Phyre 2 alignment of P69805 with d1f1sa1

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Job Description | P69805
Confidence | 8.15% | Date | Thu Jan 5 12:12:01 GMT 2012
Rank | 36 | Aligned Residues | 38
% Identity | 21% | Template | d1f1sa1
SCOP info | alpha/alpha toroid | Chondroitin AC/alginate lyase | Hyaluronate lyase-like catalytic, N-terminal domain
Resolution | 2.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | E | R | M | Q | A | L | G | F | C | F | S | M | V | P | A | I | R | R | L | Y | P | E | N | N | E | A | R | K | Q | A | I | R | R | H | L | E | F | F | N | T | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | R | R | L | E | D | L | A | K | Q | I | T | . | N | P | H | . | S | T | I | Y | K | . | N | . | E | K | A | I | R | T | V | K | E | S | L | A | W | L | H | Q | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | . |  | T | T | . | S | T | T | T | T | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 320 | . | . | . | . | . | . | . | . | . | 330 | . |  | . | . | . |  | . | . | . | . | . |  | 340 |  | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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