG+ S+ Sbjct: 616 RSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGFFNSR 675 Query: 502 ALPKEDFLRWAEQ 514 LP + ++ Sbjct: 676 PLPPGELAERLKE 688 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 91/302 (30%), Positives = 148/302 (49%), Gaps = 15/302 (4%) Query: 218 PLPEMNISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 + ++ A+T + K R ++ + L R R L+ Sbjct: 451 LDADDAAQLLQHANTALAEAKAQGRGIYSFYTQALT----------RSARVRMEMEADLR 500 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 + + +++QP+V LANG+I GAEAL RW + P+ FIPLA++TGL EPL Sbjct: 501 RGLVREEFRLNFQPVVDLANGRIAGAEALVRWQSPVHGLVLPNRFIPLAEETGLIEPLGD 560 Query: 337 LIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 ++ + M W I++NL + + + +++ + ++ +E+T Sbjct: 561 WVLEEACQQMAKWTAAGADLDFIAVNLSPRQFQRGTLCERIEEVLRRTGLPAARLEVEIT 620 Query: 396 EREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE-- 453 E + + R++G I LDDFGTGYSSL+YL+ + LKID+SFV L Sbjct: 621 ENVLFGAVAAERKLRDMRDSGVRIALDDFGTGYSSLAYLKRFPISKLKIDRSFVHDLPRA 680 Query: 454 -YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + II +A+ L L +VAEGIE +Q +L++ G +GQG+L+ + + E FLR A Sbjct: 681 ADAEIATAIISIARALGLDVVAEGIEAPEQCAFLKERGCGFGQGYLFGRPVTSERFLRLA 740 Query: 513 EQ 514 Q Sbjct: 741 LQ 742 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 85/252 (33%), Positives = 129/252 (51%), Gaps = 6/252 (2%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 R + ++ +EN + V YQP V + G++ G EAL RW + DG+ + P FIP+A+ Sbjct: 468 RRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAE 527 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVN 386 TGL L ++R W + I++N+ + + ++ + + Sbjct: 528 DTGLVVALGERVLRDACIQTRRWTDELGPLRIAVNISARQF-QPDLLDRVQAALAESGLP 586 Query: 387 PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKID 445 P Q+ LE+TE D TS I+ R G I +DDFGTG+SSL YL++ +D +KID Sbjct: 587 PSQLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKID 646 Query: 446 KSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 +SFV + + I+ M + L L +VAEG+ET Q +LR HG QG+ YSK Sbjct: 647 RSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSK 706 Query: 502 ALPKEDFLRWAE 513 LP + F W Sbjct: 707 PLPADGFADWMR 718 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 93/307 (30%), Positives = 143/307 (46%), Gaps = 17/307 (5%) Query: 213 IYDILPLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 I E +++ A +L K R F + + R S Sbjct: 547 ISVFPKNGENGEAMLRSADAALLRAKQSGRNTFSFYSPEMDAD----------AARRLSI 596 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 L+DA+ + CVHYQP VSL +G ++G EAL RW +SP FIP+A++TGL Sbjct: 597 ESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLI 656 Query: 332 EPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 + ++R+ WL H+++NL +P + + + + Sbjct: 657 MQIGDWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGAL 716 Query: 391 ALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LE+TE F D + + S+ + G ++ LDDFGTGYSSL+Y+ D +KID+SFV Sbjct: 717 ELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFV 776 Query: 450 DALEYKNVTPHI----IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 + V I I M ++L L ++AEG+ET Q +LR QG+L+S+ LP Sbjct: 777 RDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPP 836 Query: 506 EDFLRWA 512 E+F Sbjct: 837 EEFAPLL 843 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 87/295 (29%), Positives = 147/295 (49%), Gaps = 18/295 (6%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A M Q K R + + + + + + L++A+E Sbjct: 629 LLKQADLAMYQAKDSGRNAIRFFDPEMQAAITSRV----------ALEADLREAVEAGQF 678 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 ++YQP V + ++ GAEAL RW + + P FIPLA++TGL PL ++ + Sbjct: 679 QLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACA 738 Query: 345 DMGDWLRQH--PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 + W Q Q +++N+ + + + ++ NP+++ LELTE + Sbjct: 739 QLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSN 798 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNV 457 + ++ + G LDDFGTGYSSLSYL+ L +D LKID+SFV+ + + Sbjct: 799 VEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAI 858 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 I+ +A++L L ++AEG+ET +Q +L + G H QG+L+SK LP F +W Sbjct: 859 AKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQWI 913 >UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7J2_BACCO Length = 559 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 98/362 (27%), Positives = 161/362 (44%), Gaps = 17/362 (4%) Query: 158 PASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDIL 217 P S +V + G + V +++I + ++ + + Sbjct: 206 PFSDYEVYRQGGDEFIVLTAGCSREEVKQMAEQILALFYDPFKIEGEDYFLTPSVGISLF 265 Query: 218 P-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRL 275 P E ++I A T + + K + F++ + + L Sbjct: 266 PEDGEDGETLIKHADTALFKVKERGKGHFLFYSKKMDADFHNYIL----------MEAHL 315 Query: 276 QDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLT 335 + AIE ++ VHYQP V L GKI EAL RW + P FIPLA++TGL + Sbjct: 316 RRAIEKNELAVHYQPQVQLDTGKIKSFEALLRWRNPKFGNVPPLKFIPLAEETGLITSIG 375 Query: 336 LLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 +I V + W ++ +++N+ + L+ + Y++ + +E+ Sbjct: 376 AWVIDHVCAQIAQWRQKGWAGFRVAVNISPKQFLDPGLAGLIGRTLEKYKLPASVLEIEI 435 Query: 395 TEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY 454 TE D ++S +E G I +DDFGTGYSSL+YL+ VDILKID+SFV LE Sbjct: 436 TEGAMEDKGHILKVLSSLKEMGLTISVDDFGTGYSSLNYLKKFPVDILKIDQSFVRELEN 495 Query: 455 K----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 +T II +A L L++VAEG+E Q E+L+ QG+ +S+ +P E+ + Sbjct: 496 SQKDAAITKTIIHLAHQLGLEVVAEGVEEQGQVEFLQSARCQKAQGYFFSRPVPAEEVEK 555 Query: 511 WA 512 Sbjct: 556 QL 557 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 94/359 (26%), Positives = 165/359 (45%), Gaps = 9/359 (2%) Query: 166 PYSSWQIDAAIIGNAHNVVITSSDEIAQGII--TRLQKTPGEHIENNGIIYDILPLPEMN 223 A + G+ V++ +++ ++ R+Q++ NG I + Sbjct: 374 CVRESDTLARLGGDEFTVLLEGIKDLSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVA 433 Query: 224 ISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +S + + + L ++ LG + + L+ AIE ++ Sbjct: 434 LSTMGYDDPEQLLHNADAAMYRAKALGKAQWEVFTADMHSNASAQLQLEVDLRRAIERQE 493 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 +HYQPI L IVG EAL RW +SP FIP+A++TGL P++ +++ Sbjct: 494 FQLHYQPIFHLETAAIVGFEALLRWHHPLRGLISPVEFIPVAEETGLILPISWWVLQEAC 553 Query: 344 EDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA 400 + W Q P +S+N S + + + D+++ + P+ + LE+TE Sbjct: 554 RQLSRWQTQFPLEVPLFVSVNFSSKQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIM 613 Query: 401 DP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN--- 456 + + +A + + G ++ +DDFGTGYSSLSYL VDILK+D+SFV A++ Sbjct: 614 ENAEATAAKLLEIKALGIQLGIDDFGTGYSSLSYLHRFPVDILKVDRSFVSAMDSHENLQ 673 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + I +++ L ++ VAEG+ET++Q LR Y QG+ +SK + H Sbjct: 674 IVHTITMLSQNLGMRAVAEGVETAEQAAQLRAMNCQYAQGYFFSKPIDASSMEHLLAHH 732 >UniRef50_A0YP68 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=2 Tax=Oscillatoriales RepID=A0YP68_9CYAN Length = 575 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 140/251 (55%), Gaps = 6/251 (2%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 + L+ A+E+ ++YQP V L G+I+GAEAL RW ++ ++SP FIPLA++ GL Sbjct: 320 LENDLRQALEHNQFQLYYQPKVDLKTGQIIGAEALIRWIESKRGFVSPAVFIPLAEEIGL 379 Query: 331 SEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 EP+ ++R+ W + + +++NL I ++ + + + Sbjct: 380 IEPIGEWVLRTACRQTKTWHKLGLETLKMAVNLSGCQFNLPDICPMVLETLLAEDLPSSC 439 Query: 390 IALELTEREFADPKTS-APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LELTE + + + ++R + G +I +DDFGTGYSSLSYLQ D+LK+D+ F Sbjct: 440 LELELTESFLVEHEDASIQKLNRLKALGLKIAIDDFGTGYSSLSYLQQFPFDVLKLDRCF 499 Query: 449 VDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V ++ + +I+MA L L++VAEG+ET+ + LRQ+ QG+L+S+ +P Sbjct: 500 VQNIDQNPKNKIIVEAVIKMAHQLNLEVVAEGVETTAELHVLRQYQCDIIQGYLFSRPIP 559 Query: 505 KEDFLRWAEQH 515 ++F E + Sbjct: 560 AQEFQALVESN 570 >UniRef50_A0PXI0 Nitrogen fixation positive activator, putative n=2 Tax=Clostridium RepID=A0PXI0_CLONN Length = 591 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 84/254 (33%), Positives = 135/254 (53%), Gaps = 5/254 (1%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 + L+ A+EN +HYQP VSL +G ++G EAL RW + PD FIPLA+ Sbjct: 330 KRIEMIALLKHAVENNQFVLHYQPQVSLESGSVMGVEALIRWNHPKLGLVYPDKFIPLAE 389 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQV 385 +TGL P+ +IR W + +S+NL + E + ++ D + + Sbjct: 390 KTGLIIPMGEWVIREACRQNKIWHDSGFEELVVSVNLSALQFEKEDLVDVIVDALKTSGL 449 Query: 386 NPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 +P+ + +E+TE + + ++ +E G +I +DDFGTGYSSLSYL++ +D LKI Sbjct: 450 DPKFLEVEITEGILMVNTDKAIQTLNDLKEIGVKIAIDDFGTGYSSLSYLKEFPIDRLKI 509 Query: 445 DKSFVDAL---EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 D+SF+ + + + IIE+AK+L L +VAEG ET ++L+ QG+ +SK Sbjct: 510 DRSFIMGIPKEDNGAIANIIIELAKSLHLNVVAEGTETLDHIKFLKVRKCDTIQGYYFSK 569 Query: 502 ALPKEDFLRWAEQH 515 + E F + Sbjct: 570 PVSGEGFTEILRDN 583 >UniRef50_B1XJQ6 Two-component response regulator; GGDEF domain protein n=3 Tax=Cyanobacteria RepID=B1XJQ6_SYNP2 Length = 602 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 92/249 (36%), Positives = 134/249 (53%), Gaps = 6/249 (2%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 L DAI+N + ++YQP +S GKIVGAEAL RW +SP FIPLA++ GL Sbjct: 338 LDADLYDAIQNNQLTLYYQPKISTTTGKIVGAEALIRWFHPTLGMVSPAKFIPLAEKNGL 397 Query: 331 SEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 + + R+ W+++ I++NL ++ + L ++ Y +NP Q Sbjct: 398 IASIGEWVFRAACHQAQQWMQRGMSDLRIAVNLSGRQFYQAQLVENLVEITQQYGINPAQ 457 Query: 390 IALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 I LE+TE D + + + + +G I +DDFGTGYSSLSYLQ+ DILKID+ F Sbjct: 458 IELEVTESILISDVELAIAHLQALKNSGFPIAIDDFGTGYSSLSYLQNFPFDILKIDRCF 517 Query: 449 VD----ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + + HII MAK L+L VAEG+ET + E+L+ QG+L+S +P Sbjct: 518 VRNVAHNITNSTIVKHIIMMAKQLELTTVAEGVETMAELEFLKTQHCDEIQGFLFSPPVP 577 Query: 505 KEDFLRWAE 513 E F + Sbjct: 578 AEKFTAMLQ 586 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 92/249 (36%), Positives = 142/249 (57%), Gaps = 8/249 (3%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 ++ + L+ AIEN++ V+YQPI++L KIVG EAL RW ++SP FIP+A+ Sbjct: 338 KLLNLETDLRRAIENQEFLVYYQPIMALEKTKIVGFEALIRWQHPKKGFISPGEFIPIAE 397 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHY 383 +TGL P+ ++++ + + W + P IS+NL S L +I Q + +N Sbjct: 398 ETGLIIPIGQIVLKEACQQLKTWQEKLPKAKNLTISVNLSSQQLKEPEILQHIDHSLNVT 457 Query: 384 QVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 + P + LE+TE + + ++ + +E +I LDDFGTGYSSLSYL VD L Sbjct: 458 GLQPESLKLEITESLLMENADVATTLLRQLKERKIQISLDDFGTGYSSLSYLHRFPVDTL 517 Query: 443 KIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID+SFV+ + E + I+ +A L + +VAEGIET KQ +L+ +GQG+ Sbjct: 518 KIDRSFVNCIGKPEENLTIIQSIMALAHNLDMDVVAEGIETEKQLTFLKFLECEFGQGYF 577 Query: 499 YSKALPKED 507 +SK LP + Sbjct: 578 FSKPLPSHE 586 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 89/335 (26%), Positives = 149/335 (44%), Gaps = 21/335 (6%) Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQV 243 T +++I + Q H + I + P + I ++ A M K R Sbjct: 500 TVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNA 559 Query: 244 FIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAE 303 + + I + L A+ + +HYQ + ++ GAE Sbjct: 560 VRFFDPSMEIAVKV----------RAEMEDDLLRALAEKQFLLHYQAQ--MVGERLTGAE 607 Query: 304 ALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW--LRQHPQQHISIN 361 L RW +SP FIPLA++TGL PL ++ + + W + +++N Sbjct: 608 VLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVN 667 Query: 362 LESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIY 420 + + + ++ NP+++ LELTE + + ++ + G Sbjct: 668 VSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFS 727 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEG 476 LDDFGTGYSSLSYL+ L +D LKID+SFV + ++ I+ +A +L L ++AEG Sbjct: 728 LDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEG 787 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 +ET Q ++L G H QG+ +S+ LP EDF + Sbjct: 788 VETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 105/501 (20%), Positives = 192/501 (38%), Gaps = 46/501 (9%) Query: 49 AIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS--YS---YRYIQEVAYIDNNVP 103 A R + T + L C H+ + + + + YI Sbjct: 201 AERPPAMMTVTRSLLFMAMGHVLLTCPPGHVEGLTQAAGQWYMGISYYIVLKGVYRL--- 257 Query: 104 QCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAM----GTAHYVVMIDPA 159 ++E E + N + + + V +I+ Sbjct: 258 ---TIEEPLRGKLLVEAQMKHMAYHDDLTGLPNLRQMKEQLDELLGFTRACIGVAVINID 314 Query: 160 SFIDVIPYSSWQ----------IDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIEN 209 F + + A++ V ++ + + L Sbjct: 315 RFKAINDSLGYSAGDKVLTELGSRLAVLEGPQQWVYRMGEDEFAVVFSELPDAAAAEDRA 374 Query: 210 NGIIYDILP-----LPEMNISIITWASTKMLQKGWHRQVFIWLPLGL-------VIGLLA 257 ++ + P E +IS+ S ++ + + + V L Sbjct: 375 KQLLASVDPGVLIDDTEYHISLSMGLSVFPNDADSVNELIQFADMAVHHAKEQGVEFLRY 434 Query: 258 AMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLS 317 + + + + ++ A+E + + +QP + L GK+VG EAL RW + Sbjct: 435 HAAMKQRTQAKVELENDMRKALEREEFFLEFQPQIRLDTGKMVGMEALVRWNHPKRGLIP 494 Query: 318 PDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLL 376 P FIPLA+++GL PL ++++ + W +S+NL + + + Sbjct: 495 PSEFIPLAEESGLIVPLGEWVLKTACQYNKKWQMDGFEPVCVSVNLSMRQFRQYNLAEHV 554 Query: 377 RDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 ++ ++P+ + LE+TE D +T+ + R + G I +DDFGTGYSSL YL+ Sbjct: 555 NAILREVGLDPQYLELEVTESMTYDIETALDQLHRLKRLGIHISIDDFGTGYSSLYYLKS 614 Query: 437 LDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 L +D LKID++FV + + I MA LKLK+ AEG+E +Q E+L++ H Sbjct: 615 LPIDRLKIDRAFVKEVMYDGNDAAIVSTITTMAHHLKLKVTAEGVENEEQLEFLKRQRCH 674 Query: 493 YGQGWLYSKALPK----EDFL 509 GQG+L+SK + +FL Sbjct: 675 EGQGYLFSKPVSAGVLESEFL 695 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 19/297 (6%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A M Q K R + + L A + + L+ AIE Sbjct: 725 LLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARL----------ALELELRKAIEKDQF 774 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 ++YQ V + +GAEAL RW + ++P FIP+A++TGL P+ ++ + Sbjct: 775 QLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACT 833 Query: 345 DMGDWLRQH--PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 + W + +SIN+ + ++ ++HY ++P + LELTE + Sbjct: 834 QLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLEN 893 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----V 457 T+ +S ++ G LDDFGTGYSSL YL+ L +D LKID+SF+ + + + Sbjct: 894 VDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAI 953 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II MA+++++ ++AEG+ET +Q + L + G ++ QG+L+SK +P E F + + Sbjct: 954 VSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLLHR 1010 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 16/296 (5%) Query: 226 IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I A M K + + + L + R + L+ I + Sbjct: 528 LIKNADIAMYRAKADGKNGYQFFTNELNESV----------SRRSNLSMALRKGIGRGEF 577 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 VHYQP + L ++G EAL RW + +SP FIP+A++TG L ++ Sbjct: 578 TVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGEFVLNEACR 637 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK 403 W P +++N+ + + +P+++ + + + + LELTE Sbjct: 638 QNKAWQDASIPPFRVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELELTESVIQSAD 697 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTP 459 + + G + +DDFGTGYSSLSYL+ +D LKID+ F +E + Sbjct: 698 RAIETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAALVK 757 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II MA L L ++AEG+ET Q +L+ + QG+ Y++ LP E+ + +Q+ Sbjct: 758 TIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEEIEVFFQQY 813 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 84/248 (33%), Positives = 133/248 (53%), Gaps = 7/248 (2%) Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 + L+ A+E ++ + YQPIV +G + AEAL RW + L+PD FIPLA + Sbjct: 324 RLTLEAELRHAVERGELRLFYQPIVD-PDGTVRAAEALVRWQHPEQGLLAPDRFIPLADE 382 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVN 386 TGL + ++ W + +S+N+ + ++ + +R+ + Sbjct: 383 TGLITEIGAWVLTEACYQGRCWHDAGHERFRVSVNVSAVQFGQPRLLETVREALRGSGFP 442 Query: 387 PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKID 445 P + LE+TE D +++A ++ + G I +DDFGTGYSSLSYL+ L +D +KID Sbjct: 443 PACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLRRLPIDTVKID 502 Query: 446 KSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 KSFV + E + II +A +L L VAEG+ET++QE LR+ G QG+ Y + Sbjct: 503 KSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGCDSFQGYRYGR 562 Query: 502 ALPKEDFL 509 +P E F+ Sbjct: 563 PVPAEVFV 570 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 18/327 (5%) Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 + + I + P + +++ A M K R + + L Sbjct: 303 NPFDLVVAKVFASASIGIALFPQNGRDAETLLKHADMAMYEAKNVGRNTYRFFSDEL--- 359 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 R + R L+ A+ ++ + YQP V L G+IV EAL RW + Sbjct: 360 ------HRRTIER-HKLEVGLRRAVRKKEFFLVYQPQVDLGTGRIVALEALVRWQHPEAG 412 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 L P +FIP+A++TGL + I+R+ W R P I++N + + Sbjct: 413 VLLPSTFIPVAEETGLIHIMGEWILRTACHQAMQWQRMGLPPMRIAVNFSARQFRQPDLV 472 Query: 374 QLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + + ++ + P + LE+TE F + +++ + + +I +DDFGTGYSSL+ Sbjct: 473 ERIEQILLESGLPPHHLELEITESVFMENLESAIETLVDLKTRAIQIAIDDFGTGYSSLN 532 Query: 433 YLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL++ +D LKI + FV + + I+ MA L +K++AEG+ET +Q +LR+ Sbjct: 533 YLKNFPLDRLKIAQDFVRDIPDDEDDATIIETIMAMANRLGIKVLAEGVETMEQVTFLRR 592 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 G H QG+ +++ + E+ + Q Sbjct: 593 KGCHEMQGFYFARPMQAEEIAGFLNQR 619 >UniRef50_A3YDR3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with GAF sensor n=1 Tax=Marinomonas sp. MED121 RepID=A3YDR3_9GAMM Length = 531 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 83/250 (33%), Positives = 145/250 (58%), Gaps = 6/250 (2%) Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 + L+ AIEN + ++YQP V+ ++ +++GAE L RW ++ +++PD FI +A+++G Sbjct: 269 TLGADLRQAIENYNFELYYQPKVNASDFRVMGAEVLIRWKHSELGFITPDRFISIAEESG 328 Query: 330 LSEPLTLLIIRSVFEDMGDW-LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 L PL IIR + + +W H +SINL L + ++ ++ ++P+ Sbjct: 329 LIIPLGEWIIRETCKQLMEWDKDNHHDLIVSINLSMKQLAHKDFIDMVMGILCETHIDPK 388 Query: 389 QIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKS 447 ++ E+TE D + ++R ++ G I +DDFGTGYSSLSYL+ L + +KIDKS Sbjct: 389 RLEFEITETVLMCDVNEVSEKVNRLKDIGINISIDDFGTGYSSLSYLKKLPIQTIKIDKS 448 Query: 448 FVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 F+ + + K + I MA +L + ++AEG+E +Q LR G Y QG+ +SK + Sbjct: 449 FIRDICSDDDDKAIVKATINMALSLNIDIIAEGVENIEQVNILRNFGCQYFQGYYFSKPI 508 Query: 504 PKEDFLRWAE 513 K++F+++ E Sbjct: 509 DKQNFIKYCE 518 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 19/368 (5%) Query: 155 MIDPASFIDVIPY-SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGII 213 + D D + + + +++I + E + I Sbjct: 322 LRDSVRLSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEVFAAPFDLDDRELTISPSIG 381 Query: 214 YDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 P + +++ A M Q K R F + + +L ++ Sbjct: 382 IARYPDDGKDFPALLQSADIAMYQAKREGRNGFRMFSIEMNAPILESLL----------L 431 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 +L+ A+++ + + YQP+V +A+G+IVGAEAL RW +SP FIP+A+++GL Sbjct: 432 ETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQHGEISPVRFIPVAEESGLI 491 Query: 332 EPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 P+ ++ + W HP +++NL + I + +++HY + + Sbjct: 492 LPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSALQFERLNISNTVLRLLDHYGLPGSAL 551 Query: 391 ALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LELTE D + + + + G + +DDFGTGYSSL+YL L + LKID+SFV Sbjct: 552 ELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSLAYLTRLPLAKLKIDRSFV 611 Query: 450 DALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 + +V I+++A++L L+++AEG+E Q LR+ QG+LYS+ +P Sbjct: 612 RNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLREWCCDQAQGYLYSRPVPA 671 Query: 506 EDFLRWAE 513 F Sbjct: 672 RAFEALLR 679 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 87/257 (33%), Positives = 138/257 (53%), Gaps = 7/257 (2%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 L R+Q ++L+ AIE + V YQP ++LA+ ++ AEAL RW ++P FI L Sbjct: 699 LERLQ-LENQLRKAIEEGQLEVFYQPKLNLADDQLNAAEALVRWRHPQQGLVAPGEFIGL 757 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHY 383 A++TGL P+ ++R W +Q + +S+N+ L + L+R ++ Sbjct: 758 AEETGLIAPIGEFVLRQACRQARQWQQQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEET 817 Query: 384 QVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 + P+ + LELTE + D + + RE G ++ +DDFGTGYSSLSYL+ V + Sbjct: 818 GLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYV 877 Query: 443 KIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID++F+ L E +T II MA +L+LK+VAEG+ET Q ++L+ QG+L Sbjct: 878 KIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYL 937 Query: 499 YSKALPKEDFLRWAEQH 515 S+ + F Sbjct: 938 ISRPVEAAAFAELLRAQ 954 >UniRef50_Q1JZ56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ56_DESAC Length = 928 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 84/245 (34%), Positives = 139/245 (56%), Gaps = 6/245 (2%) Query: 276 QDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLT 335 + AI ++ V+YQP V + KIVG EAL RW +D +SP FIPLA+QTGL + Sbjct: 682 RQAIVKNELHVYYQPKVDAGSEKIVGFEALLRWVHSDRGMISPGVFIPLAEQTGLIHEIG 741 Query: 336 LLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 L +I V + W Q + +++NL + S + + + +++ Y ++ EL Sbjct: 742 LWVIEDVCRQLRQWADQDYAIVPVAVNLSAKQFQSVDLAKQVATILDSYHIDSSWFEFEL 801 Query: 395 TEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD--- 450 TE +P +S I+ ++ G + +DDFGTGYSSL+YL+ L +D LKID+SF+D Sbjct: 802 TESMIMQNPLSSIRIMKELKDLGLRLAVDDFGTGYSSLNYLRRLPLDYLKIDRSFIDDVT 861 Query: 451 -ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 L V II +A++L ++ +AEG+ET++Q +L+ + + QG+ + + +P +D Sbjct: 862 QDLSADAVATSIIGIARSLGMQTIAEGVETAEQLMFLKDNNCDFIQGFYFYRPMPVDDAT 921 Query: 510 RWAEQ 514 E+ Sbjct: 922 SLLER 926 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 101/361 (27%), Positives = 172/361 (47%), Gaps = 19/361 (5%) Query: 163 DVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP 220 DV+ A I+ + H V+ + ++ + + + E + I + P Sbjct: 672 DVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRD 731 Query: 221 EMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 ++ ++ A + K + F + L + + + L+ A Sbjct: 732 GGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRI----------ALEQGLRYA 781 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 E +++ +HYQP V +A+GK+ G EAL RW D +SP FIPLA+QT L P+ + Sbjct: 782 KERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWV 841 Query: 339 IRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 +R+ W Q ++++NL + L S + + + +I+ + P + LELTE Sbjct: 842 LRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESA 901 Query: 399 FA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----E 453 +P ++ R R G I +DDFGTGYSSLSYL+ V ILKID+SFV L Sbjct: 902 LVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSG 961 Query: 454 YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 + + ++++A L +K VAEG+E+ +Q L+Q G Y QG++YS+ + + Sbjct: 962 DRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVR 1021 Query: 514 Q 514 + Sbjct: 1022 R 1022 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 89/392 (22%), Positives = 165/392 (42%), Gaps = 28/392 (7%) Query: 142 RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIA--------- 192 R ++G A M+ A+ + A G+ +V+ + Sbjct: 438 RINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILHKV 497 Query: 193 -QGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPL 249 T L + E + + + P + +++ A T M + K R + + Sbjct: 498 RAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNRYQFYAP 557 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 + + + S L+ A++ + +HYQP + L + +I G EAL RW Sbjct: 558 EMNARG----------QELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWK 607 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT 368 ++P F+PL + TGL P+ ++R+ IS+N+ + Sbjct: 608 HPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSARQFR 667 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTG 427 + + + + ++ + P + LE+TE D + I++ G + +DDFGTG Sbjct: 668 EDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTG 727 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHI----IEMAKTLKLKMVAEGIETSKQE 483 YSSL+YL+ +D LKID++F+ I I + L L++VAEG+ET++Q Sbjct: 728 YSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQL 787 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +LR+ QG+ +S+ LP + + +H Sbjct: 788 AFLRRRACDLIQGFHFSRPLPADALTPFLARH 819 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 170/342 (49%), Gaps = 18/342 (5%) Query: 180 AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISII-TWASTKMLQ-K 237 + +++ + + + + + + + + P + +I A T M Q K Sbjct: 626 SESLIKSLATHVVEALGKPFNLGGQDIFVSASVGIANYPFDGRDTGVILKNADTAMYQAK 685 Query: 238 GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG 297 R F + + L RR+Q+ L+ A+E + +H+QP VSL +G Sbjct: 686 KSGRNNFKFYNARMNESL---------TRRLQT-ETLLRGALERDEFILHFQPKVSLTDG 735 Query: 298 KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ- 356 +I G EAL RW + +SP FIP+ + TGL P+ + +IR V E + W H + Sbjct: 736 RISGLEALLRWNHPEQGMVSPADFIPILEDTGLIIPVGVWVIRKVCETLKRWEENHIRLV 795 Query: 357 HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREA 415 I+INL L + + + ++ ++ Y +NP + ELTE DP+++ I+ + Sbjct: 796 PIAINLSVRQLQVKGLAETVKHIVEAYGINPALLEFELTESMLMIDPESAVEILRDIKSY 855 Query: 416 GHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLK 471 G + +DDFGTGYSSL+YL+ +D LKID++F+ + E +T +I +A L L Sbjct: 856 GISLSVDDFGTGYSSLAYLKRFPLDALKIDRAFIKDITSNHEDAAITRAVIVLAHELGLN 915 Query: 472 MVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 ++AEG+ET Q E L +G QG+L+SK + ++ + Sbjct: 916 VIAEGVETVDQLELLVTYGCDQMQGYLFSKPVISDECAAMIK 957 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 96/361 (26%), Positives = 159/361 (44%), Gaps = 21/361 (5%) Query: 163 DVIPYSSWQIDAAIIGNA--HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP 220 DVI ++ N N + ++ + E + + I + P Sbjct: 694 DVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDN 753 Query: 221 EMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 ++ S++ A + M K R F + + + + L+ A Sbjct: 754 GDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMN----------QYAQERLELELDLRKA 803 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 +E + +HYQP NG+I+G EAL RW D LSP FI +A+ TGL P+ + Sbjct: 804 LERDEFVLHYQPQFD-PNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWV 862 Query: 339 IRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 I + WL Q P +IS+NL + + +++ I + P + LELTE Sbjct: 863 IDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTES 922 Query: 398 EFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK- 455 + + + ++ G + +DDFGTGYSS+S L+ V+ LKID+SFV L Sbjct: 923 IMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDK 982 Query: 456 ---NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + II MA L L ++AEG+ET +Q E+L+ QG+ +S+ + D ++ Sbjct: 983 EDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQYL 1042 Query: 513 E 513 + Sbjct: 1043 Q 1043 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 142/256 (55%), Gaps = 11/256 (4%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 + L+ A++ + +HYQP V++ G+IVG EAL RW + +SP +FIP+A++TGL Sbjct: 623 LENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIAEETGL 682 Query: 331 SEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 L ++R+ + W + ++INL + + +++ +I +NP+Q Sbjct: 683 IVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTGLNPQQ 742 Query: 390 IALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE + + + I+ + G I +DDFGTGYSSL+YL+ L + LKID+SF Sbjct: 743 LELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNTLKIDQSF 802 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 + L + + +I + K L LK+VAEG++ +Q E LR QG+L+S+ L Sbjct: 803 IQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLS 862 Query: 505 KE---DFLR--WAEQH 515 + D L+ W +++ Sbjct: 863 VDSTTDILQANWLQRN 878 >UniRef50_Q7NXP8 Probable sensory box/GGDEF family protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXP8_CHRVO Length = 712 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 82/259 (31%), Positives = 135/259 (52%), Gaps = 6/259 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 + +R L+ AI++ ++ +HYQP + L+ ++VG EAL RW + P FI Sbjct: 442 QQMRERVELEKSLRHAIDHGELVLHYQPQIELSTRRVVGVEALVRWQHPQKGMIPPMRFI 501 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMIN 381 P+A+Q+GL PL ++R + W + +++NL T ++P + D++ Sbjct: 502 PIAEQSGLILPLGRWVLREACRQLKVWQDKGRDDLRMAVNLSVAQFTDHELPDFVADVLK 561 Query: 382 HYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 V+PR + LE+TE P+ S ++ R+R G +DDFGTG+S+L+YL VD Sbjct: 562 ETGVSPRHLELEITESCTMLSPQQSIGMMERFRAMGIHSSIDDFGTGHSALAYLTRFPVD 621 Query: 441 ILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 LKID+SF+ + + I +A + L++VAEG+ET +Q +L V QG Sbjct: 622 TLKIDQSFIRNISNDEKGTALCDTIAYLAHRMGLQVVAEGVETQQQLTFLSSIHVDVVQG 681 Query: 497 WLYSKALPKEDFLRWAEQH 515 +L K LP + + Q Sbjct: 682 YLLCKPLPAVEAEAFILQQ 700 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 149/297 (50%), Gaps = 17/297 (5%) Query: 226 IITWASTKMLQKGWH-RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A + + H R + + L L + L+ A++ + Sbjct: 345 LMKNADLALYRAKEHGRDRYHFYTEELNAHALKQLL----------MEQELRHALQFEEF 394 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 + +QP V+L GKIV EAL RW + PDSFI +A++TGL P+ ++++ Sbjct: 395 TLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACM 454 Query: 345 DMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 M I++NL + K+ Q + + +N + P + LE+TE D Sbjct: 455 QMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDI 514 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VT 458 + + R R+ G + +DDFG+GYSSLSYL+ L V+ LK+D+ FV + + +T Sbjct: 515 QAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEIT 574 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II +A L+LK+VAEG+ET++Q+E+L + + QG+ +SK L ED + +H Sbjct: 575 SAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFEDLYIYLNEH 631 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 89/332 (26%), Positives = 155/332 (46%), Gaps = 18/332 (5%) Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIW 246 +I E + I + P +N +++ + M K R + + Sbjct: 553 QKILDSFALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQF 612 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 L R I L+ A+E ++ ++YQP++ + + + G EAL Sbjct: 613 FTDELNKSAYE--------RHILGL--DLRYALERNELLLYYQPVMDMPSHNLYGVEALL 662 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESP 365 RW + ++PD FI LA++TGL P+ +IR+V + W Q ++INL + Sbjct: 663 RWRHPEQKLITPDKFINLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSAR 722 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDF 424 + + + + +++ V + IALE+TE D + ++R G I +DDF Sbjct: 723 QFRDKDLIKNISRILSETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDF 782 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYL+ + LKID+SFV L + + II MA +L+++++AEGIE Sbjct: 783 GTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIE 842 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +Q ++L ++ QG+ +SK + + Sbjct: 843 EQLDFLVTQKCNHYQGYYFSKPVTVSEIELML 874 >UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJT4_ALKOO Length = 504 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 77/253 (30%), Positives = 135/253 (53%), Gaps = 4/253 (1%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 + R + L A+E ++ ++YQP + +IVG EAL RW +SP FIP+ Sbjct: 249 MNRKLELINNLHKALEKKEFELYYQPQIDSETNEIVGLEALLRWQNPTLGRVSPAEFIPV 308 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHY 383 A++TGL P+ ++++ W ++ +S+N+ + + ++ Sbjct: 309 AEETGLIIPIGDWVLKTACAQNATWQKEGYKPIPVSVNISTIQFNEPLFVDKVVTILKET 368 Query: 384 QVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 +NP+ + LE+TE D + +++R ++ G +I LDDFGTG+SSL YL +++L Sbjct: 369 TLNPKWLHLEITESVAINDATLTINVLNRLQKIGVKIALDDFGTGFSSLGYLSKFKINVL 428 Query: 443 KIDKSFVDALEYKN--VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 KID SFV + +T II + K L +++VAEG+ET++Q ++L+ G QG+L+S Sbjct: 429 KIDSSFVQDIGEDESTITKTIIVLGKNLNMEVVAEGVETNEQLDYLKNAGCDIIQGYLFS 488 Query: 501 KALPKEDFLRWAE 513 LP + + Sbjct: 489 SPLPAGQIEKMFK 501 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 145/258 (56%), Gaps = 8/258 (3%) Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 + L+ AIE ++ HYQPI SL GK++G EAL RW + +SP FIP+A+ Sbjct: 445 KRLQMEIELRQAIEQQEFIAHYQPIFSLTTGKLIGFEALIRWQHSQKGLISPAEFIPIAE 504 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHY 383 +TGL P+ I+ + W Q+ +H IS+NL S L + Q + ++ H Sbjct: 505 ETGLIVPMGKWILLEACTQLKQWQEQYDHEHILQISVNLSSKQLRDPYLVQEIDKILTHT 564 Query: 384 QVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 ++NP+ + +E+TE + T+ I+ + +E ++ LDDFGTGYSSLSYL VDIL Sbjct: 565 EINPQNLKIEITESLLMENFDTAMNILLQLQERNTQLCLDDFGTGYSSLSYLHRFPVDIL 624 Query: 443 KIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID+SFV + N + II +A +L ++++AEGIET Q L+ GQG+L Sbjct: 625 KIDRSFVMQMHSGNNNLEIIRTIITLAHSLNMRVIAEGIETESQLSQLKSLNCEQGQGYL 684 Query: 499 YSKALPKEDFLRWAEQHL 516 +SK +P+E ++ L Sbjct: 685 FSKPVPQEVAESLIKESL 702 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 133/259 (51%), Gaps = 6/259 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 RI R RL+ A+ + + +HYQP V L +G+I+GAEAL RW + + P FI Sbjct: 884 RIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDPEQGLIPPVRFI 943 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMIN 381 P+A+ TGL + ++ WL P +++N+ + + ++ Sbjct: 944 PVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQADLATQVMQVLV 1003 Query: 382 HYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 + P + LELTE + + + ++ R R G + +DDFGTGYSSL+ L+ +D Sbjct: 1004 ETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYSSLASLKRFPID 1063 Query: 441 ILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 +LKID+SF+ + + II M +L + ++AEG+ET++Q +L+Q QG Sbjct: 1064 VLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAFLQQRNCDRYQG 1123 Query: 497 WLYSKALPKEDFLRWAEQH 515 +L S+ LP + F + + Sbjct: 1124 FLRSRPLPAQAFEQLLREQ 1142 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 90/362 (24%), Positives = 158/362 (43%), Gaps = 20/362 (5%) Query: 163 DVIPYSSWQIDAAIIGNAHNVV--ITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP 220 D + ++ + +V + + +I E + I I P Sbjct: 344 DTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPND 403 Query: 221 EMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 + ++I A M K R + + R + + L+ A Sbjct: 404 GRDTETLIKNADMAMYRAKEQGRSRYHLYTSSM----------DEQAFRRLTMENSLRKA 453 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 ++ + ++YQP V++ G+IV EAL RW + + P+ FIPLA+ TGL PL + Sbjct: 454 LQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWV 513 Query: 339 IRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 +R+ W +P +++N ++ ++ ++ + P + LELTE Sbjct: 514 LRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTEN 573 Query: 398 EFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK- 455 + + + ++R G I +DDFGTGYSSLSY++ L + LKID+SFV + Sbjct: 574 VMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNA 633 Query: 456 ---NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + +I MA++L+L ++AEG+ET +Q + L QG+L+SK LP + Sbjct: 634 DDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLL 693 Query: 513 EQ 514 Sbjct: 694 SN 695 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 86/251 (34%), Positives = 146/251 (58%), Gaps = 6/251 (2%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 L++AIE +++ +HYQP + L +G +VG EAL RW + + + P FIPLA++ GL Sbjct: 613 MESALRNAIERKELVLHYQPQLDLNSGDLVGVEALVRWQRPEIGLVPPGLFIPLAEEIGL 672 Query: 331 SEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 + L ++ DW RQ +++NL + S +PQ + ++ + + ++ Sbjct: 673 INDIGLWVLEEACRQTIDWDRQGYHVPRMAVNLAVQQIESGHLPQQVLQILQYTGLPAQR 732 Query: 390 IALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE +PK +A + ++ G + +DDFGTGYSSL+YL+ L +D LKID+SF Sbjct: 733 LELEVTESAIMIEPKKAADALLEFQSMGIRLAIDDFGTGYSSLAYLKRLPLDRLKIDRSF 792 Query: 449 VDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + ++ II ++ +L + VAEGIE + Q E+LR+ G GQG+L+SK LP Sbjct: 793 VMDIGTNAGDDIISRAIINLSNSLGMDTVAEGIENTDQLEFLRREGCEIGQGYLFSKPLP 852 Query: 505 KEDFLRWAEQH 515 + + + +++ Sbjct: 853 ADAVMAFMDKN 863 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 86/304 (28%), Positives = 144/304 (47%), Gaps = 18/304 (5%) Query: 215 DILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPH 272 + P + +++ A M K R F + R L R+ + Sbjct: 556 AVYPDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNA---------RSLERL-ALE 605 Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 L A+ ++ +++QP++ G++V EAL RW D +SP FIPLA+ TGL Sbjct: 606 TALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIV 665 Query: 333 PLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 P+ ++RS E W H+ +N+ + E ++ ++ + P + Sbjct: 666 PIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLT 725 Query: 392 LELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LELTE D + + R G + +DDFGTGYSSL+YL+ +D LKID+ FV Sbjct: 726 LELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVR 785 Query: 451 ALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 ++ + I+ + +L L++VAEG+ET+ + LR+ G QG+ +S LP E Sbjct: 786 GIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWE 845 Query: 507 DFLR 510 +F++ Sbjct: 846 EFVK 849 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 138/266 (51%), Gaps = 10/266 (3%) Query: 257 AAMFVLRILRR---IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 A+F + RR + + L+ A+ + +H+QP V A+ ++GAEAL RW + Sbjct: 571 YAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAEALIRWRHPEK 629 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKI 372 ++P FIPLA+++GL P+ +R + + W + +S+N+ + + Sbjct: 630 GLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTL 689 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 + +R ++ + P + LE+TE D + + + ++ G + +DDFGTGYSSL Sbjct: 690 VETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSL 749 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 +YL+ +D LKID++FV + + + II +A+ L +VAEG+E +Q E+L Sbjct: 750 NYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLG 809 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAE 513 QG+LYS+ LP +F + Sbjct: 810 SRDCQNFQGFLYSRPLPPAEFTTFLR 835 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 91/303 (30%), Positives = 154/303 (50%), Gaps = 19/303 (6%) Query: 221 EMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI 279 E I+ A T M K R + + I L + + L+ AI Sbjct: 600 EHPSQILRDADTAMYYAKNNGRGKYQVFDSSMHIHAL----------KQLQLENDLRRAI 649 Query: 280 ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLII 339 E ++ V+YQPI+ L NG ++G EAL RW +SP FIP+A++TGL L ++ Sbjct: 650 ERDELVVYYQPIICLKNGTLIGVEALVRWQHPQEGMISPAEFIPIAEETGLIIELDQWVL 709 Query: 340 RSVFEDMGDWLRQHPQQH---ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 + + M W ++ +S+NL + + + + +++ ++ + + LE+TE Sbjct: 710 NTACQQMRFWQEKYSDFKSITLSVNLSGRQFSQPDLIKNIDNILTQNKLEKQYLKLEITE 769 Query: 397 REFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK 455 +P ++A ++ + E + LDDFGTGYSSL YL +D+LKID+SFV +E Sbjct: 770 TVLIENPNSAAEMLEQLIERKVTVCLDDFGTGYSSLGYLHRFPLDVLKIDRSFVSNIETN 829 Query: 456 ----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 + II +A+ L+++++AEGIET +Q E+L+ G HYGQG+ +S + + + Sbjct: 830 TSNSTIIRTIITLARELEIEVIAEGIETEQQREFLQSLGCHYGQGYWFSPPVDGRELISL 889 Query: 512 AEQ 514 Sbjct: 890 VNH 892 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 130/518 (25%), Positives = 229/518 (44%), Gaps = 40/518 (7%) Query: 14 LILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIR-ANKVATQGKDALQELERWQGA 72 L+LS+ +P+G+ I LA V T +++ + S + +R ++ ++ A ++ Sbjct: 8 LMLSIFIPLGIMISLAFV-VSTLILKQDISISGKTLLRFSSDMSAVSWRATKKAALLVNR 66 Query: 73 ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCS--SLEHESPPDTFPEPGKISKDGYRV 130 C L + R YI+++ ++N CS S E P + R+ Sbjct: 67 RC-PDMLDALTRTRAFTPYIRDIGVLENGEMTCSFVSGEKRQPFSQLSGLTLPALLPERM 125 Query: 131 WLTSH-----NDLGIIRYMVAMGTAHYVVMIDPASFI----DVIPYSSWQIDAAIIGNAH 181 L + D +I Y + V I + +I D++ + +GN Sbjct: 126 ILVAKRMAEGPDRPVILYAEKISAQKAVFTIVDSQYIQELMDILAAERSSVFRLTMGNG- 184 Query: 182 NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHR 241 N +++ D + +T+ +I + S L W + Sbjct: 185 NAIVSGVDSGEKPFLTQR-----------------FTSANGDIHLRVETSFSTLSAWWLQ 227 Query: 242 QVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVG 301 + I++ L L L + R ++ S ++ I N + VHYQP+ ++ G Sbjct: 228 NLLIFILLSLCFSFLFVLLYRRWRQKSLSLGREIERGIANNEFQVHYQPVFNVGRSACGG 287 Query: 302 AEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISIN 361 AEAL RWPQ G ++SPD FI A+ G LT + + +D+ W + +IS+N Sbjct: 288 AEALLRWPQPHGRFISPDIFITAAENEGKIVALTRHLFDLIAKDVSRW-KVPEGFYISVN 346 Query: 362 LESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIY 420 + L S+ + + + + LELTER +P + + R EI Sbjct: 347 IAPEHLISDDFVSDVMALKER--LAKLGLILELTERSLIAEPAKVSAKLELLRSQQVEIA 404 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEG 476 +DDFGTGY SLSYLQ L D LKID++F++ ++ + II +++ L L++VAEG Sbjct: 405 IDDFGTGYCSLSYLQQLPADYLKIDRTFINTIDTSGSDVPILDTIITLSQNLGLQVVAEG 464 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 + + Q ++ GV+Y QG+LY++ + DF+ W ++ Sbjct: 465 VSSKHQLRYILDQGVNYIQGYLYARPMSSADFMVWLDK 502 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 17/302 (5%) Query: 218 PLPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 E +++ A M K + + + + G L + L+ Sbjct: 539 RDGEDVQALLRCADIAMYRAKDSGKNDYQFYESTMSTGGLERL----------KLEGDLR 588 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 A++ + +HYQP V++ G IVGAEAL RW D L P FIPLA+++G P+ Sbjct: 589 YALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGE 648 Query: 337 LIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 ++R+ W P +S+NL + + + + ++ ++P + LE+T Sbjct: 649 WVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEIT 708 Query: 396 EREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD---- 450 E + + + + E G + +DDFGTGYSSL YL+ + LKID+SFV Sbjct: 709 ESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPS 768 Query: 451 ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 ++ + II + KTL LK+VAEG+ET +Q LR + QG+L+S+ + + Sbjct: 769 NIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTE 828 Query: 511 WA 512 + Sbjct: 829 FL 830 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 90/245 (36%), Positives = 138/245 (56%), Gaps = 6/245 (2%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 L+ AIE + +HYQP + LA GK++G EAL RW +SP FIPLA++TGL Sbjct: 606 LEADLRKAIERNEFVLHYQPQIELATGKLIGVEALIRWQHPCLGMVSPALFIPLAEETGL 665 Query: 331 SEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 P+ +++ W + P+ +++NL + L I + +I ++NPR Sbjct: 666 ICPIGEWALKTACHQYQIWQQAGLPKIQMAVNLSAFQLQQYDIVARIAKIIQETRINPRD 725 Query: 390 IALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE + + II + ++ G +I +DDFGTGYSSL+ L+ L V+ LKIDKSF Sbjct: 726 LELEITETTVIQNLERMTSIIEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVNTLKIDKSF 785 Query: 449 VDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V L + II + K KL+++AEG+ET KQ E+L+ G + QG+L S+ +P Sbjct: 786 VQDLSNDPNDAKLCQAIIMLGKAFKLEVLAEGVETIKQLEFLKNCGCDHAQGFLISRPVP 845 Query: 505 KEDFL 509 + L Sbjct: 846 PDALL 850 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 103/365 (28%), Positives = 178/365 (48%), Gaps = 21/365 (5%) Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISII 227 A + G+ +++ E+ + I R+ ++ II +I I Sbjct: 510 RPDDTVARLGGDEFVILLDDLLEVEESI--RIAHRIQTLVQQPFIINGQTVFTSASIGIA 567 Query: 228 TWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILR-----RIQSPHHRLQDAIENR 282 + + + R I + G + ++ R+Q L+ A+E + Sbjct: 568 PKDTHHHKPEHYLRNADIAMYRAKAAGGSRHVLFTSVMHTSALVRLQ-LETDLRQALERQ 626 Query: 283 DICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 ++ + YQPI+ L +IVG EAL RW ++P FI +A++TGL P+ +++ Sbjct: 627 ELRLQYQPILCLNTDQIVGFEALVRWQHPRDGLIAPGHFITVAEETGLIVPIGEWVLQEA 686 Query: 343 FEDMGDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF 399 M W Q +S+NL S L+ + Q + M+ + P+Q+ LE+TE Sbjct: 687 CRQMQCWHTQFGQVLPLMVSVNLSSKQLSQPDLLQQVDRMLAETGLRPQQLKLEITESMI 746 Query: 400 ADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EY 454 D + + + + +E ++ +DDFGTGYSSL+YL L +D+LKID+SF+ + E Sbjct: 747 LDNTEVARQTLLKLKERQIQLSMDDFGTGYSSLNYLHRLPIDLLKIDRSFIHEMDSGEES 806 Query: 455 KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL---PKEDFLR- 510 + + II +A +LK++++AEGIET Q E L + G +GQG+L+S L P DFL+ Sbjct: 807 RELVRAIISIAHSLKMQVIAEGIETRSQLEQLHELGCEFGQGYLFSTPLDPEPAADFLQQ 866 Query: 511 -WAEQ 514 + +Q Sbjct: 867 AFLKQ 871 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 93/256 (36%), Positives = 147/256 (57%), Gaps = 6/256 (2%) Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 R Q + A+E R+ +HYQP + LA+G +VGAEAL RW + W+SP+ FIP+A Sbjct: 375 REQQYLESGILQALERREFHLHYQPKIHLASGNVVGAEALIRWQRPQQGWISPELFIPVA 434 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 + +GL ++ ++ W P +SINL + ++ Q LRD ++ Sbjct: 435 EDSGLITRISQWVLGEATRQCRAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDALSDNA 494 Query: 385 VNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 ++P + LE+TE + + + + + G + +DDFGTGYSSLSYL+ VD+LK Sbjct: 495 LDPAWLELEITEGVLLQNVEVTLATLLAIKALGVRLAVDDFGTGYSSLSYLRKFPVDVLK 554 Query: 444 IDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SF+ L +++ + II + ++L LK++AEG+ET +Q +L+Q G QG+ + Sbjct: 555 IDQSFIHGLSHEHKDAVLVSAIINLGRSLNLKVIAEGVETHQQLTFLQQQGCEEAQGYYF 614 Query: 500 SKALPKEDFLRWAEQH 515 SKALP EDF R +H Sbjct: 615 SKALPAEDFARLLGKH 630 >UniRef50_Q1H3Q9 Putative signaling membrane protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Q9_METFK Length = 516 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 144/508 (28%), Positives = 234/508 (46%), Gaps = 24/508 (4%) Query: 13 VLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGA 72 ++ +VL ++L + + ++L +YS+ + RA VA + + L + A Sbjct: 18 LVAFAVLFFAMAFLFLGNVVMLQGDRQDLQSYSNDLFARAVAVAAETEKILDS-DWGTEA 76 Query: 73 ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDG-YRVW 131 CSE L MR V + R +++V ++ N CS+ P + P G R W Sbjct: 77 PCSEDDLDRMRYVIFYSRMLRDVGRLEVNRLLCSAGWGALPDELQALPPSQYHIGAVRFW 136 Query: 132 LTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEI 191 N V PA+F + + G VV + + Sbjct: 137 SKIINPAHPQVISDIAAKGDIFVATSPAAF--------DRFSSPPSGIGAKVVTSDGQYV 188 Query: 192 AQGI--ITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKMLQKGWHRQVFIWLP 248 + + P E + G + E + +++ + L + Sbjct: 189 FEKFGEADAINYVPAEQWRDQGSTLRFVRCDEKYALCVVSQKTDGGLFSREIVLPVVLAL 248 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 G + GL A + + LR QS RL+ + + + +HYQP+ L++GK+VGAEALARW Sbjct: 249 AGTLFGLFAGLVGVIQLRHQQSLPVRLRKMLREKSLVLHYQPLRVLSSGKLVGAEALARW 308 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLT 368 P +GS +SPD FIPLA++ GL LT L++ +MG LR+ P +ISIN+ + L Sbjct: 309 PLHNGSSVSPDKFIPLAEELGLMSELTRLVVEKALAEMGARLREDPGFYISINITAADLL 368 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGY 428 ++L + H+ V+P Q+ LE+TER +D + + G Y+DDFGTGY Sbjct: 369 DHDFGKVLDASVKHHGVSPAQVVLEITERTTSDYSQLDGAMRSLSQKGFRFYMDDFGTGY 428 Query: 429 SSLSYLQDLDVDILKIDKSFVDALEYKNVTPH----IIEMAKTLKLKMVAEGIETSKQ-- 482 S+L L L +D +K+DK FV A+ + I ++A+ L++ +VAEGIET++Q Sbjct: 429 SNLGSLAQLPLDAIKVDKVFVKAIGTDSPVAEMFGPISKIAQDLRVNIVAEGIETAEQSS 488 Query: 483 --EEWLRQHGVHYGQGWLYSKALPKEDF 508 +W+ GQGWL + +P F Sbjct: 489 GVLQWVPDA---IGQGWLLGRPVPAAMF 513 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 87/296 (29%), Positives = 152/296 (51%), Gaps = 18/296 (6%) Query: 226 IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A + M K R + + I R + L++AI ++ Sbjct: 578 LLRNADSAMYEAKRNGRNGYRLYTSAM---------TEEISERF-ALTEELREAISREEL 627 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +++QP V + G I+GAEAL RW + PD FIP+A+ +G + ++ V Sbjct: 628 ELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESSGQMIKIGAWVLEQVCA 687 Query: 345 DMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 + W + I++N+ + + ++ + + +++ + +P + LE+TE +P Sbjct: 688 KVAGWKERGIVAPKIAVNISNQQ-MNRELVEQITELLASSKCDPACLELEITESCLMENP 746 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 + A +S + G I +DDFGTGYSSLSYL+ L ++ LK+D+SFV L+ +T Sbjct: 747 EQMAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDRSFVSDLQDDENDLAIT 806 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 I+ M +++ L ++AEGIET +Q + L + GQG+ YSK LP+E FL + +Q Sbjct: 807 RAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKPLPEEQFLAYLDQ 862 >UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FF8_SACD2 Length = 581 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 80/248 (32%), Positives = 127/248 (51%), Gaps = 6/248 (2%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 + L+ A+E + + YQP V L GKI+G EAL RW +SP FIPLA++TGL Sbjct: 318 MENDLRRALEQDEFILFYQPQVHLRTGKIIGLEALIRWQHKTKGVISPLDFIPLAEETGL 377 Query: 331 SEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 E + ++ E WL+Q +++NL + + + + +N ++ P+ Sbjct: 378 IEEVGAWVLAHACERFHHWLKQGLSLGKVAVNLSARQFRQAHFAETVVEALNKSKLPPQY 437 Query: 390 IALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE D + + G I +DDFGTGYSSLSYL+ V+ LKID++F Sbjct: 438 LELEITESLTMQDTDEVLQTLGYLNKLGLSIAIDDFGTGYSSLSYLKKFPVNKLKIDRTF 497 Query: 449 VDA----LEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 + L+ + II++A + + +VAEG+E Q WL G QG+ + K L Sbjct: 498 IHDVGSELDDGAIAKSIIDLAHNMSMLVVAEGVERLGQSRWLYDQGCDQVQGYYFCKPLS 557 Query: 505 KEDFLRWA 512 + + L+ Sbjct: 558 ENELLKLL 565 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 6/257 (2%) Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 I + + + A+E RD ++YQP V+L G + G E+L RW +SP FI Sbjct: 795 NISNKRLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFI 854 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQLLRDMIN 381 P+A++TGL P+ L I+ + + +++NL + S + + + + +N Sbjct: 855 PVAEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLN 914 Query: 382 HYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 + ++P + E+TE + + S + R G + +DDFGTGYSSLSYL+ ++ Sbjct: 915 NSAIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPIN 974 Query: 441 ILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 LKID+SF+ L + + II MA+ L L +VAEG E ++Q +L++ G QG Sbjct: 975 TLKIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQG 1034 Query: 497 WLYSKALPKEDFLRWAE 513 + +S+ LP+ D R + Sbjct: 1035 YYFSRPLPQTDLERLLK 1051 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 17/305 (5%) Query: 218 PLPEMNISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 ++I+ A T + K + + G+ R+ + L+ Sbjct: 555 RDGTRREALISAADTALHYVKAHGSNHYQFHEPGMTAA---------AAERLH-LENDLR 604 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 +A+ + ++YQP++ + GAEAL RW + + PD FIPLA++TGL P+ Sbjct: 605 EALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGT 664 Query: 337 LIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 ++R W R +S+N+ +++PQ +R + + P + LE+T Sbjct: 665 WVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEIT 724 Query: 396 EREFADPKTSAPI-ISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL-- 452 E + + + G + LDDFGTGYSSLSYL+ +D LKIDKSFV + Sbjct: 725 ESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVR 784 Query: 453 --EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + + +I M L L++VAEG+E+++ LR+ QG+ +S+ LP R Sbjct: 785 DEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPARALSR 844 Query: 511 WAEQH 515 W +QH Sbjct: 845 WIQQH 849 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 19/357 (5%) Query: 167 YSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-S 225 + + + +I + I + + R + I + P + + Sbjct: 377 QGGDEFIILLPADNEECLIEKTCAIKEALSARYNIDQHQFFITPSIGVSLYPRNGEDFDT 436 Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 + A M K R + + + I R + + L DAIE ++ Sbjct: 437 LYQRADAAMYHAKHTGRNRYAFFTEEMQA----------ISTRALTLGNALHDAIERQEF 486 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP +SL GKI+GAEAL RW + +SP FIPLA++ G + ++R Sbjct: 487 SLHYQPQISLITGKIIGAEALIRWHSLELGHVSPGEFIPLAEENGQILAIGEWVLRETAR 546 Query: 345 DMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADP 402 + WL + I++NL +P ++ ++N Y V + + LELTER DP Sbjct: 547 QLKQWLEEGITPVRIAVNLSYAQFQVNDLPSIVEAILNEYAVPAQYLELELTERIATKDP 606 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VT 458 + + I+ +++ G +DDFGTGYSSLSYLQ V LKID+SFV + + Sbjct: 607 EHTITILESFQQLGIHTSIDDFGTGYSSLSYLQRFPVYKLKIDQSFVRNMTTNTNDQVIV 666 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF-LRWAEQ 514 II +A+ L + +AEG+ET Q E L G QG+ S+ +P E+F + + ++ Sbjct: 667 GTIILLAQQLGMTTIAEGVETKAQLEMLYNIGCDDIQGYYISRPIPAEEFKIGFLQK 723 >UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAA4_KANKD Length = 1128 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 117/417 (28%), Positives = 191/417 (45%), Gaps = 30/417 (7%) Query: 116 TFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAA 175 + K + +WL N I ++G +++ + I + Sbjct: 717 LLDDSFKQKQAMTVMWLDLDNFKTI---NDSLGHQVGDLILIEVANRLRFELGKQSIISR 773 Query: 176 IIGNAHNVVITSSDEIAQGII-TRLQKTPGEHIENNGIIYDILPLPEMNIS--------- 225 I G+ V+ ++E + +I + + I+ N I I P + IS Sbjct: 774 IAGDTFAAVLPLTNEHSAALIAKNVLEVVQRQIKFNSHILSISPSIGLAISPNDGQSADK 833 Query: 226 IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I A T M K R F + + L R L++A+ N Sbjct: 834 LIMCAETAMYRAKHDGRNTFRFFAQEMQEHSL----------RSLQLSIALKEALTNDQF 883 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 + YQP +SL+N +VGAEAL RW + +SP FIPLA+Q+GL + +I+ V + Sbjct: 884 HLVYQPQMSLSNNSMVGAEALLRWEHPEWGTVSPAEFIPLAEQSGLIVQIGEWVIQQVAQ 943 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADP 402 WL + P+ I++NL + + + + ++ V P I +ELTE DP Sbjct: 944 QQKSWLERGLPEVIIAVNLSALQFHQPDLVETITSLVRKAGVVPENIEVELTEAVALKDP 1003 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF----VDALEYKNVT 458 + + I AG ++ +DDFGTGYSS+SYL+ V LKID+SF V ++ + + Sbjct: 1004 EVAGTTIDALSRAGFKVSIDDFGTGYSSMSYLKKFAVHKLKIDQSFIKDIVTDIDDQAIV 1063 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II+MA +L +AEG+ET +Q ++LR+ G QG+ YS+ L E F ++ + H Sbjct: 1064 TAIIQMAHSLHKTTIAEGVETQEQLDFLRKKGCEEMQGYWYSRPLVTEQFEQFLKSH 1120 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 82/372 (22%), Positives = 158/372 (42%), Gaps = 26/372 (6%) Query: 142 RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQK 201 R + + + + F+ ++P + + A + + + I + Sbjct: 731 RLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDGHELFVTPS 790 Query: 202 TPGEHIENNGIIYDILPLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMF 260 N+G+ + +++ A T M Q K R + + + Sbjct: 791 IGICFYPNDGVTVN---------ALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYF- 840 Query: 261 VLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 L+ A++ + V YQP++ L +I EAL RW + P Sbjct: 841 ---------QIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQ 891 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI-SINLESPVLTSEKIPQLLRDM 379 FI +A+++GL + +++R + W+ + I ++NL + + + + Sbjct: 892 FITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICRI 951 Query: 380 INHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 + Y + P +I LE+TE D + + + G + +DDFGTGYSSL+YL+ Sbjct: 952 LRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFP 1011 Query: 439 VDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 VD LKID+SF+ + + + I+ +A +L L ++AEG+ET +Q + L ++ Sbjct: 1012 VDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFA 1071 Query: 495 QGWLYSKALPKE 506 QG+ +K +P E Sbjct: 1072 QGYYMAKPMPAE 1083 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 137/294 (46%), Gaps = 16/294 (5%) Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++ A T M Q K + F + + + L+ A+E Sbjct: 537 LLKHADTAMYQAKAAGKGRFNFYSAEMT----------KREEHRLELETALRQAVEEGQF 586 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 VHYQP +LA ++ G EAL RW +SP FIPLA++ L + + + ++R Sbjct: 587 QVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACR 646 Query: 345 DMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK- 403 W Q +++NL + + +P+ +R ++ + LE+TE D + Sbjct: 647 KGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEV 706 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTP 459 ++ R R G ++ +DDFGTGYSSLSYL+ L V+ LKID+SFV + + + Sbjct: 707 DQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVS 766 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 II +A +L LK+VAEGIE Q L QG+L +K +P E + Sbjct: 767 SIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMPAEQAGIFLN 820 >UniRef50_B6BNN5 Ggef/eal/pas/pac-domain containing protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNN5_9PROT Length = 835 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 17/364 (4%) Query: 156 IDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYD 215 I FI + + I I N+ + + + + + + E + Sbjct: 481 IRGGDFIARLDGDKFAIILEDINNSDDAAMFAKEIMEEVEKPFYLSNTSEVHICSTAGIV 540 Query: 216 ILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHH 273 I P E +I +A T + + K R + L + ++ Sbjct: 541 IAPENAETAEELIQFADTALYKGKKDKRGGISYYSDELT----------ELAKKHIELAT 590 Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 RL+ AIE+ + ++YQP V + + +IVGAEAL RW +SP+ FIPLA++TGL Sbjct: 591 RLRRAIEHSEFELYYQPQVHIKSKRIVGAEALIRWNDPIHGLISPNDFIPLAEETGLIGA 650 Query: 334 LTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALE 393 + +IR W+ + IS+N+ + L + I +L+ + ++ +E Sbjct: 651 IGEWVIRDACRQGKLWIDKGYNLSISVNVSANQLRHQNITRLIDSTLKETGFTADKLVIE 710 Query: 394 LTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL 452 LTE + + ++ R G + +DDFGTGYSS SYL+ +DILKIDKSF+D + Sbjct: 711 LTESAVMQREEEAVAMLHAIRAKGIRLAIDDFGTGYSSYSYLKRFPIDILKIDKSFIDEV 770 Query: 453 ----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 + + II M L K++AEG E +Q ++L +HG Y QG+ SK L +F Sbjct: 771 PFENDDMAIVKAIIAMGSALGYKILAEGTEHIEQIDFLEEHGCQYYQGYYKSKPLKTSEF 830 Query: 509 LRWA 512 + Sbjct: 831 EKLL 834 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 101/336 (30%), Positives = 155/336 (46%), Gaps = 19/336 (5%) Query: 188 SDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFI 245 S+++ + T + I + P N S+I +A T M K R F Sbjct: 1181 SEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRNNFQ 1240 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 + L I R L+ AI ++ + YQP SL +G + G EAL Sbjct: 1241 FYTHKLN----------EIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEAL 1290 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLES 364 RW T+ +SP FIPLA++TG+ + +I + + +W +++NL + Sbjct: 1291 LRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSA 1350 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 L I + + + + + LELTE +P+ S I+S+ + G I +DD Sbjct: 1351 RQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDD 1409 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSLSYL+ +D LKID+ FV + + +T II +A +L+L +VAEG+ET Sbjct: 1410 FGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVET 1469 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 Q +L G QG+L SK L +D L Sbjct: 1470 QAQLNFLGLQGCDEVQGFLLSKPLSAKDCLTLLGNQ 1505 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 90/248 (36%), Positives = 133/248 (53%), Gaps = 6/248 (2%) Query: 271 PHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGL 330 L+ A+E R +HYQPIV A+G +VGAEAL RW + +SP FIP+A++ GL Sbjct: 776 LEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECGL 835 Query: 331 SEPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ 389 P+ ++R V DWL R HP +++N+ +P+L+R ++ + Sbjct: 836 IVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSS 895 Query: 390 IALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + E+TE + + +E G LDDFGTG+SSLSYL+ VDI+KID+SF Sbjct: 896 LVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSF 955 Query: 449 VDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 V + II MA +L L++ AEG+E+++Q E+LR G Y QG+L K L Sbjct: 956 VRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLA 1015 Query: 505 KEDFLRWA 512 + F Sbjct: 1016 ADAFEALM 1023 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 18/308 (5%) Query: 214 YDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 + P +++ +I A M Q K + + +A + R + Sbjct: 679 ISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFY---------SADLSQNAVERF-TL 728 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 ++L+ A+ V+YQ VSL G+I+GAE+L RW + +SP FIPLA++TGL Sbjct: 729 ENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLI 788 Query: 332 EPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 P+ ++R + +W Q +S+N+ + + ++ + Sbjct: 789 IPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLL 848 Query: 391 ALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LE+TE + + + R + G + +DDFGTGYSSLS+L+ L +D +KID+SFV Sbjct: 849 ELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFV 908 Query: 450 DAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 L + + I MA++L ++AEG+ET +Q +L++ G GQG+LYS+ + Sbjct: 909 RDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTA 968 Query: 506 EDFLRWAE 513 +F Sbjct: 969 SEFTALLR 976 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 17/321 (5%) Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLV 252 + E + I + P II A T M K + + Sbjct: 463 MANPFIINSKEFFTSPSIGISVYPKDGQTKDDIIKHADTAMYVAKENGGNNYQFYTPEPT 522 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 +L + + L+ A++N + ++YQP V L +G +VG EAL RW Sbjct: 523 ----------NLLSKKYIIENDLRKALKNEEFLLYYQPQVDLKSGDLVGLEALIRWQHPK 572 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEK 371 + P FIP+A++TG + +I+ W + +++N+ + Sbjct: 573 LGLIPPMDFIPIAEETGYINHIGKWLIKEACRQNKQWQQNGSFYIPVAVNVSPWQFRDKN 632 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 + ++ ++ ++P+ + LE+TE + + + +E G ++ +DDFGTGYSSL Sbjct: 633 FVENIKAALDETNLDPKYLELEITESMMHHFIDTIDKVHQVKEMGIKVAIDDFGTGYSSL 692 Query: 432 SYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 + + L +D LKID+SF+ + + II++ L L +AEG+E +Q +L Sbjct: 693 NAIDQLPIDTLKIDRSFIRDMITNDSKAAIVKTIIDLGNNLHLNTIAEGVEYEEQATFLA 752 Query: 488 QHGVHYGQGWLYSKALPKEDF 508 QG+L+SK LP E Sbjct: 753 NQDCVKAQGYLFSKPLPPEQL 773 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 88/267 (32%), Positives = 138/267 (51%), Gaps = 7/267 (2%) Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 L+R++ L+ A+ ++ +HYQP + LA+G IVG EAL RW + Sbjct: 566 AFYTGELGHGALQRLE-METALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRPGF 624 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKI 372 + P FIPLA++TGL P+ +I + W P +++N+ + ++ Sbjct: 625 GLVPPYRFIPLAEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGGEL 684 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 +L + + V+PR + LELTE P+ + + R G + LDDFGTGYSSL Sbjct: 685 EAVLATALRKHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSL 744 Query: 432 SYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 SYL VD LKID+SF+ + N+ +I +A + LK+VAEG+ET Q +LR Sbjct: 745 SYLSRFPVDELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLR 804 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ++ QG+L+S +P ++F Q Sbjct: 805 KNRCDQIQGYLFSAPVPADEFATLVSQ 831 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 16/296 (5%) Query: 225 SIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 ++I A M Q F + I + AM L+ A++ ++ Sbjct: 769 TLIRNADIAMYQAKEEGNAFRLYAPEMNIVVHEAM----------EMETDLRRALDRGEL 818 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 +HYQP + L +GKI GAEAL RW ++P FIPLA++TGL P+ ++ ++ Sbjct: 819 LLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVLENICL 878 Query: 345 DMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DP 402 + W Q P I+ NL + ++++ ++ ++ + P + LELTE + Sbjct: 879 QIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTESMIMRNV 938 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVT 458 +T+A + G + LDDFGTGYSSL+YL+ VD LKID+SF+ + V Sbjct: 939 QTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAAVA 998 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II +A +L L+ VAEG+ET +Q E+LRQ QG+LYS L E+F Q Sbjct: 999 TSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFTAMLRQ 1054 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 6/255 (2%) Query: 265 LRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPL 324 L+ + + L A++ +I V+YQPI+ L +I EAL RW +SP FIP+ Sbjct: 304 LQERLALENELHGALQRNEIVVYYQPIIDLQTQQITAVEALVRWQHPTRGLVSPAKFIPI 363 Query: 325 AQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHY 383 A+ GL + ++R+ W P +S+NL + + +L+ ++I Sbjct: 364 AEANGLIVEIGEWVLRTACLQNRAWQLAGLPPIRMSVNLSARQFEESNLVELVGEIIQES 423 Query: 384 QVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 ++P + LE+TE D + S I+ + RE G + LDDFGTGYSSL+YL+ V++L Sbjct: 424 GLHPSYLELEVTESSLMADIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNML 483 Query: 443 KIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID+SFV + + VT II +AK+L+LK+ AEGIET +Q +L++ G GQG+ Sbjct: 484 KIDRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYY 543 Query: 499 YSKALPKEDFLRWAE 513 + P + + Sbjct: 544 FGIPAPANEITEILQ 558 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 567 e-160 UniRef50_P77473 Uncharacterized protein ylaB n=106 Tax=Enterobac... 565 e-159 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 560 e-158 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 548 e-154 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 542 e-152 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 534 e-150 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 533 e-150 UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Ent... 533 e-150 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 532 e-149 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 531 e-149 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 529 e-149 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 529 e-148 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 526 e-148 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 526 e-148 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 525 e-147 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 524 e-147 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 523 e-147 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 522 e-146 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 520 e-146 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 520 e-146 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 520 e-146 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 519 e-145 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 519 e-145 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 518 e-145 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 518 e-145 UniRef50_A8FYM5 Signal transduction protein containing a membran... 518 e-145 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 517 e-145 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 517 e-145 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 517 e-145 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 516 e-145 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 516 e-145 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 516 e-144 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 515 e-144 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 515 e-144 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 514 e-144 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 514 e-144 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 514 e-144 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 513 e-144 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 512 e-143 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 511 e-143 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 511 e-143 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 511 e-143 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 511 e-143 UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domai... 510 e-143 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-143 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 509 e-142 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 509 e-142 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 509 e-142 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 509 e-142 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 509 e-142 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 507 e-142 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 507 e-142 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 506 e-142 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 505 e-141 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 505 e-141 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 505 e-141 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 505 e-141 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 504 e-141 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 504 e-141 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 504 e-141 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 503 e-141 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 503 e-141 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 503 e-141 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 503 e-141 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 502 e-140 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 502 e-140 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 501 e-140 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 501 e-140 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 500 e-140 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 500 e-140 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 500 e-140 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 500 e-140 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 500 e-140 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 500 e-140 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 500 e-140 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 500 e-140 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 500 e-140 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 500 e-140 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 499 e-140 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 499 e-139 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-139 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 498 e-139 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 498 e-139 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 498 e-139 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 497 e-139 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 497 e-139 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 497 e-139 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 497 e-139 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 497 e-139 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 496 e-139 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-138 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 496 e-138 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 495 e-138 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 495 e-138 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-138 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 495 e-138 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 495 e-138 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 494 e-138 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 494 e-138 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 494 e-138 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 494 e-138 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 493 e-138 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 493 e-138 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 493 e-138 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-137 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 492 e-137 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-137 UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillu... 492 e-137 UniRef50_C1DB08 Predicted signal transduction protein containing... 492 e-137 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 492 e-137 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-137 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-137 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 491 e-137 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 491 e-137 UniRef50_C0QA93 Signal transduction family protein (GGDEF domain... 491 e-137 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 490 e-137 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 490 e-137 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 490 e-137 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 490 e-137 UniRef50_Q2SF23 Predicted signal transduction protein containing... 490 e-137 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 489 e-136 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 489 e-136 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 489 e-136 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-136 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 488 e-136 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 488 e-136 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 487 e-136 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 487 e-136 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 487 e-136 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 487 e-136 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 487 e-136 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 487 e-136 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 486 e-136 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 486 e-135 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 485 e-135 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 485 e-135 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 485 e-135 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 485 e-135 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 485 e-135 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 485 e-135 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 485 e-135 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 484 e-135 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 484 e-135 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 484 e-135 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 484 e-135 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 483 e-135 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 483 e-135 UniRef50_B8GNC0 Signal transduction protein containing a membran... 483 e-135 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 483 e-135 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 482 e-134 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 482 e-134 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 482 e-134 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 482 e-134 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 481 e-134 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 481 e-134 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 481 e-134 UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 481 e-134 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 481 e-134 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 481 e-134 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 481 e-134 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 481 e-134 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 481 e-134 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 480 e-134 UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter... 480 e-134 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 480 e-134 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 480 e-134 UniRef50_C6P3U3 Response regulator receiver modulated diguanylat... 479 e-134 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 479 e-134 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 479 e-134 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 479 e-133 UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromob... 479 e-133 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 479 e-133 UniRef50_Q0KC83 Predicted signal transduction protein containing... 479 e-133 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 479 e-133 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 479 e-133 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 478 e-133 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 478 e-133 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 478 e-133 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 478 e-133 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 478 e-133 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 478 e-133 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 478 e-133 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 478 e-133 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 477 e-133 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 477 e-133 UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/P... 477 e-133 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 477 e-133 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 477 e-133 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 477 e-133 UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/P... 476 e-133 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 476 e-133 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 476 e-133 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 476 e-133 Sequences not found previously or not previously below threshold: UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 481 e-134 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 479 e-134 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 479 e-134 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 478 e-133 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 476 e-133 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 109/491 (22%), Positives = 196/491 (39%), Gaps = 47/491 (9%) Query: 42 DTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNN 101 +S AN ++ + + +R ++Y + N Sbjct: 482 AQLASIALDNANLYQAAQQELAER----------KRIEEILRYLAYHDSLTELPNRTLFN 531 Query: 102 VPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG--------IIRYMVAMGTAHYV 153 +L + D ++ + R+ + + Sbjct: 532 DRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTI 591 Query: 154 VMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGII 213 I F ++ + +A+I+ + +I + E I Sbjct: 592 ARIGGDEFTILLHNITRAENASIVAD----------KIIDTLANPWIIGNHEFHITTSIG 641 Query: 214 YDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSP 271 + P + S++ A M Q K R + + + L R Sbjct: 642 IALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTL----------RRFEL 691 Query: 272 HHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLS 331 + L+ A++ ++ ++YQP V + GKIVG EAL RW +SP FIP+A++TGL Sbjct: 692 ENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLI 751 Query: 332 EPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQI 390 P+ I+R W + +++NL + +PQ + +++ + P+ + Sbjct: 752 IPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWL 811 Query: 391 ALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFV 449 LE+TE D + + R+ G + +DDFGTGYSSL+YL+ L +DILKID+SF+ Sbjct: 812 ELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFI 871 Query: 450 DAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPK 505 L + + II + LK+K+VAEG+ET +Q +LRQ QG+L++K LP Sbjct: 872 HDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPV 931 Query: 506 EDFLR-WAEQH 515 + + + + Sbjct: 932 RELEQKYLSNN 942 >UniRef50_P77473 Uncharacterized protein ylaB n=106 Tax=Enterobacteriaceae RepID=YLAB_ECOLI Length = 516 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 516/516 (100%), Positives = 516/516 (100%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK Sbjct: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP Sbjct: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA Sbjct: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH Sbjct: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV Sbjct: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI Sbjct: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY Sbjct: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS Sbjct: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL Sbjct: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 110/491 (22%), Positives = 188/491 (38%), Gaps = 22/491 (4%) Query: 30 HQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSY 89 QV+ +++ +S V R ++ + LE +R+++Y Sbjct: 143 FDQVDEQLLQQYAHSASAVL-RNFRLMEDLRRHAAMLEEEVAER--SRAEERIRQMAYYD 199 Query: 90 RYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGT 149 N SL + D +++ + R ++A+ Sbjct: 200 SLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAK 259 Query: 150 AHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIEN 209 + + I+ + I + + T + +I T E Sbjct: 260 RLRNCCRREGDTVARQGGDEFIINLSAISDVKD-AFTVAQKIIDVFRTPFVIDGYELFIT 318 Query: 210 NGIIYDILPLPEM-NISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRR 267 I + P +++ A M K R + Sbjct: 319 TSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFAPEMNARAFE---------- 368 Query: 268 IQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQ 327 S + ++ A+E + +HYQP V++ +G+I EAL RW + P FIPLA++ Sbjct: 369 RLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEE 428 Query: 328 TGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVN 386 TGL PL ++R+ + W +++NL L + + + ++ + Sbjct: 429 TGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETGLA 488 Query: 387 PRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKID 445 P + +E+TE D + + R G I +DDFGTGYSSL YL+ V LKID Sbjct: 489 PGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKID 548 Query: 446 KSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSK 501 +SFV + + + + +I MAK L L +VAEG+ET +Q E LR Y QG+L+S+ Sbjct: 549 RSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSE 608 Query: 502 ALPKEDFLRWA 512 P E F Sbjct: 609 PAPAEQFTPVL 619 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 99/403 (24%), Positives = 171/403 (42%), Gaps = 24/403 (5%) Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 + D ++ + + A+ + D D + I+ Sbjct: 554 AFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRD----TDTVSRMGGDEFVLILPER 609 Query: 181 HNVVITSS--DEIAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-Q 236 + +++ I GI L E ++ I + P +I A M Sbjct: 610 VDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRA 669 Query: 237 KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLAN 296 K R F + + L L++A+E + +HYQP + L Sbjct: 670 KETGRNNFQFYTSSMNERALE----------RLRLEGDLRNAMERGEFILHYQPQLDLRT 719 Query: 297 GKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ- 355 GKIVG EAL RW + + P FI LA++TGL P+ +IR W Sbjct: 720 GKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGS 779 Query: 356 QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYRE 414 +S+NL + + + + + + Q+ P+ + +ELTE D + I+ + Sbjct: 780 LRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKA 839 Query: 415 AGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKL 470 G ++ +DDFGTGYSSLSYL+ +D+LKID+SFV+ + + + II +A +L+L Sbjct: 840 LGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRL 899 Query: 471 KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 ++AEG+ET +Q +L+QH QG+ +S+ + + + Sbjct: 900 TVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 108/473 (22%), Positives = 194/473 (41%), Gaps = 24/473 (5%) Query: 53 NKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHES 112 ++ A ELER + H ++ +++ Q + +++ Sbjct: 620 EILSIVAARAATELERLKADEALAEHRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVGDAE 679 Query: 113 PPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQI 172 + I D ++ S + + A+ +ID A DV+ Sbjct: 680 GHGRYLSLLFIDLDRFKNINDSLGHSIGDKLLQAVARRTG-SLIDSA---DVLARLGGDE 735 Query: 173 DAAIIGNAHNVVI--TSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITW 229 A ++ N V+ ++ + + Q + I + P +I Sbjct: 736 FAILLFNCVTPVVGADTAQRVIDALSQPFQIDDYSLHVSASIGITVAPVDAREPDELIKC 795 Query: 230 ASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHY 288 A M K R + + + + + + L+ A+ + ++Y Sbjct: 796 ADIAMFKAKDAGRNTYKFYERSMNLKT----------HELLLLENDLRHALSRDQLELYY 845 Query: 289 QPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGD 348 QP + L + IVG EAL RW + +SP FIPLA++TGL + I+RS + Sbjct: 846 QPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLAEETGLIVSMGEWILRSACRQIRT 905 Query: 349 WLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSA 406 W + Q +++N+ + + + ++ V + LE+TE D ++S Sbjct: 906 WNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTGVPTEWLELEITESLLMYDIQSSI 965 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHII 462 + R ++ G + +DDFGTGYSSLSYL+ + LKIDKSFVD L + + Sbjct: 966 ETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFVDDLLTDASDAAIAESTL 1025 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +A + L +VAEGIE +Q ++L+Q G +GQG+L S+ LP ++ + Sbjct: 1026 ALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPVAQCTQFCRER 1078 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 103/456 (22%), Positives = 193/456 (42%), Gaps = 34/456 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCS----SLEHESPPDTFPEPGKISKDGYRVWLTS 134 + M ++ RY +++ Y + P +L + ++ V Sbjct: 440 IGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLD 499 Query: 135 HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVI--------- 185 ++ + +G +++ + A + G+ + +V+ Sbjct: 500 LDNF--KKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDV 557 Query: 186 -TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQ 242 T + ++ L E I + P + ++ A M K + Sbjct: 558 ITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKN 617 Query: 243 VFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGA 302 + + + I + S L A++N++ +HYQP V L NG+I G Sbjct: 618 NYQFYSAEMNIRVFE----------RLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGV 667 Query: 303 EALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISIN 361 EAL RW + +SP FIPLA++TGL P+ ++R+ W P +++N Sbjct: 668 EALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVN 727 Query: 362 LESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIY 420 L + E + ++ +++ + P+ + LELTE + + SA I+ + G E+ Sbjct: 728 LSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVA 787 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEG 476 +DDFGTGYSSLSYL+ + LKID++F+ + + + II MA L +K +AEG Sbjct: 788 IDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEG 847 Query: 477 IETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +E ++Q ++L +H QG+ +S+ + E+ R Sbjct: 848 VELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLL 883 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 97/441 (21%), Positives = 183/441 (41%), Gaps = 20/441 (4%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +R +++ + ++ D I D ++ + Sbjct: 378 EETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHS 437 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAA-IIGNAHNVVITSSDEIAQGIIT 197 + A+ + S + A + G H + I + Sbjct: 438 IGDVLLQAVANRLICCLRKEDS----VSRLGGDEFAIFLTGVTHREAGEIAQRIITSMSE 493 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 + E I + P +I +++ A M K + + + L Sbjct: 494 SITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEEL---- 549 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 ++L + L+ A++ + +HYQP + L G+I+G EAL RW D Sbjct: 550 ------HQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGL 603 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQ 374 + P FIP+A++TGL PL ++R+ + W Q +++N+ + + Sbjct: 604 IPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIE 663 Query: 375 LLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 ++ ++ + P+ + LE+TE + + I++R + G I +DDFGTGYSSLSYL Sbjct: 664 MITSILEETGLAPQYLELEITESMALNVDYTIRILNRLKALGVSISIDDFGTGYSSLSYL 723 Query: 435 QDLDVDILKIDKSFVDALE--YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 +D LKID+SF+ L + + II MA +K+ ++AEG+ET + ++L++ + Sbjct: 724 SQFPIDRLKIDQSFLRNLNPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCN 783 Query: 493 YGQGWLYSKALPKEDFLRWAE 513 QG+ YSK LP ++ + + Sbjct: 784 EVQGYFYSKPLPTKEIDSFLQ 804 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 103/451 (22%), Positives = 182/451 (40%), Gaps = 36/451 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 E+++++Y + + + D ++ + + Sbjct: 475 EDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHV 534 Query: 139 G--------IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + V I F+ +I D I +++ Sbjct: 535 AGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKI----------AEK 584 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLP 248 I I L E I I P ++ ++ A M K + F + Sbjct: 585 ILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFS 644 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + + L + + L+ A+E + + YQP + L +G++VG EAL RW Sbjct: 645 REMNVQALEHLI----------LENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRW 694 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVL 367 D L P FIP+A++TGL P+ +++ W+ +++NL Sbjct: 695 QHPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQF 754 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGT 426 +K +L+ ++ + P Q+ LELTE + S ++ + +E G + +DDFGT Sbjct: 755 RQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGT 814 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYL++ ++ +KID+SF+ + + + II MA L LK+ AEG+E Q Sbjct: 815 GYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQ 874 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 E+L + QG+L S LP+ +F R+ Sbjct: 875 LEFLSTRNCNEIQGYLLSSPLPEAEFTRFLR 905 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 98/457 (21%), Positives = 190/457 (41%), Gaps = 45/457 (9%) Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPE--PGKISKDGYRVWLT 133 + + R S+ R +++ + + S + + + + D ++ Sbjct: 443 DVLTGLLNRKSFYTR-------LEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVND 495 Query: 134 SHND--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVI 185 + + +R + + Y+ + F ++ + D A Sbjct: 496 TLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMA---------- 545 Query: 186 TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQKGWHRQVF 244 + +I + I + E I I P ++ +++ A M Q + Sbjct: 546 KVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEENQGY 605 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + + R + L++A+++ + ++YQP+V + +IVG EA Sbjct: 606 RFFIEEMN----------RKTLERMMLENNLRNALQHDQLIIYYQPLVD-STNQIVGMEA 654 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLE 363 L RW + +SP FIPLA++TGL P+ ++R + W + ++++NL Sbjct: 655 LLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLS 714 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLD 422 + + + ++ + P + LE+TE + P+ + + R G +D Sbjct: 715 VRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSID 774 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIE 478 DFGTGYSSLSYL+ +D LKID+SFV + + + II MA+ L + VAEG+E Sbjct: 775 DFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVE 834 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +Q+++L HG H QG+ + + +P E F + Sbjct: 835 AKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQTR 871 >UniRef50_D2TLT3 Putative signal transduction protein n=2 Tax=Enterobacteriaceae RepID=D2TLT3_CITRO Length = 516 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 348/516 (67%), Positives = 415/516 (80%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 M TRHLV L +GVLILS+++PVGLSIWLA +QVE FIEELD YS+ V R +V Q K Sbjct: 1 MTTRHLVSLAAGVLILSIIVPVGLSIWLAQRQVEKKFIEELDNYSALVYERTERVVQQAK 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 ALQE+E+ C+ HL+ MRR+S+SYRY+QEV Y+++N P+CSSLE ES FP P Sbjct: 61 KALQEIEKVDVTPCTHDHLLAMRRISFSYRYVQEVLYLEDNAPRCSSLEQESHSVVFPPP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 +IS DGYR W T HNDLGI RYM A+G Y+VMIDPASFIDV+P+ +WQID AIIG Sbjct: 121 QRISADGYRAWFTKHNDLGIERYMTALGKGRYIVMIDPASFIDVVPFGAWQIDVAIIGAK 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 N VI SSD + I+ Q+T +E +G IY I P PEM ISI++WAS L W+ Sbjct: 181 QNSVIASSDALPPAILQYTQQTTPRQLERHGNIYVIRPFPEMGISIVSWASRHPLDNIWY 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 RQ IW+P G+ GLLAA+ + RILRR+QSPHHRL+DAI NR+I VHYQP+VSLA+GK+V Sbjct: 241 RQALIWIPAGIAPGLLAAVLIFRILRRLQSPHHRLRDAIHNRNIKVHYQPVVSLASGKVV 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARWPQ DG +LSPD FIPLA+QTGL+EPLT LII +VFE+MG WLRQHP+QHISI Sbjct: 301 GAEALARWPQPDGCYLSPDFFIPLAEQTGLTEPLTRLIIETVFEEMGKWLRQHPEQHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 N+ES L SEK+P LL ++N +Q+ P QIALELTEREFADPKTS+PI++RYR+AGH +Y Sbjct: 361 NIESEDLASEKLPALLSTLLNRHQIAPSQIALELTEREFADPKTSSPIVARYRKAGHAVY 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 +DDFGTGYSSLSYLQ+L+VDILKIDKSFVDALEYKNVTPHIIEMAK LKLKM+AEGIET+ Sbjct: 421 IDDFGTGYSSLSYLQNLEVDILKIDKSFVDALEYKNVTPHIIEMAKALKLKMIAEGIETA 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 KQEEWLRQHGVHYGQGWLYSKALPK +F+ WAE+ L Sbjct: 481 KQEEWLRQHGVHYGQGWLYSKALPKAEFILWAEKRL 516 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 102/412 (24%), Positives = 175/412 (42%), Gaps = 30/412 (7%) Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 +++G+ VW+ + MG V++ S A + G+ Sbjct: 499 AYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGDE 558 Query: 181 HNVVI------------TSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISII 227 +V+ I + ++ L E + + + P +++ Sbjct: 559 FVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLL 618 Query: 228 TWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICV 286 A M + K R F + + L L+ AIE ++ + Sbjct: 619 AHADVAMYRSKELGRNNFQFYTPAMNDQALE----------RLRIEGELRHAIELNELVL 668 Query: 287 HYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDM 346 HYQP V L G IVG EAL RW + P SFI LA++TGL P+ ++++ Sbjct: 669 HYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQA 728 Query: 347 GDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKT 404 W Q I++NL + T + + ++D + + R + +ELTE D + Sbjct: 729 KAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIER 788 Query: 405 SAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPH 460 + + + G ++ +DDFGTG+SSL+YL+ +D LKID+SFV + + ++ Sbjct: 789 NILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSS 848 Query: 461 IIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 II +A LKL ++AEG+ET+ Q + LR G + QG+ + K LP + Sbjct: 849 IISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLL 900 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 531 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 108/453 (23%), Positives = 178/453 (39%), Gaps = 36/453 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 ++ S +L + I D ++ S Sbjct: 523 EEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHD 582 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 + R + + V F+ V+ + DAA + + Sbjct: 583 MGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAA----------KVARK 632 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLP 248 I + Q E + + + P + ++ A M K R F + Sbjct: 633 IQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYT 692 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 L +LA + L+ A+E + VHYQP V L +G+I G EAL RW Sbjct: 693 GDLNDIVLA----------RLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRW 742 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 + ++SP SFIPLA++TGL + ++R+ W P +++NL Sbjct: 743 QSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQF 802 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 E + + + + PR I LE+ E D + ++ +E G ++ +DDFGT Sbjct: 803 RQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGT 862 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYL+ D++KID+SFV + + +I +A TL L++VAEGIET Q Sbjct: 863 GYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQ 922 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +LR QG+ +S+ +P +F + Sbjct: 923 LGYLRGLACDEMQGFYFSRPVPAAEFEQMLRDQ 955 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 94/448 (20%), Positives = 176/448 (39%), Gaps = 24/448 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + +++ L ++ + D +++ S Sbjct: 319 EQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLG 378 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQG 194 + A+ + + +D + ++ H+V VI ++++ Sbjct: 379 HDAGDILLKAIAMR----LTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIFVANKLLAT 434 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLV 252 + L + I I P + ++ A M K + + G+ Sbjct: 435 LSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNNCQFYTKGMN 494 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + + + L+ AIE + ++YQP + L G + G EAL RW + Sbjct: 495 ATAVNYLL----------LENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPE 544 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEK 371 +SP FIPLA++TGL P+ ++R + WL +++NL + Sbjct: 545 RGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKN 604 Query: 372 IPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 P + ++ + + + LE+TE + +++ + G + +DDFGTGYSS Sbjct: 605 FPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSS 664 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YLQ + LKID+SF+ + + II +A ++L++VAEG+ET Q EWL Sbjct: 665 LAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWL 724 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 R G QG+LY+K + + Sbjct: 725 RAKGCDQVQGFLYAKPMTAKQLESHFHN 752 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 95/441 (21%), Positives = 182/441 (41%), Gaps = 24/441 (5%) Query: 84 RVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRY 143 +++Y + ++ + D ++ S + Sbjct: 525 QLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQL 584 Query: 144 MVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGIITRLQK 201 + +G ++D D + +I + + V + +I + + Q Sbjct: 585 LRLVGNR----LLDCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQI 640 Query: 202 TPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAM 259 E ++ I + P + ++ A M Q K R + L + Sbjct: 641 DDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNM------ 694 Query: 260 FVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPD 319 ++ A+E + + YQP + L +G I G EAL RW D + P+ Sbjct: 695 ----RATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPN 750 Query: 320 SFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRD 378 +FIP+A++TGL PL ++ W ++ P +++N+ + + + Sbjct: 751 NFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEK 810 Query: 379 MINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDL 437 ++ ++P + LELTE +P+ + + + ++ G + +DDFGTGYSSLS+L+ Sbjct: 811 ILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHF 870 Query: 438 DVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHY 493 +D LKID+SFV + II +A ++KL +VAEGIE S+Q E++ Q Sbjct: 871 PIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDT 930 Query: 494 GQGWLYSKALPKEDFLRWAEQ 514 QG+ S+ + E+F + ++ Sbjct: 931 MQGYYLSRPVTAEEFGTFLKR 951 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 526 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 100/445 (22%), Positives = 185/445 (41%), Gaps = 24/445 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ + + +L I DG++ S Sbjct: 598 EQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSV 657 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGIIT 197 R + + + A D + ++ + +I + + I Sbjct: 658 GDRLLSVVADR----LARCARASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISE 713 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 + E + + P + +++ A M K R F + + + Sbjct: 714 PVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNVSA 773 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 A + + R LRR + + +HYQP V + G++VG EAL RW + Sbjct: 774 GARLNLERRLRRALR----------DNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGL 823 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQ 374 + P FIP+A+++GL PL+ ++R W + P +S+NL + I + Sbjct: 824 IPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAK 883 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 L+ ++ ++P+ + LELTE + + + +++ G + +DDFGTGYSSLSY Sbjct: 884 LVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSY 943 Query: 434 LQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ VD LKID+SFV + + + +T II +A +L L+++AEG+ETS Q ++L++ Sbjct: 944 LKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKER 1003 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQ 514 QG+ ++K LP ++ Sbjct: 1004 ACDEMQGYFFAKPLPHHAIPGMLQR 1028 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 107/454 (23%), Positives = 182/454 (40%), Gaps = 49/454 (10%) Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 + R +S R +A N C+ + + D ++ + Sbjct: 429 DPLTGLPNRSLFSDRLKMALAQSKRNNEMCALI-------------ILDLDNFKAINDTL 475 Query: 136 NDLGIIRYMVA--------MGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS 187 + + V I FI + P N + Sbjct: 476 GHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDI----------NDATRA 525 Query: 188 SDEIAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFI 245 +D I + E+ + I P +I A T + K R + Sbjct: 526 ADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGRNNYQ 585 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 + +L + + L+ AIE + + YQP + + GKIVG EAL Sbjct: 586 LYTESMNQKVL----------QRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEAL 635 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLES 364 RW D + P FIP+A+ +GL + ++ + W+ + H IS+NL + Sbjct: 636 LRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSA 695 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDD 423 I +++ + + + P + LE+TE D + ++++ R+ G + LDD Sbjct: 696 RQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDD 755 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSL+YL+ L +D LKIDKSFV + + + + +I +A L L +VAEG+ET Sbjct: 756 FGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVET 815 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +Q +L++ QG+L+SK LP E+ + Sbjct: 816 KEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 100/446 (22%), Positives = 185/446 (41%), Gaps = 24/446 (5%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 ++ ++ +L T I D +++ + Sbjct: 680 SEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGH 739 Query: 138 LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGI 195 + + + D + ++ + + + T + +I + Sbjct: 740 QTGDMLLQEAAKRLKECLRE----TDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATL 795 Query: 196 ITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVI 253 E + I + P ++ S++ A M K + F + Sbjct: 796 AQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANT 855 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 + + + + L+ A+E + +HYQP V L + KI+GAEA+ RW + Sbjct: 856 NSVE----------LLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPEL 905 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKI 372 LSP FIPLA++TGL + I+R +W + +++NL + E + Sbjct: 906 GMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETL 965 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 Q + D + + P + LE+TE + + + ++ + + G + +DDFGTGYSS Sbjct: 966 RQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSF 1025 Query: 432 SYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 YL+ +D LKID+SFV + +T II MA +L++K+VAEG+ET +Q +L+ Sbjct: 1026 GYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLK 1085 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAE 513 + G QG+L+S+ L DF+R + Sbjct: 1086 KQGCDQIQGFLFSEPLHSHDFVRMLK 1111 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 104/445 (23%), Positives = 189/445 (42%), Gaps = 21/445 (4%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 + ++ + N +L + D ++ + Sbjct: 716 EERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHFKDINDTLGHS 775 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 + ++ + + D + V + + G N + ++ + + Sbjct: 776 IGDQLLMDVAKRLKETLRDEDT---VSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQA 832 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLL 256 Q E + I I P N ++ A T M + K R F + + Sbjct: 833 FQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFCFFTSEMQAH-- 890 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 R + L+ A+ + +HYQP +S +G +VGAEAL RW + + Sbjct: 891 --------SARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSI 942 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQL 375 SP FIP+A+ G P+ ++R+ + + DW+ P +++NL + + +L Sbjct: 943 SPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMEL 1002 Query: 376 LRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + +++ +V R + LELTE DP+ + ++ + G ++ +DDFGTGYSSLSYL Sbjct: 1003 VTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYL 1062 Query: 435 QDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + V LKID+SFV + + II MA +L ++ +AEG+ET+ Q +LR G Sbjct: 1063 KRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQG 1122 Query: 491 VHYGQGWLYSKALPKEDFLRWAEQH 515 + QG+ +SK LP E F+ + ++ Sbjct: 1123 CNEVQGYYFSKPLPAEQFVSYLQKQ 1147 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 109/438 (24%), Positives = 184/438 (42%), Gaps = 18/438 (4%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++R ++Y N S+E S + I D +++ S Sbjct: 376 EKIRYLAYHDELTDLPNRRKFNQVLHQSIEKSSQDSSSFAVMVIDIDRFKMINDSLGHSY 435 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 ++ + + I + + I + + +D+I + + Sbjct: 436 GDIFLQGVSDRISKSAKGYHATIARMGGDEFTILCETGADGREAA-SLADKIIEALKQPF 494 Query: 200 QKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLA 257 E + I I P + ++++ A T M + K + ++ LL Sbjct: 495 TLKDSEFYISASIGTAIFPDHGTDAVALLKKADTAMYEVKKQGKNGHLFYTTDFDAQLLE 554 Query: 258 AMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLS 317 L+ AIE +++ V+YQP + +++G EAL RW LS Sbjct: 555 N----------IEIERDLRKAIERKELVVYYQPQFHSESNRMIGVEALVRWNHPTKGMLS 604 Query: 318 PDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLL 376 P FIP+A++TGL + ++R M W + +S+NL S + Q + Sbjct: 605 PGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQFHQRNLVQYI 664 Query: 377 RDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 ++++ ++ P + LE+TE DP S I+ + G I LDDFGTGYSSLSYL+ Sbjct: 665 KNILEETKLAPHFLELEITESMMMDPAVSISILHELNKIGTRISLDDFGTGYSSLSYLKK 724 Query: 437 LDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 + LKID+SF+ L K + II MAK LKL ++AEGIET Q + L ++ Sbjct: 725 FPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCK 784 Query: 493 YGQGWLYSKALPKEDFLR 510 QG+ YS+ L + + Sbjct: 785 EIQGYYYSRPLSANEVEQ 802 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 523 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 96/448 (21%), Positives = 185/448 (41%), Gaps = 24/448 (5%) Query: 75 SEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS 134 S A ++M ++ ++ + + D ++ S Sbjct: 383 SRAMALKMAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDS 442 Query: 135 HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIA 192 + + + V + D D + ++ ++++ Sbjct: 443 LGHAVGDQLLQQVAERLIVCIRD----TDTVCRQGGDEFVILLAEIEQARDAAPIAEKLL 498 Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLG 250 E + I I P M+ +++ A T M K R + + Sbjct: 499 AAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTE 558 Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 + + R L+ A+ + ++YQP + LA+G ++G+EAL RW Sbjct: 559 MNTRAV----------RRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQD 608 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTS 369 + + P F+P+A+++GL P+ ++R + W +S+N+ + Sbjct: 609 PEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRH 668 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGY 428 + + + ++ + P + LELTE D ++SA ++ + G ++ +DDFGTGY Sbjct: 669 KDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGY 728 Query: 429 SSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLSYL+ ++ LKID+SFV + + ++ +I M K LK ++VAEG+ET +Q Sbjct: 729 SSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLA 788 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +LR GQG+L+ + LP ++F R Sbjct: 789 FLRTLHCDEGQGFLFGRPLPADEFARLL 816 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 102/442 (23%), Positives = 179/442 (40%), Gaps = 20/442 (4%) Query: 81 EMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGI 140 E+ +++ L + + D +++ + Sbjct: 429 ELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTG 488 Query: 141 IRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQ 200 + + V+ + I + + I I + ++ +++I + Sbjct: 489 DMLLKEVADRLRGVVRKADT-ISRLGGDEFTIIIDEIATPADSLL-VAEKILHVFSAPFR 546 Query: 201 KTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAA 258 E + + P ++ A T M K R + + + Sbjct: 547 LEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNS----- 601 Query: 259 MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP 318 + S L+ A+ + +HYQP V+ G+IVG EAL RW Q + P Sbjct: 602 -----RVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILP 656 Query: 319 DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLR 377 D+FIPLA++TGL P+ ++R+ W Q IS+N+ T + +P +R Sbjct: 657 DAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIR 716 Query: 378 DMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 ++ + P + LE+TE +P+ + +++ +E G I +DDFGTGYSSLS L+ Sbjct: 717 GILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKR 776 Query: 437 LDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 L DILKIDKSFV + + + II + + L +VAEG+E +Q +L + Sbjct: 777 LPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQ 836 Query: 493 YGQGWLYSKALPKEDFLRWAEQ 514 QG+ +SK LP E + Sbjct: 837 EVQGYYFSKPLPAETLQPLLKN 858 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 520 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 103/419 (24%), Positives = 188/419 (44%), Gaps = 28/419 (6%) Query: 112 SPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQ 171 + ++DG+ V + + ++G A ++ + Sbjct: 669 LNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGD 728 Query: 172 IDAAIIGNAHNVVITS----------SDEIAQGIITRLQKTPGEHIENNGIIYDILPLPE 221 A + G+ VV++ + ++ + + + E + I + P Sbjct: 729 TVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDG 788 Query: 222 MNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAI 279 +++ A M K R F + + +L + L+ A+ Sbjct: 789 EAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILE----------RLELENSLRRAL 838 Query: 280 ENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLII 339 EN ++ +HYQP VSL +G+++GAEAL RW +SP FIPLA++TGL P+ ++ Sbjct: 839 ENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVV 898 Query: 340 RSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTERE 398 + WL PQ +++N+ + E++ +L + +++ P Q+ +E+TE Sbjct: 899 DHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESA 958 Query: 399 FA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----E 453 +P+ + + + G I LDDFGTGY SL+YL+ +D +KID+ FV L E Sbjct: 959 VMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAE 1018 Query: 454 YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + I+ +A +L ++AEG+E Q ++LR+HG QG+L+S+ LP +F R Sbjct: 1019 DAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLL 1077 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 114/526 (21%), Positives = 209/526 (39%), Gaps = 26/526 (4%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 ++ RH L++ +L V+L +G + ++ L S + I + Sbjct: 112 LKPRHFWMLLTFMLGCVVMLGLGTLNGWRTGITSGTELDRLTDSVSILLINGFLIWFLTY 171 Query: 61 DALQELERWQGAACS-EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPE 119 D L R + A + ++ + I N ++ + Sbjct: 172 DMQNALVRLRAQIARFHASEKNLTYLAQHDGLTRLPNRILGNELLTEAMRVAAEEKNLVA 231 Query: 120 PGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN 179 + D ++ S ++V + + + D++ + Sbjct: 232 MLFVDLDNFKDVNDSLGHSAGDDFLVQVAQR----LRESVRQSDIVCRQGGDEFLIGLTG 287 Query: 180 AH--NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ 236 + V S +I Q + Q E + + I + P + ++ A M Sbjct: 288 LQHPDAVAKVSQDILQKMQAPFQLRGIEVLASCSIGIALYPQHGNSFDELMRHADLAMYH 347 Query: 237 -KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLA 295 K R F + + + + L+ A+ + +HYQP+ L Sbjct: 348 AKEAGRNTFRFFSEDIRSSVTES----------LHLISSLRQAVTQEEFVLHYQPVYDLH 397 Query: 296 NGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP- 354 +G+++GAEAL RW +SP FI LA+++GL + ++ M W +Q Sbjct: 398 SGRLLGAEALVRWQNPKLGMVSPGLFITLAEKSGLIVDIGQWVLTEACRQMQAWRQQGAT 457 Query: 355 QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYR 413 +S+NL + + ++ + ++PRQ+ LE+TE D + + R + Sbjct: 458 DLFVSVNLSPVQFSRGNVEAVIAQALRETGLDPRQLELEVTESTLIHDTEKFITTLGRIQ 517 Query: 414 EAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLK 469 +G + +DDFGTGYS+LSYLQ V LKID+SFV L + + II +AK+L+ Sbjct: 518 HSGIRMSIDDFGTGYSNLSYLQRFPVHKLKIDQSFVRRLMQGQKDVAMVSAIIHLAKSLQ 577 Query: 470 LKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR-WAEQ 514 L + AEG+E E L + G QG+L+++ +P +DF W + Sbjct: 578 LTVTAEGVENEATREALTRMGCDQAQGYLFARPMPAKDFEAYWLAR 623 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 104/446 (23%), Positives = 174/446 (39%), Gaps = 23/446 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ +++ S+L + D ++ S Sbjct: 654 EAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVLFLDLDNFKTVNDSLG 713 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQG 194 R + A+ + + SF A++ + ++ Sbjct: 714 HPVGDRLLAAVAQRLAHCLREEDSF----ARLGGDEFVALLPRVTRAEDAAAVARKMLDA 769 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLV 252 + T + E + I + P ++ +++ A T M K R F + + Sbjct: 770 LATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMN 829 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 L + L+ AIE ++ +HYQP V+ + + G EAL RW D Sbjct: 830 TRALE----------RLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPD 879 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKI 372 + P FIP+A+ +GL PL ++R W R + +N+ + Sbjct: 880 FGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRADF 939 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSL 431 + ++ NP +I LE+TE D + + G + LDDFGTGYSSL Sbjct: 940 VDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSL 999 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 +YL+ L + LKID+SFV L E VT + +A+ L L++VAEG+ET Q ++L Sbjct: 1000 AYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLV 1059 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAE 513 G H QG+LYS+ L F W + Sbjct: 1060 ARGCHTLQGYLYSRPLDVAAFEAWMQ 1085 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 99/450 (22%), Positives = 185/450 (41%), Gaps = 24/450 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +++ ++ + ++E I D ++ + Sbjct: 145 QSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLG 204 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 + ++ M + D++ ++ +H+ + +I Sbjct: 205 HDAGDQLLITMANRFRTCL----RTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSA 260 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLV 252 I L E I + P + +++ A M K + + + L Sbjct: 261 AIQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLK 320 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + L + L+ A+E + +HYQ +L GKI G EAL RW + Sbjct: 321 VRSLE----------RLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPE 370 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEK 371 +SP FIPLA++TGL L ++R+ W +Q P I++NL + + Sbjct: 371 LGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDN 430 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + + + + + P + +E+TE D + + I++ + G + +DDFG GYSS Sbjct: 431 LINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSS 490 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L++++ +D LK+D SF+ + E + +T II M KTL L ++AEG+ET +QE +L Sbjct: 491 LAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFL 550 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 R QG+ +SK + E+F R+ H+ Sbjct: 551 RDSACDQTQGYYFSKPVSPEEFTRFMLAHM 580 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 104/476 (21%), Positives = 193/476 (40%), Gaps = 21/476 (4%) Query: 49 AIRANKVAT-QGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSS 107 RA V E+ER + + + Y + Sbjct: 422 LERAKDVLAIMAARVSAEIEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHA 481 Query: 108 LEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPY 167 + S I D ++ S R + + + I + + Sbjct: 482 ISMASLGQHQVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARR-LRLCIGGLDTVARLSG 540 Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SI 226 + I + N NV++ + E+ + + + + I + P ++ S+ Sbjct: 541 DEFAIILDQLNNIENVIL-IAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSL 599 Query: 227 ITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 + A M K R + + GL + + L+ A++ + Sbjct: 600 LKCADAAMFKAKELGRDNYRFYTAGLN----------ERASELLALEGALRQAVDKNHLV 649 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 V++QP V LA+ +I+GAEAL RW + +SP FIP+A++TGL + ++R Sbjct: 650 VYFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQ 709 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPK 403 W P IS+N+ + + + ++R ++ ++P + LE+TE D Sbjct: 710 ARQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVD 769 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTP 459 + + G ++ +DDFGTGYSSL+YL+ + LKID+SFV + + Sbjct: 770 GAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIAT 829 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +I++A+ + L ++AEGIE Q ++L G YGQG+L+S+ +P +F + + Sbjct: 830 AVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLVRQ 885 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 95/446 (21%), Positives = 172/446 (38%), Gaps = 24/446 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ V+ + + F I D ++ S Sbjct: 351 EKTQHLQFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLG 410 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQG 194 + + + + D + II + + V T + Sbjct: 411 HEIGDQLLQEVAKRLSTSIRK----TDTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDT 466 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEM-NISIITWASTKMLQ-KGWHRQVFIWLPLGLV 252 I+ E + I P ++ +A M Q KG + + Sbjct: 467 ILPSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMN 526 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + L+ A+ ++YQP + +G++VG EAL RW Sbjct: 527 S----------RAKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQ 576 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEK 371 +SP+ FIPLA++TG+ + +++ W +++N+ Sbjct: 577 MGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPG 636 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 +++ ++ + P + LE+TE D ++ I+ + + G + +DDFGTGYSS Sbjct: 637 FLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSS 696 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 LSYL+ + LKID+SFV + ++T +I +A ++ LK+VAEGIET +Q +L Sbjct: 697 LSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFL 756 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWA 512 ++ G GQG+LYS + KE F + Sbjct: 757 KEKGCEVGQGYLYSPPVAKEPFDHFF 782 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 103/409 (25%), Positives = 186/409 (45%), Gaps = 23/409 (5%) Query: 116 TFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAA 175 + D ++ S + ++ + + + +D + Sbjct: 551 QPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIRE----VDTVSRLGGDEFIM 606 Query: 176 IIGNAH-NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTK 233 + N N + + + Q I E I I P + +++ A T Sbjct: 607 LFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETA 666 Query: 234 MLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 M + K R F ++ + + R + L+ A++ ++ ++YQP + Sbjct: 667 MYRVKNDSRNGFHFVTPEMQLS----------ASRNLQLENALRHALKRNELQLYYQPQI 716 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 S +NG+I+GAEAL RW + +SP FIP+A+ +G + ++R+ +W+ Sbjct: 717 STSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDD 776 Query: 353 HP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIIS 410 I++NL + + L+ D++ Q+ + LELTE DP++ +++ Sbjct: 777 GFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMN 836 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAK 466 + E G + +DDFGTGYSSLSYL+ V LKID+SF+ + + + + II+MA Sbjct: 837 TFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMAS 896 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 L L+ +AEG+ET++Q +LR HG H QG+ +SK LP +F ++ H Sbjct: 897 NLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQFRHNH 945 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 101/445 (22%), Positives = 179/445 (40%), Gaps = 25/445 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 + +++ Q + + ++LE T I D +++ + Sbjct: 614 EEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHP 673 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA--HNVVITSSDEIAQGII 196 + + + DVI ++ N N + ++ Sbjct: 674 VGDLLLQQVAERFKRALRKE----DVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFY 729 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIG 254 + E + + I + P ++ ++ A + M K R F + + Sbjct: 730 EPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMN-- 787 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + + L+ A+E + +HYQP NG+I+G EAL RW D Sbjct: 788 --------QYAQERLELELDLRKALERDEFVLHYQPQFD-PNGRIIGCEALIRWQHPDKG 838 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 LSP FI +A+ TGL P+ +I + WL Q P +IS+NL + Sbjct: 839 LLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLL 898 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + +++ I + P + LELTE + + + ++ G + +DDFGTGYSS+S Sbjct: 899 ETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMS 958 Query: 433 YLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 L+ V+ LKID+SFV L + II MA L L ++AEG+ET +Q E+L+ Sbjct: 959 CLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKS 1018 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAE 513 QG+ +S+ + D ++ + Sbjct: 1019 SRCEEFQGYYFSRPILAADIEQYLQ 1043 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 108/449 (24%), Positives = 190/449 (42%), Gaps = 27/449 (6%) Query: 77 AHLMEMRRVSYSYRYIQEVAY--IDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS 134 A E++R+++ + + + +SL D ++ + Sbjct: 561 AAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRG--QLAVMFFDLDHFKNINDT 618 Query: 135 HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH-NVVITSSDEIAQ 193 R +V + V+ D + ++ + + ++ + Sbjct: 619 LGHDFGDRLLVEVARRLESVLRGG----DTVCRLGGDEFVFLLPDTDAEGAARVAAKLLE 674 Query: 194 GIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGL 251 + L E I + P + ++ A M Q K R F + + Sbjct: 675 AVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAM 734 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 R + L+ A++ +HYQP VSLA+G++VGAEAL RW Sbjct: 735 QA----------RSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHP 784 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSE 370 + +SP F+P+A+ GL + ++R WL + P +++NL + + Sbjct: 785 EFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNP 844 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYS 429 +P+L+ +I + P Q+ LELTE DP+++ ++ G + +DDFGTGYS Sbjct: 845 NLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYS 904 Query: 430 SLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL YL+ V LKID+SFV + + II +A +L + VAEG+ET Q ++ Sbjct: 905 SLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDF 964 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 LRQ G QG+ +S+ LP E F+ + ++ Sbjct: 965 LRQQGCDTVQGYYFSRPLPAEAFVGYLQE 993 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 112/447 (25%), Positives = 186/447 (41%), Gaps = 24/447 (5%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 H E++ + ++ H + D ++ S Sbjct: 267 HEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGH 326 Query: 138 LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGI 195 + + + D + ++ + + + + + Sbjct: 327 QVGDELLKITAQRLTSCLRES----DTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEV 382 Query: 196 ITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVI 253 + E I + P + +++ A + M K R F + + Sbjct: 383 SQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKELGRNNFQYFSAEMNS 442 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 + +RL+ AI N D +HYQP VSLA+ +I+GAEAL RW Sbjct: 443 SVTD----------RLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHS 492 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKI 372 +SP SFIPLA++TGL PL ++R+ W P IS+NL L I Sbjct: 493 GMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDI 552 Query: 373 PQLLRDMINHYQVNPRQIALELTEREF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 +++ ++ + + + LE+TE D + S ++++ R G +I LDDFGTGYSSL Sbjct: 553 VEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSL 612 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 SYL+ VD LKID+SFV + + + II + + L L ++AEGIET Q ++L Sbjct: 613 SYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLL 672 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +G GQG+L SK +P ++F+ Q Sbjct: 673 ANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 96/459 (20%), Positives = 174/459 (37%), Gaps = 41/459 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ ++Y ++ + + D ++ S Sbjct: 435 EERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHG 494 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + V + F ++P + V ++ Sbjct: 495 VGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPEL----------DHLEDVAKLAER 544 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLP 248 + + E I + P + ++I A T M K R + Sbjct: 545 VIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYT 604 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + + L+ A+ + + YQ V +G++ G EAL RW Sbjct: 605 AAMNARSFE----------RLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRW 654 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 + +SP FIPLA+ G+ + ++R+ W+ P I++N+ + Sbjct: 655 HHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQF 714 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGT 426 +P+++ + + P+ + LELTE ++ R G I +DDFGT Sbjct: 715 VETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGT 774 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL---------EYKNVTPHIIEMAKTLKLKMVAEGI 477 GYSSLSYL+ + +D LK+D+SFV+ + + + II +A LKLK +AEG+ Sbjct: 775 GYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGV 834 Query: 478 ETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 ET +Q E+LR G QG+L S+ + ED + +++L Sbjct: 835 ETPEQAEFLRSKGCDEVQGYLISRPVSGEDLISLFDRNL 873 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 100/494 (20%), Positives = 197/494 (39%), Gaps = 25/494 (5%) Query: 27 WLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS 86 W + + E F ++ ++ I + +G + + E+ ++ + E++ + Sbjct: 449 WNLYDKTEQFFRKDQSSFPVEYVISS---IKEGTEIVGEVITFKDVTQRKQMEEEIKYHA 505 Query: 87 YSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVA 146 Y + L + + D ++ + + Sbjct: 506 YFDSLTDLPNRVLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLRE 565 Query: 147 MGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGIITRLQKTPG 204 + + + + N + V+ + + Sbjct: 566 VANRLSACVPKS----ATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDN 621 Query: 205 EHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVL 262 E I I P ++ A T M + K + + G+ + Sbjct: 622 EIYMKTSIGISIFPDNGDTTEILVKNADTAMYKSKEISGSSYHFFSEGMDTRTFES---- 677 Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 + L A+E ++ ++YQP ++ KI G EAL RW + + PD FI Sbjct: 678 ------IKLENDLYKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFI 731 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMIN 381 P+A++TGL P+ +++ + W Q +S+NL + L + ++++++ Sbjct: 732 PIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLE 791 Query: 382 HYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 +++P+ I LELTE + +++ + + + G + +DDFGTGYSSL YL+ L + Sbjct: 792 EVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPIS 851 Query: 441 ILKIDKSFVDAL--EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 LKIDKSFV + + +T II +AK L L ++AEG+ET +Q E+L + QG+ Sbjct: 852 TLKIDKSFVQDMTKDDAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYF 911 Query: 499 YSKALPKEDFLRWA 512 +S+ + ED + Sbjct: 912 FSRPMAAEDIEKLF 925 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 516 bits (1329), Expect = e-145, Method: Composition-based stats. Identities = 98/448 (21%), Positives = 177/448 (39%), Gaps = 25/448 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + + + +LE + D ++ S Sbjct: 629 QSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLG 688 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH--NVVITSSDEIAQG 194 + + + + D + ++ N ++ + Sbjct: 689 HPSGDVLLELLARR----LSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSL 744 Query: 195 IITRLQKT-PGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGL 251 + E I + P ++ +I A M Q K R + + L Sbjct: 745 LQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSL 804 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 + R RL A+ + + +HYQ + + +G+++G EAL RW Sbjct: 805 T----------QTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSA 854 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSE 370 ++PD FIPLA++TGL PL ++R D W + +++NL L S Sbjct: 855 TEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSP 914 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYS 429 + + + ++ + ++ LELTE D + + + + G + +DDFGTGYS Sbjct: 915 DLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYS 974 Query: 430 SLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL+YL+ L +D LKID+ FV + + + II MA+ L+L ++AEG+ET +Q ++ Sbjct: 975 SLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDF 1034 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAE 513 L + G GQG+L+ + LP E F + Sbjct: 1035 LIRQGCTAGQGYLFGRPLPAEAFAQVMR 1062 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 94/446 (21%), Positives = 178/446 (39%), Gaps = 23/446 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +++++Y N +L + + D ++ + Sbjct: 263 EETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHT 322 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQGII 196 + + + + + D + ++ + +V + + +I Sbjct: 323 VGDQL---LQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFT 379 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 E + I I P + ++I A M K R + + Sbjct: 380 QVFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQ 439 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 R + + L+ A++ + ++YQP V++ G+IV EAL RW + Sbjct: 440 AF----------RRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMG 489 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIP 373 + P+ FIPLA+ TGL PL ++R+ W +P +++N ++ Sbjct: 490 LILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLT 549 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ ++ + P + LELTE + + + ++R G I +DDFGTGYSSLS Sbjct: 550 DMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLS 609 Query: 433 YLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 Y++ L + LKID+SFV + + +I MA++L+L ++AEG+ET +Q + L Sbjct: 610 YIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDG 669 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQ 514 QG+L+SK LP + Sbjct: 670 LNCPEMQGYLFSKPLPVAEMTTLLSN 695 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 99/454 (21%), Positives = 185/454 (40%), Gaps = 36/454 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + ++ +++ + D + D +++ S Sbjct: 369 EYEAKINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYVLFLDLDHFKLVNDSLG 428 Query: 137 DLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R +G V + F+ ++ V + + Sbjct: 429 HDFGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDV-----------TEREVSSMA 477 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIW 246 +EI + I E I P + S ++ A M K + F Sbjct: 478 NEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKDKGKNSFHL 537 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 L + + + + L A+ ++ +HYQP VS +G IVG EAL Sbjct: 538 YVPNL----------EQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALI 587 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESP 365 RW + L PD FI +A++TGL P+ ++R+ + W Q +++NL + Sbjct: 588 RWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSAR 647 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFG 425 + Q++ ++++ ++ P + LE+TE D + + ++ G + +DDFG Sbjct: 648 QFLKQDFTQMIAEILHQTRLAPEYLELEITESSMIDVHRATQALKELKQLGVHVAIDDFG 707 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSL YL++ ++ LKID+SFV + + + II MA L++ ++AEG+ET + Sbjct: 708 TGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKE 767 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + +L++H QG+L+S+ LP ED + + Sbjct: 768 ELAFLQEHLCEEVQGYLFSRPLPSEDVAFYLQAQ 801 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 105/455 (23%), Positives = 179/455 (39%), Gaps = 37/455 (8%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A ++ ++ + N + + DG++ S Sbjct: 204 ADEEKLETLATRDELTGLINRFSYNHLLKKEVALAKRHMESLAVLFLDLDGFKNINDSLG 263 Query: 137 DLG--------IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + + V I F+ ++P D + Sbjct: 264 HDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPRFL----------C 313 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIW 246 + I I E I + PL N+ S++ A T M Q K R + + Sbjct: 314 ERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKF 373 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + L+ AIE + YQP V L++G+I+G EAL Sbjct: 374 FTPAM----------GEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALL 423 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINLES 364 RW + +SP FI L + T L P+ ++ + W HP +++N + Sbjct: 424 RWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAA 483 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDD 423 + + + + + + LE+TE D + + + +E G I +DD Sbjct: 484 RQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDD 543 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTG+SSL+YL+ +DILKIDKSF+D ++ + I EMA +L ++++AEG+ET Sbjct: 544 FGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVET 603 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 Q E+LR HG QG+L+S+ +P E ++ Sbjct: 604 KYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQK 638 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 107/444 (24%), Positives = 187/444 (42%), Gaps = 24/444 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ + + +L T + DG++ S Sbjct: 616 EQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSV 675 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGIIT 197 R + + + + D + ++ + +IT + + I Sbjct: 676 GDRLLGVVAER----LARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAE 731 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 + E + + P + +++ A M K R F + + Sbjct: 732 PVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASA 791 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 A + + R LRR + + +HYQP V + +G+IVG EAL RW + Sbjct: 792 GARLNLERRLRRALR----------DNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGL 841 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQ 374 + P SFIPLA+++GL PL+ ++R W Q P +S+NL + V I + Sbjct: 842 VPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAK 901 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 L+ ++ + PR + LELTE + + + +++ G + +DDFGTGYSSLSY Sbjct: 902 LVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSY 961 Query: 434 LQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ VD LKID+SFV + + + +T II +A +LKL+++AEG+ETS Q ++L++ Sbjct: 962 LKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKER 1021 Query: 490 GVHYGQGWLYSKALPKEDFLRWAE 513 QG+ ++K L E Sbjct: 1022 ACDEMQGFYFAKPLSTEGISELLH 1045 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 97/418 (23%), Positives = 178/418 (42%), Gaps = 23/418 (5%) Query: 107 SLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIP 166 +++ + D ++ + +V + +++ D D + Sbjct: 894 AMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDE----DTLS 949 Query: 167 YSSWQIDAAIIGNAH-NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS 225 ++ + + +++I + + E + I + P M+ Sbjct: 950 RFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFD 1009 Query: 226 -IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 + A M K R F + + R + L+ A+ Sbjct: 1010 KLYQSADVAMYRAKQDGRNNFRFFTSEMQA----------RSARRLLLENALRQALSRNQ 1059 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 +HYQP +S+ +GKIVGAEAL RW + +SP FIP+A+++GL + ++R+ Sbjct: 1060 FELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAV 1119 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP 402 + + W P ++INL + ++ +L+ +++ + P I LELTE D Sbjct: 1120 QQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDN 1179 Query: 403 K-TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NV 457 + +++ G + +DDFGTGYSSLSYL+ V+ LKID+SFV L + Sbjct: 1180 PLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAI 1239 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 II +A ++ + +AEG+ET+ Q +LR G + QG+ +S+ L F + H Sbjct: 1240 VTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFVLGH 1297 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 185/450 (41%), Gaps = 25/450 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ ++++ + ++E I D ++ S Sbjct: 351 QSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLG 410 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN--VVITSSDEIAQG 194 ++ + M D + ++ + + + + Sbjct: 411 HPVGDELLIKLAER----MKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINL 466 Query: 195 IITRLQKT-PGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGL 251 + + E N I + P N + +I + M Q K R + + L Sbjct: 467 LTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEAL 526 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 + +RL+ A+ ++ +HYQP+V G +VG EAL RW Sbjct: 527 SVA----------ANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPP 576 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSE 370 + + P FIP+A++TGL PL ++R+ + W+ +++NL SE Sbjct: 577 GKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSE 636 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYS 429 + +++ ++ Q+ + LELTE F + + S +++ + G + +DDFGTGYS Sbjct: 637 NLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYS 696 Query: 430 SLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL YL+ +D LKID+ FV L + + II MA+ LKL ++AEGIE+ +Q + Sbjct: 697 SLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAF 756 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 LRQ Y QG+L+ + +P + W +H Sbjct: 757 LRQQDCDYYQGYLFHRPVPAIELEAWLREH 786 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 103/447 (23%), Positives = 194/447 (43%), Gaps = 21/447 (4%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +++ +++ V S+ +T I D ++ + Sbjct: 1030 ESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLG 1089 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 + ++ +G ++ D + + + + N + +++I + I Sbjct: 1090 HQVGDQLLIEVGQRILKILRDEDT---IARQGGDEFIVVLPDTGENGAVHVAEKILESIS 1146 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 +L P + I + P + ++ A T M Q K R V+ + + + Sbjct: 1147 DQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAH 1206 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 RI L+ A+ ++ ++YQP +G I+G EAL RW + Sbjct: 1207 ----------SSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEMG 1256 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIP 373 +SP FIP+A+Q+G + ++R+ + W +++NL + E +P Sbjct: 1257 PVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDLP 1316 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + + ++ V+P + LELTE +P+ ++ + G ++ +DDFGTGYSSLS Sbjct: 1317 KQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLS 1376 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ V LKID+SF+ L + +++ II ++K L LK +AEG+ET Q ++L++ Sbjct: 1377 YLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQE 1436 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 QG+ YSKAL E F + E+ Sbjct: 1437 KQCDEIQGFYYSKALTPEAFDAFYEKQ 1463 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 104/448 (23%), Positives = 185/448 (41%), Gaps = 24/448 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++R+++ + N+ +E + D ++ S Sbjct: 382 ETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLG 441 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 ++ + + D + ++ + N V + EI Sbjct: 442 HPVGDELLIEIARR----LRSRIRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDL 497 Query: 195 IITRLQK-TPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGL 251 + Q + E I + PL + + +I+ A + Q K R V+ + L Sbjct: 498 LNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNVYRFYTADL 557 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 R L+ +E + +H+QP+V+L G++VGAEAL RW Sbjct: 558 T----------RAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHP 607 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEK 371 ++P FIPLA++TGL PL ++ S +WL I++NL + + Sbjct: 608 TEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGD 667 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + +RD+++ + LE+TE D + ++ + G + +DDFGTGYSS Sbjct: 668 LTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSS 727 Query: 431 LSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ VD LKID+SFV + + ++ MA ++L ++AEG+ET++Q +L Sbjct: 728 LAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFL 787 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 R G QG+L + DFL E+ Sbjct: 788 RSLGCEAYQGYLVGRPQAAADFLGAVER 815 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 511 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 96/438 (21%), Positives = 181/438 (41%), Gaps = 23/438 (5%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYM 144 ++Y + + D ++ S R + Sbjct: 494 LAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLL 553 Query: 145 VAMGTAHYVVMIDPASFIDVIPYSSWQIDAAII-GNAHNVVITSSDEIAQGIITRLQKTP 203 ++ + + D + ++ + + ++ + T Sbjct: 554 QSVALRIQDCVREG----DTVARLGGDEFIVLLREAGESAASVVAQKLLIALATPYDLDG 609 Query: 204 GEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFV 261 I I P + ++I A M K R F + + + Sbjct: 610 QVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRVDL---- 665 Query: 262 LRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 + S L+ A+E ++ + YQP LA+G + G EAL RW +SP F Sbjct: 666 ------LFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEF 719 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMI 380 IP+A++TG + ++R+ M +W + I++NL L + +L++ ++ Sbjct: 720 IPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVL 779 Query: 381 NHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDV 439 ++ R + LE+TE D + + +S ++ G ++ +DDFGTG+SSL+YL+ + V Sbjct: 780 LETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPV 839 Query: 440 DILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQ 495 + LKID+SF+ +E + II + L L+++AEG+ET +Q ++LR G Q Sbjct: 840 NKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQ 899 Query: 496 GWLYSKALPKEDFLRWAE 513 G+ YS+ L EDF+R+ + Sbjct: 900 GYFYSRPLLAEDFMRFVK 917 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 511 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 178/453 (39%), Gaps = 36/453 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 MR ++ + + L I D +++ + Sbjct: 391 EDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQ 450 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + +V + F+ ++P S DAAI+ S + Sbjct: 451 VGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIV----------SGK 500 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISI-ITWASTKMLQ-KGWHRQVFIWLP 248 I + T ++ E + I I P + I + A T M K R + + Sbjct: 501 IISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFA 560 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + R + +L+ AI ++ + +QP + G EAL RW Sbjct: 561 ADMN----------RTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRW 610 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVL 367 +SP FIP+A++TG+ + ++ + +M W+ I++N+ + L Sbjct: 611 HHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQL 670 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + + + + + + LE+TE +P+ + I+ R G + +DDFGT Sbjct: 671 RRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGT 730 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSL+YL+ +D LKID+SFV +E + + I +A +L L ++AEG+ET Q Sbjct: 731 GYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQ 790 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 E LR +G QG+L+SK L + Sbjct: 791 HELLRANGCDEVQGFLFSKPLTGAAAFAFLHAR 823 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 103/516 (19%), Positives = 200/516 (38%), Gaps = 42/516 (8%) Query: 16 LSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACS 75 L+ L V ++ D + S+ RA A + L R++ Sbjct: 76 LAELPIVMVTALDDRDSRLRGIEAGADDFMSKPFDRAELRARV--RTITRLNRYRRLI-- 131 Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 ++ ++ + +L + + D +++ Sbjct: 132 -ETEEQLAYLANYDPLTKLPNRNLLLERLRQTLGRATRTHQDIAILALDLDNFQMINDGV 190 Query: 136 NDLG--------IIRYMVAMGT-AHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVIT 186 R + V + F+ + N V Sbjct: 191 GHDVGDKVLHEVAQRLTQTVSKIGATVARLSGDEFVVIEESD----------NLVKDVSE 240 Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKM-LQKGWHRQVF 244 + + + + E + I + P + ++ A T M K + + Sbjct: 241 MAQGLLDNLSRSMVIDHHEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGKNTY 300 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + + ++L+ + N ++ ++YQP + L++G++VG EA Sbjct: 301 QFFKAEMNKAAFE----------RLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEA 350 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLE 363 L RW + SP F+P+A++ GL P+ ++R+ + W + P +S+N+ Sbjct: 351 LLRWQHPEFGICSPVKFVPVAEEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVS 410 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSA-PIISRYREAGHEIYLD 422 S + + Q++++ + +NP + LELTE ++ +++ + G I +D Sbjct: 411 SRQFFRDNLLQIIKEALADSNLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAID 470 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIE 478 DFGTGYSSLSYL+ +D+LKID+SFV + +T II MA +L L +VAEG+E Sbjct: 471 DFGTGYSSLSYLKRFPLDVLKIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVE 530 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 T Q +L+Q QG+ +S+ + E + ++ Sbjct: 531 TQGQLTFLQQQHCDVIQGYYFSRPICSEKMTQTLQR 566 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 98/417 (23%), Positives = 177/417 (42%), Gaps = 24/417 (5%) Query: 106 SSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVI 165 ++ D ++V + + + ++ + + +F Sbjct: 457 QAVAGARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTF---- 512 Query: 166 PYSSWQIDAAIIGNAH--NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN 223 ++ N + +T ++ + E + + P Sbjct: 513 ARLGGDEFVIVLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDT 572 Query: 224 I-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIEN 281 + ++I A T M K R F + + + + + L+ A+E Sbjct: 573 MEALIKKADTAMYHIKESGRNSFQFFAEEMN----------QKVNARLTIETGLRRALEK 622 Query: 282 RDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRS 341 ++ +HYQP + G +VG EAL RW D +SP FIP+A+ +GL + ++ + Sbjct: 623 GEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLAT 682 Query: 342 VFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF- 399 +W R +S+N+ + + +I ++P + LELTE Sbjct: 683 ACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALT 742 Query: 400 ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYK 455 + + I++R RE G I +DDFGTGYSSL+YL+ VD+LKIDKSF+D + E Sbjct: 743 HNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDA 802 Query: 456 NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + II +A + +K+VAEG+ET++Q + L + QG+ +S+ LP E+F R+ Sbjct: 803 AIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFERYI 859 >UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=6 Tax=Enterobacteriaceae RepID=B5Y0R4_KLEP3 Length = 519 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 276/516 (53%), Positives = 363/516 (70%) Query: 1 MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK 60 MRTRHLV L +GVLIL+++LP+ LSIW A +Q + F ELD YS+R+ +R +VA Q + Sbjct: 1 MRTRHLVALFTGVLILAIILPISLSIWQAARQAKLQFYRELDDYSNRIVVRTLQVADQAR 60 Query: 61 DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP 120 +AL+E + A+CS HL+ +RR++Y++RYIQEV ++ ++VPQCSSLE S TFP P Sbjct: 61 EALREADSHTAASCSPEHLLTLRRIAYTHRYIQEVLWLRDSVPQCSSLEDHSVAVTFPPP 120 Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 I+ DGYR WLTS NDLG+ M AMG+ ++VMIDP SFIDV+P S +I + G Sbjct: 121 DHIAPDGYRTWLTSINDLGLNHQMTAMGSQQHMVMIDPISFIDVVPASEEKIHTMLFGLD 180 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWH 240 H ++ SS + + R++ + + +Y I +PE+ I+TW+ST LQ+ Sbjct: 181 HLKMVISSQPLPDTVWQRIKDPHVNMLTLDNTVYRIQRIPELGSGIVTWSSTLPLQQRIR 240 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 +Q+ WLP+G+ LLA +LR+LR ++SP + + DA+ + I V+YQPI+SL +GKI Sbjct: 241 QQLIFWLPVGIFTSLLATWLLLRLLRHLRSPRNSMLDALNSEAIQVYYQPIISLQDGKIA 300 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISI 360 GAEALARW Q DG++LSPD FIPLA+QTGL LT I+R +F D+G WLRQ P+ HISI Sbjct: 301 GAEALARWQQPDGTFLSPDIFIPLAEQTGLITQLTEDIVRKIFTDLGPWLRQRPEVHISI 360 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY 420 NL L S +P LL D + H+ + QI LE+TER F DP+T+ P+I+ YR+AGH I Sbjct: 361 NLSVDDLRSPTLPTLLHDQLQHWGIAAEQIILEITERGFVDPETTMPVIAHYRQAGHRIS 420 Query: 421 LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 +DDFGTGYSSLSYLQ LDVD LKIDKSFVD LEY+ +TPHIIEMAK L L VAEG+ET Sbjct: 421 IDDFGTGYSSLSYLQKLDVDTLKIDKSFVDTLEYRPLTPHIIEMAKALNLATVAEGVETE 480 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 Q +WLRQHGV Y QGWLYSKALPKE F+ WAE +L Sbjct: 481 SQRDWLRQHGVQYAQGWLYSKALPKEQFILWAENNL 516 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 97/445 (21%), Positives = 195/445 (43%), Gaps = 21/445 (4%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A ++ +Y + + ++ T + D ++ + Sbjct: 483 AAEDQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLG 542 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 R + + + D D + ++ + + V++ + +++ Sbjct: 543 HAVGDRILTTLAQRMQETLRD----TDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDL 598 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLV 252 + + E + + P + + +I +A T M K R F + + Sbjct: 599 VSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRNNFQFYTPDMN 658 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 R + L+ A++ +++ V+YQP V + +G+I+G+EAL RW + Sbjct: 659 AHAG----------RRLQLENNLRKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPE 708 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKI 372 +SP+ FIPLA++TG+ E + + + W + HP+ I++NL + +E + Sbjct: 709 HGLISPNDFIPLAEETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVNLSARQFRNENL 768 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 + ++N + R + +ELTE D + +++R + G + +DDFGTGYSSL Sbjct: 769 VDDIEQILNKTGLAARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSSL 828 Query: 432 SYLQDLDVDILKIDKSFVDAL--EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 S+L +D LKID+SFV+++ + + II + +TL L ++AEG+E ++Q + L Q Sbjct: 829 SHLNRFPIDKLKIDRSFVNSMSLDNNGIARTIITLGRTLGLSIIAEGVENNEQRQLLLQL 888 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQ 514 G QG+ +S+ + F E+ Sbjct: 889 GCPQAQGYYFSRPVHDNAFSEMLEK 913 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 98/456 (21%), Positives = 190/456 (41%), Gaps = 30/456 (6%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ ++++ ++E + D ++ + Sbjct: 260 DQILQLAHFDSLTGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTLGHSI 319 Query: 140 IIRYMVAMGTAHYVVMIDPASF--IDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQG--- 194 + + + ++ S + + + + G+ V++ +I Sbjct: 320 GDQLLQEVARRLTDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKDAEHA 379 Query: 195 -------IITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFI 245 I + + + + I I P N+ ++ A M K + + Sbjct: 380 ARRVLNSIGDIINLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKNDYE 439 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 + + + +R L+ AI+N+++ V+YQP + + G+I+GAEAL Sbjct: 440 LFVNSMNV----------VAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEAL 489 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLES 364 RW + +SP FIP+A++TGL P+ ++R + +W P+ I++N+ Sbjct: 490 LRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISV 549 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 + + +L+ ++ + + LE+TE D + + + + ++ G + +DD Sbjct: 550 QQFAKQSLDKLVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDD 609 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSLSYL+ +D LKID+SF+ + VT II MA L L ++AEG+E Sbjct: 610 FGTGYSSLSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEE 669 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + Q E+LRQH QG+ +S+ L D H Sbjct: 670 ASQLEFLRQHHCEEMQGYYFSRPLIASDMEALLRSH 705 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 92/446 (20%), Positives = 171/446 (38%), Gaps = 24/446 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + + + +L + D ++V + Sbjct: 399 EAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLDRFKVINDTLG 458 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 + + ++ D + ++ + ++ I Sbjct: 459 HTVGDFLLQGVTKR----LLGGTRESDTLARWGGDEFIILLESIRGAEDAAVAARRILDV 514 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLV 252 + E + I + P ++ +++ A M K + + + + Sbjct: 515 LAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKNDYQFYESTMS 574 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 G L L+ A++ + +HYQP V++ G IVGAEAL RW D Sbjct: 575 TGGLE----------RLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPD 624 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEK 371 L P FIPLA+++G P+ ++R+ W P +S+NL + + Sbjct: 625 RGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDN 684 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSS 430 + + ++ ++P + LE+TE + + + + E G + +DDFGTGYSS Sbjct: 685 LTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSS 744 Query: 431 LSYLQDLDVDILKIDKSFVD----ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L YL+ + LKID+SFV ++ + II + KTL LK+VAEG+ET +Q L Sbjct: 745 LGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVL 804 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWA 512 R + QG+L+S+ + + + Sbjct: 805 RNYQCDEAQGYLFSQPVDADRMTEFL 830 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 104/450 (23%), Positives = 188/450 (41%), Gaps = 25/450 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + +++ + ++E + D ++ S Sbjct: 683 QSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLG 742 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 +V + + D + ++ + N + + Sbjct: 743 HPIGDELLVMLALR----LKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDL 798 Query: 195 IITRLQKT-PGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGL 251 + T E N I + P +++ +I A M K R + + L Sbjct: 799 LATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDAL 858 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 I +L+ A+ + +HYQP++ G+++G EAL RW Sbjct: 859 SIA----------ANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPP 908 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSE 370 D + +SP FIP+A++TGL PL ++R+ W+ P +++NL SE Sbjct: 909 DKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSE 968 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYS 429 + +L+R ++ ++ + LELTE F + + S I+ + G + +DDFGTGYS Sbjct: 969 NLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYS 1028 Query: 430 SLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL+YL+ +D LKID+SFV L + + II MA+ LKL ++AEG+E+ +Q + Sbjct: 1029 SLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDI 1088 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 L QHG Y QG+L+ + +P ++ W ++ Sbjct: 1089 LNQHGCDYYQGYLFHRPVPAQELEVWFREN 1118 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 95/447 (21%), Positives = 180/447 (40%), Gaps = 21/447 (4%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++R+++ L + D ++ S Sbjct: 965 EAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLG 1024 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 ++ + + D + V + + + + ++ + + Sbjct: 1025 HRVGDALLIQVAERLRRAVRDEDT---VSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMA 1081 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 + E + + P + ++ A T M K R + + + Sbjct: 1082 PAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQ-- 1139 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 R + L+ A+EN ++ +HYQP +LA+ ++VGAEAL RW Sbjct: 1140 --------ERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLG 1191 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 +SP FIP+A++ GL P+ ++R+ + W ++ P +++NL + + Sbjct: 1192 MVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLT 1251 Query: 374 QLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ +++ + + + LELTE D + + + R G + +DDFGTGYSS+S Sbjct: 1252 DVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMS 1311 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ V LKID+SFV L E + + I +A+ L L+ +AEG+E+ Q +LR Sbjct: 1312 YLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRA 1371 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 G QG+L+S+ L F + H Sbjct: 1372 KGCDEAQGYLFSRPLAPAQFAAFVRAH 1398 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 96/443 (21%), Positives = 175/443 (39%), Gaps = 24/443 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ + +L + + D ++ S Sbjct: 203 EEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSLGHG 262 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGII 196 + + + + + +D + + ++ + + + I + I Sbjct: 263 KGDQLLKMVAER----LSERVRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAIS 318 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 E + + I + P + +++ A M K R F + L Sbjct: 319 LPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNER 378 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + + S L+ A+EN + + YQP L G++ G E L RW + Sbjct: 379 VAS----------RMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELG 428 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIP 373 + P SFIPLA++TGL + ++R+ W +++NL ++ Sbjct: 429 MVQPGSFIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELT 488 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ ++ ++PR + LE+ E D +++A +++ + G ++ +DDFGTGYSSLS Sbjct: 489 GVIAGVLRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSSLS 548 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ LKID SFV + + II MA L L +VAEG+ET Q E+LR Sbjct: 549 YLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRA 608 Query: 489 HGVHYGQGWLYSKALPKEDFLRW 511 HG + QG+ S+ LP +F Sbjct: 609 HGCNEIQGYYLSRPLPAAEFEGM 631 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 106/465 (22%), Positives = 191/465 (41%), Gaps = 38/465 (8%) Query: 66 LERWQGAACSEAH--LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKI 123 L R +E H +R ++ +L + + + Sbjct: 417 LLRGTAQDITERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFL 476 Query: 124 SKDGYRVWLTSHND--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAA 175 D ++ S R + + V FI ++ A+ Sbjct: 477 DMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQAS 536 Query: 176 IIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKM 234 + S++ + Q + + EH N I + P E ++ A + M Sbjct: 537 L----------SAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAM 586 Query: 235 L-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVS 293 K + + + + ++L A+E VHYQP + Sbjct: 587 YLAKAQGGAGYRFYTPDMNTRAME----------RLLLQNQLHQALELGQFQVHYQPQMD 636 Query: 294 LANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH 353 L +G+I G EAL RW + + P FIP+A+ TGL EPL ++R+ ++ W + Sbjct: 637 LRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRG 696 Query: 354 -PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISR 411 P ++S+NL +P ++ ++ + ++ LE+TER D + + +SR Sbjct: 697 LPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSR 756 Query: 412 YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKT 467 G + +DDFGTG+SSL+YL+ L V LKID+ FVD + + + +I + +T Sbjct: 757 IARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRT 816 Query: 468 LKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 L+L+++AEG+ET +Q +LR+HG QG+ ++ +P + W Sbjct: 817 LRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 108/463 (23%), Positives = 184/463 (39%), Gaps = 44/463 (9%) Query: 78 HLMEMRR-------VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRV 130 L ++R+ +++ + +L + D ++ Sbjct: 901 DLSQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKN 960 Query: 131 WLTSHNDLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN 182 S R + M + + + F+ V+ + + D+AI+ + Sbjct: 961 INDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARS-- 1018 Query: 183 VVITSSDEIAQGIITRLQKTPG-EHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGW 239 + + + E I I P + +I A M Q K Sbjct: 1019 --------LLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTL 1070 Query: 240 HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 R + + L R +RL+ AI + V+YQP V +A G I Sbjct: 1071 GRNTYHFYTEDL----------SRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHI 1120 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHI 358 +GAEAL RW + + P FIPLA++TGL + +++ W+ + Sbjct: 1121 IGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTL 1180 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGH 417 ++NL I L+ ++ ++ LELTE + ++ R Sbjct: 1181 AVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDI 1240 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMV 473 + +DDFGTGYSSLSYL+ +DILKIDKSFVD + + + II M L K++ Sbjct: 1241 RLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVL 1300 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 AEG+ET +Q E+L+ G QG+L S +P E+F + ++++ Sbjct: 1301 AEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKENM 1343 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 95/445 (21%), Positives = 182/445 (40%), Gaps = 24/445 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 +M ++ + N +L F + D ++ S Sbjct: 316 NKMTYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEV 375 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN--VVITSSDEIAQGIIT 197 + + + + D I ++ N ++++ Sbjct: 376 GDQLLKMVARR----LESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATV 431 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNISII-TWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 + E + I + P N ++ A M K R + + + + Sbjct: 432 PYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERV 491 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 + I +L+ A+E + ++YQP + + G++VGAEAL RW Sbjct: 492 ME----------IAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGL 541 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQ 374 ++PD FIP+A+ +GL P+ L ++R +W + +++NL + L Q Sbjct: 542 VAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQ 601 Query: 375 LLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + +++ + P + LE+TE + + + R G ++ LDDFGTGYSSLSY Sbjct: 602 EVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSY 661 Query: 434 LQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ L ++ +KIDKSF+ + + + II M+ L+L ++AEG+E Q E+L++ Sbjct: 662 LKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKE 721 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQ 514 G QG++ S+ +P ++F + Sbjct: 722 GCDQMQGFIASRPVPADEFALLLQN 746 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 111/446 (24%), Positives = 177/446 (39%), Gaps = 23/446 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ R+++ +LE I D ++ S Sbjct: 446 DSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLG 505 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG-NAHNVVITSSDEIAQGI 195 +VA+ + D + +I V + + + + + Sbjct: 506 HQAGDELLVAIAQR----LHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVV 561 Query: 196 ITRLQ-KTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLV 252 GE I + P + S +I A M K + + L Sbjct: 562 DQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESLT 621 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 R S L+ A+ + +HYQP+V LA+G+++GAE L RW Sbjct: 622 ----------RAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPG 671 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKI 372 + + P FIPLA++TGL PL ++ WL +++NL + Sbjct: 672 EALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDL 731 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 +R + + P Q+ LELTE + + + + + G + +DDFGTGYSSL Sbjct: 732 VGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSL 791 Query: 432 SYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 +YL+ +D LKID+SFV L + II M + LKL+ +AEG+ET +Q +LR Sbjct: 792 AYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLR 851 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAE 513 Q G GQG+L+S LP E F RW Sbjct: 852 QLGCDSGQGYLFSPPLPAEAFERWLR 877 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 92/451 (20%), Positives = 166/451 (36%), Gaps = 36/451 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +++ ++Y S+ + D ++ S Sbjct: 377 EADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHP 436 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R A+ V + F+ V+ + V + + Sbjct: 437 VGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGA----------HDVTHVAAK 486 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKMLQ-KGWHRQVFIWLP 248 + + E I + P +++ A T M K R F + Sbjct: 487 LLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYT 546 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + R +L+ A+ + + YQP +G + G EAL RW Sbjct: 547 DEMN----------RAATARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRW 596 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 ++P FIPLA++TG+ + ++R WL P+ IS+NL L Sbjct: 597 RHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQL 656 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGT 426 + + + + + P + LE+TE D P + ++ + G I +DDFGT Sbjct: 657 REKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGT 716 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQ 482 G+SSLSYL+ +D LKID+SF+ +E+ + + +A L L ++AEG+E++ Q Sbjct: 717 GHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQ 776 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 LR+ G QG+ +S+ + + Sbjct: 777 VARLRELGCDELQGFHFSRPVTADVVENLLR 807 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 105/457 (22%), Positives = 189/457 (41%), Gaps = 33/457 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A ++ +++ + ++ + T I D ++ ++ Sbjct: 451 AAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDNFKALNDTYG 510 Query: 137 DL--------GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + ++ V F+ ++ + + +A + T Sbjct: 511 HPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLL--EGFDEN---PLDAASQAETVG 565 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIW 246 ++I + E+ + I + + +I ++ A M Q K R V + Sbjct: 566 EQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRF 625 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + + + L+ AIEN +HYQ V + GAEAL Sbjct: 626 FDPQMQ----------ETIAKRTALEGDLRKAIENHQFQLHYQIQVD-ESRHPFGAEALI 674 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL--RQHPQQHISINLES 364 RW + +SPD FIPLA+++ L P+ ++ + + W + +S+N+ + Sbjct: 675 RWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSA 734 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDD 423 ++ +I Y++NP + LELTE D + + +S +E G + LDD Sbjct: 735 KQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDD 794 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSL YL+ L +D LKID+SFV + + + II MA +L L ++AEG+ET Sbjct: 795 FGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVET 854 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 +Q++ L G QG+L+ K +P E F + L Sbjct: 855 EEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSL 891 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 97/472 (20%), Positives = 185/472 (39%), Gaps = 24/472 (5%) Query: 55 VATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPP 114 + + + + + A ++M ++ + ++ Sbjct: 303 ILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQ 362 Query: 115 DTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDA 174 + D ++ S + + +M + D + Sbjct: 363 GKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAER----LTTCVRASDTVARQGGDEFV 418 Query: 175 AIIG--NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWAS 231 ++ + + +I + + E + I P + ++I A Sbjct: 419 ILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAETLIKHAD 478 Query: 232 TKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQP 290 M Q K R + + + +L + QS L+ A+E ++ +HYQP Sbjct: 479 IAMYQAKEKGRNNYQFFRADMNERVL----------QRQSLESSLRLALERQEFLLHYQP 528 Query: 291 IVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL 350 ++L G I G EAL RW + + P SFI +A+ GL +P+ +++ + +W+ Sbjct: 529 KMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWM 588 Query: 351 RQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPI 408 +++N+ + + + + ++PR + LELTE + + + + Sbjct: 589 VAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAV 648 Query: 409 ISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEM 464 + + AG ++ +DDFGTGYSSLSYL L VD LKID+SFV + + + II M Sbjct: 649 LHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGM 708 Query: 465 AKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 K+L L ++AEG+ET +Q LR H GQG+ +S+ + L Sbjct: 709 GKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELLNTEL 760 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 95/445 (21%), Positives = 174/445 (39%), Gaps = 24/445 (5%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 + + ++ ++L + D ++ + Sbjct: 399 NEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLGH 458 Query: 138 LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN--VVITSSDEIAQGI 195 + + + + + D + ++ + + V ++ ++ + Sbjct: 459 AVGDKLLQTVASR----LTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRV 514 Query: 196 ITRLQKTPGEHIENNGIIYDILPLPEMNISIIT-WASTKML-QKGWHRQVFIWLPLGLVI 253 + + + I P ++ A T M K + F + + Sbjct: 515 QGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNA 574 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 LA L A+ ++ +H+QP V LA+G I G EAL RW + Sbjct: 575 STLA----------RLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHEL 624 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKI 372 +SP FIP+A+++ L + ++ WL +++NL S +T I Sbjct: 625 GPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDI 684 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSL 431 +R ++ H + + LE+TE D + + G I +DDFGTGYSSL Sbjct: 685 VATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSL 744 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 SYL+ L +D+LKID+SFV L + + II M ++L L+ VAEG+E + ++L Sbjct: 745 SYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLL 804 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWA 512 HG YGQG+L+S+ +P + Sbjct: 805 DHGCQYGQGYLFSRPVPAATMEQLL 829 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 111/496 (22%), Positives = 195/496 (39%), Gaps = 38/496 (7%) Query: 36 SFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEV 95 + +++ R + + L+E + E + + +++ + Sbjct: 388 RQMGADISFALGNMAREERRLDVERALLEETTQRMNE--QELNEQRIEYLAHYDTVTKLP 445 Query: 96 AYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND--------LGIIRYMVAM 147 +LE + I D ++ S R + Sbjct: 446 NRFSLMARLGQALELAKRFSSRLAVIFIDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTI 505 Query: 148 GTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHI 207 +A V + F+ V+P + I AA + +I Q + E Sbjct: 506 RSADIVARLGGDEFVVVLPLINSNISAAH----------AVRKIQQTLSQGYTVESHELN 555 Query: 208 ENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRIL 265 I + P + ++ A M K R + + + + + Sbjct: 556 ITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRNSYQFFTQEMNLTV---------- 605 Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 + L+ A+E ++ +HYQP + L +G++VG EAL RW ++PD FIP+A Sbjct: 606 QARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFIPVA 665 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQ 384 + TGL + ++S E + W+ Q +++NL + +P LL D++ Sbjct: 666 EDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILAATG 725 Query: 385 VNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 V + LE+TE DP T+ + RE G E+ +DDFGTGYSSLSYL+ V+ LK Sbjct: 726 VAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNRLK 785 Query: 444 IDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SFV ++ + I +A L ++VAEG+ET Q +LR QG+ + Sbjct: 786 IDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGYFF 845 Query: 500 SKALPKEDFLRWAEQH 515 S+ L + + Sbjct: 846 SEPLSAAGIASYLAAN 861 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 506 bits (1303), Expect = e-142, Method: Composition-based stats. Identities = 96/447 (21%), Positives = 170/447 (38%), Gaps = 25/447 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A +R ++ L + + D ++ S Sbjct: 147 AAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVNDSLG 206 Query: 137 DLGIIRYMVAMGTA-HYVVMIDPASFIDVIPYSSWQIDA-AIIGNAHNVVITSSDEIAQG 194 + + VV ID + A+ G + + + + Sbjct: 207 HSVGDELLCEVARRLDSVVRR-----IDTLARLGGDEFIFAMPGFHTAAAVEVARRLVEV 261 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLV 252 + E + I P ++ +++ A T M K R F + + Sbjct: 262 FSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFYSSEMN 321 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 L L+ A+ + +HYQP+V+L G I+G EAL RW + Sbjct: 322 TTTLD----------RLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPE 371 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEK 371 + PD FI +A++TGL P+ ++ W P +++N+ Sbjct: 372 LGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAG 431 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 +++ + ++ ++ LELTER D + +S G E+ LDDFGTGYSS Sbjct: 432 FVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSS 491 Query: 431 LSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ V LKID+SFV+ LE + I+ M ++L++ ++AEG+E +Q L Sbjct: 492 LAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALL 551 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAE 513 R+ G QG+ +S+ + + Sbjct: 552 RKMGCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 98/475 (20%), Positives = 182/475 (38%), Gaps = 36/475 (7%) Query: 56 ATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPD 115 + + K AL A + +R + + + +L + Sbjct: 405 SQELKLALAIGLHLYMAIAQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQP 464 Query: 116 TFPEPGKISKDGYRVWLTSHND--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPY 167 + D ++V + R + + F + P+ Sbjct: 465 ELLGVAFLDLDRFKVVNDTLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPH 524 Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISI 226 + + + + I + E + + P E ++ Sbjct: 525 L----------TSTDEITKIAHRILDKLSIPFVIDNQELYVTASLGIALCPYDAEDAQTL 574 Query: 227 ITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 + A M K R F + R + L+ A+ + Sbjct: 575 LKHADAAMYRAKKQGRNNFQVFAEEM----------HREALNQLTLEADLRRALIKEEFL 624 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 ++YQP V ++ GKIVG EAL RW ++ PD FIPLA++ GL P+ ++++ Sbjct: 625 LYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIPLAEEIGLIAPIGQWVLQTACIQ 684 Query: 346 MGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPK 403 W + P I++NL + ++ ++ + +++P+ + LE+TE D + Sbjct: 685 HQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLETTEIDPQYLELEITESAAMQDVE 744 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTP 459 + + RE G I +DDFGTGYSSL+ L+ ++ LKID+SFV + + Sbjct: 745 FTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQ 804 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 I+ +++ LKLK+VAEG+ET +Q +LR QG+ + +P + + Q Sbjct: 805 TIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGYYFCPPVPAIEIAKLLRQ 859 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 103/452 (22%), Positives = 185/452 (40%), Gaps = 36/452 (7%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS----- 134 ++R+++Y SSL + I D ++ + Sbjct: 262 QKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQARRNRSPLGVCIIDIDRFKGVNDTYGYES 321 Query: 135 ---HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEI 191 R M + + F VI + + + ++ Sbjct: 322 GDALLKTVSQRLSDCMSREDVLARLGSDEFAAVIASVG----------SQDEFSVLAQKM 371 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPL 249 + +Q + + G+ + P+ ++ +++ A+T M Q K F + Sbjct: 372 LHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQAKQHGSNNFRFFSK 431 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 G+ R+ L+ A++ + + +HYQP V L G I+G EAL RW Sbjct: 432 GMN----------RMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWE 481 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT 368 + +SP FIPLA++TGL P+ ++ S W R P +++N+ + Sbjct: 482 SPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFK 541 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTG 427 L +I +NP + +ELTE + + + + G ++ +DDFGTG Sbjct: 542 QAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTG 601 Query: 428 YSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YS LSYL+ +D +K+D+SFV + + +T II MA +LK++++AEGIET +Q Sbjct: 602 YSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQL 661 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +L+ GQG+ + + +P E Q Sbjct: 662 AFLKDRACEEGQGYYFGRPVPVETAAEILAQQ 693 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 99/446 (22%), Positives = 183/446 (41%), Gaps = 21/446 (4%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +++++++ + + +L + D ++ + Sbjct: 604 EAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHS 663 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 + +V + + + S + + + G + ++ + Sbjct: 664 VGDQLLVDVSRRLKAALREEDSLSRL---GGDEFILLLPGTDEAQASQVATKLLAAVAQP 720 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLL 256 Q E + I + P + ++ A M + K R F + + Sbjct: 721 CQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDFRFFTQEMQTH-- 778 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 R + L+ A+ + +H+QP V+L +G IVGAEAL RW + + Sbjct: 779 --------SARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGMI 830 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQL 375 SP FIP+A+ +G + ++R+ + WL I++NL + + L Sbjct: 831 SPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMAL 890 Query: 376 LRDMINHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + +++ + P + LELTE DP + I+++ E G + +DDFGTGYSSLSYL Sbjct: 891 VTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSYL 950 Query: 435 QDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + V+ LKID+SFV + + II +A +L + +AEG+ET+ Q +LR G Sbjct: 951 KKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQG 1010 Query: 491 VHYGQGWLYSKALPKEDFLRWAEQHL 516 QG+ SK LPK+ F + + Sbjct: 1011 CDEVQGYYVSKPLPKDQFEAFVRNSI 1036 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 105/447 (23%), Positives = 189/447 (42%), Gaps = 23/447 (5%) Query: 75 SEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS 134 S+ +++ +++ + +L T + D ++ S Sbjct: 421 SKQAERKIQLLAHFDSLTGLPNRVLLTDRCNLALSAAQRNGTPLALLLLDLDHFKNVNDS 480 Query: 135 HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG-NAHNVVITSSDEIAQ 193 ++A+ + D + ++ ++ + Q Sbjct: 481 LGHRVGDEVLIALAGR----LKGAVREQDTVCRLGGDEFILVLPETNAAGAAHIAEMLLQ 536 Query: 194 GIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGL 251 + + P E I + P + ++ A M K R + + + Sbjct: 537 SALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEM 596 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 R + + L+ A+E + +HYQP +SLA+G++VGAEAL RW Sbjct: 597 QA----------RSERTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWSHP 646 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSE 370 + + P FIP+A+ GL P+ ++R+ + + W+ +S+NL S Sbjct: 647 ELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQFRHA 706 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYS 429 +P+L+ ++N Q+ + LELTE DP + +++ E G + +DDFGTGYS Sbjct: 707 DLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYS 766 Query: 430 SLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SLSYL+ V +KID+SFV + + K + II MA +L ++ +AEG+ET Q E+ Sbjct: 767 SLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEF 826 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWA 512 L+ G QG+ +S+ LP E F + Sbjct: 827 LKAKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 117/509 (22%), Positives = 202/509 (39%), Gaps = 47/509 (9%) Query: 25 SIWLAHQQVET-----SFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHL 79 SIW+ E + + RV R ++A D L E+ + A Sbjct: 444 SIWITMDITERKAADVALARAHEDLELRVKERTKELAKANMDLLVEINERKMA------E 497 Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL- 138 ++ ++ + ++L I D +++ + Sbjct: 498 ERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHE 557 Query: 139 -------GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEI 191 R +G V + F+ V+ + + ++I Sbjct: 558 GDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGST----------EINGVIEDI 607 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPL 249 Q ++ + I I P E + ++ A M K R + Sbjct: 608 QQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNR 667 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 L L+ S + L A++ ++YQP + + + +I+GAEAL RW Sbjct: 668 SL----------DDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWN 717 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLT 368 + +SPD+FIPLA+++GL + ++ + W +Q +S+NL + + Sbjct: 718 HPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSALQVQ 777 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTG 427 E + + D+I Y V + LELTE + + + + + G +I +DDFGTG Sbjct: 778 KESFAREVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTG 837 Query: 428 YSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSSLSYL+ +D LKID+SFV + + + II MA L L+++AEG+ET+ Q Sbjct: 838 YSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQL 897 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 E LR +G QG+L++K LP E Sbjct: 898 ELLRDYGCEQYQGYLFAKPLPVEQMTEHL 926 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 94/446 (21%), Positives = 172/446 (38%), Gaps = 23/446 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ +S N +L T + D ++ S Sbjct: 898 EERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPS 957 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH-NVVITSSDEIAQGIIT 197 + + + +V + P D + ++ N + ++ + Sbjct: 958 IGDQVVKELAER-FVAYMRPE---DTVCRQGGDEFILLLPNTDAEGAAHVAKKLLDIVAQ 1013 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 + + I P + + A + K R F + + Sbjct: 1014 PFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQM---- 1069 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 I L+ AIE+ + ++YQP KI+G EAL RW + Sbjct: 1070 ------HEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGL 1123 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQ 374 +SP FIP+A+++GL + ++R+ + + W +++NL + + Sbjct: 1124 VSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYG 1183 Query: 375 LLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + ++ +V+P + LELTE D + + ++++ G + +DDFGTGYSSLSY Sbjct: 1184 SVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSY 1243 Query: 434 LQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ +D LKID+SFV + + II MAK+L K +AEG+ET +Q +L + Sbjct: 1244 LKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIAN 1303 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQH 515 QG+ +SK LP + + Sbjct: 1304 SCDEIQGYYFSKPLPSTEVTKLLANQ 1329 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 93/445 (20%), Positives = 179/445 (40%), Gaps = 24/445 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ ++ ++ I D +++ + Sbjct: 613 EERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQ 672 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGII 196 + + + D I ++ + ++ + +I + Sbjct: 673 AGDVLLQEVAGRLGECL----RQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALA 728 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIG 254 E + I + P ++IS ++ A M K + F + Sbjct: 729 QPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNAN 788 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 ++ + + L+ A+E + + YQ + LA I+GAEAL RW + Sbjct: 789 SVS----------RLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELG 838 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIP 373 +SP FIP+A++TG+ + +++ D W + +N+ + + + Sbjct: 839 MVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLY 898 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 Q + + + + P + LE+TE + + ++ ++ +R G + +DDFGTGYSSL Sbjct: 899 QAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLG 958 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ +D LKID+SFV + + +T II MA +LK+ +VAEG+ET Q E+LR Sbjct: 959 YLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRG 1018 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAE 513 G QG+++S+ L EDF+ Sbjct: 1019 QGCDQLQGYIFSRPLVVEDFVGLLR 1043 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 99/447 (22%), Positives = 182/447 (40%), Gaps = 24/447 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ R+++ I + + + D +++ + Sbjct: 300 EEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGHP 359 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH--NVVITSSDEIAQGII 196 + + +D + I+ N V +I + + Sbjct: 360 VGDHLLQQVAHRIA----GCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLA 415 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIG 254 E I + P N+ ++ A M KG R + + Sbjct: 416 APFNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDAN 475 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + L+ A++NR+ V+YQP V + + +I EAL RW Sbjct: 476 ----------ADKRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILG 525 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 +SP FIPLA++TGL P+ ++R+ +W+RQ P +++NL + + Sbjct: 526 LVSPGEFIPLAEETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLL 585 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + +R +++ + + LE+TE +P + ++++ R+ G I +DDFG GYSSL+ Sbjct: 586 ETIRGILDETGLTADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLA 645 Query: 433 YLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 +L+ V+ LKIDKSFV +E + + II M +L LK++AEG+ET Q +L Sbjct: 646 HLKRFSVNTLKIDKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSD 705 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 + QG+L+S +P E + +H Sbjct: 706 NKCDEVQGYLFSTPMPPEKVAEFMREH 732 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 108/452 (23%), Positives = 178/452 (39%), Gaps = 36/452 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 E+ S + + ++ H + D ++V S Sbjct: 327 EKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHS 386 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + + + F V+ + + DA I+ + + Sbjct: 387 QGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIM----------AQK 436 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLP 248 I E I + P E + ++ A M Q K F + Sbjct: 437 ILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCS 496 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + + L+ A++ +HYQP V +A+GKI G EAL RW Sbjct: 497 EEMDT----------RAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRW 546 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 D +SPD FIPLA++TGL L ++R W Q P I++NL + Sbjct: 547 NHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQF 606 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + ++ +++ + ++P + LELTE DP A +++ ++ G + LDDFGT Sbjct: 607 LQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGT 666 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSL+YL+ +D LKID+SF+ + V +I +A +L + +AEG+ET +Q Sbjct: 667 GYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQ 726 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +L QG+L+SK LP D Sbjct: 727 YAFLAMCECDSIQGYLFSKPLPANDLAALLAN 758 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 96/450 (21%), Positives = 182/450 (40%), Gaps = 36/450 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 + ++ + + + I D ++ S Sbjct: 503 EERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNINDSLGHD 562 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 L R + + + + F+ ++ ++ VI +++ Sbjct: 563 IGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSEL----------DSSEEVIFVAEK 612 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKMLQ-KGWHRQVFIWLP 248 + + + + + I I P ++ ++ A M Q K R F + Sbjct: 613 MIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYS 672 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + R L+ AI + + V+YQP VS+ +GK+ G EAL RW Sbjct: 673 PDMN----------RKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRW 722 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVL 367 + ++SP FIP+A++TGL + ++R W Q I++NL + L Sbjct: 723 QHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQL 782 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGT 426 + + ++ ++ + LE+TE ++ I+ + R+ G + LDDFGT Sbjct: 783 KQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGT 842 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLS L++L +D LKID+SFV + ++ +A L LK+ AEG+ET +Q Sbjct: 843 GYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQ 902 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +++R QG+L+S+ +P + +++ Sbjct: 903 LDFIRMLNCEEYQGYLFSRPIPASEVVKYF 932 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 93/448 (20%), Positives = 179/448 (39%), Gaps = 24/448 (5%) Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 + +RR+S+ ++ + I D ++ + Sbjct: 601 DEAQEHIRRLSHFDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYIDIDHFQHINDTL 660 Query: 136 NDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH-NVVITSSDEIAQG 194 R +V + + + + ++ +A ++++ Sbjct: 661 GHRIGDRLLVEIAGRFRNALCAE----NTLARLGGDEFLILLPHAQVECAAHVAEKLIVA 716 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKM-LQKGWHRQVFIWLPLGLV 252 + E + I + P + +++ A T K R + + + Sbjct: 717 AADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATNRAKSDGRNTYRFFAPEMQ 776 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLAN-GKIVGAEALARWPQT 311 + L+ A+E ++ +HYQP + L + G++ G EAL RW Sbjct: 777 L----------RSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHP 826 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSE 370 + +SP FIP+A+ TGL P+ ++++ + W Q + +NL + + Sbjct: 827 EFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQ 886 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYS 429 +P + ++ + + LELTE DP + ++ G + +DDFGTGYS Sbjct: 887 NLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYS 946 Query: 430 SLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL+YL+ +D LKID+SFV L + I+ +A+TL+ + +AEG+E +Q + Sbjct: 947 SLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAF 1006 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAE 513 LR G QG+L+S+ LP ++ W Sbjct: 1007 LRASGCQEVQGYLFSRPLPPDELAVWLR 1034 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 99/454 (21%), Positives = 176/454 (38%), Gaps = 36/454 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + ++ L H++ I D ++ S Sbjct: 443 EAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLG 502 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + V FI V+ + +DAA + Sbjct: 503 HEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAA----------KVA 552 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKMLQ-KGWHRQVFIW 246 +I E + I + P +++ + M K R + + Sbjct: 553 QKILDSFALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQF 612 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 L L+ A+E ++ ++YQP++ + + + G EAL Sbjct: 613 FTDELNKSAYE----------RHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALL 662 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESP 365 RW + ++PD FI LA++TGL P+ +IR+V + W Q ++INL + Sbjct: 663 RWRHPEQKLITPDKFINLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSAR 722 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDF 424 + + + + +++ V + IALE+TE D + ++R G I +DDF Sbjct: 723 QFRDKDLIKNISRILSETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDF 782 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYL+ + LKID+SFV L + + II MA +L+++++AEGIE Sbjct: 783 GTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIE 842 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +Q ++L ++ QG+ +SK + + Sbjct: 843 EQLDFLVTQKCNHYQGYYFSKPVTVSEIELMLMN 876 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 106/441 (24%), Positives = 181/441 (41%), Gaps = 21/441 (4%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 + +++ + +L + D ++ + Sbjct: 426 ARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNL 485 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 +V + ++ + + + + G + E+ + I Sbjct: 486 GDTLLVELA-QRLRAVLRRDDTLSRLG--GDEFVLLLPGANRESAKKIAQELMRAINEPY 542 Query: 200 QKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLA 257 + E I + P M+ ++ A M K R + + Sbjct: 543 RIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQA---- 598 Query: 258 AMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLS 317 R + L+ AI + VHYQP +SL +G ++GAEAL RW + +S Sbjct: 599 ------YSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNIS 652 Query: 318 PDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLL 376 P FIP+A+++GL + ++R W + I++NL + +P L+ Sbjct: 653 PAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLV 712 Query: 377 RDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQ 435 ++ P+ + LELTE DP+ + +++ E G + +DDFGTGYSSLSYL+ Sbjct: 713 MQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLK 772 Query: 436 DLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGV 491 LKID+SFV + E K + II MAK L L+ +AEG+ET++Q+ +LR+ G Sbjct: 773 QFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGC 832 Query: 492 HYGQGWLYSKALPKEDFLRWA 512 H QG+ YSK LP DF + Sbjct: 833 HEAQGYHYSKPLPAADFETFI 853 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 108/473 (22%), Positives = 200/473 (42%), Gaps = 41/473 (8%) Query: 74 CS-EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEP-----------G 121 CS A + +++++ +++ + + + + L H P P Sbjct: 633 CSISAVRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAID 692 Query: 122 KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFI--------DVIPYSSWQID 173 ++ +R+ L + + G ++ + D I Sbjct: 693 LAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEF 752 Query: 174 AAIIGNA--HNVVITSSDEIAQGIITRLQKT-PGEHIENNGIIYDILPLPE-MNISIITW 229 +I + V +++I Q + E I I + P ++ Sbjct: 753 TVLIEGNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQ 812 Query: 230 ASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHY 288 A M K R F + L R + RLQ A+ ++C+++ Sbjct: 813 ADAAMYRAKAHGRSCFRYFSDELT----------RAAEQRLDLEVRLQRALRLNELCLYF 862 Query: 289 QPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGD 348 QP + +++ +I+GAEAL RW +SP FIP+A++TGL + L ++ + Sbjct: 863 QPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKE 922 Query: 349 WLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK-TSA 406 W ++ P ++++N+ + I + + + + + LELTE + + Sbjct: 923 WQQKGLPAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAV 982 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHII 462 I+S R+ G + +DDFGTGYSSL+YL+ +D+LKIDKSFVD + + + I+ Sbjct: 983 EILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIV 1042 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 MA TL+LK++AEG+ET +Q +L++ G QG+L S +P + F + Sbjct: 1043 AMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQ 1095 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 100/447 (22%), Positives = 179/447 (40%), Gaps = 24/447 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +++ ++Y +L + D ++ S Sbjct: 777 EAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHA 836 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVV--ITSSDEIAQGII 196 + +V + + D D++ ++ + +D++ ++ Sbjct: 837 LGDQLLVEVARR----LRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALV 892 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 R + I + P + ++ A T M K R + + Sbjct: 893 PRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQS 952 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 +L + H L+ A+E +HYQP ++ +G++V EAL RW Sbjct: 953 VL----------KRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREG 1002 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIP 373 +SP FIP+A++TGL PL ++ + W +++NL + L S + Sbjct: 1003 LVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALI 1062 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ + ++ + + LE+TE D S + R+ G + +DDFGTGYSSLS Sbjct: 1063 PMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLS 1122 Query: 433 YLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ L +D LK+D+SFV +E + I +A +L L++VAEGIET Q L Sbjct: 1123 YLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLAS 1182 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 H + QG+L+S LP E L + + Sbjct: 1183 HRCDFMQGYLFSAPLPAERALAYIREQ 1209 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 95/447 (21%), Positives = 180/447 (40%), Gaps = 24/447 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +++ ++ I N ++L + +T + DG++ + Sbjct: 268 EQKLKYQAFHDVLTGLPNRIWFNQQLIAALNNAKRQETPLAILFLDLDGFKNINDTLGHT 327 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGII 196 + + G ++ D + ++ + I + I + Sbjct: 328 FGDQVLQKFGKR----LLGSVRAGDTVCRWGGDEFVVLLPYISHTEDSIKLAQRILDVLK 383 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 + + + I P + +++ A + K R F + + Sbjct: 384 HPFEIQKQQFYIKTSMGISIYPQDGEDGETLLKNADAALYRAKERGRNHFQFYSTTMTTK 443 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + L A+EN+++ ++YQP V + G+I G EAL RW + Sbjct: 444 ASLV----------LRLENLLHRALENQELSLYYQPQVKIKTGEITGIEALLRWTHPELG 493 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 +SP IPLA+QT L P+ +++ + DW + I++N + + Sbjct: 494 QVSPHKLIPLAEQTDLIIPIGQWALKTACQQSLDWQKLGIKPLPIAVNFSARQFQQPNLV 553 Query: 374 QLLRDMINHYQVNPRQIALELTEREFADPKT-SAPIISRYREAGHEIYLDDFGTGYSSLS 432 L+ ++ + P + LE+TE + + + R+ G I LDDFGTGYSSLS Sbjct: 554 TLINQVLEETGLAPNLLELEITETTIMQNEDFARQALEELRQMGVHISLDDFGTGYSSLS 613 Query: 433 YLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YLQ + LKID+ F +L+ + II + L+L+++AEG+ET +Q E L++ Sbjct: 614 YLQKFPLTTLKIDQCFTHSLKDNPQDLAIISAIITLGNHLQLRVIAEGVETLQQLEILQR 673 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 QG+ +S+ L ED + +Q+ Sbjct: 674 LHCQEAQGFWFSRPLNSEDITQLLKQY 700 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 181/447 (40%), Gaps = 24/447 (5%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 + ++ ++ + SL + + D +++ S Sbjct: 266 NEEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGH 325 Query: 138 LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGI 195 R + A+ V+ D D + ++ + V + I + Sbjct: 326 SFGDRLLSAVAQRLDRVVRD----TDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHEL 381 Query: 196 ITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVI 253 + E + + + + P ++I A M K VF + + Sbjct: 382 AVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQ 441 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 + L+ A+E + ++YQP V LA+G+I G EAL RW Sbjct: 442 RAMET----------MEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRR 491 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKI 372 ++P FIPLA++TGL P+ +++ + W + ++++NL + + + Sbjct: 492 GVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDL 551 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 P L+R+++ ++P + LE+TE D ++ G + LDDFGTGYSS Sbjct: 552 PGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSF 611 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 ++L ++ LKID+SF+ + + II MA ++LK +AEG+ET Q +LR Sbjct: 612 AHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLR 671 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAEQ 514 + G QG+L S+ LP ++ + Sbjct: 672 KQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 97/439 (22%), Positives = 182/439 (41%), Gaps = 23/439 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 L E+ R + + ++ + I D ++V + Sbjct: 637 LRELERQAKYDGLTGLPNRYLLDDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNVGHR 696 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGII 196 + + V+ D D ++ + + + Sbjct: 697 QGDELLRQAASRLAAVLRDG----DTAARQGGDEFVVLLPDLGDERDAFRILGRLQAALA 752 Query: 197 TRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 + I + P +++ A M Q K R V + + I Sbjct: 753 EPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAKAAGRNVVRFFTAEMNIQ 812 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + R L+ A+EN ++ + +QP V +G+++GAEAL RW + Sbjct: 813 V----------RDRLQLEGALRSALENGELHLAFQPQVDGGSGQVIGAEALLRWQHPELG 862 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQ 374 + P FIPLA++TGL P+ ++R+ W + + I++N+ + S +P Sbjct: 863 AVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAGRRLRIAVNVSARQFRSPDLPA 922 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + ++++ + P + LELTE D + + ++ R ++ G + LDDFGTGYSS +Y Sbjct: 923 RIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYSSFAY 982 Query: 434 LQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 LQ +D LKID+SFV ++ + + II +A +L ++++AEG+ET Q+ L + Sbjct: 983 LQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQLFEF 1042 Query: 490 GVHYGQGWLYSKALPKEDF 508 G QG+L+ + +P +F Sbjct: 1043 GCDELQGYLFGRPVPAAEF 1061 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 92/415 (22%), Positives = 186/415 (44%), Gaps = 18/415 (4%) Query: 108 LEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPY 167 + + + D ++ S ++ + + P + + Sbjct: 305 MMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIE-ASKRLQACLKPGDVVARLGG 363 Query: 168 SSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEM-NISI 226 + I + + N +++I + + + I + P + Sbjct: 364 DEFTIMQNQLLDR-NEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDL 422 Query: 227 ITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDIC 285 + A T + K + + + + L + ++ AIE Sbjct: 423 LKRADTALYTVKSRGKNGYDFFDPSMEAKSLE----------RILMENEMRKAIEQEQFQ 472 Query: 286 VHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFED 345 ++YQP + +A + G EAL RW + + P+ FIP+A++TG+ L I++ + Sbjct: 473 IYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQ 532 Query: 346 MGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTS 405 +W Q +S+NL + + + + ++++D++ +++P + LE+TE F + + Sbjct: 533 NKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVKMEEA 592 Query: 406 APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHI 461 ++ + R+ G +I +DDFGTGYSS SY++ L VD +KID SF+ + E + + I Sbjct: 593 TAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAI 652 Query: 462 IEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 + +A++L + ++AEGIE Q L+++G +GQG+L+SK LP +DF + Q L Sbjct: 653 VTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQEL 707 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 107/478 (22%), Positives = 193/478 (40%), Gaps = 33/478 (6%) Query: 54 KVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESP 113 V G + + + S+A E+R +++ + +L Sbjct: 549 AVKDAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGR 608 Query: 114 PDTFPEPGKISKDGYRVWLTSHND--------LGIIRYMVAMGTAHYVVMIDPASFIDVI 165 I D ++ + IR + V I F+ ++ Sbjct: 609 SGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVML 668 Query: 166 PYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS 225 S I +A + +I + Q + + I + +I Sbjct: 669 EDLSDNIL-----DAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSID 723 Query: 226 -IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 ++ A M Q K R + + L A + L+ AIE Sbjct: 724 ELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSA----------RLALELELRKAIEKDQ 773 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 ++YQ V + +GAEAL RW + ++P FIP+A++TGL P+ ++ + Sbjct: 774 FQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETAC 832 Query: 344 EDMGDWLRQH--PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA- 400 + W + +SIN+ + ++ ++HY ++P + LELTE Sbjct: 833 TQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLE 892 Query: 401 DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKN 456 + T+ +S ++ G LDDFGTGYSSL YL+ L +D LKID+SF+ + Sbjct: 893 NVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMA 952 Query: 457 VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 + II MA+++++ ++AEG+ET +Q + L + G ++ QG+L+SK +P E F + + Sbjct: 953 IVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLLHR 1010 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 99/455 (21%), Positives = 175/455 (38%), Gaps = 28/455 (6%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 ++RR++Y L + + DG++ + Sbjct: 519 SEEKIRRLAYFDTLTGLPNRQSFLERLDRELLRARRTNHRMALLFLDLDGFKRINDTLGH 578 Query: 138 --------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVIT--S 187 R + ++ ++ + V Sbjct: 579 SAGDCLLQTVADRLQEKLRAGAFIARPALDESSLHFARLGGDEFTVVLPDVDTVETACLI 638 Query: 188 SDEIAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFI 245 + I + + E + I + P +++ A T M K R + Sbjct: 639 AQRIQELLGRPTLIGEQEIAVTSSIGIALFPDDGADAATLLKHADTAMYYAKEQGRNNWQ 698 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 L A + + ++ +E + + YQP VS +G IVG EAL Sbjct: 699 LYDRTLTTRTTARLAL----------EGDIRKGLERGEFRLFYQPQVSADDGTIVGVEAL 748 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLES 364 RW +SP FIP+A+++GL P+ ++ + + W + +++N+ + Sbjct: 749 IRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSA 808 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDD 423 L + + +I + ++ LELTE DP+ +SR R G +DD Sbjct: 809 RQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDPEAKRIKGLSRLRAMGVHFSIDD 868 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSLSY++ + LKID+SFV L +T II MA++L L++VAEG+ET Sbjct: 869 FGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAIISMARSLNLEVVAEGVET 928 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +Q +L++ QG+L+S LP ++ + Sbjct: 929 REQLAFLQRALCPKLQGYLFSYPLPPDEMEAILRR 963 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 122/539 (22%), Positives = 198/539 (36%), Gaps = 66/539 (12%) Query: 21 PVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLM 80 P+ ++WLA + +A + Q A LE C Sbjct: 503 PIPAALWLAWVHPDDQAR----------IRQAFEHWQQEPHAPDRLETS-FRVCPPG--G 549 Query: 81 EMRRVSYSYRYI---------QEVAYIDN------NVPQCSSLEHESPPDTFPEPGKISK 125 MR V +YI + V +++ N Q H + + Sbjct: 550 RMRWVHARGQYIAAAEDTAAARLVGTVNDVTDQKENEEQIERYAHFDALTGLANRHALYR 609 Query: 126 DGYRVWLTSHNDLGI-----------IRYMVAMGTAHYVVMIDPASFI--------DVIP 166 + + H +G A V++ + D++ Sbjct: 610 RLGQAITSVHQHQHPLAVLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILA 669 Query: 167 YSSWQIDAAII-GNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNI 224 ++ G + I + ++ E I + P E Sbjct: 670 RLGGDEFLLVLPGADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEAD 729 Query: 225 SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRD 283 +I A M Q K R F + L++A + Sbjct: 730 DLIRNADIAMYQAKARGRNTFQLYTPDMNAA----------AAERLQLQGELRNAHLRGE 779 Query: 284 ICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVF 343 I +HYQP + + +G +VG EAL RW +SP FIPLA+++GL L IR Sbjct: 780 IMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREAC 839 Query: 344 EDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 W R P +++NL ++ D + + P+ + LELTE D Sbjct: 840 RQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHD 899 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNV 457 + ++ + G ++ +DDFGTGYSSL+YL+ VD+LKID+ FV +E + Sbjct: 900 VEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAI 959 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 II + K L L+++AEG+ET Q ++L GV + QG+ +S+ LP ED + Q L Sbjct: 960 VRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQRL 1018 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 93/452 (20%), Positives = 178/452 (39%), Gaps = 37/452 (8%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND-- 137 E+ R+++ + L + I D ++ + Sbjct: 187 EEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVNDTLGHGT 246 Query: 138 ------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEI 191 + R + + V + F+ ++P + V + ++ Sbjct: 247 GDQLLQVVSERLTACLRSCDTVARLGGDEFVVLLPGI----------TERDCVGDIAAKL 296 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPL 249 Q + +Q E + I + P+ ++ ++ A T M K R + + Sbjct: 297 LQSLCKPVQLDAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRNTYRFYTP 356 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 + + + + L+ A+E ++ + YQP VS G ++G EAL RW Sbjct: 357 QMHATSME----------QLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWI 406 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT 368 + PD FIPLA+ TGL P+ ++ W+ Q P +++N+ + Sbjct: 407 HPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFR 466 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTG 427 ++ ++ + P + LELTE + + + ++ G + +DDFGTG Sbjct: 467 ESDFSDTVKAVLQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTG 526 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALEYKN-----VTPHIIEMAKTLKLKMVAEGIETSKQ 482 YSSLSYL+ +D LKIDKSFV + K+ + ++ + +LKL ++AEG+E Q Sbjct: 527 YSSLSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQ 586 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ++L QG+ +S+ L + + Sbjct: 587 VDFLHNRKCDELQGYFFSRPLTPQALEELLRK 618 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 94/455 (20%), Positives = 180/455 (39%), Gaps = 40/455 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 E+RR + I + + H + + D ++ Sbjct: 387 EQELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNFK--------- 437 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVI----------TSS 188 R ++G A M+ A+ + A G+ +V+ Sbjct: 438 ---RINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAIL 494 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ-KGWHRQVFIW 246 ++ T L + E + + + P + +++ A T M + K R + + Sbjct: 495 HKVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNRYQF 554 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + + S L+ A++ + +HYQP + L + +I G EAL Sbjct: 555 YAPEMNARG----------QELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALL 604 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW ++P F+PL + TGL P+ ++R+ IS+N+ + Sbjct: 605 RWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNVSAR 664 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDF 424 + + + + ++ + P + LE+TE D + I++ G + +DDF Sbjct: 665 QFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDF 724 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSL+YL+ +D LKID++F+ + I + L L++VAEG+ET+ Sbjct: 725 GTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETA 784 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +Q +LR+ QG+ +S+ LP + + +H Sbjct: 785 EQLAFLRRRACDLIQGFHFSRPLPADALTPFLARH 819 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 109/453 (24%), Positives = 179/453 (39%), Gaps = 37/453 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 ++R ++ ++ + + D ++ S Sbjct: 1074 EQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHINDSMGHH 1133 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R A+ V + F ++ + A +I S++ Sbjct: 1134 VGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLI----------SEK 1183 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLP 248 + + T + I + P N +I +A T M K R F + Sbjct: 1184 VLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRNNFQFYT 1243 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 L I R L+ AI ++ + YQP SL +G + G EAL RW Sbjct: 1244 HKLN----------EIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRW 1293 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVL 367 T+ +SP FIPLA++TG+ + +I + + +W +++NL + L Sbjct: 1294 HHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQL 1353 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 I + + + + + LELTE +P+ S I+S+ + G I +DDFGT Sbjct: 1354 K-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGT 1412 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYL+ +D LKID+ FV + + +T II +A +L+L +VAEG+ET Q Sbjct: 1413 GYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQ 1472 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +L G QG+L SK L +D L Sbjct: 1473 LNFLGLQGCDEVQGFLLSKPLSAKDCLTLLGNQ 1505 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 95/448 (21%), Positives = 179/448 (39%), Gaps = 20/448 (4%) Query: 75 SEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS 134 S+ ++ ++Y + + S I D ++ Sbjct: 378 SKQSEEKISFLAYHDTLTTLPNQYKFQQDLNTLIARSSIKPKPFSIFTIDLDRFKFINDY 437 Query: 135 HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQG 194 + +GT ++ + + Y + + + ++IA Sbjct: 438 LGYDLGNELLTKVGTRISELL---SEDAKLYRYGGDEFTIIHLDATPEESLQLGNKIASA 494 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLV 252 I + + I P ++ ++I + M K R + Sbjct: 495 ISMAFDISGFDAFITVSIGISHHPDHGKDLNTLIKKSDNAMYFAKKMGRNNVQMFNEEIN 554 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + + L A+E + +HYQP +I G EAL RW + Sbjct: 555 T----------LSTKNLKLESLLYKALERDEFLLHYQPQYDAKTNRISGVEALIRWDNEE 604 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEK 371 +SP FIPLA++TGL P+ ++R+ W + P +S+NL Sbjct: 605 LGMISPADFIPLAEETGLIVPIGEWVMRTACHQNKAWQDEGLPPMVMSVNLSIRQFYQPD 664 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 +PQ++ ++ + P + LE+TE ++ I+ + ++ G I +DDFGTG+SSL Sbjct: 665 LPQVIGKILEESGMAPELLELEITESMAMHADSAISILKQLKQLGVRIAIDDFGTGFSSL 724 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 ++L+ +D LKID+SFVD + E +++ II +A L L++VAEG+E Q+++L+ Sbjct: 725 NHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIMLAHNLNLRVVAEGVENDLQQQFLK 784 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAEQH 515 H QG+ +SK + ++ + Sbjct: 785 DHRCDVFQGFHFSKPVIRDAIPELLRKQ 812 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 93/506 (18%), Positives = 186/506 (36%), Gaps = 37/506 (7%) Query: 28 LAHQQVETSFIEELDTYSSRVAIR--ANKVATQGKDALQELERWQGAACSEAHLMEMRRV 85 + + + +E + +R A V + A + ++ + + ++RR+ Sbjct: 326 MTTGRAVSREVERILDDGEPSGLRLSAFPVFNEQGKATKFIKVVEDITDRKRAEEKIRRL 385 Query: 86 SYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMV 145 +Y ++ H + D ++ S R + Sbjct: 386 AYYDSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQ 445 Query: 146 AMGTA--------HYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIIT 197 + + + F+ + P DA+++ + +I + Sbjct: 446 EVAARLSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLAD----------KILAALAE 495 Query: 198 RLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 I + P ++ A M K + + + Sbjct: 496 PFTLDRQTLHIATSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRA 555 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 + ++ A+ N + + YQP V+ K+VG EAL RW Sbjct: 556 VE----------RHELEEDMRQALTNGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGV 605 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQ 374 + P FIP+A++TG L ++ W P + +NL + T E+I Sbjct: 606 ILPSRFIPVAEETGFISKLGRWVLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVG 665 Query: 375 LLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + D++ + + +ELTE D +T+ + + + G + +DDFGTGYSS +YL Sbjct: 666 TVSDVLQKTGLPSELLEIELTETMLMDSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYL 725 Query: 435 QDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + +D +KID+SF+ + + I+ +A++L +++AEG+ET +Q +L Sbjct: 726 KHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSIT 785 Query: 491 VHYGQGWLYSKALPKEDFLRWAEQHL 516 QG+ +S+ L +D R + L Sbjct: 786 CADIQGFYFSRPLLPDDVSRLIRESL 811 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 101/465 (21%), Positives = 179/465 (38%), Gaps = 20/465 (4%) Query: 57 TQGKDALQELERWQG-AACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPD 115 Q ++ + G A + + +++ + LE D Sbjct: 314 EQEQELIAMAAHLAGIAIERKRAEDRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRERD 373 Query: 116 TFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAA 175 + D +++ S + A+ + A F+ + + I Sbjct: 374 QCAVLAFLDLDNFKLINDSLGHAAGDELLKAVA-GRMRASVRKADFVVRVGGDEFIILLN 432 Query: 176 IIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKM 234 + ++V++ ++I I LQ + + P ++ A M Sbjct: 433 GLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAM 492 Query: 235 L-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVS 293 K R + L++A+ + +H+QP ++ Sbjct: 493 YRAKELGRDNIQVFTEEMAA----------RAHERLQWQEELREALAGEEFLLHFQPQMN 542 Query: 294 LANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH 353 L G+I AEAL RW +SP FIPLA++TGL P+ +R+ + W Sbjct: 543 LGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAG 602 Query: 354 -PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISR 411 P IS+N+ + + +++ + R + LELTE D + + Sbjct: 603 LPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHA 662 Query: 412 YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKT 467 G + +DDFGTGYSSLS L+ V LKID+SFV + + +T II +A+ Sbjct: 663 LEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQK 722 Query: 468 LKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 L L+++AEG+E+ Q E+L++ G QG+ +S+ L E F Sbjct: 723 LGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLL 767 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 88/403 (21%), Positives = 173/403 (42%), Gaps = 20/403 (4%) Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 I D ++V S L + + + ++ I + + + + + + Sbjct: 135 LYIDIDHFKVINDSFGYLKGNLLLGQVAER-FKALLRGNDLIASLGGNRFVVLLTGLAHP 193 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ-KG 238 + I + ++ Q + + E + I P + +++ A M K Sbjct: 194 EDATIVTL-KLMQALESGFCIDNHEVVMTISTGIAIFPGDGDDSEALLQSAEQSMYSVKA 252 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 + + + + ++ AIE + +HYQP ++ +G Sbjct: 253 DGGNNYQFFKASTQSSAIN----------RLNMESEMRKAIERGEFVLHYQPQINATSGH 302 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQH 357 +VG EAL RW + + P FI +A++TG+ P+ ++ W + Sbjct: 303 VVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAGLAELK 362 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAG 416 +++NL + + K+ +R + +NP + LE+TE D + + ++ G Sbjct: 363 VAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEEIASMG 422 Query: 417 HEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKM 472 + +DDFGTGYSSL+YL+ +D LKIDKSF+D + + + II ++ LKL + Sbjct: 423 LSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKLNV 482 Query: 473 VAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + EG+E ++Q WL++ + QG+ +SK LP ++F + Sbjct: 483 ICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFEAFVRSR 525 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 97/453 (21%), Positives = 184/453 (40%), Gaps = 36/453 (7%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 + +++ + S++ + T I D ++ S Sbjct: 1075 SQERLNYMAHHDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGH 1134 Query: 138 LG--------IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSD 189 R + ++ V I F+ V+ A+++ Sbjct: 1135 AAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAVLEDIEDIQHASMV----------VA 1184 Query: 190 EIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWL 247 ++ + + + P M+ + ++ A + M K R + + Sbjct: 1185 KLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFY 1244 Query: 248 PLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALAR 307 + + + L+ A++ + + YQP + L++ + VG E L R Sbjct: 1245 AEEMTSAAFEYVLF----------ENALRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLR 1294 Query: 308 WPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPV 366 W + +SP FIP+A+Q+GL + + ++ WL Q HI++N+ +P Sbjct: 1295 WHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQ 1354 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFG 425 + L++D ++ + + LELTE + + ++ G + +DDFG Sbjct: 1355 IQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFG 1414 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSLSYL+ L ++ LKIDKSFV + + ++ +I + K L L+++AEG+E Sbjct: 1415 TGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIAEGVEQEI 1474 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 Q +LR+ G H QG+LYSK LP E+ + + Sbjct: 1475 QATFLREKGCHEAQGYLYSKPLPPEEITQLFAE 1507 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 100/455 (21%), Positives = 179/455 (39%), Gaps = 28/455 (6%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +R +++ +L + D ++ + Sbjct: 214 EERIRYLAHHDTLTALPNRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHH 273 Query: 139 G--------IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN--VVITSS 188 R M + + + I ++ + + S Sbjct: 274 AGDRLLQEAAGRLMKCLRRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVS 333 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIW 246 I + R E I + P + ++ A T M K R + + Sbjct: 334 QRIITALSKRYVIGGHEVFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQY 393 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + L + + L+ A++ + + YQP + A+G++VG EAL Sbjct: 394 YSGSMNAMALE----------RLTLENNLRWALKRNEFRLCYQPQLDAASGRVVGMEALL 443 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 W + + PD FIPLA++TGL + ++ + WL + P +++NL S Sbjct: 444 SWHRPGCDVVPPDDFIPLAEETGLIASIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSL 503 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 S ++ +L+R ++ + P + LE+TE F + + +A +I ++ G +DDF Sbjct: 504 QFRSRRLAELVRKVLRATGLPPSHLELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDF 563 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLS L +D LKID+SFV + +T II MA+ L L ++AEG+ET Sbjct: 564 GTGYSSLSRLSRFPLDALKIDRSFVRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETH 623 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +Q +LR +G QG+L+S+ L + + Sbjct: 624 EQFAFLRANGCAEVQGFLFSQPLNPDAAAAFLRAR 658 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 95/452 (21%), Positives = 181/452 (40%), Gaps = 37/452 (8%) Query: 81 EMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGI 140 E+R+++YS + + +L S + D ++ + Sbjct: 188 EIRQIAYSDALTGLPNRLALKMDMDKALAKASRNTAMVAVLMLDLDDFKQINDTTGHAKG 247 Query: 141 I--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIA 192 R +G + + F+ V+ ++ +++I Sbjct: 248 DEMLLLLTSRLREQLGEKDSLARLGGDEFVVVLNEI----------DSATCAAKKTEKIL 297 Query: 193 QGII-TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPL 249 + + + I + P + +++ A M K R + + Sbjct: 298 ASLRDNPFDLVVAKVFASASIGIALFPQNGRDAETLLKHADMAMYEAKNVGRNTYRFFSD 357 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 L R L+ A+ ++ + YQP V L G+IV EAL RW Sbjct: 358 EL----------HRRTIERHKLEVGLRRAVRKKEFFLVYQPQVDLGTGRIVALEALVRWQ 407 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT 368 + L P +FIP+A++TGL + I+R+ W R P I++N + Sbjct: 408 HPEAGVLLPSTFIPVAEETGLIHIMGEWILRTACHQAMQWQRMGLPPMRIAVNFSARQFR 467 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTG 427 + + + ++ + P + LE+TE F + +++ + + +I +DDFGTG Sbjct: 468 QPDLVERIEQILLESGLPPHHLELEITESVFMENLESAIETLVDLKTRAIQIAIDDFGTG 527 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSSL+YL++ +D LKI + FV + + I+ MA L +K++AEG+ET +Q Sbjct: 528 YSSLNYLKNFPLDRLKIAQDFVRDIPDDEDDATIIETIMAMANRLGIKVLAEGVETMEQV 587 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +LR+ G H QG+ +++ + E+ + Q Sbjct: 588 TFLRRKGCHEMQGFYFARPMQAEEIAGFLNQR 619 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 97/448 (21%), Positives = 184/448 (41%), Gaps = 38/448 (8%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGII--- 141 ++Y + ++LE + D ++ S Sbjct: 507 LAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLDMDRFKYINDSLGHAVGDQLL 566 Query: 142 -----RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 R + + + F ++P+ +N I + I + Sbjct: 567 IAFSKRLQEQIRETDFAARMGGDEFTVILPHIRD----------NNSAIEVARRIIERTR 616 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 E I I P + +++ A + + K + + + + Sbjct: 617 EPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSMNVQ 676 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 ++ + L+ AI+ ++ ++YQP V++ G+IVGAEAL RW + Sbjct: 677 TY----------KVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAEALIRWNHPEWG 726 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIP 373 +SP+ FIP++++TGL L + R+V +W ISIN+ + S+ Sbjct: 727 LVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSKDFM 786 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ ++ + P + +E+TE + +T + + G I LDDFGTGYSSLS Sbjct: 787 DAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYSSLS 846 Query: 433 YLQDLD--VDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 YL+ ++ILKID+SF+ L + + II++A+ + + +VAEG+ET +Q L Sbjct: 847 YLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQLHIL 906 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 + QG+L+S+ + E F + ++ Sbjct: 907 KLLKCDLVQGYLFSRPVQAEAFAQLLKR 934 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 101/411 (24%), Positives = 175/411 (42%), Gaps = 28/411 (6%) Query: 121 GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFI--------DVIPYSSWQI 172 K +++ ++ + + R +G +I + D + Sbjct: 487 TKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDE 546 Query: 173 DAAIIGN--AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITW 229 + + T + ++ + ++ E I + I + P N + Sbjct: 547 FMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRN 606 Query: 230 ASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHY 288 A T M K R F + + +R L++AI + + Y Sbjct: 607 ADTAMYRAKDVGRNGFQFYSAEMN----------NRMRERLYLEQSLRNAIGLHQLSLWY 656 Query: 289 QPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGD 348 QP + LA+G + AEAL RW +SP FIP+A++TGL P+ +I + Sbjct: 657 QPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAK 716 Query: 349 WLRQ-HPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSA 406 W Q + ++IN+ + L+ K+ + ++ ++P+ + +E+TE + Sbjct: 717 WRDQENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAV 776 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHII 462 + RE G + LDDFGTGYSSL+YL+ +DILKID+SFV + + II Sbjct: 777 CELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTII 836 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +A L + +VAEG+ET Q E+LR +G QG+ + K LP E+ L + Sbjct: 837 NLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 104/440 (23%), Positives = 186/440 (42%), Gaps = 23/440 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 E+ ++ Y + S + T I D ++V S Sbjct: 144 EEEIHQLVYHDNLTGLPNQYMLDSFLESEIYKAKYECTRLALLIIDLDRFKVINDSIGHT 203 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN-AHNVVITSSDEIAQGIIT 197 + + +G ++ S D++ ++ + + V+ D I + + Sbjct: 204 IGDQLLKEVGKR----LVSIVSKSDLLVRKGGDEFVIVLPSIKKDQVLKVVDNIINLLTS 259 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNISII-TWASTKMLQ-KGWHRQVFIWLP-LGLVIG 254 + + + I I P ++ A M Q K + + Sbjct: 260 PFKIKSYDIFTSPSIGVSIFPEDGKTKDLLYKHAEFAMYQAKKSGNGQYHFFSSAEFNGD 319 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + + L+ AIE + +HYQP ++L+ G+++G EAL RW Sbjct: 320 MNPY-----------TIEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWG 368 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQ 374 +SP SFIP+A+ +GL P+ ++ + W +S+NL + Sbjct: 369 LISPASFIPIAEDSGLIVPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLAS 428 Query: 375 LLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 ++++ + + ++P + +E+TE AD + + ++ G ++ +DDFGTG+SSL YL Sbjct: 429 VIKNTLFNTGLDPHLLEIEITESMTADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYL 488 Query: 435 QDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + V+ LKID+SFV L + + + II MA+ L L +VAEGIET +Q +L+QH Sbjct: 489 KKFPVNTLKIDRSFVSELHNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHL 548 Query: 491 VHYGQGWLYSKALPKEDFLR 510 H GQG+L+SK LP Sbjct: 549 CHEGQGFLFSKPLPPSVLEE 568 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 110/451 (24%), Positives = 182/451 (40%), Gaps = 35/451 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + + R + I ++ + + D ++ + Sbjct: 482 EYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLG 541 Query: 137 DLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + + V + F+ ++P + + Sbjct: 542 HAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDL----------TDTSSAEVVA 591 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ-KGWHRQVFIW 246 ++I E I I P E + I ++ A M + K + VF + Sbjct: 592 EKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVFRY 651 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + L +L+ AIE ++ VHYQP+V G++VGAEAL Sbjct: 652 FTPEMNARALEH----------MRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALL 701 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPV 366 RW +SP+ FIPLA++TGL + ++R+ D W R + +++N+ Sbjct: 702 RWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGKQ 761 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFG 425 + +++R +N + P + LELTE + + + II G +DDFG Sbjct: 762 FQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFG 821 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSK 481 TG+SS+SYL+ D LKID+SF+ L + II MA ++ LK+V EG+ET Sbjct: 822 TGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHG 881 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 Q E+LR G H QGWLYS+ +P +DF Sbjct: 882 QREFLRLSGCHIAQGWLYSRPIPGKDFQELI 912 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 113/479 (23%), Positives = 198/479 (41%), Gaps = 37/479 (7%) Query: 49 AIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSL 108 + V + + ++ + +AH +++R+++ + Sbjct: 357 LATISAVMDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHI 416 Query: 109 EHESPPDTFPEPGKISKDGYRVWLTSHNDL--------GIIRYMVAMGTAHYVVMIDPAS 160 E + D ++ S IR + +V I Sbjct: 417 ETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDE 476 Query: 161 FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQK-TPGEHIENNGIIYDILPL 219 F+ ++P + ++ + +I + I + P Sbjct: 477 FVIILPDVHSDV----------ALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPR 526 Query: 220 PEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQD 277 + +++ A T M K R + + L ++ + L Sbjct: 527 DGQDSETLLKNADTAMYLAKKNGRNGYAFYSPDLTDKSVSHV----------RIQSALHQ 576 Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 AIE + + + +QP +L IVG E L RW + + P FIP+A++TGL + + Sbjct: 577 AIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEW 636 Query: 338 IIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTE 396 ++ + WL Q + I++N+ + L Q L D++N +++ LE+TE Sbjct: 637 VLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITE 696 Query: 397 R-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL--- 452 DP+ + +++ RE G EI LDDFGTGYSSLSYL+ L ++ LKID+SFV + Sbjct: 697 SFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSN 756 Query: 453 -EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + + II M KTL LK+VAEGIET +Q ++L + G YGQG+L+S+ + E R Sbjct: 757 SDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 95/452 (21%), Positives = 168/452 (37%), Gaps = 38/452 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ + Y + +L +S + F I D ++V Sbjct: 385 EAQINDLVYLDPLTGLPNRRLFSDRL-DALLGQSQSEQFAL-YYIDLDNFKVINDRFGHS 442 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + + + FI + P N+ + E Sbjct: 443 IGDQFLKQVTTRIQSTIQKTDTLARLGGDEFIILSPD-----------TKSNLAAHRAQE 491 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEM-NISIITWASTKML-QKGWHRQVFIWLP 248 + + + E I + P +I A M K + + + Sbjct: 492 LINVLHPPFELENEEVFTGASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQFFT 551 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 L + R + L+ I + VHYQP + L ++G EAL RW Sbjct: 552 NELNESV----------SRRSNLSMALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRW 601 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 + +SP FIP+A++TG L ++ W P +++N+ + Sbjct: 602 NHPELGMISPGEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQF 661 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTG 427 + +P+++ + + + + LELTE + + G + +DDFGTG Sbjct: 662 AQKDLPEVVSRALAASGLEAQYLELELTESVIQSADRAIETMHELVALGVHLSIDDFGTG 721 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSSLSYL+ +D LKID+ F +E + II MA L L ++AEG+ET Q Sbjct: 722 YSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQV 781 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +L+ + QG+ Y++ LP E+ + +Q+ Sbjct: 782 AFLKAESCNQAQGYFYNRPLPAEEIEVFFQQY 813 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 95/443 (21%), Positives = 179/443 (40%), Gaps = 24/443 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ + N +L D F I D +++ S Sbjct: 383 EDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGA 442 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH--NVVITSSDEIAQGIIT 197 + +G+ + D D + ++ N + I +I Sbjct: 443 GDELIANVGSRLQTCVRDG----DTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIK 498 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 + E + + P + S++ A T M K R F + + Sbjct: 499 PMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNATS 558 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 S L A++N ++ + YQP + L +G ++G EAL RW Sbjct: 559 GE----------RLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGL 608 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQ 374 ++P FIP+A+ GL P+ + ++ + ++ P ++INL + L+ + Sbjct: 609 IAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVE 668 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 ++ +I ++P + LE+TE + + ++ + G ++ LDDFGTG+SSL+Y Sbjct: 669 SVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAY 728 Query: 434 LQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ +D LKID+SF+ + II +A LK+K++AEG+E S+ +L+++ Sbjct: 729 LKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKN 788 Query: 490 GVHYGQGWLYSKALPKEDFLRWA 512 G GQG+ S+ L +D + Sbjct: 789 GCDEGQGYFISRPLTFDDLRMFL 811 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 499 bits (1286), Expect = e-140, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 180/450 (40%), Gaps = 36/450 (8%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND-- 137 + R + ++ + I D ++ S Sbjct: 383 EALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSA 442 Query: 138 ------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEI 191 L R + V + F+ ++ S + T I Sbjct: 443 GDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDE----------SIHTVVQRI 492 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPL 249 II T + I P N ++++ A + M Q K F + Sbjct: 493 RNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSNNFRFYAK 552 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 + L S + L A+EN+ + +HYQP V + N +I+G EAL RW Sbjct: 553 EMNAELG----------HRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQ 602 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT 368 + P FIPL++ GL P+ + ++ + P +++NL L Sbjct: 603 HPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLE 662 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTG 427 + + + + H ++P+ + LE+TE + + S ++R + G ++ LDDFGTG Sbjct: 663 QKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTG 722 Query: 428 YSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSSLSYL+ L ++ LKIDKSF++ + + II +A +L+++++AEG+E++ Q Sbjct: 723 YSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQY 782 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +L ++G QG+L S+ P E+ Sbjct: 783 AFLLENGCDEVQGYLLSRPRPFEEMEALLR 812 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 104/455 (22%), Positives = 181/455 (39%), Gaps = 36/455 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A +R +++ + +L I D ++ + Sbjct: 464 ATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLG 523 Query: 137 DLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R A+ + V + F+ +P DAA + + Sbjct: 524 HQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLAD--------- 574 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIW 246 +I + I E + I + P I ++ A M K R + + Sbjct: 575 -DITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQF 633 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + I L+ AI R+ +HYQP + L +G IVG EAL Sbjct: 634 FTEDMNIAT----------TERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALI 683 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESP 365 RW +SP FIP+A+++G+ + ++ + W + +SINL + Sbjct: 684 RWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAG 743 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDF 424 + +P + +++ ++ ++ LE+TE A P S ++ +G + +DDF Sbjct: 744 QFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDF 803 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSL+YL+ L + LKID+SFV +E ++ + +A L L++VAEG+ET Sbjct: 804 GTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETE 863 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 Q ++L G QG+L SK LP + R+ + Sbjct: 864 AQLKFLLSIGCEKVQGYLISKPLPADQAERFIRNN 898 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 101/448 (22%), Positives = 177/448 (39%), Gaps = 32/448 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A + R++Y ++L+ + + D ++ S Sbjct: 969 ASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLG 1028 Query: 137 DLGIIR--------YMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + V + F ++P + A I + Sbjct: 1029 HAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIAL------KRAIQVA 1082 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISI-ITWASTKMLQ-KGWHRQVFIW 246 + I + E I + P +S+ + A T M K + F + Sbjct: 1083 ELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQF 1142 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + L L+ A+E + +HYQP + ++ GAEAL Sbjct: 1143 YQAEMNARALE----------RLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALL 1192 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESP 365 RW + P FIP+ ++ GL + ++ + + W + + +S+NL + Sbjct: 1193 RWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSAR 1252 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 ++ + + ++ + P + LELTE D + I+S + G I +DDF Sbjct: 1253 QFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDF 1312 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSL+YL+ +D+LKID+SFVD L + II MA +L L ++AEG+E+ Sbjct: 1313 GTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQ 1372 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDF 508 Q ++LR+HG QG+L+ + +P E F Sbjct: 1373 AQLDFLREHGCDEVQGYLFGRPMPAEQF 1400 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 90/448 (20%), Positives = 179/448 (39%), Gaps = 21/448 (4%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 + + + ++++ + D ++ + Sbjct: 545 SQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGH 604 Query: 138 LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIIT 197 + + + + D + + + + + ++ + +I + Sbjct: 605 QMGDKLLFEVSQRIRAAVRDSDA-VARLGGDEFIVMMDVL-REREDAAKVAKKIISSLQN 662 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 E + + + P +++ +I A M Q K + + L Sbjct: 663 EFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADL---- 718 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 + + ++L+ A+ V+YQ VSL G+I+GAE+L RW + Sbjct: 719 ------SQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGV 772 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQ 374 +SP FIPLA++TGL P+ ++R + +W Q +S+N+ + Sbjct: 773 VSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFAD 832 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + ++ + LE+TE + + + R + G + +DDFGTGYSSLS+ Sbjct: 833 TVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSH 892 Query: 434 LQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ L +D +KID+SFV L + + I MA++L ++AEG+ET +Q +L++ Sbjct: 893 LKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKI 952 Query: 490 GVHYGQGWLYSKALPKEDFLRWAE-QHL 516 G GQG+LYS+ + +F + L Sbjct: 953 GCQQGQGYLYSRPVTASEFTALLRAEQL 980 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 89/445 (20%), Positives = 178/445 (40%), Gaps = 20/445 (4%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ ++ + ++ + + D +++ S Sbjct: 640 EERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLINDSFGHQ 699 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 + + ++ I + + + + + + T +++I + Sbjct: 700 TGDELLRETASR-LEQVVGGRGQIARLGGDEFTLLVSHFA-SQATLSTLAEDILAVLAQP 757 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLL 256 L E I + + P + +++ A M K + + + + + Sbjct: 758 LWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKNTYQFFAAEMNAQAI 817 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 L+ A+E + +H+QPIV+ A ++ E L RW + + Sbjct: 818 E----------RLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLV 867 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQL 375 SP FIPLA++TGL P+ +IR + +W ++INL + + + Sbjct: 868 SPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQ 927 Query: 376 LRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + + + ++ LE+TE +P + ++ + G + +DDFGTGYSSLSYL Sbjct: 928 VAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYL 987 Query: 435 QDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + +D LKID+SF++ L + + I+ MA+ L +VAEG+ET Q +L G Sbjct: 988 KRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKG 1047 Query: 491 VHYGQGWLYSKALPKEDFLRWAEQH 515 QG+L+S+ LP + + +Q Sbjct: 1048 CQLLQGYLFSRPLPAAELPAFLQQR 1072 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 93/410 (22%), Positives = 176/410 (42%), Gaps = 27/410 (6%) Query: 124 SKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV 183 ++ G V L + A+G ++ + + + G+ + Sbjct: 145 NRTGASVALMTMGLDRFTLVNDALGHGAGDRLLMEVARRLKMCVRETDTAVRLDGDKFAL 204 Query: 184 V---------ITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTK 233 V + +++ + E + I + P + + ++ A Sbjct: 205 VMAIADTDDSVIVAEKALNAVKEPFALDGQEVVVTFSIGISVYPLDADSSAQLVKHAENA 264 Query: 234 M-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 + K R + + + R + R++ A+ N++ V YQP V Sbjct: 265 LHYAKVSGRNQYQFFSKDMN----------RKAKSRLELEGRMRRALANQEFVVFYQPKV 314 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 S IVGAEAL RW + + P FIP+A+++G EP+ ++R W Sbjct: 315 SADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGTWVLRQSCIQNRLWQEA 374 Query: 353 HP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIIS 410 +S+N+ + S + Q + ++++ ++P+ + LE+TE D T+ + Sbjct: 375 GFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEITESMLMNDVDTAVRKMK 434 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAK 466 R+ G + +DDFGTGYSSLSYL + LKID++F+ ++ + II +++ Sbjct: 435 ALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTNPKTAEIARAIIGLSR 494 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 L L++VAEG E ++ +LR +G QG+ YS+ +P ++F R Q + Sbjct: 495 GLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADEFERMMGQRV 544 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 121/490 (24%), Positives = 200/490 (40%), Gaps = 39/490 (7%) Query: 36 SFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEV 95 + IE+L + + R + Q LE + R R + Sbjct: 342 AEIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATH---DELTGLANRTLLLDRLDHAI 398 Query: 96 AYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVM 155 E I D ++V S R + +G + Sbjct: 399 -------------EEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKR----L 441 Query: 156 IDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQGIITRLQKTPGEHIENNGII 213 D + A ++G+ +N +I ++ + I + + I Sbjct: 442 CQHVRSTDTVSRLGGDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIG 501 Query: 214 YDILPLPEMN-ISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPH 272 + P + I+++ A M Q H+ F + + + +I Sbjct: 502 ISLFPNDGNDSITLLRNADLAMYQSKRHKGDFTFYSSDMNQHAV----------KILELE 551 Query: 273 HRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSE 332 L+ A+E ++ +HYQP VSL +GKIVG EAL RW +SP FIPLA++TGL Sbjct: 552 KDLRQALERGELLLHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIV 611 Query: 333 PLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIA 391 P+ ++ + W +Q +++NL S + ++ ++ ++P + Sbjct: 612 PIGTWVLEQACQQAISWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLD 671 Query: 392 LELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD 450 LE+TE DP+ + + +E G + LDDFGTGYSSL+YL+ VD LKID SF+ Sbjct: 672 LEITESMIMDDPEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIR 731 Query: 451 ALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKE 506 + V I+++A L L VAEG+ET +Q ++L + QG+LYS+ LP E Sbjct: 732 DVAQDSSSAAVAVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAE 791 Query: 507 DFLRWAEQHL 516 DF +L Sbjct: 792 DFTSLLRSNL 801 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 90/456 (19%), Positives = 166/456 (36%), Gaps = 37/456 (8%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +R ++Y N + + + D ++ + Sbjct: 243 EAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVNDTLG 302 Query: 137 DL--------GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + V + F+ ++ + + Sbjct: 303 HAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLP----------RVA 352 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIW 246 D+I + + + E + + I P + ++ A M K F + Sbjct: 353 DKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFRF 412 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + ++ L+ A+E + + YQP + L K+ G EAL Sbjct: 413 YSSEMNARAVS----------RMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALL 462 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW + P FI LA++T L PL ++R VFE W ++ + IN+ Sbjct: 463 RWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGR 522 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 ++ +++ P + E+TE D + + ++ G + +DDF Sbjct: 523 QFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDF 582 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLS L+ L ++ LKIDKSF+ L + + + I MAK L+L + AEG+ET Sbjct: 583 GTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETE 642 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFL-RWAEQH 515 Q ++++ QG+ +S+ L + W + Sbjct: 643 GQYGFVQKRECDEVQGFYFSRPLSPSEVADAWLIKR 678 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 105/457 (22%), Positives = 193/457 (42%), Gaps = 32/457 (7%) Query: 76 EAHLMEMR----RVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPE-PGKISKDGYRV 130 H +R R+ + R +++ + + S E + G + Sbjct: 1027 PVHFSVLRKRVARLLDASRAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQF 1086 Query: 131 WLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVIT---- 186 + + +G +++ A+ V S + A + G+ V++ Sbjct: 1087 AVLFLDLDRFKLVNDTLGHEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKIES 1146 Query: 187 ------SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQKGW 239 + +I + + E + I + P ++ +++ A T M + Sbjct: 1147 PRVAAEVAAKICSVLSKVFAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKE 1206 Query: 240 HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 + + G+ + + L+ A+E ++ ++YQP ++L G+I Sbjct: 1207 QGNSYQFYEKGMETAAV----------KRLGLEAELRRALEQNELALYYQPQINLGTGEI 1256 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHI 358 E L RW + + P FIPLA++TGL + I+R M WL++ HI Sbjct: 1257 ATLETLIRWHHPEHGLIPPSEFIPLAEETGLIASIGAWILREACTQMQSWLQRGFGPFHI 1316 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGH 417 ++N+ L E + + ++ + P+ + LE+TE + P R RE G Sbjct: 1317 AVNVSGRELEREDLVDKIVTILKETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGI 1376 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMV 473 + +DDFGTGYSSL+YL+ VDILKID+ F+ + + + II +A +L+LK+V Sbjct: 1377 KFAIDDFGTGYSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVV 1436 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 AEG+ET QEE+L+ H QG+ S+ L + + Sbjct: 1437 AEGVETQAQEEFLKAHQCDRFQGFYLSEPLSAAEIEQ 1473 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 90/457 (19%), Positives = 170/457 (37%), Gaps = 28/457 (6%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 E+ +++Y + +LE + D + + Sbjct: 252 KMEKELLQLAYHDPLTGLLNQHSMRERIARALELPGQHGRMTAILWVDIDHLKRVNATFG 311 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VIT 186 R + + I + ++ +V Sbjct: 312 HELGDVLLQRVADRMLGCARRTDRKARLGSDQSIKAVARMGGDDFVVLLTEISHVKGAAN 371 Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVF 244 + + + E I + P +++ A + M K R F Sbjct: 372 LAKRLLDDLSQPFVLDRHEVYVTASIGIAVHPHDGAEAGTLLKNADSAMHHAKAEGRNNF 431 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + R + L+ A+ R++ V YQP + L G+ VG E Sbjct: 432 QFYTSS----------GKTAALRSLTLEGDLRMALARRELFVEYQPEIDLKTGETVGLET 481 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLE 363 L RW + P FIPLA++TGL P+ I+ W + +++NL Sbjct: 482 LVRWDHPTLGLIPPLDFIPLAEETGLILPIGEWILSIACMQNAIWHKSGLEPIRVAVNLS 541 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLD 422 + + + + + +++P+ + LE+TE + ++ + + G + +D Sbjct: 542 GHQFRQRNLIKTIAKTLTNSRLDPQHLELEITESTLMENAASTIHTVKELKSMGVRLAVD 601 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIE 478 DFGTGYSSLSYL+ +D+LKID+SF+ + + +T II MA L L+++AEG+E Sbjct: 602 DFGTGYSSLSYLRRFPLDVLKIDRSFIRDVTINADDAAITRAIIAMAHNLNLEVIAEGVE 661 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +Q ++L+++ QG+ Y + L + E+ Sbjct: 662 NEQQLQFLQENNCDMAQGYYYCRPLTPAKLTKHLEKQ 698 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 101/454 (22%), Positives = 186/454 (40%), Gaps = 25/454 (5%) Query: 73 ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWL 132 ++ ++ +++ + + ++ + D ++ Sbjct: 611 TATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFKEVN 670 Query: 133 TSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDE 190 S + + + S D I ++G + + ++ Sbjct: 671 DSLGHSVGDLVLTEVAQR----LRQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQAAQN 726 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLP 248 + + Q + I + P + S+I T M K F + Sbjct: 727 VLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQ 786 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + L + +RL+ A+E + ++YQP ++ +VGAEAL RW Sbjct: 787 ETMFTAALG----------RMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRW 836 Query: 309 PQTDGS-WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPV 366 Q + +SP FIPLA++TGL P+ ++R W + P I++NL + Sbjct: 837 VQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQ 896 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFG 425 + + ++ + + LE+TE D T+ + + ++ G + LDDFG Sbjct: 897 FKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFG 956 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSLSYL++ +D LKID+ FV L E + V II +A +LK+++VAEG+E + Sbjct: 957 TGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDAD 1016 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 Q +LRQ G QG+ +S+ LP ++F ++ Sbjct: 1017 QVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQ 1050 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 89/445 (20%), Positives = 175/445 (39%), Gaps = 24/445 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +R ++ +L + + D ++ + Sbjct: 441 EQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTINDTLGHS 500 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH--NVVITSSDEIAQGII 196 + + A+ + + D I ++ H N V ++ + + Sbjct: 501 VGDQLLKAVAHRLTHCLREG----DTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSALE 556 Query: 197 TRLQKTPGEHIENNGIIYDIL-PLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 E I I ++I A + Q K R + + GL G Sbjct: 557 QPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRNTYQFFCSGLSNG 616 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + L+ A+E ++ ++YQP V++ GKI G EAL RW + Sbjct: 617 APE----------RLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMG 666 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 + P F+ +A+++GL + ++R+ W Q P I++NL + + Sbjct: 667 LVIPQLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLT 726 Query: 374 QLLRDMINHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ +++ + P+ + LE+TE D + + ++ ++ G +I +DDFGTGYSSL+ Sbjct: 727 GMIARILDETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLA 786 Query: 433 YLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 +LQ ++ LKID+SFV + + +I +A+ L L +VAEG+E +Q L Sbjct: 787 HLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLES 846 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAE 513 QG+++++ L + + Sbjct: 847 LHCEEAQGYIFNRPLEADAATEILQ 871 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 102/452 (22%), Positives = 179/452 (39%), Gaps = 36/452 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + +S + + + +L + + + D ++V S Sbjct: 275 ESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMG 334 Query: 137 DLGIIRYMVAMG--------TAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 + + + + F V+P + DAA++ + Sbjct: 335 HEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQNRDAALL----------A 384 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIW 246 E+ + + + E I + P E ++ A + M K R F + Sbjct: 385 QEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGRNNFQF 444 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 L LA L++A++ ++ + YQP + LA GK++G EAL Sbjct: 445 YRSELNTASLA----------RILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALI 494 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESP 365 RW + +SP FIPLA++TGL P+ ++ W+ Q IS+NL Sbjct: 495 RWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGI 554 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 +++ + + P + LELTE D + + ++ G + +DDF Sbjct: 555 QFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDF 614 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTG+SSLSYL+ +D LKID+SFV E + I +A +L L+++AEG+E Sbjct: 615 GTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHL 674 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +Q E+L Q QG+ Y + L + F + Sbjct: 675 EQLEFLAQESCDEIQGYFYGRPLSGDKFEMFM 706 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 110/498 (22%), Positives = 199/498 (39%), Gaps = 28/498 (5%) Query: 34 ETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQ 93 + L S + A + + AL E ++ +E E+ Sbjct: 159 VGTTESALKLLSIVLFNTAYALESAALYALMEQQQRTLKKITERQSKELVHQYSHDLLTN 218 Query: 94 EVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGT---- 149 I S+ + D + D ++ S + +G Sbjct: 219 LPNRILFVDRLEQSIGRRASRDAHLAVILLDLDNFKRVNDSLGHKSGDLLIKQLGEDLRK 278 Query: 150 ---AHYVVMIDPASFIDV-IPYSSWQIDAAIIG--NAHNVVITSSDEIAQGIITRLQKTP 203 + + + + I+ ++ ++V+ + + I Sbjct: 279 VFLGNELARRYGIEASSITLSRLGGDEFGIILDEVDSLDLVVRIVQHLIEVISREHDIEG 338 Query: 204 GEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFV 261 + + + P + ++I A M K R F + + Sbjct: 339 HQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQRGRNSFQFYTKDINSQTY----- 393 Query: 262 LRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSF 321 R ++L A+ + VHYQP V + +G++VGAEAL RW + P +F Sbjct: 394 -----RQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQPPANF 448 Query: 322 IPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMI 380 I +A++TG+ E L +++ V +D+ R + ISINL + + + R+ I Sbjct: 449 IAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTI 508 Query: 381 NHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDV 439 + P I LELTE D + ++ + G + +DDFGTGYSSL+ L+ + Sbjct: 509 RSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPI 568 Query: 440 DILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQ 495 D LKIDKSFV + + + + I+ +AK+L+L++VAEG+ET +Q +L++ G Q Sbjct: 569 DTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQ 628 Query: 496 GWLYSKALPKEDFLRWAE 513 G+ +S+ LP E F + + Sbjct: 629 GYFFSRPLPFEGFREYLK 646 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 93/453 (20%), Positives = 177/453 (39%), Gaps = 27/453 (5%) Query: 75 SEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS 134 S A + ++ + + + LE +P I D ++ S Sbjct: 212 SRAQAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLIIDLDNFKTINDS 271 Query: 135 HNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIA 192 R + + M + ++ VI ++A Sbjct: 272 LGHHAGDRLLSELARRLGAQM----DLTKRLFRLGGDEFVVVVDQLINEEAVIELVQQLA 327 Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLG 250 GI + I + P + ++I A T M K R + Sbjct: 328 GGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRNNHKFFTEP 387 Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 + + L A+ + ++YQP + L +GK+VG EAL RW Sbjct: 388 MNAA----------ANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRH 437 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTS 369 + P FIP+A++ GL PL ++ + +WL +++N+ + Sbjct: 438 PLRGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQ 497 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGY 428 + ++ ++ + ++ LE+TE + + +++ R G ++ +DDFGTGY Sbjct: 498 PEFISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGY 557 Query: 429 SSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSL+YL+ +D LKID+SF+ +E ++ I+ + ++L L++VAEG+E Q E Sbjct: 558 SSLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAE 617 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFL---RWAEQ 514 +LR QG+ + + + E+ + R+ E Sbjct: 618 FLRTLECERVQGFHFYQPVCAEEVVGVGRFLEN 650 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 94/444 (21%), Positives = 179/444 (40%), Gaps = 25/444 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ +++ L H + T + D ++ S L Sbjct: 310 SRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLV 369 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGIIT 197 + + + D + ++ ++ + +I + + Sbjct: 370 GDHLLQEVA-QRLKASVRED---DTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQ 425 Query: 198 RLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 + + I + P ++I A M + K R F + + Sbjct: 426 TIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHA 485 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 L + + L A+E + + +QP +G I+GAEAL RW Sbjct: 486 LE----------RLALENDLHRAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHPQRGL 534 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQ 374 ++P FIP+A++TGL P+ ++ + + W + +S+N+ + + + + + Sbjct: 535 VTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLE 594 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 L+R ++ + P + LELTE D ++ ++S +E G + +DDFGTGYSSLSY Sbjct: 595 LIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSY 654 Query: 434 LQDLDVDILKIDKSFVDALEY----KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ + LKID+SFV L +T II +AK L ++++AEG+ET++Q +L+ Sbjct: 655 LRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQ 714 Query: 490 GVHYGQGWLYSKALPKEDFLRWAE 513 QG +S+ + E F Sbjct: 715 CCDEFQGHFFSQPVSPEKFAELLR 738 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 96/443 (21%), Positives = 190/443 (42%), Gaps = 20/443 (4%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ +++ ++++ + + + D ++ S Sbjct: 501 ERIQFLAHFDVLTGLPNRAHIQDRVELAIQNATRDNERLALLLLDLDRFKTINESLGHSA 560 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 + + ++ + + + +I + + + ++ I + + + Sbjct: 561 GDALLQVLAERIRSTLLTG-EVVARQGGDEFIVLLPLIADPGSAALA-AERIREVLEPPV 618 Query: 200 QKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLA 257 + I + P + +++ A M K R + + L Sbjct: 619 ELFNHSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNA---- 674 Query: 258 AMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLS 317 R I +L+ A++ + +HYQP V L G+I+GAEAL RW + L Sbjct: 675 ------RAREILEIESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLG 728 Query: 318 PDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLL 376 P FI +A++ G + +I+ + W RQ P+ +++NL + + + L Sbjct: 729 PVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHL 788 Query: 377 RDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQ 435 + ++ + + + +E+TE D +T+ I R + G ++ +DDFGTGYSSLSYL+ Sbjct: 789 QRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLK 848 Query: 436 DLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGV 491 D LKID+SFV + + + II MAK L + ++AEG+ET +Q ++L + G Sbjct: 849 RFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGC 908 Query: 492 HYGQGWLYSKALPKEDFLRWAEQ 514 H QG+L +K +P ++F R E+ Sbjct: 909 HAAQGYLLAKPVPAKEFERLLEK 931 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 496 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 87/444 (19%), Positives = 185/444 (41%), Gaps = 25/444 (5%) Query: 81 EMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGI 140 ++++++Y +L + F + D ++ + Sbjct: 623 QIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATG 682 Query: 141 IRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQGII-T 197 + ++ + D + ++ + ++ +++++ + Sbjct: 683 DLLIRSVAER----LRTECRTCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTER 738 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 + + I + P + +++ A T M K R + + L L Sbjct: 739 PFATSECDINTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQL---- 794 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 R L+ A++ ++ + YQP + L +I G EAL RW + Sbjct: 795 ------AEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGT 848 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQ 374 +SP FIPLA++TGL PL +++ W + + +++NL + + + Sbjct: 849 ISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAK 908 Query: 375 LLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 ++ ++ ++P + LE+TE + + + ++ ++ G + +DDFGTGYSSLSY Sbjct: 909 NIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSY 968 Query: 434 LQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ L +D +KI + FV ++ + I MAK+L +K++AEG+E +Q +L H Sbjct: 969 LKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLH 1028 Query: 490 GVHYGQGWLYSKALPKEDFLRWAE 513 G H QG+ ++K +P ++ + Sbjct: 1029 GCHAMQGYYFAKPMPAQEVPSFIH 1052 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 106/493 (21%), Positives = 189/493 (38%), Gaps = 38/493 (7%) Query: 30 HQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSY 89 Q + + A + + + E ++RR++Y Sbjct: 259 FVQQADKQRIHVAVFFPETGYFAFLMEDVTQRKVNE--------------EQIRRLAYYD 304 Query: 90 RYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGT 149 L T + D ++V + + +V + Sbjct: 305 NLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDRFKVINDTMGHAHGDQLLVQVAN 364 Query: 150 AHYVVMIDPASFIDVIPYSSWQIDAAI--IGNAHNVVITSSDEIAQGIITRLQKTPGEHI 207 + D + + + V + + I + + + Sbjct: 365 RLRQALRSS----DTLARIGGDEFVVLFTLEGPQLNVSPLAQHLIDSITSVYPISGRDVY 420 Query: 208 ENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRIL 265 + I P + S++ A M K + + + + + Sbjct: 421 ASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFYSPEMNLK----------A 470 Query: 266 RRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLA 325 L+ A+E + + +QPIV+ +G++VGAEAL RW + + PD FI +A Sbjct: 471 HARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFIQVA 530 Query: 326 QQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQ 384 +++G PL ++R+ M DW P IS+N+ + +I Sbjct: 531 EESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSIIRETG 590 Query: 385 VNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILK 443 ++P +ALE+TE D + +A + + +E I +DDFG GYSSL YLQ +D +K Sbjct: 591 MDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDRIK 650 Query: 444 IDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLY 499 ID+SF+ L K + II MA LKL++VAEG+ETS+Q ++L++ G H QG+ + Sbjct: 651 IDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGFYF 710 Query: 500 SKALPKEDFLRWA 512 + L +E F Sbjct: 711 HRPLSEELFKTLL 723 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 104/449 (23%), Positives = 179/449 (39%), Gaps = 24/449 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 H + + R++ S+L + + DG++V + Sbjct: 221 DHEVALYRLNNYDGLTHLPNRNLLYQQLESALVNARKRHRQFGLLYLDLDGFKVINDNFG 280 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 + + + + ++ N + + + I Q Sbjct: 281 HRVGDELIQRVAER----IKGSIPSSACLYRLGGDEFVVVLENTNEIEELESIAQSIMQN 336 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLV 252 E + I P ++ ++ A M K ++ + Sbjct: 337 ASNTYPVAKMEMMITASIGIASYPQHADDVDNLLKNADAAMYRAKSTGHNMYCVYEDHM- 395 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + + L+ AIE +HYQP + L + +VGAEAL RW + Sbjct: 396 ---------ADNINAHLTLGGGLRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHPE 446 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEK 371 +SPD FIPLA+++GL PL +IR + +W +S+NL S Sbjct: 447 LGMISPDQFIPLAEESGLILPLGEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQAD 506 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + +++ + V+P + LELTE D + S + +R+ G + +DDFGTGYSS Sbjct: 507 LVDMVQRALEETGVDPEYLELELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGYSS 566 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ + LKID+SF+ L + + I MA +L LK++AEG+E Q + L Sbjct: 567 LAYLKKFPIQTLKIDRSFIHDLGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVDVL 626 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + QG+L+SK L +DFL + + H Sbjct: 627 NGYDCQEVQGYLFSKPLSSDDFLMYLKAH 655 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 90/447 (20%), Positives = 168/447 (37%), Gaps = 24/447 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 + +Y ++L +T I DG++ + Sbjct: 249 ENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKNINDTLGHT 308 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGII 196 + + + D++ +I + + + + Sbjct: 309 LGDELLGSFAQR----LRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVFSILQ 364 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 Q I I P + +II A + + K R + Sbjct: 365 QPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNHYQIYHP----- 419 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + + L A+E +HYQP +++ N I G EAL RW Sbjct: 420 -----LITSKTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLG 474 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 +SP FIP+A+++GL + ++R E W ++ P +++NL + Sbjct: 475 LVSPAKFIPIAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFV 534 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ ++ + P+ + LE+TE + + S I+ + G I +DDFGTGYSSL Sbjct: 535 NIVTKILAETNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLG 594 Query: 433 YLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ + + +KID+SF+ L+ K + ++ + + ++++AEG+ET Q E LR+ Sbjct: 595 YLKQIPFNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRK 654 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 QG+ +SK L E + H Sbjct: 655 LECEEMQGFKFSKPLKPEAAANFLSNH 681 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 107/514 (20%), Positives = 202/514 (39%), Gaps = 39/514 (7%) Query: 14 LILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAA 73 L + +++P+ ++ + ++ S +D + R + ++ ER Sbjct: 612 LAVGIVVPMAVTDSITALELLGSNPYAIDAQTQESL-RVIALQIAQYKQRKQAERSLRFM 670 Query: 74 CSEAHLMEM-RRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWL 132 S L + R + + + + + + D ++ Sbjct: 671 ASHDGLTGLFNRAALQHELARAIKR-------------SNRHQKQFAVIFVDLDRFKHIN 717 Query: 133 TSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDE 190 + + G ++ + DV+ ++ N + N +++ Sbjct: 718 DTLGHGVGDEMIKICGERLTALLREA----DVVARFGGDEFVLLLENLSSANDAAGLAEK 773 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIWLP 248 + E + + I P +++ A T M K R F + Sbjct: 774 VLACCAEPFFLAGRELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRNTFRFYA 833 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + L+ A+E ++ +HYQP + L +IVG EAL RW Sbjct: 834 AKMNAQ----------NTEQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRW 883 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 + P FIP+A++ GL L + D W + P+ +S+NL Sbjct: 884 HHPILGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQF 943 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 S + ++ ++ + P + LE+TE +P+ +A ++ R+ G + +DDFGT Sbjct: 944 ESRTLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGT 1003 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPH----IIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYL+ + +KID+SF++ L II +A L++K+VAEGIET+ Q Sbjct: 1004 GYSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQ 1063 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 ++LR HG QG+ K +P ++ + +HL Sbjct: 1064 LDYLRSHGCDEAQGYWLCKPVPADEVRNFMARHL 1097 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 107/455 (23%), Positives = 179/455 (39%), Gaps = 36/455 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +R ++ + L H + D + D ++ S Sbjct: 654 EAEARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHDDRCAVLFLDLDDFKTVNDSLG 713 Query: 137 DLGIIRYMV--------AMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + + V I F+ ++ + + Sbjct: 714 HAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSRLAHAE----------EPARVA 763 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIW 246 + + + LQ I + P I +++ A T M K R + + Sbjct: 764 ERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKESGRNAYRF 823 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + + R L+ AIE+ D+ +HYQP + A+G++ G EAL Sbjct: 824 FLPEMT----------QRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALV 873 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW + L PD F+P A+Q+GL PL ++R W P +++N+ + Sbjct: 874 RWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISAL 933 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDF 424 + ++ +P +I LE+TE D + G + LDDF Sbjct: 934 QFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLALDDF 993 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYL+ L + LKID+SFVD L E +T + +A+ L +++VAEG+ET Sbjct: 994 GTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETE 1053 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 Q +L + G QG+L+S+ L E+F W E+ Sbjct: 1054 DQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFEEQ 1088 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 105/454 (23%), Positives = 178/454 (39%), Gaps = 36/454 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 E+++++Y L I D +H Sbjct: 503 EREIKQLAYYDSLTGLPNRALFEDRFRRVLTTADRAGKMAALLFIGVDNLNSINDTHGHT 562 Query: 139 GIIRYMVAMG--------TAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 + + +G VV + F+ ++P S A T + + Sbjct: 563 YGDKLLKVIGQRLVAVAQNGATVVRWEGDKFVVLLPGLSDAETAD----------TVARQ 612 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLP 248 I Q I + I + P + ++ A M K R + Sbjct: 613 ILQSIAEPCEVDDQSFFVTASIGGAVYPQHGADGDKLLKNADMAMYASKELGRNTYCTFT 672 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + R + H L+ A+ + + YQP V A GK++G+EAL RW Sbjct: 673 EEMN----------RRVLERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRW 722 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 + +SP FIPLA+++GL P+ ++++ W P I++NL + Sbjct: 723 RHAEKGMISPGQFIPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQF 782 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + ++ +++PR + LELTE D + + R+ G I +DDFGT Sbjct: 783 QQPDFFDQVAQVLKDTELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGT 842 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYL+ +D +KI + FV + + +I MA L L +VAEG+ET Q Sbjct: 843 GYSSLSYLKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQ 902 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 E+LR QG+ + + +P E+F+ + ++L Sbjct: 903 LEFLRARRCQVMQGYYFGRPMPAENFIEYLSENL 936 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 108/505 (21%), Positives = 199/505 (39%), Gaps = 34/505 (6%) Query: 25 SIWLAHQQVETSFIEEL-----DTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHL 79 SIW+ E I+ +V R ++ + +E++ Q Sbjct: 270 SIWIVMDVSERLRIQRQLAGMHGELEQQVRDRTRELQETVGNLHREIQDRQ------RDQ 323 Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 + +++ + + ++ + D ++ S Sbjct: 324 ERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRI 383 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAII-GNAHNVVITSSDEIAQGIITR 198 +V + + D + ++ G + ++ + + Sbjct: 384 GDALLVEIAQR----LRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQP 439 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLL 256 + E + + P + ++I A T M K R F + + Sbjct: 440 VHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQ-- 497 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 R + L+ A+E + +HYQP VS+A G++ G EAL RW + + Sbjct: 498 --------SARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAV 549 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQL 375 SP FIP+A+ TG P+ ++R+ + W Q P +++NL + ++ +L Sbjct: 550 SPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQLLEL 609 Query: 376 LRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + ++ Y V P + LELTE ADP + + + G + +DDFGTGYSSLS+L Sbjct: 610 VDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHL 669 Query: 435 QDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + + LKID+SFV L+ + + II MA+ L ++ AEG+ET+ Q +LR+ G Sbjct: 670 KRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQG 729 Query: 491 VHYGQGWLYSKALPKEDFLRWAEQH 515 QG+ +S+ L ++ Q Sbjct: 730 CDEAQGFYFSRPLGAPHLQQYLLQR 754 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 116/496 (23%), Positives = 195/496 (39%), Gaps = 52/496 (10%) Query: 29 AHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYS 88 QQ F+ ++ S V + E +R A +A R + Sbjct: 228 GAQQSVELFLAPVENESGDVTHFIGVLNDVTARTHAE-KRLIHQASHDALTGLPNRNLLN 286 Query: 89 YRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG--------I 140 R +A + D +++ S+ Sbjct: 287 DRITHAIARSRG---------------RLTAVMFLDLDRFKLVNDSYGHAVGDALIREVA 331 Query: 141 IRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQ 200 R + V + F+ ++ + DAA + ++ + ++ Sbjct: 332 NRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAA----------RLAAKLRDRLSESVR 381 Query: 201 KTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAA 258 E + I + P + ++ A M K R + + + Sbjct: 382 IGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEM------- 434 Query: 259 MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP 318 RR + L+ A+ ++ HYQP V LA G + GAEAL RW + L P Sbjct: 435 ---DHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLP 491 Query: 319 DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLR 377 FI +A++TGL PL ++R+ W P +++NL + + + Sbjct: 492 GEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVC 551 Query: 378 DMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQD 436 D++ + Q+ LE+TE AD S ++ R G + +DDFGTGYSSLSYL+ Sbjct: 552 DILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKR 611 Query: 437 LDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVH 492 +D LKID+SF+ + + + II MA++L+L ++AEG+ET Q E+L G Sbjct: 612 FPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCR 671 Query: 493 YGQGWLYSKALPKEDF 508 GQG+L+ +A+P EDF Sbjct: 672 SGQGFLFGRAMPAEDF 687 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 107/445 (24%), Positives = 179/445 (40%), Gaps = 23/445 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +++ ++ S+ + D +++ S Sbjct: 624 EEQLQHLATHDNLTGLANRALLQDRLEQSILFAKRSGRLVAALLLDLDRFKIINDSLGHS 683 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGII 196 R + + + D + ++ V + +I I Sbjct: 684 FGDRLLQIAADR----LRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRIT 739 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQKGWHRQVFIWLPLGLVIGL 255 Q E + I P + ++I A M Q F + I + Sbjct: 740 APFQIADREITVTASLGISIYPQDGEDEETLIRNADIAMYQAKEEGNAFRLYAPEMNIVV 799 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 A L+ A++ ++ +HYQP + L +GKI GAEAL RW Sbjct: 800 HEA----------MEMETDLRRALDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGM 849 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQ 374 ++P FIPLA++TGL P+ ++ ++ + W Q I+ NL + ++++ Sbjct: 850 IAPGMFIPLAEETGLILPIGEWVLENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIA 909 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 ++ ++ + P + LELTE + +T+A + G + LDDFGTGYSSL+Y Sbjct: 910 TIQRILQDTGLPPHLLELELTESMIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNY 969 Query: 434 LQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ VD LKID+SF+ + V II +A +L L+ VAEG+ET +Q E+LRQ Sbjct: 970 LRRFPVDCLKIDRSFISDVADDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQC 1029 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQ 514 QG+LYS L E+F Q Sbjct: 1030 ACDSYQGYLYSAPLAVEEFTAMLRQ 1054 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 187/453 (41%), Gaps = 36/453 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +++++Y L + D ++ S Sbjct: 235 EEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHA 294 Query: 139 --------GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R ++ + V + F+ ++P + D V+ + Sbjct: 295 CGDVLLSTVAGRIASSIRESDTVARLGSDEFVVILPGVGHEED----------VVAVVRK 344 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLP 248 I + + + + I I P + ++ A M K + + + Sbjct: 345 IVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYS 404 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 L + + L+ A+E R+ +HYQP++ + +G+IVG EAL RW Sbjct: 405 SELNHRAME----------RLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRW 454 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVL 367 + +SP FIPLA++TGL P+ ++RS E + + +S+N+ + Sbjct: 455 DSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQF 514 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGT 426 + ++ ++ ++PR + LELTE + +T+ I+ + ++ G + +DDFGT Sbjct: 515 RHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGT 574 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYL+ +D LKID++FV + + + I+ +A L L +VAEG+ET++Q Sbjct: 575 GYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQ 634 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +L QG+ ++ LP + L + E Sbjct: 635 LAFLAALRCDVVQGYHIARPLPPRNLLEFLEAR 667 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 96/493 (19%), Positives = 195/493 (39%), Gaps = 24/493 (4%) Query: 31 QQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYR 90 Q E ++ ++ + R + V E + M++ ++ + Sbjct: 222 YQDENGENVSVEKTATLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDT 281 Query: 91 YIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTA 150 S + + + D ++ + + + + Sbjct: 282 LTGLPQRDFFFDLLHSHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQR 341 Query: 151 HYVVMIDPASFIDVIPYSSWQIDAAII--GNAHNVVITSSDEIAQGIITRLQKTPGEHIE 208 + + D + S + + + V + + I ++ Sbjct: 342 ----LQNNIRITDNLSRMSGDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHL 397 Query: 209 NNGIIYDILP-LPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILR 266 I + P +++ A + M K R F + + + Sbjct: 398 TASIGISLFPGDATSPEKLLSCADSAMYRAKESGRDAFRFYKPHMN----------EKAQ 447 Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 + L+ AIE + +HYQP L G++VG EAL RW + + P FIP A+ Sbjct: 448 GLLWLETELRLAIEQEQLELHYQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGEFIPQAE 507 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQV 385 +T L PL ++ + + W +++N+ + + Q++ +++HY + Sbjct: 508 ETSLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGL 567 Query: 386 NPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKI 444 + LE+TE D + +A +++ G ++ +DDFGTGYSSLSYL+ + LKI Sbjct: 568 PATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKI 627 Query: 445 DKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYS 500 D+SF++ + + II +A + ++++AEG+ET +Q +L++H YGQG+L++ Sbjct: 628 DRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFN 687 Query: 501 KALPKEDFLRWAE 513 + LP +D R + Sbjct: 688 RPLPAKDIERQLK 700 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 93/500 (18%), Positives = 193/500 (38%), Gaps = 41/500 (8%) Query: 25 SIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRR 84 + + + + + + +++ + K+ ELE ++R Sbjct: 611 AQGFLFVASDITERKRAED---ALLRSRDELELRVKERTSELESEVLER--RRIESKLRY 665 Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL------ 138 +++ ++++ + DT I D ++ S Sbjct: 666 LAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGDTLL 725 Query: 139 --GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 R + + + + F+ ++P + + A + + +I + Sbjct: 726 KNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKL----------ASKILDALR 775 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 ++ E I P + + +++ A T M Q K R + + + Sbjct: 776 PPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAA 835 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 L+ A++ + V YQP++ L +I EAL RW Sbjct: 836 ----------ADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKG 885 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI-SINLESPVLTSEKIP 373 + P FI +A+++GL + +++R + W+ + I ++NL + Sbjct: 886 LVGPAQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLT 945 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + + ++ Y + P +I LE+TE D + + + G + +DDFGTGYSSL+ Sbjct: 946 EGICRILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLA 1005 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ VD LKID+SF+ + + + I+ +A +L L ++AEG+ET +Q + L Sbjct: 1006 YLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSA 1065 Query: 489 HGVHYGQGWLYSKALPKEDF 508 ++ QG+ +K +P E Sbjct: 1066 LNCNFAQGYYMAKPMPAEMI 1085 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 97/443 (21%), Positives = 180/443 (40%), Gaps = 20/443 (4%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ +++ I ++ + + + D ++ S Sbjct: 499 ERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRLALLLLDLDRFKTVNESLGHSA 558 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 + + ++ P + + I +I + + ++ + + Sbjct: 559 GDTLL-QVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALA-AERVRDVFANPI 616 Query: 200 QKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLA 257 + I + P + +++ A M K R + + L Sbjct: 617 ELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNA---- 672 Query: 258 AMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLS 317 R I + +L+ A+E + +HYQP V + +G+IVGAEAL RW L Sbjct: 673 ------RAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLG 726 Query: 318 PDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLL 376 P FI +A++ G + +I + +W R P+ ++INL + + + Sbjct: 727 PVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQV 786 Query: 377 RDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQ 435 + + + + +E+TE D + + I + G + +DDFGTGYSSLSYL+ Sbjct: 787 KQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLK 846 Query: 436 DLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGV 491 D LKID+SFV + + + II MAK L +++VAEG+ET +Q ++L Q G Sbjct: 847 RFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGC 906 Query: 492 HYGQGWLYSKALPKEDFLRWAEQ 514 + QG+L +K LP +DF + Sbjct: 907 DFVQGYLIAKPLPADDFAELLHK 929 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 96/451 (21%), Positives = 176/451 (39%), Gaps = 36/451 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ ++ + +L D I D +++ S Sbjct: 354 EAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFG 413 Query: 137 DLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R +G + + F ++ ++H+ + + Sbjct: 414 HQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGF----------DSHHQLADMA 463 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIW 246 +I + L E I + P + +++ A M K + + + Sbjct: 464 SDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRAKEAGKNTYQF 523 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 +G+ + L+ A+E + +HYQP +S + GAEAL Sbjct: 524 FDIGMNTQTFE----------RLLLENGLRMALERHEFELHYQPQLSAGERALAGAEALL 573 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESP 365 RW + P FI LA++TGL +P+ ++R + W Q + +++NL Sbjct: 574 RWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPR 633 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDF 424 +P + + + ++ LE+TE P + ++S + G + +DDF Sbjct: 634 QFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDF 693 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLS+L+ +D LKID+SFV+ L + I+ MAK LK ++VAEG+E+ Sbjct: 694 GTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESE 753 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 +Q +L G H QG+ + + LP +F Sbjct: 754 EQAAFLEGKGCHVLQGYHFGRPLPAGEFAAL 784 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 107/441 (24%), Positives = 186/441 (42%), Gaps = 36/441 (8%) Query: 83 RRVSYSYRYIQEVAY-IDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGII 141 RV + R Q +A + N KI++ R + Sbjct: 349 NRVLFRNRLNQAIARNHEGNHV-------VLLFIGLDRFTKINESLGREIGDNTLTQAAE 401 Query: 142 RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQK 201 R+ + + + F ++ DAA ++ ++ + +I + Sbjct: 402 RFHNCLAENQILARLGGDEFAVIMEDCRHPQDAA----------KTAKKLLEQLIEPIHV 451 Query: 202 TPGEHIENNGIIYDILP-LPEMNISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLLAAM 259 P E I P E ++++ A M K + + + + Sbjct: 452 QPNEIYLTASIGISSYPQDGESPKTLMSHADIAMTRAKSEGKDRYQFFEREMT------- 504 Query: 260 FVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPD 319 + +R+ + L+ A+ ++ V+YQP + L + +I G EAL RW +SP Sbjct: 505 ---QTTKRVFELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRWQHPQRGLISPA 561 Query: 320 SFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRD 378 FIPLA++TGL + ++R + + W Q P +++NL + + + + Sbjct: 562 DFIPLAEETGLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAK 621 Query: 379 MINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDL 437 + +NP + LE+TE D S + E G + +DDFGTGYSSLSYL+ Sbjct: 622 TLKETGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYF 681 Query: 438 DVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHY 493 + LKIDKSF++ + + +I +A +L LK+VAEGIE Q ++L + H Sbjct: 682 PLTKLKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQ 741 Query: 494 GQGWLYSKALPKEDFLRWAEQ 514 GQG+L+S+ +P ED + Q Sbjct: 742 GQGFLFSRPVPAEDMEQLLRQ 762 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 97/452 (21%), Positives = 180/452 (39%), Gaps = 37/452 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 ++R +SY +E + + D ++ S Sbjct: 527 EAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKTINDSLGHS 586 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R G +V F+ ++ + ++ Sbjct: 587 VGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILAD-----------SDAVRAARVANA 635 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLP-EMNISIITWASTKMLQ-KGWHRQVFIWLP 248 + I I + + P + S+I A M K R + + Sbjct: 636 MISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRNTYQFFS 695 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + + + + L A+ N + ++YQP + + + +++G EAL RW Sbjct: 696 AEMSA----------VATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRW 745 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVL 367 + W+ P FIPLA++TG+ + ++ +W +++NL L Sbjct: 746 RHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQL 805 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + P+ + +++ ++ P + LELTE D + ++ + +E G +DDFGT Sbjct: 806 QKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGT 865 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSL YL VD LKID+SF+ + ++ +T II +AK L LK+VAEG+ET++Q Sbjct: 866 GYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQ 925 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 E+L + G QG+ +S+ +P ++ W + Sbjct: 926 LEFLERAGCDGAQGFYFSRPVPADEIAGWLSR 957 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 100/440 (22%), Positives = 177/440 (40%), Gaps = 20/440 (4%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 EM +++Y + + L+ + D +++ S Sbjct: 536 EQEMTQLAYYDKDTGLPNRLKFMEELDDLLQKAKKKKRPLAVLFMDIDRFKLINDSLGHY 595 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 + + + ++ P SF + + A ++ + V S+ I Q I + Sbjct: 596 AGDQILRQIA-GRIEAILPPGSFFGRFSGDKFTLILAKEADS-SRVTKLSNHILQAISSP 653 Query: 199 LQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKM-LQKGWHRQVFIWLPLGLVIGLL 256 + E I + P +++ A M K + + L Sbjct: 654 VYYGEQEFFITGSIGASLYPGDGHEKETLMKNADIAMNRSKHQGGNRLTYYSTEMNEQTL 713 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 L+ A++ ++ + YQP+ +L G I G+EAL RW + Sbjct: 714 L----------KLELESYLRKALQKKEFFLCYQPLTNLETGAIYGSEALIRWNHPKLGLV 763 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQL 375 SP FIPLA++TGL + ++++ +W + +S+N+ Sbjct: 764 SPGDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGLGSLTVSVNVSVHQFQQPGFVHK 823 Query: 376 LRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + ++ + P+ + LELTE + + S +I + G + +DDFGTGYSSLSYL Sbjct: 824 VLQVLKETMLEPQFLVLELTESSMLRNMENSILVIQELQRNGIRVAIDDFGTGYSSLSYL 883 Query: 435 QDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + L +D LKID+SF+D L + II M L +K+VAEG+ET++Q L+ Sbjct: 884 KHLPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVKVVAEGVETAEQMRLLKDLK 943 Query: 491 VHYGQGWLYSKALPKEDFLR 510 H+ QG+ + L E F Sbjct: 944 CHFAQGFFIHRPLGAEQFEE 963 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 110/461 (23%), Positives = 194/461 (42%), Gaps = 29/461 (6%) Query: 63 LQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGK 122 ++++ + A + HL +Y +L + Sbjct: 582 VEDINERKNAEATIEHL------AYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVALMY 635 Query: 123 ISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--A 180 + D ++ S + M V+ D DV+ A I+ + Sbjct: 636 LDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDD----DVVCRLGGDEFALILHDIHQ 691 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KG 238 V+ + ++ + + + E + I + P ++ ++ A + K Sbjct: 692 DQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDGGDVKNLEKHADIALYHAKE 751 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 + F + L + + L+ A E +++ +HYQP V +A+GK Sbjct: 752 EGKNTFRFYLEELNSTIST----------RIALEQGLRYAKERQELELHYQPKVCVASGK 801 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI 358 + G EAL RW D +SP FIPLA+QT L P+ ++R+ W Q ++ Sbjct: 802 VSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQWREQGLLLNM 861 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGH 417 ++NL + L S + + + +I+ + P + LELTE +P ++ R R G Sbjct: 862 AVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQLLERLRTLGC 921 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMV 473 I +DDFGTGYSSLSYL+ V ILKID+SFV L + + ++++A L +K V Sbjct: 922 SISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVDLANNLDMKTV 981 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 AEG+E+ +Q L+Q G Y QG++YS+ + + + Sbjct: 982 AEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVRR 1022 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 99/420 (23%), Positives = 168/420 (40%), Gaps = 35/420 (8%) Query: 108 LEHESPPDTFPEPGKISKDGYRVWLTSHND--------LGIIRYMVAMGTAHYVVMIDPA 159 LE D ++V + L R MVA G + V + Sbjct: 219 LEGARHRRGVLALLVFDLDDFKVINDTLGHDVGDKLLHLVAQRLMVAAGKKNTVYRVGGD 278 Query: 160 SFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPL 219 F ++ + + + N + + + I I P Sbjct: 279 EFAMMLDQPADVENVEAVANRF----------IRALAPPIVLNDRNFYIGVSIGASIYPY 328 Query: 220 PEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQD 277 + + ++ A M K + F + L+ Sbjct: 329 DGEDAAHLLRDADAAMYYAKSRGKNNFQMFSAEM----------HHKSSTRLLLETELRV 378 Query: 278 AIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLL 337 A+E + ++YQP SL + K+VG EAL RW L P SFIP+A++TGL + Sbjct: 379 ALEEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSFIPVAEETGLIVRIGEW 438 Query: 338 IIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 ++R +W +S+NL E + Q + +I ++ + LE+TE Sbjct: 439 VLREACRQAMEWKALGVPLRMSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLELEITET 498 Query: 398 EFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK- 455 D + + ++ + G + +DDFGTGYSS++YL+ V LKID+SF+ + Sbjct: 499 VLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFPVSRLKIDRSFIRDIPNDP 558 Query: 456 ---NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +T I+MA +LKL++VAEG+ET Q ++LR+ G QG+L+S+ + + Sbjct: 559 DDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRPVSAREMAELV 618 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 113/449 (25%), Positives = 185/449 (41%), Gaps = 35/449 (7%) Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 + RV + R I EV + + S L + + KI D + Sbjct: 512 DPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDL------DRFKIINDTLGHGVGDE 565 Query: 136 NDL-GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQG 194 L R + ++ + V + F ++P DAA + ++ I Sbjct: 566 LLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAHV----------AETIINQ 615 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLV 252 + E I + + + A M K + + + + Sbjct: 616 LQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGKGTYKFFTPDMN 675 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 I + L+ A++N+++ +HYQP V + +IVG EAL RW Sbjct: 676 IQNA----------KRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPT 725 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEK 371 + P FIPLA++TGL PL L++ + W PQ +++NL Sbjct: 726 RGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPN 785 Query: 372 IPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + + + +++ + LE+TE D + + + ++ G I +DDFGTGYSS Sbjct: 786 LIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSS 845 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 LSYL+ + LKID+SFV L + ++ II MAK + L +VAEG+ET++Q E+L Sbjct: 846 LSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFL 905 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 R QG+ SK LP DFL E+ Sbjct: 906 RGQECQQVQGFFLSKPLPPSDFLALLERQ 934 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 99/443 (22%), Positives = 175/443 (39%), Gaps = 24/443 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ +S + + +L + + + +R+ + Sbjct: 415 ERIQYLSSYDTLTELPNRHLFDDRLNQALLTARRFERGTALILLDLNRFRLINDTLGPPA 474 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA--HNVVITSSDEIAQGIIT 197 +V + + + + D + + ++ N + + + I Sbjct: 475 GDEILVEVTRRLKLQVREG----DTVGRRAGNEFGFVMANLSHERDALALAQRMLDAISV 530 Query: 198 RLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 I + P E +++ A +L K R F + + Sbjct: 531 PFSVAGQSVAITASIGISVFPKNGENGEAMLRSADAALLRAKQSGRNTFSFYSPEMDAD- 589 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 R S L+DA+ + CVHYQP VSL +G ++G EAL RW Sbjct: 590 ---------AARRLSIESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGP 640 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQ 374 +SP FIP+A++TGL + ++R+ WL H+++NL +P Sbjct: 641 ISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPA 700 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + + + + LE+TE F D + + S+ + G ++ LDDFGTGYSSL+Y Sbjct: 701 QVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAY 760 Query: 434 LQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 + D +KID+SFV + + I M ++L L ++AEG+ET Q +LR Sbjct: 761 VSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSR 820 Query: 490 GVHYGQGWLYSKALPKEDFLRWA 512 QG+L+S+ LP E+F Sbjct: 821 RCDAIQGYLFSRPLPPEEFAPLL 843 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 112/508 (22%), Positives = 185/508 (36%), Gaps = 39/508 (7%) Query: 27 WLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS 86 W LD I+ + A+ + A E++R++ Sbjct: 1010 WAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDAILAIDTDIGQRKAT-----EREIQRLA 1064 Query: 87 YSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND--------L 138 + + +L I D ++ + Sbjct: 1065 FYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHDQGDVLLQQ 1124 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 R + + V + F+ +I S G T ++I + T Sbjct: 1125 VAARLNTCVRSVDTVARLGGDEFVVMIEGLS-----THPGELAMSARTVGEKILAVLATP 1179 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNI--SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 + I + ++ A M Q K R + G+ + Sbjct: 1180 YVLQGYHYRSTPSIGVAPFGDGRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQAVV 1239 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 A + L+ A+ +HYQP + G + G EAL RWP Sbjct: 1240 TA----------RAELENDLRTALAREQFMLHYQPQID-RRGSVTGVEALVRWPHPQRGM 1288 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH--PQQHISINLESPVLTSEKIP 373 +SP FIPLA++TGL PL ++ + + W +++N+ S E Sbjct: 1289 VSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFV 1348 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + + I ++ LELTE F D +T+ ++ R G LDDFGTGYSSLS Sbjct: 1349 EDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLS 1408 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ + +D LKID+SFV L + II ++++L L ++AEG+ET++Q L Q Sbjct: 1409 YLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQ 1468 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQHL 516 G QG+ +S+ LP+ + Q L Sbjct: 1469 AGCRAYQGYFFSRPLPETALEDFLVQKL 1496 >UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q2BCE5_9BACI Length = 744 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 98/445 (22%), Positives = 179/445 (40%), Gaps = 25/445 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 M +++ N + + D +++ + Sbjct: 314 KSERTMEYMAFYDTLTGLPNR---NEIMKQLQGILNSGKEKAAVLFLDLDRFKIINDTKG 370 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE-IAQGI 195 + + + D + ++ + I + I + Sbjct: 371 HSTGDLLL----KKAGIRLEDTVGSLGLVARQGGDEFIILFEEKEKQQIEGAARAIIEQF 426 Query: 196 ITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVI 253 E I + P + ++I A T M K + F + L Sbjct: 427 NKPFILEGEEFYITPSIGISLYPEHGTDQETLIKHADTAMYLAKERGKNNFQFYTSSL-- 484 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 + R + + L+ A++ ++ +HYQP + L GK+ G EAL RW + DG Sbjct: 485 --------EGLASRKMALENGLRKALDRGELLLHYQPQIDLKTGKLKGTEALVRWQRPDG 536 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKI 372 + P FIPLA++TGL P+ I+R+ E W + I++N+ L + Sbjct: 537 HLVPPGEFIPLAEETGLIVPMGKWILRTACEQHKRWKLEGAGSVPIAVNISVRQLEDPEF 596 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ +++ + P + LE+TE + + + ++ ++ G + +DDFG GYSSLS Sbjct: 597 IMYVKTVLSSCDIEPGCLELEITESIMQNIEKATIALNELKKIGIRLSIDDFGKGYSSLS 656 Query: 433 YLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ L +D +KIDKSFVD + + II+M L +VAEGIE +Q E+L + Sbjct: 657 YLKHLPIDTIKIDKSFVDDILDPAQNGSLVKAIIDMGLNLNFSVVAEGIEHKEQAEFLLE 716 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAE 513 + GQG+ +S+ + E F + + Sbjct: 717 NNCPVGQGYYFSRPVTGEVFKEFIK 741 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 97/425 (22%), Positives = 179/425 (42%), Gaps = 30/425 (7%) Query: 106 SSLEHESPPDTFPEP-----GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS 160 S L EP D ++ S + + V + P Sbjct: 674 SLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARR-LVARVRPG- 731 Query: 161 FIDVIPYSSWQIDAAIIGNAHNVVI--TSSDEIAQGIITRLQKTPGEHIENNGIIYDILP 218 D + ++ + V+ ++++ + + + + + + P Sbjct: 732 --DTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFP 789 Query: 219 LPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 + ++ A + K R + + + + H L+ Sbjct: 790 RDGNDCDALLRHADAALYHAKSRGRNTYRFFTREI----------DDRVSEYLHIEHGLR 839 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 A+E + +HYQP V +A G++VG EAL RW + +SP F+P+A++TGL P+ + Sbjct: 840 SALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGM 899 Query: 337 LIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 +IR W R +++NL S + + + + + ++PR + +E+T Sbjct: 900 WVIREACRQAMLWRRAGLRPMTMAVNLSGRQF-SRSVIEAIDEALADSGLDPRWLQVEVT 958 Query: 396 EREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY 454 E D + + ++ R G + +DDFGTGYSSL+YL+ +D LKID+SF+ ++ Sbjct: 959 ESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDL 1018 Query: 455 KN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + II MA L++K++AEG+ET Q ++LRQ G QG+L S+ P + Sbjct: 1019 DEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQ 1078 Query: 511 WAEQH 515 W + Sbjct: 1079 WMLER 1083 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 97/454 (21%), Positives = 182/454 (40%), Gaps = 28/454 (6%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 ++R ++Y +L + D + D +++ + Sbjct: 259 EEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLFLDLDRFKLVNDTLGHG 318 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA--HNVVITSS 188 R + + + D ++ ++ + V + Sbjct: 319 VGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEFTIMLSDIEHFQDVAKIA 378 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIW 246 I + + E + I + P +I A M Q K R + Sbjct: 379 RRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASDLIRNADGAMYQAKEQGRNGYQI 438 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + L +L A++ + V+YQP VS +G++VG EAL Sbjct: 439 YDESMNAKALE----------RIILESQLHKALKEEEFIVYYQPQVSNQSGRVVGIEALV 488 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW + + P F+PLA++ GL + ++R WL P ++IN+ Sbjct: 489 RWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVTLAINISGQ 548 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 ++ + + ++ ++P + LELTE + + + + G + +DDF Sbjct: 549 QFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMGVRLAIDDF 608 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTG+SSLSYL+ +D+LKID++F++ + + +T IEMA T+KLK++AEG+ET Sbjct: 609 GTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKVIAEGVETK 668 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 Q ++L ++G QG+L+SK +P + R + Sbjct: 669 PQLDFLTKNGCDMYQGYLFSKPVPSTELPRLFNR 702 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 96/444 (21%), Positives = 175/444 (39%), Gaps = 24/444 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +R ++Y + L H + + D ++ S Sbjct: 420 ETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLG 479 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 + +V + + D D + ++ N + T + + Sbjct: 480 HAVGDKLLVEIAARLRASLRDD----DTVARMGGDEFLVVLNNLSGPDEAATMARRMVAE 535 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLV 252 + + E + + + P + +++ A M K R F + Sbjct: 536 LRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMN 595 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 L + L A+ ++ +++QP++ G++V EAL RW D Sbjct: 596 ARSLE----------RLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHPD 645 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEK 371 +SP FIPLA+ TGL P+ ++RS E W H+ +N+ + E Sbjct: 646 LGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEG 705 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 ++ ++ + P + LELTE D + + R G + +DDFGTGYSS Sbjct: 706 FAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSS 765 Query: 431 LSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ +D LKID+ FV ++ + I+ + +L L++VAEG+ET+ + L Sbjct: 766 LAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVL 825 Query: 487 RQHGVHYGQGWLYSKALPKEDFLR 510 R+ G QG+ +S LP E+F++ Sbjct: 826 RRQGCDLAQGFHFSPPLPWEEFVK 849 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 103/452 (22%), Positives = 171/452 (37%), Gaps = 36/452 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ +++Y + + + I D ++ S Sbjct: 829 ETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLG 888 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + T+ V + F ++P N V + Sbjct: 889 HDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVILPGIE----------QTNDVARIA 938 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIW 246 I + + E I + P + ++ A T M K R + + Sbjct: 939 GAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYRAKEEGRGTYKF 998 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + I R S L+ A+E + +HYQP V + +I G EAL Sbjct: 999 FTSDMN----------EINGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALV 1048 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESP 365 RW + +SP FIP+A++TGL + +++ D R ++INL + Sbjct: 1049 RWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAK 1108 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 + L + + P + +E+TE D + I R G ++ +DDF Sbjct: 1109 QFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDF 1168 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYL+ L ++ LKIDKSF+ L + + I+ MA L L +VAEG+E Sbjct: 1169 GTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQ 1228 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 Q +L + QG+ +SK LP E F ++ Sbjct: 1229 AQIHFLCEKECPTIQGYFFSKPLPFEAFEKFL 1260 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 101/446 (22%), Positives = 181/446 (40%), Gaps = 23/446 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A +R+++Y L I D ++ S Sbjct: 248 AAEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRAATLMFIDLDRFKTVNDSLG 307 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN-AHNVVITSSDEIAQGI 195 L + + G + D D + + + + +++I + Sbjct: 308 HLMGDQLLRLAGQR----LRDSVRLSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEVF 363 Query: 196 ITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVI 253 E + I P + +++ A M Q K R F + + Sbjct: 364 AAPFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRNGFRMFSIEMNA 423 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 +L ++ +L+ A+++ + + YQP+V +A+G+IVGAEAL RW Sbjct: 424 PILESLL----------LETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQH 473 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKI 372 +SP FIP+A+++GL P+ ++ + W P +++NL + I Sbjct: 474 GEISPVRFIPVAEESGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSALQFERLNI 533 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 + +++HY + + LELTE D + + + + G + +DDFGTGYSSL Sbjct: 534 SNTVLRLLDHYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSL 593 Query: 432 SYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 +YL L + LKID+SFV + V I+++A++L L+++AEG+E Q LR Sbjct: 594 AYLTRLPLAKLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLR 653 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAE 513 + QG+LYS+ +P F Sbjct: 654 EWCCDQAQGYLYSRPVPARAFEALLR 679 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 102/445 (22%), Positives = 181/445 (40%), Gaps = 21/445 (4%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++R+++ + + E + D ++ S Sbjct: 547 EAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLG 606 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 +VA+ +I P + + + + + + + + Sbjct: 607 HRIGDILLVAVARR-LQSLIGPQDTVSRLG--GDEFLLLLPATSAAHAAKVASALLTAVA 663 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 Q P E + + P + ++ A M K R + + L Sbjct: 664 QPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQAR 723 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 R + L+ A+E + +HYQP VSL G++VGAEAL RW + Sbjct: 724 TA----------RALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELG 773 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEKIP 373 ++P FIP+A+ +G L ++ + D WL +S+NL + ++P Sbjct: 774 VVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLP 833 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 +++ + + R++ LELTE DP + ++ + + G + +DDFGTGYSSLS Sbjct: 834 EMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLS 893 Query: 433 YLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 L+ + LKID+SFV L+ + II MA+ L ++ AEG+ET Q ++LR Sbjct: 894 CLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRA 953 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAE 513 G GQG+L+S+ LP + F + Sbjct: 954 QGCDEGQGYLFSRPLPADAFEAYLR 978 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 174/453 (38%), Gaps = 37/453 (8%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ +++ ++ ++ + D ++ S Sbjct: 610 ETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVNDSLG 669 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + A+ + + F+ V+P G + + Sbjct: 670 HGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLP-----------GTDTDGAAYLA 718 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIW 246 + + + E I + P + ++ A M K R + + Sbjct: 719 ERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCF 778 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + R + L+ A+E + YQP +SL +IVG EAL Sbjct: 779 FTTEMQA----------RSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALI 828 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESP 365 RW PD FIP+A+ G P+ ++++ + W IS+NL + Sbjct: 829 RWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAV 888 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTERE-FADPKTSAPIISRYREAGHEIYLDDF 424 ++P+L+ ++ V+P + LELTE +P + +I R+ G I +DDF Sbjct: 889 QFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDF 948 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSL+YL+ +V LKID+SFV L + +I +A +L + VAEG+ET Sbjct: 949 GTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETK 1008 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +Q E+LR G QG+ S+ L + + E Sbjct: 1009 EQLEFLRSRGCTEIQGYYLSRPLQADAVFSFIE 1041 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 96/477 (20%), Positives = 195/477 (40%), Gaps = 23/477 (4%) Query: 43 TYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNV 102 +S+ + +G + E+ ++ + +++ +Y + Sbjct: 468 DHSNFPVEYVTSLIKEGDKVVGEVITFKDITQRKQLEEKIKYHAYFDSLTDLPNRVLLID 527 Query: 103 PQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFI 162 L++ + D +++ S + ++ + + Sbjct: 528 RLTQGLKYAKVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKR-LSACVPEDA-- 584 Query: 163 DVIPYSSWQIDAAIIGNA--HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-L 219 + + N N ++ + I E I + P Sbjct: 585 -TVSRQGGDEFTIYLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGISLFPKN 643 Query: 220 PEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 + ++I A T M + K + + G+ + + L A Sbjct: 644 GDTTETLIKNADTAMYKSKETPGTSYHFFSEGMDTRTFES----------IKLENDLYKA 693 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 +E ++ + YQP ++ KI G EAL RW + ++PD FIPLA++TGL P+ + Sbjct: 694 LERDELIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWV 753 Query: 339 IRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 ++ + + +W Q +S+NL + ++ +++ ++P + LELTE Sbjct: 754 LKEACKQLKEWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETDLSPEYLQLELTEN 813 Query: 398 EFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL---E 453 + + + +++ G + +DDFGTGYSSL YL++L + LKIDKSFV + + Sbjct: 814 LIVKNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTDD 873 Query: 454 YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 +T II +A+ LKL+++AEG+ET +Q ++L + H QG+ +SK + + ++ Sbjct: 874 AAAITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKPMKAGEIMK 930 >UniRef50_C0QA93 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA93_DESAH Length = 629 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 91/450 (20%), Positives = 188/450 (41%), Gaps = 27/450 (6%) Query: 81 EMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND--- 137 + ++++ ++L+ I D ++ + Sbjct: 171 RLNQLAFYDSLTGLPNRTLFIENLTTTLDKAHRYKHKAALLYIDLDNFKRINDTLGHSIG 230 Query: 138 -----LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIA 192 R + + T+ V + + + + + A + + + IA Sbjct: 231 DDLLKATSKRLLKCLRTSDTVSRSPAGEMVARLGGDEFTVILPEVTRAEHAGV-VALRIA 289 Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLG 250 + + L + I I + P +I +++ A M K +F + Sbjct: 290 KQLAEPLHLGNHQVIVTPSIGISLFPQDGEDIETLLKNADIAMYFSKRMGPNMFSFYEQS 349 Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 + L + + + L+ A+ + +HYQP L G++ GAEAL RW Sbjct: 350 MNADAL----------KRMTIENHLRQALGRGEFALHYQPQFDLVTGEVCGAEALLRWHN 399 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTS 369 + + P FI +A++ G+ + ++R+ WL Q I++N+ T Sbjct: 400 WELGNVPPIEFISIAEENGMIVAIGEWVMRTACRQTRTWLDQGLPLQRIAVNVSVNQFTH 459 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGY 428 +++ ++ ++P+ + +E+TE + + I+ ++ I +DDFGTGY Sbjct: 460 TDFLNMVKSILEETTLDPQYLEIEITESLLVKNVPETTNILHALKKMNIRIAIDDFGTGY 519 Query: 429 SSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SS+S L+++ +D LKIDK+FVD + +++ II MA+ + L+++AEG+ET+ Q + Sbjct: 520 SSMSRLKEIPIDCLKIDKTFVDGIAIGKRDQSIITAIIAMAEGMNLRLIAEGVETTGQVD 579 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +LR QG+L+SK L + + ++ Sbjct: 580 FLRVKQCQEVQGYLFSKPLSTQQVEVFFQK 609 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 93/451 (20%), Positives = 182/451 (40%), Gaps = 32/451 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A ++ +++ + +L + + D ++ +H Sbjct: 796 AAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHG 855 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN-------AHNVVITSSD 189 + + +++ D + ++ N A +D Sbjct: 856 HDFGDMLLEQVAQR----LLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVAD 911 Query: 190 EIAQGIITRLQKTPGEHIENNGIIYDILPLPE--MNISIITWASTKML-QKGWHRQVFIW 246 +I + + + EH + I + + ++ A M K R F + Sbjct: 912 KILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTFRF 971 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + ++ + + L+ A+ ++ ++YQP V G ++GAEAL Sbjct: 972 FDPAMQA----------LITKRAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAEALV 1020 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW--LRQHPQQHISINLES 364 RW LSP +FI LA++TGL P+ ++R+ + W + +S+N+ + Sbjct: 1021 RWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSA 1080 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 L + ++ NP+ + LELTE + + ++ + G +DD Sbjct: 1081 RQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDD 1140 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSL+YL+ L + LKID+SFV + ++ II + L +++VAEG+E+ Sbjct: 1141 FGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVES 1200 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 +Q+++L +HG QG+L+ + P E R Sbjct: 1201 WEQQQFLEKHGCLEYQGYLFGRPQPAEQLER 1231 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 98/455 (21%), Positives = 178/455 (39%), Gaps = 38/455 (8%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +R ++ + N +L + + D +++ + Sbjct: 441 DKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTLG 500 Query: 137 DLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + V F ++P N I ++ Sbjct: 501 HSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPKIESV----------NDAINTA 550 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIW 246 I + E I I P ++ A + + K R Sbjct: 551 YRILDALKAAFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQL 610 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + + L+ A++ + +HYQP V++ G+IVG EAL Sbjct: 611 YNPTMNA------------KEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALV 658 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESP 365 RW + +SP +FIP+A++TGL L ++R+ + W + ++INL + Sbjct: 659 RWEHPEMGLVSPATFIPIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSAR 718 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDF 424 + +++ +I +NP+Q+ LE+TE + + + I+ + G I +DDF Sbjct: 719 QFYQPNLVEIVAQVIESTGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDF 778 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSL+YL+ L + LKID+SF+ L + + +I + K L LK+VAEG++ Sbjct: 779 GTGYSSLNYLKQLPFNTLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNE 838 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +Q E LR QG+L+S+ L + + + Sbjct: 839 EQLELLRSLNCEIVQGYLFSRPLSVDSTTDILQAN 873 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 103/442 (23%), Positives = 190/442 (42%), Gaps = 19/442 (4%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ ++ + + + ++ I D ++ + Sbjct: 527 KKLTYLAENDSLTHLPNRWFLSNYLREIISRKTSAPDAVSVIFIDLDRFKAVNDTMGHSV 586 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRL 199 + ++ G I S + + + I + +++ + + + + + Sbjct: 587 GDQLLIQAGRRLKDC-IGENSVVARLGGDEFSIVVTHSVYSESLIKSLATHVVEALGKPF 645 Query: 200 QKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLA 257 + + + P + I+ A T M Q K R F + + Sbjct: 646 NLGGQDIFVSASVGIANYPFDGRDTGVILKNADTAMYQAKKSGRNNFKFYNARMNES--- 702 Query: 258 AMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLS 317 L R L+ A+E + +H+QP VSL +G+I G EAL RW + +S Sbjct: 703 -------LTRRLQTETLLRGALERDEFILHFQPKVSLTDGRISGLEALLRWNHPEQGMVS 755 Query: 318 PDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLL 376 P FIP+ + TGL P+ + +IR V E + W H + I+INL L + + + + Sbjct: 756 PADFIPILEDTGLIIPVGVWVIRKVCETLKRWEENHIRLVPIAINLSVRQLQVKGLAETV 815 Query: 377 RDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQ 435 + ++ Y +NP + ELTE DP+++ I+ + G + +DDFGTGYSSL+YL+ Sbjct: 816 KHIVEAYGINPALLEFELTESMLMIDPESAVEILRDIKSYGISLSVDDFGTGYSSLAYLK 875 Query: 436 DLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGV 491 +D LKID++F+ + E +T +I +A L L ++AEG+ET Q E L +G Sbjct: 876 RFPLDALKIDRAFIKDITSNHEDAAITRAVIVLAHELGLNVIAEGVETVDQLELLVTYGC 935 Query: 492 HYGQGWLYSKALPKEDFLRWAE 513 QG+L+SK + ++ + Sbjct: 936 DQMQGYLFSKPVISDECAAMIK 957 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 103/452 (22%), Positives = 185/452 (40%), Gaps = 36/452 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +R +++ + ++ T + D ++ + Sbjct: 433 ESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLDLDRFKTINDTLG 492 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + A+ V F+ V+P DA I + Sbjct: 493 HEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLPDLEHGQDAGTI----------A 542 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIW 246 +I + + P E I + P + S ++ A M K R F + Sbjct: 543 RKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRNGFQF 602 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + L + H+L+ A++ ++ +++QP V+ A+G I G EAL Sbjct: 603 YAADMNTHSLGELL----------LEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALL 652 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESP 365 RW D L+P F+P A+++GL P+ ++R + W+ +++NL Sbjct: 653 RWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQ 712 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 + I L+R+ + +++ + LELTE D + + ++ R G + +DDF Sbjct: 713 QFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDF 772 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSL+YL+ DV+ LKID+SFV + + +I +A L L + AEG+ET+ Sbjct: 773 GTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETA 832 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 Q+ +L +HG QG+L+ + P E F + Sbjct: 833 AQQHFLARHGCDQLQGFLFGQPEPAEAFAQRL 864 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 100/446 (22%), Positives = 188/446 (42%), Gaps = 24/446 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 +M++++ +++ S + D ++ + Sbjct: 200 RKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDA 259 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQGIIT 197 + + + + D + ++ + + V + +I + + Sbjct: 260 GDSLLQTVAQR----LKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKE 315 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGL 255 ++ E I + I + P N ++ A + K R + + L Sbjct: 316 PIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHA 375 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 L + L+ A++ + + +QP V+L GKIV EAL RW Sbjct: 376 L----------KQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGL 425 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQ 374 + PDSFI +A++TGL P+ ++++ M I++NL + K+ Q Sbjct: 426 VMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQ 485 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + + +N + P + LE+TE D + + R R+ G + +DDFG+GYSSLSY Sbjct: 486 SIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSY 545 Query: 434 LQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ L V+ LK+D+ FV + + +T II +A L+LK+VAEG+ET++Q+E+L + Sbjct: 546 LKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLAN 605 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQH 515 + QG+ +SK L ED + +H Sbjct: 606 QCDFAQGYFFSKPLSFEDLYIYLNEH 631 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 91/411 (22%), Positives = 163/411 (39%), Gaps = 25/411 (6%) Query: 113 PPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQI 172 + D ++ + ++ + + DV+ Sbjct: 1000 GHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAAR----LRSSVRDSDVVARLGGDE 1055 Query: 173 DAAII-GNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWA 230 ++ G + +I + + Q + I + P ++ ++ A Sbjct: 1056 FVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNA 1115 Query: 231 STKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQ 289 M K R + + + L A++ + +HYQ Sbjct: 1116 DAAMYHAKSAGRNNVQFFTASMN----------EAASDRRQLEEDLHLALQQKQFVLHYQ 1165 Query: 290 PIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW 349 P V ++ EAL RW + P F+PLA+ TGL P+ ++ + + W Sbjct: 1166 PQVDAQ-RRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAW 1224 Query: 350 L--RQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSA 406 + + +++N+ + +LLR I++ NP ++ LELTE D + Sbjct: 1225 SVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTI 1284 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHII 462 ++ + G +DDFGTGYSSLSYL L +D LKID++FV L + I+ Sbjct: 1285 DKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIV 1344 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 M ++L LK+VAEG+ET Q ++L HG QG+L+S+ L + F + + Sbjct: 1345 TMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 99/441 (22%), Positives = 175/441 (39%), Gaps = 39/441 (8%) Query: 77 AHLMEM-RRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 +L + R + R + N D + D ++V S Sbjct: 281 DNLTRLPNRTLFMERVNHAIKLAKRNQ------------DYLFAVLFLDLDRFKVVNDSL 328 Query: 136 NDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQ 193 + + A + D + + S ++ + ++ ++ I Sbjct: 329 GHDVGDQLLTATARQ----LEKCVRTTDTVAHLSGDEFTILLEDIKDIKDATRVAERIQA 384 Query: 194 GIITRLQKTPGEHIENNGIIYDILPLP-EMNISIITWASTKML-QKGWHRQVFIWLPLGL 251 + E + I + E + I+ A M K + + Sbjct: 385 TLKAPFNLNNHEVFTSASIGIALSSTGYERSEDILRDADIAMYRAKELGKARHEIFDKIM 444 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 L + + L+ A+E ++ V+YQPI SL G + G EAL RW Sbjct: 445 HARALE----------LLRLENDLRRALERQEFEVYYQPITSLVTGMLTGFEALVRWRHP 494 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP---QQHISINLESPVLT 368 + +SP FIP+A+ TGL PL ++ + W Q P +S+NL + Sbjct: 495 ELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIK 554 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTG 427 + + + ++ ++ + LE+TE + +T ++ + R ++ +DDFGTG Sbjct: 555 EPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLRARNIQLSVDDFGTG 614 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSSLSYL V+ LKID+SFV + + II +A +L++ ++AEG+ET +Q Sbjct: 615 YSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQL 674 Query: 484 EWLRQHGVHYGQGWLYSKALP 504 L+ GQG+L+SK L Sbjct: 675 TELKLLNCEQGQGYLFSKPLT 695 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 102/446 (22%), Positives = 176/446 (39%), Gaps = 23/446 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + R+++ + ++ H D + DG++ + Sbjct: 389 EAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMG 448 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQG 194 + + V + D I I+ +A N +D+I Sbjct: 449 HRAGDDLLKEVA----VRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILAS 504 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLV 252 + + + I + P+ + ++ A T M Q K + F + + Sbjct: 505 LHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMT 564 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + L+ A+E VHYQP +LA ++ G EAL RW Sbjct: 565 ----------KREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPR 614 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKI 372 +SP FIPLA++ L + + + ++R W Q +++NL + + + Sbjct: 615 LGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDL 674 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSL 431 P+ +R ++ + LE+TE D + ++ R R G ++ +DDFGTGYSSL Sbjct: 675 PEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSL 734 Query: 432 SYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 SYL+ L V+ LKID+SFV + + + II +A +L LK+VAEGIE Q L Sbjct: 735 SYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILL 794 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAE 513 QG+L +K +P E + Sbjct: 795 SQECDEIQGYLIAKPMPAEQAGIFLN 820 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 84/424 (19%), Positives = 162/424 (38%), Gaps = 28/424 (6%) Query: 96 AYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVM 155 + D + D +++ + + ++ Sbjct: 367 NRYHIEQLLEQEIVTCDENDQSLALMFMDLDRFKILNDTMGHQIGDQLLIQTA------- 419 Query: 156 IDPASFID---VIPYSSWQIDAAIIGN-AHNVVITSSDEIAQGIITRLQKTPGEHIENNG 211 I + + + + + V + +I + + E + Sbjct: 420 IRLQQHVCENCTVGRLGGDEFLILSKDASIEKVSNIAKKILKDMANPFIINSKEFFTSPS 479 Query: 212 IIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQ 269 I + P II A T M K + + +L + Sbjct: 480 IGISVYPKDGQTKDDIIKHADTAMYVAKENGGNNYQFYTPE----------PTNLLSKKY 529 Query: 270 SPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTG 329 + L+ A++N + ++YQP V L +G +VG EAL RW + P FIP+A++TG Sbjct: 530 IIENDLRKALKNEEFLLYYQPQVDLKSGDLVGLEALIRWQHPKLGLIPPMDFIPIAEETG 589 Query: 330 LSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPR 388 + +I+ W + +++N+ + + ++ ++ ++P+ Sbjct: 590 YINHIGKWLIKEACRQNKQWQQNGSFYIPVAVNVSPWQFRDKNFVENIKAALDETNLDPK 649 Query: 389 QIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF 448 + LE+TE + + + +E G ++ +DDFGTGYSSL+ + L +D LKID+SF Sbjct: 650 YLELEITESMMHHFIDTIDKVHQVKEMGIKVAIDDFGTGYSSLNAIDQLPIDTLKIDRSF 709 Query: 449 VDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALP 504 + + + II++ L L +AEG+E +Q +L QG+L+SK LP Sbjct: 710 IRDMITNDSKAAIVKTIIDLGNNLHLNTIAEGVEYEEQATFLANQDCVKAQGYLFSKPLP 769 Query: 505 KEDF 508 E Sbjct: 770 PEQL 773 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 97/450 (21%), Positives = 173/450 (38%), Gaps = 34/450 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 + +++ + ++ D+ I D ++ + Sbjct: 390 EERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHD 449 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + V + F+ V+ + A T +++ Sbjct: 450 VGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTE-----TVAEK 504 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLP 248 I + Q H + I + P + I ++ A M K R + Sbjct: 505 ILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFD 564 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + I + L A+ + +HYQ + ++ GAE L RW Sbjct: 565 PSMEIAVKV----------RAEMEDDLLRALAEKQFLLHYQAQ--MVGERLTGAEVLLRW 612 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW--LRQHPQQHISINLESPV 366 +SP FIPLA++TGL PL ++ + + W + +++N+ + Sbjct: 613 QHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQ 672 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFG 425 + ++ NP+++ LELTE + + ++ + G LDDFG Sbjct: 673 FRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFG 732 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSLSYL+ L +D LKID+SFV + ++ I+ +A +L L ++AEG+ET Sbjct: 733 TGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEA 792 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRW 511 Q ++L G H QG+ +S+ LP EDF + Sbjct: 793 QRDFLASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 92/452 (20%), Positives = 178/452 (39%), Gaps = 38/452 (8%) Query: 75 SEAHLMEM-RRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLT 133 + L + R R +Q ++Y + + D ++ Sbjct: 290 THDDLTGLPNRTLMQDRLLQAISY-------------ADRTASKLAVVFVDLDKFKDIND 336 Query: 134 SHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH--NVVITSSDEI 191 S + ++AM + D D + ++ N H + + + + Sbjct: 337 SMGHFIGDQLLIAMARRLESCIRDS----DTVARPGGDEFVLLLSNIHGMDALSQTLQRV 392 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIWLPL 249 + + I + P + +++ A T M K + F + Sbjct: 393 LALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGKNNFQFYTR 452 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 L L+ +++++A+ + + +HYQP ++L +I G EAL RW Sbjct: 453 ELNSILVE----------RLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRWH 502 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW-LRQHPQQHISINLESPVLT 368 +SP+ FIP+A+++ L E + ++ + +S+N+ Sbjct: 503 NPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQFQ 562 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTG 427 + + ++ + P + LE+TE AD +++ + G ++ +DDFGTG Sbjct: 563 QSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTG 622 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSSL YL+ +D LKID+SFV LE + I+ + L + +VAEG+ET +Q Sbjct: 623 YSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQR 682 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 ++L G QG+L+S+ LP + + Sbjct: 683 DFLLSIGCDEMQGFLFSQPLPFDQAGKLLLAQ 714 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 109/450 (24%), Positives = 187/450 (41%), Gaps = 25/450 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + ++ S+L+H T + D ++ S Sbjct: 644 DSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFG 703 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 + + + + DV+ ++ N + + V ++ I Sbjct: 704 HHFGDELLHQVSARLKQQLRES----DVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHA 759 Query: 195 IITRLQK-TPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIWLPLGL 251 + E + I + P ++ A T M K R + + L Sbjct: 760 LHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEEL 819 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 + + RL AI ++ V YQP +S+ +I+GAEAL RW Sbjct: 820 FLK----------AKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDP 869 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSE 370 + + P FI +A++TGL + + ++ DWL QH P ++++NL L Sbjct: 870 EYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHG 929 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYS 429 + QL+ ++++ + LELTE + + + I+ R+ G I +DDFGTGYS Sbjct: 930 DVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYS 989 Query: 430 SLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL+YL+ +D+LKIDK FV+ + + + I+ M +L+L ++AEG+ET Q E+ Sbjct: 990 SLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEF 1049 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 L Q G Y QG+LYS LP E+F + Q Sbjct: 1050 LEQQGCDYYQGYLYSMPLPAEEFAQLLSQQ 1079 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 97/417 (23%), Positives = 175/417 (41%), Gaps = 26/417 (6%) Query: 107 SLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIP 166 +L + D ++V S L + + A+G + D + Sbjct: 833 ALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQR----LKQYVRSTDTVA 888 Query: 167 YSSWQIDAAIIGNAHNVVITS--SDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI 224 ++ + + + + + + E + + ++ Sbjct: 889 RLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDG 948 Query: 225 S-IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENR 282 + ++ A M K ++ + + L+ + + L+ A+E Sbjct: 949 TILLRNADIAMYKAKAEGCGLY-FYSHEMNEHLI----------KTLEMENSLRQALEKN 997 Query: 283 DICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 + ++YQP V A G+I+G EAL RW + P FIPLA++TGL + ++ Sbjct: 998 EFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEA 1057 Query: 343 FEDMGDWLRQH-PQQHISINLESPVLTS-EKIPQLLRDMINHYQVNPRQIALELTEREFA 400 W + P +++N+ + E + Q ++ + Q+ P Q+ LELTE Sbjct: 1058 CRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVM 1117 Query: 401 -DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK---- 455 D + + + ++ G + LDDFGTGYSSL+YL+ VD LKID+SF+ + Sbjct: 1118 KDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSA 1177 Query: 456 NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + II +A TL L+ VAEG+E + Q + G +Y QG+L+S+ LP EDF+ Sbjct: 1178 AILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALF 1234 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 102/448 (22%), Positives = 185/448 (41%), Gaps = 26/448 (5%) Query: 75 SEAHLMEMRRVSYSYRYI--QEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWL 132 +E H E R + + I +LEH + I D ++V Sbjct: 138 TERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVALLFIDLDNFKVIN 197 Query: 133 TSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDE 190 S + + A+ ++ D + ++ N + + + Sbjct: 198 DSLGHDVGDKLLQAVAARFVSIVRGE----DTVARQGGDEFIVLLSNLESAFDAEAVAQK 253 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLP 248 I + E + I + P +I +++ + M K R + Sbjct: 254 ILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNCEFFK 313 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + R + S L++A++ ++ +HYQPIV++ GK G E L RW Sbjct: 314 PEMN----------RQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRW 363 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVL 367 + P FI LA++TG+ P+ ++R + W Q + ++INL + Sbjct: 364 QHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQF 423 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + + + + +++ V + LE+TE E D + + + + E G EI +DDFGT Sbjct: 424 RQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGT 483 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYS+LS+L+ ++ LKID+SFV + + I+ MA L L+++AEG+E +Q Sbjct: 484 GYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQ 543 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLR 510 +L HG QG+ +SK LP + + Sbjct: 544 LAYLALHGCTRFQGFYFSKPLPAIEIEK 571 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 105/445 (23%), Positives = 198/445 (44%), Gaps = 23/445 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ ++ + + + D ++ + + Sbjct: 546 EAHLQALANFDQLTGLPNRFMLKDKITYLFTLARRNNESLTMMFLDLDHFKNVNDTLGHV 605 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH-NVVITSSDEIAQGIIT 197 R ++ + + + +D++ + N + + + ++ + + Sbjct: 606 IGDRLLIEIAKRLKSAIRE----VDLVSRIGSDEFILLFPNTDADSALNIATKLIETVSL 661 Query: 198 RLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 E I I P ++I A T M Q K + R F + + + Sbjct: 662 PTVFEHHELFITATIGIAIYPNDGEEFETLIKNADTAMSQAKRYSRNTFHFFTEEMQVH- 720 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 L+R + ++ A+ ++ VHYQP +S G I+GAEAL RW + Sbjct: 721 ---------LQRKLKIVNAMRHALLRNEMQVHYQPQISAVKGHIIGAEALLRWRHPELGD 771 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQ 374 +SP FIP+A+ +G + ++R+ + M W + +++NL + + Sbjct: 772 ISPGEFIPIAESSGQIVAIGEWVLRTAIDQMKVWQNEGLAPMVVAVNLSALQFKQANLIG 831 Query: 375 LLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 ++ M+N Q+ + + LELTE DP+ + I+++ G + +DDFGTGYSSLSY Sbjct: 832 MIISMLNKAQLAHQYLELELTEAITMDDPQQAINIMNQLHAKGIRMSIDDFGTGYSSLSY 891 Query: 434 LQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ V LKID+SF+ + + + II+MAK L ++ +AEG+ET++Q E+LR H Sbjct: 892 LKQFKVYKLKIDQSFICNLARDSDDRAMVHAIIDMAKNLGMQTIAEGVETAEQLEFLRLH 951 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQ 514 G + QG+ +SKA+P ++F R+A+Q Sbjct: 952 GCNEIQGYYFSKAIPADEFSRFAKQ 976 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 99/424 (23%), Positives = 180/424 (42%), Gaps = 26/424 (6%) Query: 107 SLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFID--- 163 ++ + I D ++V + + + + M P + Sbjct: 603 AMTDADRYNYKLGLLLIDLDRFKVINDTLGHQAGDELIQKVADVLELTMRSPDTHSRAKQ 662 Query: 164 ---VIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP 218 + ++ + + S++ I + + + I + P Sbjct: 663 EHTTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEPFFIQNQDVFTSASIGISVYP 722 Query: 219 LPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ 276 + + A M K + + + ++L+ Sbjct: 723 DHGRDYDSLTGNADIAMYRAKENGKNQMEMYSSEINTLTME----------RFQMENQLR 772 Query: 277 DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTL 336 A+E + +HYQP L N +++G EAL RW +D +SP FIPLA++TGL P+ Sbjct: 773 KALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAEETGLIIPIGY 832 Query: 337 LIIRSVFEDMGDWLRQHPQQHI-SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELT 395 +++ W+ Q + I S+N+ + L + Q ++ ++ Q+ + + LE+T Sbjct: 833 WVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQLPTQYLCLEIT 892 Query: 396 ER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL-- 452 E + S ++ E G +I +DDFGTGYSSL+ L+ L + +KIDKSF+ + Sbjct: 893 ESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDV 952 Query: 453 --EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + + II MA +L+L + AEG+ET Q+ L Q +Y QG+LYSK LP E+ LR Sbjct: 953 DKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAEECLR 1012 Query: 511 WAEQ 514 + ++ Sbjct: 1013 FVQE 1016 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 97/410 (23%), Positives = 182/410 (44%), Gaps = 37/410 (9%) Query: 122 KISKDGYRVWLTSHNDLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQID 173 I D ++ + R MG V + F+ V+ Sbjct: 839 FIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSD------ 892 Query: 174 AAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWAST 232 H+ V ++ + G+ + I + P ++ +++ A Sbjct: 893 -----TDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADM 947 Query: 233 KML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPI 291 M K R + + + ++ Q L+ AI ++ ++YQP Sbjct: 948 AMYRAKAAGRNNYQFFTAAMNT----------LVTERQQIETGLRQAIACNELLLYYQPQ 997 Query: 292 VSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR 351 V +++G++VG EAL RW + ++PD FIP+A++ + P+ ++ + + +W Sbjct: 998 VDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRD 1057 Query: 352 QHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPII 409 + + +++NL + L + I + +++ +++ + LE+TE P+ +A ++ Sbjct: 1058 KGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLL 1117 Query: 410 SRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMA 465 + R+ G E+ +DDFGTGYSSLSYL+ L +D LK+D+SFV +E ++ I MA Sbjct: 1118 AELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMA 1177 Query: 466 KTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 L L +VAEG+E Q L G QG+ +SK L +D R+ E++ Sbjct: 1178 HELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIERN 1227 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 99/462 (21%), Positives = 182/462 (39%), Gaps = 42/462 (9%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A ++ ++++ Q L + I D ++ + Sbjct: 468 AVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQG 527 Query: 137 DLGIIRYMV--------AMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + ++ V + F+ ++ + V + Sbjct: 528 HDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVV------AQVEAVA 581 Query: 189 DEIAQGIITRLQKTPGE---------HIENNGIIYDILPLPEMNIS-IITWASTKMLQ-K 237 +I + + + I + N+ ++ A M Q K Sbjct: 582 GKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAK 641 Query: 238 GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG 297 R + + + + + L++A+E ++YQP V + Sbjct: 642 DSGRNAIRFFDPEMQAAITS----------RVALEADLREAVEAGQFQLYYQPQVVGESH 691 Query: 298 KIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH--PQ 355 ++ GAEAL RW + + P FIPLA++TGL PL ++ + + W Q Q Sbjct: 692 RLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQ 751 Query: 356 QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYRE 414 +++N+ + + + ++ NP+++ LELTE + + ++ + Sbjct: 752 LTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKS 811 Query: 415 AGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD----ALEYKNVTPHIIEMAKTLKL 470 G LDDFGTGYSSLSYL+ L +D LKID+SFV+ + I+ +A++L L Sbjct: 812 RGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGL 871 Query: 471 KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 ++AEG+ET +Q +L + G H QG+L+SK LP F +W Sbjct: 872 AVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQWI 913 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 105/513 (20%), Positives = 198/513 (38%), Gaps = 38/513 (7%) Query: 17 SVLLPVGLSIWLAHQQVETSFIEELDTYSSRV----AIRANKVATQGKDALQELERWQGA 72 S+ LP+ +S + + L Y++ + D + + Sbjct: 718 SIALPLAIS---------KAEMAVLTIYAAEPDAFNLDEVALLEELASDLAYGIGALRTR 768 Query: 73 ACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWL 132 + + +++ I + + ++ D + + Sbjct: 769 VAHKEAEDRLDFMAHHDALTGMPNRILLHDRFEQVAATARRRGSNVAMLFLNLDDFHLVN 828 Query: 133 TSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS--SDE 190 +V + + D I ++G+ ++ + Sbjct: 829 DVLGRSLADHMLVQVVER----LHGCIRESDTISREGGDEFIILLGDVGDLAAIEIIVQK 884 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKM-LQKGWHRQVFIWLP 248 I + I I P + + +I+ + + K + + + Sbjct: 885 ILDAFSEPFTVDDHIVSVTSSIGISIFPNDGRDFNRLISQSEAALQKAKAAGKDTYNFFT 944 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + I L +L+ AI N++ ++YQP + N +++GAEAL RW Sbjct: 945 EQMNINALEH----------MQLQGQLRHAIINQEFRIYYQPQIDTLNERMIGAEALVRW 994 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH--PQQHISINLESPV 366 + P FIPLA+++GL PL ++ W +++ P +++NL + Sbjct: 995 QHPQHGLVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQVWRKRNRMPSMVMAVNLSAVQ 1054 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFG 425 I + + + + + LELTE D + + R ++ G ++ +DDFG Sbjct: 1055 FKRGNIVETVIQALERSGLPAENLELELTESILLDDVEVVMETLHRLKDIGIKLSIDDFG 1114 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSLSYL+ L VD LKID+SFV + E + II++ TL+L ++AEG+ET Sbjct: 1115 TGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAIIQLGHTLQLTVIAEGVETRA 1174 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 Q + L+ + QG+L+S+ +P EDF EQ Sbjct: 1175 QLQLLKSLECNEVQGYLFSRPIPAEDFSGLFEQ 1207 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 109/426 (25%), Positives = 182/426 (42%), Gaps = 36/426 (8%) Query: 106 SSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGII--------RYMVAMGTAHYVVMID 157 S LE + D +++ + R + +G V + Sbjct: 446 SGLEERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLG 505 Query: 158 PASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDIL 217 F+ V+ A +V + E+ Q + E ++ I + Sbjct: 506 GDEFVIVLDCPQ----------ATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVS 555 Query: 218 PLPE-MNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRL 275 P S++ T M K + F + + + + L Sbjct: 556 PHDGSDPYSLLKNIDTAMYAAKSSGKNNFKFFTEKM----------REQINERMQMENHL 605 Query: 276 QDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLT 335 + AI + +HYQP V L G+I+G EAL RW + + P+ FI +A++ L PL Sbjct: 606 RQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLG 665 Query: 336 LLIIRSVFEDMGDWLRQHPQ-QHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALEL 394 ++ + W RQ + IS+N+ + L S + L+ +++ +Q+ P + LE+ Sbjct: 666 EWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEI 725 Query: 395 TEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE 453 TE DP+ + P + + G + +DDFGTGYSSLSYL+ L + LKID+SFV +E Sbjct: 726 TESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIE 785 Query: 454 ----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 + I +A+TL L +VAEG+ET Q E+LR G QG+ +SK LP + + Sbjct: 786 TDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPANNIM 845 Query: 510 RWAEQH 515 + +H Sbjct: 846 AFVSRH 851 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 107/444 (24%), Positives = 178/444 (40%), Gaps = 36/444 (8%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG----- 139 +++ + ++ H + D ++ S Sbjct: 691 LAFHDPLTGLANRLLFMDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAAL 750 Query: 140 ---IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 R + V F ++ S + + +I + +I + + Sbjct: 751 KEVAQRLTTCLRETDTVSRFGGDEFNVLLSGPSHEEEIELI----------AHKILKSLA 800 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEM-NISIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 E I P I+++ A T + K R F + + Sbjct: 801 WPYDINDHEVFMTCSIGIASYPKDGREAITLVKNADTALYRAKDLGRNNFQFYSSSMNAR 860 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 L + L+ E +++ VHYQP V L +G+I G E L RW G+ Sbjct: 861 ALE----------RMAMESSLRRMFERQELRVHYQPQVGLQSGRITGLEGLVRWEHPVGN 910 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIP 373 ++P F+PLA++TGL P+ ++++ + WL + IN+ + L Sbjct: 911 MIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRLGINVSAHQLQKSDFA 970 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 +L+ ++ + P + LE+TE + + + R R G I +DDFGTG+SSLS Sbjct: 971 ELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVGITISIDDFGTGFSSLS 1030 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+DL D LKID++FV L N+ HIIEMA L LK++AEG+E Q ++LR+ Sbjct: 1031 YLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVIAEGVENQAQLDFLRE 1090 Query: 489 HGVHYGQGWLYSKALPKEDFLRWA 512 G QG+L S+ L ED Sbjct: 1091 AGCDEIQGFLVSRPLAAEDITEIL 1114 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 95/451 (21%), Positives = 170/451 (37%), Gaps = 36/451 (7%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ ++ + ++ H D + D ++ S Sbjct: 258 EKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFSVFFLDVDRFKPINDSLGHST 317 Query: 140 IIRYMVAMGTA--------HYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEI 191 + + M V I F+ V P V + +I Sbjct: 318 GDKVLQQMARRLSGTVGPEDTVARIGGDEFVIVFPEQKD----------PGKVHEIARKI 367 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPL 249 + ++ I + P +++ A + M K + Sbjct: 368 RDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKGSGQIQFYSG 427 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 L + L+ IE + ++YQP V+LA G++ EAL RW Sbjct: 428 ELNDSAAL----------RIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWN 477 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLT 368 + L P FIP A++TGL PL I+ + W + + +++NL + Sbjct: 478 HPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFI 537 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTG 427 ++ + + + D + + P + LE+TE DP+ + +S R+ G + +DDFGTG Sbjct: 538 NQDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTG 597 Query: 428 YSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSS SYL+ +D LKID+SF+ + + II + L LK++AEG+E+ Q Sbjct: 598 YSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQL 657 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 E L+ QG+ S+ LP + ++ Sbjct: 658 EMLKAMECDAYQGFFNSRPLPPGELAERLKE 688 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 103/468 (22%), Positives = 192/468 (41%), Gaps = 32/468 (6%) Query: 50 IRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLE 109 R V + +R + A + R+ R + +A + + + + Sbjct: 511 NRLLVVVRDITERKNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMF 570 Query: 110 HESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSS 169 + G R+ R + + + + F+ V+ Sbjct: 571 LDLDQFKTVNDSLGHAAGDRLLKDV-----AWRLRQCVRESDTIARLGGDEFVIVLNAVR 625 Query: 170 WQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIIT 228 + V+ +++I + + + E + + P + +++ Sbjct: 626 DA----------DGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMK 675 Query: 229 WASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVH 287 A M K R + + + +A + L A+E + ++ Sbjct: 676 KADAAMYHAKESGRSTYRFFAARMNADAVAH----------LALRSGLHRALERGEFQLY 725 Query: 288 YQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMG 347 +QP VSL G +VGAEAL RW + +SP FIP+A+ +GL P+ ++R Sbjct: 726 FQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQAA 785 Query: 348 DWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSA 406 W +++NL + + + +R+ + + P + LELTE D + Sbjct: 786 LWQAGGHALTMAVNLSALQFRRGDLERAVREALEESGLAPHSLELELTESIMIQDHEAVM 845 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHII 462 + R G ++ +DDFGTGYSS++YL+ VD LKID+SFV + + +T II Sbjct: 846 DMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQAII 905 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 +MA +LKL+++AEG+E ++ E+LR HG QG+LY + + + F + Sbjct: 906 QMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPMTAQRFEK 953 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 99/448 (22%), Positives = 178/448 (39%), Gaps = 36/448 (8%) Query: 81 EMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGI 140 + ++ + ++ + D ++ S Sbjct: 261 RIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDLDRFKHINDSFGHSVG 320 Query: 141 I--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIA 192 R ++ V + F+ ++ + Q DA +I + +I Sbjct: 321 DGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLATQADADVI----------ARKIL 370 Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLG 250 I + + + P N +++ A + K R + + Sbjct: 371 DTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYRFYTRE 430 Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 L + + L A+ N ++ ++YQP V L G+I G EAL RW + Sbjct: 431 LGARV----------EEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRR 480 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTS 369 + PD FIP+A+ GL P+ ++R+ W R+ P I++NL + Sbjct: 481 PGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQ 540 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAP-IISRYREAGHEIYLDDFGTGY 428 + + ++R + + P + LELTE + + + G + LDDFGTGY Sbjct: 541 QDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGY 600 Query: 429 SSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLSYL+DL +D++KID+SF+D + +T II MA++L ++ VAEG+ET Q Sbjct: 601 SSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLS 660 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +L +H H QG+ +S + ++ Sbjct: 661 FLNRHRCHAMQGYYFSHPVTGDEIADML 688 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 93/444 (20%), Positives = 180/444 (40%), Gaps = 24/444 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +R ++ + ++++ + D I D ++ S Sbjct: 503 EALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFIDLDRFKNVNDSLGHS 562 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS--SDEIAQGII 196 + ++ D I ++ + + + + +I Sbjct: 563 VGDALLRQAAKRLASLLHGG----DTIARPGGDEFVMLLAEITDRAVAANRAAQIIDAFS 618 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 T + E I I P ++ +++ A M K R + + + + Sbjct: 619 TPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRNTYRFFTDEMSL- 677 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 +R + L+ A+ + V YQP L++ +I+G EAL RW + Sbjct: 678 ---------RVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERG 728 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIP 373 ++P+ FIPLA+ TGL + ++ + W +++N + Sbjct: 729 LIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGNFA 788 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + + +++ + R + +ELTE D A ++ ++ G + +DDFGTGYSSL+ Sbjct: 789 ETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLA 848 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ +D LKID+SF++ L + N+T II +A++L + ++AEG+ET+ QE +L Sbjct: 849 YLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVD 908 Query: 489 HGVHYGQGWLYSKALPKEDFLRWA 512 G GQG+L+S +P E Sbjct: 909 QGCAEGQGYLFSPPVPVESMTALL 932 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 108/450 (24%), Positives = 183/450 (40%), Gaps = 36/450 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 E+ R ++ + + + D +++ Sbjct: 396 EQELERRAHYDELTGLANRVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHD 455 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + A V F+ V+ DAA IG Sbjct: 456 CGDRLLVAIAQRLQTVVREADTVARHGGDEFVIVLSEPDNGEDAAEIGR----------R 505 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLP 248 + Q I + E + + P ++ +++ A M K R + Sbjct: 506 LLQRIAEPVWIDEHELYTTASVGVSLFPRDGTDVDTLLRNADAAMYRAKHLGRNNLQFYS 565 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + + L + +L+ A+E ++C+HYQP SL G+++G EAL RW Sbjct: 566 EEMNLS----------LSKRLRMLSQLRQAVERNELCLHYQPQASLPGGRLLGVEALVRW 615 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVL 367 + +SP FIPLA+++GL EP+ ++R W R IS+NL + Sbjct: 616 QHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQGVAWDRAGFMPLRISVNLSARQF 675 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + K+ +RD++ + P ++ LELTE +P+ S +S R+ G + LDDFGT Sbjct: 676 DNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQSVQRLSAIRDLGVRLALDDFGT 735 Query: 427 GYSSLSYLQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSL+YLQ D++KID+SFV + +I MA+ L + +AEG ET++ Sbjct: 736 GYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTVIAMARLLGSETIAEGAETAET 795 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +L ++G QG+ S+ LP + + Sbjct: 796 ITFLGRNGCDAVQGYYISRPLPAGEIEQLF 825 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 101/448 (22%), Positives = 177/448 (39%), Gaps = 37/448 (8%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWL-TSHNDL 138 R R Q + + + K+ DGY + Sbjct: 682 DLPNRNLIQERIEQAIVRARRG------GRLLALLYLDLDRFKVLNDGYGHLFGDAVLKT 735 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 R + + V + F+ ++ DA + +I + Sbjct: 736 ASERLLKLVREGDTVARLGGDEFLILLADLEQPADAD----------AVARKIVGSLDCP 785 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLL 256 + + + I + P +I A M K R + + + + Sbjct: 786 IVVQERKIHLSGSIGVSLFPRDGETADELIDNADMAMYRAKELGRNTYQFFTRAMSLET- 844 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 +R +L+ A + + YQP VSL NG I G EAL RW + + Sbjct: 845 ---------QRRVDLEIKLRGAATAGQLQLVYQPKVSLENGGISGCEALLRWHHPELGIV 895 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQL 375 SP+ FIP+A+ +GL P+ ++R+ W+ P +++N+ + + + Sbjct: 896 SPEHFIPIAEDSGLIVPIGDWVLRTACMQARAWMDAGLPPVCVAVNVSTRQFLQQDVVAW 955 Query: 376 LRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + + + ++ LELTE A D + I + ++ G ++ +DDFGTGYSSL+YL Sbjct: 956 VTRTLRETGLPAARLELELTESLIARDIEKVTATIDQLKDIGVKLSIDDFGTGYSSLNYL 1015 Query: 435 QDLDVDILKIDKSFVDA----LEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + VD LKID+SFV +E + + +I +A LK K++AEG+ET + +L +G Sbjct: 1016 KRFRVDTLKIDQSFVRNMLTEMEDETIVLAVIALAHNLKFKVIAEGVETEQHSRFLCSNG 1075 Query: 491 VHYGQGWLYSKALPKEDFLRWAE--QHL 516 QG +S+ + E F +HL Sbjct: 1076 CDEIQGHYFSEPVTAEAFETMLRAGKHL 1103 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 101/407 (24%), Positives = 172/407 (42%), Gaps = 28/407 (6%) Query: 125 KDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVV 184 +D + VW+ + +G ++ + A + G+ VV Sbjct: 304 QDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAACVRESDTLARLGGDEFVVV 363 Query: 185 IT----------SSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTK 233 + + +I I + E I P E +++ A Sbjct: 364 LDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYPMDGEDGHTLLKHADLA 423 Query: 234 ML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 M K R F + + I ++ + ++ A+E + + YQP V Sbjct: 424 MYKAKELDRNNFHFFSHDMNIKVME----------RMMLENSMRKALERDEFFLVYQPQV 473 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 +G+I G EAL RW D L+PD FI LA++TG PL ++ + W + Sbjct: 474 DARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTACRQNRAWQKL 533 Query: 353 H-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIIS 410 P +++NL ++ +++ ++ + P + LE+TE + + I+ Sbjct: 534 GFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRNADQNIAILR 593 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAK 466 +E G + +DDFGTGYSSLSYL+ + LKIDK+FV + + + II MA+ Sbjct: 594 SLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNPDDAAIAEIIIAMAQ 653 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 TLKL ++AEG+ET Q E+L H QG+L+S+ L + F+ Sbjct: 654 TLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKFVYLLR 700 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 100/454 (22%), Positives = 179/454 (39%), Gaps = 35/454 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A + + ++ I D ++ + Sbjct: 896 AQQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLG 955 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + + V + F+ ++P +I + Sbjct: 956 HEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLIILPNLRETHHCKLI----------A 1005 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIW 246 +I + E + I + P ++S ++ A M K R F + Sbjct: 1006 SKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMRNADAAMYLGKRGGRNDFKF 1065 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 +G+ + L+ A++ + + YQPI+ L ++GAEAL Sbjct: 1066 YTMGMN----------EEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALL 1115 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPV 366 RW + +SPD FI +A++TGL L +I +++ +W Q +++NL Sbjct: 1116 RWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSPIWVAVNLSPRQ 1175 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFG 425 K+ +++ + I + + LE+TE+ D S II + E + +DDFG Sbjct: 1176 FRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFG 1235 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYS+LSYL + LKID+SF+ + + + II M LKL+++AEG+ET++ Sbjct: 1236 TGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKLQVIAEGVETTE 1295 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 Q L G Y QG+ +S+ L E+F R+ + H Sbjct: 1296 QANILEAEGCDYAQGYFFSRPLLSEEFRRYLQSH 1329 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 104/474 (21%), Positives = 195/474 (41%), Gaps = 33/474 (6%) Query: 52 ANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHE 111 ++ + + + +A +++++++ + S+ + Sbjct: 447 TAVISDHEDEIINYVITLIDITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNS 506 Query: 112 SPPDTFPEPGKISKDGYRVWLTSHND--------LGIIRYMVAMGTAHYVVMIDPASFID 163 + + D ++ + L R + + V I F+ Sbjct: 507 QRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVI 566 Query: 164 VIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN 223 ++ +D I + ++ +I + EH I + Sbjct: 567 ILEQLDSDLD---IASKRADLL--CRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKG 621 Query: 224 IS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIEN 281 I ++ A M Q KG R + + +L + + ++ A+ Sbjct: 622 IDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHA----------AMANDIRHALTR 671 Query: 282 RDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRS 341 + ++YQP V +G++ GAEAL RW +SP FIP+A++TGL PL ++ Sbjct: 672 NEFTLYYQPQV-THDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQ 730 Query: 342 VFEDMGDWLRQHP--QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREF 399 + + W ++IN+ + Q + + + Y+ NP ++ LELTE Sbjct: 731 ACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTESML 790 Query: 400 -ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EY 454 D + + +S+ ++ G LDDFGTGYSSL+YL+ L +D LKIDKSFV L Sbjct: 791 HEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHD 850 Query: 455 KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF 508 ++ I+ +AK++ L ++AEG+ET +Q L +G QG+L+S+ +P E F Sbjct: 851 ADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 110/523 (21%), Positives = 207/523 (39%), Gaps = 51/523 (9%) Query: 5 HLVGLISGVLILSVLLPVGLSIWLAH--QQVETSFIEELDTYSSRVAIRANKVATQGKDA 62 +++G+++L++L+ +GL+++L + + + + + V R Q ++ Sbjct: 272 WHPVILAGIVLLTLLV-IGLALFLRQQIRHHTRALRAQSEALAQEVRER-----EQAQER 325 Query: 63 LQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGK 122 L EL S++ R + R Q + Y + Sbjct: 326 LNELAY------SDSLTHLPNRTLFQDRLHQAMEYAK-------------RHERLIALLF 366 Query: 123 ISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH- 181 I D ++ S R + + V+ + D + I+ + Sbjct: 367 IDLDDFKRVNDSLGHAAGDRLLQEIARRFGRVLRE----TDTLARLGGDEFTVILTDIQR 422 Query: 182 -NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ-KG 238 +T ++ + + I + P + ++ A T M Q K Sbjct: 423 PEDAVTFVRKLLDTLRAPFMLGEQSITMSASIGITLYPSDDTAEADLLKDADTAMYQAKS 482 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 + F + L + R + L+ A++ +HYQPIVSL Sbjct: 483 RGKNTFDFYAPELTQSV----------RARLTMEGDLRAALDTNQFLLHYQPIVSLNGAG 532 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQH 357 + G EAL RW + PD FIP+A+ +GL + +I + + W + Sbjct: 533 VQGLEALVRWQHPVRGLVPPDEFIPVAEDSGLIHEIGDWVIDAACAQLAQWDARGLSHLT 592 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAG 416 ++INL + + + + + + ++ LE+TE + + A + G Sbjct: 593 LAINLSPVQFRRDGLVSRIARRLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMG 652 Query: 417 HEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKM 472 + +DDFGTGYS+L+YL+ + LK+D+SFV+ + + + + I+ MA L+L++ Sbjct: 653 IGLCIDDFGTGYSALNYLRHFPIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEV 712 Query: 473 VAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 VAEG+E Q E LR+ G QG+L S+ LP + W E Sbjct: 713 VAEGVEEKSQLELLREMGCDQVQGYLLSRPLPAAEIPGWIESQ 755 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 118/496 (23%), Positives = 199/496 (40%), Gaps = 32/496 (6%) Query: 36 SFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEV 95 L + S R+ KV +DA + + + M + + Sbjct: 909 QTERRLISKSGRIVNAILKVV-LVRDAQGQPLHYISQVVDISDRKRMEEQLLHDAFHDVL 967 Query: 96 AYIDNNVPQCSSLEHESPP-----DTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTA 150 + N LE+ D + D ++V S L R + A+ Sbjct: 968 TGLPNRALFMDRLEYALRRAGQRWDYLCAVIVLDLDRFKVINDSLGHLVGDRLLSAIAER 1027 Query: 151 HYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN--VVITSSDEIAQGIITRLQKTPGEHIE 208 + D + ++ + N + I Q + + E Sbjct: 1028 ----LQGCLRPSDTLARLGGDEFTILLDDIPNTAAATDIAKSIHQTLESSFNLDGYEVFA 1083 Query: 209 NNGIIYDILPLP-EMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILR 266 I + + ++ A T M K ++ + LA Sbjct: 1084 TASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTACYVMFDTAMSGRALA--------- 1134 Query: 267 RIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQ 326 L+ AIE +++ V+YQPI+SL GKI G EAL RW + +SP +FIPLA+ Sbjct: 1135 -QLRLETELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPGAFIPLAE 1193 Query: 327 QTGLSEPLTLLIIRSVFEDMGDWLRQH---PQQHISINLESPVLTSEKIPQLLRDMINHY 383 +TGL P+ ++R+ + W +Q P +S+NL + + + + +I Sbjct: 1194 ETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQET 1253 Query: 384 QVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDIL 442 +VNP + LE+TE + +++ ++ R + ++Y+DDFGTGYSSLS L +D L Sbjct: 1254 EVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDAL 1313 Query: 443 KIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL 498 KID+SFV + + I+ +A L + +VAEGIET+ Q LR YGQG+ Sbjct: 1314 KIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYF 1373 Query: 499 YSKALPKEDFLRWAEQ 514 +SK L ++ + Sbjct: 1374 FSKPLNRQAAEQLMMN 1389 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 104/452 (23%), Positives = 188/452 (41%), Gaps = 36/452 (7%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 + +++ + + + +L S + I D ++ + S Sbjct: 174 ANLFYLAHFDQLTKLPNRVLFMDRLAMTLAEASRTNAQVGLLFIDLDKFKHFNDSMGHAF 233 Query: 140 IIRYMVAM--------GTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEI 191 + ++A+ V + F ++ S Q D I+ I Sbjct: 234 GDQLLIALAGILARCSREMDTVARLSGDEFTIIVDSISGQKDLDIL----------CWRI 283 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKML-QKGWHRQVFIWLPL 249 + Q E + I I P E +++ A M K R + Sbjct: 284 LDALKLPQQIMGREIFISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRNTYRHYAA 343 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 G+ + L S L+ AIE + ++YQP ++L +G++VG EAL RW Sbjct: 344 GMQLYSLD----------RMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWH 393 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLT 368 L+P FI +A++TGL + +I WL++ IS+N+ + Sbjct: 394 HPQRGLLTPIHFIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFY 453 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTG 427 ++ ++ ++NP + ELTE F D + + G ++ +DDFGTG Sbjct: 454 QSDFCDMVEHILKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTG 513 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YS+LSYL+ +D LK+D+SF+ +E + + I+ +A+++ L++VAEG+ET + Sbjct: 514 YSNLSYLRKFPIDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVEL 573 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 W G + QG+ +S+ LP E F RW ++ Sbjct: 574 HWAESSGCTFVQGYRFSQPLPAEKFTRWVREY 605 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 92/447 (20%), Positives = 181/447 (40%), Gaps = 21/447 (4%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ R++ ++ + D ++ S Sbjct: 268 EQQLTRLAQYDCLTGLPNRALFTSLLSQAISRSDRRKNKLALLFLDLDRFKQVNDSLGHD 327 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 + + + ++ + + + + + + + + + ++ + Sbjct: 328 VGDLLLQQVAQRLQLATLEGGT-VSRLGGDEFMVILEEVNSESHKAAKLAQKMITSLDAP 386 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLL 256 E + + I + I ++ A M K R F + L Sbjct: 387 FNILGREVLISTSIGIALCSGSTQCIDSLLKRADMAMYRAKEQGRNNFQFYTAELQ---- 442 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 + + +RL+ A++ ++ +HYQP V +G+I+G EAL RW + + Sbjct: 443 ------QQASKSIELENRLRHALQRKEFFLHYQPQVDTNSGQIIGLEALLRWQPDGQALI 496 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH---PQQHISINLESPVLTSEKIP 373 SP+ FIP+A++ GL P+ ++R + W R P +++NL L + Sbjct: 497 SPEEFIPVAEEAGLIVPIGEWVLREACSQLHRWHRSGLLSPTVKMAVNLSVRQLEHTSLL 556 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 L ++ + P Q+ LE+TE DP I+ G ++ LDDFGTGYSSL Sbjct: 557 STLTQILQETGLKPSQLELEITETAVMKDPDLVVNILHSIHAMGIQLSLDDFGTGYSSLR 616 Query: 433 YLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ L + +LKID+SF++ + + + II +++ L L +VAEG+ET +Q ++L + Sbjct: 617 YLKLLPLHVLKIDRSFINDIGGKQRDQAILESIIYLSRNLDLTVVAEGVETQEQLDFLSR 676 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 H QG+ SK + + ++ Sbjct: 677 FNCHSIQGYYISKPKSAANIEKLLHKN 703 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 103/416 (24%), Positives = 177/416 (42%), Gaps = 26/416 (6%) Query: 111 ESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSW 170 + P+ I D ++V S L + + + + D + Sbjct: 1007 QQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADK----LQRCVRPTDTVARFGG 1062 Query: 171 QIDAAIIGNAH--NVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISII 227 ++ + + I + + E+ + I PE ++ Sbjct: 1063 DEFVILLEDLTIWTDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELV 1122 Query: 228 TWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICV 286 A M + K R + + ++ L+ A+E + V Sbjct: 1123 RNADIAMYRSKEAGRARYTMFDPIMHTQ----------ATQLLELETNLRLALEREEFIV 1172 Query: 287 HYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDM 346 +YQPIVSL N ++G EAL RW + +SP +FIP+A++TGL PL ++R M Sbjct: 1173 YYQPIVSLMNRNLLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQM 1232 Query: 347 GDWLRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP- 402 W Q +S+NL L + + +++ + + + LE+TE + Sbjct: 1233 KAWQEQFIGAENLRVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNK 1292 Query: 403 KTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVT 458 + + ++ + + ++ +DDFGTGYSSLSYL L VD LKID+SFV + E + Sbjct: 1293 EQVSELLLQMKAKKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIV 1352 Query: 459 PHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 II +A L++ +VAEG+ET + L+Q G +GQG+ +SK L E + W E+ Sbjct: 1353 EAIITLAHHLQMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPLESEKIVSWLER 1408 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 108/447 (24%), Positives = 176/447 (39%), Gaps = 36/447 (8%) Query: 82 MRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGII 141 M R + +L H + DG++ S Sbjct: 597 MWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGD 656 Query: 142 --------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQ 193 R + V + F V+ + + D I + ++ Sbjct: 657 ELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDLADRADLGAIAD----------KLVA 706 Query: 194 GIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGL 251 + H + + + P ++ +++ A M K + + Sbjct: 707 VLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAGKNRAQPYAPHM 766 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 LA L+ A+E R +HYQPIV A+G +VGAEAL RW Sbjct: 767 QADALA----------RVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHP 816 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSE 370 + +SP FIP+A++ GL P+ ++R V DWL + P +++N+ Sbjct: 817 ERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREA 876 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYS 429 +P+L+R ++ + + E+TE + + +E G LDDFGTG+S Sbjct: 877 GLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFS 936 Query: 430 SLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SLSYL+ VDI+KID+SFV + II MA +L L++ AEG+E+++Q E+ Sbjct: 937 SLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREF 996 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWA 512 LR G Y QG+L K L + F Sbjct: 997 LRALGCDYLQGYLIGKPLAADAFEALM 1023 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 110/513 (21%), Positives = 205/513 (39%), Gaps = 49/513 (9%) Query: 16 LSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACS 75 + +L G + + + S + D ER A Sbjct: 530 CADVLISGAGGPYGILGAYSPEPQRFTSSSINFLQSLANILATAIDRKTTEERLTYLAQF 589 Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 + R + R Q + + N + + + D +++ + Sbjct: 590 DPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADL-------------DRFKIVNDTM 636 Query: 136 NDLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS 187 R + + V + F ++ DA +I Sbjct: 637 GHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLI---------- 686 Query: 188 SDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFI 245 ++++ + + E + + I P + ++ A T M Q K ++ Sbjct: 687 AEKVISALQVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPAIYQ 746 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 + + +A +L+ A+ R+ +HYQP SL NG+I G EAL Sbjct: 747 FYLPQMNERAVA----------RLKIETQLRGALARREFVLHYQPKASLINGEITGFEAL 796 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLES 364 RW + P FI + + TGL + ++++V E + +W Q H I+INL + Sbjct: 797 LRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSA 856 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 + + ++ + + ++PR + ELTE + + +A + + G +I +DD Sbjct: 857 RQFQQQDLDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDD 916 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSL+YL+ +D+LKID++F+ + + +T +I++A +L LK+VAEG+ET Sbjct: 917 FGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVET 976 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 Q E+L +HG QG+ +S+ LP E + Sbjct: 977 RAQLEFLIRHGCDEMQGYYFSQPLPLEGASKVL 1009 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 106/479 (22%), Positives = 190/479 (39%), Gaps = 37/479 (7%) Query: 55 VATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPP 114 V Q + + + + ++ ++ R++ S + Sbjct: 110 VKDQKGNMTNYVAMFSDITEHKRNVEQLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKH 169 Query: 115 DTFPEPGKISKDGYRVWLTSHNDLG--------IIRYMVAMGTAHYVVMIDPASFIDVIP 166 + + D ++ + R + + F+ ++P Sbjct: 170 NQSFALLFLDLDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQDTIARFGGDEFVIILP 229 Query: 167 YSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-IS 225 +AA + +++I + + E + I + P + + Sbjct: 230 NLKHIREAAYM----------AEKIVESLKRPFCFNHQEIYISTSIGISVYPYDGTDKET 279 Query: 226 IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDI 284 +I A M Q K R + G+ +++ L+ A+E + Sbjct: 280 LIRMADRAMYQAKKNGRNQYALYHAGMHGNG----------KQLFQLETALRKALERGEF 329 Query: 285 CVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFE 344 ++YQP + + +I EAL RW + ++SP FIPLA+++GL P++ I+ E Sbjct: 330 ELYYQPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACE 389 Query: 345 DMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPK 403 + + P +SIN+ + L+ I VNPR I LELTE + Sbjct: 390 HLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAE 449 Query: 404 TSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTP 459 S +++ + G I +DDFGTG+SSLSYL +DILKID+SF L + Sbjct: 450 QSVERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVK 509 Query: 460 HIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE--QHL 516 II MA +L++++VAEG+ET KQ + L + + QG+ SK L + + + HL Sbjct: 510 AIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSISELYEFLDMWNHL 568 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 105/514 (20%), Positives = 197/514 (38%), Gaps = 43/514 (8%) Query: 27 WLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS 86 ++ + + +L Y+ + + R +EAHL + + Sbjct: 145 YVVVRSSLSELYMQLLGYAVLTVSVGIGAMGLAYLVIARMRRAVLQ--AEAHLDYL---A 199 Query: 87 YSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVA 146 + + N SL + + D ++V + R + Sbjct: 200 HIDSVTELPNRHAFNERLQVSL-KRAGQTGAVGLLLLDLDNFKVVNDTLGHNNGDRLLRQ 258 Query: 147 MGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS----------SDEIAQGII 196 + V I+ A+ V+ A I + I + I + Sbjct: 259 VARRLNDV-IEQANLRAVLCRIGGDEFAVIAELSGRAQIAETEAATLADGLAKRILAALG 317 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNISII-TWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 + + + P ++ ++ A T M K + + Sbjct: 318 APFSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYHAKNHGKNAAASFTSEM--- 374 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG----------KIVGAEA 304 + RR L+ A++ ++ + YQP V L+ + G EA Sbjct: 375 -------DQQARRRLRVEADLRRALDREELLLAYQPQVRLSTDDAHDAVISRANVYGVEA 427 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLE 363 L RW + + P FI +A++TGL PL L ++R+ + W+R+ +++NL Sbjct: 428 LVRWRHPEIGLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDGVTLRVAVNLS 487 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLD 422 + + + + D++ + P Q+ LE+TE D + + ++ AG + +D Sbjct: 488 ARQTRDPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLHAAGISLSID 547 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK--NVTPHIIEMAKTLKLKMVAEGIETS 480 DFGTGYSSL+YLQ + LKID+SFV + + +I MA +L++++VAEG+E Sbjct: 548 DFGTGYSSLAYLQRFPIQKLKIDRSFVQRMPGDGEAIAGAVIAMAHSLRMQVVAEGVEDP 607 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 +Q LR G GQG+L+S+ + + W + Sbjct: 608 EQLALLRDAGCDLGQGYLFSRPQQADALMAWLNR 641 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 105/454 (23%), Positives = 185/454 (40%), Gaps = 36/454 (7%) Query: 75 SEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS 134 S+A +++ R++Y Q + + + I D ++ + Sbjct: 301 SKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDT 360 Query: 135 HNDLG--------IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVIT 186 R + A V + F ++ S V Sbjct: 361 LGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNE----------SVAR 410 Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVF 244 + ++ + + + + I + P ++ ++ A M K R + Sbjct: 411 VARKVLEELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESGRGNY 470 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + + + + S +L A+ + V+YQP +++ +G +VG EA Sbjct: 471 KFFSEEMNVST----------SQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEA 520 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW-LRQHPQQHISINLE 363 L RWPQ DGS + P FIP+A++TGL PL L++R D W +++NL Sbjct: 521 LVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLS 580 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLD 422 + S + + + ++ R +E+TE D + + + + G I +D Sbjct: 581 AREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMD 640 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIE 478 DFGTGYSSLSYL+ + LK+D+SFV + + I+ +AK L LK+VAEG+E Sbjct: 641 DFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVE 700 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 T +Q +LRQ+ QG+ +SK L DF + Sbjct: 701 TQEQLSFLRQNLCDECQGYSFSKPLSAVDFTAFL 734 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 483 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 105/457 (22%), Positives = 191/457 (41%), Gaps = 33/457 (7%) Query: 75 SEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTS 134 S+A ++ ++Y Q L + + + D ++ + Sbjct: 336 SKAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDT 395 Query: 135 HNDLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVIT 186 R + V + F+ ++ S Q A N Sbjct: 396 LGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAI-----EAANKAKK 450 Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVF 244 + +I + Q + I I E I ++ A M Q K R + Sbjct: 451 VAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTW 510 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + + ++A L+ AIE+ +HYQ VS ++G+ +GAEA Sbjct: 511 HFFNKTMQESIIA----------RADMERDLRKAIEDNQFQLHYQAQVS-SSGQTLGAEA 559 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINL 362 L RW + +SP +FIPLA++TGL P+ ++ S + W + +++N+ Sbjct: 560 LIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNI 619 Query: 363 ESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYL 421 + L E + ++ + + +NP ++ LELTE + ++ + G L Sbjct: 620 SAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSL 679 Query: 422 DDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGI 477 DDFGTGYSSL YL+ L ++ +KID+SFV L + + II M+ +L + ++AEG+ Sbjct: 680 DDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGV 739 Query: 478 ETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ET ++ ++L +G + QG+L+SK +P +F ++ Sbjct: 740 ETVEERQYLLDNGCTHYQGYLFSKPVPINEFEVLLKK 776 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 97/450 (21%), Positives = 173/450 (38%), Gaps = 35/450 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 ++ +++ + +L+ I D ++ S Sbjct: 798 EQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDSLGHH 857 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + + V + F+ ++ ++H + Sbjct: 858 VGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIE---------DSHQIEEIMKHR 908 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKML-QKGWHRQVFIWLP 248 + + E + I I P ++ +++ A T M K R + + Sbjct: 909 LLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYT 968 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 L + + S L+ IE ++ +HYQP + L GK G EAL RW Sbjct: 969 EELNSRAM----------QRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRW 1018 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVL 367 D +SP FIP+A++TGL P+ +IR+ + W +S+N+ + Sbjct: 1019 QHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQF 1078 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + + L ++ V+P +I LELTE D + ++ ++ G +DDFGT Sbjct: 1079 RDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGT 1138 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSL+YL +D LKID+SF+ + + II + TL ++++AEG+E + Sbjct: 1139 GYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDE 1198 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 LR G QG+ ++ L E W Sbjct: 1199 YRALRAAGCDGIQGYFVARPLTPEQVPEWL 1228 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 108/505 (21%), Positives = 191/505 (37%), Gaps = 43/505 (8%) Query: 27 WLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS 86 + + + ++ S + RA + K +R + + ++ Sbjct: 227 FETVRWGKGRKPIDVSVTISAMKDRAGNIIGASKIVRDITQR-------KESQERIEYLA 279 Query: 87 YSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND--------L 138 + + ++E+ + D +++ S Sbjct: 280 HYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKA 339 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 R + A V + F+ ++ DAA S++++ I Sbjct: 340 VAQRMQSTVRQADTVSRVGGDEFVVLLSRIETATDAA----------RSAEKLITSISQP 389 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLL 256 Q E + I I P + S + A M KG R + + L Sbjct: 390 YQIEEHELLLTASIGISIYPDNGKDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYA-- 447 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 H L+ A+ +I YQP + LA G+++G EAL RW + + Sbjct: 448 --------AAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLI 499 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR-QHPQQHISINLESPVLTSEKIPQL 375 SP SFIP+A+ +GL L I+R W Q Q I++N+ + + Sbjct: 500 SPASFIPVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDV 559 Query: 376 LRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYL 434 + +++ P + LE+TE ++ + G ++ +DDFGTGYSSLSYL Sbjct: 560 VLRVLSETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYL 619 Query: 435 QDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 + +D LKID+SFV L + I+ M ++L L+++AEG+ET Q +L+ Sbjct: 620 RQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIE 679 Query: 491 VHYGQGWLYSKALPKEDFLRWAEQH 515 QG+LY++ + DF W + Sbjct: 680 CTESQGYLYARPMKSNDFEAWLKTR 704 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 97/446 (21%), Positives = 167/446 (37%), Gaps = 33/446 (7%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND------- 137 +++ + +L + I D +++ + Sbjct: 556 LAFYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLL 615 Query: 138 -LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 +R + V + F+ ++ Q A ++++ + Sbjct: 616 QKVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQ-----PEAATRKAQIVAEKVLATLR 670 Query: 197 TRLQKTPGEHIENNGIIYDIL-PLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 +H + I ++ A M Q K R + + Sbjct: 671 EPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQAS 730 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + A + L+ + VHYQP V +I G EAL RW Sbjct: 731 VSANA----------ALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRG 779 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR--QHPQQHISINLESPVLTSEKI 372 +SP FIP+A++TGL PL ++ + W + + I++N+ Sbjct: 780 MVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDF 839 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 ++ I H + P + LELTE AD + + + + G + LDDFG GYSSL Sbjct: 840 VDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSL 899 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 SYL+ L +D LKIDKSF+ + + II +A++L L ++AEG+ET Q +L Sbjct: 900 SYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLA 959 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAE 513 G Y QG+L+ LP +F + + Sbjct: 960 GLGCGYYQGFLFCPPLPIAEFEAFMQ 985 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 99/444 (22%), Positives = 177/444 (39%), Gaps = 25/444 (5%) Query: 80 MEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLG 139 ++ +++ +L+ D + D ++V S Sbjct: 214 AQLEHIAHYDLLTGLPNRTLLQNRISHALDVARRRDRQVAILFLDLDRFKVVNDSLGHAY 273 Query: 140 IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGIIT 197 + + D + ++ + + ++ I + Sbjct: 274 GDELLRQVSDRLRR----RLREEDTLARWGGDEFIVLVDEVDDPQGLSLLAEGILAELAE 329 Query: 198 RLQK-TPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 + E I + P + +I A T M Q K R + + L + Sbjct: 330 PYRLSNGQEVFVGGSIGISLYPQDGRSAEQLIMKADTAMYQAKDQGRSNYQFYTSALTLA 389 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + L+ A+E + +HYQP V + ++G EAL RW D Sbjct: 390 ----------ANDRLALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEALVRWHHPDKG 439 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVLTSEKIP 373 +PD+FIP+A++TGL PL L ++R+ W+R H+++NL L + Sbjct: 440 LTAPDAFIPMAEETGLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLSMRQLRQPDLV 499 Query: 374 QLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + ++ + + LELTE + ++ + G + +DDFGTGYSSL+ Sbjct: 500 SQIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLA 559 Query: 433 YLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ L +D LKID+SFV + + + II MA+TL L++VAEG+ET +Q +L++ Sbjct: 560 YLKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKK 619 Query: 489 HGVHYGQGWLYSKALPKEDFLRWA 512 G QG+ +S + + W Sbjct: 620 EGCDSYQGFGFSPPVDAQAMTLWL 643 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 98/453 (21%), Positives = 177/453 (39%), Gaps = 37/453 (8%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + ++ ++Y + + + + I D ++ S Sbjct: 488 ENEAQLTHLAYFDPLTHLPNRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFG 547 Query: 137 DLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R +G + I F+ +I DA + N Sbjct: 548 HSIGDEMLVELAKRLRSQVGDQDVLSRIGGDEFVALISGIDNNEDATVAIN--------- 598 Query: 189 DEIAQGIITRLQKTPGEHIE-NNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFI 245 ++ Q + G+H+ + + P + +++ A M K R + Sbjct: 599 -QLRQVFEQPFIVSTGDHLRLTASMGVSLYPNDGTDADTLLRNADAAMYRAKNDGRNNYA 657 Query: 246 WLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEAL 305 + L L AIE + + YQP + L + K VG EAL Sbjct: 658 FYTESLTQQSFEH----------LKLQSALYGAIEQNALYLMYQPKLDLVSRKTVGFEAL 707 Query: 306 ARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLES 364 RW +SP FIP+A++ GL + L ++ + WLR+ I++N+ Sbjct: 708 LRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNVAG 767 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 L ++ ++ + + + LE+TE +P + + R + G E+ +DD Sbjct: 768 QQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSVDD 827 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSL+YL+ L + LKID+SFV + + +I + LKL ++AEG+ET Sbjct: 828 FGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGVET 887 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +Q ++L+Q+ QG+L+S+ ED + Sbjct: 888 KEQADFLQQNQCDQAQGYLFSRPQLPEDLDAFL 920 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 188/441 (42%), Gaps = 25/441 (5%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYM 144 +++ + ++L + D ++ + + Sbjct: 408 LAHHDSLTGLPNRVLFQERLRTALAQAKRLGHKVALMFLDLDKFKDINDTLGHHLGDLLL 467 Query: 145 VAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN--VVITSSDEIAQGIITRLQKT 202 A+ ++ D + A ++ N + ++ I I Sbjct: 468 KAVAKR----LLRCVRETDTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLD 523 Query: 203 PGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMF 260 E + I I P ++ ++ A M + K R + + + Sbjct: 524 EHEVNTSTSIGITIFPDDAVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEMDA------- 576 Query: 261 VLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 ++ + H L+ A+ + +HYQP++ + G++VG EAL RW W+SP Sbjct: 577 ---EIQARKVVEHDLRVALGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVE 633 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT-SEKIPQLLRD 378 FIP+A++T L PL I+ DW R P Q I++NL + ++ D Sbjct: 634 FIPIAERTDLIVPLGRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIAD 693 Query: 379 MINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDL 437 +++ P Q+ LE+TE + + + ++ + R+ G I +DDFGTGYSSL+YL+ Sbjct: 694 ILDQTGFPPDQLQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRF 753 Query: 438 DVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHY 493 VD LKID+SFV + + V I+ + +L ++ EG+ET +Q ++L+ HGV Sbjct: 754 PVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDE 813 Query: 494 GQGWLYSKALPKEDFLRWAEQ 514 QG+ ++KALP ++F R+ + Sbjct: 814 AQGFYFAKALPPDEFARFVRE 834 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 108/455 (23%), Positives = 193/455 (42%), Gaps = 31/455 (6%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFP-EPGKISKDGYRVWLTSHND 137 E+ R ++ + LE F + D ++V S Sbjct: 273 EAELHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFHYAVFFLDLDRFKVVNDSLGH 332 Query: 138 LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGI 195 L ++ A+ + + D++ A ++ + ++V ++ + + + Sbjct: 333 LLGDEFLKAIARRLSSCLREE----DMVARLGGDEFAILLEELSNPDIVHRIAERLQRVL 388 Query: 196 ITRLQKTPGEHIENNGIIYDILPLP-EMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVI 253 E I + E +I+ A M Q K + I + Sbjct: 389 SAPFTLKQHELFTTASIGIALGTSYYEQPEAILRDADIAMYQAKTQGKARHIIFDQAMHT 448 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 + + L+ AIE R+ C+ YQPIVS+ +++G EAL RW Sbjct: 449 RAV----------KRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALVRWHHPQR 498 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-------PQQHISINLESPV 366 W+SP FI +A++TGL PL ++ + W Q P +S+NL S Sbjct: 499 GWISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVNLSSKQ 558 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFG 425 + ++ ++ + + LELTE + T+ ++ + +E G ++ LDDFG Sbjct: 559 FCQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLALDDFG 618 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSLSYL +D+LKID+SF++ + E + I+ +A++L L++VAEG+ET Sbjct: 619 TGYSSLSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVAEGVETQA 678 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 Q + L+ Y QG+L S+ L E ++ +++L Sbjct: 679 QLDHLQALQCGYAQGYLISRPLTPEKTEQFLQEYL 713 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 95/454 (20%), Positives = 181/454 (39%), Gaps = 33/454 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 A ++ +++ +L + I D ++ + Sbjct: 372 AAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDTLG 431 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + + + F+ ++ A Sbjct: 432 HDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTE-----AVG 486 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN-ISIITWASTKMLQ-KGWHRQVFIW 246 ++I + Q E+ I + E+ ++ A M Q K R + Sbjct: 487 EKILAMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRNTVRF 546 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + A + L A++ + +HYQ V A+G+ +GAEAL Sbjct: 547 FDQQMQDAVTA----------RVALEGELHKALDRQQFRLHYQIQVD-ASGRPLGAEALI 595 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINLES 364 RW + + PD FI +A++T L P+ ++ + + W + P +++N+ + Sbjct: 596 RWMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSA 655 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 +R + + ++P+ + LELTE + + + ++ +E G + LDD Sbjct: 656 TQFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDD 715 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSL YL+ L +D +KID+SFV + + + II MA+ L L ++AEG+ET Sbjct: 716 FGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVET 775 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 +Q ++L+ +G + QG+L+ K +P E F + Sbjct: 776 EEQRQFLQDNGCTHFQGYLFGKPVPVEQFEAMLQ 809 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 93/451 (20%), Positives = 175/451 (38%), Gaps = 33/451 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND- 137 E+ R+++ + + + + D ++ + Sbjct: 494 EQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSASARSGQHGAVLFLDLDNFKTLNDTRGHD 553 Query: 138 -------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 + R A+ + F+ ++ S + AAI + +++ Sbjct: 554 VGDLLLTMAAERLQEAVRANDTISRQGGDEFMVLLNNLSPERHAAI-----SQAGRVAEK 608 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLP 248 I + EH I + + + A M Q K R + Sbjct: 609 IRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKRADAAMYQAKHAGRNQVRFFD 668 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + L + + L+ AI +HYQP + +G+I+GAEAL RW Sbjct: 669 PEMQA----------ELEQASALVVDLRQAIWQGQFQLHYQPQ-TANDGRIIGAEALLRW 717 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR--QHPQQHISINLESPV 366 + +SP FIPLA+++ L + ++ + W +++N+ + Sbjct: 718 RHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCKLAVNVSARQ 777 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFG 425 + +R ++ +P+ + LELTE + + + R+ G +DDFG Sbjct: 778 FRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFG 837 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSL+ L+ L ++ LKID++FV L + II M +TL ++++AEG+ET + Sbjct: 838 TGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKE 897 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 Q L ++G QG+L+S+ +P F Sbjct: 898 QLATLARYGCDAYQGYLFSRPVPAAQFAHLL 928 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 101/447 (22%), Positives = 179/447 (40%), Gaps = 36/447 (8%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGII--- 141 +++ I N ++ I D ++ S Sbjct: 358 LAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQIL 417 Query: 142 -----RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 R + T V + F+ + P + + A + ++ + + Sbjct: 418 QEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLA----------DLTIKLREQLQ 467 Query: 197 TRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 I + P ++I A M K R + + L Sbjct: 468 LPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNAK 527 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 L L+ AI+ D +HYQP + ++G++ G EAL RW + Sbjct: 528 TLD----------RLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRERG 577 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIP 373 +SP FIPLA++TGL L ++ + + +W RQ +S+N+ + Sbjct: 578 LISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGDFL 637 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 ++ ++ Q+ P I LELTE D +++ + RE G I +DDFGTG+SSL+ Sbjct: 638 DRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSSLN 697 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ L +++LKID+SFV + E + II +A+ L + +AEG+ET + + L+ Sbjct: 698 YLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDVLQA 757 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 G QG+ +++ +P F +W +Q Sbjct: 758 RGCRLMQGYFFARPMPPVIFDQWYQQQ 784 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 99/454 (21%), Positives = 179/454 (39%), Gaps = 28/454 (6%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++R ++Y + +L + D ++ S Sbjct: 260 EEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQLAIMLLDLDRFKGINDSLGHD 319 Query: 139 GIIRYMVAMGTAHYV-------VMIDPASFID-VIPYSSWQIDAAIIG--NAHNVVITSS 188 + + + V D D +I ++ + Sbjct: 320 AGDLLLQQVADRLRLRVRPYDTVSRDSEEQRDSLIARLGGDEFTILLEGITTPEAAARVA 379 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIW 246 + + + E + I I P ++ ++ A M K F + Sbjct: 380 RRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDLEILVKNADVAMYCAKDLGCSTFQF 439 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + L + L+ A E + +HYQP + +I+G EALA Sbjct: 440 YTQEMNSVSL----------QRLILETHLRKAFEKEEFFLHYQPQIDCVTNRIIGLEALA 489 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESP 365 RW + +SP SFIPLA++TGL L ++ +V + + W +++NL + Sbjct: 490 RWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQAAGIPLVRVAVNLSAR 549 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDF 424 + + ++ + + + LE+TE + + ++ +E G I +DDF Sbjct: 550 HFLKANLNKTIQQIRSRGAAARDHLDLEITEGMLMENAEEVVSVLGMLQETGVNISIDDF 609 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLSYL L LKID+SF+ D +E +V II +A +L ++VAEG+ETS Sbjct: 610 GTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALAHSLGKEVVAEGVETS 669 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 Q ++L+++G QG+L+S+ LP++ + Sbjct: 670 TQLQFLKENGCRVIQGYLFSRPLPEDKIRELLRE 703 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 167/410 (40%), Gaps = 24/410 (5%) Query: 113 PPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQI 172 D + D +R + + + + D++ + Sbjct: 293 RKDLPLSLMVVDIDRFRQLNQTLGHASGDELLRQVAGR----LSGSLRESDILGRLGTDV 348 Query: 173 DAAIIGN--AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITW 229 ++ + + + I +I ++ + G+ P ++ ++T Sbjct: 349 FGILLPDVADTHQASIVARRIIDTMIMPVRVAGQDVFATAGVGIVFYPQDGNDVHELVTN 408 Query: 230 ASTKM-LQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHY 288 A K R + + G+ G R L+ A + ++Y Sbjct: 409 AGIAGRHAKNLGRNSYQYYFPGMHEG----------ARDRMFLEIDLRHATLRNEFVLYY 458 Query: 289 QPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGD 348 QP S A+G+I G EAL RW + +SPD FIPL ++TGL + ++ + Sbjct: 459 QPKASCADGRITGVEALLRWQHPERGIVSPDQFIPLLEETGLIVQVGRWVLEEACRQAVE 518 Query: 349 WLRQHPQQH-ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSA 406 W +S+NL + L +E + + + +N + LE+TE D + Sbjct: 519 WQAAGLNIPSVSVNLSARQLQAETLLTDVAATLEKTGLNAACLDLEITESMLMDNADMAI 578 Query: 407 PIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHII 462 +S ++ G I LDDFGTGYSSL+YL+ +D +K+D+SFV + + ++T +I Sbjct: 579 QTLSALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFVQDIAADSDDASITRAVI 638 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 MA LKLK+VAEG+ET +Q L H QG+ +S+ +P Sbjct: 639 TMAHHLKLKVVAEGVETPEQLALLISHQCDVIQGYFFSRPMPASGMTELL 688 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 110/451 (24%), Positives = 190/451 (42%), Gaps = 37/451 (8%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 L E+ + + SS+ H + F ++ D + + Sbjct: 705 LAELDHLKHYDALTDLPNRALLEDRIESSITHARQYERFIGVIFLNLDHFHTVNDMLSHA 764 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 G R M A + + +F+ +P N + +++ Sbjct: 765 GGDQVLIATAKRLMDAAPAQASISRLSADTFVIALPDL----------NTSEEINRTAEL 814 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWH-RQVFIWL 247 IAQ I L + + + P+ + + ++ A + K R F + Sbjct: 815 IAQKIYQPLTVADQSVQLSARMGISVYPIDGNDATTLMKHADAALADAKQCGVRNSFRFY 874 Query: 248 PLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALAR 307 + ++ + L++AI + +HYQP V + G+I+GAEAL R Sbjct: 875 SSSMN----------EHAHKLLTMGAELRNAISQNRLVLHYQPQVDIITGQIIGAEALIR 924 Query: 308 WPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWL-RQHPQQHISINLESPV 366 + +SP FI +A++TGL P+ +IR M W ++ + I+INL Sbjct: 925 INHPERGIISPGEFISVAEETGLIIPMGTWVIREACRQMQQWHLDKNIELTIAINLSPLQ 984 Query: 367 LTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFG 425 L +P+++ ++ +N R + LE TE + + + I+++++ G + +DDFG Sbjct: 985 LHQSDLPEIVSLALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFG 1044 Query: 426 TGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSK 481 TGYSSLSYL+ VD LKID+SFV + + II + +TL + +AEG+ET Sbjct: 1045 TGYSSLSYLKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEA 1104 Query: 482 QEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 Q +LR QG+LYS LP E+F Sbjct: 1105 QLGYLRSVNCKEMQGYLYSAPLPAEEFAALL 1135 >UniRef50_Q47FF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FF8_DECAR Length = 996 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 91/402 (22%), Positives = 168/402 (41%), Gaps = 28/402 (6%) Query: 132 LTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS---- 187 L + + R A G A M+ S + G+ V++ Sbjct: 603 LILIDLDQLSRVNDAFGHAAGDAMLRRISVRLRKILRDGDFLGRLGGDQFGVLLAQGIRP 662 Query: 188 ------SDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGW 239 + ++ I + + + +L +++ ++ A + K Sbjct: 663 VVAEVVARKLLDAIAQPVMIEGSDIVTTASAGICLLGSDGHDVASLLRNADNALHHAKDS 722 Query: 240 HRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKI 299 + F + + + + L+ A+ ++ +HYQP V + +G+I Sbjct: 723 GQNAFRFFSADMNV----------RMAERLRLESDLRWALSRNELLLHYQPQVDINSGEI 772 Query: 300 VGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHI 358 +G E+L RW + +SP +FIPLA+++ L P+ ++ W + + Sbjct: 773 IGFESLLRWQHPELGMVSPVNFIPLAEESRLILPIGTWVLEEACRQNKAWQDAGMAPKVV 832 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGH 417 ++NL + I L+ + + + R + LE+TE DP+ I+ + G Sbjct: 833 AVNLSAVQFHGADIVALVSQSLQNSGLEARYLELEITESVIIEDPERVIRIMDELKMLGV 892 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMV 473 + +DDFGTGYSSLSYL+ +D +KID+SFV LE + +I +A+ L+ K++ Sbjct: 893 GLSIDDFGTGYSSLSYLKRFPIDKIKIDRSFVRDLEHNTNDAAIIRMVIGIAEELERKVI 952 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 AEG+ET +Q E+LR H QG+ S +P + Sbjct: 953 AEGVETVEQLEFLRSHHCDEYQGFYCSPGVPAGEIPDLVASR 994 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 107/523 (20%), Positives = 198/523 (37%), Gaps = 24/523 (4%) Query: 6 LVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQE 65 ++ + S L +S L + Y+ RVA ++ D E Sbjct: 190 MLVTVIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKNYAIRVAKPSDDEIGLLYDGFNE 249 Query: 66 LERWQGAACSE--AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKI 123 + ++++++ + +L I Sbjct: 250 MLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFI 309 Query: 124 SKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV 183 D ++ + ++ + V+ + + + + + + NA N Sbjct: 310 DLDHFKDINDTLGHRTGDLLLIDVANRLSTVVRSCDT-VARLGGDEFTVFTQNVMNADNA 368 Query: 184 VITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHR 241 I + ++ Q E I + P + ++ A M K + Sbjct: 369 AI-VAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKACGK 427 Query: 242 QVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVG 301 V+ + + L+ A+E + +HYQP V L G + Sbjct: 428 NVYKMFDRKMN----------EHANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTS 477 Query: 302 AEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQ-QHISI 360 EAL RW L+PD FI L++++G LT ++R+ W Q+ +++ Sbjct: 478 VEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAV 537 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKT-SAPIISRYREAGHEI 419 NL + + + + +++ + P + +E+TE + + RE G I Sbjct: 538 NLSPYHFQRQDVKEAIFSVLDATGLEPALLEIEITESALMQNDEYTCALFRELRELGMTI 597 Query: 420 YLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAE 475 +DDFGTGYSSLSYL ++ LKID++F+ + E + + II MAK+L +++VAE Sbjct: 598 SVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAE 657 Query: 476 GIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA--EQHL 516 G+ET Q E L+ G H QG+L S+ + E ++ E HL Sbjct: 658 GVETVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQFFTPENHL 700 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 108/447 (24%), Positives = 188/447 (42%), Gaps = 26/447 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ ++Y + + +LE T I D +RV S + Sbjct: 318 QSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLS 377 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQG 194 + +V + + D + I ++ E+ Sbjct: 378 YQAGDQLLVMVSKR----FLSCLRVDDTLARPGGDEFVLIQEALADPQEATETARELLAS 433 Query: 195 IITRLQK-TPGEHIENNGIIYDILPLPEM-NISIITWASTKMLQ-KGWHRQVFIWLPLGL 251 + Q E I + P ++ A M K R F + + Sbjct: 434 LDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQM 493 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANG-KIVGAEALARWPQ 310 LA L+ A+ENR++ ++YQP LA+ ++GAEAL RW Sbjct: 494 NADALA----------RLQMEMALRQAVENRELLLYYQPQWQLADSPSVIGAEALIRWRN 543 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTS 369 +G ++PD FIPLA+++GL + +I + W Q Q +++N+ + + Sbjct: 544 KEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRA 603 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGY 428 + +++ + +++ LELTE + P+ +A +++R G I LDDFGTGY Sbjct: 604 GNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGY 663 Query: 429 SSLSYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSL+YL + +LKID+SFV L +++ + II +A + L++VAEG+ET +Q Sbjct: 664 SSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRA 723 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRW 511 +L+ G QG+L+S LP E F + Sbjct: 724 YLQSRGCDLAQGFLFSPPLPAEQFAEF 750 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 102/450 (22%), Positives = 173/450 (38%), Gaps = 34/450 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ ++ I ++ + D ++ S Sbjct: 424 ENQLLYLANYDALTGLPNRIHLIERLKQAIPLAERNGQHLALLFLDLDRFKGVNDSLGHA 483 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + V F+ ++ + DA I +++ Sbjct: 484 SGDLLLVEVSKRLSNCVRKGDTVARFGGDEFVFLLEGLEEREDAKPI----------AEK 533 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISII-TWASTKMLQKGWHRQVFIWLPL 249 I + + + N I P + ++ A M + + + Sbjct: 534 ILGALNAPFEIDNVQVFMNGSIGISTWPHDGESSDLLLRRADAAMYRAKELGNSYAFYNP 593 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 + + R S L+ A+E + + +QP + LA G VGAEAL RW Sbjct: 594 EIGA----------LPERRFSMERELRRALERNEFELFFQPQIDLATGNCVGAEALIRWR 643 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLT 368 + + PD FIP+A+ TGL P+ +IRS + W +++N+ Sbjct: 644 HPEKGLILPDQFIPVAESTGLIVPMGAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFE 703 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGY 428 + Q L + V+ R + +E+TE ++ + G I +DDFGTGY Sbjct: 704 RGGLIQTLESSMRESGVDSRLLEIEVTESVLMQHPMASDTLRELSRMGILISIDDFGTGY 763 Query: 429 SSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLSYL+ L V LKID+SFV L +T I+ M L+LK +AEG+E+ +Q + Sbjct: 764 SSLSYLKKLPVYKLKIDRSFVTTLPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLD 823 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 LR+ G QG+ YS+ LP + F+ W + Sbjct: 824 ILRRLGCDEIQGYYYSRPLPNDTFMTWVRE 853 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 110/439 (25%), Positives = 184/439 (41%), Gaps = 24/439 (5%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYM 144 ++Y I ++ I D ++ S + Sbjct: 460 IAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHASGDLVL 519 Query: 145 VAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQGIITRLQKT 202 + G + + ID + +I +NV+I +I + + + Sbjct: 520 IECGKRLKKAIRE----IDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVN 575 Query: 203 PGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMF 260 I I P + ++ A M Q K + + + + Sbjct: 576 ENIFHITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKNTYHFYTKEMTEQAYN--- 632 Query: 261 VLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS 320 + L+DA++N+ ++YQP V + KIVG EAL RW + PD Sbjct: 633 -------RLLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDH 685 Query: 321 FIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDM 379 FIPLA++TGL PL II + + +W + + I+IN+ + L + L Sbjct: 686 FIPLAEETGLIIPLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTA 745 Query: 380 INHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLD 438 +N P I +E+TE +P+ + ++S+ R G I +DDFGTGYSSL+YL+ L Sbjct: 746 LNKNNCQPDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLP 805 Query: 439 VDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYG 494 + +KID+SFV L + +T II M+++L L ++AEGIET +Q+ ++ Q G Sbjct: 806 ITKVKIDRSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLI 865 Query: 495 QGWLYSKALPKEDFLRWAE 513 QG+ YS+ L K+ E Sbjct: 866 QGYYYSRPLTKKAMTAKLE 884 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 93/448 (20%), Positives = 181/448 (40%), Gaps = 28/448 (6%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 + +++ + +L+ + D ++ S Sbjct: 518 EDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTVNDSLGHA 577 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHN--VVITSSDEIAQGII 196 + A+ + + D + ++ + + + + + Sbjct: 578 AGDELLRAVAARLRGALREE----DTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVLA 633 Query: 197 TRLQK-TPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVI 253 E I P + +++ A M K R + + L Sbjct: 634 APFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGRNTYGFYTEDL-- 691 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 +R + RL+ A+E+ + V+YQP++ + +G+++GAEAL RW G Sbjct: 692 --------IRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWK-PQG 742 Query: 314 S-WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEK 371 +SP +FIP+A++TGL L ++R + +W+ +++NL + + Sbjct: 743 EPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRRQD 802 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSS 430 + +L ++ + Q+ LE+TE + + + ++ R ++ G + +DDFGTGYSS Sbjct: 803 VSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTGYSS 862 Query: 431 LSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ +D LKID+SFV + + I+ MA+ L + + AEG+E Q E L Sbjct: 863 LAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQLELL 922 Query: 487 RQHGVHYGQGWLYSKALPKEDFLR-WAE 513 R G QG+L S LP ++F + Sbjct: 923 RGLGCGSYQGYLCSPPLPADEFEARFLR 950 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 108/492 (21%), Positives = 190/492 (38%), Gaps = 43/492 (8%) Query: 48 VAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSS 107 + R + + +A L+R +R ++Y N Sbjct: 90 LLSRDVQYMLRASNAFNSLKRQ---------EDRLRYLAYYDPLTSLPNRRSFNEQLNRI 140 Query: 108 LEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPA---SFID- 163 L+ T I D ++ S R +V + V + + + D Sbjct: 141 LKRCRRHKTNAALLFIDLDHFKRINDSIGHGRGDRLLVEIAKRLTVELREDDAINYYSDN 200 Query: 164 -----------VIPYSSWQIDAAIIGNAHNV--VITSSDEIAQGIITRLQKTPGEHIENN 210 I ++ + N V + I + + + Sbjct: 201 SAEDDSNNSNTEIARLGGDEFTVVLSDIPNAGQVERVAQRILAALSEPIALQSHNPVVTP 260 Query: 211 GIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRI 268 + + P E +++ A T M K R F + + + Sbjct: 261 SVGIALFPQDGEDPDTLVRNADTAMYAAKAQGRACFRFYDEEMNAKAVE----------Q 310 Query: 269 QSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQT 328 L+DA++N ++ + YQP V A G +V EAL RW + +SP FIP+A++T Sbjct: 311 LKMEEELRDAMQNNELELRYQPQVDTATGDVVSMEALVRWKHSTRGMVSPLDFIPVAERT 370 Query: 329 GLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNP 387 G L +++ V W P + +N+ +P+ + + + + Sbjct: 371 GQIIELGEWVMKEVARHCNYWDSMGLPPFRVCVNISPLQFNQSDLPRSIGEFLRESGMQA 430 Query: 388 RQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDK 446 ++ LELTE D +T+ + + + G E+ +DDFGTGYSSLSYL+ +D LKID+ Sbjct: 431 SRLELELTESAIMTDAQTNIEKLQQLKALGLELAVDDFGTGYSSLSYLKRFPIDTLKIDQ 490 Query: 447 SFVDALEY---KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKAL 503 SFV L + II ++KTL L+++AEGIE +Q ++L G QG+ +++ + Sbjct: 491 SFVADLGTTDGAAIVDAIIALSKTLNLRVIAEGIEEKEQLDYLVARGADLLQGYFFARPI 550 Query: 504 PKEDFLRWAEQH 515 ED Q+ Sbjct: 551 YPEDVPDMLRQN 562 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 173/449 (38%), Gaps = 33/449 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ ++++ S+L I D ++ + Sbjct: 447 QDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAVFFIDLDNFKNLNDTAG 506 Query: 137 DL--------GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + A V + FI ++ N V Sbjct: 507 HDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVDE-----SNVLAQVKDIV 561 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQ-KGWHRQVFIWL 247 ++ I L + I + + + ++ + M Q K + + + Sbjct: 562 AKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQAKSSGKNTYRFF 621 Query: 248 PLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALAR 307 L + L+ A+ N+ + +HYQP ++GAEAL R Sbjct: 622 DP----------VAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQT--LIGAEALLR 669 Query: 308 WPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLR--QHPQQHISINLESP 365 W D +SP FIPLA+ TGL P+ +IR + + W + + I++N+ + Sbjct: 670 WKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSAR 729 Query: 366 VLTSEKIPQLLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDF 424 + + +R ++N Y V+ ++ LELTE D + + + R G LDDF Sbjct: 730 QFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDDF 789 Query: 425 GTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETS 480 GTGYSSLS+L+ L +D +KID+SF+ + + + II M + L L ++AEG+ET Sbjct: 790 GTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVETD 849 Query: 481 KQEEWLRQHGVHYGQGWLYSKALPKEDFL 509 +Q +L + QG+L + + F Sbjct: 850 EQLAFLTELDCLDIQGFLLGRPSSIDKFE 878 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 104/416 (25%), Positives = 166/416 (39%), Gaps = 34/416 (8%) Query: 113 PPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMG--------TAHYVVMIDPASFIDV 164 PD + D ++ S + A+ V + F+ + Sbjct: 322 GPDARLAVLYLDMDNFKTVNDSLGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVVL 381 Query: 165 IPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMN- 223 +P S+ + T S I E I + P + Sbjct: 382 LPLSA--------EGDGELAETESARIQDSFTRPFNAADHELYVMPSIGISVAPEDGRDP 433 Query: 224 ISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENR 282 +++ A M K F + + R + ++ +EN Sbjct: 434 ATLLKNAEIAMYRAKEQGGARFRRFTQAMNDDV----------TRRLAIEKSIRKGLEND 483 Query: 283 DICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 + V YQP V + G++ G EAL RW + DG+ + P FIP+A+ TGL L ++R Sbjct: 484 EFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVLRDA 543 Query: 343 FEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-D 401 W + I++N+ + + ++ + + P Q+ LE+TE D Sbjct: 544 CIQTRRWTDELGPLRIAVNISARQF-QPDLLDRVQAALAESGLPPSQLELEITETTMMRD 602 Query: 402 PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNV 457 TS I+ R G I +DDFGTG+SSL YL++ +D +KID+SFV + + Sbjct: 603 LPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATI 662 Query: 458 TPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 I+ M + L L +VAEG+ET Q +LR HG QG+ YSK LP + F W Sbjct: 663 VSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPADGFADWMR 718 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 97/450 (21%), Positives = 179/450 (39%), Gaps = 25/450 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + +++ + N +L + D ++ S+ Sbjct: 707 ESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLDLDRFKDINDSYG 766 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA--HNVVITSSDEIAQG 194 L + + + D + A ++ + + + E+ G Sbjct: 767 HLAGDELLKYVAQR----LTQRLRQSDTLARLGGDEFALLMHDLRHDDDAARLASELLSG 822 Query: 195 IITRL-QKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIWLPLGL 251 + E I I P +++ A + KG R V+ + + Sbjct: 823 LSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGRGVYRYYADEM 882 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 RI R RL+ A+ + + +HYQP V L +G+I+GAEAL RW Sbjct: 883 T----------RIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDP 932 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSE 370 + + P FIP+A+ TGL + ++ WL P +++N+ Sbjct: 933 EQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQA 992 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGTGYS 429 + + ++ + P + LELTE + + + ++ R R G + +DDFGTGYS Sbjct: 993 DLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYS 1052 Query: 430 SLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SL+ L+ +D+LKID+SF+ + + II M +L + ++AEG+ET++Q + Sbjct: 1053 SLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAF 1112 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 L+Q QG+L S+ LP + F + + Sbjct: 1113 LQQRNCDRYQGFLRSRPLPAQAFEQLLREQ 1142 >UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74EC6_GEOSL Length = 799 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 106/455 (23%), Positives = 190/455 (41%), Gaps = 28/455 (6%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +R +++ I L + D +++ + Sbjct: 339 QSEEMIRYLAHHDSLTGLPNRIFFGEMLELVLSRARRDGKQVAILFVDLDDFKLINDTLG 398 Query: 137 DLG--------IIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH--NVVIT 186 R + ++ YV + I +GN + V+ Sbjct: 399 HAAGDHLLREAAQRLKGCVRSSDYVASGAESGLCGNIARFGGDEFILSLGNLDSVDDVVA 458 Query: 187 SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVF 244 + I + E + I + P + S++ A M K F Sbjct: 459 VTQRIISEFSREFRIDGHEIFVSVSIGISMYPDDAEDTGSLVRNADMAMFAAKEEGGPSF 518 Query: 245 IWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEA 304 + G+ ++ S L+ A+E +I VHYQP V L+ G+I G EA Sbjct: 519 RFFTRGMN----------EAAQQRLSIELSLRKALERGEIFVHYQPKVDLSCGEITGFEA 568 Query: 305 LARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLE 363 LARW + + PD+FIPLA++ GL + ++R+ W+ + ++INL Sbjct: 569 LARWHHPELGLIPPDTFIPLAEKNGLIVRIGEWVLRAACAQARTWIDEGFSDLCMAINLS 628 Query: 364 SPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLD 422 S TS + +++++++ ++ P + E+TE + + + I+S R+ G I +D Sbjct: 629 SHQFTSGNLTSMVKEVLDETELPPSCLEFEITEGILMERTEKTMRILSELRDMGVRISID 688 Query: 423 DFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIE 478 DFGTGYSSL YL+ V+ +KID+SFV ++ + II +A+ L L++VAEG+E Sbjct: 689 DFGTGYSSLGYLKRFPVNTVKIDRSFVREIDSPHEDAAIIKAIIAVARNLNLQVVAEGVE 748 Query: 479 TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 + +Q E+L HG + QG+L+ K + ++ Sbjct: 749 SHRQTEFLLAHGCNEAQGFLFGKPVHPDEASLMLR 783 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 91/447 (20%), Positives = 175/447 (39%), Gaps = 26/447 (5%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 E+ +Y + SL + T I D +++ S Sbjct: 314 EKELVHQAYHDPLTGLPNRVFLQRRLADSLAQAARERTRVALLFIDLDNFKLINDSLGHD 373 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGII 196 R + +G ++ D+ +I + + ++D +A + Sbjct: 374 AGDRVLSELGKR----LLGCIRCGDMAARFGGDEFMVLINGTPGTDAALAAADRLAATLA 429 Query: 197 TRLQKTPGEHIENNGIIYDILPL-PEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 E + I + + +I A M K + + + Sbjct: 430 EPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADAAMHRAKLLGKARRVVFDPAMYAQ 489 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + + L+ +E + ++YQP++ + + V EAL RW + Sbjct: 490 AVE----------RLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHPERG 539 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTSEK 371 +SP FIP+A++TGL PL ++ + W P +S+NL + Sbjct: 540 LISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRHPS 599 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + + ++ + P + LE+TE D ++ + ++ G ++ +DDFGTGYSS Sbjct: 600 LTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGYSS 659 Query: 431 LSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 LSYL+ D +KID+SF L+ + + +I A L+L++ EG+ET +Q E+L Sbjct: 660 LSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLEFL 719 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAE 513 + G QG+L++ +P ++ R+ Sbjct: 720 ERVGCDLVQGFLFAPPMPPDEVARFLH 746 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 106/502 (21%), Positives = 185/502 (36%), Gaps = 40/502 (7%) Query: 27 WLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS 86 W L + +R DA+ + + H + +++ Sbjct: 563 WNGEITQLRKDGTALVVEAHWTLLRDE---NDQPDAILAINTNVTERKAAEHKVH--QLA 617 Query: 87 YSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL-------- 138 + ++ + I D ++ + Sbjct: 618 FYDPLTGLPNRELLGDRLQHAM--QVRHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQQ 675 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 R + + + F+ V+ S A G+A ++ ++I Sbjct: 676 IAQRLQTCLRKGDTLARVGGDEFVIVLEGLS-----ASPGDAGSLATRVGEKILASFARP 730 Query: 199 LQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLL 256 Q H I + + + A M Q K R + + + Sbjct: 731 FQLADYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHGRNALRFFDPAMQAVVA 790 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 A L++A+ +HYQ V G + GAEAL RW W+ Sbjct: 791 A----------RAELEVDLREALRLGAFELHYQAQVDAR-GCVSGAEALLRWQHPQRGWI 839 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINLESPVLTSEKIPQ 374 +P SFIPLA++TGL PL L ++ + W + + +++N+ + Sbjct: 840 APASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQADFAA 899 Query: 375 LLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 + I +PR++ LELTE D + +S + G LDDFGTGYSSL+Y Sbjct: 900 QVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAY 959 Query: 434 LQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ L +D +KID+SFV + ++ I+ + ++L L++VAEG+ET Q +L +H Sbjct: 960 LKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEH 1019 Query: 490 GVHYGQGWLYSKALPKEDFLRW 511 G QG+L+++ P F W Sbjct: 1020 GCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_C6P3U3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3U3_9PROT Length = 600 Score = 479 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 104/510 (20%), Positives = 187/510 (36%), Gaps = 63/510 (12%) Query: 30 HQQVETSFIEEL---DTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS 86 + E L ++ + + N + + ++ R+ Sbjct: 120 WRHELAQEKERLLQEIQSANVLLSQLNLELASAMEHKDSQIKRIAHY--DSLTALPNRLL 177 Query: 87 YSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVA 146 + R QEVA + + + L + G + Sbjct: 178 FLDRLDQEVARANRDDQMVAVLSLDLDRFKKVNESFGHPVG-----DQLLQTVAKKLSSQ 232 Query: 147 MGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII-TRLQKTPGE 205 + V I F V+ A + + +I + + + E Sbjct: 233 IRACDTVARIADDEFAIVL----------TGVKATHAAGEVAQKILDSFAHSPISISDSE 282 Query: 206 HIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLR 263 I I P+ +N + ++ A T + Q K R F + + + Sbjct: 283 VFITLSIGISIYPVDGVNTTALLKSADTALHQAKREGRNNFQYYTVQMNA---------- 332 Query: 264 ILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIP 323 + L+ A+ + +HYQP V + KIVG EAL RW + ++P FIP Sbjct: 333 TSWQRLKLETELRQALARNEFELHYQPKVDMDCNKIVGMEALLRWQSAERGLVTPAEFIP 392 Query: 324 LAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINH 382 L ++TGL P+ ++R + W P HI++NL S + ++ Sbjct: 393 LLEETGLILPVGEWVLREACKQARAWQDAGIPDVHIAVNLSSLQFRQPDFAGSVLKIMQE 452 Query: 383 YQVNPRQIALELTEREFA--------------DPKTSAPIISRYREAGHEIYLDDFGTGY 428 + ++P + + ++ EAG +DDFGTGY Sbjct: 453 HGLDPA-----------MNGIELELTESLLLDNVARTIDTLNTLHEAGIRFSIDDFGTGY 501 Query: 429 SSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLSYL+ + LKID+SFV L + +++ II + ++L L ++AEG+ET++Q Sbjct: 502 SSLSYLKRFPISSLKIDQSFVQDLSSNRDDESIVSAIIALGRSLGLSVIAEGVETAEQSA 561 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 LR+ G QG+L+S+ +P + + Sbjct: 562 QLRRMGCDGMQGYLFSRPVPVAEMTYLLQN 591 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 479 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 106/505 (20%), Positives = 186/505 (36%), Gaps = 40/505 (7%) Query: 27 WLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVS 86 W L+ + +R + Q + + S + E+ ++ Sbjct: 565 WRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQA---IFAINTDITQRKSAEN--EILHLA 619 Query: 87 YSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND--------L 138 +L + I D +++ + Sbjct: 620 LYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQ 679 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVI-PYSSWQIDAAIIGNAHNVVITSSDEIAQGIIT 197 R + + V + F+ ++ D A+ + T + I I Sbjct: 680 VAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHDEAL-----TQISTICERIRSAFIQ 734 Query: 198 RLQKTPGEHIENNGIIYDILPL-PEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGL 255 P H I + + ++ A M Q K R + + Sbjct: 735 PFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAA- 793 Query: 256 LAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSW 315 + L + E + +HYQ V + I+GAEAL RW Sbjct: 794 ---------MNARAILESELYKSWERNEFILHYQLQVD--SRGIIGAEALVRWQHPRRGL 842 Query: 316 LSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW--LRQHPQQHISINLESPVLTSEKIP 373 L P FIP A++TGL PL ++ + + W + Q ++S+N+ S Sbjct: 843 LPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQFCQPDFV 902 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + + +++ NP+++ LELTE D + + + G LDDFG GYSSL Sbjct: 903 EQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFGIGYSSLY 962 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 YL+ L +D +KID+SFV + + I+ +AK++ L ++AEG+ET Q+++L Sbjct: 963 YLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGAQKDFLAS 1022 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAE 513 HG QG+L+S+ LP E F R+ + Sbjct: 1023 HGCTAYQGYLFSRPLPLEQFERFVQ 1047 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 479 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 173/449 (38%), Gaps = 24/449 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 ++ ++ + N ++ + D ++ + Sbjct: 191 EQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLG 250 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQG 194 + + + +D + + I+ N ++ I + Sbjct: 251 HCAGDELLKEVARRLAGAVRG----LDTVGRTGGDEFVLILPSINQPGEAAQIAERILRT 306 Query: 195 IITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLV 252 I Q + I ++P +I +++ A M K R F + + Sbjct: 307 IQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMN 366 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 + +RL+ A+E + + YQP +A +++G EAL RW D Sbjct: 367 TQVAE----------RLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALLRWRDPD 416 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEK 371 + P FIP+A+ TGL PL ++ WLR +++N+ + L Sbjct: 417 EGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHD 476 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 +R+ + + + + LE+TE D ++ ++ + G + +DDFGTGYSS Sbjct: 477 FIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSS 536 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ D++KID+SF+ L E + I+ +A L ++ +AEG+E Q+ +L Sbjct: 537 LAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFL 596 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 + G QG+L L +E R EQ Sbjct: 597 QTLGCEAMQGYLLGSPLAEEMMTRRLEQQ 625 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 100/388 (25%), Positives = 170/388 (43%), Gaps = 28/388 (7%) Query: 143 YMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS----------SDEIA 192 ++G A ++ S A I G+ +N++IT +++I Sbjct: 467 INDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANKIL 526 Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLG 250 + + I + P + +++ A + K R + + Sbjct: 527 SSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQGRNNYQFYNPA 586 Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 L L +RL+ A+E ++ V YQP V++ G++ GAEAL W Sbjct: 587 LNTRTLE----------RVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLH 636 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTS 369 + LSP FIP+A++ G + ++ + W + ++++N+ S Sbjct: 637 PELGLLSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRR 696 Query: 370 EKIPQLLRDMINHYQVNPRQIALELTE-REFADPKTSAPIISRYREAGHEIYLDDFGTGY 428 + +R ++N + PR + LE+TE D + + P ++ +DDFGTGY Sbjct: 697 PDLVDQVRRVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGY 756 Query: 429 SSLSYLQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEE 484 SSLS L+ L + LKIDKSF+ K + II MA LKL+++AEG+E + Q E Sbjct: 757 SSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLE 816 Query: 485 WLRQHGVHYGQGWLYSKALPKEDFLRWA 512 +L Q+ QG+LYS+ +P EDF R Sbjct: 817 FLHQNHCDQMQGFLYSRPIPAEDFRRLI 844 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 25/413 (6%) Query: 114 PDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQID 173 PD + D ++V S + +V + + + D + Sbjct: 334 PDQIFAVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTACVRES----DTLARLGGDEF 389 Query: 174 AAIIGNAHN--VVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLP-EMNISIITWA 230 ++ + + I Q + E + + + + ++ A Sbjct: 390 TVLLEGIKDLSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVALSTMGYDDPEQLLHNA 449 Query: 231 STKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQ 289 M K + + + L+ AIE ++ +HYQ Sbjct: 450 DAAMYRAKALGKAQWEVFTADM----------HSNASAQLQLEVDLRRAIERQEFQLHYQ 499 Query: 290 PIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDW 349 PI L IVG EAL RW +SP FIP+A++TGL P++ +++ + W Sbjct: 500 PIFHLETAAIVGFEALLRWHHPLRGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRW 559 Query: 350 LRQHP---QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTS 405 Q P +S+N S + + + D+++ + P+ + LE+TE + + + Sbjct: 560 QTQFPLEVPLFVSVNFSSKQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEAT 619 Query: 406 APIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKN---VTPHII 462 A + + G ++ +DDFGTGYSSLSYL VDILK+D+SFV A++ + I Sbjct: 620 AAKLLEIKALGIQLGIDDFGTGYSSLSYLHRFPVDILKVDRSFVSAMDSHENLQIVHTIT 679 Query: 463 EMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +++ L ++ VAEG+ET++Q LR Y QG+ +SK + H Sbjct: 680 MLSQNLGMRAVAEGVETAEQAAQLRAMNCQYAQGYFFSKPIDASSMEHLLAHH 732 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 117/504 (23%), Positives = 197/504 (39%), Gaps = 45/504 (8%) Query: 30 HQQVETSFIEELDTYSSRVAIRA----NKVATQGKDALQEL---ERWQGAACSEAHLMEM 82 + + +SS R + + D + E+ + AA + Sbjct: 993 FTITIKTGETRIWNFSSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLP 1052 Query: 83 RRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIR 142 R+ R Q + I D ++V S + Sbjct: 1053 NRILLLDRIEQAIKRTQQEEKY------------LFALLFIDLDRFKVVNDSLGHWVGDQ 1100 Query: 143 YMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGIITRLQ 200 + A+ + P +D + ++ N + + +I + + Sbjct: 1101 LLGAIADK-LKACVRP---MDTVARFGGDEFVILLENLTSRTEATKMAQQITDELRSSFC 1156 Query: 201 KTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGLVIGLLAA 258 + + I E + S ++ A M K R + + I Sbjct: 1157 LQGQDFFISVSIGITFPSSYEESASELLRNADIAMYRAKEKGRARYTIFDSKMHIQ---- 1212 Query: 259 MFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSP 318 R+ L+ A+E ++ VHYQPIVSL GK++G EAL RW +SP Sbjct: 1213 ------ATRLLELETNLRLALEREELIVHYQPIVSLTTGKLLGFEALVRWEHPKKGLISP 1266 Query: 319 DSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ---HISINLESPVLTSEKIPQL 375 FIP+A++TGL PL ++ M W ++ +S+NL L + Sbjct: 1267 GEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKEFSGLDKIRVSVNLSGKQLEYPHLINC 1326 Query: 376 LRDMINHYQVNPRQIALELTEREFADPKTSA-PIISRYREAGHEIYLDDFGTGYSSLSYL 434 L ++ + + + LE+TE + K ++ + + +I +DDFGTGYSSLSYL Sbjct: 1327 LESILKQTGLEGKNLKLEITESMLMNNKEVVSDLLLQIKGKNIQISIDDFGTGYSSLSYL 1386 Query: 435 QDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHG 490 L VD LKID+SFV+ + E + II +A L++ +VAEG+ET + + L+Q G Sbjct: 1387 HYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINLAHHLQMDVVAEGVETEQHIKQLKQLG 1446 Query: 491 VHYGQGWLYSKALPKEDFLRWAEQ 514 GQG+ +SK L + W E+ Sbjct: 1447 CESGQGYFFSKPLDSQKVTSWFEK 1470 >UniRef50_Q7NVN4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN4_CHRVO Length = 679 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 109/521 (20%), Positives = 198/521 (38%), Gaps = 34/521 (6%) Query: 10 ISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERW 69 + I +++ + ++ L + + S ++VA + + R Sbjct: 169 WVTLAICALMAVLFVAQMLVVRLAGRIIDRQAAALSETNRELDSRVAARTWELANANARL 228 Query: 70 QGAACSEA-HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGY 128 + + +++ + +L P I D + Sbjct: 229 EDEIQERRRAEERLDHLAHHDPLTGLPNRLLFQKRLSRALSVPDLPPYKLAMLFIDLDRF 288 Query: 129 RVWLTSHND--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA 180 + + R ++ + + FI V+ Sbjct: 289 KDVNDTLGHYIGDQLLNAVAARLADSIRAEDMLARLGGDEFICVLESIE----------N 338 Query: 181 HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKG 238 ++ + ++ + + I ++ +++ A M K Sbjct: 339 RDMAADVAGKLLALFRQPFCINGNDLYLSASIGISFAGNDGADVDTLLRHADIAMYSAKN 398 Query: 239 WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK 298 R + + +L+ A++N +I VHYQP V GK Sbjct: 399 AGRNRCQHYSPQM----------SEDAEQRVVLERQLRQALDNDEITVHYQPQVDAVTGK 448 Query: 299 IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH- 357 +VGAEALARW + P FIP+A++ GL L I+ + W Sbjct: 449 LVGAEALARWRHPILGMVPPARFIPVAEECGLIVALGEQILEKSLRQLASWHEAGFPLPS 508 Query: 358 ISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGH 417 +S+NL + L + PQ + ++ Y++ PR + LE+TE + + I++ R G Sbjct: 509 VSVNLSARQLERQDFPQHVARLLKRYRLEPRHLELEITESVIMATEDAVNILAELRAQGI 568 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEY--KNVTPHIIEMAKTLKLKMVAE 475 + +DDFGTGYSSLSYL+ L V +LK+D+SF+ + + + I+ ++ +L L+ VAE Sbjct: 569 RLSIDDFGTGYSSLSYLRQLPVQVLKVDRSFILGIGKGGEAIVHAIMALSSSLGLETVAE 628 Query: 476 GIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 G+E + Q E+LR G H QG+LY+ LP E F L Sbjct: 629 GVEEASQLEFLRSAGCHIIQGFLYAAPLPAESFADGWRDRL 669 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 102/447 (22%), Positives = 189/447 (42%), Gaps = 24/447 (5%) Query: 78 HLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND 137 + ++Y +L++ +T D ++ S Sbjct: 378 SEERITYLAYYDALTGLANRTLFIDHANQALKNHKSTETLLAFYFFDIDNFKFINDSLGH 437 Query: 138 LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN--AHNVVITSSDEIAQGI 195 + +G VM + +D + A + + + + +I + Sbjct: 438 TKGDILLQMVGARLKRVMTE----VDTVARFGGDEFAILKVDVSNKSSAAEFAQKILDIL 493 Query: 196 ITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIWLPLGLVI 253 + + + P + ++ + M K R + + L++ Sbjct: 494 SQPFHIMGRDLFTTISMGIALSPNDGVTSAELLKNSDMAMYKAKELGRNNYKFYTNELIL 553 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 + + L+ AI+N ++ + +QP +S ++ GAEAL RW + Sbjct: 554 ----------RSEKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHPER 603 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKI 372 W+ P FIP+A+ +G+ E + ++ W ++ P +SIN+ L Sbjct: 604 GWVPPIEFIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQLARANW 663 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 ++ I Y +NP +I LELTE +P+ S E G ++ +DDFGTGYSSL Sbjct: 664 SHRVQATILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSL 723 Query: 432 SYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 SYL+ ++ D++KID+SFV L + + + II MA +L L+++AEG+E Q + L Sbjct: 724 SYLKKINADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLH 783 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWAEQ 514 G H QG+LYSK LP+++F+ + ++ Sbjct: 784 DLGCHMIQGYLYSKPLPEDEFVVFVQK 810 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 101/505 (20%), Positives = 185/505 (36%), Gaps = 41/505 (8%) Query: 22 VGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLME 81 V L + + + + S +S +A + + +E R+ +A Sbjct: 636 VSLGVVELYSRSKRSPDTHALAMASGIANQTGHFL--LRRQAEENLRFIAN--HDALTGL 691 Query: 82 MRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGII 141 R+ + + Q + + + D ++V + Sbjct: 692 PNRLMFKAEFEQALTRARASG-------------QALHVIFVDLDEFKVVNDTIGHNAGD 738 Query: 142 RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVI--TSSDEIAQGIITRL 199 + M + +++I ++ + I + I + Sbjct: 739 IVLREMADR----LRGSLEEVELITRFGGDEFVVLLDPKGDSTILDRTIARIQAALAPGF 794 Query: 200 QKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIGLLA 257 E I P + +++ A M K + + + G+ Sbjct: 795 VVNESELRMTASIGISSFPEDGSDWQTLLKHADLAMYGAKQLGKNGYQFYCRGMSAS--- 851 Query: 258 AMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLS 317 L+R L A+E + ++YQP ++LA+G EAL RW + + Sbjct: 852 -------LQRRIDMESHLHRALEQDEFILYYQPRIALASGACTAVEALIRWRHPELGLVM 904 Query: 318 PDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLL 376 P FIP A+Q+G + +R W Q P +S+NL + + + + Sbjct: 905 PGDFIPFAEQSGAIVEIGAWALREACRQNAAWRAQGLPPVRVSVNLSARQFADKSLRLTI 964 Query: 377 RDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQ 435 D + + + LELTE D + ++ +SR + G + +DDFGTGYSSL+YL Sbjct: 965 IDALRQAGLPGNLLELELTESMVMRDAEQASSWLSRLKRTGVRLAIDDFGTGYSSLAYLS 1024 Query: 436 DLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGV 491 +D +KID SFV + +T +I + L L++VAEG+E Q E+LR+ G Sbjct: 1025 RFPIDTVKIDGSFVRYIPESRSDTQITSAVIGLGHRLGLEVVAEGVENEVQLEFLRREGC 1084 Query: 492 HYGQGWLYSKALPKEDFLRWAEQHL 516 QG+ +S LP + + Sbjct: 1085 DEVQGYYFSHPLPPAKITAFLASRM 1109 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 105/445 (23%), Positives = 178/445 (40%), Gaps = 33/445 (7%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND------- 137 +++ + +L I D ++ + Sbjct: 156 LAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDLDNFKALNDTKGHHIGDELL 215 Query: 138 -LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 R + + I F+ ++ + + A + + + Sbjct: 216 IQVAQRIQTIVREGDTLARISGDEFVVLLEGLAHEE-----SKAAQEAEKFATRVKYLLN 270 Query: 197 TRLQKTPGEHIENNGIIYDIL-PLPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 + EH ++ I + P+ +++ A M Q K R + + Sbjct: 271 EPYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQAKEKGRNRICFYDPLMQ-- 328 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + + H L+ A+ ++ + YQP V+L GKIVG EAL RW Sbjct: 329 --------ENIEHKTTMEHELRMALSKEELILFYQPQVNLE-GKIVGVEALLRWNHPQKG 379 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINLESPVLTSEKI 372 + P++FIPLA++TGL P+ ++ + + +W + P H+SIN+ + Sbjct: 380 LIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEASF 439 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 + + + I + I LELTE D + I R G LDDFGTGYSSL Sbjct: 440 YETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSL 499 Query: 432 SYLQDLDVDILKIDKSFVDALEYKN----VTPHIIEMAKTLKLKMVAEGIETSKQEEWLR 487 SYL+ L +D LKID+SFV + + N + IIEMA L ++AEG+E +Q +L Sbjct: 500 SYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLM 559 Query: 488 QHGVHYGQGWLYSKALPKEDFLRWA 512 ++G QG+L+ K +P E+ R Sbjct: 560 ENGCGLFQGYLFGKPMPPEELERLF 584 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 87/447 (19%), Positives = 170/447 (38%), Gaps = 25/447 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 +R + ++ + D ++ S+ Sbjct: 404 RDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYG 463 Query: 137 DLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITS--SDEIAQG 194 + + + D + I+ N + + +++I Sbjct: 464 HSAGDEVLKLTARR----LRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYS 519 Query: 195 IITRLQKTPGEHIENNGIIYDILPL-PEMNISIITWASTKMLQKGWHRQV-FIWLPLGLV 252 + E + P E ++ A M + + + Sbjct: 520 LSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDM- 578 Query: 253 IGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTD 312 R + + L+ A+ + +H+QP V A+ ++GAEAL RW + Sbjct: 579 ---------ARRSLALLTMESDLRHALARDEFELHFQPKVR-ADLTLIGAEALIRWRHPE 628 Query: 313 GSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQH-ISINLESPVLTSEK 371 ++P FIPLA+++GL P+ +R + + W + +S+N+ + Sbjct: 629 KGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQT 688 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + + +R ++ + P + LE+TE D + + + ++ G + +DDFGTGYSS Sbjct: 689 LVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSS 748 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ +D LKID++FV + + + II +A+ L +VAEG+E +Q E+L Sbjct: 749 LNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFL 808 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWAE 513 QG+LYS+ LP +F + Sbjct: 809 GSRDCQNFQGFLYSRPLPPAEFTTFLR 835 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 170/442 (38%), Gaps = 25/442 (5%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYM 144 ++ ++ H D + I D +++ + R + Sbjct: 465 MANHDVLTGLPNRALLQDRLSQAILHAQRYDRWVSVVFIDLDNFKLINDTLGHNAGDRLL 524 Query: 145 VAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH---NVVITSSDEIAQGIITRLQK 201 + M+ S D I ++ + +++ + ++ I LQ Sbjct: 525 KTVAER----MVGCISSTDTIVRLGGDEFVLVLSDQPKNVDLIAETLQKLRTAIAEPLQL 580 Query: 202 TPGEHIENNGIIYDILPLPEM-NISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAM 259 I P S++ A M K R F + Sbjct: 581 GDHCVRATASIGIATYPKDGKAPESLVANADAAMYRAKAVGRDNFQFYAPEFNT------ 634 Query: 260 FVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPD 319 L+ A+ + YQP + L + +IV EAL RW ++P Sbjct: 635 ----RAHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPV 690 Query: 320 SFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRD 378 FIP A++TGL P+ ++ W +S+N+ + + + + + + Sbjct: 691 GFIPTAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVH 750 Query: 379 MINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDL 437 ++ + + LELTE D + +++ + G +I +DDFGTGYSSLS L+ Sbjct: 751 ALSESDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTF 810 Query: 438 DVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHY 493 + LKIDKSF+D + + + V +I + + LK++++AEG+ET +Q +LR++ Sbjct: 811 PIARLKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDE 870 Query: 494 GQGWLYSKALPKEDFLRWAEQH 515 QG+ +SK + + R E Sbjct: 871 MQGYHFSKPVCSREIERLLESR 892 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 94/452 (20%), Positives = 175/452 (38%), Gaps = 32/452 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ +++ + ++ + + I D ++ + Sbjct: 591 EERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLNDTLGHD 650 Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAH-------NVVITSSDEI 191 + + +++ D + ++GN H N + I Sbjct: 651 KGDLLLQQVARRLADSVLES----DTVARVGGDEFVVVLGNLHKNRQEAANQTEAVGERI 706 Query: 192 AQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPL 249 + + E+ + I + + +I ++ A M + K R + Sbjct: 707 LAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSKERGRNAVRFFDP 766 Query: 250 GLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWP 309 + ++ + + L++AIE+ +HYQ V + ++ GAEAL RW Sbjct: 767 DMQTVVV----------QRAALEAGLRNAIEDNQFLLHYQAQV-VGT-RVTGAEALVRWQ 814 Query: 310 QTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH--PQQHISINLESPVL 367 + P FIPLA++TGL L ++ + + W + I++N+ Sbjct: 815 HPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQF 874 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGT 426 + +I P ++ LELTE D + +S + G LDDFG Sbjct: 875 RKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGI 934 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYL+ L +D LKID+SFV + + I+ +A++L L ++AEG+ET Q Sbjct: 935 GYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQ 994 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ++L G + QG+ + + LP EDF Sbjct: 995 RDFLAAAGCYAYQGYYFCRPLPIEDFEALLNN 1026 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 98/399 (24%), Positives = 176/399 (44%), Gaps = 23/399 (5%) Query: 124 SKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV 183 + D ++ + + + V + Q A N Sbjct: 163 NLDRFKFINDLIGYEYGNELLKQVAE-----RLRRYENGIVARQARDQFFLAFYTIDRNE 217 Query: 184 VITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKM-LQKGWHR 241 + ++ Q T Q T E I + P + + ++++A + + K Sbjct: 218 IRDMIRDVIQIFSTPFQLTDQELTITPSIGVSVFPDDATDWTTLLSFADLALEIAKENGG 277 Query: 242 QVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVG 301 + + L + H ++ A++ + +HYQPIV + G IV Sbjct: 278 NTYCFYTNEL----------KKTNEEKLYIQHSIRKALKQNEFTLHYQPIVDIQTGDIVA 327 Query: 302 AEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISI 360 EAL RW W+SP +FIP+A++T L +P+ ++R+V E W + P I + Sbjct: 328 VEALLRWFHPKRGWISPATFIPIAEETNLIQPIGDWVLRNVCEQSKKWKEKGLPHVQIGV 387 Query: 361 NLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEI 419 N+ + + + ++ Y ++P + LE+TE + + G ++ Sbjct: 388 NVSIKQFLQADLVKHIEHVLRTYDLDPFCLKLEITESMAMHHIDYVLAQLQSLKHLGLQL 447 Query: 420 YLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAE 475 +DDFGTGYSSL+YL+ L VDI+KID+SFV + ++ +I++A +L++K+VAE Sbjct: 448 AVDDFGTGYSSLNYLKKLPVDIIKIDRSFVQDMVKHSYDLSIVRAVIQVAHSLQMKVVAE 507 Query: 476 GIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 G+ET +Q L++ G QG+ +SK L E F + +Q Sbjct: 508 GVETEEQLAILKREGCDRAQGYYFSKPLAAEQFEQLVQQ 546 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 103/453 (22%), Positives = 178/453 (39%), Gaps = 36/453 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 ++ R + + +L ++ + D ++ + Sbjct: 381 EQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDTLGHD 440 Query: 139 GII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R + V + F+ V+P N + ++ Sbjct: 441 AGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGL----------NGPDASSQVAER 490 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLP 248 I + + E I P N +++ A M K + + Sbjct: 491 ILKTFAPPFMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFT 550 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 + + ++ A+E + +++QPIV A+G +V AEAL RW Sbjct: 551 PEM----------SEVSHERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRW 600 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVL 367 + PD FIPLA++TGL P+ +++ + W + I++N+ Sbjct: 601 NNPAMGMVMPDRFIPLAEETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQF 660 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFADPK-TSAPIISRYREAGHEIYLDDFGT 426 + +N + P + LE+TER D +A I+ + + G + +DDFGT Sbjct: 661 RDPGFTDAIMRALNDSNLRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGT 720 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYS+LSYL+ D LKIDKSFV + E ++ II MA +L LK+VAEG+E Sbjct: 721 GYSALSYLKSYPFDTLKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDL 780 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 +L+ Y QG+ YS+ LP++DF+ W E + Sbjct: 781 THFLKAEHCDYSQGYFYSRPLPEQDFIHWLETN 813 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 105/445 (23%), Positives = 183/445 (41%), Gaps = 35/445 (7%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND------- 137 ++Y + ++ D + D ++ S Sbjct: 498 LAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHFKDVNDSLGHGAGDVLL 557 Query: 138 -LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 + R + + + F+ ++ N + V + + +I + Sbjct: 558 QIVAERLQGCVRADDTLARMGGDEFVLLLN----------GVNGADDVASIAGKIIHELS 607 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIG 254 ++ E + + P + ++ +A + Q K R + + L Sbjct: 608 QPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRATYRFYTQALHDQ 667 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 + L+ A+E + ++YQP V L +G+I+G EAL RW Sbjct: 668 SVE----------RVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMG 717 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVL-TSEKIP 373 +SP FIP+A+Q+GL + +++ W Q +S N+ + S ++ Sbjct: 718 QVSPARFIPIAEQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGELM 777 Query: 374 QLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 Q LRD + V+P ++ +ELTE DP+ I+ R G ++ LDDFGTGYSSLSY Sbjct: 778 QSLRDALAESGVDPTRMEVELTESLLLDPQGMGEILHEIRALGIQLALDDFGTGYSSLSY 837 Query: 434 LQDLDVDILKIDKSFV----DALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L+ + ILKID+SFV + + + II MA L++ ++AEGIET+ Q + L Sbjct: 838 LRRFPISILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQ 897 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQ 514 G GQG+ YS +P +F +Q Sbjct: 898 GCEVGQGYHYSCPVPATEFSLLLQQ 922 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 96/486 (19%), Positives = 181/486 (37%), Gaps = 38/486 (7%) Query: 49 AIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSL 108 + + V + D L + + + + +++ + V S+ Sbjct: 228 MMTVSVVLDRAGDIDFYLANFVDVSHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSI 287 Query: 109 EHESPPDTFPEPGKISKDGYRVWLTSHNDLG--------IIRYMVAMGTAHYVVMIDPAS 160 + D ++ + R ++ V + Sbjct: 288 LIAKRMSEQLAVVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDE 347 Query: 161 FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-L 219 F+ ++ + +V +++I + Q I + P Sbjct: 348 FVMILRGH----------DMPSVASAVAEKIRLHLNQPFQIGQHTLRTATSIGIALYPGN 397 Query: 220 PEMNISIITWASTKML-QKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDA 278 E ++ A T M K F + + + + L A Sbjct: 398 GERMDDLMKHADTAMYFTKSEGGNGFCFFSSDMNLH----------AHEKLELENLLHGA 447 Query: 279 IENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLI 338 +EN+ ++YQP +SL +++GAE L RW + ++SP FIPLA+ T + + Sbjct: 448 LENQQFELYYQPQLSLPEQQVIGAEVLLRWHHPEKGFISPAVFIPLAEATNQIGAIGEWV 507 Query: 339 IRSVFEDMGDWLRQHPQQ-HISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTER 397 + + WLR I +N+ + + L++ ++ + ++ LE+TE Sbjct: 508 LENACRQASQWLRDGLPLPRIGVNVSGRQFQDKNLFTLVKRVLAETGLPADRLELEITET 567 Query: 398 EF-ADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYK- 455 A P +A ++ RE G + LDDFG GYSSL L+DL +D LKID +FV + + Sbjct: 568 AVTASPDEAARLLQSLRECGIMVALDDFGQGYSSLGQLRDLPIDRLKIDAAFVRDITDEP 627 Query: 456 -----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + I + L ++AEG+ET Q +L HG QG+ ++K +P+E F Sbjct: 628 GHPGGAIAAATIGLGHNLGFSVIAEGVETQAQLSFLMAHGCDEVQGYYFAKPMPREQFEA 687 Query: 511 WAEQHL 516 + + Sbjct: 688 FLRARM 693 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 92/460 (20%), Positives = 173/460 (37%), Gaps = 40/460 (8%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + E+ R+++ +L + + I D ++ +H Sbjct: 375 RNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHG 434 Query: 137 DLGII--------RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R + + F+ ++ GN + Sbjct: 435 HEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDIDGA------GNGTIQAELIA 488 Query: 189 DEIAQGIITRL--QKTPGEHIEN----NGIIYDILPLP-EMNISIITWASTKMLQ-KGWH 240 I + + P + + I + ++ A T M Q K Sbjct: 489 GHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADTAMYQAKAAG 548 Query: 241 RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV 300 R + + + + L+ AI+ + + +Q + +G+ Sbjct: 549 RNTLRFFDPEMQAAV----------THRAALETELRKAIDEQQFHLCFQVQMD-QSGRPT 597 Query: 301 GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH--PQQHI 358 G EAL RW + P SFIPLA++TGL P+ ++ + + W +Q + Sbjct: 598 GGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTL 657 Query: 359 SINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGH 417 ++N+ + + LRD++ ++ LELTE D + ++ ++ G Sbjct: 658 AVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGI 717 Query: 418 EIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMV 473 LDDFGTGYSSL+YL+ L ++ LKID+SFV + + I+ + L L+++ Sbjct: 718 RFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVI 777 Query: 474 AEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAE 513 AEG+ET Q +L G QG+L+ + LP +F ++ + Sbjct: 778 AEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQ 817 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 104/485 (21%), Positives = 184/485 (37%), Gaps = 42/485 (8%) Query: 44 YSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVP 103 ++ V RA V+ ++ +R + +R ++ + Sbjct: 590 LANAVRDRAGHVSHWVCTSIDITDR-------KESERRIRFLAEHDVLTELPNRALCIER 642 Query: 104 QCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND--------LGIIRYMVAMGTAHYVVM 155 +L+ I D ++ S R + + V Sbjct: 643 LRLALQQARRTGQKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSR 702 Query: 156 IDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYD 215 + F+ V+ + + V + + E + + Sbjct: 703 LGGDEFVVVLNG---------LADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGIS 753 Query: 216 ILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHH 273 + P +I ++ A M Q K R + + + + + Sbjct: 754 VFPDDAQDIDELMRQADVAMYQAKAQGRNGAQFFTAEMN----------QRAQARLMVEN 803 Query: 274 RLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEP 333 L+ A+ + +HYQP + +A+G++ G E L RW + + PD FIP+A++TGL Sbjct: 804 HLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIE 863 Query: 334 LTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL 392 + +I + + W Q + +SINL + L + +LR + + V P Q+ L Sbjct: 864 IGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLLDVLRASLERHAVPPGQLEL 923 Query: 393 ELTEREFAD-PKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDA 451 ELTE D + RE G + +DDFGTGYSSL+YL +D LKID+SFV Sbjct: 924 ELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRD 983 Query: 452 LEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKED 507 + + II + TL LK+VAEG+E + + LR G QG+ +++ + + Sbjct: 984 MLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQGYHFARPMAADT 1043 Query: 508 FLRWA 512 W Sbjct: 1044 ATAWL 1048 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 99/415 (23%), Positives = 172/415 (41%), Gaps = 33/415 (7%) Query: 113 PPDTFPEPGKISKDGYRVWLTSHND--------LGIIRYMVAMGTAHYVVMIDPASFIDV 164 + I D ++ + R + T+ V F+ + Sbjct: 701 RNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVM 760 Query: 165 IPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI 224 + A + ++++ + + +H I + + Sbjct: 761 LEGLDADTALAALQAEQ-----VAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTV 815 Query: 225 S-IITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENR 282 ++ A M Q K R + + + A L+ I Sbjct: 816 DELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTA----------RSQLESDLRQGIARH 865 Query: 283 DICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSV 342 ++ VH QPIV + ++ GAEAL RW +SP FIPLA++TGL PL ++++ Sbjct: 866 ELTVHLQPIVDGST-RLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTA 924 Query: 343 FEDMGDW--LRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA 400 E + W I++N+ + + + NP+++ LELTE Sbjct: 925 CEQLVRWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLL 984 Query: 401 -DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYK 455 D + + +++ + G LDDFGTGYSSLSYL+ L +D++KID+SFV + Sbjct: 985 GDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDA 1044 Query: 456 NVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 + I+ +AK+L L++VAEG+ET+ Q +L+ HG QG+L+ + +P E F R Sbjct: 1045 AIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFER 1099 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 106/450 (23%), Positives = 189/450 (42%), Gaps = 26/450 (5%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + +++ + + SL T + D ++ + Sbjct: 518 ETEARLDHLAHYDALTELPNRLLFRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDTLG 577 Query: 137 DLGIIRYMVAMGTA-HYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNV--VITSSDEIAQ 193 + + + +VV + D + S I+ + +V V+ ++I Sbjct: 578 HGVGDILLAEIASRLRHVVRMG-----DTVGRISGDEFCLILEDIQDVTDVVPIVEKILS 632 Query: 194 GIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKML-QKGWHRQVFIWLPLGL 251 +Q + I I P + +++++ + M K R + + + Sbjct: 633 VFSQTIQINSHMLQISASIGVAISPDNSNDADALLSFSDSAMYEAKEAGRNTYKFYTAEM 692 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 L FV L+DA+E V YQP + + + +VG EAL RW Sbjct: 693 TQQALEHSFVQ----------SALRDALEQSQFFVTYQPQLRIKDYSMVGVEALVRWQHP 742 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQ-HISINLESPVLTSE 370 + + PDSFIP+A+ +GL L I+R+ E WL + I +N+ + L E Sbjct: 743 ERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNFGRIYVNVSATQLHDE 802 Query: 371 KIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYS 429 + + + ++ LE+TE DP+ + ++S ++E G E+ +DDFGTGYS Sbjct: 803 SFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKEIGIELAIDDFGTGYS 862 Query: 430 SLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQEEW 485 SLSYL+ L +D LKID+SF+ + + +I M K L L+++AEG+E+ Q ++ Sbjct: 863 SLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNLEVIAEGVESQIQADF 922 Query: 486 LRQHGVHYGQGWLYSKALPKEDFLRWAEQH 515 L QG+LY+ L + F W +Q Sbjct: 923 LLDKECTEVQGYLYAHPLTADAFSEWEKQR 952 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 83/446 (18%), Positives = 172/446 (38%), Gaps = 26/446 (5%) Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 EAH+ M + + ++ + + D ++ + Sbjct: 618 EAHIRHMAEHDFLTDL---PNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTL 674 Query: 136 NDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG--NAHNVVITSSDEIAQ 193 + + + D + + I+ + + + Sbjct: 675 GHAHGDELLKQVAQR----LQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLD 730 Query: 194 GIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLGL 251 + Q + I + P + ++ A M K R + + L Sbjct: 731 DLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPEL 790 Query: 252 VIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQT 311 + + + L+ A+E + + + YQP ++ N ++VG EAL RW Sbjct: 791 NAQVAE----------RLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHP 840 Query: 312 DGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEK 371 + +SP FIPLA++TGL + ++ WL +++N+ + L Sbjct: 841 EQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPD 900 Query: 372 IPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSS 430 + + + +++ + LE+TE D + + + ++E G + +DDFGTGYSS Sbjct: 901 LLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSS 960 Query: 431 LSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWL 486 L+YL+ D++KID++FV L + + I+++A+ L ++ +AEG+E+ +Q ++L Sbjct: 961 LTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFL 1020 Query: 487 RQHGVHYGQGWLYSKALPKEDFLRWA 512 Q G QG+L + + Sbjct: 1021 AQAGCDVVQGYLTGRPQSAGELTAQL 1046 >UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=8 Tax=Ralstonia RepID=B2UIB3_RALPJ Length = 916 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 101/454 (22%), Positives = 173/454 (38%), Gaps = 36/454 (7%) Query: 79 LMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDL 138 +R ++ S++E + D ++ + Sbjct: 471 EQRLRHLAAHDALTGLTNRSFFIAHLESAIESARDESRELALFFLDLDRFKSVNDTAGHA 530 Query: 139 --------GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDE 190 R +G + + F+ +I A++ ++ Sbjct: 531 CGDTLLQSAAARLTDCIGPGDVIARLGGDEFVILIDQRVEGKRIALL----------AER 580 Query: 191 IAQGIITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKML-QKGWHRQVFIWLP 248 + Q + G + I + P ++ A M K R + Sbjct: 581 LLQAMREPFDTVNGRYYLGVSIGVALYPHDGISGSDLLRSADAAMYRAKQNGRNRAQFYT 640 Query: 249 LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARW 308 L L+R + L+DA EN ++ + YQP LA+ +IVGAEAL RW Sbjct: 641 AELNA----------RLQRRYMLENALRDARENNELQLVYQPKYDLASHRIVGAEALLRW 690 Query: 309 PQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ-HPQQHISINLESPVL 367 +SP FIP+A++TGL P+ ++R E W +++NL + Sbjct: 691 NSAKLGAISPVEFIPVAEETGLIVPIGAWVLRRACEQAVIWYEALGYDFRMAVNLSARQF 750 Query: 368 TSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGT 426 + + ++ + + P + +E+TE P+ G I +DDFGT Sbjct: 751 QAGDVVPMIEQTLADSGLPPTALEVEITESLLMGGADEVRPMFDALTAQGIRISIDDFGT 810 Query: 427 GYSSLSYLQDLDVDILKIDKSFVDALEYK----NVTPHIIEMAKTLKLKMVAEGIETSKQ 482 GYSSLSYLQ + +KID+SF+ + + +T I+ MA+ L + + AEG+E + Q Sbjct: 811 GYSSLSYLQRFPISNVKIDRSFITGIPHDPDSVALTEAIVAMARALGMTVTAEGVEDADQ 870 Query: 483 EEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL 516 E+L + G QG+ K + E F R HL Sbjct: 871 VEFLAKAGCQEIQGYYIGKPVTAEGFDRLLRAHL 904 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 101/451 (22%), Positives = 184/451 (40%), Gaps = 33/451 (7%) Query: 77 AHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHN 136 + + +++ Q ++ I D ++ + Sbjct: 422 ENEARINNLAFFDPLTQLPNRRLLQDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRG 481 Query: 137 D--------LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSS 188 R ++ V + F+ ++ S D A V + Sbjct: 482 HHVGDLLLIAVADRLRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQA-----AQQVQQIA 536 Query: 189 DEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIW 246 ++I Q + E+ + I + + +I ++ A M K R + Sbjct: 537 EKILQSLNQVYVLDEQEYFNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRNTLRF 596 Query: 247 LPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALA 306 + + + + +++A+ ++YQP V G+I GAEAL Sbjct: 597 FDPHMQAS----------AAQRFALQNEIREALLFNQFKLYYQPQVD-RTGRITGAEALI 645 Query: 307 RWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINLES 364 RW + +SP FIP+A+++GL PL I+ + + + W + +SIN+ + Sbjct: 646 RWLHPERGMISPMDFIPIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSA 705 Query: 365 PVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDD 423 + + NP Q+ LELTE A + + + + G + LDD Sbjct: 706 RQFQQPDFVTQVLAAVTRTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDD 765 Query: 424 FGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIET 479 FGTGYSSLSYL+ L ++ LKIDKSFV+ + + +I +A++++L ++AEG+ET Sbjct: 766 FGTGYSSLSYLKRLPINELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVET 825 Query: 480 SKQEEWLRQHGVHYGQGWLYSKALPKEDFLR 510 +Q +WL Q G + QG+ + K + E+FLR Sbjct: 826 QRQRDWLEQEGCLHYQGYYFGKPVGAEEFLR 856 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 106/466 (22%), Positives = 193/466 (41%), Gaps = 37/466 (7%) Query: 57 TQGKDALQELERWQGAACSEAHLMEM-RRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPD 115 Q ++ L+E ++ + L + R + R + + + S L + Sbjct: 513 QQAEERLEEKKQLLDHMSNHDSLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFIDL--- 569 Query: 116 TFPEPGKISKDGYRVWLTSHNDLGIIRYMVA-MGTAHYVVMIDPASFIDVIPYSSWQIDA 174 + K D L + + R M + + + + + F+ ++ SS A Sbjct: 570 ---DRFKKINDSLGHELGDKLLISVARRMQSHLRRSDTLARLGGDEFVVILEESSHSHFA 626 Query: 175 AIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP-LPEMNISIITWASTK 233 A+I + + I P E + +++ A Sbjct: 627 AVIARN----------LLNELSEAFDVESHRLFVTASIGISRYPYDAEDVVGLMSSADAA 676 Query: 234 MLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIV 292 M K R F + + + +L+DA+ V+YQP Sbjct: 677 MYHAKSRGRNNFQFYAPEMNG----------RAQDFLEMETQLRDALALEQFEVYYQPQY 726 Query: 293 SLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQ 352 + + +VGAEAL RW + + P FI LA++TG P+ ++ V W+ + Sbjct: 727 DMRDQTLVGAEALLRWNHPERGMVPPGDFIALAEETGAIVPIGEWVLMQVCRQNRQWMDE 786 Query: 353 HP-QQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIIS 410 +++N+ S + Q L ++ + + LE+TE D + + +++ Sbjct: 787 GLTPVRVAVNISIAQFRS-NLSQTLEQVLEQSGMPAELLELEITESMLMEDEEETITLLN 845 Query: 411 RYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAK 466 +E G I +DDFGTGYSSLSYL+ L VD LKID+SF+ + +T II + + Sbjct: 846 ELKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDRSFIAHVVHNQSDAAITGSIIALGQ 905 Query: 467 TLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + L+++AEG+E +Q ++L QH + QG+LY++ + EDF+R Sbjct: 906 NMDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYARPMTAEDFVRLL 951 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 93/418 (22%), Positives = 169/418 (40%), Gaps = 28/418 (6%) Query: 113 PPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQI 172 + +V L + +G ++ + Sbjct: 559 RDRFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETDT 618 Query: 173 DAAIIGNAHNVVIT----------SSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEM 222 + + G+ + +T ++ +I + + E I I P Sbjct: 619 VSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGE 678 Query: 223 NI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIE 280 + +++ A T M Q K R + + + + L A+E Sbjct: 679 DFDTLLKNADTAMYQAKRAGRNTWRFYTEQMNANAVE----------QLQLRTALHSALE 728 Query: 281 NRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIR 340 N + +HYQP ++LA+G +VG EAL RW + PD FIP A+++GL P+ ++R Sbjct: 729 NDEFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLR 788 Query: 341 SVFEDMGDWLRQH-PQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQ-IALELTERE 398 W RQ P+ I++NL + + + + ++ ++P + Sbjct: 789 EACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLL 848 Query: 399 FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDAL----EY 454 D ++ + R + G + +DDFGTGYSSL+YL+ VD LKID+SFV + + Sbjct: 849 LVDTESVIETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDD 908 Query: 455 KNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWA 512 + I+ MA TLKL+++AEG+E+ + +L QG+ Y++ +P + W Sbjct: 909 AAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALAEWL 966 >UniRef50_A0L613 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L613_MAGSM Length = 577 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 102/446 (22%), Positives = 185/446 (41%), Gaps = 26/446 (5%) Query: 76 EAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSH 135 + R+ + R Q ++ + ++ + I + Sbjct: 145 DDLTGLPSRILFEDRLQQAISLAVRHKNCVGAMFLGLDTERIK---LIRNSLGQTATDEL 201 Query: 136 NDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGI 195 +R + T V I SF ++ + DA + ++ + + Sbjct: 202 IREVAVRLDDCLRTTDSVARIAEDSFALLLTDLNGHKDAV------RNSSVVARKVYESL 255 Query: 196 ITRLQKTPGEHIENNGIIYDILPLPE-MNISIITWASTKM-LQKGWHRQVFIWLPLGLVI 253 + + N + + P ++ A T + + + + + Sbjct: 256 VKPVILNGQPVEVNAAMGITLFPQDGSTPRELLMNAETALNHARHRGWNNYQFFSSEMT- 314 Query: 254 GLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDG 313 R L+ AIE ++ ++YQP V L +G I+GAEAL RW + Sbjct: 315 ---------EAARERFELETHLRQAIEKNELVLYYQPQVDLHDGTIIGAEALIRWKHPER 365 Query: 314 SWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH-PQQHISINLESPVLTSEKI 372 +SP FIP+A++TGL P+ ++R+ + W + INL + + + Sbjct: 366 GLISPAQFIPVAEETGLIVPIGEWVMRTAIRQIAIWKELGVTPVRVGINLSALQFKRQNL 425 Query: 373 PQLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSL 431 L+ +++N + ++P + LE+TE D + ++ R G ++ +DDFGTGYSSL Sbjct: 426 AALVEELLNEHDIDPSLVDLEITESAIMDDVGRAIEMLKRISALGVKLSIDDFGTGYSSL 485 Query: 432 SYLQDLDVDILKIDKSFVDALE---YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 S L+ LKID+SFV LE K + II MA +L+ ++ EG+ETS Q +++ Sbjct: 486 SQLRQFPFQTLKIDRSFVTDLESSGDKAIVSAIIAMAHSLEQTVIVEGLETSAQLTIMKE 545 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQ 514 + QG+L+SK LP E+F + Sbjct: 546 LNCNEMQGFLFSKPLPAEEFTALLRE 571 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 106/439 (24%), Positives = 189/439 (43%), Gaps = 26/439 (5%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYM 144 +++ + + N + P+T I D ++ + + + Sbjct: 302 LAHHDSLTKLPNRVALNK----TFHKIIKPNTKIALLFIDLDHFKNVNDTLGHSIGDQLL 357 Query: 145 VAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPG 204 + + +++ ++ + + + +I + I + + R Sbjct: 358 LTVADR-MRTLVNNIGYVAR--QGGDEFIILLPADNEECLIEKTCAIKEALSARYNIDQH 414 Query: 205 EHIENNGIIYDILPLPEMNI-SIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLLAAMFVL 262 + I + P + ++ A M K R + + + Sbjct: 415 QFFITPSIGVSLYPRNGEDFDTLYQRADAAMYHAKHTGRNRYAFFTEEMQA--------- 465 Query: 263 RILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFI 322 I R + + L DAIE ++ +HYQP +SL GKI+GAEAL RW + +SP FI Sbjct: 466 -ISTRALTLGNALHDAIERQEFSLHYQPQISLITGKIIGAEALIRWHSLELGHVSPGEFI 524 Query: 323 PLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIPQLLRDMIN 381 PLA++ G + ++R + WL + I++NL +P ++ ++N Sbjct: 525 PLAEENGQILAIGEWVLRETARQLKQWLEEGITPVRIAVNLSYAQFQVNDLPSIVEAILN 584 Query: 382 HYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVD 440 Y V + + LELTER DP+ + I+ +++ G +DDFGTGYSSLSYLQ V Sbjct: 585 EYAVPAQYLELELTERIATKDPEHTITILESFQQLGIHTSIDDFGTGYSSLSYLQRFPVY 644 Query: 441 ILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQG 496 LKID+SFV + + + II +A+ L + +AEG+ET Q E L G QG Sbjct: 645 KLKIDQSFVRNMTTNTNDQVIVGTIILLAQQLGMTTIAEGVETKAQLEMLYNIGCDDIQG 704 Query: 497 WLYSKALPKEDF-LRWAEQ 514 + S+ +P E+F + + ++ Sbjct: 705 YYISRPIPAEEFKIGFLQK 723 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 94/451 (20%), Positives = 171/451 (37%), Gaps = 33/451 (7%) Query: 81 EMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHND--- 137 + ++++ L H + I D ++ + Sbjct: 297 HIEQLAFYDSLTGLPNRSLLRDRVQRVLAHSARHKNHGAILFIDLDNFKALNDTKGHNIG 356 Query: 138 -----LGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIA 192 R + + V + F+ V+ + A+ + + Sbjct: 357 DLLLIEVAKRLQDCVRNSDTVARMGGDEFVVVLEELNEDTQQAV-----AQAQDIGETVL 411 Query: 193 QGIITRLQKTPGEHIENNGIIYDILPLPEMNIS-IITWASTKMLQ-KGWHRQVFIWLPLG 250 + EH + I + E+ + + A T M Q K R + Sbjct: 412 ASLNRPFNLQGFEHYSSASIGISLFRDNEIGMDDVFKHADTAMYQAKTSGRNTLRFFDPD 471 Query: 251 LVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQ 310 + L L+ A+ + + +Q ++ A + +GAEAL RW Sbjct: 472 MQAS----------LEARAVLEIDLRHALSLQQFKLFFQIQMNAA-NQPIGAEALLRWLH 520 Query: 311 TDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINLESPVLT 368 +SP FI LA+ TGL P+ ++ + + W + +++N+ + Sbjct: 521 PKRGLVSPLDFISLAEDTGLILPIGQWVLETACTQIKAWEANPLACELQLAVNVSARQFH 580 Query: 369 SEKIPQLLRDMINHYQVNPRQIALELTEREFADP-KTSAPIISRYREAGHEIYLDDFGTG 427 + +R + +P ++ LELTE + + +S +E G +DDFGTG Sbjct: 581 QPDFVEQVRAALEKTGADPARLKLELTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTG 640 Query: 428 YSSLSYLQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQE 483 YSSLSYL L +D LKID SFV + + II M +L ++++AEG+ET Q Sbjct: 641 YSSLSYLTQLPLDQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQR 700 Query: 484 EWLRQHGVHYGQGWLYSKALPKEDFLRWAEQ 514 ++L ++G H QG+L+SK + +F + Sbjct: 701 DFLERNGCHAYQGYLFSKPVSIGEFEGLIRR 731 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 92/447 (20%), Positives = 173/447 (38%), Gaps = 37/447 (8%) Query: 85 VSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGII--- 141 ++ + +++ + + D +++ S Sbjct: 329 LADHDPLTGMANRALLDRKLTFAMQTADSTRSEVALAFLDLDNFKLVNDSLGHSVGDQLL 388 Query: 142 -----RYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGII 196 R + I F+ ++ + + I + + Sbjct: 389 KIVASRISELTSDQGSLARIGGDEFVIILEQMDLESC-----------LDRLSAIREAVT 437 Query: 197 TRLQKTPGEHIENNGIIYDILPLPEMNI-SIITWASTKML-QKGWHRQVFIWLPLGLVIG 254 + E I P ++ A M K R + Sbjct: 438 RPIVLNDIELRVTCSIGVASYPSHGSTAGELLASADMAMYRAKELGRDGIALFTSAMTA- 496 Query: 255 LLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGS 314 I+R+ S L+ A+ + +HYQP V + G+IV AEAL RW + Sbjct: 497 ---------IVRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEG 547 Query: 315 WLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP-QQHISINLESPVLTSEKIP 373 + P FI LA++T L P+ ++++ W Q IS+N+ + +++ Sbjct: 548 LVYPGDFIALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLI 607 Query: 374 QLLRDMINHYQVNPRQIALELTEREFA-DPKTSAPIISRYREAGHEIYLDDFGTGYSSLS 432 + + ++ ++P + LE+TE D S + G ++ +DDFGTGYSSLS Sbjct: 608 ETVATALSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLS 667 Query: 433 YLQDLDVDILKIDKSFVDAL----EYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQ 488 L+ + LKID+SF+ + + +T II +A+ L L+++AEG+ET +Q +L + Sbjct: 668 ALKRFPLSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVE 727 Query: 489 HGVHYGQGWLYSKALPKEDFLRWAEQH 515 G + QG+L+S+ + + F R E + Sbjct: 728 SGCNEIQGYLFSRPVEEAQFNRMLENN 754 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 25/385 (6%) Query: 139 GIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR 198 R + V + F+ ++ + + A I +++I + Sbjct: 673 VARRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAEL-----IAEKIRNELCRP 727 Query: 199 LQKTPGEHIENNGIIYDILP-LPEMNISIITWASTKMLQ-KGWHRQVFIWLPLGLVIGLL 256 Q EH ++ I + + ++ T M Q K R + + Sbjct: 728 YQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQ---- 783 Query: 257 AAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWL 316 IL + L+ A+E ++ +HYQ + ++G+ +GAEAL RW + Sbjct: 784 ------EILEKRGQLETALRGALERKEFLLHYQLQMD-SSGRPIGAEALLRWNNAKLGSV 836 Query: 317 SPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHP--QQHISINLESPVLTSEKIPQ 374 SP FIP+A+++GL P+ ++ + + W + I++N+ + Sbjct: 837 SPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFVA 896 Query: 375 LLRDMINHYQVNPRQIALELTER-EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSY 433 +R+++ + P + LELTE D S + + G + +DDFGTGYSSLSY Sbjct: 897 KVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSY 956 Query: 434 LQDLDVDILKIDKSFVDALE----YKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQH 489 L L +D LKID+SFV + + II MA +L ++++AEG+ET +Q E+L Sbjct: 957 LSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLR 1016 Query: 490 GVHYGQGWLYSKALPKEDFLRWAEQ 514 G QG+LY+K +P E+ Q Sbjct: 1017 GCQAYQGYLYAKPMPIEELEIKLAQ 1041 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.170 0.599 Lambda K H 0.267 0.0522 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,676,890,399 Number of Sequences: 3077464 Number of extensions: 233694355 Number of successful extensions: 570240 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 11909 Number of HSP's successfully gapped in prelim test: 3695 Number of HSP's that attempted gapping in prelim test: 513467 Number of HSP's gapped (non-prelim): 18429 length of query: 516 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 383 effective length of database: 631,093,644 effective search space: 241708865652 effective search space used: 241708865652 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 96 (41.2 bits)