Phyre 2 alignment of P69805 with c1yx5A_

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Job Description | P69805
Confidence | 12.63% | Date | Thu Jan 5 12:12:01 GMT 2012
Rank | 12 | Aligned Residues | 24
% Identity | 29% | Template | c1yx5A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:26s proteasome non-atpase regulatory subunit 4; | PDBTitle: solution structure of s5a uim-1/ubiquitin complex
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 72 | . | . | . | . | . | . | . | 80 |  | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | .
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Query Sequence |  | F | N | T | Q | P | F | V | A | A | . | P | I | L | G | V | T | L | A | L | E | E | Q | R | A | N
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Template Sequence |  | F | G | V | D | P | S | A | D | P | E | L | A | L | A | L | R | V | S | M | E | E | Q | R | Q | R
Template Known Secondary structure |  | T | T | T | T | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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