BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (138 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P67702 Uncharacterized HTH-type transcriptional regulat... 281 5e-75 UniRef50_D0KFF0 Transcriptional regulator, XRE family n=10 Tax=B... 138 7e-32 UniRef50_A4W5K3 Helix-turn-helix domain protein n=4 Tax=Enteroba... 135 4e-31 UniRef50_A7ZQE8 Helix-turn-helix DNA-binding domain protein n=27... 132 5e-30 UniRef50_Q7MYT1 Similar to unknown protein n=1 Tax=Photorhabdus ... 121 8e-27 UniRef50_Q1NVE9 Helix-turn-helix motif n=6 Tax=Bacteria RepID=Q1... 119 3e-26 UniRef50_C7BKI9 Putative uncharacterized protein ygjM n=1 Tax=Ph... 119 4e-26 UniRef50_B4SZX2 Sea41 n=35 Tax=Enterobacteriaceae RepID=B4SZX2_S... 113 2e-24 UniRef50_Q6LGF7 Putative uncharacterized protein Z4435 n=2 Tax=V... 96 4e-19 UniRef50_Q3J707 Transcription regulator containing HTH domain-li... 90 2e-17 UniRef50_B6J222 Transcriptional regulator n=3 Tax=Coxiella burne... 87 1e-16 UniRef50_D2MJP6 Transcriptional regulator n=1 Tax=Candidatus Por... 83 3e-15 UniRef50_Q4KCW1 Putative uncharacterized protein n=1 Tax=Pseudom... 76 3e-13 UniRef50_A1RER9 Putative DNA-binding protein n=2 Tax=Shewanella ... 75 5e-13 UniRef50_B4WNC3 Putative uncharacterized protein n=1 Tax=Synecho... 72 5e-12 UniRef50_D0SQN2 Helix-turn-helix domain-containing protein n=6 T... 70 2e-11 UniRef50_A7BUG0 Transcriptional regulator n=2 Tax=Bacteria RepID... 69 4e-11 UniRef50_D2L5E8 Transcriptional regulator, XRE family n=1 Tax=De... 61 9e-09 UniRef50_Q5NXR7 Putative uncharacterized protein n=1 Tax=Aromato... 60 3e-08 UniRef50_C8U4T6 Predicted DNA-binding transcriptional regulator ... 58 8e-08 UniRef50_C6NZN3 Putative transcription regulator with HTH domain... 57 2e-07 UniRef50_A7BUA0 Transcriptional regulator protein n=1 Tax=Beggia... 56 4e-07 UniRef50_B0SBN1 Transcription regulator containing HTH domain n=... 55 5e-07 UniRef50_C7QXE5 Transcriptional regulator, XRE family n=5 Tax=Ch... 55 7e-07 UniRef50_C1DNZ8 Putative uncharacterized protein n=1 Tax=Azotoba... 54 1e-06 UniRef50_B1FYI7 Helix-turn-helix domain protein n=6 Tax=Burkhold... 53 3e-06 UniRef50_Q8YMS4 All4855 protein n=4 Tax=Bacteria RepID=Q8YMS4_ANASP 53 3e-06 UniRef50_Q6YRQ3 Slr6101 protein n=3 Tax=Chroococcales RepID=Q6YR... 53 4e-06 UniRef50_C4XM13 Xre family DNA-binding protein n=1 Tax=Desulfovi... 52 8e-06 UniRef50_C1DP02 Transcritional regulatior protein n=23 Tax=Prote... 51 1e-05 UniRef50_B2J1Y0 Transcription regulator containing HTH domain-li... 51 1e-05 UniRef50_D0YLK6 Transcriptional regulator, XRE family n=1 Tax=Kl... 49 5e-05 UniRef50_B0T536 Helix-turn-helix domain protein n=1 Tax=Caulobac... 47 1e-04 UniRef50_Q3SMY3 Transcriptional regulator, XRE family n=1 Tax=Ni... 47 2e-04 UniRef50_Q21CT0 Transcriptional regulator n=14 Tax=Proteobacteri... 47 2e-04 UniRef50_B7KKN6 Putative transcription regulator with HTH domain... 46 3e-04 UniRef50_B0C5K8 HTH transcriptional regulator n=4 Tax=Cyanobacte... 45 8e-04 UniRef50_B4WWD1 Putative uncharacterized protein n=1 Tax=Synecho... 44 0.001 UniRef50_A6W328 Putative uncharacterized protein n=1 Tax=Marinom... 44 0.002 UniRef50_A3JBK0 Plasmid-related protein n=2 Tax=Alteromonadales ... 43 0.003 UniRef50_C8TPW7 Probable transcriptional regulator n=3 Tax=root ... 42 0.005 UniRef50_B0SI61 Transcription regulator n=6 Tax=Bacteria RepID=B... 42 0.005 UniRef50_B4WWD2 Putative uncharacterized protein n=1 Tax=Synecho... 42 0.005 UniRef50_B3PVM1 Putative transcriptional regulator protein n=1 T... 42 0.007 UniRef50_Q01YH3 Putative uncharacterized protein n=1 Tax=Candida... 41 0.009 UniRef50_C1ZHD0 Predicted transcription regulator containing HTH... 41 0.015 UniRef50_Q2FMI1 Tetratricopeptide TPR_2 n=2 Tax=Methanospirillum... 39 0.054 UniRef50_A1W8N9 Helix-turn-helix domain protein n=1 Tax=Acidovor... 38 0.077 >UniRef50_P67702 Uncharacterized HTH-type transcriptional regulator ygjM n=57 Tax=Enterobacteriaceae RepID=YGJM_ECOL6 Length = 138 Score = 281 bits (719), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW Sbjct: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE Sbjct: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 Query: 121 HAKKLATRFGISPALFID 138 HAKKLATRFGISPALFID Sbjct: 121 HAKKLATRFGISPALFID 138 >UniRef50_D0KFF0 Transcriptional regulator, XRE family n=10 Tax=Bacteria RepID=D0KFF0_PECWW Length = 138 Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 95/135 (70%), Gaps = 1/135 (0%) Query: 5 ADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESA 64 AD ++A LT++ P L G + + Y AL+L ++LL ++P++PL+D++ AKI +EE A Sbjct: 4 ADAIKAANNLTSIVPLLGGSTSRKDYEDALKLTEYLLESEPDSPLIDMLTAKIDKYEEDA 63 Query: 65 PEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAK 123 PEF FN +A+P GIA++R LMDQ+GLT SD EIG KS+VSR+L+G+R LT++H Sbjct: 64 PEFVAFNERIKALPAGIALLRILMDQHGLTQSDFEAEIGKKSLVSRILNGERTLTVDHMS 123 Query: 124 KLATRFGISPALFID 138 LA RF I + F+D Sbjct: 124 ALAKRFDIPVSAFVD 138 >UniRef50_A4W5K3 Helix-turn-helix domain protein n=4 Tax=Enterobacteriaceae RepID=A4W5K3_ENT38 Length = 139 Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%) Query: 8 LQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEF 67 ++A ++L PFL G +E Y +AL LVD+L+ D ENPL+D + +KI +E ++ F Sbjct: 9 IEATKQLVDAVPFLGGSSSESDYREALALVDYLIEKDDENPLIDFLASKIADYENNSDRF 68 Query: 68 AEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLA 126 AEFN MP G+A++RTL+DQY L+ +DL EIGSKS+VS++LSG+R LT+ H K L+ Sbjct: 69 AEFNKSVAEMPVGVALLRTLIDQYKLSYADLKEEIGSKSLVSQILSGQRSLTITHIKALS 128 Query: 127 TRFGISPALFI 137 RFG+ P F+ Sbjct: 129 ARFGVRPEWFL 139 >UniRef50_A7ZQE8 Helix-turn-helix DNA-binding domain protein n=27 Tax=Enterobacteriaceae RepID=A7ZQE8_ECO24 Length = 139 Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 93/134 (69%), Gaps = 1/134 (0%) Query: 5 ADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESA 64 A ++A +L PFL G +E+ Y +ALELV++L+ D NPL+D + ++I +E + Sbjct: 6 ARAVKATRELVNAVPFLGGSDSEDDYREALELVEYLIEEDDTNPLIDFLASRIAEYENNN 65 Query: 65 PEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAK 123 +FAEF+ AMP G+A++RTL+DQ+ LT +DL EIGSKS+VS++LSG+R LT+ H K Sbjct: 66 EKFAEFDKAVAAMPVGVALLRTLIDQHNLTYADLKNEIGSKSLVSQILSGQRSLTISHIK 125 Query: 124 KLATRFGISPALFI 137 L+ RFG+ P F+ Sbjct: 126 ALSARFGVKPEWFL 139 >UniRef50_Q7MYT1 Similar to unknown protein n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7MYT1_PHOLL Length = 118 Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 56/112 (50%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 27 EEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRT 86 E+ Y AL +VD+L+ +D ENPL+D + AKI +E S FA FN MP G+A +R Sbjct: 7 EDAYNDALAMVDYLIEHDDENPLIDFLSAKIADYENSNERFAAFNKAVDDMPTGVAALRV 66 Query: 87 LMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 LMDQ+GL+ SDL EIGSKS++S++ SG R LT+ H K L+ RF + P LF+ Sbjct: 67 LMDQHGLSYSDLKEEIGSKSLISQIFSGTRSLTIAHIKALSERFNVRPDLFL 118 >UniRef50_Q1NVE9 Helix-turn-helix motif n=6 Tax=Bacteria RepID=Q1NVE9_9DELT Length = 153 Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/137 (42%), Positives = 90/137 (65%), Gaps = 1/137 (0%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITAW 60 + A I + L A F++ I N++ Y QAL L+D L+ + D + PL++++ I W Sbjct: 1 MGFAAIKERARDLFHEAGFISHIHNQDDYEQALALMDDLVQDYDNQRPLIEILAVAIKRW 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 E SA EFA+FN AV++ LM+Q+GL ++DLPEIGSKS+VS++L+G+R LT + Sbjct: 61 ENSAVEFADFNLQVDQQDSATAVLQVLMEQHGLGIADLPEIGSKSLVSKILNGERNLTRK 120 Query: 121 HAKKLATRFGISPALFI 137 H L+ RFG++PA+F+ Sbjct: 121 HIVALSQRFGLNPAIFL 137 >UniRef50_C7BKI9 Putative uncharacterized protein ygjM n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BKI9_PHOAA Length = 140 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 89/140 (63%), Gaps = 2/140 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENP-LLDLVCAKITA 59 MI + + L + P+L I EQ+ +AL+L+D L N N L++++ I Sbjct: 1 MINFVVVQERANALFSEIPWLTYINTSEQHKEALDLIDELFKNYENNKGLIEILATAIER 60 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLT 118 +E++APEFAEFN + +P G+A +R LMDQ+GL +DL EIG S+VS++LSG R LT Sbjct: 61 YEDTAPEFAEFNQAIENIPTGVAALRVLMDQHGLKQADLKNEIGGASLVSQILSGTRSLT 120 Query: 119 LEHAKKLATRFGISPALFID 138 + H K L+TRF +S A+FID Sbjct: 121 VTHIKALSTRFKVSSAIFID 140 >UniRef50_B4SZX2 Sea41 n=35 Tax=Enterobacteriaceae RepID=B4SZX2_SALNS Length = 142 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 82/122 (67%), Gaps = 2/122 (1%) Query: 19 PFLAGIQNEEQYTQALELVDHLLLNDP-ENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 P + +N+ +Y +AL LV+ L+ +D ENPL +L+CA+I+ +E+ APEF N + Sbjct: 21 PLMGEDRNDNEYRRALALVEFLVDHDDLENPLFELLCARISEYEKHAPEFKALNQHLEKT 80 Query: 78 PGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P G++V+RTLMDQYGL +DL E+GSKS VS +L+G+R LT+ H K L RF + F Sbjct: 81 PPGVSVLRTLMDQYGLKAADLANELGSKSNVSNILNGRRALTVNHIKALTQRFKLPADAF 140 Query: 137 ID 138 I+ Sbjct: 141 IE 142 >UniRef50_Q6LGF7 Putative uncharacterized protein Z4435 n=2 Tax=Vibrionaceae RepID=Q6LGF7_PHOPR Length = 141 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 80/131 (61%), Gaps = 2/131 (1%) Query: 9 QAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITAWEESAPEF 67 + ++ A P++ GI + +QY + +EL+D L+ + D L+DL+ I +E EF Sbjct: 11 EVSRQIEATMPWIHGITSRKQYDELIELMDSLVEDYDANQTLIDLMFPVIEQYESKGEEF 70 Query: 68 AEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLA 126 FNA ++ ++++R ++DQ GLT SDL EIG KS VS +LSG+R +TL+H + L+ Sbjct: 71 QAFNAHIDSINPAVSMLRLIIDQNGLTQSDLKAEIGGKSSVSMILSGQRSMTLQHIRALS 130 Query: 127 TRFGISPALFI 137 RF I +F+ Sbjct: 131 ARFNIPTYMFV 141 >UniRef50_Q3J707 Transcription regulator containing HTH domain-like n=2 Tax=Nitrosococcus oceani RepID=Q3J707_NITOC Length = 155 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 7/121 (5%) Query: 24 IQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+N+ Y + L+L++ L+ DP N L+ ++ + +E + +F+ A+ + Sbjct: 26 IRNKRDYQKTLDLIEELMTEAEDSRLDPLNDLIKILAGAVEEYESKQDKMVQFHKEAEGI 85 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 G++ +R LM+Q+ L S L EIGSKS+VS +LSG+R LT EH KL+ RFG+SPA+F Sbjct: 86 DPGVSALRLLMEQHALGASGLREEIGSKSLVSMILSGQRSLTKEHIAKLSGRFGVSPAVF 145 Query: 137 I 137 Sbjct: 146 F 146 >UniRef50_B6J222 Transcriptional regulator n=3 Tax=Coxiella burnetii RepID=B6J222_COXB2 Length = 170 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 43/95 (45%), Positives = 65/95 (68%), Gaps = 1/95 (1%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDPEN-PLLDLVCAKITAWEESAPEFAEFNAMAQA 76 A F+ IQN+++Y +AL L++ L+ + N PL++++ A I WE A EF EFN + Sbjct: 14 AHFIGHIQNKKEYEEALALMEELIEDYNYNKPLIEILAASIERWENEASEFREFNKHIRR 73 Query: 77 MPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVL 111 + G AV++ LM+QY L +SD PEIGSKS+VS++L Sbjct: 74 LQPGPAVLKVLMEQYHLGVSDFPEIGSKSLVSKIL 108 >UniRef50_D2MJP6 Transcriptional regulator n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJP6_9BACT Length = 135 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 18/122 (14%) Query: 24 IQNEEQYTQALELVDHLLL---NDPENPL---LDLVCAKITAWEESAPEFAEFNAMAQAM 77 IQNE+ Y +A+E ++ LL D +PL LD + + AWEE M Sbjct: 24 IQNEQDYDRAVERLNTLLDEVGTDDRHPLYSLLDTLGTVLHAWEEQH----------HVM 73 Query: 78 P--GGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 P GG ++R M+++ L+ SDLPEIGS+ +VS +LSGKR+L + L+ RFG+SP++ Sbjct: 74 PECGGAGLLRFFMEEHSLSQSDLPEIGSQGVVSEILSGKRELNVRQILALSKRFGVSPSV 133 Query: 136 FI 137 F+ Sbjct: 134 FV 135 >UniRef50_Q4KCW1 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCW1_PSEF5 Length = 212 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 4/122 (3%) Query: 20 FLAGIQNEEQYTQALELVDHLL----LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 F+ GI+ Y +A L+D L L+ E +L + +I A++ + +F E NA + Sbjct: 29 FVHGIKTPADYERATNLLDELTDGRELSKIEEKILVELEDEILAYQRHSEQFRESNAAFE 88 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 A + +I+ LM+ GLT SDLPEIG K+ VS+VLSG R ++ + A LA RF + P Sbjct: 89 ATCTPVQLIKDLMETLGLTGSDLPEIGDKTAVSKVLSGDRPISHKMAYALAERFSMEPRA 148 Query: 136 FI 137 F+ Sbjct: 149 FV 150 >UniRef50_A1RER9 Putative DNA-binding protein n=2 Tax=Shewanella RepID=A1RER9_SHESW Length = 138 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 2/136 (1%) Query: 4 IADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITAWEE 62 IA + + + L A PF+ + +++ Y AL LV+ L+ + D LLDL+ +I +EE Sbjct: 3 IARVKKLVDDLQAEMPFIRRLNSKQDYLAALNLVEALIDDLDANGLLLDLLVLRINEYEE 62 Query: 63 SAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEH 121 + EF +FN + G AV+R LMD +GL ++D EIG + VS ++ K L+L Sbjct: 63 QSDEFKDFNNAVKNTDKGTAVLRVLMDLHGLKVTDFQHEIGDATTVSLIIDEKMPLSLAQ 122 Query: 122 AKKLATRFGISPALFI 137 KLA RF I A FI Sbjct: 123 RHKLAVRFNIPCADFI 138 >UniRef50_B4WNC3 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNC3_9SYNE Length = 132 Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 21/145 (14%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALE----LVDHLLLND--PENPLLDLVC 54 M AIA ++ ++ + +AP L I+ E+ Y ++E LVD + ++ P LL+ + Sbjct: 1 MTAIASDIR--KQWSVIAPILT-IRTEQDYDHSIERLNSLVDEVGTDETHPLYTLLETLS 57 Query: 55 AKITAWEESAPEFAEFNAMAQAMPG--GIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLS 112 I ++EE+ A+P GI V+ LM+++ LT SDLPE+G K V+++L+ Sbjct: 58 LVIQSYEETH----------HAIPDSDGIEVLSYLMEEHALTESDLPELGEKVAVTKILA 107 Query: 113 GKRKLTLEHAKKLATRFGISPALFI 137 + +L L H + LA RF +SP++FI Sbjct: 108 RQEELELHHIRALANRFNVSPSVFI 132 >UniRef50_D0SQN2 Helix-turn-helix domain-containing protein n=6 Tax=Proteobacteria RepID=D0SQN2_ACIJU Length = 133 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 12/136 (8%) Query: 7 ILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEES 63 I QA + VAP L+ +NE+ + +E +D LL +D +PL+ L+ + Sbjct: 5 IKQAVDHWHYVAPLLSKPENEDDFHTLVEALDELLDTVGDDESHPLMGLI-------HQL 57 Query: 64 APEFAEFNAMAQAMP--GGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEH 121 +++ MP G A + LM+Q+GL SDL E+ ++S++S +LSGKR+L + H Sbjct: 58 GDLVSDYENEHLPMPKGDGRAALAFLMEQHGLGQSDLAEVATQSVISEILSGKRQLNIRH 117 Query: 122 AKKLATRFGISPALFI 137 K L+ RF +S F Sbjct: 118 IKALSERFNVSADTFF 133 >UniRef50_A7BUG0 Transcriptional regulator n=2 Tax=Bacteria RepID=A7BUG0_9GAMM Length = 132 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 15/129 (11%) Query: 15 TAVAPFLAGIQNEEQYTQALE----LVDHLLLND--PENPLLDLVCAKITAWEESAPEFA 68 A+ P + I NEE+Y A+E L+D + N+ P LLD++ I A+EE Sbjct: 13 VAIQPLFS-IDNEEEYDNAIERLNNLIDEVGTNEQHPLYGLLDMLGMVIHAYEEKHYPMP 71 Query: 69 EFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATR 128 E + GI ++ MD++ LT SDLPEIG V +L KR L L+ R Sbjct: 72 ECS--------GIGMLEFFMDEHKLTCSDLPEIGEPGSVLEILKDKRVLDANQISALSER 123 Query: 129 FGISPALFI 137 F ISPA+FI Sbjct: 124 FHISPAVFI 132 >UniRef50_D2L5E8 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5E8_9DELT Length = 140 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 14/120 (11%) Query: 24 IQNEEQYTQALELVDHLL---LNDPENPLLDLV---CAKITAWEESAPEFAEFNAMAQAM 77 I+++ Y + LV+ LL +D +PL D++ ++ A+EE+ A+ +A Sbjct: 29 IKSQADYDRIASLVNVLLDAIRDDATHPLSDVLHYLTIQMEAYEEA------HVAIPEAD 82 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 P AV+R LM+Q+GL SDL + +S +S +L+GKR ++ E AKKLA RF ++ LF+ Sbjct: 83 PK--AVLRFLMEQHGLNQSDLGDCAPQSHISAILAGKRGISKETAKKLAKRFHVNADLFL 140 >UniRef50_Q5NXR7 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NXR7_AZOSE Length = 135 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 14/142 (9%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCA 55 +++ D++++ ++ A +++E Y L V + P LL +V Sbjct: 1 MSVTDVIESWAAVSDALGLGAPVRDESHYEALLAFVAEAFERFGGNESHPVFGLLSIVAD 60 Query: 56 KITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKR 115 +I +EE A + MA +R LM + G+ SDLPE+GS+S+VS VLSGKR Sbjct: 61 RIREYEERA---HPWPPMAPH-----EFLRQLMAERGIRQSDLPEVGSQSVVSEVLSGKR 112 Query: 116 KLTLEHAKKLATRFGISPALFI 137 L L K L+ RF + F+ Sbjct: 113 SLNLRQVKALSERFHLPMEAFV 134 >UniRef50_C8U4T6 Predicted DNA-binding transcriptional regulator n=4 Tax=Proteobacteria RepID=C8U4T6_ECO10 Length = 119 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 14/117 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I+ E+ Y AL V+ + N+PE +++C I +E+ Sbjct: 3 IKPIRTEQDYEAALRAVEPMFDNEPEIDTPEGDFFEVMCLLIEEYEKKH--------YPI 54 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 P I IR M+Q GLT+ DL P IG K+ V VL+G R LTL ++L +FGI Sbjct: 55 EPPSPIEAIRFRMEQQGLTVKDLEPAIGKKNRVYEVLNGTRSLTLPMIRRLHNQFGI 111 >UniRef50_C6NZN3 Putative transcription regulator with HTH domain n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZN3_9PROT Length = 142 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPL---LDLVCAKITAWEESAPEFAEFNAMA 74 L I NE+ Y + L++ LL +D ++PL LDLV + +E+ E A+ Sbjct: 26 LRPIHNEKSYVRMTALMNSLLDVAGDDEDHPLSSLLDLVSDMVAKYEQ------ERYAIE 79 Query: 75 QAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 A P +R LM+ L L EI +S +S +L+GKRK++ A KL FG+SPA Sbjct: 80 PADPKD--ALRFLMESRDLKQDALSEIVPQSNLSAILAGKRKISAPLAGKLGKFFGVSPA 137 Query: 135 LFI 137 LFI Sbjct: 138 LFI 140 >UniRef50_A7BUA0 Transcriptional regulator protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUA0_9GAMM Length = 133 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 14/129 (10%) Query: 15 TAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPLLDL---VCAKITAWEESAPEFA 68 + +A L+ E++Y Q + ++D LL +D +PL DL + I +EE A Sbjct: 13 SPIADILSVPHCEKEYQQMVAVLDELLNTVGDDETHPLADLLETISTLIEVYEEKHHSVA 72 Query: 69 EFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATR 128 + A V+R LM+++GL +DL E+G++S +S +L+G +L + + + Sbjct: 73 DAPAYE--------VLRFLMEEHGLMPNDLSELGNQSEISAILNGHYQLNIFQIQYFSKL 124 Query: 129 FGISPALFI 137 F +SPA+F+ Sbjct: 125 FHVSPAVFL 133 >UniRef50_B0SBN1 Transcription regulator containing HTH domain n=3 Tax=Leptospira biflexa serovar Patoc RepID=B0SBN1_LEPBA Length = 133 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 14/127 (11%) Query: 17 VAPFLAGIQNEEQYTQALELVDHLLLNDPEN------PLLDLVCAKITAWEESAPEFAEF 70 V L+ ++QY + ++++D L+ N PLL+ V I +E F + Sbjct: 15 VKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNLIEEYEND--HFIQP 72 Query: 71 NAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 NA I V++ LM + LT DL +GS+ +VS +L+ KR+L + K LA +F Sbjct: 73 NAEP------IQVLKFLMQENSLTQKDLNILGSQGVVSEILNEKRELNVRQIKALAEKFN 126 Query: 131 ISPALFI 137 +SP++FI Sbjct: 127 VSPSVFI 133 >UniRef50_C7QXE5 Transcriptional regulator, XRE family n=5 Tax=Chroococcales RepID=C7QXE5_CYAP0 Length = 132 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 15/120 (12%) Query: 24 IQNEEQYTQALELVDHLLLN----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPG 79 I+NE +Y Q +++ L++N E +L L+ + I ++E Q P Sbjct: 22 IENEAEYQQYSDILIELMMNPNRSSEETEILKLIASLIKEFDEKQ---------EQPEPA 72 Query: 80 G-IAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +++ LM+++ + DL +IGSK +VS V++GKR ++ AK LA F +SPALF+ Sbjct: 73 SPHEILQHLMEEHNMRQVDLVDKIGSKGVVSEVVNGKRAISKSQAKTLAGIFHVSPALFL 132 >UniRef50_C1DNZ8 Putative uncharacterized protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DNZ8_AZOVD Length = 67 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 88 MDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 MDQY D EIG KSMVS VL G RKL+ +H L RF +SPA+F D Sbjct: 1 MDQYQSKTDDFKNEIGGKSMVSMVLGGTRKLSKDHIHALCDRFDLSPAVFFD 52 >UniRef50_B1FYI7 Helix-turn-helix domain protein n=6 Tax=Burkholderia RepID=B1FYI7_9BURK Length = 140 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 19/140 (13%) Query: 6 DILQAGEKLTAVAPFLAGIQNEEQYTQALEL----VDHLLLNDPEN-PLLDL---VCAKI 57 DI ++ L A P + I+NE+ Y +EL DHL N EN PL DL V + Sbjct: 12 DIARSWAALQAQLP-ITPIRNEQDYQTMVELSSALADHL--NGKENEPLTDLHAIVSDLV 68 Query: 58 TAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKL 117 +W+ A+ + +A P V+R L++ +GL DL I S ++VS +L+G+R + Sbjct: 69 RSWK------AQNVTLPKAEPR--EVLRHLLETHGLRQKDLMGIASPTVVSDILAGRRAI 120 Query: 118 TLEHAKKLATRFGISPALFI 137 + + AK LA RF + F+ Sbjct: 121 SKKVAKALAQRFQTDVSAFL 140 >UniRef50_Q8YMS4 All4855 protein n=4 Tax=Bacteria RepID=Q8YMS4_ANASP Length = 126 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 12/118 (10%) Query: 24 IQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 I+NE Y AL+ + L LN PE+ L+++ + A+E+ + A P Sbjct: 7 IRNEADYRAALDEIARLFDSELNTPESDRLEVLTTLVEAYEQKHYQIA--------APDP 58 Query: 81 IAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I I ++ GL+++DL P IGSK+ +S +L ++ LTLE ++L + GI + I Sbjct: 59 IEAILYYLESRGLSVNDLEPVIGSKTEISNILHRRQALTLEIIRRLHQQLGIPAEVLI 116 >UniRef50_Q6YRQ3 Slr6101 protein n=3 Tax=Chroococcales RepID=Q6YRQ3_SYNY3 Length = 139 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%) Query: 80 GIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 G +++ L+++Y L DL P ++S+VS VL GKR+LT H ++LAT F +SPA+F Sbjct: 70 GTELLQILIEEYELKQKDLVPIFKTESIVSEVLKGKRQLTTRHIQELATFFHVSPAVFF 128 >UniRef50_C4XM13 Xre family DNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XM13_DESMR Length = 391 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 12/112 (10%) Query: 24 IQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 I+ E Y AL ++D L+ +P ++ L+ + +EE E + + P Sbjct: 5 IKTEADYNDALAVIDSLMGAEPGTEDDERLEYWAKLVEVYEE------EHYPIPKPTP-- 56 Query: 81 IAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 + I+ MDQ GLT DL P +GSK +VS VL+GKR+L+L+ L GI Sbjct: 57 LEAIKFAMDQQGLTRRDLEPFMGSKGVVSEVLAGKRRLSLDMIHALHAGLGI 108 >UniRef50_C1DP02 Transcritional regulatior protein n=23 Tax=Proteobacteria RepID=C1DP02_AZOVD Length = 125 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 8/111 (7%) Query: 24 IQNEEQYTQALELVDHLLLNDPE--NPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGI 81 I+N++ Y AL+ + L N+PE P D +T E E +P + Sbjct: 6 IRNDQDYRAALKALSPLFDNEPEPGTPEGDRFEVMLTLVEAY-----EAKHFPVDLPNPV 60 Query: 82 AVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 I+ M+Q GLT SDL P IG + V VL+G R LTL KL + FGI Sbjct: 61 DAIKFRMEQLGLTASDLSPAIGRTNRVYEVLNGTRSLTLPMIWKLHSLFGI 111 >UniRef50_B2J1Y0 Transcription regulator containing HTH domain-like protein n=2 Tax=Cyanobacteria RepID=B2J1Y0_NOSP7 Length = 142 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 12/111 (10%) Query: 24 IQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 I+ EE+Y +AL V+ ++ L + E L +L+ I +EE +M ++ P Sbjct: 22 IKTEEEYNRALTAVEGMMSGELAEAETALFELLVLLIENYEE------HHYSMGKSKP-- 73 Query: 81 IAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 +A + +LM ++ + L+ L EI GS +V V++G+RK+T AK LA F Sbjct: 74 VATLESLMHEFDVELTSLVEIFGSVKIVKEVVNGQRKVTQSEAKSLAKFFN 124 >UniRef50_D0YLK6 Transcriptional regulator, XRE family n=1 Tax=Klebsiella variicola At-22 RepID=D0YLK6_KLEVA Length = 192 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I I+ MDQ GLT +D+ + +GS S VS VLSGKRKL+L ++L GI + Sbjct: 58 PTPIEAIKFRMDQMGLTYADMRQYLGSASKVSEVLSGKRKLSLSMIRRLHNGLGIPADIL 117 Query: 137 I 137 I Sbjct: 118 I 118 >UniRef50_B0T536 Helix-turn-helix domain protein n=1 Tax=Caulobacter sp. K31 RepID=B0T536_CAUSK Length = 124 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 20/117 (17%) Query: 24 IQNEEQYTQALELVDHLLLNDPEN--------PLLDLVCAKITAWEESAPEFAEFNAMAQ 75 I++E Y QAL + N+PE LL L+ AK +EE F Sbjct: 7 IRDEAAYAQALVEFEAFFDNEPEARSDAGDRFELLGLLLAK---YEEERFPFPR------ 57 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 G + IR M++ GL SDL E+ GS+S S +L+G R+LTL + L +GI Sbjct: 58 --TGPVEAIRFAMERQGLGQSDLAELLGSRSRASEILNGHRELTLPQIRLLTKSWGI 112 >UniRef50_Q3SMY3 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SMY3_NITWN Length = 124 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Query: 87 LMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 L++Q+GLT +DL P +G+ S VS V+SGKR+L++ K+L RF I L I Sbjct: 65 LVEQHGLTRADLVPLLGTASRVSEVMSGKRELSMTMVKRLRERFHIPADLLI 116 >UniRef50_Q21CT0 Transcriptional regulator n=14 Tax=Proteobacteria RepID=Q21CT0_RHOPB Length = 126 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 12/125 (9%) Query: 17 VAPFLAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAM 73 +A L I+ E Y AL V+ L P+ LD++ I A+E A + M Sbjct: 1 MATELKPIRTEADYQNALVEVEQLWGAKSGTPKGDRLDVLATLIDAYE------ARHDPM 54 Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 P I I+ M+Q GL+ DL P IG+++ V+ V++ +R L++E ++L GIS Sbjct: 55 DP--PDPIEAIQFRMEQQGLSRKDLEPLIGTRARVAEVMNRRRSLSIEMIRRLHEHLGIS 112 Query: 133 PALFI 137 + I Sbjct: 113 AEVLI 117 >UniRef50_B7KKN6 Putative transcription regulator with HTH domain n=2 Tax=Cyanothece RepID=B7KKN6_CYAP7 Length = 132 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 13/119 (10%) Query: 24 IQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPG 79 I EE +AL +V+ L+ EN L DL+ I +E+ EF + P Sbjct: 22 ITTEEDNEKALAIVEELMHRKNRSLEENELYDLLIVLIEKFEQ------EFYYTQNSNPY 75 Query: 80 GIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + + LM+Q G+T ++L ++ S + + ++ GKR++T E+A+ L F + P+LFI Sbjct: 76 SMLLF--LMEQQGITKTELGKVFESLEIAADLVEGKREITQEYAQILGRFFQVEPSLFI 132 >UniRef50_B0C5K8 HTH transcriptional regulator n=4 Tax=Cyanobacteria RepID=B0C5K8_ACAM1 Length = 132 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%) Query: 46 ENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IGSK 104 + LLDL+ I +E+SA + V+ LM+ G DL IGS+ Sbjct: 48 QEALLDLLVMLIEKYEDSAYPIL--------VSSPREVLLHLMEAKGCIQEDLVGVIGSR 99 Query: 105 SMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +VS V++GKR +++ AK LA FG+ LFI Sbjct: 100 GVVSEVVNGKRGISIAQAKSLADYFGVDAGLFI 132 >UniRef50_B4WWD1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WWD1_9SYNE Length = 149 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Query: 80 GIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 G+ +++ LM + GL DL I +KS+VS +LSG+R+LT ++ ++LA F I + F Sbjct: 84 GVELLKGLMKERGLRQKDLVHIFKTKSVVSEILSGQRELTPQYTRRLAEYFNIPDSAF 141 >UniRef50_A6W328 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W328_MARMS Length = 99 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPEN-PLLDLVCAKITA 59 M+ +I Q + + P L GI + +++ QAL L++ LL + EN +++ + IT Sbjct: 1 MLVTNEITQMAKAIVTQFPILNGISSIDEHQQALILLEDLLEHYDENLIIIEALSNVITR 60 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQ 90 +E+ A EF +FN A+ A + L+DQ Sbjct: 61 YEDGAAEFDDFNKRQTAINLTTATLTVLIDQ 91 >UniRef50_A3JBK0 Plasmid-related protein n=2 Tax=Alteromonadales RepID=A3JBK0_9ALTE Length = 396 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 77 MPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 +PG + I MDQ GL DL P IGS S V+ VL+G R L+L ++L GI + Sbjct: 57 VPGPLDAICFRMDQQGLKKKDLIPYIGSASKVTEVLNGTRNLSLNMIRRLTDGLGIPADV 116 Query: 136 FI 137 I Sbjct: 117 LI 118 >UniRef50_C8TPW7 Probable transcriptional regulator n=3 Tax=root RepID=C8TPW7_ECO26 Length = 218 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I I+ MDQ GL+ +D+ + IGS S VS VL+ KR L+L ++L GI + Sbjct: 60 PDPIEAIKFRMDQQGLSYADMKQYIGSASKVSEVLNRKRPLSLSMIRRLHDGLGIPADIL 119 Query: 137 I 137 I Sbjct: 120 I 120 >UniRef50_B0SI61 Transcription regulator n=6 Tax=Bacteria RepID=B0SI61_LEPBA Length = 134 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 12/118 (10%) Query: 24 IQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 I+N++ + +AL ++ L N E LD++ + A+E + P Sbjct: 6 IKNKKDHLEALSEIEKLWDARKNTTEYDRLDILITLVDAYETKHYPIDD--------PDP 57 Query: 81 IAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I ++++MD + DL IG +S + +LS KRKLTLE +K+ GI + + Sbjct: 58 IEALKSVMDDRNMKSVDLGNLIGGRSRATEILSRKRKLTLEMIRKINQNLGIPTDILV 115 >UniRef50_B4WWD2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WWD2_9SYNE Length = 114 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 76 AMPG--GIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 +MP G+ ++ L+++ L DL +I +++ S VL+G++ LT+++ +K+ RF IS Sbjct: 48 SMPDIYGVVALKALIEENDLRRRDLSDIFETRANCSEVLAGRQPLTIQNVQKICDRFHIS 107 Query: 133 PALFI 137 P +F Sbjct: 108 PLVFF 112 >UniRef50_B3PVM1 Putative transcriptional regulator protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PVM1_RHIE6 Length = 125 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 12/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+N++ Y AL L+ L PE LD++ + A+E + Sbjct: 4 LKPIRNDDDYEDALLLLKQLWGAKDGSPEADKLDILATLLDAYEAGRYPID--------L 55 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I I M+Q GLT DL P +GS+ V+ +L+ KR L+L+ ++L I + Sbjct: 56 PDPIDAIIFRMEQQGLTRKDLEPILGSRGRVAEILNRKRALSLDMIRRLHEHLDIPLDIL 115 Query: 137 I 137 I Sbjct: 116 I 116 >UniRef50_Q01YH3 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YH3_SOLUE Length = 134 Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 35/55 (63%) Query: 83 VIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +++ L+ + GL S L ++ KS VS +LSG+R ++ AKKLA RF + LF+ Sbjct: 80 MLQHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISKAQAKKLAARFKVPVELFL 134 >UniRef50_C1ZHD0 Predicted transcription regulator containing HTH domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHD0_PLALI Length = 143 Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 14/122 (11%) Query: 21 LAGIQNEEQYTQALELVDHLL----LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 LA I+++ +A +++D LL LN+ E LD + + +E+ E +A+A A Sbjct: 26 LASIRSDAHLVEAQKVIDGLLARERLNEGEATYLDALSDLVETYED------EHHAIAPA 79 Query: 77 MPGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 + ++ L++ GL+ + L E G +S +S VL GKR+ + + KLA F I A Sbjct: 80 TDADL--LQQLLEAKGLSQAQLSREAGLPRSTISEVLKGKRRFSRQMIHKLAAYFQIDAA 137 Query: 135 LF 136 + Sbjct: 138 VL 139 >UniRef50_Q2FMI1 Tetratricopeptide TPR_2 n=2 Tax=Methanospirillum hungatei JF-1 RepID=Q2FMI1_METHJ Length = 984 Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 4/45 (8%) Query: 25 QNEEQYTQALELVDHLLLNDPENPLL----DLVCAKITAWEESAP 65 +NEE+Y QA+ + D LL NDP+NP+ LV + ++E+ P Sbjct: 796 ENEERYVQAIAVYDQLLQNDPDNPVFLAEKGLVLDNLRRFDEAEP 840 >UniRef50_A1W8N9 Helix-turn-helix domain protein n=1 Tax=Acidovorax sp. JS42 RepID=A1W8N9_ACISJ Length = 409 Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 13/119 (10%) Query: 24 IQNEEQYTQALELVDHLLLNDPE----NPLLDLVCAKITAWEESAPEFAEFNAMAQAMPG 79 I+NE QY + L+L+ L+ + N L+L+ + +EE E A+ P Sbjct: 16 IRNERQYEECLQLLRSLMASASNGAKPNDELELLAMVLERYEE------ERYALTSIDP- 68 Query: 80 GIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + I M ++G + DL +GS S S +L+ KR L++EH + L I + I Sbjct: 69 -VDAIALKMAEFGWSQKDLATALGSASRASEILNRKRALSIEHIRVLHRELKIPAEVLI 126 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P67702 Uncharacterized HTH-type transcriptional regulat... 182 3e-45 UniRef50_Q1NVE9 Helix-turn-helix motif n=6 Tax=Bacteria RepID=Q1... 157 7e-38 UniRef50_A7ZQE8 Helix-turn-helix DNA-binding domain protein n=27... 152 3e-36 UniRef50_C7BKI9 Putative uncharacterized protein ygjM n=1 Tax=Ph... 151 5e-36 UniRef50_A4W5K3 Helix-turn-helix domain protein n=4 Tax=Enteroba... 151 6e-36 UniRef50_D0KFF0 Transcriptional regulator, XRE family n=10 Tax=B... 148 4e-35 UniRef50_B4SZX2 Sea41 n=35 Tax=Enterobacteriaceae RepID=B4SZX2_S... 137 1e-31 UniRef50_Q7MYT1 Similar to unknown protein n=1 Tax=Photorhabdus ... 137 2e-31 UniRef50_Q6LGF7 Putative uncharacterized protein Z4435 n=2 Tax=V... 133 2e-30 UniRef50_Q3J707 Transcription regulator containing HTH domain-li... 126 2e-28 UniRef50_D0SQN2 Helix-turn-helix domain-containing protein n=6 T... 125 4e-28 UniRef50_D2MJP6 Transcriptional regulator n=1 Tax=Candidatus Por... 123 1e-27 UniRef50_A1RER9 Putative DNA-binding protein n=2 Tax=Shewanella ... 122 3e-27 UniRef50_Q5NXR7 Putative uncharacterized protein n=1 Tax=Aromato... 122 5e-27 UniRef50_A7BUA0 Transcriptional regulator protein n=1 Tax=Beggia... 118 5e-26 UniRef50_C8U4T6 Predicted DNA-binding transcriptional regulator ... 115 5e-25 UniRef50_Q4KCW1 Putative uncharacterized protein n=1 Tax=Pseudom... 115 5e-25 UniRef50_B0SBN1 Transcription regulator containing HTH domain n=... 114 1e-24 UniRef50_A7BUG0 Transcriptional regulator n=2 Tax=Bacteria RepID... 113 2e-24 UniRef50_C1DP02 Transcritional regulatior protein n=23 Tax=Prote... 111 6e-24 UniRef50_B6J222 Transcriptional regulator n=3 Tax=Coxiella burne... 110 1e-23 UniRef50_B4WNC3 Putative uncharacterized protein n=1 Tax=Synecho... 110 1e-23 UniRef50_Q21CT0 Transcriptional regulator n=14 Tax=Proteobacteri... 108 7e-23 UniRef50_C4XM13 Xre family DNA-binding protein n=1 Tax=Desulfovi... 107 1e-22 UniRef50_C6NZN3 Putative transcription regulator with HTH domain... 107 1e-22 UniRef50_B1FYI7 Helix-turn-helix domain protein n=6 Tax=Burkhold... 106 1e-22 UniRef50_D2L5E8 Transcriptional regulator, XRE family n=1 Tax=De... 106 2e-22 UniRef50_D0YLK6 Transcriptional regulator, XRE family n=1 Tax=Kl... 99 4e-20 UniRef50_B0T536 Helix-turn-helix domain protein n=1 Tax=Caulobac... 98 8e-20 UniRef50_C7QXE5 Transcriptional regulator, XRE family n=5 Tax=Ch... 96 3e-19 UniRef50_Q8YMS4 All4855 protein n=4 Tax=Bacteria RepID=Q8YMS4_ANASP 95 8e-19 UniRef50_B7KKN6 Putative transcription regulator with HTH domain... 92 4e-18 UniRef50_Q6YRQ3 Slr6101 protein n=3 Tax=Chroococcales RepID=Q6YR... 91 1e-17 UniRef50_B0C5K8 HTH transcriptional regulator n=4 Tax=Cyanobacte... 90 3e-17 UniRef50_B2J1Y0 Transcription regulator containing HTH domain-li... 88 6e-17 UniRef50_B4WWD1 Putative uncharacterized protein n=1 Tax=Synecho... 88 7e-17 UniRef50_Q3SMY3 Transcriptional regulator, XRE family n=1 Tax=Ni... 87 2e-16 UniRef50_C1DNZ8 Putative uncharacterized protein n=1 Tax=Azotoba... 70 2e-11 Sequences not found previously or not previously below threshold: UniRef50_Q5NYI4 Predicted transcription regulator containing hel... 105 5e-22 UniRef50_B3PVM1 Putative transcriptional regulator protein n=1 T... 97 1e-19 UniRef50_C8TPW7 Probable transcriptional regulator n=3 Tax=root ... 94 2e-18 UniRef50_Q1VUA7 Helix-turn-helix motif n=2 Tax=Psychroflexus tor... 89 4e-17 UniRef50_A1AYN5 Transcriptional regulator, XRE family n=4 Tax=Al... 89 5e-17 UniRef50_B0SI61 Transcription regulator n=6 Tax=Bacteria RepID=B... 89 5e-17 UniRef50_A3JBK0 Plasmid-related protein n=2 Tax=Alteromonadales ... 88 9e-17 UniRef50_C4KD79 Putative transcription regulator with HTH domain... 88 1e-16 UniRef50_B3SED7 Putative uncharacterized protein n=1 Tax=Trichop... 87 2e-16 UniRef50_Q01YH3 Putative uncharacterized protein n=1 Tax=Candida... 84 1e-15 UniRef50_Q2RRG3 Transcription regulator containing helix turn he... 83 2e-15 UniRef50_A1W8N9 Helix-turn-helix domain protein n=1 Tax=Acidovor... 83 2e-15 UniRef50_C0GLZ8 Putative transcription regulator with HTH domain... 83 3e-15 UniRef50_Q1GIG8 Transcriptional regulator, XRE family n=3 Tax=Al... 82 6e-15 UniRef50_B6IV89 DNA-binding protein, putative n=1 Tax=Rhodospiri... 79 4e-14 UniRef50_B2VFH6 Predicted transcription regulator containing HTH... 78 6e-14 UniRef50_D2QDY8 Putative transcription regulator with HTH domain... 78 7e-14 UniRef50_B3KLY3 Possible transcriptional regulator n=2 Tax=Sinor... 78 1e-13 UniRef50_A3XES4 Putative uncharacterized protein n=1 Tax=Roseoba... 76 4e-13 UniRef50_Q88R60 Helix-turn-helix domain protein n=2 Tax=Pseudomo... 75 7e-13 UniRef50_Q20YM0 Transcriptional regulator, XRE family n=8 Tax=Pr... 75 8e-13 UniRef50_B7L3P4 Putative uncharacterized protein n=1 Tax=Methylo... 73 2e-12 UniRef50_D2QV84 Transcriptional regulator, XRE family n=1 Tax=Sp... 73 2e-12 UniRef50_C6W2R3 Transcriptional regulator, XRE family n=1 Tax=Dy... 73 4e-12 UniRef50_A9M4N9 Putative uncharacterized protein n=1 Tax=Vibrio ... 70 3e-11 UniRef50_A7BR65 Putative uncharacterized protein n=1 Tax=Beggiat... 69 6e-11 UniRef50_A8YMC7 Similar to tr|Q6YRQ3|Q6YRQ3 n=4 Tax=Cyanobacteri... 68 8e-11 UniRef50_B7K211 Putative transcription regulator with HTH domain... 67 2e-10 UniRef50_C6W022 Transcriptional regulator, XRE family n=1 Tax=Dy... 66 4e-10 UniRef50_A8YNZ8 Similar to tr|Q8YMS4|Q8YMS4 n=3 Tax=Chroococcale... 65 7e-10 UniRef50_B4B4A9 Transcription regulator containing HTH domain-li... 65 7e-10 UniRef50_C6VVJ1 Transcriptional regulator, XRE family n=2 Tax=Dy... 65 8e-10 UniRef50_C1ZHD0 Predicted transcription regulator containing HTH... 65 9e-10 UniRef50_A7M640 Putative uncharacterized protein n=6 Tax=Bactero... 62 9e-09 UniRef50_A8YBB5 Similar to tr|Q6YRQ3|Q6YRQ3 n=2 Tax=Microcystis ... 62 9e-09 UniRef50_B4WWD2 Putative uncharacterized protein n=1 Tax=Synecho... 60 2e-08 UniRef50_C6VXL2 Transcriptional regulator, XRE family n=1 Tax=Dy... 60 3e-08 UniRef50_B2J9X9 Putative uncharacterized protein n=1 Tax=Nostoc ... 59 4e-08 UniRef50_B3CGY1 Putative uncharacterized protein n=1 Tax=Bactero... 59 4e-08 UniRef50_UPI00019686DF hypothetical protein BACCELL_00041 n=1 Ta... 59 5e-08 UniRef50_UPI00016C502D hypothetical protein GobsU_17351 n=1 Tax=... 58 7e-08 UniRef50_B9YPT4 Putative transcription regulator with HTH domain... 58 9e-08 UniRef50_B4SAF3 Helix-turn-helix domain protein n=2 Tax=Chlorobi... 55 5e-07 UniRef50_A6W328 Putative uncharacterized protein n=1 Tax=Marinom... 53 2e-06 UniRef50_A8ZNL0 Transcriptional regulator containing helix turn ... 53 2e-06 UniRef50_A8YMN1 Genome sequencing data, contig C327 n=2 Tax=Micr... 53 3e-06 UniRef50_B5W819 Transcription regulator containing HTH domain-li... 52 7e-06 UniRef50_A7LWN9 Putative uncharacterized protein n=4 Tax=Bactero... 51 1e-05 UniRef50_A3NFB8 Helix-turn-helix domain protein n=5 Tax=Proteoba... 50 2e-05 UniRef50_Q01S53 Putative uncharacterized protein n=1 Tax=Candida... 48 1e-04 UniRef50_A3IXK8 Putative uncharacterized protein n=1 Tax=Cyanoth... 48 1e-04 UniRef50_D2MK09 Putative uncharacterized protein n=1 Tax=Candida... 47 2e-04 UniRef50_Q07XK7 Putative uncharacterized protein n=1 Tax=Shewane... 47 2e-04 UniRef50_A9ING0 Hypothetical prophage protein n=2 Tax=Bartonella... 45 6e-04 UniRef50_Q4C6I0 Putative uncharacterized protein n=1 Tax=Crocosp... 45 0.001 UniRef50_B2UDQ1 Plasmid maintenance system antidote protein, XRE... 45 0.001 UniRef50_Q2LU14 Transcriptional regulator, Cro/CI family n=1 Tax... 43 0.002 UniRef50_Q2LSU9 Transcriptional regulator helix turn helix n=10 ... 43 0.003 UniRef50_C4GIW1 Putative uncharacterized protein n=1 Tax=Kingell... 43 0.004 UniRef50_B8JHN9 Plasmid maintenance system antidote protein, XRE... 43 0.004 UniRef50_A4ESN9 Possible transcriptional regulator, XRE family p... 42 0.005 UniRef50_A8GXR6 Putative transcriptional regulator n=2 Tax=Ricke... 42 0.005 UniRef50_B4SEV6 Plasmid maintenance system antidote protein, XRE... 42 0.006 UniRef50_B1YM75 Helix-turn-helix domain protein n=1 Tax=Exiguoba... 42 0.007 UniRef50_B0JI99 Putative uncharacterized protein n=5 Tax=Cyanoba... 42 0.007 UniRef50_B4D5K7 Plasmid maintenance system antidote protein, XRE... 41 0.012 UniRef50_Q47NX3 Helix-turn-helix motif n=2 Tax=Nocardiopsaceae R... 41 0.013 UniRef50_Q2BCU9 Helix-turn-helix domain protein n=1 Tax=Bacillus... 41 0.014 UniRef50_B0BGE4 Putative integron gene cassette protein n=2 Tax=... 41 0.016 UniRef50_A1VX48 Putative uncharacterized protein n=1 Tax=Polarom... 40 0.020 UniRef50_D1A8A8 Transcriptional regulator, XRE family n=1 Tax=Th... 40 0.022 UniRef50_B7DVG5 Transposase IS3/IS911 family protein n=1 Tax=Ali... 40 0.027 UniRef50_A3XID6 Virulence-associated protein n=2 Tax=Bacteroidet... 40 0.030 UniRef50_UPI0001A42E87 hypothetical protein PcarcW_20908 n=1 Tax... 40 0.030 UniRef50_D2L5C8 Plasmid maintenance system antidote protein, XRE... 40 0.035 UniRef50_C0QEV8 Putative plasmid maintenance system antidote pro... 39 0.041 UniRef50_D1BQ02 Plasmid maintenance system antidote protein, XRE... 39 0.041 UniRef50_C4YWS8 HTH_3 family transcriptional regulator protein n... 39 0.049 UniRef50_Q0BVE8 Putative uncharacterized protein n=1 Tax=Granuli... 39 0.053 UniRef50_A8F1A3 Plasmid maintenance system antidote protein n=5 ... 39 0.055 UniRef50_Q5KNN6 Expressed protein n=2 Tax=Filobasidiella neoform... 39 0.060 UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Th... 39 0.062 UniRef50_C5M390 Predicted protein n=1 Tax=Candida tropicalis MYA... 38 0.065 UniRef50_Q5E5S6 Putative uncharacterized protein n=1 Tax=Vibrio ... 38 0.077 UniRef50_A5G5W2 Plasmid maintenance system antidote protein, XRE... 38 0.083 UniRef50_Q8YT04 Virulence-associated protein n=2 Tax=Nostocaceae... 38 0.093 >UniRef50_P67702 Uncharacterized HTH-type transcriptional regulator ygjM n=57 Tax=Enterobacteriaceae RepID=YGJM_ECOL6 Length = 138 Score = 182 bits (462), Expect = 3e-45, Method: Composition-based stats. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW Sbjct: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE Sbjct: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 Query: 121 HAKKLATRFGISPALFID 138 HAKKLATRFGISPALFID Sbjct: 121 HAKKLATRFGISPALFID 138 >UniRef50_Q1NVE9 Helix-turn-helix motif n=6 Tax=Bacteria RepID=Q1NVE9_9DELT Length = 153 Score = 157 bits (398), Expect = 7e-38, Method: Composition-based stats. Identities = 58/137 (42%), Positives = 90/137 (65%), Gaps = 1/137 (0%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITAW 60 + A I + L A F++ I N++ Y QAL L+D L+ + D + PL++++ I W Sbjct: 1 MGFAAIKERARDLFHEAGFISHIHNQDDYEQALALMDDLVQDYDNQRPLIEILAVAIKRW 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 E SA EFA+FN AV++ LM+Q+GL ++DLPEIGSKS+VS++L+G+R LT + Sbjct: 61 ENSAVEFADFNLQVDQQDSATAVLQVLMEQHGLGIADLPEIGSKSLVSKILNGERNLTRK 120 Query: 121 HAKKLATRFGISPALFI 137 H L+ RFG++PA+F+ Sbjct: 121 HIVALSQRFGLNPAIFL 137 >UniRef50_A7ZQE8 Helix-turn-helix DNA-binding domain protein n=27 Tax=Enterobacteriaceae RepID=A7ZQE8_ECO24 Length = 139 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 93/136 (68%), Gaps = 1/136 (0%) Query: 3 AIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEE 62 A ++A +L PFL G +E+ Y +ALELV++L+ D NPL+D + ++I +E Sbjct: 4 NAARAVKATRELVNAVPFLGGSDSEDDYREALELVEYLIEEDDTNPLIDFLASRIAEYEN 63 Query: 63 SAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEH 121 + +FAEF+ AMP G+A++RTL+DQ+ LT +DL EIGSKS+VS++LSG+R LT+ H Sbjct: 64 NNEKFAEFDKAVAAMPVGVALLRTLIDQHNLTYADLKNEIGSKSLVSQILSGQRSLTISH 123 Query: 122 AKKLATRFGISPALFI 137 K L+ RFG+ P F+ Sbjct: 124 IKALSARFGVKPEWFL 139 >UniRef50_C7BKI9 Putative uncharacterized protein ygjM n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BKI9_PHOAA Length = 140 Score = 151 bits (382), Expect = 5e-36, Method: Composition-based stats. Identities = 61/140 (43%), Positives = 89/140 (63%), Gaps = 2/140 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENP-LLDLVCAKITA 59 MI + + L + P+L I EQ+ +AL+L+D L N N L++++ I Sbjct: 1 MINFVVVQERANALFSEIPWLTYINTSEQHKEALDLIDELFKNYENNKGLIEILATAIER 60 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLT 118 +E++APEFAEFN + +P G+A +R LMDQ+GL +DL EIG S+VS++LSG R LT Sbjct: 61 YEDTAPEFAEFNQAIENIPTGVAALRVLMDQHGLKQADLKNEIGGASLVSQILSGTRSLT 120 Query: 119 LEHAKKLATRFGISPALFID 138 + H K L+TRF +S A+FID Sbjct: 121 VTHIKALSTRFKVSSAIFID 140 >UniRef50_A4W5K3 Helix-turn-helix domain protein n=4 Tax=Enterobacteriaceae RepID=A4W5K3_ENT38 Length = 139 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 1/138 (0%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 + A ++A ++L PFL G +E Y +AL LVD+L+ D ENPL+D + +KI + Sbjct: 2 ITDTARAIEATKQLVDAVPFLGGSSSESDYREALALVDYLIEKDDENPLIDFLASKIADY 61 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTL 119 E ++ FAEFN MP G+A++RTL+DQY L+ +DL EIGSKS+VS++LSG+R LT+ Sbjct: 62 ENNSDRFAEFNKSVAEMPVGVALLRTLIDQYKLSYADLKEEIGSKSLVSQILSGQRSLTI 121 Query: 120 EHAKKLATRFGISPALFI 137 H K L+ RFG+ P F+ Sbjct: 122 THIKALSARFGVRPEWFL 139 >UniRef50_D0KFF0 Transcriptional regulator, XRE family n=10 Tax=Bacteria RepID=D0KFF0_PECWW Length = 138 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 65/138 (47%), Positives = 96/138 (69%), Gaps = 1/138 (0%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWE 61 + AD ++A LT++ P L G + + Y AL+L ++LL ++P++PL+D++ AKI +E Sbjct: 1 MMYADAIKAANNLTSIVPLLGGSTSRKDYEDALKLTEYLLESEPDSPLIDMLTAKIDKYE 60 Query: 62 ESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLE 120 E APEF FN +A+P GIA++R LMDQ+GLT SD EIG KS+VSR+L+G+R LT++ Sbjct: 61 EDAPEFVAFNERIKALPAGIALLRILMDQHGLTQSDFEAEIGKKSLVSRILNGERTLTVD 120 Query: 121 HAKKLATRFGISPALFID 138 H LA RF I + F+D Sbjct: 121 HMSALAKRFDIPVSAFVD 138 >UniRef50_B4SZX2 Sea41 n=35 Tax=Enterobacteriaceae RepID=B4SZX2_SALNS Length = 142 Score = 137 bits (344), Expect = 1e-31, Method: Composition-based stats. Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 2/139 (1%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDP-ENPLLDLVCAKITAW 60 + I+ P + +N+ +Y +AL LV+ L+ +D ENPL +L+CA+I+ + Sbjct: 4 TSAKKIVDTFSDAVKTVPLMGEDRNDNEYRRALALVEFLVDHDDLENPLFELLCARISEY 63 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTL 119 E+ APEF N + P G++V+RTLMDQYGL +DL E+GSKS VS +L+G+R LT+ Sbjct: 64 EKHAPEFKALNQHLEKTPPGVSVLRTLMDQYGLKAADLANELGSKSNVSNILNGRRALTV 123 Query: 120 EHAKKLATRFGISPALFID 138 H K L RF + FI+ Sbjct: 124 NHIKALTQRFKLPADAFIE 142 >UniRef50_Q7MYT1 Similar to unknown protein n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7MYT1_PHOLL Length = 118 Score = 137 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 + +E+ Y AL +VD+L+ +D ENPL+D + AKI +E S FA FN MP G Sbjct: 1 MGNSTSEDAYNDALAMVDYLIEHDDENPLIDFLSAKIADYENSNERFAAFNKAVDDMPTG 60 Query: 81 IAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +A +R LMDQ+GL+ SDL EIGSKS++S++ SG R LT+ H K L+ RF + P LF+ Sbjct: 61 VAALRVLMDQHGLSYSDLKEEIGSKSLISQIFSGTRSLTIAHIKALSERFNVRPDLFL 118 >UniRef50_Q6LGF7 Putative uncharacterized protein Z4435 n=2 Tax=Vibrionaceae RepID=Q6LGF7_PHOPR Length = 141 Score = 133 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 84/139 (60%), Gaps = 2/139 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITA 59 ++ + + + ++ A P++ GI + +QY + +EL+D L+ + D L+DL+ I Sbjct: 3 IMNVEVMQEVSRQIEATMPWIHGITSRKQYDELIELMDSLVEDYDANQTLIDLMFPVIEQ 62 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLT 118 +E EF FNA ++ ++++R ++DQ GLT SDL EIG KS VS +LSG+R +T Sbjct: 63 YESKGEEFQAFNAHIDSINPAVSMLRLIIDQNGLTQSDLKAEIGGKSSVSMILSGQRSMT 122 Query: 119 LEHAKKLATRFGISPALFI 137 L+H + L+ RF I +F+ Sbjct: 123 LQHIRALSARFNIPTYMFV 141 >UniRef50_Q3J707 Transcription regulator containing HTH domain-like n=2 Tax=Nitrosococcus oceani RepID=Q3J707_NITOC Length = 155 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 7/138 (5%) Query: 7 ILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITAW 60 + + + A I+N+ Y + L+L++ L+ DP N L+ ++ + + Sbjct: 9 VADSFSHFSQAAHRFIHIRNKRDYQKTLDLIEELMTEAEDSRLDPLNDLIKILAGAVEEY 68 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTL 119 E + +F+ A+ + G++ +R LM+Q+ L S L E IGSKS+VS +LSG+R LT Sbjct: 69 ESKQDKMVQFHKEAEGIDPGVSALRLLMEQHALGASGLREEIGSKSLVSMILSGQRSLTK 128 Query: 120 EHAKKLATRFGISPALFI 137 EH KL+ RFG+SPA+F Sbjct: 129 EHIAKLSGRFGVSPAVFF 146 >UniRef50_D0SQN2 Helix-turn-helix domain-containing protein n=6 Tax=Proteobacteria RepID=D0SQN2_ACIJU Length = 133 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 14/139 (10%) Query: 5 ADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPLLDL---VCAKIT 58 A I QA + VAP L+ +NE+ + +E +D LL +D +PL+ L + ++ Sbjct: 3 AMIKQAVDHWHYVAPLLSKPENEDDFHTLVEALDELLDTVGDDESHPLMGLIHQLGDLVS 62 Query: 59 AWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLT 118 +E G A + LM+Q+GL SDL E+ ++S++S +LSGKR+L Sbjct: 63 DYENEHLPM--------PKGDGRAALAFLMEQHGLGQSDLAEVATQSVISEILSGKRQLN 114 Query: 119 LEHAKKLATRFGISPALFI 137 + H K L+ RF +S F Sbjct: 115 IRHIKALSERFNVSADTFF 133 >UniRef50_D2MJP6 Transcriptional regulator n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJP6_9BACT Length = 135 Score = 123 bits (309), Expect = 1e-27, Method: Composition-based stats. Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 18/137 (13%) Query: 7 ILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITAW 60 I ++ +++ L IQNE+ Y +A+E ++ LL P LLD + + AW Sbjct: 11 IQRSWTQVSD----LFRIQNEQDYDRAVERLNTLLDEVGTDDRHPLYSLLDTLGTVLHAW 66 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 EE E GG ++R M+++ L+ SDLPEIGS+ +VS +LSGKR+L + Sbjct: 67 EEQHHVMPEC--------GGAGLLRFFMEEHSLSQSDLPEIGSQGVVSEILSGKRELNVR 118 Query: 121 HAKKLATRFGISPALFI 137 L+ RFG+SP++F+ Sbjct: 119 QILALSKRFGVSPSVFV 135 >UniRef50_A1RER9 Putative DNA-binding protein n=2 Tax=Shewanella RepID=A1RER9_SHESW Length = 138 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 2/138 (1%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITAW 60 + IA + + + L A PF+ + +++ Y AL LV+ L+ + D LLDL+ +I + Sbjct: 1 MNIARVKKLVDDLQAEMPFIRRLNSKQDYLAALNLVEALIDDLDANGLLLDLLVLRINEY 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTL 119 EE + EF +FN + G AV+R LMD +GL ++D EIG + VS ++ K L+L Sbjct: 61 EEQSDEFKDFNNAVKNTDKGTAVLRVLMDLHGLKVTDFQHEIGDATTVSLIIDEKMPLSL 120 Query: 120 EHAKKLATRFGISPALFI 137 KLA RF I A FI Sbjct: 121 AQRHKLAVRFNIPCADFI 138 >UniRef50_Q5NXR7 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NXR7_AZOSE Length = 135 Score = 122 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 14/142 (9%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCA 55 +++ D++++ ++ A +++E Y L V + P LL +V Sbjct: 1 MSVTDVIESWAAVSDALGLGAPVRDESHYEALLAFVAEAFERFGGNESHPVFGLLSIVAD 60 Query: 56 KITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKR 115 +I +EE A + +R LM + G+ SDLPE+GS+S+VS VLSGKR Sbjct: 61 RIREYEERAHPWPPM--------APHEFLRQLMAERGIRQSDLPEVGSQSVVSEVLSGKR 112 Query: 116 KLTLEHAKKLATRFGISPALFI 137 L L K L+ RF + F+ Sbjct: 113 SLNLRQVKALSERFHLPMEAFV 134 >UniRef50_A7BUA0 Transcriptional regulator protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUA0_9GAMM Length = 133 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 14/137 (10%) Query: 7 ILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPLLDLV---CAKITAW 60 + + + +A L+ E++Y Q + ++D LL +D +PL DL+ I + Sbjct: 5 LAETVNHWSPIADILSVPHCEKEYQQMVAVLDELLNTVGDDETHPLADLLETISTLIEVY 64 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 EE A+ A V+R LM+++GL +DL E+G++S +S +L+G +L + Sbjct: 65 EEKHHSVADAPAY--------EVLRFLMEEHGLMPNDLSELGNQSEISAILNGHYQLNIF 116 Query: 121 HAKKLATRFGISPALFI 137 + + F +SPA+F+ Sbjct: 117 QIQYFSKLFHVSPAVFL 133 >UniRef50_C8U4T6 Predicted DNA-binding transcriptional regulator n=4 Tax=Proteobacteria RepID=C8U4T6_ECO10 Length = 119 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I+ E+ Y AL V+ + N+PE +++C I +E+ Sbjct: 3 IKPIRTEQDYEAALRAVEPMFDNEPEIDTPEGDFFEVMCLLIEEYEKKHYPI-------- 54 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 P I IR M+Q GLT+ DL P IG K+ V VL+G R LTL ++L +FGI Sbjct: 55 EPPSPIEAIRFRMEQQGLTVKDLEPAIGKKNRVYEVLNGTRSLTLPMIRRLHNQFGIPLE 114 Query: 135 LFI 137 + Sbjct: 115 SLV 117 >UniRef50_Q4KCW1 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCW1_PSEF5 Length = 212 Score = 115 bits (287), Expect = 5e-25, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 4/122 (3%) Query: 20 FLAGIQNEEQYTQALELVDHLLLNDP----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 F+ GI+ Y +A L+D L E +L + +I A++ + +F E NA + Sbjct: 29 FVHGIKTPADYERATNLLDELTDGRELSKIEEKILVELEDEILAYQRHSEQFRESNAAFE 88 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 A + +I+ LM+ GLT SDLPEIG K+ VS+VLSG R ++ + A LA RF + P Sbjct: 89 ATCTPVQLIKDLMETLGLTGSDLPEIGDKTAVSKVLSGDRPISHKMAYALAERFSMEPRA 148 Query: 136 FI 137 F+ Sbjct: 149 FV 150 >UniRef50_B0SBN1 Transcription regulator containing HTH domain n=3 Tax=Leptospira biflexa serovar Patoc RepID=B0SBN1_LEPBA Length = 133 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 14/140 (10%) Query: 4 IADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPEN------PLLDLVCAKI 57 I +I + V L+ ++QY + ++++D L+ N PLL+ V I Sbjct: 2 ILEIEKVKNVWDDVKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNLI 61 Query: 58 TAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKL 117 +E Q I V++ LM + LT DL +GS+ +VS +L+ KR+L Sbjct: 62 EEYENDH--------FIQPNAEPIQVLKFLMQENSLTQKDLNILGSQGVVSEILNEKREL 113 Query: 118 TLEHAKKLATRFGISPALFI 137 + K LA +F +SP++FI Sbjct: 114 NVRQIKALAEKFNVSPSVFI 133 >UniRef50_A7BUG0 Transcriptional regulator n=2 Tax=Bacteria RepID=A7BUG0_9GAMM Length = 132 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 15/135 (11%) Query: 9 QAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITAWEE 62 + A+ P + I NEE+Y A+E +++L+ P LLD++ I A+EE Sbjct: 7 EIQHHWVAIQPLFS-IDNEEEYDNAIERLNNLIDEVGTNEQHPLYGLLDMLGMVIHAYEE 65 Query: 63 SAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHA 122 E GI ++ MD++ LT SDLPEIG V +L KR L Sbjct: 66 KHYPMPEC--------SGIGMLEFFMDEHKLTCSDLPEIGEPGSVLEILKDKRVLDANQI 117 Query: 123 KKLATRFGISPALFI 137 L+ RF ISPA+FI Sbjct: 118 SALSERFHISPAVFI 132 >UniRef50_C1DP02 Transcritional regulatior protein n=23 Tax=Proteobacteria RepID=C1DP02_AZOVD Length = 125 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I+N++ Y AL+ + L N+PE +++ + A+E Sbjct: 3 VRPIRNDQDYRAALKALSPLFDNEPEPGTPEGDRFEVMLTLVEAYEAKH--------FPV 54 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 +P + I+ M+Q GLT SDL P IG + V VL+G R LTL KL + FGI Sbjct: 55 DLPNPVDAIKFRMEQLGLTASDLSPAIGRTNRVYEVLNGTRSLTLPMIWKLHSLFGIPAE 114 Query: 135 LFI 137 I Sbjct: 115 SLI 117 >UniRef50_B6J222 Transcriptional regulator n=3 Tax=Coxiella burnetii RepID=B6J222_COXB2 Length = 170 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 44/100 (44%), Positives = 66/100 (66%), Gaps = 1/100 (1%) Query: 13 KLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPEN-PLLDLVCAKITAWEESAPEFAEFN 71 L A F+ IQN+++Y +AL L++ L+ + N PL++++ A I WE A EF EFN Sbjct: 9 DLFEEAHFIGHIQNKKEYEEALALMEELIEDYNYNKPLIEILAASIERWENEASEFREFN 68 Query: 72 AMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVL 111 + + G AV++ LM+QY L +SD PEIGSKS+VS++L Sbjct: 69 KHIRRLQPGPAVLKVLMEQYHLGVSDFPEIGSKSLVSKIL 108 >UniRef50_B4WNC3 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNC3_9SYNE Length = 132 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 17/143 (11%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVC 54 M AIA ++ ++ + +AP L I+ E+ Y ++E ++ L+ P LL+ + Sbjct: 1 MTAIASDIR--KQWSVIAPILT-IRTEQDYDHSIERLNSLVDEVGTDETHPLYTLLETLS 57 Query: 55 AKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGK 114 I ++EE+ + GI V+ LM+++ LT SDLPE+G K V+++L+ + Sbjct: 58 LVIQSYEETHHAIPD--------SDGIEVLSYLMEEHALTESDLPELGEKVAVTKILARQ 109 Query: 115 RKLTLEHAKKLATRFGISPALFI 137 +L L H + LA RF +SP++FI Sbjct: 110 EELELHHIRALANRFNVSPSVFI 132 >UniRef50_Q21CT0 Transcriptional regulator n=14 Tax=Proteobacteria RepID=Q21CT0_RHOPB Length = 126 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 12/125 (9%) Query: 17 VAPFLAGIQNEEQYTQALELVDHLLLND---PENPLLDLVCAKITAWEESAPEFAEFNAM 73 +A L I+ E Y AL V+ L P+ LD++ I A+E Sbjct: 1 MATELKPIRTEADYQNALVEVEQLWGAKSGTPKGDRLDVLATLIDAYEARHDPM------ 54 Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 P I I+ M+Q GL+ DL P IG+++ V+ V++ +R L++E ++L GIS Sbjct: 55 --DPPDPIEAIQFRMEQQGLSRKDLEPLIGTRARVAEVMNRRRSLSIEMIRRLHEHLGIS 112 Query: 133 PALFI 137 + I Sbjct: 113 AEVLI 117 >UniRef50_C4XM13 Xre family DNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XM13_DESMR Length = 391 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 12/117 (10%) Query: 24 IQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 I+ E Y AL ++D L+ +P ++ L+ + +EE P Sbjct: 5 IKTEADYNDALAVIDSLMGAEPGTEDDERLEYWAKLVEVYEEEHYPI--------PKPTP 56 Query: 81 IAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 + I+ MDQ GLT DL P +GSK +VS VL+GKR+L+L+ L GI Sbjct: 57 LEAIKFAMDQQGLTRRDLEPFMGSKGVVSEVLAGKRRLSLDMIHALHAGLGIPLDTL 113 >UniRef50_C6NZN3 Putative transcription regulator with HTH domain n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZN3_9PROT Length = 142 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 14/137 (10%) Query: 7 ILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPL---LDLVCAKITAW 60 +Q+ + L I NE+ Y + L++ LL +D ++PL LDLV + + Sbjct: 12 AIQSSWQKFDTMAQLRPIHNEKSYVRMTALMNSLLDVAGDDEDHPLSSLLDLVSDMVAKY 71 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 E+ E A+ A P +R LM+ L L EI +S +S +L+GKRK++ Sbjct: 72 EQ------ERYAIEPADPK--DALRFLMESRDLKQDALSEIVPQSNLSAILAGKRKISAP 123 Query: 121 HAKKLATRFGISPALFI 137 A KL FG+SPALFI Sbjct: 124 LAGKLGKFFGVSPALFI 140 >UniRef50_B1FYI7 Helix-turn-helix domain protein n=6 Tax=Burkholderia RepID=B1FYI7_9BURK Length = 140 Score = 106 bits (266), Expect = 1e-22, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 15/141 (10%) Query: 3 AIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCAK 56 + DI ++ L A P + I+NE+ Y +EL L N+P L +V Sbjct: 9 SFPDIARSWAALQAQLP-ITPIRNEQDYQTMVELSSALADHLNGKENEPLTDLHAIVSDL 67 Query: 57 ITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRK 116 + +W+ A+ + +A P V+R L++ +GL DL I S ++VS +L+G+R Sbjct: 68 VRSWK------AQNVTLPKAEPR--EVLRHLLETHGLRQKDLMGIASPTVVSDILAGRRA 119 Query: 117 LTLEHAKKLATRFGISPALFI 137 ++ + AK LA RF + F+ Sbjct: 120 ISKKVAKALAQRFQTDVSAFL 140 >UniRef50_D2L5E8 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5E8_9DELT Length = 140 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 16/134 (11%) Query: 12 EKLTAVAPFLAG--IQNEEQYTQALELVDHLLL---NDPENPLLDLV---CAKITAWEES 63 + + I+++ Y + LV+ LL +D +PL D++ ++ A+EE+ Sbjct: 15 QAWLPFKELVGPTTIKSQADYDRIASLVNVLLDAIRDDATHPLSDVLHYLTIQMEAYEEA 74 Query: 64 APEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAK 123 E AV+R LM+Q+GL SDL + +S +S +L+GKR ++ E AK Sbjct: 75 HVAIPEA--------DPKAVLRFLMEQHGLNQSDLGDCAPQSHISAILAGKRGISKETAK 126 Query: 124 KLATRFGISPALFI 137 KLA RF ++ LF+ Sbjct: 127 KLAKRFHVNADLFL 140 >UniRef50_Q5NYI4 Predicted transcription regulator containing helix turn helix domain n=18 Tax=Proteobacteria RepID=Q5NYI4_AZOSE Length = 147 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I E Y L+ + L+ DP E LD++ + A+E Sbjct: 3 IRPIHTEIDYKATLKEISALMEFDPDPGTPEGDRLDILTTLVKAYEAKHFPIGA------ 56 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 P + I+ M+Q GL++ DL P IG + V +L+ KR LTL ++L GI Sbjct: 57 --PDPVEAIKFRMEQSGLSVKDLEPFIGRSNRVYEILNRKRPLTLGMIRRLHQGLGIPAE 114 Query: 135 LFI 137 + I Sbjct: 115 VLI 117 >UniRef50_D0YLK6 Transcriptional regulator, XRE family n=1 Tax=Klebsiella variicola At-22 RepID=D0YLK6_KLEVA Length = 192 Score = 98.9 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 14/121 (11%) Query: 24 IQNEEQYTQALELVDHLLLND-----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I++ E Y A+ + L D + +L+ I +E+S P Sbjct: 7 IKSHEDYEVAMARLLALADTDLKEGTDDFDEFELLSLLIGHYEDSHYPI--------DKP 58 Query: 79 GGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I I+ MDQ GLT +D+ + +GS S VS VLSGKRKL+L ++L GI + I Sbjct: 59 TPIEAIKFRMDQMGLTYADMRQYLGSASKVSEVLSGKRKLSLSMIRRLHNGLGIPADILI 118 Query: 138 D 138 Sbjct: 119 Q 119 >UniRef50_B0T536 Helix-turn-helix domain protein n=1 Tax=Caulobacter sp. K31 RepID=B0T536_CAUSK Length = 124 Score = 98.1 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 14/126 (11%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNA 72 ++ I++E Y QAL + N+PE +L+ + +EE F Sbjct: 1 MTKISIIRDEAAYAQALVEFEAFFDNEPEARSDAGDRFELLGLLLAKYEEERFPFPR--- 57 Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 G + IR M++ GL SDL E+ GS+S S +L+G R+LTL + L +GI Sbjct: 58 -----TGPVEAIRFAMERQGLGQSDLAELLGSRSRASEILNGHRELTLPQIRLLTKSWGI 112 Query: 132 SPALFI 137 I Sbjct: 113 PAQALI 118 >UniRef50_B3PVM1 Putative transcriptional regulator protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PVM1_RHIE6 Length = 125 Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+N++ Y AL L+ L PE LD++ + A+E + Sbjct: 4 LKPIRNDDDYEDALLLLKQLWGAKDGSPEADKLDILATLLDAYEAGRYPI--------DL 55 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I I M+Q GLT DL P +GS+ V+ +L+ KR L+L+ ++L I + Sbjct: 56 PDPIDAIIFRMEQQGLTRKDLEPILGSRGRVAEILNRKRALSLDMIRRLHEHLDIPLDIL 115 Query: 137 ID 138 I Sbjct: 116 IQ 117 >UniRef50_C7QXE5 Transcriptional regulator, XRE family n=5 Tax=Chroococcales RepID=C7QXE5_CYAP0 Length = 132 Score = 95.8 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 13/121 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLN----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+NE +Y Q +++ L++N E +L L+ + I ++E + Sbjct: 20 KVIENEAEYQQYSDILIELMMNPNRSSEETEILKLIASLIKEFDEKQEQ--------PEP 71 Query: 78 PGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +++ LM+++ + DL +IGSK +VS V++GKR ++ AK LA F +SPALF Sbjct: 72 ASPHEILQHLMEEHNMRQVDLVDKIGSKGVVSEVVNGKRAISKSQAKTLAGIFHVSPALF 131 Query: 137 I 137 + Sbjct: 132 L 132 >UniRef50_Q8YMS4 All4855 protein n=4 Tax=Bacteria RepID=Q8YMS4_ANASP Length = 126 Score = 94.7 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%) Query: 22 AGIQNEEQYTQALELVDHLLLND---PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+NE Y AL+ + L ++ PE+ L+++ + A+E+ + A P Sbjct: 5 RPIRNEADYRAALDEIARLFDSELNTPESDRLEVLTTLVEAYEQKHYQIAA--------P 56 Query: 79 GGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I I ++ GL+++DL P IGSK+ +S +L ++ LTLE ++L + GI + I Sbjct: 57 DPIEAILYYLESRGLSVNDLEPVIGSKTEISNILHRRQALTLEIIRRLHQQLGIPAEVLI 116 Query: 138 D 138 Sbjct: 117 Q 117 >UniRef50_C8TPW7 Probable transcriptional regulator n=3 Tax=root RepID=C8TPW7_ECO26 Length = 218 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 14/121 (11%) Query: 24 IQNEEQYTQALELVDHLLLND-----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+N E++ A+E + L +D + +L+ I +E P Sbjct: 9 IKNSEEHAAAMERLIELASSDLQPGTEDFDEFELLGLLIEHYESREFPM--------DKP 60 Query: 79 GGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I I+ MDQ GL+ +D+ + IGS S VS VL+ KR L+L ++L GI + I Sbjct: 61 DPIEAIKFRMDQQGLSYADMKQYIGSASKVSEVLNRKRPLSLSMIRRLHDGLGIPADILI 120 Query: 138 D 138 Sbjct: 121 Q 121 >UniRef50_B7KKN6 Putative transcription regulator with HTH domain n=2 Tax=Cyanothece RepID=B7KKN6_CYAP7 Length = 132 Score = 92.4 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 13/120 (10%) Query: 23 GIQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I EE +AL +V+ L+ EN L DL+ I +E+ EF + P Sbjct: 21 PITTEEDNEKALAIVEELMHRKNRSLEENELYDLLIVLIEKFEQ------EFYYTQNSNP 74 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + + LM+Q G+T ++L ++ S + + ++ GKR++T E+A+ L F + P+LFI Sbjct: 75 YSM--LLFLMEQQGITKTELGKVFESLEIAADLVEGKREITQEYAQILGRFFQVEPSLFI 132 >UniRef50_Q6YRQ3 Slr6101 protein n=3 Tax=Chroococcales RepID=Q6YRQ3_SYNY3 Length = 139 Score = 90.8 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%) Query: 22 AGIQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I++ E + +V++LL + E L+++ I +E+ + Sbjct: 15 RPIRSPEDFGATQAVVNNLLDKEVLTADEEDYLEVLGTLIYEYEQQQGDII-------PD 67 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 G +++ L+++Y L DL P ++S+VS VL GKR+LT H ++LAT F +SPA+F Sbjct: 68 IHGTELLQILIEEYELKQKDLVPIFKTESIVSEVLKGKRQLTTRHIQELATFFHVSPAVF 127 Query: 137 I 137 Sbjct: 128 F 128 >UniRef50_B0C5K8 HTH transcriptional regulator n=4 Tax=Cyanobacteria RepID=B0C5K8_ACAM1 Length = 132 Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 13/121 (10%) Query: 22 AGIQNEEQYTQALELVDHLLL----NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I +E + A+ L L + LLDL+ I +E+SA + Sbjct: 20 KVIASERENEAAIALAQKLEHLPNQTSEQEALLDLLVMLIEKYEDSAYPIL--------V 71 Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 V+ LM+ G DL IGS+ +VS V++GKR +++ AK LA FG+ LF Sbjct: 72 SSPREVLLHLMEAKGCIQEDLVGVIGSRGVVSEVVNGKRGISIAQAKSLADYFGVDAGLF 131 Query: 137 I 137 I Sbjct: 132 I 132 >UniRef50_Q1VUA7 Helix-turn-helix motif n=2 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VUA7_9FLAO Length = 131 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I++++ Y ALE ++ + + E +++ I +E Sbjct: 12 VKPIKSDKDYRNALERLEVIFDASIDTKEGDEAEILSLVIENYENEHYPIEA-------- 63 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I I+ M++ + DL IG KS VS VL+ K++LT++ ++L IS ++ Sbjct: 64 PDPIEAIKIRMEELNMRQKDLVGIIGGKSRVSEVLNRKKRLTVDMIRELERILQISASVL 123 Query: 137 ID 138 ++ Sbjct: 124 VN 125 >UniRef50_A1AYN5 Transcriptional regulator, XRE family n=4 Tax=Alphaproteobacteria RepID=A1AYN5_PARDP Length = 125 Score = 88.9 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLN-----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I+ E Y AL + N PE D++ I A+E+ E Sbjct: 3 VRPIRTEADYQWALAEIAPYFDNQPEPGTPEADRFDVLADLIEAYEDRHHPIPEA----- 57 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 + +++ M+ G T +DL + GS S V++ KR LT+ K++T +G+ Sbjct: 58 ---DPVDLLKAHMEATGRTQADLGRLLGSTPRASEVVNRKRALTVAMIHKISTEWGLPAD 114 Query: 135 LFI 137 + Sbjct: 115 CLV 117 >UniRef50_B0SI61 Transcription regulator n=6 Tax=Bacteria RepID=B0SI61_LEPBA Length = 134 Score = 88.9 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+N++ + +AL ++ L N E LD++ + A+E Sbjct: 3 IKPIKNKKDHLEALSEIEKLWDARKNTTEYDRLDILITLVDAYETKHYPI--------DD 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I ++++MD + DL IG +S + +LS KRKLTLE +K+ GI + Sbjct: 55 PDPIEALKSVMDDRNMKSVDLGNLIGGRSRATEILSRKRKLTLEMIRKINQNLGIPTDIL 114 Query: 137 I 137 + Sbjct: 115 V 115 >UniRef50_B2J1Y0 Transcription regulator containing HTH domain-like protein n=2 Tax=Cyanobacteria RepID=B2J1Y0_NOSP7 Length = 142 Score = 88.5 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%) Query: 22 AGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+ EE+Y +AL V+ ++ L + E L +L+ I +EE Sbjct: 20 KPIKTEEEYNRALTAVEGMMSGELAEAETALFELLVLLIENYEEHHYSM--------GKS 71 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 +A + +LM ++ + L+ L EI GS +V V++G+RK+T AK LA F Sbjct: 72 KPVATLESLMHEFDVELTSLVEIFGSVKIVKEVVNGQRKVTQSEAKSLAKFFN 124 >UniRef50_B4WWD1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WWD1_9SYNE Length = 149 Score = 88.1 bits (217), Expect = 7e-17, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLNDP----ENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+++ +E+V+ L+ + E +L+ I +EE ++ Sbjct: 30 KVIKSKSGLDATVEVVESLMNKEELTTDEKDYKELLIMLIDDYEEKKFSISDIY------ 83 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 G+ +++ LM + GL DL I +KS+VS +LSG+R+LT ++ ++LA F I + F Sbjct: 84 --GVELLKGLMKERGLRQKDLVHIFKTKSVVSEILSGQRELTPQYTRRLAEYFNIPDSAF 141 >UniRef50_A3JBK0 Plasmid-related protein n=2 Tax=Alteromonadales RepID=A3JBK0_9ALTE Length = 396 Score = 87.7 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 14/126 (11%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNA 72 + I+ E++ QA+ V L+ DP+ LDL+ + +E Sbjct: 1 MGHIKIIKTPEEHEQAMARVMGLMDADPQPGSQDADELDLLALLVERYERKEFPI----- 55 Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 +PG + I MDQ GL DL P IGS S V+ VL+G R L+L ++L GI Sbjct: 56 ---DVPGPLDAICFRMDQQGLKKKDLIPYIGSASKVTEVLNGTRNLSLNMIRRLTDGLGI 112 Query: 132 SPALFI 137 + I Sbjct: 113 PADVLI 118 >UniRef50_C4KD79 Putative transcription regulator with HTH domain n=1 Tax=Thauera sp. MZ1T RepID=C4KD79_THASP Length = 126 Score = 87.7 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+ + ++ +AL V+ L E+ L+++ + A+E + Sbjct: 3 LKPIRTDSEHAEALAEVERLWDVPTGSAESDRLEVLAMLVEAYETARFPIEA-------- 54 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I + +MD GLT DL P IG + V+ +++ R L++ ++L++ G+ + Sbjct: 55 PDPIEFLEYVMDSRGLTRKDLEPYIGPRGRVADIMNRARPLSIGMIRRLSSGLGLPADVL 114 Query: 137 ID 138 I Sbjct: 115 IQ 116 >UniRef50_B3SED7 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SED7_TRIAD Length = 165 Score = 87.3 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 12/116 (10%) Query: 27 EEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAV 83 E Y AL +D L N + L+++ + +EE + + P I Sbjct: 46 EYDYKNALNTIDKLWDAKENTEKGDYLEILTTLVEKYEEEHYDISA--------PDPIEA 97 Query: 84 IRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 I+ +M+Q + ++L +I GS+S VS +L+ +RKL L + L I + + Sbjct: 98 IKFIMEQKNIKRTELEKILGSRSRVSEILNKQRKLNLRMIRNLHNTLSIPYEILAE 153 >UniRef50_Q3SMY3 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SMY3_NITWN Length = 124 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCA--KITAWEESAPEFAEFNAMAQAMP 78 L IQN+ + A LV L+ + +V I A+E + + P Sbjct: 5 LIVIQNQADHEAAKALVGKLIQSSDAADRARMVAQSRLIEAYERTRW--------PRKAP 56 Query: 79 GGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++ L++Q+GLT +DL P +G+ S VS V+SGKR+L++ K+L RF I L I Sbjct: 57 PLPDLLSYLVEQHGLTRADLVPLLGTASRVSEVMSGKRELSMTMVKRLRERFHIPADLLI 116 >UniRef50_Q01YH3 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YH3_SOLUE Length = 134 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 16/138 (11%) Query: 6 DILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITA 59 D + E L P + I +E +Y + L L+ + E LL+++ I Sbjct: 7 DASKYRELLNDTLPLV--IHDEAEYQRLLHGAGKLMEKVDDETTEEEGRLLEMLSMLIEE 64 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTL 119 +E+ +++ L+ + GL S L ++ KS VS +LSG+R ++ Sbjct: 65 YEDR--------VHPLPATSPHKMLQHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISK 116 Query: 120 EHAKKLATRFGISPALFI 137 AKKLA RF + LF+ Sbjct: 117 AQAKKLAARFKVPVELFL 134 >UniRef50_Q2RRG3 Transcription regulator containing helix turn helix domain n=20 Tax=Bacteria RepID=Q2RRG3_RHORT Length = 127 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 12/125 (9%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMA 74 L I+ + AL ++ L+ +P E LD++ I +E Sbjct: 1 MGILKPIRTPADHAAALARLEALMDAEPGTAEGEDLDVLADLIEHYESKQVPI------- 53 Query: 75 QAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 P A I M+Q GL+ DL P IGS++ V VL+G R LTL A+ L GI Sbjct: 54 -GYPPPHAAIAFRMEQAGLSPQDLVPLIGSQAEVLEVLAGTRPLTLAMARALHIHLGIPA 112 Query: 134 ALFID 138 + + Sbjct: 113 EVLLQ 117 >UniRef50_A1W8N9 Helix-turn-helix domain protein n=1 Tax=Acidovorax sp. JS42 RepID=A1W8N9_ACISJ Length = 409 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPE----NPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 + I+NE QY + L+L+ L+ + N L+L+ + +EE Sbjct: 13 IRVIRNERQYEECLQLLRSLMASASNGAKPNDELELLAMVLERYEEERYALTSI------ 66 Query: 77 MPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 + I M ++G + DL +GS S S +L+ KR L++EH + L I + Sbjct: 67 --DPVDAIALKMAEFGWSQKDLATALGSASRASEILNRKRALSIEHIRVLHRELKIPAEV 124 Query: 136 FI 137 I Sbjct: 125 LI 126 >UniRef50_C0GLZ8 Putative transcription regulator with HTH domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLZ8_9DELT Length = 139 Score = 83.1 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+N+ +Y QALE ++ L ++ E L+L+ + +E Sbjct: 3 LGLIKNDTEYYQALERIETLTSAGMDHEEERELELLVHLVDKYEREQYPI--------EY 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P ++ IR M GL DL EI GS S VS VL+ KR+L+L + L I + Sbjct: 55 PDPVSAIRLRMQDLGLRQKDLAEIIGSSSKVSEVLNKKRRLSLAMIRALHAHLNIPAEVL 114 Query: 137 ID 138 + Sbjct: 115 LQ 116 >UniRef50_Q1GIG8 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=Q1GIG8_SILST Length = 123 Score = 82.0 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 12/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ + + AL ++ L +P LD++ + +EE F E Sbjct: 3 IRPIRADADHAAALSRIEELWGAEPGTEAGDELDILVDLVEHYEERQFPFPEL------- 55 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 I +++ M+ G T +DL + GS+ S VL+ KR LT++ KL++ + I Sbjct: 56 -APIDLLKAHMEATGRTQADLAALLGSRPRASEVLNRKRALTVDMIHKLSSEWHIPAECL 114 Query: 137 I 137 + Sbjct: 115 V 115 >UniRef50_B6IV89 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IV89_RHOCS Length = 120 Score = 78.9 bits (193), Expect = 4e-14, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 13/122 (10%) Query: 21 LAGIQNEEQYTQALELVDHLLLN---DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ E + AL +D L+ PE L+++ + +E A Sbjct: 3 IRPIKTPEDHKAALARIDDLMDAAEGTPEVAELEVLSILVERYERDAFPI--------DP 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGK-RKLTLEHAKKLATRFGISPAL 135 P + I+ M+Q G DL ++ GS+S S ++ G ++L+L ++L + I Sbjct: 55 PSALDAIQFRMEQAGYEQRDLAKVLGSRSRASEIVHGSIQRLSLTQIRRLHQAWKIPADA 114 Query: 136 FI 137 I Sbjct: 115 LI 116 >UniRef50_B2VFH6 Predicted transcription regulator containing HTH domain n=1 Tax=Erwinia tasmaniensis RepID=B2VFH6_ERWT9 Length = 156 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 13/120 (10%) Query: 23 GIQNEEQYTQALELVDHLLL--NDPEN---PLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 ++N+ + L+D L D E+ + V ++ +E + Sbjct: 42 PVENDGDLQGRMALIDALYACATDVEHFAAQCAERVADRVHEYEMKHLRMPDV------- 94 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + LM + G+ DL I ++S++S +++GKR + + K LA F + +FI Sbjct: 95 -SPGEALSVLMKERGIRQVDLQHIATQSVISDIINGKRAMNVSQIKGLARFFRVPVDMFI 153 >UniRef50_D2QDY8 Putative transcription regulator with HTH domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QDY8_9SPHI Length = 117 Score = 78.1 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLLND---PENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ E Y AL+L+D L+ + + LD++ + +E A Sbjct: 3 IKPIRTETDYRAALQLIDTLVDCEDGSEQADQLDILSILVENYENDHYPIAP-------- 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I IR M+Q G++ ++ +G + +L+ + LTL K L + I Sbjct: 55 PDPIDAIRFRMEQTGMSEQEIGIYMGGEVAARAILNREEPLTLSMIKVLYRQLHIPAESL 114 Query: 137 I 137 + Sbjct: 115 L 115 >UniRef50_B3KLY3 Possible transcriptional regulator n=2 Tax=Sinorhizobium meliloti RepID=B3KLY3_RHIME Length = 126 Score = 77.7 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 +Q+E +Y AL+ V N+P E D + I +E Sbjct: 7 FRTLQSEGEYNAALKEVRPYFENEPDEGSEEAAHFDALVLLIEQYEGKHYPI-------- 58 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 + V++++M T +DL IGSK+ + +L+GKR++ L+ +KL+ + I Sbjct: 59 PTASPVEVVKSVMAANNYTRADLVAVIGSKARAADLLNGKREINLDQIRKLSKEWNIPAG 118 Query: 135 LFI 137 I Sbjct: 119 SLI 121 >UniRef50_A3XES4 Putative uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XES4_9RHOB Length = 129 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 L I+ +E AL ++ P E D++ I A+E Sbjct: 3 LRAIRTDEDLDWALAEIEQYFDTPPVPGTEEADRFDILTDLIEAYENREYPIEAL----- 57 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 I ++ MD SDL E +G K S +++ KR LTL +K+ T + I A Sbjct: 58 ---DPIETLKVFMDIKKKKQSDLAELVGGKPRASEIINRKRPLTLRMIQKINTSWKIPAA 114 Query: 135 LFI 137 I Sbjct: 115 SLI 117 >UniRef50_Q88R60 Helix-turn-helix domain protein n=2 Tax=Pseudomonas putida RepID=Q88R60_PSEPK Length = 179 Score = 75.0 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 13/120 (10%) Query: 23 GIQNEEQYTQALELVDHLLLNDPENP-----LLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+++ + + L+D L + ++V ++ +E + + Sbjct: 64 PIKDDAELEARMALIDELYSHADSEGHAAARFAEMVADRVYEYESESVLVPFASQA---- 119 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + L+ G+ DL I ++S VS +L+ KRK+T+ K A F + F+ Sbjct: 120 ----EALAFLLSDRGVKQKDLSAIATQSAVSEILNNKRKMTVAQIKGFAEFFSVPVEFFM 175 >UniRef50_Q20YM0 Transcriptional regulator, XRE family n=8 Tax=Proteobacteria RepID=Q20YM0_RHOPB Length = 125 Score = 74.6 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 11/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+N++ + AL ++ L + LD++ + +EES + + Sbjct: 3 IRPIRNDDDHAAALTEIEKLWGAPTGTDDGDKLDVLATLVEKYEESRWPAVD-------I 55 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 I ++ + G T ++L ++ GS+S S +L +R LT+E + ++ + I L Sbjct: 56 ADPIDLLHYAISDLGHTQAELADLLGSRSRASEILGRQRALTVEMIRTISEAWKIPAELL 115 Query: 137 I 137 + Sbjct: 116 V 116 >UniRef50_B7L3P4 Putative uncharacterized protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L3P4_METC4 Length = 137 Score = 73.5 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 14/119 (11%) Query: 24 IQNEEQYTQALELVDHLLLN-----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+ E +Y A+E +D L N PE + + I+ +E+ E Sbjct: 7 IKTEAEYKAAMEEIDALFANLPEPGTPEGDRFEFLSLLISHYEDQHFPIPEA-------- 58 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 + ++R + G + ++L E+ GS+ S V++ KR LTL+ + ++ + + Sbjct: 59 DPVDLLRFAITDMGRSQTELAELLGSRPRASEVMNRKRALTLDMIRGISAAWKLPFEAL 117 >UniRef50_D2QV84 Transcriptional regulator, XRE family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QV84_9SPHI Length = 148 Score = 73.5 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 14/119 (11%) Query: 24 IQNEEQYTQALELVDHLLLN----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPG 79 I++E+QY ++ L+ + ++L+ I W+ F + Sbjct: 9 IKSEKQYRDYCTDLETLVTGNDQGENTQDEIELLTYLIEKWDAEHNSFEDV--------D 60 Query: 80 GIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 I ++ LM + L DL +I SKS+VS +L KR L+ E + L++ F +S F Sbjct: 61 PIELLTALMSEKSLKAKDLTQILGVSKSLVSDILHYKRGLSKEIIRTLSSYFSVSQEAF 119 >UniRef50_C6W2R3 Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2R3_DYAFD Length = 134 Score = 72.7 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 18/127 (14%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPEN---------PLLDLVCAKITAWEESAPEFAEFN 71 + I ++ + +A ++++ L+ D +L+ + +E+ Sbjct: 13 IKPITSQADFEEAGKVIEALMDADLLENETERKKALDILEAITVLAIDYEKKHYPM---- 68 Query: 72 AMAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 P I I+ M+Q L+ D+ P G ++ VS VL+ KR LT++ ++++ G Sbjct: 69 ----PKPDPIEAIKERMEQLHLSRKDVAPYFGGENRVSEVLNKKRSLTIKMIREISKNLG 124 Query: 131 ISPALFI 137 I + Sbjct: 125 IPAETLL 131 >UniRef50_C1DNZ8 Putative uncharacterized protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DNZ8_AZOVD Length = 67 Score = 70.4 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 88 MDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 MDQY D EIG KSMVS VL G RKL+ +H L RF +SPA+F D Sbjct: 1 MDQYQSKTDDFKNEIGGKSMVSMVLGGTRKLSKDHIHALCDRFDLSPAVFFD 52 >UniRef50_A9M4N9 Putative uncharacterized protein n=1 Tax=Vibrio sp. 23023 RepID=A9M4N9_9VIBR Length = 113 Score = 69.6 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 12/97 (12%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENP---LLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ EE AL + + +P P LD++ + A+EE+ A Sbjct: 3 IKPIKTEEDNRAALARIAEIFDAEPNTPEGDELDVLATLVEAFEEAHYPIAP-------- 54 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSG 113 P I I+ M+Q GL L P +G +S V+ +LS Sbjct: 55 PDPIEAIKFRMEQQGLEDRVLVPFLGQRSCVTEILSR 91 >UniRef50_A7BR65 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BR65_9GAMM Length = 155 Score = 68.9 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 9/120 (7%) Query: 22 AGIQNEEQYTQALELVDHLLL-NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP-- 78 + IQ E++ + +++D L+ +N ++ + I + EF + +P Sbjct: 42 SPIQTEDEVLERAKVMDELMDMATGDNDIVMIFANAI------SDRIEEFENVQLDLPRM 95 Query: 79 GGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 V+ LM + + DL EI +++ +L+ +R +T+ K + F + +FID Sbjct: 96 KSGEVLANLMHLHHIESKDLFEIAPPNVIVELLNQQRSMTIAQVKAFSQFFHVPATIFID 155 >UniRef50_A8YMC7 Similar to tr|Q6YRQ3|Q6YRQ3 n=4 Tax=Cyanobacteria RepID=A8YMC7_MICAE Length = 132 Score = 68.1 bits (165), Expect = 8e-11, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 13/121 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+ E + +AL +V+ L+ E+ L +L+ I +E+S Q Sbjct: 20 KVIKTEAENEKALAIVEELMHRQQRTPEEDELYELLIFLIGNFEKSFYL--------QES 71 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +++ LM+Q + D+ I GS + S ++ GK ++ E AK L F + +L Sbjct: 72 TTSHSMLLFLMEQQSVNKKDIARILGSDKIASSLIEGKGSISQEQAKLLGHFFHVDYSLL 131 Query: 137 I 137 + Sbjct: 132 M 132 >UniRef50_B7K211 Putative transcription regulator with HTH domain n=3 Tax=Chroococcales RepID=B7K211_CYAP8 Length = 146 Score = 66.5 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 12/122 (9%) Query: 24 IQNEEQYTQALELVDHLLLND-----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I +E+Y Q L + ++L+ E L L+ I +EE+ +F + Sbjct: 24 IDTQEEYEQYLAVAENLIAKKDNRTPEETALFRLLVRLIEDYEENIYSLEDFTNL----- 78 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +++ L++ T DL I S+ ++ +++G++ + + AK L F + P+LF Sbjct: 79 SAHEILQHLLEYSNTTPEDLSNIINCSQELILALINGEQTINQQQAKLLGMYFKVDPSLF 138 Query: 137 ID 138 I+ Sbjct: 139 IE 140 >UniRef50_C6W022 Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W022_DYAFD Length = 145 Score = 65.8 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 12/120 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLN---DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+N EQY + +L + D +DL+ I ++ N + + Sbjct: 7 KVIRNFEQYNNYCNELIQMLESENPDQYEEEIDLLTVLIEHYDAE-------NTIFKGEF 59 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 + ++++LM + + D+ E+ SK VS +L+ K+ ++ + +KLATRF + F Sbjct: 60 DPVELLKSLMKDHQMKAKDIAELLNVSKGYVSEILNYKKGMSKDVIRKLATRFAMRQEAF 119 >UniRef50_A8YNZ8 Similar to tr|Q8YMS4|Q8YMS4 n=3 Tax=Chroococcales RepID=A8YNZ8_MICAE Length = 141 Score = 65.0 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 13/121 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKIT----AWEESAPEFAEFNAMAQAM 77 I+NE + QA+ L + L + + + + +E+ E Sbjct: 27 KVIENEAENEQAINLAEALSHRENRSLEETTLLNLLLTLIEKYEQDHYPLEESE------ 80 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +++ LM+ L DL +I GSK++VS +L G++ +T + A KL F + +LF Sbjct: 81 --PHSILWELMEANNLQEKDLSDILGSKTIVSDILIGQQIITEKQAVKLGQFFHVDSSLF 138 Query: 137 I 137 + Sbjct: 139 L 139 >UniRef50_B4B4A9 Transcription regulator containing HTH domain-like protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B4A9_9CHRO Length = 140 Score = 65.0 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 12/97 (12%) Query: 20 FLAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 L I+ E Y +AL ++ L N PE LDL+ + A+E+ A Sbjct: 2 LLKPIKTETDYQKALAEIESLFDAQPNTPEYERLDLLTTLVEAYEKIHYPIAP------- 54 Query: 77 MPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLS 112 P I I ++ GL++ L +I +K ++ +L Sbjct: 55 -PDPIEAILYYLNSRGLSIDALQNDIENKINITDILE 90 >UniRef50_C6VVJ1 Transcriptional regulator, XRE family n=2 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VVJ1_DYAFD Length = 131 Score = 65.0 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 12/119 (10%) Query: 23 GIQNEEQYTQALE---LVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPG 79 I +E +Y A+ +V + E+ L+ I +E+ E Sbjct: 10 PIVSEAEYEAAMSRYQVVKYAPAGTQEHREKMLLLLLIEEYEQKHDSLPEL--------D 61 Query: 80 GIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I +I+ M+ GL + L E+ G + VS+VL+ K+ L+L +K + I L + Sbjct: 62 PIELIKFRMEDLGLKAAALAEVYGDRGTVSKVLNYKQPLSLSMIRKFSELLKIPAELLL 120 >UniRef50_C1ZHD0 Predicted transcription regulator containing HTH domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHD0_PLALI Length = 143 Score = 64.6 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 14/122 (11%) Query: 21 LAGIQNEEQYTQALELVDHLL----LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 LA I+++ +A +++D LL LN+ E LD + + +E+ A Sbjct: 26 LASIRSDAHLVEAQKVIDGLLARERLNEGEATYLDALSDLVETYEDEHHAIAPA------ 79 Query: 77 MPGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 +++ L++ GL+ + L E G +S +S VL GKR+ + + KLA F I A Sbjct: 80 --TDADLLQQLLEAKGLSQAQLSREAGLPRSTISEVLKGKRRFSRQMIHKLAAYFQIDAA 137 Query: 135 LF 136 + Sbjct: 138 VL 139 >UniRef50_A7M640 Putative uncharacterized protein n=6 Tax=Bacteroides RepID=A7M640_BACOV Length = 127 Score = 61.5 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%) Query: 21 LAGIQNEEQYTQALELVDHLL--------LNDPENPLLDLVCAKITAWEESAPEFAEFNA 72 + I+N+ QY A++ V+ LL LNDP + L+L+ + + E E Sbjct: 7 MTKIENQNQYEWAVKRVEDLLPLVKDDTPLNDPNSIELELLSNLVADYSEEHFSLGE--- 63 Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 P + V++ M + GL L ++ S S +S +SGK + TL+ A++++ + Sbjct: 64 -----PSLVDVLKLRMYEMGLNQKSLSQLIGVSPSRLSDYISGKCEPTLKVAREISKKLN 118 Query: 131 ISPALFI 137 I ++ + Sbjct: 119 IDASIVL 125 >UniRef50_A8YBB5 Similar to tr|Q6YRQ3|Q6YRQ3 n=2 Tax=Microcystis aeruginosa RepID=A8YBB5_MICAE Length = 105 Score = 61.5 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 9/103 (8%) Query: 36 LVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTL 95 L+D L E L+++ + I +EE+ + GI +++ ++++ L Sbjct: 9 LLDKPQLTTEEREYLNVLGSLIYEYEENQEPIPDIY--------GIELLKFILEERNLQK 60 Query: 96 SDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 DL I SKS + + G ++LT + +KLA ISP LF Sbjct: 61 QDLLSIFESKSTLDDIFDGLQELTPIYIQKLANFLNISPDLFF 103 >UniRef50_B4WWD2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WWD2_9SYNE Length = 114 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Query: 50 LDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVS 108 LD + +I+ + + G+ ++ L+++ L DL +I +++ S Sbjct: 25 LDRMTRQISKQRTMHSLQPRSHNSMPDI-YGVVALKALIEENDLRRRDLSDIFETRANCS 83 Query: 109 RVLSGKRKLTLEHAKKLATRFGISPALFI 137 VL+G++ LT+++ +K+ RF ISP +F Sbjct: 84 EVLAGRQPLTIQNVQKICDRFHISPLVFF 112 >UniRef50_C6VXL2 Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXL2_DYAFD Length = 121 Score = 59.6 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 11/121 (9%) Query: 24 IQNEEQYTQALELVDHLLL------NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I++E++Y ALE V+ L+ +D E ++ + I A+E+ F M +++ Sbjct: 4 IKSEKEYEDALEEVNTLMKKGDDLISDEEADRVEELALAIQAYEDVHYPF----PMPKSI 59 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 P + R ++ L++L +G K+ +S++L G+R + K + + GI P + + Sbjct: 60 PELVESKRFELNLSIAGLAELLGLG-KTKLSKILRGQRDPDIPFLKAVYHKLGIDPGVLL 118 Query: 138 D 138 D Sbjct: 119 D 119 >UniRef50_B2J9X9 Putative uncharacterized protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J9X9_NOSP7 Length = 131 Score = 59.2 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 10/113 (8%) Query: 25 QNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVI 84 +NE+ AL L L E LL L+ I +EE+ +++ Sbjct: 27 ENEQAIALALTLEHRLNRTSEEEMLLQLLVTLIEQFEETHYPIL--------NGTPNSML 78 Query: 85 RTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 LMD +T L E+ GS + ++++G ++ A+ LA F ++ +LF Sbjct: 79 VHLMDARDMTTEALAEVLGSLEVALQIVNGG-TISKTQAEALADYFNVNVSLF 130 >UniRef50_B3CGY1 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CGY1_9BACE Length = 128 Score = 59.2 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 8/124 (6%) Query: 23 GIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKIT-AWEESAPEFAEFNAMAQAMPGGI 81 I+ E+++ ++ ++ ++L+ + + + +E+ A +PG + Sbjct: 2 KIKTEKEFRAYQAEMESIITKGTSLGDMELLSEEDKTKYIALSQAISEWEAAYHPLPGRV 61 Query: 82 A-----VIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 + IR M+ L + + S+S VS +L+G+R L L K+L GI Sbjct: 62 STLIIDAIRAKMEANNLKQKETAKCLGISESRVSDILNGRRSLNLNIVKRLRDNLGIPAD 121 Query: 135 LFID 138 +D Sbjct: 122 FILD 125 >UniRef50_UPI00019686DF hypothetical protein BACCELL_00041 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019686DF Length = 141 Score = 58.8 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 8/126 (6%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAK-ITAWEESAPEFAEFNAMAQAMPG 79 + I ++ QY + + ++ L+ + ++L+ + E+ A +PG Sbjct: 14 IMKISSDSQYREYKKEMEVLIQKGTKLGDMELLSEADKEEFVRLTDAIYEWEAAYHPLPG 73 Query: 80 GIA-----VIRTLMDQYGLTLSDL-PEIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 ++ I+ M + D ++G S+S VS +LSG+R L L K+L FGIS Sbjct: 74 KVSTVITDAIKQRMSIGNIKQKDAAKKLGVSESRVSELLSGRRSLNLNMVKRLRDNFGIS 133 Query: 133 PALFID 138 +D Sbjct: 134 ADFILD 139 >UniRef50_UPI00016C502D hypothetical protein GobsU_17351 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C502D Length = 145 Score = 58.5 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 14/129 (10%) Query: 14 LTAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEF 70 L P L ++ + AL ++D LL ++ L + A + A+E E Sbjct: 16 LVRQFPLLCP-TSDSELDAALMVIDDLLTQELDEGGEAYLSALTALVHAYE------REH 68 Query: 71 NAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATR 128 +A+ A P V+R L+ LT ++L + S VS ++SGKR+ T E LA Sbjct: 69 HAIPGATPA--EVLRELVSANDLTATELAKRAGIALSTVSALMSGKRRPTPEQMASLAGI 126 Query: 129 FGISPALFI 137 F + P +F+ Sbjct: 127 FKVHPGVFL 135 >UniRef50_B9YPT4 Putative transcription regulator with HTH domain n=1 Tax='Nostoc azollae' 0708 RepID=B9YPT4_ANAAZ Length = 83 Score = 58.1 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Query: 45 PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGS 103 + +L L+ +E+ A+++ LM+ G+ + L I S Sbjct: 10 EQTAILQLLVTLTEEFEK---------NYPMETSSPYAIVQHLMEGRGIKQAQLVGIISS 60 Query: 104 KSMVSRVLSGKRKLTLEHAKKLA 126 K + S V++GKR ++ AK L Sbjct: 61 KGVASEVVNGKRAISKAQAKALG 83 >UniRef50_B4SAF3 Helix-turn-helix domain protein n=2 Tax=Chlorobium/Pelodictyon group RepID=B4SAF3_PELPB Length = 126 Score = 55.4 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 9/124 (7%) Query: 23 GIQNEEQYTQALELVDHLL------LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 I ++ QY +AL ++ + N + + + I +E+ + + Sbjct: 2 KIVSKAQYEKALREIESFMNAFSDGENATNDAKITELAKAIEDYEDRHVVMPMPLVIKKP 61 Query: 77 MPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 VI M + + D+ ++ S + +S V+ GKRK+ +E AK+L G+ P Sbjct: 62 ETLP-DVIELKMFEKKMKRKDMAKLLGISDTRLSEVMHGKRKVNMELAKRLYKTLGVDPK 120 Query: 135 LFID 138 ++ Sbjct: 121 FILE 124 >UniRef50_A6W328 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W328_MARMS Length = 99 Score = 53.4 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLL-DLVCAKITA 59 M+ +I Q + + P L GI + +++ QAL L++ LL + EN ++ + + IT Sbjct: 1 MLVTNEITQMAKAIVTQFPILNGISSIDEHQQALILLEDLLEHYDENLIIIEALSNVITR 60 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQ 90 +E+ A EF +FN A+ A + L+DQ Sbjct: 61 YEDGAAEFDDFNKRQTAINLTTATLTVLIDQ 91 >UniRef50_A8ZNL0 Transcriptional regulator containing helix turn helix domain n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZNL0_ACAM1 Length = 109 Score = 53.4 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 14/97 (14%) Query: 22 AGIQNEEQYTQALELVDHLLL-----NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 I N+ Q A +D L+ E+ LD++ + +E++ + N Sbjct: 21 RPIHNDSQLQAAQNRIDALIDLERELTSDESDYLDILGTLVWEYEQTLEPIPDIN----- 75 Query: 77 MPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLS 112 G+ +++ L+++ GL DL P ++S+VS V Sbjct: 76 ---GVELLKVLVEERGLRQKDLVPIFKAESIVSDVFK 109 >UniRef50_A8YMN1 Genome sequencing data, contig C327 n=2 Tax=Microcystis aeruginosa RepID=A8YMN1_MICAE Length = 131 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 L I E + + + + L + + + + S E E + Sbjct: 18 LKAITTEVENERVIAIAQELEHRSELSLEEEALLELLI----SLIERFEADNYPIPDRNP 73 Query: 81 IAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +A +R L++ + +L I GS V ++++G+R + A+ L F + +LF Sbjct: 74 LATLRHLIEANEIEYPELITILGSPDAVEQIINGQRSINQSEARSLGAYFRVDASLF 130 >UniRef50_B5W819 Transcription regulator containing HTH domain-like protein n=2 Tax=Arthrospira RepID=B5W819_SPIMA Length = 100 Score = 51.9 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 11/76 (14%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+ E Y +AL V+ L N + L+++ A I +EE + Sbjct: 3 LKPIKTEADYREALAEVERLFDAPINTDDGDRLEVLTALIEVYEEQH--------HPIEL 54 Query: 78 PGGIAVIRTLMDQYGL 93 P I ++ L Sbjct: 55 PSPYEAILYYLESRQL 70 >UniRef50_A7LWN9 Putative uncharacterized protein n=4 Tax=Bacteroides RepID=A7LWN9_BACOV Length = 120 Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 18/122 (14%) Query: 26 NEEQYTQALELVDHLL----LNDPENP----LLDLVCAKITAWEESAPEFAEFNAMAQAM 77 +EQY AL V+ LL + P N L ++ + A+E+ Sbjct: 5 TKEQYEFALARVEELLPLVDDSTPANDKSMVELSVMSDIVIAYEKEHFPI--------EK 56 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 P +I +++ G+T L EIG S S V+ +SG+ + TL+ A+ L I PA Sbjct: 57 PTVAELIELSLEEKGMTQKQLASEIGVSPSRVNDYISGRSEPTLKIARLLCRVLNIHPAA 116 Query: 136 FI 137 + Sbjct: 117 ML 118 >UniRef50_A3NFB8 Helix-turn-helix domain protein n=5 Tax=Proteobacteria RepID=A3NFB8_BURP6 Length = 334 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 93 LTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + +DL P G++S VS VLS KR LT++ + L+ GIS + Sbjct: 1 MRQADLVPYFGTRSRVSEVLSRKRPLTVQMIRALSVGLGISAETLV 46 >UniRef50_Q01S53 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01S53_SOLUE Length = 116 Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 14/121 (11%) Query: 24 IQNEEQYTQALELVDHLLLND-----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I++++Q+ ++ + +L+ E L L+ +I + M Sbjct: 2 IEDDKQFDGIMKRLSYLIGKGRSRTPDETKLYKLLDLRIEDYNPK-------YGMPPDSV 54 Query: 79 GGIAVIRTLMDQYGLTLSDL--PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 ++ L+D ++L P G + V L+GKR ++ A+KL + LF Sbjct: 55 TRDEALQFLLDHSEKPANELLAPVFGQRRHVHEALTGKRPISAAPARKLGQILRVKSGLF 114 Query: 137 I 137 + Sbjct: 115 V 115 >UniRef50_A3IXK8 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IXK8_9CHRO Length = 96 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 11/92 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+NE Y +AL+ ++ L N PE L+++ + +E+ Sbjct: 3 IKPIKNETDYQEALQEIEALFDASINTPEGQKLEILTTLVEVYEQQ--------YYPIEP 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSR 109 P I I ++ +S L E + VS Sbjct: 55 PSPIEAILYHLESRYSDVSVLIEGLKRRGVSE 86 >UniRef50_D2MK09 Putative uncharacterized protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MK09_9BACT Length = 73 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEF 67 + ++ E Y AL +D L+ P E+ LD++ + +E Sbjct: 4 IKPVRTEADYQAALARIDELMDAKPGSREDDELDVLADLVELYETKHEPM 53 >UniRef50_Q07XK7 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07XK7_SHEFN Length = 107 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 2 IAIADILQAGEKLTAVAPFLA-GIQNEEQYTQALELVDHLLLNDPEN--PLLDLVCAKIT 58 + I I ++L PF GI ++Y AL + D L + ++ LLD++ I Sbjct: 1 MDIKKIKFLAKELQNALPFGREGIVTPKEYAHALAIADELTDDYKDSYAILLDVLWPPIQ 60 Query: 59 AWEESAPEFAEFN-----AMAQAMPGGIAVIRTLMDQ 90 +E +APEF EFN + A+ + +I++ ++Q Sbjct: 61 RYEGTAPEFIEFNERFARSEAENKKRQVELIKSRLNQ 97 >UniRef50_A9ING0 Hypothetical prophage protein n=2 Tax=Bartonella RepID=A9ING0_BART1 Length = 59 Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 21 LAGIQNEEQYTQALELVDHLLLN-----DPENPLLDLVCAKITAWEESAPEFAEFNA 72 + I+ E+ Y +ALE+V + N PE + + I A+E + +A Sbjct: 3 IKPIRTEQDYQEALEIVSAMFDNQPQEGTPEFDQMKTLVLLIEAYEAEHYPVSPTHA 59 >UniRef50_Q4C6I0 Putative uncharacterized protein n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C6I0_CROWT Length = 93 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 45 PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI-GS 103 + L ++ I +EE++ + G+ +++ L+++ L+ EI S Sbjct: 12 EDREYLRVLGMLIYEYEENSEPIPKLE--------GVELLKALIEEDNLSPQYFLEIFDS 63 Query: 104 KSMVSRVLSGKRKLTLEHAKKLATR 128 + +V VL GKRK+TL AKKL Sbjct: 64 EKVVLDVLQGKRKITLSEAKKLMNF 88 >UniRef50_B2UDQ1 Plasmid maintenance system antidote protein, XRE family n=6 Tax=Proteobacteria RepID=B2UDQ1_RALPJ Length = 376 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 + + ++ ++ G T ++ EI +VS V+SGKR +T E A L G Sbjct: 5 IPAEVFPPGEFLKDELEARGWTQAEFAEIIGKDARLVSEVISGKRSITPETAIALGAALG 64 Query: 131 ISPALFID 138 SP L+++ Sbjct: 65 SSPELWMN 72 >UniRef50_Q2LU14 Transcriptional regulator, Cro/CI family n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU14_SYNAS Length = 128 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 69 EFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI---GSKSMVSRVLSGKRKLTLEHAKKL 125 + + R + G T L E+ + +S + GKR ++ A+KL Sbjct: 51 PWYKDLKEKTTPGDTTRIYREAKGWTQEKLGELLGDIPRQHISNMEHGKRPISSNTARKL 110 Query: 126 ATRFGISPALFI 137 A F + FI Sbjct: 111 AKLFNVPMDRFI 122 >UniRef50_Q2LSU9 Transcriptional regulator helix turn helix n=10 Tax=Deltaproteobacteria RepID=Q2LSU9_SYNAS Length = 117 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 62 ESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTL 119 + + E + + +R L + LT L E IG + +S + +GKR + Sbjct: 40 SESVPWREAFPEYEDKDLPVVCLRALRAKENLTQKQLAELIGIPQRHISEMENGKRPIGK 99 Query: 120 EHAKKLATRFGISPALFI 137 E AK+L + +F+ Sbjct: 100 EMAKRLGKALNVGYKVFL 117 >UniRef50_C4GIW1 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW1_9NEIS Length = 67 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 16 AVAPFLAGIQNEEQYTQALELVDHLLLNDPE------NPLLDLVCAKITAWEESAPEFAE 69 A P L I+NE +Y AL ++ ++P+ + + + A + +E + + Sbjct: 6 ATMPPLKPIRNEAEYRAALAVLSRFFDSNPDAASQESSDYHEALAALVEQYEAAHYPIND 65 Query: 70 FN 71 Sbjct: 66 RP 67 >UniRef50_B8JHN9 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Proteobacteria RepID=B8JHN9_ANAD2 Length = 383 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 79 GGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 ++ L+++ T + L + +K+ +S++++GKR L +E A +LA F + F Sbjct: 6 TPGQLLAELLEERSWTQNVLSVVLGINKATISQIVAGKRDLDVELALRLAEIFDVPVQQF 65 Query: 137 ID 138 +D Sbjct: 66 MD 67 >UniRef50_A4ESN9 Possible transcriptional regulator, XRE family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESN9_9RHOB Length = 161 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 81 IAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + +R + GLT SD+ E +G KS+VSR+L+GK LTL+ +++ G+ P L Sbjct: 54 VRAVREAKESRGLTQSDIAESMGVDKSVVSRILNGKGNLTLQTIGEISWVLGLRPDLVF 112 >UniRef50_A8GXR6 Putative transcriptional regulator n=2 Tax=Rickettsia bellii RepID=A8GXR6_RICB8 Length = 71 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 103 SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +S VS +L+ KR LTL +KL I + I Sbjct: 29 PRSRVSEILNKKRTLTLPMIRKLHKELHIPADILIQ 64 >UniRef50_B4SEV6 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SEV6_PELPB Length = 128 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query: 66 EFAEFNAMAQ----AMPGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTL 119 +F + N M A GI +++ ++ GL+ L IG ++ ++ GKR ++ Sbjct: 26 QFLQKNNMIPSNRVATHPGIILLKEFIEPLGLSQKALSAHIGIPVQRINEIVCGKRGVSP 85 Query: 120 EHAKKLATRFGISPALFID 138 A LA F SP +++ Sbjct: 86 NTAWLLAGAFNTSPEFWLN 104 >UniRef50_B1YM75 Helix-turn-helix domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YM75_EXIS2 Length = 294 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 78 PGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P +R L ++ LT DL I S++ +S++ SG T++ L+ R + F Sbjct: 7 PQIGLALRRLRKKHNLTQKDLANGICSQAEISKIESGTHSPTVDLLYALSRRLQVPINTF 66 Query: 137 ID 138 +D Sbjct: 67 LD 68 >UniRef50_B0JI99 Putative uncharacterized protein n=5 Tax=Cyanobacteria RepID=B0JI99_MICAN Length = 73 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCA 55 + D+ + + T + P L ++E +Y Q + ++D+L+ N P L++++ Sbjct: 1 MPTIDLEKTRQAWTNLKPILFIPRSESEYEQLVIMLDNLIDEIGENENHPLASLMEILGI 60 Query: 56 KITAWEESAPE 66 I +E+ Sbjct: 61 LIENYEQENVP 71 >UniRef50_B4D5K7 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Bacteria RepID=B4D5K7_9BACT Length = 100 Score = 41.1 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 79 GGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 G +++ M GLT + L +G + V+ ++ GKR +TL + +L FG SP + Sbjct: 10 PGEILLQEYMKPMGLTQNALARALGVAPRRVNEIIHGKRAITLNTSLRLGRYFGQSPRFW 69 Query: 137 ID 138 ++ Sbjct: 70 LN 71 >UniRef50_Q47NX3 Helix-turn-helix motif n=2 Tax=Nocardiopsaceae RepID=Q47NX3_THEFY Length = 444 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%) Query: 91 YGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 G + +DL +G S+S VSRV++G++ LTL+ +++ R GI Sbjct: 40 RGWSQTDLARTVGYSQSWVSRVVNGQQSLTLDQVREVCERLGIP 83 >UniRef50_Q2BCU9 Helix-turn-helix domain protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BCU9_9BACI Length = 212 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 83 VIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +++ L+ + L++ L ++ +++S++++GKRK T EH ++ A + + + Sbjct: 11 LLKGLLKERSLSMRKLGQLAGIDPAVISKIVNGKRKATPEHLQRFAEHLNVPISRLYE 68 >UniRef50_B0BGE4 Putative integron gene cassette protein n=2 Tax=Bacteria RepID=B0BGE4_9BACT Length = 128 Score = 40.7 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 2/77 (2%) Query: 64 APEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEH 121 + F G ++ + LT DL IG V+ ++ GKR +T E Sbjct: 47 SWRFEMIPKSRIPTHPGEILLEEFLKPLNLTQVDLAAHIGVPVQRVNEIVRGKRGITPET 106 Query: 122 AKKLATRFGISPALFID 138 A + FG +P +I+ Sbjct: 107 AWLFSQAFGTTPEFWIN 123 >UniRef50_A1VX48 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VX48_POLNA Length = 138 Score = 40.3 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEE 62 + IQNE Y AL++V L+ DP E L+ + + A+E Sbjct: 3 MHSIQNEADYKAALKIVSALVDVDPQRGTLEADRLEALGFLVEAYES 49 >UniRef50_D1A8A8 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8A8_THECD Length = 433 Score = 40.0 bits (92), Expect = 0.022, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKK 124 FA A A ++ + +G T SDL +G S+S VS+V+ + LT++ ++ Sbjct: 16 FAPAVVNALANCDIPVLLEEIRRAHGWTQSDLAAAVGYSQSWVSKVIRRAQPLTIDQVRE 75 Query: 125 LATRFGISPALF 136 +A R GI L Sbjct: 76 IARRLGIPAGLL 87 >UniRef50_B7DVG5 Transposase IS3/IS911 family protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DVG5_9BACL Length = 201 Score = 40.0 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 82 AVIRTLMDQYGLTLSDLPEIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++R L ++ LT +DL G S +++S SG+R T E LA R ++ +F Sbjct: 8 EILRRLREERNLTQADLAGNGISWALISLYESGRRTPTYETLAYLAERLQVAVDIFF 64 >UniRef50_A3XID6 Virulence-associated protein n=2 Tax=Bacteroidetes RepID=A3XID6_9FLAO Length = 170 Score = 39.6 bits (91), Expect = 0.030, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 AV++ + + G T SDL K +S +L+G+R + + + KL F + P F+ Sbjct: 13 PGAVLKRALKKRGTTASDLARTIDEHKQTISAILNGRRAINAKLSIKLGDVFSVQPDYFM 72 >UniRef50_UPI0001A42E87 hypothetical protein PcarcW_20908 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A42E87 Length = 99 Score = 39.6 bits (91), Expect = 0.030, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 P V+R ++ +T + S+S +SR+L+G +T + A +L Sbjct: 2 HIFNPPHPGEVLRDYIEGVSITQAAFALQISRSRLSRILNGHAPITADMALRLGALVNTR 61 Query: 133 PALFID 138 ++ D Sbjct: 62 AEMWAD 67 >UniRef50_D2L5C8 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5C8_9DELT Length = 118 Score = 39.6 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 24/35 (68%) Query: 103 SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 SK++VS + G+R ++ + A KLA FG SP +F+ Sbjct: 83 SKTVVSDLEHGRRPISRKMAGKLAEVFGSSPLVFL 117 >UniRef50_C0QEV8 Putative plasmid maintenance system antidote protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEV8_DESAH Length = 87 Score = 39.2 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 91 YGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 G++ + L + + +S+++ GKR+++ + A +L FGI P +++ Sbjct: 1 MGISQNQLAKDINVPANRISQIIHGKREISADTALRLGKYFGIEPEFWLN 50 >UniRef50_D1BQ02 Plasmid maintenance system antidote protein, XRE family n=4 Tax=Firmicutes RepID=D1BQ02_VEIPT Length = 106 Score = 39.2 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 76 AMPGGIAVIRT-LMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 P +++ MD GL+ L + S + +L+G R ++ + + +LA FG+S Sbjct: 6 PTPTISEILKEEFMDPLGLSAYRLAKDIHVPVSRIQEILNGTRSISADTSLRLAKYFGVS 65 Query: 133 PALFI 137 F+ Sbjct: 66 EGYFL 70 >UniRef50_C4YWS8 HTH_3 family transcriptional regulator protein n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YWS8_9RICK Length = 81 Score = 38.8 bits (89), Expect = 0.049, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 8/72 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 + I+ E++Y +AL+ +D+LL + + + + +E + P Sbjct: 3 INIIKTEKEYKEALKELDNLLYTKENSSKAEKLEILVEDYENKHYKIEA--------PDT 54 Query: 81 IAVIRTLMDQYG 92 I I +D Sbjct: 55 IEAINFRIDSLD 66 >UniRef50_Q0BVE8 Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BVE8_GRABC Length = 138 Score = 38.8 bits (89), Expect = 0.053, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 15/124 (12%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 I++E A + L+ N+P E+ +L + + + Sbjct: 13 FKPIRDEADLQAARVEMHRLMNNNPEPGSREHEMLGVWAILTGHY--------LASQADP 64 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 IA+IR M + + L I + +S +L L H + L + Sbjct: 65 KSTDPIALIRNAMAERSIPPRLLSAITRLPEEELSAILRKDIPLHTSHIEALCPALDLPL 124 Query: 134 ALFI 137 + Sbjct: 125 EALL 128 >UniRef50_A8F1A3 Plasmid maintenance system antidote protein n=5 Tax=spotted fever group RepID=A8F1A3_RICM5 Length = 120 Score = 38.8 bits (89), Expect = 0.055, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 75 QAMPGGIAVIRTLMDQYGLTLSDLP--EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 + G ++ M+ G++ S L + ++ ++ R +T + A +L F I+ Sbjct: 26 PPISPGQMLLAEFMEPMGISQSKLARDIDVPVTRINNIIKHHRSITADTALRLGKYFNIN 85 Query: 133 PALFID 138 P +++ Sbjct: 86 PRWWMN 91 >UniRef50_Q5KNN6 Expressed protein n=2 Tax=Filobasidiella neoformans RepID=Q5KNN6_CRYNE Length = 470 Score = 38.8 bits (89), Expect = 0.060, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 3/103 (2%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLL-DLVCAKITAWEESAPEFAEFNAMAQAMPG 79 + ++ E Q +A+ L L E L V +E E +A Sbjct: 165 IVRLREEAQKREAMHL--ELSKAHEEAERLRGKVKNLTEREDELKARVEELQRTVEANNK 222 Query: 80 GIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHA 122 ++ T M Q+ T DL E + ++ +L L+ H Sbjct: 223 KTEILDTAMQQHNSTKKDLTEALTCTVCFEILKDPYMLSCGHM 265 >UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PF89_CLOTS Length = 268 Score = 38.8 bits (89), Expect = 0.062, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 82 AVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 AV+R L ++ +T+ + E + V++ LSG+RK + K+LA F + +F Sbjct: 14 AVLRQLKERNNVTIHQIAEAVNVTDGAVAKYLSGERKPNKQVIKRLAEFFHVDQKVF 70 >UniRef50_C5M390 Predicted protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M390_CANTT Length = 871 Score = 38.4 bits (88), Expect = 0.065, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Query: 42 LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGL-----TLS 96 L++ EN ++ ++ +I+ ++ F + LMD++GL +S Sbjct: 414 LHEDENDMIHVLGTQISKFDNLRKLFICQLLTINEPSNPNFFVFKLMDEFGLDEMDQRVS 473 Query: 97 DLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRF 129 DL +I +V +L TL + + L +F Sbjct: 474 DLSDIPRLQLVYDILLDHNS-TLTNIEGLFEKF 505 >UniRef50_Q5E5S6 Putative uncharacterized protein n=1 Tax=Vibrio fischeri ES114 RepID=Q5E5S6_VIBF1 Length = 65 Score = 38.4 bits (88), Expect = 0.077, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP------ENPLLDLVCAKITAWEESAPEFAEFNAMA 74 + I+ E+ Y A+ + L +DP E L+++ A A+E + + + Sbjct: 4 IKPIRTEDDYKAAMARISELTSSDPDALLDNEFDELEVLTALAEAYENEYYKNEAPDPVI 63 >UniRef50_A5G5W2 Plasmid maintenance system antidote protein, XRE family n=4 Tax=Proteobacteria RepID=A5G5W2_GEOUR Length = 104 Score = 38.0 bits (87), Expect = 0.083, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFG 130 G + M YGLT++ L E +G S+ ++ +L +R LT A +L+ FG Sbjct: 10 ELPPTHPGAMLREDFMPGYGLTVTTLAETLGVSRQTINELLRERRALTPAMALRLSRLFG 69 Query: 131 ISPALFID 138 SP +++ Sbjct: 70 NSPEFWLN 77 >UniRef50_Q8YT04 Virulence-associated protein n=2 Tax=Nostocaceae RepID=Q8YT04_ANASP Length = 97 Score = 38.0 bits (87), Expect = 0.093, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 MA+ ++ + + +T SDL + K+ ++ +++G+R +T + A +L FG Sbjct: 1 MARPPIHPGEILADEITELAMTASDLARVLHVPKNRITEIINGRRGITADTALRLGQYFG 60 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P67702 Uncharacterized HTH-type transcriptional regulat... 153 1e-36 UniRef50_Q1NVE9 Helix-turn-helix motif n=6 Tax=Bacteria RepID=Q1... 142 3e-33 UniRef50_A4W5K3 Helix-turn-helix domain protein n=4 Tax=Enteroba... 140 1e-32 UniRef50_C7BKI9 Putative uncharacterized protein ygjM n=1 Tax=Ph... 137 1e-31 UniRef50_A7ZQE8 Helix-turn-helix DNA-binding domain protein n=27... 137 1e-31 UniRef50_B4SZX2 Sea41 n=35 Tax=Enterobacteriaceae RepID=B4SZX2_S... 133 2e-30 UniRef50_D0KFF0 Transcriptional regulator, XRE family n=10 Tax=B... 130 1e-29 UniRef50_Q6LGF7 Putative uncharacterized protein Z4435 n=2 Tax=V... 123 1e-27 UniRef50_Q5NYI4 Predicted transcription regulator containing hel... 123 2e-27 UniRef50_Q5NXR7 Putative uncharacterized protein n=1 Tax=Aromato... 122 3e-27 UniRef50_Q7MYT1 Similar to unknown protein n=1 Tax=Photorhabdus ... 122 4e-27 UniRef50_C8U4T6 Predicted DNA-binding transcriptional regulator ... 120 1e-26 UniRef50_Q3J707 Transcription regulator containing HTH domain-li... 120 2e-26 UniRef50_C1DP02 Transcritional regulatior protein n=23 Tax=Prote... 119 2e-26 UniRef50_D2MJP6 Transcriptional regulator n=1 Tax=Candidatus Por... 119 3e-26 UniRef50_D0YLK6 Transcriptional regulator, XRE family n=1 Tax=Kl... 118 6e-26 UniRef50_C4XM13 Xre family DNA-binding protein n=1 Tax=Desulfovi... 116 2e-25 UniRef50_A1AYN5 Transcriptional regulator, XRE family n=4 Tax=Al... 115 4e-25 UniRef50_D0SQN2 Helix-turn-helix domain-containing protein n=6 T... 115 5e-25 UniRef50_Q21CT0 Transcriptional regulator n=14 Tax=Proteobacteri... 115 5e-25 UniRef50_B0SBN1 Transcription regulator containing HTH domain n=... 112 4e-24 UniRef50_A7BUA0 Transcriptional regulator protein n=1 Tax=Beggia... 111 9e-24 UniRef50_B0SI61 Transcription regulator n=6 Tax=Bacteria RepID=B... 111 1e-23 UniRef50_A7BUG0 Transcriptional regulator n=2 Tax=Bacteria RepID... 109 3e-23 UniRef50_C6NZN3 Putative transcription regulator with HTH domain... 109 3e-23 UniRef50_A1RER9 Putative DNA-binding protein n=2 Tax=Shewanella ... 109 4e-23 UniRef50_C8TPW7 Probable transcriptional regulator n=3 Tax=root ... 108 5e-23 UniRef50_Q4KCW1 Putative uncharacterized protein n=1 Tax=Pseudom... 108 6e-23 UniRef50_B3PVM1 Putative transcriptional regulator protein n=1 T... 107 9e-23 UniRef50_Q1GIG8 Transcriptional regulator, XRE family n=3 Tax=Al... 107 1e-22 UniRef50_B1FYI7 Helix-turn-helix domain protein n=6 Tax=Burkhold... 107 1e-22 UniRef50_C4KD79 Putative transcription regulator with HTH domain... 107 1e-22 UniRef50_D2L5E8 Transcriptional regulator, XRE family n=1 Tax=De... 105 4e-22 UniRef50_Q1VUA7 Helix-turn-helix motif n=2 Tax=Psychroflexus tor... 105 4e-22 UniRef50_Q8YMS4 All4855 protein n=4 Tax=Bacteria RepID=Q8YMS4_ANASP 104 1e-21 UniRef50_A1W8N9 Helix-turn-helix domain protein n=1 Tax=Acidovor... 103 1e-21 UniRef50_B0T536 Helix-turn-helix domain protein n=1 Tax=Caulobac... 103 1e-21 UniRef50_A3JBK0 Plasmid-related protein n=2 Tax=Alteromonadales ... 103 2e-21 UniRef50_Q20YM0 Transcriptional regulator, XRE family n=8 Tax=Pr... 102 4e-21 UniRef50_B0C5K8 HTH transcriptional regulator n=4 Tax=Cyanobacte... 101 5e-21 UniRef50_B4WNC3 Putative uncharacterized protein n=1 Tax=Synecho... 101 5e-21 UniRef50_B7L3P4 Putative uncharacterized protein n=1 Tax=Methylo... 101 5e-21 UniRef50_B3SED7 Putative uncharacterized protein n=1 Tax=Trichop... 101 1e-20 UniRef50_C0GLZ8 Putative transcription regulator with HTH domain... 100 1e-20 UniRef50_B6J222 Transcriptional regulator n=3 Tax=Coxiella burne... 100 1e-20 UniRef50_Q2RRG3 Transcription regulator containing helix turn he... 99 3e-20 UniRef50_A3XES4 Putative uncharacterized protein n=1 Tax=Roseoba... 99 3e-20 UniRef50_Q01YH3 Putative uncharacterized protein n=1 Tax=Candida... 99 4e-20 UniRef50_B3KLY3 Possible transcriptional regulator n=2 Tax=Sinor... 99 4e-20 UniRef50_B6IV89 DNA-binding protein, putative n=1 Tax=Rhodospiri... 99 5e-20 UniRef50_D2QDY8 Putative transcription regulator with HTH domain... 98 1e-19 UniRef50_B2VFH6 Predicted transcription regulator containing HTH... 97 2e-19 UniRef50_Q6YRQ3 Slr6101 protein n=3 Tax=Chroococcales RepID=Q6YR... 96 3e-19 UniRef50_C7QXE5 Transcriptional regulator, XRE family n=5 Tax=Ch... 96 4e-19 UniRef50_Q88R60 Helix-turn-helix domain protein n=2 Tax=Pseudomo... 95 5e-19 UniRef50_Q3SMY3 Transcriptional regulator, XRE family n=1 Tax=Ni... 95 8e-19 UniRef50_B4WWD1 Putative uncharacterized protein n=1 Tax=Synecho... 95 9e-19 UniRef50_C6W2R3 Transcriptional regulator, XRE family n=1 Tax=Dy... 92 6e-18 UniRef50_D2QV84 Transcriptional regulator, XRE family n=1 Tax=Sp... 89 5e-17 UniRef50_B2J1Y0 Transcription regulator containing HTH domain-li... 88 1e-16 UniRef50_B7K211 Putative transcription regulator with HTH domain... 85 5e-16 UniRef50_B7KKN6 Putative transcription regulator with HTH domain... 85 9e-16 UniRef50_B3CGY1 Putative uncharacterized protein n=1 Tax=Bactero... 85 9e-16 UniRef50_UPI00019686DF hypothetical protein BACCELL_00041 n=1 Ta... 85 1e-15 UniRef50_C6VVJ1 Transcriptional regulator, XRE family n=2 Tax=Dy... 83 2e-15 UniRef50_A7M640 Putative uncharacterized protein n=6 Tax=Bactero... 83 2e-15 UniRef50_UPI00016C502D hypothetical protein GobsU_17351 n=1 Tax=... 83 3e-15 UniRef50_A7BR65 Putative uncharacterized protein n=1 Tax=Beggiat... 83 3e-15 UniRef50_A9M4N9 Putative uncharacterized protein n=1 Tax=Vibrio ... 82 6e-15 UniRef50_C6VXL2 Transcriptional regulator, XRE family n=1 Tax=Dy... 82 6e-15 UniRef50_A8YMC7 Similar to tr|Q6YRQ3|Q6YRQ3 n=4 Tax=Cyanobacteri... 81 1e-14 UniRef50_C1ZHD0 Predicted transcription regulator containing HTH... 80 3e-14 UniRef50_A8YNZ8 Similar to tr|Q8YMS4|Q8YMS4 n=3 Tax=Chroococcale... 79 4e-14 UniRef50_C6W022 Transcriptional regulator, XRE family n=1 Tax=Dy... 78 7e-14 UniRef50_B4SAF3 Helix-turn-helix domain protein n=2 Tax=Chlorobi... 77 1e-13 UniRef50_B4B4A9 Transcription regulator containing HTH domain-li... 76 3e-13 UniRef50_A7LWN9 Putative uncharacterized protein n=4 Tax=Bactero... 73 3e-12 UniRef50_Q01S53 Putative uncharacterized protein n=1 Tax=Candida... 72 4e-12 UniRef50_B2J9X9 Putative uncharacterized protein n=1 Tax=Nostoc ... 72 5e-12 UniRef50_B4WWD2 Putative uncharacterized protein n=1 Tax=Synecho... 72 6e-12 UniRef50_A8YBB5 Similar to tr|Q6YRQ3|Q6YRQ3 n=2 Tax=Microcystis ... 72 9e-12 UniRef50_A8ZNL0 Transcriptional regulator containing helix turn ... 68 9e-11 UniRef50_A8YMN1 Genome sequencing data, contig C327 n=2 Tax=Micr... 68 1e-10 UniRef50_A3IXK8 Putative uncharacterized protein n=1 Tax=Cyanoth... 66 4e-10 UniRef50_B5W819 Transcription regulator containing HTH domain-li... 65 5e-10 UniRef50_B9YPT4 Putative transcription regulator with HTH domain... 63 2e-09 UniRef50_B2UDQ1 Plasmid maintenance system antidote protein, XRE... 62 9e-09 UniRef50_C1DNZ8 Putative uncharacterized protein n=1 Tax=Azotoba... 61 9e-09 UniRef50_A6W328 Putative uncharacterized protein n=1 Tax=Marinom... 61 1e-08 UniRef50_Q4C6I0 Putative uncharacterized protein n=1 Tax=Crocosp... 58 9e-08 UniRef50_A3NFB8 Helix-turn-helix domain protein n=5 Tax=Proteoba... 58 1e-07 UniRef50_D2MK09 Putative uncharacterized protein n=1 Tax=Candida... 57 2e-07 UniRef50_Q07XK7 Putative uncharacterized protein n=1 Tax=Shewane... 55 8e-07 UniRef50_A9ING0 Hypothetical prophage protein n=2 Tax=Bartonella... 54 2e-06 Sequences not found previously or not previously below threshold: UniRef50_D1PBN6 Toxin-antitoxin system, antitoxin component, Xre... 70 2e-11 UniRef50_C4GIW1 Putative uncharacterized protein n=1 Tax=Kingell... 55 5e-07 UniRef50_C8SJW8 Plasmid maintenance system antidote protein, XRE... 51 1e-05 UniRef50_Q2LSU9 Transcriptional regulator helix turn helix n=10 ... 50 2e-05 UniRef50_B8JHN9 Plasmid maintenance system antidote protein, XRE... 50 3e-05 UniRef50_Q2LU14 Transcriptional regulator, Cro/CI family n=1 Tax... 50 3e-05 UniRef50_C5VKZ3 Addiction module antidote protein, HigA family n... 49 4e-05 UniRef50_Q47NX3 Helix-turn-helix motif n=2 Tax=Nocardiopsaceae R... 49 5e-05 UniRef50_C2BM45 XRE family plasmid maintenance system antidote p... 49 6e-05 UniRef50_D1A8A8 Transcriptional regulator, XRE family n=1 Tax=Th... 48 6e-05 UniRef50_B8CZR2 Plasmid maintenance system antidote protein, XRE... 47 1e-04 UniRef50_A8GXR6 Putative transcriptional regulator n=2 Tax=Ricke... 47 1e-04 UniRef50_Q0BVE8 Putative uncharacterized protein n=1 Tax=Granuli... 46 3e-04 UniRef50_Q8YT04 Virulence-associated protein n=2 Tax=Nostocaceae... 46 3e-04 UniRef50_A1VX48 Putative uncharacterized protein n=1 Tax=Polarom... 46 3e-04 UniRef50_C2KPK0 XRE family plasmid maintenance system antidote p... 46 4e-04 UniRef50_Q3JDK5 Transcriptional regulator, XRE family n=9 Tax=Ba... 46 4e-04 UniRef50_Q5E5S6 Putative uncharacterized protein n=1 Tax=Vibrio ... 46 5e-04 UniRef50_UPI0001A42E87 hypothetical protein PcarcW_20908 n=1 Tax... 45 6e-04 UniRef50_A4U4B9 Putative uncharacterized protein n=1 Tax=Magneto... 45 7e-04 UniRef50_Q3KGN2 Putative uncharacterized protein n=1 Tax=Pseudom... 45 7e-04 UniRef50_C4YWS8 HTH_3 family transcriptional regulator protein n... 45 8e-04 UniRef50_Q60C36 DNA-binding protein n=3 Tax=Bacteria RepID=Q60C3... 45 8e-04 UniRef50_B0JI99 Putative uncharacterized protein n=5 Tax=Cyanoba... 45 9e-04 UniRef50_B0BGE4 Putative integron gene cassette protein n=2 Tax=... 45 9e-04 UniRef50_C6P0T2 Plasmid maintenance system antidote protein, XRE... 45 0.001 UniRef50_A3XID6 Virulence-associated protein n=2 Tax=Bacteroidet... 45 0.001 UniRef50_C7M8C3 Putative uncharacterized protein n=1 Tax=Capnocy... 45 0.001 UniRef50_C2MAN9 Addiction module antidote protein, HigA family n... 44 0.001 UniRef50_B8HE38 Plasmid maintenance system antidote protein, XRE... 44 0.001 UniRef50_B4D5K7 Plasmid maintenance system antidote protein, XRE... 44 0.001 UniRef50_A9NH52 Addiction module antidote protein n=1 Tax=Achole... 44 0.002 UniRef50_Q93P69 Putative uncharacterized protein n=1 Tax=Microsc... 44 0.002 UniRef50_D1W2R6 DNA-binding protein n=2 Tax=Prevotella RepID=D1W... 44 0.002 UniRef50_A9L235 Putative uncharacterized protein n=1 Tax=Shewane... 43 0.002 UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Th... 43 0.002 UniRef50_C9P0V5 Putative uncharacterized protein n=2 Tax=Vibrion... 43 0.002 UniRef50_B0JSE6 Plasmid maintenance system antidote protein n=4 ... 43 0.002 UniRef50_Q4C0R2 Putative uncharacterized protein n=2 Tax=Chrooco... 43 0.002 UniRef50_B8HS69 Plasmid maintenance system antidote protein, XRE... 43 0.003 UniRef50_C1SMG1 Plasmid maintenance system antidote protein n=1 ... 43 0.003 UniRef50_C0QEV8 Putative plasmid maintenance system antidote pro... 43 0.003 UniRef50_A8ZWN6 Plasmid maintenance system antidote protein, XRE... 43 0.004 UniRef50_B4SCN5 Plasmid maintenance system antidote protein, XRE... 43 0.004 UniRef50_D1W3L4 Addiction module antidote protein, HigA family n... 43 0.004 UniRef50_Q46561 Virulence-associated protein A' n=5 Tax=Dichelob... 42 0.005 UniRef50_Q213Q9 Plasmid maintenance system antidote protein, XRE... 42 0.005 UniRef50_D2L5C8 Plasmid maintenance system antidote protein, XRE... 42 0.005 UniRef50_C3X7W1 Transcriptional regulator n=1 Tax=Oxalobacter fo... 42 0.005 UniRef50_Q2RP39 Plasmid maintenance system antidote protein n=1 ... 42 0.005 UniRef50_A4ESN9 Possible transcriptional regulator, XRE family p... 42 0.006 UniRef50_B1KUS7 Transcriptional regulator n=1 Tax=Clostridium bo... 42 0.007 UniRef50_Q1VXY8 Putative plasmid maintenance system antidote pro... 42 0.007 UniRef50_C6CIC0 Putative transcription regulator with HTH domain... 41 0.008 UniRef50_B8FJF9 Plasmid maintenance system antidote protein, XRE... 41 0.008 UniRef50_B1YHK9 Transcriptional regulator, XRE family n=1 Tax=Ex... 41 0.008 UniRef50_B7C7K4 Putative uncharacterized protein (Fragment) n=1 ... 41 0.009 UniRef50_C3Q3M0 Helix-turn-helix domain-containing protein n=5 T... 41 0.009 UniRef50_C6SQ36 Plasmid maintenance system antidote protein n=1 ... 41 0.009 UniRef50_C9L320 Toxin-antitoxin system, antitoxin component, Xre... 41 0.009 UniRef50_A7B981 Putative uncharacterized protein n=1 Tax=Actinom... 41 0.010 UniRef50_D2L592 Plasmid maintenance system antidote protein, XRE... 41 0.010 UniRef50_B4SEV6 Plasmid maintenance system antidote protein, XRE... 41 0.010 UniRef50_A5L1S4 Putative uncharacterized protein n=3 Tax=Vibrion... 41 0.011 UniRef50_Q2BCU9 Helix-turn-helix domain protein n=1 Tax=Bacillus... 41 0.011 UniRef50_B0JR11 Plasmid maintenance system antidote protein n=10... 41 0.012 UniRef50_UPI0001BCFAA1 putative plasmid maintenance system antid... 41 0.012 UniRef50_C7R1U5 Plasmid maintenance system antidote protein, XRE... 41 0.013 UniRef50_A1BHT8 Plasmid maintenance system antidote protein, XRE... 41 0.013 UniRef50_B1YM75 Helix-turn-helix domain protein n=1 Tax=Exiguoba... 41 0.014 UniRef50_Q2RPT2 Plasmid maintenance system antidote protein n=1 ... 41 0.014 UniRef50_C8VW53 Plasmid maintenance system antidote protein, XRE... 41 0.015 UniRef50_C6MLY0 Plasmid maintenance system antidote protein, XRE... 41 0.015 UniRef50_Q2BLI6 Plasmid maintenance system antidote protein, XRE... 41 0.015 UniRef50_A5UQA7 Putative uncharacterized protein n=6 Tax=Bacteri... 41 0.016 UniRef50_B2VB72 Putative uncharacterized protein n=2 Tax=Gammapr... 41 0.016 UniRef50_B4AH10 Conserved membrane protein YkvA n=2 Tax=Bacillus... 40 0.017 UniRef50_C8NS57 HigA family addiction module antidote protein n=... 40 0.018 UniRef50_C8WNM3 Plasmid maintenance system antidote protein, XRE... 40 0.022 UniRef50_Q07I76 Plasmid maintenance system antidote protein, XRE... 40 0.022 UniRef50_B4TEJ2 Plasmid maintenance system antidote protein, XRE... 40 0.025 UniRef50_C6XEC2 Putative phage repressor n=1 Tax=Methylovorus sp... 40 0.026 UniRef50_C4XT67 Xre family DNA-binding protein n=1 Tax=Desulfovi... 40 0.027 UniRef50_A5G5W2 Plasmid maintenance system antidote protein, XRE... 40 0.030 UniRef50_C4FMN1 Putative uncharacterized protein n=1 Tax=Veillon... 40 0.030 UniRef50_C6LFA5 Addiction module antidote protein, HigA family n... 40 0.031 UniRef50_B3Q7W2 Plasmid maintenance system antidote protein, XRE... 40 0.033 UniRef50_C9RP82 Transcriptional regulator, XRE family n=1 Tax=Fi... 40 0.036 UniRef50_B4AWI0 Transcriptional regulator, XRE family n=2 Tax=Ba... 39 0.039 UniRef50_B2IWM0 Plasmid maintenance system antidote protein, XRE... 39 0.039 UniRef50_Q04QE9 Putative uncharacterized protein n=2 Tax=Leptosp... 39 0.047 UniRef50_B8ECS9 Putative transcription regulator with HTH domain... 39 0.048 UniRef50_A0R9D5 Transcriptional regulator n=76 Tax=Bacillales Re... 39 0.049 UniRef50_D2MJ41 Plasmid maintenance system antidote protein, XRE... 39 0.052 UniRef50_A5GB28 Plasmid maintenance system antidote protein, XRE... 39 0.053 UniRef50_Q831G5 Transcriptional regulator, Cro/CI family n=1 Tax... 39 0.054 UniRef50_C8PMY3 Helix-turn-helix domain protein n=1 Tax=Treponem... 39 0.057 UniRef50_B8FLP7 Helix-turn-helix domain protein n=1 Tax=Desulfat... 39 0.058 UniRef50_C4Z256 Putative uncharacterized protein n=3 Tax=Bacteri... 39 0.059 UniRef50_Q73N51 DNA-binding protein n=1 Tax=Treponema denticola ... 39 0.061 UniRef50_B8F404 Plasmid maintenance system antidote protein, XRE... 39 0.063 UniRef50_Q02B76 Plasmid maintenance system antidote protein, XRE... 38 0.065 UniRef50_C2BKB1 Plasmid maintenance system antidote protein n=4 ... 38 0.068 UniRef50_Q5P6T0 Plasmid maintenance system antidote protein n=2 ... 38 0.072 UniRef50_C2WX77 Helix-turn-helix domain protein n=1 Tax=Bacillus... 38 0.074 UniRef50_A1AN18 Plasmid maintenance system antidote protein, XRE... 38 0.076 UniRef50_B9YKN8 Transcriptional regulator containing helix turn ... 38 0.076 UniRef50_C1SHA1 Addiction module antidote protein, HigA family n... 38 0.079 UniRef50_D0TRF9 HigA family addiction module antidote protein n=... 38 0.082 UniRef50_A5CUZ3 Putative plasmid maintenance system, antidote pr... 38 0.085 UniRef50_C7H2B1 Toxin-antitoxin system, antitoxin component, Xre... 38 0.093 UniRef50_B7DVG5 Transposase IS3/IS911 family protein n=1 Tax=Ali... 38 0.094 UniRef50_UPI00019687ED hypothetical protein BACCELL_00676 n=1 Ta... 38 0.096 UniRef50_UPI000066D8A2 UPI000066D8A2 related cluster n=1 Tax=unk... 38 0.096 UniRef50_C3PKW0 HTH-type transcriptional regulator n=12 Tax=Bact... 38 0.099 UniRef50_A7BXQ3 Transcriptional regulator, Cro/CI family n=1 Tax... 38 0.099 >UniRef50_P67702 Uncharacterized HTH-type transcriptional regulator ygjM n=57 Tax=Enterobacteriaceae RepID=YGJM_ECOL6 Length = 138 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW Sbjct: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE Sbjct: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 Query: 121 HAKKLATRFGISPALFID 138 HAKKLATRFGISPALFID Sbjct: 121 HAKKLATRFGISPALFID 138 >UniRef50_Q1NVE9 Helix-turn-helix motif n=6 Tax=Bacteria RepID=Q1NVE9_9DELT Length = 153 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 58/137 (42%), Positives = 90/137 (65%), Gaps = 1/137 (0%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITAW 60 + A I + L A F++ I N++ Y QAL L+D L+ + D + PL++++ I W Sbjct: 1 MGFAAIKERARDLFHEAGFISHIHNQDDYEQALALMDDLVQDYDNQRPLIEILAVAIKRW 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 E SA EFA+FN AV++ LM+Q+GL ++DLPEIGSKS+VS++L+G+R LT + Sbjct: 61 ENSAVEFADFNLQVDQQDSATAVLQVLMEQHGLGIADLPEIGSKSLVSKILNGERNLTRK 120 Query: 121 HAKKLATRFGISPALFI 137 H L+ RFG++PA+F+ Sbjct: 121 HIVALSQRFGLNPAIFL 137 >UniRef50_A4W5K3 Helix-turn-helix domain protein n=4 Tax=Enterobacteriaceae RepID=A4W5K3_ENT38 Length = 139 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 1/138 (0%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW 60 + A ++A ++L PFL G +E Y +AL LVD+L+ D ENPL+D + +KI + Sbjct: 2 ITDTARAIEATKQLVDAVPFLGGSSSESDYREALALVDYLIEKDDENPLIDFLASKIADY 61 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTL 119 E ++ FAEFN MP G+A++RTL+DQY L+ +DL EIGSKS+VS++LSG+R LT+ Sbjct: 62 ENNSDRFAEFNKSVAEMPVGVALLRTLIDQYKLSYADLKEEIGSKSLVSQILSGQRSLTI 121 Query: 120 EHAKKLATRFGISPALFI 137 H K L+ RFG+ P F+ Sbjct: 122 THIKALSARFGVRPEWFL 139 >UniRef50_C7BKI9 Putative uncharacterized protein ygjM n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BKI9_PHOAA Length = 140 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 61/140 (43%), Positives = 89/140 (63%), Gaps = 2/140 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPEN-PLLDLVCAKITA 59 MI + + L + P+L I EQ+ +AL+L+D L N N L++++ I Sbjct: 1 MINFVVVQERANALFSEIPWLTYINTSEQHKEALDLIDELFKNYENNKGLIEILATAIER 60 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLT 118 +E++APEFAEFN + +P G+A +R LMDQ+GL +DL EIG S+VS++LSG R LT Sbjct: 61 YEDTAPEFAEFNQAIENIPTGVAALRVLMDQHGLKQADLKNEIGGASLVSQILSGTRSLT 120 Query: 119 LEHAKKLATRFGISPALFID 138 + H K L+TRF +S A+FID Sbjct: 121 VTHIKALSTRFKVSSAIFID 140 >UniRef50_A7ZQE8 Helix-turn-helix DNA-binding domain protein n=27 Tax=Enterobacteriaceae RepID=A7ZQE8_ECO24 Length = 139 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 62/136 (45%), Positives = 93/136 (68%), Gaps = 1/136 (0%) Query: 3 AIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEE 62 A ++A +L PFL G +E+ Y +ALELV++L+ D NPL+D + ++I +E Sbjct: 4 NAARAVKATRELVNAVPFLGGSDSEDDYREALELVEYLIEEDDTNPLIDFLASRIAEYEN 63 Query: 63 SAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEH 121 + +FAEF+ AMP G+A++RTL+DQ+ LT +DL EIGSKS+VS++LSG+R LT+ H Sbjct: 64 NNEKFAEFDKAVAAMPVGVALLRTLIDQHNLTYADLKNEIGSKSLVSQILSGQRSLTISH 123 Query: 122 AKKLATRFGISPALFI 137 K L+ RFG+ P F+ Sbjct: 124 IKALSARFGVKPEWFL 139 >UniRef50_B4SZX2 Sea41 n=35 Tax=Enterobacteriaceae RepID=B4SZX2_SALNS Length = 142 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 2/139 (1%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDP-ENPLLDLVCAKITAW 60 + I+ P + +N+ +Y +AL LV+ L+ +D ENPL +L+CA+I+ + Sbjct: 4 TSAKKIVDTFSDAVKTVPLMGEDRNDNEYRRALALVEFLVDHDDLENPLFELLCARISEY 63 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTL 119 E+ APEF N + P G++V+RTLMDQYGL +DL E+GSKS VS +L+G+R LT+ Sbjct: 64 EKHAPEFKALNQHLEKTPPGVSVLRTLMDQYGLKAADLANELGSKSNVSNILNGRRALTV 123 Query: 120 EHAKKLATRFGISPALFID 138 H K L RF + FI+ Sbjct: 124 NHIKALTQRFKLPADAFIE 142 >UniRef50_D0KFF0 Transcriptional regulator, XRE family n=10 Tax=Bacteria RepID=D0KFF0_PECWW Length = 138 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 65/138 (47%), Positives = 96/138 (69%), Gaps = 1/138 (0%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWE 61 + AD ++A LT++ P L G + + Y AL+L ++LL ++P++PL+D++ AKI +E Sbjct: 1 MMYADAIKAANNLTSIVPLLGGSTSRKDYEDALKLTEYLLESEPDSPLIDMLTAKIDKYE 60 Query: 62 ESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLE 120 E APEF FN +A+P GIA++R LMDQ+GLT SD EIG KS+VSR+L+G+R LT++ Sbjct: 61 EDAPEFVAFNERIKALPAGIALLRILMDQHGLTQSDFEAEIGKKSLVSRILNGERTLTVD 120 Query: 121 HAKKLATRFGISPALFID 138 H LA RF I + F+D Sbjct: 121 HMSALAKRFDIPVSAFVD 138 >UniRef50_Q6LGF7 Putative uncharacterized protein Z4435 n=2 Tax=Vibrionaceae RepID=Q6LGF7_PHOPR Length = 141 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 84/139 (60%), Gaps = 2/139 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITA 59 ++ + + + ++ A P++ GI + +QY + +EL+D L+ + D L+DL+ I Sbjct: 3 IMNVEVMQEVSRQIEATMPWIHGITSRKQYDELIELMDSLVEDYDANQTLIDLMFPVIEQ 62 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLT 118 +E EF FNA ++ ++++R ++DQ GLT SDL EIG KS VS +LSG+R +T Sbjct: 63 YESKGEEFQAFNAHIDSINPAVSMLRLIIDQNGLTQSDLKAEIGGKSSVSMILSGQRSMT 122 Query: 119 LEHAKKLATRFGISPALFI 137 L+H + L+ RF I +F+ Sbjct: 123 LQHIRALSARFNIPTYMFV 141 >UniRef50_Q5NYI4 Predicted transcription regulator containing helix turn helix domain n=18 Tax=Proteobacteria RepID=Q5NYI4_AZOSE Length = 147 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLL-----NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I E Y L+ + L+ PE LD++ + A+E Sbjct: 3 IRPIHTEIDYKATLKEISALMEFDPDPGTPEGDRLDILTTLVKAYEAKHFPI-------- 54 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 P + I+ M+Q GL++ DL P IG + V +L+ KR LTL ++L GI Sbjct: 55 GAPDPVEAIKFRMEQSGLSVKDLEPFIGRSNRVYEILNRKRPLTLGMIRRLHQGLGIPAE 114 Query: 135 LFI 137 + I Sbjct: 115 VLI 117 >UniRef50_Q5NXR7 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NXR7_AZOSE Length = 135 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 14/142 (9%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCA 55 +++ D++++ ++ A +++E Y L V + P LL +V Sbjct: 1 MSVTDVIESWAAVSDALGLGAPVRDESHYEALLAFVAEAFERFGGNESHPVFGLLSIVAD 60 Query: 56 KITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKR 115 +I +EE A + +R LM + G+ SDLPE+GS+S+VS VLSGKR Sbjct: 61 RIREYEERAHPWPPM--------APHEFLRQLMAERGIRQSDLPEVGSQSVVSEVLSGKR 112 Query: 116 KLTLEHAKKLATRFGISPALFI 137 L L K L+ RF + F+ Sbjct: 113 SLNLRQVKALSERFHLPMEAFV 134 >UniRef50_Q7MYT1 Similar to unknown protein n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7MYT1_PHOLL Length = 118 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 + +E+ Y AL +VD+L+ +D ENPL+D + AKI +E S FA FN MP G Sbjct: 1 MGNSTSEDAYNDALAMVDYLIEHDDENPLIDFLSAKIADYENSNERFAAFNKAVDDMPTG 60 Query: 81 IAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +A +R LMDQ+GL+ SDL EIGSKS++S++ SG R LT+ H K L+ RF + P LF+ Sbjct: 61 VAALRVLMDQHGLSYSDLKEEIGSKSLISQIFSGTRSLTIAHIKALSERFNVRPDLFL 118 >UniRef50_C8U4T6 Predicted DNA-binding transcriptional regulator n=4 Tax=Proteobacteria RepID=C8U4T6_ECO10 Length = 119 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I+ E+ Y AL V+ + N+PE +++C I +E+ Sbjct: 3 IKPIRTEQDYEAALRAVEPMFDNEPEIDTPEGDFFEVMCLLIEEYEKKHYPIEP------ 56 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 P I IR M+Q GLT+ DL P IG K+ V VL+G R LTL ++L +FGI Sbjct: 57 --PSPIEAIRFRMEQQGLTVKDLEPAIGKKNRVYEVLNGTRSLTLPMIRRLHNQFGIPLE 114 Query: 135 LFI 137 + Sbjct: 115 SLV 117 >UniRef50_Q3J707 Transcription regulator containing HTH domain-like n=2 Tax=Nitrosococcus oceani RepID=Q3J707_NITOC Length = 155 Score = 120 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCA 55 + + + A I+N+ Y + L+L++ L+ DP N L+ ++ Sbjct: 4 TEYRKVADSFSHFSQAAHRFIHIRNKRDYQKTLDLIEELMTEAEDSRLDPLNDLIKILAG 63 Query: 56 KITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGK 114 + +E + +F+ A+ + G++ +R LM+Q+ L S L E IGSKS+VS +LSG+ Sbjct: 64 AVEEYESKQDKMVQFHKEAEGIDPGVSALRLLMEQHALGASGLREEIGSKSLVSMILSGQ 123 Query: 115 RKLTLEHAKKLATRFGISPALFI 137 R LT EH KL+ RFG+SPA+F Sbjct: 124 RSLTKEHIAKLSGRFGVSPAVFF 146 >UniRef50_C1DP02 Transcritional regulatior protein n=23 Tax=Proteobacteria RepID=C1DP02_AZOVD Length = 125 Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I+N++ Y AL+ + L N+PE +++ + A+E Sbjct: 3 VRPIRNDQDYRAALKALSPLFDNEPEPGTPEGDRFEVMLTLVEAYEAKHFPV-------- 54 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 +P + I+ M+Q GLT SDL P IG + V VL+G R LTL KL + FGI Sbjct: 55 DLPNPVDAIKFRMEQLGLTASDLSPAIGRTNRVYEVLNGTRSLTLPMIWKLHSLFGIPAE 114 Query: 135 LFI 137 I Sbjct: 115 SLI 117 >UniRef50_D2MJP6 Transcriptional regulator n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJP6_9BACT Length = 135 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 18/139 (12%) Query: 5 ADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCAKIT 58 I ++ +++ L IQNE+ Y +A+E ++ LL P LLD + + Sbjct: 9 PQIQRSWTQVSD----LFRIQNEQDYDRAVERLNTLLDEVGTDDRHPLYSLLDTLGTVLH 64 Query: 59 AWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLT 118 AWEE E GG ++R M+++ L+ SDLPEIGS+ +VS +LSGKR+L Sbjct: 65 AWEEQHHVMPEC--------GGAGLLRFFMEEHSLSQSDLPEIGSQGVVSEILSGKRELN 116 Query: 119 LEHAKKLATRFGISPALFI 137 + L+ RFG+SP++F+ Sbjct: 117 VRQILALSKRFGVSPSVFV 135 >UniRef50_D0YLK6 Transcriptional regulator, XRE family n=1 Tax=Klebsiella variicola At-22 RepID=D0YLK6_KLEVA Length = 192 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 14/127 (11%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLND-----PENPLLDLVCAKITAWEESAPEFAEFNA 72 I++ E Y A+ + L D + +L+ I +E+S Sbjct: 1 MGTWRIIKSHEDYEVAMARLLALADTDLKEGTDDFDEFELLSLLIGHYEDSHYPI----- 55 Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 P I I+ MDQ GLT +D+ +GS S VS VLSGKRKL+L ++L GI Sbjct: 56 ---DKPTPIEAIKFRMDQMGLTYADMRQYLGSASKVSEVLSGKRKLSLSMIRRLHNGLGI 112 Query: 132 SPALFID 138 + I Sbjct: 113 PADILIQ 119 >UniRef50_C4XM13 Xre family DNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XM13_DESMR Length = 391 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 12/121 (9%) Query: 22 AGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+ E Y AL ++D L+ +P ++ L+ + +EE P Sbjct: 3 RLIKTEADYNDALAVIDSLMGAEPGTEDDERLEYWAKLVEVYEEEHYPIP--------KP 54 Query: 79 GGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + I+ MDQ GLT DL P +GSK +VS VL+GKR+L+L+ L GI Sbjct: 55 TPLEAIKFAMDQQGLTRRDLEPFMGSKGVVSEVLAGKRRLSLDMIHALHAGLGIPLDTLA 114 Query: 138 D 138 Sbjct: 115 Q 115 >UniRef50_A1AYN5 Transcriptional regulator, XRE family n=4 Tax=Alphaproteobacteria RepID=A1AYN5_PARDP Length = 125 Score = 115 bits (288), Expect = 4e-25, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLN-----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 + I+ E Y AL + N PE D++ I A+E+ E Sbjct: 3 VRPIRTEADYQWALAEIAPYFDNQPEPGTPEADRFDVLADLIEAYEDRHHPIPEA----- 57 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 + +++ M+ G T +DL + GS S V++ KR LT+ K++T +G+ Sbjct: 58 ---DPVDLLKAHMEATGRTQADLGRLLGSTPRASEVVNRKRALTVAMIHKISTEWGLPAD 114 Query: 135 LFI 137 + Sbjct: 115 CLV 117 >UniRef50_D0SQN2 Helix-turn-helix domain-containing protein n=6 Tax=Proteobacteria RepID=D0SQN2_ACIJU Length = 133 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 14/139 (10%) Query: 5 ADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPLLDL---VCAKIT 58 A I QA + VAP L+ +NE+ + +E +D LL +D +PL+ L + ++ Sbjct: 3 AMIKQAVDHWHYVAPLLSKPENEDDFHTLVEALDELLDTVGDDESHPLMGLIHQLGDLVS 62 Query: 59 AWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLT 118 +E G A + LM+Q+GL SDL E+ ++S++S +LSGKR+L Sbjct: 63 DYENEHLPMP--------KGDGRAALAFLMEQHGLGQSDLAEVATQSVISEILSGKRQLN 114 Query: 119 LEHAKKLATRFGISPALFI 137 + H K L+ RF +S F Sbjct: 115 IRHIKALSERFNVSADTFF 133 >UniRef50_Q21CT0 Transcriptional regulator n=14 Tax=Proteobacteria RepID=Q21CT0_RHOPB Length = 126 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 12/125 (9%) Query: 17 VAPFLAGIQNEEQYTQALELVDHLLLN---DPENPLLDLVCAKITAWEESAPEFAEFNAM 73 +A L I+ E Y AL V+ L P+ LD++ I A+E Sbjct: 1 MATELKPIRTEADYQNALVEVEQLWGAKSGTPKGDRLDVLATLIDAYEARHDPM------ 54 Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 P I I+ M+Q GL+ DL P IG+++ V+ V++ +R L++E ++L GIS Sbjct: 55 --DPPDPIEAIQFRMEQQGLSRKDLEPLIGTRARVAEVMNRRRSLSIEMIRRLHEHLGIS 112 Query: 133 PALFI 137 + I Sbjct: 113 AEVLI 117 >UniRef50_B0SBN1 Transcription regulator containing HTH domain n=3 Tax=Leptospira biflexa serovar Patoc RepID=B0SBN1_LEPBA Length = 133 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 14/141 (9%) Query: 3 AIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCAK 56 I +I + V L+ ++QY + ++++D L+ PLL+ V Sbjct: 1 MILEIEKVKNVWDDVKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNL 60 Query: 57 ITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRK 116 I +E Q I V++ LM + LT DL +GS+ +VS +L+ KR+ Sbjct: 61 IEEYENDHF--------IQPNAEPIQVLKFLMQENSLTQKDLNILGSQGVVSEILNEKRE 112 Query: 117 LTLEHAKKLATRFGISPALFI 137 L + K LA +F +SP++FI Sbjct: 113 LNVRQIKALAEKFNVSPSVFI 133 >UniRef50_A7BUA0 Transcriptional regulator protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUA0_9GAMM Length = 133 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 14/137 (10%) Query: 7 ILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLL------LNDPENPLLDLVCAKITAW 60 + + + +A L+ E++Y Q + ++D LL P LL+ + I + Sbjct: 5 LAETVNHWSPIADILSVPHCEKEYQQMVAVLDELLNTVGDDETHPLADLLETISTLIEVY 64 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE 120 EE A+ A V+R LM+++GL +DL E+G++S +S +L+G +L + Sbjct: 65 EEKHHSVADAPAY--------EVLRFLMEEHGLMPNDLSELGNQSEISAILNGHYQLNIF 116 Query: 121 HAKKLATRFGISPALFI 137 + + F +SPA+F+ Sbjct: 117 QIQYFSKLFHVSPAVFL 133 >UniRef50_B0SI61 Transcription regulator n=6 Tax=Bacteria RepID=B0SI61_LEPBA Length = 134 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+N++ + +AL ++ L N E LD++ + A+E Sbjct: 3 IKPIKNKKDHLEALSEIEKLWDARKNTTEYDRLDILITLVDAYETKHYPI--------DD 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I ++++MD + DL IG +S + +LS KRKLTLE +K+ GI + Sbjct: 55 PDPIEALKSVMDDRNMKSVDLGNLIGGRSRATEILSRKRKLTLEMIRKINQNLGIPTDIL 114 Query: 137 I 137 + Sbjct: 115 V 115 >UniRef50_A7BUG0 Transcriptional regulator n=2 Tax=Bacteria RepID=A7BUG0_9GAMM Length = 132 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 15/135 (11%) Query: 9 QAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITAWEE 62 + A+ P + I NEE+Y A+E +++L+ P LLD++ I A+EE Sbjct: 7 EIQHHWVAIQPLFS-IDNEEEYDNAIERLNNLIDEVGTNEQHPLYGLLDMLGMVIHAYEE 65 Query: 63 SAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHA 122 E GI ++ MD++ LT SDLPEIG V +L KR L Sbjct: 66 KHYPMPEC--------SGIGMLEFFMDEHKLTCSDLPEIGEPGSVLEILKDKRVLDANQI 117 Query: 123 KKLATRFGISPALFI 137 L+ RF ISPA+FI Sbjct: 118 SALSERFHISPAVFI 132 >UniRef50_C6NZN3 Putative transcription regulator with HTH domain n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZN3_9PROT Length = 142 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 14/138 (10%) Query: 6 DILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCAKITA 59 +Q+ + L I NE+ Y + L++ LL + P + LLDLV + Sbjct: 11 KAIQSSWQKFDTMAQLRPIHNEKSYVRMTALMNSLLDVAGDDEDHPLSSLLDLVSDMVAK 70 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTL 119 +E+ +R LM+ L L EI +S +S +L+GKRK++ Sbjct: 71 YEQERYAIEPA--------DPKDALRFLMESRDLKQDALSEIVPQSNLSAILAGKRKISA 122 Query: 120 EHAKKLATRFGISPALFI 137 A KL FG+SPALFI Sbjct: 123 PLAGKLGKFFGVSPALFI 140 >UniRef50_A1RER9 Putative DNA-binding protein n=2 Tax=Shewanella RepID=A1RER9_SHESW Length = 138 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 2/138 (1%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN-DPENPLLDLVCAKITAW 60 + IA + + + L A PF+ + +++ Y AL LV+ L+ + D LLDL+ +I + Sbjct: 1 MNIARVKKLVDDLQAEMPFIRRLNSKQDYLAALNLVEALIDDLDANGLLLDLLVLRINEY 60 Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTL 119 EE + EF +FN + G AV+R LMD +GL ++D EIG + VS ++ K L+L Sbjct: 61 EEQSDEFKDFNNAVKNTDKGTAVLRVLMDLHGLKVTDFQHEIGDATTVSLIIDEKMPLSL 120 Query: 120 EHAKKLATRFGISPALFI 137 KLA RF I A FI Sbjct: 121 AQRHKLAVRFNIPCADFI 138 >UniRef50_C8TPW7 Probable transcriptional regulator n=3 Tax=root RepID=C8TPW7_ECO26 Length = 218 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 14/123 (11%) Query: 22 AGIQNEEQYTQALELVDHLLLND-----PENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 I+N E++ A+E + L +D + +L+ I +E Sbjct: 7 RIIKNSEEHAAAMERLIELASSDLQPGTEDFDEFELLGLLIEHYESREFPM--------D 58 Query: 77 MPGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 P I I+ MDQ GL+ +D+ + IGS S VS VL+ KR L+L ++L GI + Sbjct: 59 KPDPIEAIKFRMDQQGLSYADMKQYIGSASKVSEVLNRKRPLSLSMIRRLHDGLGIPADI 118 Query: 136 FID 138 I Sbjct: 119 LIQ 121 >UniRef50_Q4KCW1 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCW1_PSEF5 Length = 212 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 4/122 (3%) Query: 20 FLAGIQNEEQYTQALELVDHLLLNDP----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 F+ GI+ Y +A L+D L E +L + +I A++ + +F E NA + Sbjct: 29 FVHGIKTPADYERATNLLDELTDGRELSKIEEKILVELEDEILAYQRHSEQFRESNAAFE 88 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 A + +I+ LM+ GLT SDLPEIG K+ VS+VLSG R ++ + A LA RF + P Sbjct: 89 ATCTPVQLIKDLMETLGLTGSDLPEIGDKTAVSKVLSGDRPISHKMAYALAERFSMEPRA 148 Query: 136 FI 137 F+ Sbjct: 149 FV 150 >UniRef50_B3PVM1 Putative transcriptional regulator protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PVM1_RHIE6 Length = 125 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+N++ Y AL L+ L PE LD++ + A+E + Sbjct: 4 LKPIRNDDDYEDALLLLKQLWGAKDGSPEADKLDILATLLDAYEAGRYPI--------DL 55 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I I M+Q GLT DL P +GS+ V+ +L+ KR L+L+ ++L I + Sbjct: 56 PDPIDAIIFRMEQQGLTRKDLEPILGSRGRVAEILNRKRALSLDMIRRLHEHLDIPLDIL 115 Query: 137 ID 138 I Sbjct: 116 IQ 117 >UniRef50_Q1GIG8 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=Q1GIG8_SILST Length = 123 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 12/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ + + AL ++ L +P LD++ + +EE F E Sbjct: 3 IRPIRADADHAAALSRIEELWGAEPGTEAGDELDILVDLVEHYEERQFPFPEL------- 55 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 I +++ M+ G T +DL + GS+ S VL+ KR LT++ KL++ + I Sbjct: 56 -APIDLLKAHMEATGRTQADLAALLGSRPRASEVLNRKRALTVDMIHKLSSEWHIPAECL 114 Query: 137 I 137 + Sbjct: 115 V 115 >UniRef50_B1FYI7 Helix-turn-helix domain protein n=6 Tax=Burkholderia RepID=B1FYI7_9BURK Length = 140 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%) Query: 3 AIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCAK 56 + DI ++ L A P + I+NE+ Y +EL L N+P L +V Sbjct: 9 SFPDIARSWAALQAQLP-ITPIRNEQDYQTMVELSSALADHLNGKENEPLTDLHAIVSDL 67 Query: 57 ITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRK 116 + +W+ + V+R L++ +GL DL I S ++VS +L+G+R Sbjct: 68 VRSWKAQ--------NVTLPKAEPREVLRHLLETHGLRQKDLMGIASPTVVSDILAGRRA 119 Query: 117 LTLEHAKKLATRFGISPALFI 137 ++ + AK LA RF + F+ Sbjct: 120 ISKKVAKALAQRFQTDVSAFL 140 >UniRef50_C4KD79 Putative transcription regulator with HTH domain n=1 Tax=Thauera sp. MZ1T RepID=C4KD79_THASP Length = 126 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+ + ++ +AL V+ L E+ L+++ + A+E + Sbjct: 3 LKPIRTDSEHAEALAEVERLWDVPTGSAESDRLEVLAMLVEAYETARFPI--------EA 54 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I + +MD GLT DL P IG + V+ +++ R L++ ++L++ G+ + Sbjct: 55 PDPIEFLEYVMDSRGLTRKDLEPYIGPRGRVADIMNRARPLSIGMIRRLSSGLGLPADVL 114 Query: 137 ID 138 I Sbjct: 115 IQ 116 >UniRef50_D2L5E8 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5E8_9DELT Length = 140 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 16/134 (11%) Query: 12 EKLTAVAPFLAG--IQNEEQYTQALELVDHLLL------NDPENPLLDLVCAKITAWEES 63 + + I+++ Y + LV+ LL P + +L + ++ A+EE+ Sbjct: 15 QAWLPFKELVGPTTIKSQADYDRIASLVNVLLDAIRDDATHPLSDVLHYLTIQMEAYEEA 74 Query: 64 APEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAK 123 E AV+R LM+Q+GL SDL + +S +S +L+GKR ++ E AK Sbjct: 75 HVAIPEA--------DPKAVLRFLMEQHGLNQSDLGDCAPQSHISAILAGKRGISKETAK 126 Query: 124 KLATRFGISPALFI 137 KLA RF ++ LF+ Sbjct: 127 KLAKRFHVNADLFL 140 >UniRef50_Q1VUA7 Helix-turn-helix motif n=2 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VUA7_9FLAO Length = 131 Score = 105 bits (262), Expect = 4e-22, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I++++ Y ALE ++ + + E +++ I +E Sbjct: 12 VKPIKSDKDYRNALERLEVIFDASIDTKEGDEAEILSLVIENYENEHYPI--------EA 63 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I I+ M++ + DL IG KS VS VL+ K++LT++ ++L IS ++ Sbjct: 64 PDPIEAIKIRMEELNMRQKDLVGIIGGKSRVSEVLNRKKRLTVDMIRELERILQISASVL 123 Query: 137 ID 138 ++ Sbjct: 124 VN 125 >UniRef50_Q8YMS4 All4855 protein n=4 Tax=Bacteria RepID=Q8YMS4_ANASP Length = 126 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 12/121 (9%) Query: 22 AGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+NE Y AL+ + L N PE+ L+++ + A+E+ + A P Sbjct: 5 RPIRNEADYRAALDEIARLFDSELNTPESDRLEVLTTLVEAYEQKHYQIAA--------P 56 Query: 79 GGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I I ++ GL+++DL P IGSK+ +S +L ++ LTLE ++L + GI + I Sbjct: 57 DPIEAILYYLESRGLSVNDLEPVIGSKTEISNILHRRQALTLEIIRRLHQQLGIPAEVLI 116 Query: 138 D 138 Sbjct: 117 Q 117 >UniRef50_A1W8N9 Helix-turn-helix domain protein n=1 Tax=Acidovorax sp. JS42 RepID=A1W8N9_ACISJ Length = 409 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPE----NPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 + I+NE QY + L+L+ L+ + N L+L+ + +EE Sbjct: 13 IRVIRNERQYEECLQLLRSLMASASNGAKPNDELELLAMVLERYEEERYALTSI------ 66 Query: 77 MPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 + I M ++G + DL +GS S S +L+ KR L++EH + L I + Sbjct: 67 --DPVDAIALKMAEFGWSQKDLATALGSASRASEILNRKRALSIEHIRVLHRELKIPAEV 124 Query: 136 FI 137 I Sbjct: 125 LI 126 >UniRef50_B0T536 Helix-turn-helix domain protein n=1 Tax=Caulobacter sp. K31 RepID=B0T536_CAUSK Length = 124 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 14/126 (11%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNA 72 ++ I++E Y QAL + N+PE +L+ + +EE F Sbjct: 1 MTKISIIRDEAAYAQALVEFEAFFDNEPEARSDAGDRFELLGLLLAKYEEERFPFPR--- 57 Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 G + IR M++ GL SDL E+ GS+S S +L+G R+LTL + L +GI Sbjct: 58 -----TGPVEAIRFAMERQGLGQSDLAELLGSRSRASEILNGHRELTLPQIRLLTKSWGI 112 Query: 132 SPALFI 137 I Sbjct: 113 PAQALI 118 >UniRef50_A3JBK0 Plasmid-related protein n=2 Tax=Alteromonadales RepID=A3JBK0_9ALTE Length = 396 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 14/126 (11%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDPE-----NPLLDLVCAKITAWEESAPEFAEFNA 72 + I+ E++ QA+ V L+ DP+ LDL+ + +E Sbjct: 1 MGHIKIIKTPEEHEQAMARVMGLMDADPQPGSQDADELDLLALLVERYERKEFPI----- 55 Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 +PG + I MDQ GL DL P IGS S V+ VL+G R L+L ++L GI Sbjct: 56 ---DVPGPLDAICFRMDQQGLKKKDLIPYIGSASKVTEVLNGTRNLSLNMIRRLTDGLGI 112 Query: 132 SPALFI 137 + I Sbjct: 113 PADVLI 118 >UniRef50_Q20YM0 Transcriptional regulator, XRE family n=8 Tax=Proteobacteria RepID=Q20YM0_RHOPB Length = 125 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 55/121 (45%), Gaps = 11/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+N++ + AL ++ L + LD++ + +EES A + Sbjct: 3 IRPIRNDDDHAAALTEIEKLWGAPTGTDDGDKLDVLATLVEKYEESRWP-------AVDI 55 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 I ++ + G T ++L ++ GS+S S +L +R LT+E + ++ + I L Sbjct: 56 ADPIDLLHYAISDLGHTQAELADLLGSRSRASEILGRQRALTVEMIRTISEAWKIPAELL 115 Query: 137 I 137 + Sbjct: 116 V 116 >UniRef50_B0C5K8 HTH transcriptional regulator n=4 Tax=Cyanobacteria RepID=B0C5K8_ACAM1 Length = 132 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 13/121 (10%) Query: 22 AGIQNEEQYTQALELVDHLLL----NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I +E + A+ L L + LLDL+ I +E+SA + Sbjct: 20 KVIASERENEAAIALAQKLEHLPNQTSEQEALLDLLVMLIEKYEDSAYPIL--------V 71 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 V+ LM+ G DL IGS+ +VS V++GKR +++ AK LA FG+ LF Sbjct: 72 SSPREVLLHLMEAKGCIQEDLVGVIGSRGVVSEVVNGKRGISIAQAKSLADYFGVDAGLF 131 Query: 137 I 137 I Sbjct: 132 I 132 >UniRef50_B4WNC3 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNC3_9SYNE Length = 132 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 15/141 (10%) Query: 3 AIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCAK 56 A ++ + +AP L I+ E+ Y ++E ++ L+ P LL+ + Sbjct: 1 MTAIASDIRKQWSVIAPILT-IRTEQDYDHSIERLNSLVDEVGTDETHPLYTLLETLSLV 59 Query: 57 ITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRK 116 I ++EE+ + GI V+ LM+++ LT SDLPE+G K V+++L+ + + Sbjct: 60 IQSYEETHHAIPDS--------DGIEVLSYLMEEHALTESDLPELGEKVAVTKILARQEE 111 Query: 117 LTLEHAKKLATRFGISPALFI 137 L L H + LA RF +SP++FI Sbjct: 112 LELHHIRALANRFNVSPSVFI 132 >UniRef50_B7L3P4 Putative uncharacterized protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L3P4_METC4 Length = 137 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 14/121 (11%) Query: 22 AGIQNEEQYTQALELVDHLLLN-----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 I+ E +Y A+E +D L N PE + + I+ +E+ E Sbjct: 5 RLIKTEAEYKAAMEEIDALFANLPEPGTPEGDRFEFLSLLISHYEDQHFPIPEA------ 58 Query: 77 MPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 + ++R + G + ++L E+ GS+ S V++ KR LTL+ + ++ + + Sbjct: 59 --DPVDLLRFAITDMGRSQTELAELLGSRPRASEVMNRKRALTLDMIRGISAAWKLPFEA 116 Query: 136 F 136 Sbjct: 117 L 117 >UniRef50_B3SED7 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SED7_TRIAD Length = 165 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 12/116 (10%) Query: 27 EEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAV 83 E Y AL +D L N + L+++ + +EE + + P I Sbjct: 46 EYDYKNALNTIDKLWDAKENTEKGDYLEILTTLVEKYEEEHYDISA--------PDPIEA 97 Query: 84 IRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 I+ +M+Q + ++L +I GS+S VS +L+ +RKL L + L I + + Sbjct: 98 IKFIMEQKNIKRTELEKILGSRSRVSEILNKQRKLNLRMIRNLHNTLSIPYEILAE 153 >UniRef50_C0GLZ8 Putative transcription regulator with HTH domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLZ8_9DELT Length = 139 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 12/122 (9%) Query: 21 LAGIQNEEQYTQALELVDHLL---LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+N+ +Y QALE ++ L ++ E L+L+ + +E Sbjct: 3 LGLIKNDTEYYQALERIETLTSAGMDHEEERELELLVHLVDKYEREQYPI--------EY 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P ++ IR M GL DL EI GS S VS VL+ KR+L+L + L I + Sbjct: 55 PDPVSAIRLRMQDLGLRQKDLAEIIGSSSKVSEVLNKKRRLSLAMIRALHAHLNIPAEVL 114 Query: 137 ID 138 + Sbjct: 115 LQ 116 >UniRef50_B6J222 Transcriptional regulator n=3 Tax=Coxiella burnetii RepID=B6J222_COXB2 Length = 170 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 1/104 (0%) Query: 9 QAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPEN-PLLDLVCAKITAWEESAPEF 67 Q L A F+ IQN+++Y +AL L++ L+ + N PL++++ A I WE A EF Sbjct: 5 QLRVDLFEEAHFIGHIQNKKEYEEALALMEELIEDYNYNKPLIEILAASIERWENEASEF 64 Query: 68 AEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVL 111 EFN + + G AV++ LM+QY L +SD PEIGSKS+VS++L Sbjct: 65 REFNKHIRRLQPGPAVLKVLMEQYHLGVSDFPEIGSKSLVSKIL 108 >UniRef50_Q2RRG3 Transcription regulator containing helix turn helix domain n=20 Tax=Bacteria RepID=Q2RRG3_RHORT Length = 127 Score = 99.3 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 12/125 (9%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMA 74 L I+ + AL ++ L+ +P E LD++ I +E Sbjct: 1 MGILKPIRTPADHAAALARLEALMDAEPGTAEGEDLDVLADLIEHYESKQVPI------- 53 Query: 75 QAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 P A I M+Q GL+ DL P IGS++ V VL+G R LTL A+ L GI Sbjct: 54 -GYPPPHAAIAFRMEQAGLSPQDLVPLIGSQAEVLEVLAGTRPLTLAMARALHIHLGIPA 112 Query: 134 ALFID 138 + + Sbjct: 113 EVLLQ 117 >UniRef50_A3XES4 Putative uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XES4_9RHOB Length = 129 Score = 99.3 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLN-----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 L I+ +E AL ++ E D++ I A+E Sbjct: 3 LRAIRTDEDLDWALAEIEQYFDTPPVPGTEEADRFDILTDLIEAYENREYPIEAL----- 57 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 I ++ MD SDL E+ G K S +++ KR LTL +K+ T + I A Sbjct: 58 ---DPIETLKVFMDIKKKKQSDLAELVGGKPRASEIINRKRPLTLRMIQKINTSWKIPAA 114 Query: 135 LFI 137 I Sbjct: 115 SLI 117 >UniRef50_Q01YH3 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YH3_SOLUE Length = 134 Score = 99.3 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 16/138 (11%) Query: 6 DILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITA 59 D + E L P + I +E +Y + L L+ + E LL+++ I Sbjct: 7 DASKYRELLNDTLPLV--IHDEAEYQRLLHGAGKLMEKVDDETTEEEGRLLEMLSMLIEE 64 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTL 119 +E+ +++ L+ + GL S L ++ KS VS +LSG+R ++ Sbjct: 65 YEDRVHPLPA--------TSPHKMLQHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISK 116 Query: 120 EHAKKLATRFGISPALFI 137 AKKLA RF + LF+ Sbjct: 117 AQAKKLAARFKVPVELFL 134 >UniRef50_B3KLY3 Possible transcriptional regulator n=2 Tax=Sinorhizobium meliloti RepID=B3KLY3_RHIME Length = 126 Score = 99.3 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 14/123 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 +Q+E +Y AL+ V N+P E D + I +E Sbjct: 7 FRTLQSEGEYNAALKEVRPYFENEPDEGSEEAAHFDALVLLIEQYEGKHYPIP------- 59 Query: 76 AMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 + V++++M T +DL IGSK+ + +L+GKR++ L+ +KL+ + I Sbjct: 60 -TASPVEVVKSVMAANNYTRADLVAVIGSKARAADLLNGKREINLDQIRKLSKEWNIPAG 118 Query: 135 LFI 137 I Sbjct: 119 SLI 121 >UniRef50_B6IV89 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IV89_RHOCS Length = 120 Score = 98.9 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 13/122 (10%) Query: 21 LAGIQNEEQYTQALELVDHLLLN---DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ E + AL +D L+ PE L+++ + +E A Sbjct: 3 IRPIKTPEDHKAALARIDDLMDAAEGTPEVAELEVLSILVERYERDAFPI--------DP 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGK-RKLTLEHAKKLATRFGISPAL 135 P + I+ M+Q G DL + +GS+S S ++ G ++L+L ++L + I Sbjct: 55 PSALDAIQFRMEQAGYEQRDLAKVLGSRSRASEIVHGSIQRLSLTQIRRLHQAWKIPADA 114 Query: 136 FI 137 I Sbjct: 115 LI 116 >UniRef50_D2QDY8 Putative transcription regulator with HTH domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QDY8_9SPHI Length = 117 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ E Y AL+L+D L+ + LD++ + +E A Sbjct: 3 IKPIRTETDYRAALQLIDTLVDCEDGSEQADQLDILSILVENYENDHYPIAP-------- 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 P I IR M+Q G++ ++ +G + +L+ + LTL K L + I Sbjct: 55 PDPIDAIRFRMEQTGMSEQEIGIYMGGEVAARAILNREEPLTLSMIKVLYRQLHIPAESL 114 Query: 137 I 137 + Sbjct: 115 L 115 >UniRef50_B2VFH6 Predicted transcription regulator containing HTH domain n=1 Tax=Erwinia tasmaniensis RepID=B2VFH6_ERWT9 Length = 156 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 13/120 (10%) Query: 23 GIQNEEQYTQALELVDHLLLNDPENPLL-----DLVCAKITAWEESAPEFAEFNAMAQAM 77 ++N+ + L+D L + + V ++ +E + Sbjct: 42 PVENDGDLQGRMALIDALYACATDVEHFAAQCAERVADRVHEYEMKHLRMPDV------- 94 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + LM + G+ DL I ++S++S +++GKR + + K LA F + +FI Sbjct: 95 -SPGEALSVLMKERGIRQVDLQHIATQSVISDIINGKRAMNVSQIKGLARFFRVPVDMFI 153 >UniRef50_Q6YRQ3 Slr6101 protein n=3 Tax=Chroococcales RepID=Q6YRQ3_SYNY3 Length = 139 Score = 96.2 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%) Query: 22 AGIQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I++ E + +V++LL + E L+++ I +E+ + Sbjct: 15 RPIRSPEDFGATQAVVNNLLDKEVLTADEEDYLEVLGTLIYEYEQQQGDI-------IPD 67 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 G +++ L+++Y L DL P ++S+VS VL GKR+LT H ++LAT F +SPA+F Sbjct: 68 IHGTELLQILIEEYELKQKDLVPIFKTESIVSEVLKGKRQLTTRHIQELATFFHVSPAVF 127 Query: 137 I 137 Sbjct: 128 F 128 >UniRef50_C7QXE5 Transcriptional regulator, XRE family n=5 Tax=Chroococcales RepID=C7QXE5_CYAP0 Length = 132 Score = 95.8 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 13/121 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLN----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+NE +Y Q +++ L++N E +L L+ + I ++E Sbjct: 20 KVIENEAEYQQYSDILIELMMNPNRSSEETEILKLIASLIKEFDEKQE--------QPEP 71 Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +++ LM+++ + DL + IGSK +VS V++GKR ++ AK LA F +SPALF Sbjct: 72 ASPHEILQHLMEEHNMRQVDLVDKIGSKGVVSEVVNGKRAISKSQAKTLAGIFHVSPALF 131 Query: 137 I 137 + Sbjct: 132 L 132 >UniRef50_Q88R60 Helix-turn-helix domain protein n=2 Tax=Pseudomonas putida RepID=Q88R60_PSEPK Length = 179 Score = 95.4 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 13/120 (10%) Query: 23 GIQNEEQYTQALELVDHLLLNDPENP-----LLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+++ + + L+D L + ++V ++ +E + + Sbjct: 64 PIKDDAELEARMALIDELYSHADSEGHAAARFAEMVADRVYEYESESVLVPFASQA---- 119 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + L+ G+ DL I ++S VS +L+ KRK+T+ K A F + F+ Sbjct: 120 ----EALAFLLSDRGVKQKDLSAIATQSAVSEILNNKRKMTVAQIKGFAEFFSVPVEFFM 175 >UniRef50_Q3SMY3 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SMY3_NITWN Length = 124 Score = 94.6 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVC--AKITAWEESAPEFAEFNAMAQAMP 78 L IQN+ + A LV L+ + +V I A+E + + P Sbjct: 5 LIVIQNQADHEAAKALVGKLIQSSDAADRARMVAQSRLIEAYERTRWP--------RKAP 56 Query: 79 GGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++ L++Q+GLT +DL P +G+ S VS V+SGKR+L++ K+L RF I L I Sbjct: 57 PLPDLLSYLVEQHGLTRADLVPLLGTASRVSEVMSGKRELSMTMVKRLRERFHIPADLLI 116 >UniRef50_B4WWD1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WWD1_9SYNE Length = 149 Score = 94.6 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLNDP----ENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I+++ +E+V+ L+ + E +L+ I +EE ++ Sbjct: 30 KVIKSKSGLDATVEVVESLMNKEELTTDEKDYKELLIMLIDDYEEKKFSISDIY------ 83 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 G+ +++ LM + GL DL I +KS+VS +LSG+R+LT ++ ++LA F I + F Sbjct: 84 --GVELLKGLMKERGLRQKDLVHIFKTKSVVSEILSGQRELTPQYTRRLAEYFNIPDSAF 141 >UniRef50_C6W2R3 Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2R3_DYAFD Length = 134 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 18/127 (14%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPEN---------PLLDLVCAKITAWEESAPEFAEFN 71 + I ++ + +A ++++ L+ D +L+ + +E+ Sbjct: 13 IKPITSQADFEEAGKVIEALMDADLLENETERKKALDILEAITVLAIDYEKKHYPMP--- 69 Query: 72 AMAQAMPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 P I I+ M+Q L+ D+ P G ++ VS VL+ KR LT++ ++++ G Sbjct: 70 -----KPDPIEAIKERMEQLHLSRKDVAPYFGGENRVSEVLNKKRSLTIKMIREISKNLG 124 Query: 131 ISPALFI 137 I + Sbjct: 125 IPAETLL 131 >UniRef50_D2QV84 Transcriptional regulator, XRE family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QV84_9SPHI Length = 148 Score = 88.9 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 14/121 (11%) Query: 22 AGIQNEEQYTQALELVDHLL----LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I++E+QY ++ L+ + ++L+ I W+ F + Sbjct: 7 KIIKSEKQYRDYCTDLETLVTGNDQGENTQDEIELLTYLIEKWDAEHNSFEDV------- 59 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 I ++ LM + L DL +I SKS+VS +L KR L+ E + L++ F +S Sbjct: 60 -DPIELLTALMSEKSLKAKDLTQILGVSKSLVSDILHYKRGLSKEIIRTLSSYFSVSQEA 118 Query: 136 F 136 F Sbjct: 119 F 119 >UniRef50_B2J1Y0 Transcription regulator containing HTH domain-like protein n=2 Tax=Cyanobacteria RepID=B2J1Y0_NOSP7 Length = 142 Score = 87.7 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 12/113 (10%) Query: 22 AGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+ EE+Y +AL V+ ++ + E L +L+ I +EE Sbjct: 20 KPIKTEEEYNRALTAVEGMMSGELAEAETALFELLVLLIENYEEHHYSM--------GKS 71 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 +A + +LM ++ + L+ L EI GS +V V++G+RK+T AK LA F Sbjct: 72 KPVATLESLMHEFDVELTSLVEIFGSVKIVKEVVNGQRKVTQSEAKSLAKFFN 124 >UniRef50_B7K211 Putative transcription regulator with HTH domain n=3 Tax=Chroococcales RepID=B7K211_CYAP8 Length = 146 Score = 85.4 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLND-----PENPLLDLVCA 55 M + + L I +E+Y Q L + ++L+ E L L+ Sbjct: 1 MTLTLNKKNYLKLLEKTQIIPKIIDTQEEYEQYLAVAENLIAKKDNRTPEETALFRLLVR 60 Query: 56 KITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSG 113 I +EE+ +F + +++ L++ T DL I S+ ++ +++G Sbjct: 61 LIEDYEENIYSLEDFTNL-----SAHEILQHLLEYSNTTPEDLSNIINCSQELILALING 115 Query: 114 KRKLTLEHAKKLATRFGISPALFID 138 ++ + + AK L F + P+LFI+ Sbjct: 116 EQTINQQQAKLLGMYFKVDPSLFIE 140 >UniRef50_B7KKN6 Putative transcription regulator with HTH domain n=2 Tax=Cyanothece RepID=B7KKN6_CYAP7 Length = 132 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 13/120 (10%) Query: 23 GIQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I EE +AL +V+ L+ EN L DL+ I +E+ Sbjct: 21 PITTEEDNEKALAIVEELMHRKNRSLEENELYDLLIVLIEKFEQEFY--------YTQNS 72 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +++ LM+Q G+T ++L ++ S + + ++ GKR++T E+A+ L F + P+LFI Sbjct: 73 NPYSMLLFLMEQQGITKTELGKVFESLEIAADLVEGKREITQEYAQILGRFFQVEPSLFI 132 >UniRef50_B3CGY1 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CGY1_9BACE Length = 128 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 8/124 (6%) Query: 23 GIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKIT-AWEESAPEFAEFNAMAQAMPGGI 81 I+ E+++ ++ ++ ++L+ + + + +E+ A +PG + Sbjct: 2 KIKTEKEFRAYQAEMESIITKGTSLGDMELLSEEDKTKYIALSQAISEWEAAYHPLPGRV 61 Query: 82 -----AVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 IR M+ L + + S+S VS +L+G+R L L K+L GI Sbjct: 62 STLIIDAIRAKMEANNLKQKETAKCLGISESRVSDILNGRRSLNLNIVKRLRDNLGIPAD 121 Query: 135 LFID 138 +D Sbjct: 122 FILD 125 >UniRef50_UPI00019686DF hypothetical protein BACCELL_00041 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019686DF Length = 141 Score = 84.6 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 8/126 (6%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKI-TAWEESAPEFAEFNAMAQAMPG 79 + I ++ QY + + ++ L+ + ++L+ + E+ A +PG Sbjct: 14 IMKISSDSQYREYKKEMEVLIQKGTKLGDMELLSEADKEEFVRLTDAIYEWEAAYHPLPG 73 Query: 80 GI-----AVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 + I+ M + D + S+S VS +LSG+R L L K+L FGIS Sbjct: 74 KVSTVITDAIKQRMSIGNIKQKDAAKKLGVSESRVSELLSGRRSLNLNMVKRLRDNFGIS 133 Query: 133 PALFID 138 +D Sbjct: 134 ADFILD 139 >UniRef50_C6VVJ1 Transcriptional regulator, XRE family n=2 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VVJ1_DYAFD Length = 131 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 12/119 (10%) Query: 23 GIQNEEQYTQALEL---VDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPG 79 I +E +Y A+ V + E+ L+ I +E+ E Sbjct: 10 PIVSEAEYEAAMSRYQVVKYAPAGTQEHREKMLLLLLIEEYEQKHDSLPEL--------D 61 Query: 80 GIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I +I+ M+ GL + L E+ G + VS+VL+ K+ L+L +K + I L + Sbjct: 62 PIELIKFRMEDLGLKAAALAEVYGDRGTVSKVLNYKQPLSLSMIRKFSELLKIPAELLL 120 >UniRef50_A7M640 Putative uncharacterized protein n=6 Tax=Bacteroides RepID=A7M640_BACOV Length = 127 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 18/127 (14%) Query: 21 LAGIQNEEQYTQALELVDHLL--------LNDPENPLLDLVCAKITAWEESAPEFAEFNA 72 + I+N+ QY A++ V+ LL LNDP + L+L+ + + E E Sbjct: 7 MTKIENQNQYEWAVKRVEDLLPLVKDDTPLNDPNSIELELLSNLVADYSEEHFSLGE--- 63 Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFG 130 P + V++ M + GL L ++ S S +S +SGK + TL+ A++++ + Sbjct: 64 -----PSLVDVLKLRMYEMGLNQKSLSQLIGVSPSRLSDYISGKCEPTLKVAREISKKLN 118 Query: 131 ISPALFI 137 I ++ + Sbjct: 119 IDASIVL 125 >UniRef50_UPI00016C502D hypothetical protein GobsU_17351 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C502D Length = 145 Score = 82.7 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 14/129 (10%) Query: 14 LTAVAPFLAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEF 70 L P L ++ + AL ++D LL ++ L + A + A+E Sbjct: 16 LVRQFPLLCP-TSDSELDAALMVIDDLLTQELDEGGEAYLSALTALVHAYEREHHAIPGA 74 Query: 71 NAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATR 128 V+R L+ LT ++L + S VS ++SGKR+ T E LA Sbjct: 75 --------TPAEVLRELVSANDLTATELAKRAGIALSTVSALMSGKRRPTPEQMASLAGI 126 Query: 129 FGISPALFI 137 F + P +F+ Sbjct: 127 FKVHPGVFL 135 >UniRef50_A7BR65 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BR65_9GAMM Length = 155 Score = 82.7 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 9/120 (7%) Query: 22 AGIQNEEQYTQALELVDHLLL-NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP-- 78 + IQ E++ + +++D L+ +N ++ + I + EF + +P Sbjct: 42 SPIQTEDEVLERAKVMDELMDMATGDNDIVMIFANAI------SDRIEEFENVQLDLPRM 95 Query: 79 GGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 V+ LM + + DL EI +++ +L+ +R +T+ K + F + +FID Sbjct: 96 KSGEVLANLMHLHHIESKDLFEIAPPNVIVELLNQQRSMTIAQVKAFSQFFHVPATIFID 155 >UniRef50_A9M4N9 Putative uncharacterized protein n=1 Tax=Vibrio sp. 23023 RepID=A9M4N9_9VIBR Length = 113 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 12/97 (12%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+ EE AL + + N PE LD++ + A+EE+ A Sbjct: 3 IKPIKTEEDNRAALARIAEIFDAEPNTPEGDELDVLATLVEAFEEAHYPIAP-------- 54 Query: 78 PGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLSG 113 P I I+ M+Q GL L P +G +S V+ +LS Sbjct: 55 PDPIEAIKFRMEQQGLEDRVLVPFLGQRSCVTEILSR 91 >UniRef50_C6VXL2 Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXL2_DYAFD Length = 121 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 11/124 (8%) Query: 21 LAGIQNEEQYTQALELVDHLLLN------DPENPLLDLVCAKITAWEESAPEFAEFNAMA 74 + I++E++Y ALE V+ L+ D E ++ + I A+E+ F M Sbjct: 1 MEAIKSEKEYEDALEEVNTLMKKGDDLISDEEADRVEELALAIQAYEDVHYPFP----MP 56 Query: 75 QAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 +++P + R ++ L++L +G K+ +S++L G+R + K + + GI P Sbjct: 57 KSIPELVESKRFELNLSIAGLAELLGLG-KTKLSKILRGQRDPDIPFLKAVYHKLGIDPG 115 Query: 135 LFID 138 + +D Sbjct: 116 VLLD 119 >UniRef50_A8YMC7 Similar to tr|Q6YRQ3|Q6YRQ3 n=4 Tax=Cyanobacteria RepID=A8YMC7_MICAE Length = 132 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 13/124 (10%) Query: 19 PFLAGIQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFAEFNAMA 74 I+ E + +AL +V+ L+ E+ L +L+ I +E+S Sbjct: 17 HLPKVIKTEAENEKALAIVEELMHRQQRTPEEDELYELLIFLIGNFEKSFYL-------- 68 Query: 75 QAMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 Q +++ LM+Q + D+ I GS + S ++ GK ++ E AK L F + Sbjct: 69 QESTTSHSMLLFLMEQQSVNKKDIARILGSDKIASSLIEGKGSISQEQAKLLGHFFHVDY 128 Query: 134 ALFI 137 +L + Sbjct: 129 SLLM 132 >UniRef50_C1ZHD0 Predicted transcription regulator containing HTH domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHD0_PLALI Length = 143 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 14/122 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLL----NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 LA I+++ +A +++D LL N+ E LD + + +E+ A Sbjct: 26 LASIRSDAHLVEAQKVIDGLLARERLNEGEATYLDALSDLVETYEDEHHAIAPATDA--- 82 Query: 77 MPGGIAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 +++ L++ GL+ + L +S +S VL GKR+ + + KLA F I A Sbjct: 83 -----DLLQQLLEAKGLSQAQLSREAGLPRSTISEVLKGKRRFSRQMIHKLAAYFQIDAA 137 Query: 135 LF 136 + Sbjct: 138 VL 139 >UniRef50_A8YNZ8 Similar to tr|Q8YMS4|Q8YMS4 n=3 Tax=Chroococcales RepID=A8YNZ8_MICAE Length = 141 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 13/121 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKIT----AWEESAPEFAEFNAMAQAM 77 I+NE + QA+ L + L + + + + +E+ E Sbjct: 27 KVIENEAENEQAINLAEALSHRENRSLEETTLLNLLLTLIEKYEQDHYPLEESE------ 80 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +++ LM+ L DL +I GSK++VS +L G++ +T + A KL F + +LF Sbjct: 81 --PHSILWELMEANNLQEKDLSDILGSKTIVSDILIGQQIITEKQAVKLGQFFHVDSSLF 138 Query: 137 I 137 + Sbjct: 139 L 139 >UniRef50_C6W022 Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W022_DYAFD Length = 145 Score = 78.5 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 12/120 (10%) Query: 22 AGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I+N EQY + +L ++ +DL+ I ++ N + + Sbjct: 7 KVIRNFEQYNNYCNELIQMLESENPDQYEEEIDLLTVLIEHYDAE-------NTIFKGEF 59 Query: 79 GGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 + ++++LM + + D+ E+ SK VS +L+ K+ ++ + +KLATRF + F Sbjct: 60 DPVELLKSLMKDHQMKAKDIAELLNVSKGYVSEILNYKKGMSKDVIRKLATRFAMRQEAF 119 >UniRef50_B4SAF3 Helix-turn-helix domain protein n=2 Tax=Chlorobium/Pelodictyon group RepID=B4SAF3_PELPB Length = 126 Score = 77.3 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 9/124 (7%) Query: 23 GIQNEEQYTQALELVDHLL------LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 I ++ QY +AL ++ + N + + + I +E+ + + Sbjct: 2 KIVSKAQYEKALREIESFMNAFSDGENATNDAKITELAKAIEDYEDRHVVMPMPLVIKKP 61 Query: 77 MPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 VI M + + D+ ++ S + +S V+ GKRK+ +E AK+L G+ P Sbjct: 62 ETLP-DVIELKMFEKKMKRKDMAKLLGISDTRLSEVMHGKRKVNMELAKRLYKTLGVDPK 120 Query: 135 LFID 138 ++ Sbjct: 121 FILE 124 >UniRef50_B4B4A9 Transcription regulator containing HTH domain-like protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B4A9_9CHRO Length = 140 Score = 76.1 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 12/97 (12%) Query: 20 FLAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 L I+ E Y +AL ++ L N PE LDL+ + A+E+ A Sbjct: 2 LLKPIKTETDYQKALAEIESLFDAQPNTPEYERLDLLTTLVEAYEKIHYPIAP------- 54 Query: 77 MPGGIAVIRTLMDQYGLTLSDLP-EIGSKSMVSRVLS 112 P I I ++ GL++ L +I +K ++ +L Sbjct: 55 -PDPIEAILYYLNSRGLSIDALQNDIENKINITDILE 90 >UniRef50_A7LWN9 Putative uncharacterized protein n=4 Tax=Bacteroides RepID=A7LWN9_BACOV Length = 120 Score = 72.7 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 18/122 (14%) Query: 26 NEEQYTQALELVDHLL----LNDPENP----LLDLVCAKITAWEESAPEFAEFNAMAQAM 77 +EQY AL V+ LL + P N L ++ + A+E+ Sbjct: 5 TKEQYEFALARVEELLPLVDDSTPANDKSMVELSVMSDIVIAYEKEHFPI--------EK 56 Query: 78 PGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 P +I +++ G+T L EIG S S V+ +SG+ + TL+ A+ L I PA Sbjct: 57 PTVAELIELSLEEKGMTQKQLASEIGVSPSRVNDYISGRSEPTLKIARLLCRVLNIHPAA 116 Query: 136 FI 137 + Sbjct: 117 ML 118 >UniRef50_Q01S53 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01S53_SOLUE Length = 116 Score = 72.3 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 14/121 (11%) Query: 24 IQNEEQYTQALELVDHLLLND-----PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMP 78 I++++Q+ ++ + +L+ E L L+ +I + M Sbjct: 2 IEDDKQFDGIMKRLSYLIGKGRSRTPDETKLYKLLDLRIEDYNPK-------YGMPPDSV 54 Query: 79 GGIAVIRTLMDQYGLTLSDL--PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 ++ L+D ++L P G + V L+GKR ++ A+KL + LF Sbjct: 55 TRDEALQFLLDHSEKPANELLAPVFGQRRHVHEALTGKRPISAAPARKLGQILRVKSGLF 114 Query: 137 I 137 + Sbjct: 115 V 115 >UniRef50_B2J9X9 Putative uncharacterized protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J9X9_NOSP7 Length = 131 Score = 72.3 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 14/120 (11%) Query: 22 AGIQNEEQYTQALELVDHLLL----NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I + QA+ L L E LL L+ I +EE+ Sbjct: 20 KIITTNAENEQAIALALTLEHRLNRTSEEEMLLQLLVTLIEQFEETHYPIL--------N 71 Query: 78 PGGIAVIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +++ LMD +T L E +GS + ++++G ++ A+ LA F ++ +LF Sbjct: 72 GTPNSMLVHLMDARDMTTEALAEVLGSLEVALQIVNGG-TISKTQAEALADYFNVNVSLF 130 >UniRef50_B4WWD2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WWD2_9SYNE Length = 114 Score = 71.9 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Query: 50 LDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI-GSKSMVS 108 LD + +I+ + + G+ ++ L+++ L DL +I +++ S Sbjct: 25 LDRMTRQISKQRTMHSLQPRSHNSMPDI-YGVVALKALIEENDLRRRDLSDIFETRANCS 83 Query: 109 RVLSGKRKLTLEHAKKLATRFGISPALFI 137 VL+G++ LT+++ +K+ RF ISP +F Sbjct: 84 EVLAGRQPLTIQNVQKICDRFHISPLVFF 112 >UniRef50_A8YBB5 Similar to tr|Q6YRQ3|Q6YRQ3 n=2 Tax=Microcystis aeruginosa RepID=A8YBB5_MICAE Length = 105 Score = 71.5 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 13/110 (11%) Query: 33 ALELVDHLLLN----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLM 88 E+++ LL E L+++ + I +EE+ + GI +++ ++ Sbjct: 2 MQEVINRLLDKPQLTTEEREYLNVLGSLIYEYEENQEPIPDIY--------GIELLKFIL 53 Query: 89 DQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++ L DL I SKS + + G ++LT + +KLA ISP LF Sbjct: 54 EERNLQKQDLLSIFESKSTLDDIFDGLQELTPIYIQKLANFLNISPDLFF 103 >UniRef50_D1PBN6 Toxin-antitoxin system, antitoxin component, Xre family n=10 Tax=Bacteroidales RepID=D1PBN6_9BACT Length = 120 Score = 70.0 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 18/123 (14%) Query: 26 NEEQYTQALELVDHLL--------LNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 +EQY AL ++ LL ND L L+ + ++E+ Sbjct: 5 TKEQYEFALNRIEDLLPLVTDYTPANDKNAIELTLMSDIVESYEKKHFPI--------GK 56 Query: 78 PGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 P +I +++ +T L EIG S S ++ ++G+ + TL+ A+ L I+PA Sbjct: 57 PSVSELIELSLNEKKMTQKQLASEIGVSPSRINDYVTGRSEPTLKIARLLCKVLNITPAA 116 Query: 136 FID 138 + Sbjct: 117 MLQ 119 >UniRef50_A8ZNL0 Transcriptional regulator containing helix turn helix domain n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZNL0_ACAM1 Length = 109 Score = 68.1 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 14/97 (14%) Query: 22 AGIQNEEQYTQALELVDHLLL-----NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQA 76 I N+ Q A +D L+ E+ LD++ + +E++ + N Sbjct: 21 RPIHNDSQLQAAQNRIDALIDLERELTSDESDYLDILGTLVWEYEQTLEPIPDIN----- 75 Query: 77 MPGGIAVIRTLMDQYGLTLSDL-PEIGSKSMVSRVLS 112 G+ +++ L+++ GL DL P ++S+VS V Sbjct: 76 ---GVELLKVLVEERGLRQKDLVPIFKAESIVSDVFK 109 >UniRef50_A8YMN1 Genome sequencing data, contig C327 n=2 Tax=Microcystis aeruginosa RepID=A8YMN1_MICAE Length = 131 Score = 67.7 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 5/117 (4%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 L I E + + + + L + + + S E E + Sbjct: 18 LKAITTEVENERVIAIAQELEHRSELSLEEEALLEL----LISLIERFEADNYPIPDRNP 73 Query: 81 IAVIRTLMDQYGLTLSDLPEI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 +A +R L++ + +L I GS V ++++G+R + A+ L F + +LF Sbjct: 74 LATLRHLIEANEIEYPELITILGSPDAVEQIINGQRSINQSEARSLGAYFRVDASLF 130 >UniRef50_A3IXK8 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IXK8_9CHRO Length = 96 Score = 66.1 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 11/92 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 + I+NE Y +AL+ ++ L N PE L+++ + +E+ Sbjct: 3 IKPIKNETDYQEALQEIEALFDASINTPEGQKLEILTTLVEVYEQQYYPIEP-------- 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSR 109 P I I ++ +S L E + VS Sbjct: 55 PSPIEAILYHLESRYSDVSVLIEGLKRRGVSE 86 >UniRef50_B5W819 Transcription regulator containing HTH domain-like protein n=2 Tax=Arthrospira RepID=B5W819_SPIMA Length = 100 Score = 65.4 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 11/92 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 L I+ E Y +AL V+ L N + L+++ A I +EE + Sbjct: 3 LKPIKTEADYREALAEVERLFDAPINTDDGDRLEVLTALIEVYEEQHHPI--------EL 54 Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSR 109 P I ++ L + + + VS Sbjct: 55 PSPYEAILYYLESRQLPVLSFIDGLKRRGVSE 86 >UniRef50_B9YPT4 Putative transcription regulator with HTH domain n=1 Tax='Nostoc azollae' 0708 RepID=B9YPT4_ANAAZ Length = 83 Score = 63.4 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 43 NDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDL-PEI 101 + +L L+ +E+ A+++ LM+ G+ + L I Sbjct: 8 TAEQTAILQLLVTLTEEFEK---------NYPMETSSPYAIVQHLMEGRGIKQAQLVGII 58 Query: 102 GSKSMVSRVLSGKRKLTLEHAKKLA 126 SK + S V++GKR ++ AK L Sbjct: 59 SSKGVASEVVNGKRAISKAQAKALG 83 >UniRef50_B2UDQ1 Plasmid maintenance system antidote protein, XRE family n=6 Tax=Proteobacteria RepID=B2UDQ1_RALPJ Length = 376 Score = 61.5 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSK--SMVSRVLSGKRKLTLEHAKKLATRFG 130 + + ++ ++ G T ++ EI K +VS V+SGKR +T E A L G Sbjct: 5 IPAEVFPPGEFLKDELEARGWTQAEFAEIIGKDARLVSEVISGKRSITPETAIALGAALG 64 Query: 131 ISPALFID 138 SP L+++ Sbjct: 65 SSPELWMN 72 >UniRef50_C1DNZ8 Putative uncharacterized protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DNZ8_AZOVD Length = 67 Score = 61.1 bits (147), Expect = 9e-09, Method: Composition-based stats. Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 88 MDQYGLTLSDLP-EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 MDQY D EIG KSMVS VL G RKL+ +H L RF +SPA+F D Sbjct: 1 MDQYQSKTDDFKNEIGGKSMVSMVLGGTRKLSKDHIHALCDRFDLSPAVFFD 52 >UniRef50_A6W328 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W328_MARMS Length = 99 Score = 61.1 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 1 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENP-LLDLVCAKITA 59 M+ +I Q + + P L GI + +++ QAL L++ LL + EN +++ + IT Sbjct: 1 MLVTNEITQMAKAIVTQFPILNGISSIDEHQQALILLEDLLEHYDENLIIIEALSNVITR 60 Query: 60 WEESAPEFAEFNAMAQAMPGGIAVIRTLMDQY 91 +E+ A EF +FN A+ A + L+DQ Sbjct: 61 YEDGAAEFDDFNKRQTAINLTTATLTVLIDQS 92 >UniRef50_Q4C6I0 Putative uncharacterized protein n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C6I0_CROWT Length = 93 Score = 58.0 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 45 PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI-GS 103 + L ++ I +EE++ + G+ +++ L+++ L+ EI S Sbjct: 12 EDREYLRVLGMLIYEYEENSEPIPKLE--------GVELLKALIEEDNLSPQYFLEIFDS 63 Query: 104 KSMVSRVLSGKRKLTLEHAKKLATR 128 + +V VL GKRK+TL AKKL Sbjct: 64 EKVVLDVLQGKRKITLSEAKKLMNF 88 >UniRef50_A3NFB8 Helix-turn-helix domain protein n=5 Tax=Proteobacteria RepID=A3NFB8_BURP6 Length = 334 Score = 57.6 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 93 LTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + +DL P G++S VS VLS KR LT++ + L+ GIS + Sbjct: 1 MRQADLVPYFGTRSRVSEVLSRKRPLTVQMIRALSVGLGISAETLV 46 >UniRef50_D2MK09 Putative uncharacterized protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MK09_9BACT Length = 73 Score = 57.3 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Query: 18 APFLAGIQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEF 67 + ++ E Y AL +D L+ P E+ LD++ + +E Sbjct: 1 MQRIKPVRTEADYQAALARIDELMDAKPGSREDDELDVLADLVELYETKHEPM 53 >UniRef50_C4GIW1 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW1_9NEIS Length = 67 Score = 55.3 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 16 AVAPFLAGIQNEEQYTQALELVDHLLLNDPE------NPLLDLVCAKITAWEESAPEFAE 69 A P L I+NE +Y AL ++ ++P+ + + + A + +E + + Sbjct: 6 ATMPPLKPIRNEAEYRAALAVLSRFFDSNPDAASQESSDYHEALAALVEQYEAAHYPIND 65 >UniRef50_Q07XK7 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07XK7_SHEFN Length = 107 Score = 55.0 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 2 IAIADILQAGEKLTAVAPFLA-GIQNEEQYTQALELVDHLLLNDPEN--PLLDLVCAKIT 58 + I I ++L PF GI ++Y AL + D L + ++ LLD++ I Sbjct: 1 MDIKKIKFLAKELQNALPFGREGIVTPKEYAHALAIADELTDDYKDSYAILLDVLWPPIQ 60 Query: 59 AWEESAPEFAEFN-----AMAQAMPGGIAVIRTLMDQ 90 +E +APEF EFN + A+ + +I++ ++Q Sbjct: 61 RYEGTAPEFIEFNERFARSEAENKKRQVELIKSRLNQ 97 >UniRef50_A9ING0 Hypothetical prophage protein n=2 Tax=Bartonella RepID=A9ING0_BART1 Length = 59 Score = 53.8 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 21 LAGIQNEEQYTQALELVDHLLLN-----DPENPLLDLVCAKITAWEESAPEFAEFNA 72 + I+ E+ Y +ALE+V + N PE + + I A+E + +A Sbjct: 3 IKPIRTEQDYQEALEIVSAMFDNQPQEGTPEFDQMKTLVLLIEAYEAEHYPVSPTHA 59 >UniRef50_C8SJW8 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SJW8_9RHIZ Length = 377 Score = 51.1 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Query: 66 EFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSK--SMVSRVLSGKRKLTLEHAK 123 + ++ +D+ G + ++ EI + ++V+ ++ GKR +T + A+ Sbjct: 2 PRNMTDRTPAYTFPPGEFLKDALDELGWSQTEFAEIIGRKANVVNEIIMGKRSITPDTAR 61 Query: 124 KLATRFGISPALFID 138 ++A +P +++ Sbjct: 62 EIAAALDTTPQYWLN 76 >UniRef50_Q2LSU9 Transcriptional regulator helix turn helix n=10 Tax=Deltaproteobacteria RepID=Q2LSU9_SYNAS Length = 117 Score = 50.3 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 62 ESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTL 119 + + E + + +R L + LT L E+ + +S + +GKR + Sbjct: 40 SESVPWREAFPEYEDKDLPVVCLRALRAKENLTQKQLAELIGIPQRHISEMENGKRPIGK 99 Query: 120 EHAKKLATRFGISPALFI 137 E AK+L + +F+ Sbjct: 100 EMAKRLGKALNVGYKVFL 117 >UniRef50_B8JHN9 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Proteobacteria RepID=B8JHN9_ANAD2 Length = 383 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 79 GGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 ++ L+++ T + L + +K+ +S++++GKR L +E A +LA F + F Sbjct: 6 TPGQLLAELLEERSWTQNVLSVVLGINKATISQIVAGKRDLDVELALRLAEIFDVPVQQF 65 Query: 137 ID 138 +D Sbjct: 66 MD 67 >UniRef50_Q2LU14 Transcriptional regulator, Cro/CI family n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU14_SYNAS Length = 128 Score = 49.6 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 12/106 (11%) Query: 35 ELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLT 94 L D D++ + + + R + G T Sbjct: 26 ALKDEYGDKVKITDDDDVLVNILE---------TPWYKDLKEKTTPGDTTRIYREAKGWT 76 Query: 95 LSDLPEI---GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 L E+ + +S + GKR ++ A+KLA F + FI Sbjct: 77 QEKLGELLGDIPRQHISNMEHGKRPISSNTARKLAKLFNVPMDRFI 122 >UniRef50_C5VKZ3 Addiction module antidote protein, HigA family n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VKZ3_9BACT Length = 371 Score = 49.2 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKK 124 F+ A+ VI+ + + S+L + + +++ V+ GKR LT E A Sbjct: 4 FSFNQAVPFEATHVGEVIKDELSARDMKQSELSGLTGIQRPILNDVIKGKRSLTPEMALL 63 Query: 125 LATRFGISPALFID 138 L IS + Sbjct: 64 LEKVLNISATFLMQ 77 >UniRef50_Q47NX3 Helix-turn-helix motif n=2 Tax=Nocardiopsaceae RepID=Q47NX3_THEFY Length = 444 Score = 48.8 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 M + +R G + +DL +G S+S VSRV++G++ LTL+ +++ R GI Sbjct: 28 DMAALVEAVRL---ARGWSQTDLARTVGYSQSWVSRVVNGQQSLTLDQVREVCERLGIPI 84 Query: 134 ALF 136 L Sbjct: 85 HLL 87 >UniRef50_C2BM45 XRE family plasmid maintenance system antidote protein n=2 Tax=Corynebacterium RepID=C2BM45_9CORY Length = 364 Score = 48.8 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSM--VSRVLSGKRKLTLEHAKKLATRFG 130 +A + ++ +D G T +D E+ + VS ++SGK+++T E A ++ G Sbjct: 5 IAAELFPAGEILADELDTRGWTQADFAEVLGRPAQFVSEIISGKKEITRESAAQIGAALG 64 Query: 131 ISPALFID 138 S +++ Sbjct: 65 TSAEFWLN 72 >UniRef50_D1A8A8 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8A8_THECD Length = 433 Score = 48.4 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKK 124 FA A A ++ + +G T SDL S+S VS+V+ + LT++ ++ Sbjct: 16 FAPAVVNALANCDIPVLLEEIRRAHGWTQSDLAAAVGYSQSWVSKVIRRAQPLTIDQVRE 75 Query: 125 LATRFGISPALF 136 +A R GI L Sbjct: 76 IARRLGIPAGLL 87 >UniRef50_B8CZR2 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR2_HALOH Length = 228 Score = 47.2 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 71 NAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATR 128 + L++ +T ++L + IG SK ++ ++ GK +T E A KL Sbjct: 3 EYYPDIAIPPGETLLELIETNHMTQAELSKRIGFSKKHINEIIKGKAAITAETAIKLENI 62 Query: 129 FGISPALFID 138 F + + +I+ Sbjct: 63 FSLPASFWIN 72 >UniRef50_A8GXR6 Putative transcriptional regulator n=2 Tax=Rickettsia bellii RepID=A8GXR6_RICB8 Length = 71 Score = 47.2 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 18/37 (48%) Query: 102 GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +S VS +L+ KR LTL +KL I + I Sbjct: 28 EPRSRVSEILNKKRTLTLPMIRKLHKELHIPADILIQ 64 >UniRef50_Q0BVE8 Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BVE8_GRABC Length = 138 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 15/124 (12%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEESAPEFAEFNAMAQ 75 I++E A + L+ N+P E+ +L + + + Sbjct: 13 FKPIRDEADLQAARVEMHRLMNNNPEPGSREHEMLGVWAILTGHY--------LASQADP 64 Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 IA+IR M + + L I + +S +L L H + L + Sbjct: 65 KSTDPIALIRNAMAERSIPPRLLSAITRLPEEELSAILRKDIPLHTSHIEALCPALDLPL 124 Query: 134 ALFI 137 + Sbjct: 125 EALL 128 >UniRef50_Q8YT04 Virulence-associated protein n=2 Tax=Nostocaceae RepID=Q8YT04_ANASP Length = 97 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 MA+ ++ + + +T SDL + K+ ++ +++G+R +T + A +L FG Sbjct: 1 MARPPIHPGEILADEITELAMTASDLARVLHVPKNRITEIINGRRGITADTALRLGQYFG 60 Query: 131 ISPALFID 138 +++ Sbjct: 61 TGGEFWLN 68 >UniRef50_A1VX48 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VX48_POLNA Length = 138 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEE 62 + IQNE Y AL++V L+ DP E L+ + + A+E Sbjct: 3 MHSIQNEADYKAALKIVSALVDVDPQRGTLEADRLEALGFLVEAYES 49 >UniRef50_C2KPK0 XRE family plasmid maintenance system antidote protein n=2 Tax=Mobiluncus mulieris RepID=C2KPK0_9ACTO Length = 347 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 82 AVIRTLMDQYGLTLSDLPEIGSKSM--VSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +I M SDL + KS +S +L+GKR L E A + +S + Sbjct: 6 ELITAEMTAKDWNQSDLAAVAGKSKQYISDILNGKRALDAEGAVLIGAALEVSAEELL 63 >UniRef50_Q3JDK5 Transcriptional regulator, XRE family n=9 Tax=Bacteria RepID=Q3JDK5_NITOC Length = 107 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 3/69 (4%) Query: 73 MAQAMPGGIAVIRTL-MDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRF 129 P V+++L ++ GL++++ E +G S+ +S +L+G+ ++ E A +L+ F Sbjct: 2 RMHNPPHPGEVLKSLCLEPLGLSVTEAAEALGVSRKTLSSILNGRAGISPEMAIRLSMAF 61 Query: 130 GISPALFID 138 G S +++ Sbjct: 62 GTSAESWLN 70 >UniRef50_Q5E5S6 Putative uncharacterized protein n=1 Tax=Vibrio fischeri ES114 RepID=Q5E5S6_VIBF1 Length = 65 Score = 45.7 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDP------ENPLLDLVCAKITAWEESAP 65 + I+ E+ Y A+ + L +DP E L+++ A A+E Sbjct: 4 IKPIRTEDDYKAAMARISELTSSDPDALLDNEFDELEVLTALAEAYENEYY 54 >UniRef50_UPI0001A42E87 hypothetical protein PcarcW_20908 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A42E87 Length = 99 Score = 45.3 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 P V+R ++ +T + S+S +SR+L+G +T + A +L Sbjct: 2 HIFNPPHPGEVLRDYIEGVSITQAAFALQISRSRLSRILNGHAPITADMALRLGALVNTR 61 Query: 133 PALFID 138 ++ D Sbjct: 62 AEMWAD 67 >UniRef50_A4U4B9 Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4B9_9PROT Length = 166 Score = 45.3 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKK 124 + + ++R ++ ++ + + V+ +L+G+R +T + A + Sbjct: 3 IPAIDNLPP--VHPGEILRDELEALSMSARKFADHIRVPPNAVTAILNGQRGITAQMALR 60 Query: 125 LATRFGISPALFI 137 L FG P ++ Sbjct: 61 LGQAFGTGPGYWM 73 >UniRef50_Q3KGN2 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KGN2_PSEPF Length = 80 Score = 45.3 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Query: 24 IQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEFA 68 I+N + A ++ L +P + L+ + I +E+ Sbjct: 22 IRNRKDLNIAFARMEKLWGAEPGSSDGNELENLAVLIEQYEKEHYPMP 69 >UniRef50_C4YWS8 HTH_3 family transcriptional regulator protein n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YWS8_9RICK Length = 81 Score = 44.9 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 8/72 (11%) Query: 21 LAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGG 80 + I+ E++Y +AL+ +D+LL + + + + +E + P Sbjct: 3 INIIKTEKEYKEALKELDNLLYTKENSSKAEKLEILVEDYENKHYKI--------EAPDT 54 Query: 81 IAVIRTLMDQYG 92 I I +D Sbjct: 55 IEAINFRIDSLD 66 >UniRef50_Q60C36 DNA-binding protein n=3 Tax=Bacteria RepID=Q60C36_METCA Length = 386 Score = 44.9 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 69 EFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLA 126 + + I ++++ G T ++L +G ++ VS++++GK +T + A +L Sbjct: 5 DAPFAPDWVSPPGDTIADVLEERGWTQAELARRLGYTEKHVSQLINGKAAITEDTASRLE 64 Query: 127 TRFGISPALFI 137 G + ++ Sbjct: 65 RVLGSTAGFWL 75 >UniRef50_B0JI99 Putative uncharacterized protein n=5 Tax=Cyanobacteria RepID=B0JI99_MICAN Length = 73 Score = 44.9 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Query: 2 IAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCA 55 + D+ + + T + P L ++E +Y Q + ++D+L+ N P L++++ Sbjct: 1 MPTIDLEKTRQAWTNLKPILFIPRSESEYEQLVIMLDNLIDEIGENENHPLASLMEILGI 60 Query: 56 KITAWEESAPE 66 I +E+ Sbjct: 61 LIENYEQENVP 71 >UniRef50_B0BGE4 Putative integron gene cassette protein n=2 Tax=Bacteria RepID=B0BGE4_9BACT Length = 128 Score = 44.9 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%) Query: 62 ESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTL 119 + F G ++ + LT DL IG V+ ++ GKR +T Sbjct: 45 RLSWRFEMIPKSRIPTHPGEILLEEFLKPLNLTQVDLAAHIGVPVQRVNEIVRGKRGITP 104 Query: 120 EHAKKLATRFGISPALFID 138 E A + FG +P +I+ Sbjct: 105 ETAWLFSQAFGTTPEFWIN 123 >UniRef50_C6P0T2 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0T2_9PROT Length = 100 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 67 FAEFNAMAQAMPGGIAVIR-TLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAK 123 +A ++R ++ + G+T + + +G S+ VS +L G+R +T + A Sbjct: 1 MDTLRNKKRAPTHPGTLLREVVLPELGITQGEFADRLGVSRRTVSEILHGRRPVTPDMAI 60 Query: 124 KLATRFGISPALFI 137 +L G L++ Sbjct: 61 RLGKLLGNGAGLWL 74 >UniRef50_A3XID6 Virulence-associated protein n=2 Tax=Bacteroidetes RepID=A3XID6_9FLAO Length = 170 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 AV++ + + G T SDL K +S +L+G+R + + + KL F + P F+ Sbjct: 13 PGAVLKRALKKRGTTASDLARTIDEHKQTISAILNGRRAINAKLSIKLGDVFSVQPDYFM 72 >UniRef50_C7M8C3 Putative uncharacterized protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M8C3_CAPOD Length = 77 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 8/58 (13%) Query: 24 IQNEEQYTQALELVDHLL--------LNDPENPLLDLVCAKITAWEESAPEFAEFNAM 73 I+NE QY ++ +D LL NDP+ L ++ + A+EE + Sbjct: 2 IKNELQYNAIMKRIDELLQVVNDDTHENDPDYIELMILTDLVEAYEEIHYPIGNIHKT 59 >UniRef50_C2MAN9 Addiction module antidote protein, HigA family n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MAN9_9PORP Length = 105 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKK 124 F+ A+ VIR ++ + S+L +I +S+++ V+ GKR LT E A Sbjct: 4 FSLNQAVPFESTQVGEVIRDELEARDMKQSELSDITGIQRSILNNVIKGKRALTPEMAVL 63 Query: 125 LATRFGISPALFID 138 + I + ++ Sbjct: 64 IEAALDIPAYVLMN 77 >UniRef50_B8HE38 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Actinomycetales RepID=B8HE38_ARTCA Length = 361 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEIGSKSM--VSRVLSGKRKLTLEHAKKLATRFGISP 133 + ++ + SD +I + VS +++GK+++T E A ++ P Sbjct: 7 EAFPPGESLAEELETRHWSQSDFAQILGRPAQFVSEIIAGKKEITRESAAQIGAALDQPP 66 Query: 134 ALFID 138 +++ Sbjct: 67 QYWLN 71 >UniRef50_B4D5K7 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Bacteria RepID=B4D5K7_9BACT Length = 100 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 83 VIRTLMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +++ M GLT + L V+ ++ GKR +TL + +L FG SP +++ Sbjct: 14 LLQEYMKPMGLTQNALARALGVAPRRVNEIIHGKRAITLNTSLRLGRYFGQSPRFWLN 71 >UniRef50_A9NH52 Addiction module antidote protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NH52_ACHLI Length = 345 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 79 GGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRF-GISPAL 135 +++ M+ +T +L I S+ +S V++GK KLT E A KL F G+ Sbjct: 8 SPGNILKEYMESNNITQKELAAITESSQRHISNVINGKVKLTEEFALKLEKVFKGVKAEF 67 Query: 136 FID 138 ++D Sbjct: 68 WMD 70 >UniRef50_Q93P69 Putative uncharacterized protein n=1 Tax=Microscilla sp. PRE1 RepID=Q93P69_9SPHI Length = 368 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I+ +D+ G++ ++L E +G SK ++ ++ G+ LT + A KL GI + +I Sbjct: 15 PGDTIQETIDEMGMSQAELAERMGRSKEKLNDMIKGREPLTTKTAYKLEKVLGIPASFWI 74 Query: 138 D 138 + Sbjct: 75 N 75 >UniRef50_D1W2R6 DNA-binding protein n=2 Tax=Prevotella RepID=D1W2R6_9BACT Length = 376 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 2/66 (3%) Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 ++R + + G+ D + IG + +S + GKR L + A KL GI Sbjct: 17 PVRAIHPGEILREELRERGIKQKDFAKQIGMQATHLSEFIRGKRNLNDDLAMKLENHLGI 76 Query: 132 SPALFI 137 ++ Sbjct: 77 PYKTWM 82 >UniRef50_A9L235 Putative uncharacterized protein n=1 Tax=Shewanella baltica OS195 RepID=A9L235_SHEB9 Length = 105 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 22 AGIQNEEQYTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEF 67 + ++++Y AL+ ++ L N E L+ + + ++E Sbjct: 57 TPLSSDDEYRAALKKIEGLFDAIPNTAEGSELEKWISLVESYENEHFPM 105 >UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PF89_CLOTS Length = 268 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 82 AVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 AV+R L ++ +T+ + E + V++ LSG+RK + K+LA F + +F Sbjct: 14 AVLRQLKERNNVTIHQIAEAVNVTDGAVAKYLSGERKPNKQVIKRLAEFFHVDQKVF 70 >UniRef50_C9P0V5 Putative uncharacterized protein n=2 Tax=Vibrionaceae RepID=C9P0V5_VIBME Length = 138 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Query: 24 IQNEEQYTQALELVDHLLLNDP---ENPLLDLVCAKITAWEESAPEF 67 I +E +Y L+ ++ + +P E L+ + + A+EE F Sbjct: 92 ILSENEYRMVLKRIETIFDAEPGTPEGDELEKLVTWVEAYEEEHYPF 138 >UniRef50_B0JSE6 Plasmid maintenance system antidote protein n=4 Tax=Bacteria RepID=B0JSE6_MICAN Length = 388 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 69 EFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLA 126 E + + ++++ ++ S+L + +G K ++ ++ GK ++T++ A ++ Sbjct: 9 ENRYAPDFISPPGETLAEILEERNMSQSELAQRMGRPKKTINEIIKGKAEITIDTALQIE 68 Query: 127 TRFGISPALFID 138 G + +I+ Sbjct: 69 LVLGTPASFWIE 80 >UniRef50_Q4C0R2 Putative uncharacterized protein n=2 Tax=Chroococcales RepID=Q4C0R2_CROWT Length = 118 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 12/77 (15%) Query: 22 AGIQNEEQYTQALELVDHLLLN----DPENPLLDLVCAKITAWEESAPEFAEFNAMAQAM 77 I++EE ++++ LL E+ LD++C I +E+ + + Sbjct: 17 RPIKSEEDLEATQKIINQLLDKPQLTAEESDYLDVLCMLIYDYEKDLDIVPDMDQ----- 71 Query: 78 PGGIAVIRTLMDQYGLT 94 I +++ ++ L Sbjct: 72 ---IELLKVSSKEHKLK 85 >UniRef50_B8HS69 Plasmid maintenance system antidote protein, XRE family n=4 Tax=Bacteria RepID=B8HS69_CYAP4 Length = 358 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSM--VSRVLSGKRKLTLEHAKKLATRFG 130 + ++ ++ G T DL EI + + ++ + K+++T E A +LA FG Sbjct: 6 APARVSPPGRILMRELEARGWTQKDLAEITGRPIQTINEITQAKKQITPETALELAEAFG 65 Query: 131 ISPALFID 138 S + + Sbjct: 66 TSAEFWTN 73 >UniRef50_C1SMG1 Plasmid maintenance system antidote protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMG1_9BACT Length = 369 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLP--EIGSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 +P + L+D+ ++ +L S ++ ++ GK + E A K FG Sbjct: 9 YPDYLPHPGETLAELLDEREMSQKELALRTGLSPKAINEIVKGKALPSRETADKFEPIFG 68 Query: 131 ISPALFID 138 +S ++D Sbjct: 69 LSANFWMD 76 >UniRef50_C0QEV8 Putative plasmid maintenance system antidote protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEV8_DESAH Length = 87 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 91 YGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 G++ + L + + +S+++ GKR+++ + A +L FGI P +++ Sbjct: 1 MGISQNQLAKDINVPANRISQIIHGKREISADTALRLGKYFGIEPEFWLN 50 >UniRef50_A8ZWN6 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWN6_DESOH Length = 116 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 70 FNAMAQAMPGGIAVIR-TLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLA 126 N ++R M+ ++++ L + +S +++GKR ++++ A L Sbjct: 2 SNKDFLDPIVPGEILREDFMEPMQISINQLSRDLAVPPNRISEIVNGKRSISVDTALWLE 61 Query: 127 TRFGISPALFID 138 FG+ +++ Sbjct: 62 RYFGVEAQFWLN 73 >UniRef50_B4SCN5 Plasmid maintenance system antidote protein, XRE family n=7 Tax=Bacteria RepID=B4SCN5_PELPB Length = 106 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKK 124 G ++ ++ +T L + V+ +++G+R +T A + Sbjct: 1 MIRIPTHRAPTHPGEMLLEEFLNPMKITQRQLADAIHVPYQRVNEIINGRRGVTPATALR 60 Query: 125 LATRFGISPALFID 138 LA FG+S +++ Sbjct: 61 LAKFFGMSADYWMN 74 >UniRef50_D1W3L4 Addiction module antidote protein, HigA family n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W3L4_9BACT Length = 103 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 77 MPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPA 134 V++ ++ G++ + IG S+++ +L+G+R L+ A G+ Sbjct: 10 PTHPGEVLKDELEARGISQRKFADSIGMGYSVLNEILNGRRSLSTTTALMFEAALGVPAE 69 Query: 135 LFI 137 + Sbjct: 70 SLM 72 >UniRef50_Q46561 Virulence-associated protein A' n=5 Tax=Dichelobacter nodosus RepID=VAPZ_DICNO Length = 115 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 70 FNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLAT 127 + P +I++ +D G+ +++ + +++ +S +++GKR ++ + A KL+ Sbjct: 2 APQRMKNPPHPGLLIKSDLDGLGINITEAAKALDVTRAALSEIINGKRGISAKMAWKLSK 61 Query: 128 RF-GISPALFI 137 F P ++ Sbjct: 62 AFTNSDPEFWL 72 >UniRef50_Q213Q9 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Rhodopseudomonas palustris RepID=Q213Q9_RHOPB Length = 110 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKS-MVSRVLSGKRKLTLEHAKKLATRFGI 131 +++ + L+ + L ++G S ++ +L+G+R +T + A +L FG Sbjct: 1 MAPASHPGRLLKRELGARKLSANRLALDLGVPSGRITDILNGRRSITADTAVRLGRYFGN 60 Query: 132 SPALFID 138 +P ++D Sbjct: 61 APQFWLD 67 >UniRef50_D2L5C8 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5C8_9DELT Length = 118 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 92 GLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 G T +L +G SK++VS + G+R ++ + A KLA FG SP +F+ Sbjct: 70 GWTQIELARRLGVSKTVVSDLEHGRRPISRKMAGKLAEVFGSSPLVFL 117 >UniRef50_C3X7W1 Transcriptional regulator n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X7W1_OXAFO Length = 122 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 +R L + +T L + ++ VS + +G R ++++ AK++ + IS Sbjct: 59 PDANPGMALRGLRAREEITQKQLAAVLGIQQTRVSEMENGVRPISVDMAKRIGKAYNISY 118 Query: 134 ALFI 137 F+ Sbjct: 119 KAFL 122 >UniRef50_Q2RP39 Plasmid maintenance system antidote protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP39_RHORT Length = 111 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 ++R M+ GL+ + L S + +++GKR +T + A +L G P L+ Sbjct: 14 PGRLLRREMEARGLSATALAGALHVSPERIRGIINGKRPITYDTALRLGRYLGTGPELW 72 >UniRef50_A4ESN9 Possible transcriptional regulator, XRE family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESN9_9RHOB Length = 161 Score = 42.2 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Query: 81 IAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + +R + GLT SD+ E KS+VSR+L+GK LTL+ +++ G+ P L Sbjct: 54 VRAVREAKESRGLTQSDIAESMGVDKSVVSRILNGKGNLTLQTIGEISWVLGLRPDLVF 112 >UniRef50_B1KUS7 Transcriptional regulator n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1KUS7_CLOBM Length = 217 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 + P +++T M Q +++ L ++ S + +SR+++ K+ L H + + Sbjct: 12 YITSEPDLGTLLKTYMAQNSMSIRQLSKLSGISSATISRIINEKQDANLNHLQAFSKYLN 71 Query: 131 ISPALFI 137 I + Sbjct: 72 IPMDKLL 78 >UniRef50_Q1VXY8 Putative plasmid maintenance system antidote protein, XRE family n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VXY8_9FLAO Length = 364 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKK 124 + N + +P I ++ ++ +L + + S ++ ++SGK +T+ A + Sbjct: 1 MSRLNDERELLPKPGDTILESIEYLKMSQVELADRMGKTPSKINDLISGKEPITIATALQ 60 Query: 125 LATRFGISPALFID 138 L GI +++ Sbjct: 61 LEKVLGIDAQFWLN 74 >UniRef50_C6CIC0 Putative transcription regulator with HTH domain n=1 Tax=Dickeya zeae Ech1591 RepID=C6CIC0_DICZE Length = 56 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Query: 24 IQNEEQYTQALELVDHLLLNDP-----ENPLLDLVCAKITAWEESAPEF 67 I+ EE+Y AL +V + ++P E +C++I +E Sbjct: 7 IETEEEYLAALRVVSPMFDDEPPINTPEGDFFAALCSRIAEYEAKHFPL 55 >UniRef50_B8FJF9 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJF9_DESAA Length = 368 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 71 NAMAQAMPGGIAVIRTLMDQYGLTLSDLP--EIGSKSMVSRVLSGKRKLTLEHAKKLATR 128 + + V+ +D YG+T ++L SK ++ ++ GK +T E A K Sbjct: 8 EYLPDYLTSPGEVLEDYLDAYGMTQAELALRTGLSKKTINEIIKGKSPITPETALKFERP 67 Query: 129 FGISPALF 136 G + Sbjct: 68 LGRPAHFW 75 >UniRef50_B1YHK9 Transcriptional regulator, XRE family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHK9_EXIS2 Length = 294 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 84 IRTLMDQYGLTLSDL-PEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I+ + + T S+L I S++ +S++ +G+ T++ +++A RF + + F Sbjct: 12 IKRIRQERNWTQSELCQGICSQAEISKIENGRNSPTVDLLQQIAERFHVPVSSFF 66 >UniRef50_B7C7K4 Putative uncharacterized protein (Fragment) n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7K4_9FIRM Length = 175 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 + I+ ++ G+T + S+ +S++++G+ LT E A KL GI + Sbjct: 24 TPPGSTIKEQLEDRGMTQKEFAARLDMSEKHISKLINGEVILTAEMAVKLEMVLGIPASF 83 Query: 136 FID 138 + + Sbjct: 84 WTN 86 >UniRef50_C3Q3M0 Helix-turn-helix domain-containing protein n=5 Tax=Bacteroides RepID=C3Q3M0_9BACE Length = 371 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +I+ +D + +L S+++ ++ G+R +T E A L I + ++ Sbjct: 18 PGEIIKDELDAREMKQKELASFMGMPTSVLNDIIKGRRAITPEVAVLLQEILSIDASYWL 77 >UniRef50_C6SQ36 Plasmid maintenance system antidote protein n=1 Tax=Streptococcus mutans NN2025 RepID=C6SQ36_STRMN Length = 97 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFG 130 MA A+ + L+ + + SD E IG S+ VS +L+ K+ L + A ++ G Sbjct: 1 MASAVTSAADTLSELLAYHHIKQSDFAERIGVSQKHVSDLLNRKKFLNADLAVRVEQVTG 60 Query: 131 ISPALFI 137 + + Sbjct: 61 LPAEFLL 67 >UniRef50_C9L320 Toxin-antitoxin system, antitoxin component, Xre family n=9 Tax=Bacteroidales RepID=C9L320_9BACE Length = 114 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 2/74 (2%) Query: 65 PEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHA 122 P+ N +I+ ++ G++ L + S ++V+ +++ KR + ++A Sbjct: 9 PKMIANNIDPYEPTHPGELIKDEIEFRGISQKKLADRMGASYTVVNDIINCKRAVNPQYA 68 Query: 123 KKLATRFGISPALF 136 GI + Sbjct: 69 LLFEAALGIPAHIL 82 >UniRef50_A7B981 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B981_9ACTO Length = 87 Score = 41.5 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Query: 88 MDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 ++ +G+T L S ++ ++ GKR +T + A +L+ FG +P ++++ Sbjct: 5 IEGFGITQYKLAVAISVPPRRINEIVHGKRGITADTAMRLSRYFGTTPGVWMN 57 >UniRef50_D2L592 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L592_9DELT Length = 101 Score = 41.1 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++ ++ ++ + L + +S+VL G+R +T + A++LA FG +P ++ Sbjct: 7 PGEILAEELEALHMSANQLAGYLKVPANRISQVLRGQRTVTADTARRLARFFGTTPQYWM 66 Query: 138 D 138 + Sbjct: 67 N 67 >UniRef50_B4SEV6 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SEV6_PELPB Length = 128 Score = 41.1 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 79 GGIAVIRTLMDQYGLTLSDL-PEIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 GI +++ ++ GL+ L IG ++ ++ GKR ++ A LA F SP + Sbjct: 43 PGIILLKEFIEPLGLSQKALSAHIGIPVQRINEIVCGKRGVSPNTAWLLAGAFNTSPEFW 102 Query: 137 ID 138 ++ Sbjct: 103 LN 104 >UniRef50_A5L1S4 Putative uncharacterized protein n=3 Tax=Vibrionales RepID=A5L1S4_9GAMM Length = 83 Score = 41.1 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 26 NEEQYTQALELVDHLLL----NDPENPLLDLVCAKITAWEESAPEF 67 +E Y L+ ++ L P+ L+ + + +EE F Sbjct: 38 SESDYKAVLKRIESLFDVAEPGTPKGDELEKLVIWVEGYEEDHFPF 83 >UniRef50_Q2BCU9 Helix-turn-helix domain protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BCU9_9BACI Length = 212 Score = 41.1 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 83 VIRTLMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +++ L+ + L++ L ++ +++S++++GKRK T EH ++ A + + + Sbjct: 11 LLKGLLKERSLSMRKLGQLAGIDPAVISKIVNGKRKATPEHLQRFAEHLNVPISRLYE 68 >UniRef50_B0JR11 Plasmid maintenance system antidote protein n=10 Tax=Bacteria RepID=B0JR11_MICAN Length = 117 Score = 41.1 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Query: 73 MAQAMPGGIAVIRT-LMDQYGLTL----SDLPEIGSKSMVSRVLSGKRKLTLEHAKKLAT 127 +++ ++ +T DL +++ + +L+GKR +T + A +L+ Sbjct: 19 HRLPNIHPGEILKLDFLEPLNITPYRLSKDLSV--AQTRIGEILAGKRSITADTALRLSR 76 Query: 128 RFGISPALFID 138 FG SP +++ Sbjct: 77 YFGNSPQFWLN 87 >UniRef50_UPI0001BCFAA1 putative plasmid maintenance system antidote protein n=1 Tax=Mannheimia haemolytica serotype A2 str. BOVINE RepID=UPI0001BCFAA1 Length = 125 Score = 41.1 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 72 AMAQAMPGGI-AVIRT-LMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLAT 127 M Q P I +++ ++ L + DL EI + ++ S +++ +++ E A KLA Sbjct: 19 NMMQRKPTPIGEILQEEFLEPLNLKIGDLAEILAVHRNTASNIVNNSCRVSPEMAFKLAK 78 Query: 128 RFGISPALFID 138 F SP +++ Sbjct: 79 AFDTSPEFWLN 89 >UniRef50_C7R1U5 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R1U5_JONDD Length = 117 Score = 41.1 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 71 NAMAQAMPGGIAVI-RTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLAT 127 A ++ ++ +G+T L IG ++ ++ GKR ++ + A +LA Sbjct: 20 EADRIETIYPGEILMEDFIEGFGITQKKLAVSIGVPPRRINEIVHGKRGISEDTAIRLAR 79 Query: 128 RFGISPALFID 138 FG S +++ Sbjct: 80 YFGTSEEFWMN 90 >UniRef50_A1BHT8 Plasmid maintenance system antidote protein, XRE family n=3 Tax=Chlorobium/Pelodictyon group RepID=A1BHT8_CHLPD Length = 368 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + ++ G+T ++L E +G K ++ ++ GK ++T E A +L I ++ Sbjct: 18 PGDTLAEHLEYTGMTQAELAERMGRPKKTINEIIQGKAQITPETALQLERVVSIPADFWM 77 Query: 138 D 138 + Sbjct: 78 E 78 >UniRef50_B1YM75 Helix-turn-helix domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YM75_EXIS2 Length = 294 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 83 VIRTLMDQYGLTLSDLPE-IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +R L ++ LT DL I S++ +S++ SG T++ L+ R + F+D Sbjct: 12 ALRRLRKKHNLTQKDLANGICSQAEISKIESGTHSPTVDLLYALSRRLQVPINTFLD 68 >UniRef50_Q2RPT2 Plasmid maintenance system antidote protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPT2_RHORT Length = 95 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 73 MAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFG 130 MA + + + G+++S L +S ++ +++GKR +T + A +LA FG Sbjct: 1 MALPPLHPGEFLADELTEIGVSVSALARALDVPQSRMADIVAGKRSVTADTALRLAAYFG 60 Query: 131 ISPALFID 138 S L+++ Sbjct: 61 TSARLWLN 68 >UniRef50_C8VW53 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VW53_DESAS Length = 373 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 76 AMPGGIAVIRTLMDQYGLTLSDLPEIGSK--SMVSRVLSGKRKLTLEHAKKLATRFGISP 133 A+P G+ ++ TL + G+T +DL + + ++ ++ GK +T E A +L G+ Sbjct: 19 AIPPGVTLLETL-EHLGMTQADLAKRTGRPVKTINEIIKGKSAITPETALQLERVLGVPA 77 Query: 134 ALF 136 + Sbjct: 78 TFW 80 >UniRef50_C6MLY0 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Geobacter sp. M18 RepID=C6MLY0_9DELT Length = 124 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 61 EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLT 118 EE E + A GG IR + GLT L + ++ +S + +GKR + Sbjct: 46 EEKEVYTPEEVSPELAWNGGGVAIRGARGKEGLTQKQLAQRTGIAQHHISEMENGKRPIG 105 Query: 119 LEHAKKLATRFGISPALFI 137 + A++LA I +F+ Sbjct: 106 KDTARRLADALNIDYRVFL 124 >UniRef50_Q2BLI6 Plasmid maintenance system antidote protein, XRE family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLI6_9GAMM Length = 100 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 23/36 (63%) Query: 103 SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 S+ V+ +++G+R ++ + A KLA F +P +++ Sbjct: 43 SRRRVNEIVNGQRSISADTALKLARFFHTTPMFWLE 78 >UniRef50_A5UQA7 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A5UQA7_ROSS1 Length = 75 Score = 40.7 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 6/70 (8%) Query: 3 AIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLL------NDPENPLLDLVCAK 56 ++ A A+A + +E +Y + + L+D L+ N L++++ Sbjct: 1 MATELQTAERVWPALASIVFVPHSESEYQRLVGLLDALIDVVGEDENHSLASLMEVIGVL 60 Query: 57 ITAWEESAPE 66 I +E Sbjct: 61 IEKYEGEHVP 70 >UniRef50_B2VB72 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=B2VB72_ERWT9 Length = 105 Score = 40.7 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 76 AMPGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISP 133 P +I ++ + L L E+G S S +S+V SGK +T E A +L GI+ Sbjct: 5 NPPHPGGLISEYIEDNNIGLRVLAKELGVSPSALSKVASGKASVTPEMAVRLEAGLGIAA 64 Query: 134 ALFI 137 L++ Sbjct: 65 RLWL 68 >UniRef50_B4AH10 Conserved membrane protein YkvA n=2 Tax=Bacillus pumilus RepID=B4AH10_BACPU Length = 211 Score = 40.3 bits (93), Expect = 0.017, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Query: 82 AVIRTLMDQYGLTLSDLP---EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++++ + Q L+L +L EI K+ +SR+++GKRK TL H ++L+ +S + Sbjct: 10 SLLKERLQQRSLSLRELSTYTEI-DKATLSRIMNGKRKPTLNHLQRLSDSLNLSLDQLL 67 >UniRef50_C8NS57 HigA family addiction module antidote protein n=16 Tax=Bacteria RepID=C8NS57_COREF Length = 105 Score = 40.3 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 83 VIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++ M+ GL+ + L +G ++ ++ GKR +T + A +LA G P ++ Sbjct: 7 LLEEFMEPLGLSQNGLARALGVPPRRINEIVHGKRAITADTALRLAAYLGPDPQFWM 63 >UniRef50_C8WNM3 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNM3_EGGLE Length = 106 Score = 40.3 bits (93), Expect = 0.022, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 84 IRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + ++ +T L E S++++SR L G+R TL+ +L+ +S + Sbjct: 31 LAAALEGRAMTARKLAEFSGVSEAVISRTLHGQRTPTLDAIVRLSLTLNVSADYLL 86 >UniRef50_Q07I76 Plasmid maintenance system antidote protein, XRE family n=6 Tax=Bacteria RepID=Q07I76_RHOP5 Length = 106 Score = 39.9 bits (92), Expect = 0.022, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 76 AMPGGIA-VIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 P ++ + GL+ + L S ++ ++ GKR +T + +LA FG+S Sbjct: 15 PNPHPGEILLEEFLKPMGLSQNGLARAVHVSPRRINEIVLGKRDITADTDLRLARYFGVS 74 Query: 133 PALFI 137 +F+ Sbjct: 75 EGMFL 79 >UniRef50_B4TEJ2 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Enterobacteriaceae RepID=B4TEJ2_SALHS Length = 360 Score = 39.9 bits (92), Expect = 0.025, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Query: 67 FAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVS--RVLSGKRKLTLEHAKK 124 + + I LMD++GL+ +L + S++ ++L GK +L A K Sbjct: 2 IVTQDFQPDWVSPPGDTIIDLMDEHGLSGEELSKRIGLSLIRGQQLLEGKIRLNESLACK 61 Query: 125 LATRFGISPALFI 137 L F +S +I Sbjct: 62 LEELFNVSTDFWI 74 >UniRef50_C6XEC2 Putative phage repressor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEC2_METSD Length = 226 Score = 39.9 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 83 VIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +I+ ++ G T + L E S + VS+ ++G +++ E+ +K+A G+ + ++ Sbjct: 7 LIKEALEHQGKTQAWLAEFCGVSNNAVSKWINGSGQISRENIRKVANALGLRASELLN 64 >UniRef50_C4XT67 Xre family DNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XT67_DESMR Length = 110 Score = 39.9 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 3/89 (3%) Query: 51 DLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGS--KSMVS 108 D V + A E++ G +R + +T + L KS +S Sbjct: 23 DRVDDVVRAIEKALEPDIPAEEAFAG-FGPGDALRGMRRLREMTQAQLAAAIGVHKSHIS 81 Query: 109 RVLSGKRKLTLEHAKKLATRFGISPALFI 137 + G+R + E AK+LA S +F+ Sbjct: 82 GMERGRRPIGKEMAKRLADALNTSYKVFL 110 >UniRef50_A5G5W2 Plasmid maintenance system antidote protein, XRE family n=4 Tax=Proteobacteria RepID=A5G5W2_GEOUR Length = 104 Score = 39.5 bits (91), Expect = 0.030, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 67 FAEFNAMAQAMPGGIAVIR-TLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAK 123 A++R M YGLT++ L E S+ ++ +L +R LT A Sbjct: 3 IKNKGKRELPPTHPGAMLREDFMPGYGLTVTTLAETLGVSRQTINELLRERRALTPAMAL 62 Query: 124 KLATRFGISPALFID 138 +L+ FG SP +++ Sbjct: 63 RLSRLFGNSPEFWLN 77 >UniRef50_C4FMN1 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FMN1_9FIRM Length = 287 Score = 39.5 bits (91), Expect = 0.030, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 79 GGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALF 136 I+ +++ +T +L S+ +S++++G+ LT + A +L FG+ + + Sbjct: 13 PPGMTIKEVLEDRHMTQKELATRMDMSEKHISKLINGEVPLTQDVAMRLERVFGVEASFW 72 >UniRef50_C6LFA5 Addiction module antidote protein, HigA family n=2 Tax=Clostridiales RepID=C6LFA5_9FIRM Length = 365 Score = 39.5 bits (91), Expect = 0.031, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLP--EIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 I +++ G++ ++L S + VS V++GK+ ++ A L GI + ++ Sbjct: 16 PGETIADVLENRGISQAELALRTGVSAAYVSNVIAGKKGISAGFASGLEYALGIPGSFWL 75 Query: 138 D 138 + Sbjct: 76 N 76 >UniRef50_B3Q7W2 Plasmid maintenance system antidote protein, XRE family n=6 Tax=Proteobacteria RepID=B3Q7W2_RHOPT Length = 101 Score = 39.5 bits (91), Expect = 0.033, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 72 AMAQAMPGGIAVIRTLMDQYGLTLSDLP-EI-GSKSMVSRVLSGKRKLTLEHAKKLATRF 129 +P G +I M G++ + L +I + + V+ ++ G+ +T A +LA F Sbjct: 5 KQLPPIPPGEILIEEFMRPNGISQNRLARDIDINPARVNDIVHGRSAITAAVALRLAKYF 64 Query: 130 GISPALFID 138 G +P L+++ Sbjct: 65 GTTPELWMN 73 >UniRef50_C9RP82 Transcriptional regulator, XRE family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RP82_FIBSS Length = 138 Score = 39.5 bits (91), Expect = 0.036, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 69 EFNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLA 126 ++N A IR G T + L ++G S +S + +R ++ + A KL+ Sbjct: 66 DWNKRMSAEMTPGKAIRADRGLRGWTQNVLAQKLGISIQNLSAMEHDRRPVSKKMAAKLS 125 Query: 127 TRFGISPALFI 137 F + P + Sbjct: 126 QIFDVPPETYF 136 >UniRef50_B4AWI0 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=B4AWI0_9CHRO Length = 78 Score = 39.2 bits (90), Expect = 0.039, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 84 IRTLMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +R L GL+ L ++ + +S + V G+R ++L + KK+A GISP F D Sbjct: 17 LRYLRQTRGLSQEALADLCNLDRSYIGGVERGERNISLLNIKKIADALGISPKEFFD 73 >UniRef50_B2IWM0 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Nostoc punctiforme PCC 73102 RepID=B2IWM0_NOSP7 Length = 103 Score = 39.2 bits (90), Expect = 0.039, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPEIGSKSM--VSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 VI ++D + ++ EI S + V++G+R +T++ A +L G P L++ Sbjct: 18 PGEVIADILDDLDINTANFAEILGVSNQTIQEVINGQRSITVDIAIRLGKALGNGPRLWL 77 Query: 138 D 138 + Sbjct: 78 N 78 >UniRef50_Q04QE9 Putative uncharacterized protein n=2 Tax=Leptospira borgpetersenii serovar Hardjo-bovis RepID=Q04QE9_LEPBJ Length = 129 Score = 39.2 bits (90), Expect = 0.047, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 83 VIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +++ LM + G DL + G + VSR LSG TL L I P +F+ Sbjct: 6 ILKDLMSRKGWNQEDLAKAGEVKQPTVSRYLSGHTIPTLTFVVNLYKNEKIDPIIFV 62 >UniRef50_B8ECS9 Putative transcription regulator with HTH domain protein n=1 Tax=Shewanella baltica OS223 RepID=B8ECS9_SHEB2 Length = 91 Score = 39.2 bits (90), Expect = 0.048, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 3/41 (7%) Query: 30 YTQALELVDHLLL---NDPENPLLDLVCAKITAWEESAPEF 67 Y AL+ ++ L N E L+ + + ++E Sbjct: 51 YRAALKRIEELFDALPNTAEGDELEKWISLLESYENDHFPM 91 >UniRef50_A0R9D5 Transcriptional regulator n=76 Tax=Bacillales RepID=A0R9D5_BACAH Length = 231 Score = 38.8 bits (89), Expect = 0.049, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 83 VIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 +I+ L+ + L++ L + + +SR+++GK+ +H +K A + P L D Sbjct: 27 LIKKLLKERALSMRQLGMLTNIDPATISRIMNGKQPPKQKHLQKFAECLQVPPQLLFD 84 >UniRef50_D2MJ41 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJ41_9BACT Length = 87 Score = 38.8 bits (89), Expect = 0.052, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 + G + M + GL + L + S ++ +++G+R ++ A L + G Sbjct: 6 PLPLHPGKVLSEIYMTEMGLNQTRLAKRCGCSTGKINEIVNGRRGISPAFAIALESALGT 65 Query: 132 SPALFI 137 S +++ Sbjct: 66 SAEMWV 71 >UniRef50_A5GB28 Plasmid maintenance system antidote protein, XRE family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GB28_GEOUR Length = 385 Score = 38.8 bits (89), Expect = 0.053, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 + I L++++G ++L + + +S +++GK +T + A KL G Sbjct: 30 PDWISPPGETILDLLEEHGWKQTELAKRTGYTTKHISLLINGKAPITEDTAIKLERVVGS 89 Query: 132 SPALFI 137 + ++ Sbjct: 90 TAHFWL 95 >UniRef50_Q831G5 Transcriptional regulator, Cro/CI family n=1 Tax=Enterococcus faecalis RepID=Q831G5_ENTFA Length = 126 Score = 38.8 bits (89), Expect = 0.054, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 84 IRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 ++ L + G+ S+L EI +S +S + + E KK+A F +S +D Sbjct: 7 LKQLRTKKGIKQSELAEILHLRQSSISDYENNRSTPNPETIKKIAEYFNVSANYLLD 63 >UniRef50_C8PMY3 Helix-turn-helix domain protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMY3_9SPIO Length = 120 Score = 38.8 bits (89), Expect = 0.057, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 2/94 (2%) Query: 46 ENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG--S 103 E + E E+ A+ +R + + T + L E S Sbjct: 27 ETSYKKYLTVNDEKDEYVEATSMEWFKEAEKRQTPANTLRFYRNLHKFTQAQLAERLHTS 86 Query: 104 KSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 + +S + +G++ ++ + A LA F I FI Sbjct: 87 RQFISNMETGQKPISRKTANILAEIFNIDAGRFI 120 >UniRef50_B8FLP7 Helix-turn-helix domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FLP7_DESAA Length = 376 Score = 38.8 bits (89), Expect = 0.058, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Query: 89 DQYGLTLSDLPE---IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 D G T DL + + VS + +GKR L E L+ FID Sbjct: 21 DAKGWTQDDLARGLGLKDRQSVSDIENGKRALKPEELVALSDILDREVEFFID 73 >UniRef50_C4Z256 Putative uncharacterized protein n=3 Tax=Bacteria RepID=C4Z256_EUBE2 Length = 350 Score = 38.8 bits (89), Expect = 0.059, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 78 PGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL 135 A I+ ++ G++ + ++ VS++++G+ +LT E A +L G+ Sbjct: 10 TPPGATIKEQLNDRGMSQKEFAVRIDMTEKHVSKLINGEVQLTPEVAVRLEIVLGVPARF 69 Query: 136 F 136 + Sbjct: 70 W 70 >UniRef50_Q73N51 DNA-binding protein n=1 Tax=Treponema denticola RepID=Q73N51_TREDE Length = 72 Score = 38.8 bits (89), Expect = 0.061, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 69 EFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE-IG-SKSMVSRVLSGKRKLTLEHAKKLA 126 ++ A+ +R LT L E +G +K +S + +G++ ++ + A L+ Sbjct: 2 DWYKEAEKRQTPAKTLRFYRTLNKLTQVQLAEKLGVTKQFISNMETGQKPISRKTAYLLS 61 Query: 127 TRFGISPALFI 137 FGI FI Sbjct: 62 EIFGIDAGRFI 72 >UniRef50_B8F404 Plasmid maintenance system antidote protein, XRE family/addiction module antidote protein, HigA family/PSEEN1946 proteic killer active protein n=4 Tax=Gammaproteobacteria RepID=B8F404_HAEPS Length = 90 Score = 38.8 bits (89), Expect = 0.063, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%) Query: 80 GIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++R ++ Y +T ++ +SR+L+GK ++ E A +L+ SP L++ Sbjct: 9 PGLILREYIEGYNVTEVAKRLGVTRVTLSRILNGKAAISPEMALRLSQLLKTSPELWL 66 >UniRef50_Q02B76 Plasmid maintenance system antidote protein, XRE family n=2 Tax=Bacteria RepID=Q02B76_SOLUE Length = 116 Score = 38.4 bits (88), Expect = 0.065, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 72 AMAQAMPGGIAVIRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRF 129 + G ++ M G++++ L + + +++G R +T + A +L T F Sbjct: 5 KRLDPIHPGEILLEEFMKPLGISINQLARDLDVPPNRIGAIVNGTRSITADTALRLGTYF 64 Query: 130 GISPALFI 137 +SP ++ Sbjct: 65 DVSPETWL 72 >UniRef50_C2BKB1 Plasmid maintenance system antidote protein n=4 Tax=Corynebacterium RepID=C2BKB1_9CORY Length = 110 Score = 38.4 bits (88), Expect = 0.068, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 69 EFNAMAQAMPGGIAVIRT-LMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKL 125 E + + V+R ++ GLT L + SKS +S+++ G+ ++ E A +L Sbjct: 11 EEASDIVPVSHPGEVLREEFLEPLGLTQYRLAKDIFSSKSQISKLVRGRIGISAEMALRL 70 Query: 126 ATRFGISPALFI 137 + FG S ++ Sbjct: 71 SAYFGNSAEFWL 82 >UniRef50_Q5P6T0 Plasmid maintenance system antidote protein n=2 Tax=Proteobacteria RepID=Q5P6T0_AZOSE Length = 105 Score = 38.4 bits (88), Expect = 0.072, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 83 VIRTLMDQYGLTLSDLP-EI-GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 ++ + G+T L +I S S +S ++ G+R +T + A +L FG+ P +++ Sbjct: 16 LLEDFLRPMGITARQLAADIDVSPSRISELVHGRRPITADTALRLGLFFGMEPRFWLN 73 >UniRef50_C2WX77 Helix-turn-helix domain protein n=1 Tax=Bacillus cereus Rock4-2 RepID=C2WX77_BACCE Length = 214 Score = 38.4 bits (88), Expect = 0.074, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 84 IRTLMDQYGLTLSDLPEI--GSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID 138 + LM + +T L E+ S++ V R +G+R + ++A +S FID Sbjct: 8 LSQLMKKNNMTDEQLAELLSVSRTTVLRWRNGERSPKMSKISQIAKILNVSATYFID 64 >UniRef50_A1AN18 Plasmid maintenance system antidote protein, XRE family n=4 Tax=Deltaproteobacteria RepID=A1AN18_PELPD Length = 120 Score = 38.4 bits (88), Expect = 0.076, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 70 FNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE--IGSKSMVSRVLSGKRKLTLEHAKKLAT 127 F V+R + LT L E + +S + GKR++ E AKKLA Sbjct: 51 FVKTFPGETKPAVVLRGSRGRENLTQKQLAEATGIPQRHISEMEHGKREIGKERAKKLAA 110 Query: 128 RFGISPALFI 137 LF+ Sbjct: 111 ALHCDYRLFL 120 >UniRef50_B9YKN8 Transcriptional regulator containing helix turn helix domain n=3 Tax=Cyanobacteria RepID=B9YKN8_ANAAZ Length = 80 Score = 38.4 bits (88), Expect = 0.076, Method: Composition-based stats. Identities = 6/51 (11%), Positives = 18/51 (35%), Gaps = 4/51 (7%) Query: 22 AGIQNEEQYTQALELVDHLLLND----PENPLLDLVCAKITAWEESAPEFA 68 I NE++ ++ +L + L ++ + +E+ + Sbjct: 22 RPITNEQELIATQNKINSILDKGNITQDDVDYLKVLGTHVYDYEQQHEKMP 72 >UniRef50_C1SHA1 Addiction module antidote protein, HigA family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHA1_9BACT Length = 100 Score = 38.4 bits (88), Expect = 0.079, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 4/76 (5%) Query: 67 FAEFNAMAQAMPGGIAVIR--TLMDQYGLTLSDLPEIGSKS--MVSRVLSGKRKLTLEHA 122 + + + + + +++ + D GLT L S ++++ + R +T E A Sbjct: 1 MFDRSKITRELSHPGEILKDIYIADTPGLTQQKLAYALGVSFRTINQICNKHRGVTPEVA 60 Query: 123 KKLATRFGISPALFID 138 +LA F SP L+++ Sbjct: 61 VRLAKYFNTSPELWLN 76 >UniRef50_D0TRF9 HigA family addiction module antidote protein n=6 Tax=Bacteroides RepID=D0TRF9_9BACE Length = 104 Score = 38.4 bits (88), Expect = 0.082, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 80 GIAVIRTLMDQYGLTLSDLPEIGSKS--MVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 +I+ + G++ E+ S M++ +L+G+R ++ + A + I+ + + Sbjct: 13 PGEIIKEELQSRGISQKRFAEVVGVSYTMLNDILNGRRPVSTDFALLIEAATNINAEMLM 72 Query: 138 D 138 + Sbjct: 73 N 73 >UniRef50_A5CUZ3 Putative plasmid maintenance system, antidote protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CUZ3_CLAM3 Length = 367 Score = 38.0 bits (87), Expect = 0.085, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 66 EFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAK 123 + +A +P +R +D ++ + S V+++L G+ +T E A Sbjct: 4 PIQDIPYIATEVPPPGETLRETLDALDMSQVQFAQRCGLSTKHVNQILQGQSAVTPETAL 63 Query: 124 KLATRFGISPALF 136 + G+ + Sbjct: 64 LIERVTGVPARFW 76 >UniRef50_C7H2B1 Toxin-antitoxin system, antitoxin component, Xre family n=4 Tax=Faecalibacterium prausnitzii RepID=C7H2B1_9FIRM Length = 276 Score = 38.0 bits (87), Expect = 0.093, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 84 IRTLMDQYGLTLSDLP-EIG-SKSMVSRVLSG-KRKLTLEHAKKLATRFGISPALFI 137 + LM ++ ++ +L EIG SKS ++R +SG K LT E K+A F +S + Sbjct: 14 LADLMKEHNISQPELAKEIGCSKSTINRFISGAKGTLTHEQVLKIARLFNVSTDFLL 70 >UniRef50_B7DVG5 Transposase IS3/IS911 family protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DVG5_9BACL Length = 201 Score = 38.0 bits (87), Expect = 0.094, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 82 AVIRTLMDQYGLTLSDLPEIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++R L ++ LT +DL G S +++S SG+R T E LA R ++ +F Sbjct: 8 EILRRLREERNLTQADLAGNGISWALISLYESGRRTPTYETLAYLAERLQVAVDIFF 64 >UniRef50_UPI00019687ED hypothetical protein BACCELL_00676 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019687ED Length = 362 Score = 38.0 bits (87), Expect = 0.096, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 74 AQAMPGGIAVIRTLMDQYGLTLSDLPEIG--SKSMVSRVLSGKRKLTLEHAKKLATRFGI 131 +++ + + G++ + + S +S ++ GKR +T+ A K GI Sbjct: 10 PFMATHPGRILKNELIERGISQKNFAKSVDMQPSHISEIIKGKRSVTMMIADKFEAVLGI 69 Query: 132 SPALFID 138 +++ Sbjct: 70 PSISWVN 76 >UniRef50_UPI000066D8A2 UPI000066D8A2 related cluster n=1 Tax=unknown RepID=UPI000066D8A2 Length = 77 Score = 38.0 bits (87), Expect = 0.096, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 83 VIRTLMDQYGLTLSDLPEIGS--KSMVSRVLSGKRKLTLEHAKKLATRFGISPALFI 137 ++ + Q G++ +L ++ ++ +S V G R ++L + K+ I + F Sbjct: 14 TLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFF 70 >UniRef50_C3PKW0 HTH-type transcriptional regulator n=12 Tax=Bacteria RepID=C3PKW0_CORA7 Length = 142 Score = 38.0 bits (87), Expect = 0.099, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 76 AMPGGIAVI-RTLMDQYGLTLSDLP-EIG-SKSMVSRVLSGKRKLTLEHAKKLATRFGIS 132 ++ + G+T L IG ++ ++ GKR +T + A +LA F +S Sbjct: 48 PPVHPGEILMEDFLKGMGITQHKLAVSIGVPPRRINEIVHGKRAVTADTALRLAKFFEMS 107 Query: 133 PALFI 137 P ++ Sbjct: 108 PQFWL 112 >UniRef50_A7BXQ3 Transcriptional regulator, Cro/CI family n=1 Tax=Beggiatoa sp. PS RepID=A7BXQ3_9GAMM Length = 177 Score = 38.0 bits (87), Expect = 0.099, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 70 FNAMAQAMPGGIAVIRTLMDQYGLTLSDLP-EIGSKSM--VSRVLSGKRKLTLEHAKKLA 126 + A I+ + + LT ++L ++G + +S + +R++ E A+KL+ Sbjct: 104 WYQQISATITAGDAIKVYRENHNLTTAELGNKLGGLTAYEISEMEDNQREINFEVAEKLS 163 Query: 127 TRFGISPALFI 137 F + F+ Sbjct: 164 QLFEVPIERFL 174 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.145 0.361 Lambda K H 0.267 0.0448 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 744,733,672 Number of Sequences: 3077464 Number of extensions: 26870251 Number of successful extensions: 115012 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 218 Number of HSP's successfully gapped in prelim test: 253 Number of HSP's that attempted gapping in prelim test: 114349 Number of HSP's gapped (non-prelim): 477 length of query: 138 length of database: 1,040,396,356 effective HSP length: 102 effective length of query: 36 effective length of database: 726,495,028 effective search space: 26153821008 effective search space used: 26153821008 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 87 (38.0 bits)