BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (207 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AAP6 Uncharacterized protein yaiV n=77 Tax=Enterobact... 427 e-118 UniRef50_UPI00017F30F5 putative DNA-binding transcriptional regu... 215 6e-55 UniRef50_C9XX32 Putative uncharacterized protein n=2 Tax=Cronoba... 179 5e-44 UniRef50_B5BLI5 Putative uncharacterized protein n=34 Tax=Salmon... 109 6e-23 UniRef50_B5BAM2 Putative transcriptional regulator protein n=33 ... 99 9e-20 UniRef50_A8GI54 Putative transcriptional regulator, Crp/Fnr fami... 99 9e-20 UniRef50_C1M4J5 CRP/FNR family transcriptional regulator n=6 Tax... 96 1e-18 UniRef50_UPI00019F1C16 hypothetical protein CATC2_07750 n=2 Tax=... 94 2e-18 UniRef50_A4W7R9 Putative inner membrane protein n=1 Tax=Enteroba... 93 7e-18 UniRef50_B5XTC2 Putative uncharacterized protein n=5 Tax=Klebsie... 90 4e-17 UniRef50_C9XZ73 Putative uncharacterized protein n=2 Tax=Cronoba... 89 8e-17 UniRef50_A8AFU0 Putative uncharacterized protein n=2 Tax=Citroba... 89 8e-17 UniRef50_A4WED3 Putative uncharacterized protein n=1 Tax=Enterob... 85 2e-15 UniRef50_UPI0001C342D9 hypothetical protein CATC2_07960 n=1 Tax=... 84 3e-15 UniRef50_A7MR68 Putative uncharacterized protein n=2 Tax=Cronoba... 83 6e-15 UniRef50_UPI00019F10BE putative transcriptional regulator protei... 83 7e-15 UniRef50_A7MEB9 Putative uncharacterized protein n=2 Tax=Cronoba... 79 9e-14 UniRef50_B5XXF5 Putative uncharacterized protein n=3 Tax=Enterob... 76 6e-13 UniRef50_A8AFU1 Putative uncharacterized protein n=2 Tax=Citroba... 76 7e-13 UniRef50_A4WAX1 Putative uncharacterized protein n=1 Tax=Enterob... 71 2e-11 UniRef50_B5XXF4 Cyclic nucleotide-binding domain protein n=4 Tax... 70 5e-11 UniRef50_UPI00019F1389 hypothetical protein CATC2_03035 n=1 Tax=... 68 2e-10 UniRef50_A8AIP5 Putative uncharacterized protein n=3 Tax=Enterob... 67 3e-10 UniRef50_UPI00019F1602 hypothetical protein CATC2_05660 n=1 Tax=... 66 6e-10 UniRef50_UPI00019F17B7 hypothetical protein CATC2_24059 n=1 Tax=... 65 1e-09 UniRef50_A4WAX2 Putative uncharacterized protein n=1 Tax=Enterob... 61 3e-08 UniRef50_C1MAT1 Predicted protein n=2 Tax=Citrobacter RepID=C1MA... 56 6e-07 UniRef50_UPI0001C33F28 CRP/FNR family transcriptional regulator ... 55 1e-06 UniRef50_C4X4Z2 Putative uncharacterized protein n=4 Tax=Klebsie... 51 3e-05 UniRef50_C4XB37 Putative uncharacterized protein n=2 Tax=Klebsie... 50 5e-05 >UniRef50_P0AAP6 Uncharacterized protein yaiV n=77 Tax=Enterobacteriaceae RepID=YAIV_ECO57 Length = 207 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV Sbjct: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 Query: 61 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA Sbjct: 61 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV Sbjct: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 Query: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 LAALRKGGYIEMNKGKLVAINRLPSEY Sbjct: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 >UniRef50_UPI00017F30F5 putative DNA-binding transcriptional regulator n=2 Tax=Enterobacteriaceae RepID=UPI00017F30F5 Length = 209 Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 104/207 (50%), Positives = 151/207 (72%), Gaps = 6/207 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNED---TFVILEGVISL-RREENV 60 KPL E +L CL GT F+ N+ Q + ++ NN+D TFVI G++++ R+ + + Sbjct: 5 AKPLSELSRLITCLEVAGTLFK--NDPQQLITTGNNNDDEPSTFVIQSGLVAVHRKSDEL 62 Query: 61 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 L+GI +AP+I GL+ + + + Y L+++ C+G++LPA + LI+Q LW+DAF WL+ Sbjct: 63 LVGIARAPFIYGLSAWINDSYLEYSLMAQTPCSGFYLPASRACQLIQQQHLWQDAFCWLS 122 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 W N IL RD QL+G+NSY QIRA L++M +W++ LRS+IGVMN+I + TRISRSVVAEV Sbjct: 123 WINHILGKRDTQLVGNNSYSQIRAMLINMAEWDDTLRSKIGVMNHIQRSTRISRSVVAEV 182 Query: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 LAALR+G YI M++GKLV+INRLP++Y Sbjct: 183 LAALRQGNYINMSRGKLVSINRLPTDY 209 >UniRef50_C9XX32 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX32_CROTZ Length = 208 Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 129/208 (62%), Gaps = 1/208 (0%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN- 59 ML +VKPL L + L GT F+ + ++ F ++ + + EG +++ RE+N Sbjct: 1 MLDLVKPLHHLDALQRHLGPAGTPFDIDAHCELSFINEQGEQQCWFFKEGSLNVWREQNH 60 Query: 60 VLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 + + + +P + +D ++ + Y L++E C G+ +P ++ I +IE QLW+ +W Sbjct: 61 IHVDLMTSPLYLSFSDAVIPEPLRYTLVTETPCRGFRMPVRRAIDIIEHRQLWKAFCHWQ 120 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 W R E RD Q IG +Y QIRATLL+M W+ E+R+++GV+++I T ISRSV+AE Sbjct: 121 TWLMRWFEWRDAQFIGATTYSQIRATLLTMAGWSPEVRAQVGVIHHIQNHTHISRSVIAE 180 Query: 180 VLAALRKGGYIEMNKGKLVAINRLPSEY 207 VLA LRKG YIEM KGKLVA+N+LP Y Sbjct: 181 VLAELRKGKYIEMQKGKLVAVNKLPLNY 208 >UniRef50_B5BLI5 Putative uncharacterized protein n=34 Tax=Salmonella enterica RepID=B5BLI5_SALPK Length = 234 Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 113/210 (53%), Gaps = 9/210 (4%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILE-GVISLRREENVL-I 62 KP L L +G F + F N+E V+LE G++S R++N L I Sbjct: 27 AKPHAAIDALFSALLPFGQPFTLGIGDE--FYLQANDEHYIVLLESGIVSFCRDDNRLHI 84 Query: 63 GITQAPYIMGLADGLMKN-DIPYK----LISEGNCTGYHLPAKQTITLIEQNQLWRDAFY 117 + AP ++G+ D ++P + L++E CTG + I + ++ LW D Sbjct: 85 SSSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCTGRFVRLPDFIKIADECDLWHDVAR 144 Query: 118 WLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVV 177 LA++ ++ RD +L+G NSY ++RA L+ + + + R I V+N+I +RT ISRS Sbjct: 145 CLAYRLMVMSARDRELVGVNSYLKVRALLIEIWAYPQAYRENIIVLNFIQRRTGISRSRT 204 Query: 178 AEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 ++L+ L+KGGYI ++ G+L A+ +LP Y Sbjct: 205 MKILSELKKGGYIHIDNGRLTALGKLPVAY 234 >UniRef50_B5BAM2 Putative transcriptional regulator protein n=33 Tax=Salmonella enterica RepID=B5BAM2_SALPK Length = 223 Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 6/174 (3%) Query: 40 NNEDTFVILEGVISL-RREENVLIGITQAPYIMGLADGL-----MKNDIPYKLISEGNCT 93 N +I +G I + RR +++++G +P I+GL D ++ + I+E C Sbjct: 50 NRSHILLITKGAIKVCRRIDSIVMGCGVSPMILGLVDAYADLYQLEENSDVFFIAETTCE 109 Query: 94 GYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWN 153 Y +P K + + ++ LWRD L ++ + RD LIG ++Y QI+A LL + + Sbjct: 110 YYPVPVKDFVEIADEKHLWRDISNILMYRIAFMTNRDRNLIGQDAYSQIKALLLELWSYP 169 Query: 154 EELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 E R I N+I QRT +SRS + +VL+ L+ G YI++ G+L+ + LP + Sbjct: 170 ESSRFEINAQNFIQQRTGLSRSRIMQVLSELKAGDYIKILHGRLLELRNLPVSF 223 >UniRef50_A8GI54 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Serratia proteamaculans 568 RepID=A8GI54_SERP5 Length = 226 Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 3/169 (1%) Query: 41 NEDTFVILEGVISLRRE-ENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPA 99 N F++L+G ++L R+ +++L+ AP+I+GLA+ L Y L E +C + + Sbjct: 59 NPQVFLLLQGAVNLHRQSDDLLMTTIYAPHIIGLAELLHPVGQTY-LHLEKDCEIHVVAG 117 Query: 100 KQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRS 158 + + ++Q+ LW D LA+Q LRD+ L+ +++Y+ IR LL +I+ E R Sbjct: 118 SKVLQKLDQHPMLWADVSRILAYQLHFASLRDLHLLNNHAYDAIRGKLLELINAPESTRL 177 Query: 159 RIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 + YI +RT ++RS + + L+ L+ GGYI M KG L + LP Y Sbjct: 178 DYSALRYIQERTTLARSTILKCLSDLKTGGYIAMEKGHLTQVFNLPQRY 226 >UniRef50_C1M4J5 CRP/FNR family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=C1M4J5_9ENTR Length = 209 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 4/205 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVIS-LRREENVLIG 63 V+P Q +L + L + + +++++ N ++ L+G +S LR + +LI Sbjct: 7 VRPEQSIQRLMQALEPIAEKMKVVPRRRIMWKYK-NKPQLYLFLQGELSILRSSDGLLIV 65 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 P++ G+A+ +++ + L +E T + A + L Q LW DA L++ Sbjct: 66 TVYEPHLFGIAE-MIQPVHGHLLRAEAESTLLRVDADKARELFHQQGLWEDAAAVLSYHT 124 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 L RD ++ +Y IR L MI EE R R+ +++YI RT +SRS V V++A Sbjct: 125 GYLFYRDDLVVQQRTYSVIRNHLEEMILLPEETRKRVSILDYIQDRTHLSRSSVLNVVSA 184 Query: 184 LRKGGYIEMNKGK-LVAINRLPSEY 207 L+KGGYI+ +G L +IN+LP + Sbjct: 185 LKKGGYIDFERGGYLTSINKLPERF 209 >UniRef50_UPI00019F1C16 hypothetical protein CATC2_07750 n=2 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1C16 Length = 228 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL-IG 63 KPL + L G FE N ++ F + ++EG S+ + + L IG Sbjct: 20 TKPLTSIKNVYSKLEAIGKPFELNTGMRLYFRDENQLSYIIFLVEGCFSVYHQSSELNIG 79 Query: 64 ITQAPYIM---GLADGLMKNDIPYK--LISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 I +P I+ G+ + + P + +++E +C G+ +P + I + LW D Sbjct: 80 IGFSPTILNLVGIYNQYHEGQKPPRHFMVAETHCKGFKVPLETFIEQCNTHYLWPDISQI 139 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 L + ++ + + QL+ ++Y +R+ LL + + E++R+ + + I +RT +SRS V Sbjct: 140 LVQRLMVMSMIEEQLVCSDAYSAVRSILLEIWLYPEDIRNNFNITSVIQRRTNLSRSRVM 199 Query: 179 EVLAALRKGGYIEMNKGKLVAINRLPSEY 207 ++L+AL++GGYI++ GKL+ +N LP + Sbjct: 200 DILSALKQGGYIKIRTGKLIELNFLPKAF 228 >UniRef50_A4W7R9 Putative inner membrane protein n=1 Tax=Enterobacter sp. 638 RepID=A4W7R9_ENT38 Length = 202 Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 110/205 (53%), Gaps = 5/205 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIG 63 +KP K+ + +S TR E+++I + TF++ G +++ R +++L+ Sbjct: 1 MKPENHILKIIEAISD-PTRIRNGRERKIISVDNYEEAMTFILHSGTVAIHRSSDSLLLK 59 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ- 122 +AP I+G+ + L+ + + + + + L K I +IE+ LW++A Y+ + Sbjct: 60 FVEAPMIVGM-NILIDTNEGFYMQAHSDVEYEILSNKSVIDIIERENLWKEAAYFFMFGV 118 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 R+LE G +YE I+ L+S++ +ELR + +YI +T ISRS V ++L+ Sbjct: 119 QRLLEAHQTSA-GRTTYELIKQNLMSLMAEKDELRMMVNACDYIMDKTHISRSRVMKILS 177 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 L+ G YI + +G L+ IN+LP Y Sbjct: 178 DLKTGDYIVIERGVLIKINKLPETY 202 >UniRef50_B5XTC2 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=B5XTC2_KLEP3 Length = 248 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 8/177 (4%) Query: 39 VNNEDTFVILE-GVISL-RREENVLIGITQAPYIMGLADGL-MKNDIPYK----LISEGN 91 + E ++LE G+ SL E N++I +P ++GL DG + N IP K L +E + Sbjct: 72 IQAESGLILLEEGIASLCHAENNMVISTIFSPSLLGLIDGYGVFNGIPEKHHCSLFAETD 131 Query: 92 CTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMID 151 G+ + + + ++ LW++ + LA + +L +R +++G +SY +R L + D Sbjct: 132 LRGHWIAHQAAVEILNAQNLWQEMAHVLAQRLMVLSMRSQEMMGVDSYLMVRTLLTELAD 191 Query: 152 WNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAI-NRLPSEY 207 + E R +I V+++I +RT +SRS + +L+ LRKG YI +++G L I + LP+ + Sbjct: 192 YPEAYRRQINVLSFIQRRTNLSRSRIMSILSELRKGDYITIHRGVLRTIAHPLPAHF 248 >UniRef50_C9XZ73 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XZ73_CROTZ Length = 203 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 10/202 (4%) Query: 6 KPLQEFGKLDKCLSRYG--TRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLI 62 KPL E ++ + YG +R E N + + + +I G SL R+ + +L+ Sbjct: 6 KPLAEIYRIADIFNSYGNWSRAEKNT------LIPLRDGEICIIRGGQFSLMRQSDRLLL 59 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 + AP ++GLA L K+ KL ++ C +P + IE+N +W Sbjct: 60 EKSSAPSVLGLARNLGKSQFA-KLQADSECHYQLIPFDYFMQEIEKNHCQLHLLILSSWI 118 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 IL R+ +IG NS+ I+A + + +E +R+RI V +YI ++T +SRS+V + L+ Sbjct: 119 INILCYREEIMIGRNSFSMIKANIDCLAAMDEFMRNRINVADYIVKKTNLSRSMVMKTLS 178 Query: 183 ALRKGGYIEMNKGKLVAINRLP 204 LR IE++KGKLVA++ LP Sbjct: 179 QLRSAKNIEISKGKLVAVHHLP 200 >UniRef50_A8AFU0 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8AFU0_CITK8 Length = 210 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 19/190 (10%) Query: 22 GTRFEF--NNEKQVIFSSDVNNEDTFVILEGVISLRREEN-VLIGITQAPYIMGLADGLM 78 G+RF F E Q +F GV+S+ EN +L+GI AP +G L Sbjct: 36 GSRFVFVQGGEHQCLF-----------FRTGVVSIENIENSLLLGIASAPVSLGFTSAL- 83 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHN 137 + + + + E C +P + IE+ LW A + + N++ +++ Sbjct: 84 SDKLLIRALEE--CEAATIPLDDVMETIERKHLWEIMAKHMIIVTNKLF-IQNEMATAPT 140 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 +Y+ + L ++ E +RS++ YI +RTR+SRS V ++L+AL+KGGYIE+ +GKL Sbjct: 141 AYDLLCYQLQALSQEPESIRSQMAAYQYILERTRLSRSSVMKMLSALKKGGYIELEQGKL 200 Query: 198 VAINRLPSEY 207 +AIN LPS + Sbjct: 201 IAINHLPSRF 210 >UniRef50_A4WED3 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WED3_ENT38 Length = 202 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 113/206 (54%), Gaps = 7/206 (3%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIG 63 +KP + KL +S R + + E+Q+I + F++ +G ++ R +++L+ Sbjct: 1 MKPAEHITKLIASVSD-CARIQNSRERQIISLQQYTDPMCFILHKGTAAVYRGYDHLLLS 59 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHL-PAKQTITLIEQNQLWRD-AFYWLAW 121 +AP+IMGL L KN Y + Y + P + I++ LW A+Y++ Sbjct: 60 HIKAPHIMGLNLLLEKNSELY--FQARSSIAYEIVPRSRFEQNIKEQHLWEPLAYYFMFS 117 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVL 181 R L+ + G ++Y+ +R L+++++ +EELR +YI ++T +SRS + ++L Sbjct: 118 SKRFLQNNFIS-SGVSTYDLVRNNLIALMNEDEELRLATNTCDYIQEKTLLSRSGIMKML 176 Query: 182 AALRKGGYIEMNKGKLVAINRLPSEY 207 + L+ G +IE+++G L+ IN LP++Y Sbjct: 177 SDLKHGSHIELHRGVLITINNLPAKY 202 >UniRef50_UPI0001C342D9 hypothetical protein CATC2_07960 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C342D9 Length = 212 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 92/164 (56%), Gaps = 2/164 (1%) Query: 45 FVILEGVISLRREENVLIGIT-QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTI 103 +++L+G +S R++N + +T AP + GL +N Y G +P ++ I Sbjct: 50 YLLLKGYVSYHRDKNDIAVLTASAPTLFGLNYIASENITTYIKTLPPAIIGV-MPLEKAI 108 Query: 104 TLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVM 163 +IE++ LW+ + + L + + Q+ SYE I+ LL ++ NE R I + Sbjct: 109 EIIEEHHLWKAVAQHMMVLSNKLYIINEQMSAPTSYELIKFLLLQLMSENESYRKSITAV 168 Query: 164 NYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 NYI +T++SRS + +L L+ GGYIE+++G L+ +N+LP+++ Sbjct: 169 NYILGKTQLSRSGIMRILTNLKAGGYIEIHRGCLIRLNKLPAKF 212 >UniRef50_A7MR68 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MR68_ENTS8 Length = 219 Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 6/169 (3%) Query: 42 EDTFVILEGVISLRREENVLIGI-TQAPYIMGLADGLMKNDIPYKLI--SEGNCTGYHLP 98 + VI +G +S+ R + L+ I + P ++G+ N + +E C +P Sbjct: 54 DHIIVIEQGALSMHRMMDGLMMIESTRPQLLGIT---YNNQFSHHFTIKAESVCEARLVP 110 Query: 99 AKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRS 158 +IE QLWR+ ++W +L + +G SY IR L+ + NE+ R Sbjct: 111 RSDFEAIIETRQLWRELLLVVSWYYDVLYWKSYHYLGRQSYTLIRNCLIELAAKNEQERE 170 Query: 159 RIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 I ++I +T +S+S + +V + LRKG YI++++G+L +IN+LP Y Sbjct: 171 EINACDFIRGKTNLSQSYILKVFSDLRKGDYIDISRGRLKSINKLPDRY 219 >UniRef50_UPI00019F10BE putative transcriptional regulator protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F10BE Length = 217 Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 5/205 (2%) Query: 6 KPLQEFGKLDKCLS--RYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIG 63 KP+Q L LS R T F+ +K S+ + V+LEG +RR + +++ Sbjct: 15 KPVQHINALIGPLSCDRRVTVFDAGTQKPFPHISE-HVGPIIVVLEGGFEIRRTDGLVLV 73 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 PY++GL + L + + L ++ ++++ LW LAWQ Sbjct: 74 RGGGPYVLGLGEALYGRG-RHTIYCTTALNIVSLSKEEAFEIVDKESLWSHVANLLAWQL 132 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 +++ RD +L ++Y IRA L + + ++++I QRT +SRS++ +V++ Sbjct: 133 QLMVARDEELTSVDAYTMIRAKLSELYMLKTQFGLSFNIVDFIQQRTNLSRSIIHQVISE 192 Query: 184 LRKGGYIEMNKGKLVAI-NRLPSEY 207 L++G YI + +G+LV + + LP +Y Sbjct: 193 LKRGEYITIVRGRLVDMKSSLPQKY 217 >UniRef50_A7MEB9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MEB9_ENTS8 Length = 208 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 94/172 (54%), Gaps = 6/172 (3%) Query: 40 NNEDTFVILEGVISLRRE-ENVLIGITQAPYIMGLADGLMKNDI---PYKLISEGNCTGY 95 N E ++L G ++L R+ +N++ T P I G++ L N+ ++LI + + Sbjct: 39 NEESVNILLSGSLALTRDWDNLIFFETNRPNIFGIS--LQSNNARFEHFRLIIKEDSLVK 96 Query: 96 HLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEE 155 + + +IE+ +LW++ + +++ +L ++ +SY +R +L+++ + E Sbjct: 97 RISRADFLAVIEEQKLWKELSHVISFYYHVLLWKNYHFYAADSYMLVRKSLITLGEMPLE 156 Query: 156 LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 R I YI T +S+S V +V+ LRKGGYIE+ +G+L+ I +LP +Y Sbjct: 157 SRININASQYITSTTNLSKSYVMKVIQELRKGGYIEIQRGRLITIGKLPQKY 208 >UniRef50_B5XXF5 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B5XXF5_KLEP3 Length = 209 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 16/171 (9%) Query: 45 FVILEGVISL-RREENVLIGITQAPYIMGLADGLMKNDIPYK--LISEGNCTGYHLPAKQ 101 ++ILEG +++ RR +N+++ ++P + GLA+ DI + + + C + + Sbjct: 47 YLILEGTVAVYRRNDNMMLSTARSPAVFGLAN---LTDIYFDDYIKTINPCLIGEISTAR 103 Query: 102 TITLIEQNQLW-----RDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEEL 156 +I++ LW + F + N ++ +YE IR LL++I+ +E Sbjct: 104 VNDIIKEKSLWGLLSKQLMFVYGRLYNNVMPQG-----APTAYEMIRQQLLNLIEEDESY 158 Query: 157 RSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 R+ + YI ++T +SRS V +LA L+ GG+IEM +G+L+ I++LP+ Y Sbjct: 159 RAAVTAELYIREKTHLSRSGVMRILADLKTGGFIEMEEGRLIKIHKLPARY 209 >UniRef50_A8AFU1 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8AFU1_CITK8 Length = 225 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 6/206 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 +KP++ KL L + E +Q+I + + +++L+G I + R + ++ Sbjct: 23 LKPIEHVEKLIAHLKPHANTRE-TKCRQIINNENNRPHQCYLLLKGTIGVFRARDGFMLN 81 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGY-HLPAKQTITLIEQNQLWRDAFYWLAWQ 122 AP+I GL++ L+ D Y L+ C+ +P ++ +I LW L + Sbjct: 82 SEVAPFIFGLSNQLV--DAEYLLMRSEECSEIAFIPLEKVNDVIANENLWESLAKVLIYT 139 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 + ++ SY+ IRA L ++ + E R I NYI RT +SRS V ++LA Sbjct: 140 AGRVYDHCTRISAPTSYDIIRAQLYELMRESNEFRQNITAANYIQSRTFLSRSSVMKILA 199 Query: 183 ALRKGGYIEMNKGKLVAINR-LPSEY 207 L+KGGYI ++G L I + +P +Y Sbjct: 200 DLKKGGYIVTDRGVLKQIQQNIPLKY 225 >UniRef50_A4WAX1 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAX1_ENT38 Length = 221 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 4/170 (2%) Query: 39 VNNEDTFVILEG-VISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLI-SEGNCTGYH 96 N + +++ EG VI RR++ + + AP++ G L N P I + Sbjct: 53 TNTKLCYLLEEGHVIINRRDDGMTLNTESAPFVFGFT--LNSNLHPRLCIRPSPDAVLRR 110 Query: 97 LPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEEL 156 L + I +IEQ LW L + + L +L YE +R+ L+ +I+ + ++ Sbjct: 111 LSLENAIQIIEQESLWEPLAQLLIFISARLFRHCTRLSQSGMYETVRSLLIELINESPKI 170 Query: 157 RSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSE 206 R NYI R +SRS + +LA LR G+IE+ G+LV IN LP + Sbjct: 171 RQAESTYNYIQNRCLLSRSGIMSILATLRAHGHIELENGRLVKINNLPQK 220 >UniRef50_B5XXF4 Cyclic nucleotide-binding domain protein n=4 Tax=Enterobacteriaceae RepID=B5XXF4_KLEP3 Length = 223 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 4/204 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 +KP + L K + R V + D + F++L+G ++L RR + +++ Sbjct: 23 LKPFRHIEALIKHVLPAAERVVIGRGDVVHYYKD-DIRQCFLLLQGSVALHRRGDGIVLN 81 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 AP+I+G++ + + + +P ++ Q LW L + Sbjct: 82 SESAPFILGVSSQFSSEHLYVRALETSEIA--RVPLDCFNHIVAQLDLWEHFSKLLIYTA 139 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 + Q+ ++Y+ IR L+ ++ + +R +I YI RT +SRS + +LA Sbjct: 140 SRVYEHCAQISQMSAYDIIRFQLVELMQEPDAIRQKITAAAYIKSRTYLSRSGIMRILAE 199 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 LR G YI M +G L+ IN LP +Y Sbjct: 200 LRTGKYITMERGILLDINHLPRKY 223 >UniRef50_UPI00019F1389 hypothetical protein CATC2_03035 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1389 Length = 231 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 104/210 (49%), Gaps = 10/210 (4%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVIS-LRREENVLIGI 64 KP++ L L YG + K + + + +I +G++S + + + Sbjct: 24 KPMKAIEALFLHLLPYGRKILLKKNKCYRLNEEQDGIGLVLITDGLVSAINSDTGHFVST 83 Query: 65 TQAPYIMGLADGL-----MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 P ++GL G + I L +E + + + +P ++ + + ++ +LW L Sbjct: 84 LYPPSLLGLCHGYSAFYNVPGRIRSTLHAETDVSLFFIPLQRFVDVADKEELWHHVARIL 143 Query: 120 AWQNRILEL--RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVV 177 A +RI+ + ++ IG +SY I++ + + + E R+ I + ++I +++ +SRS + Sbjct: 144 A--HRIITMVNKEKTYIGMDSYTIIKSIIEEVWLYPENYRTHISLPHFIQKKSGLSRSRI 201 Query: 178 AEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 ++L L+ GGYI + KG+L ++ +LP Y Sbjct: 202 MKILLDLKIGGYINIVKGRLTSVTKLPLSY 231 >UniRef50_A8AIP5 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AIP5_CITK8 Length = 207 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 4/177 (2%) Query: 32 QVIFSSDVNNEDTFVILEGVISLRREENVLIGIT-QAPYIMGLADGLMKNDIPYKLISEG 90 Q I +SD +E +I+ G + RR + L T Q I GL+ + + ++ Sbjct: 34 QKITTSD--SEYIHIIVSGDVEFRRTSDELCMFTLQGQCIFGLS-AIFYGSLHMYGLART 90 Query: 91 NCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMI 150 N + + + L+ ++ LW D L+W +L RD L+ ++Y IR L+ + Sbjct: 91 NTVVRSIKKDEFMRLLTEHSLWPDLTRVLSWYICLLSKRDDVLVARSAYSVIREFLIEIN 150 Query: 151 DWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 + I V +YI + T +RS + ++L+ L+KG YI + K +L+++ LP +Y Sbjct: 151 ELIIHHNRDINVYDYIQEYTNFARSTIIKILSDLKKGNYIVIEKSRLMSMTTLPEKY 207 >UniRef50_UPI00019F1602 hypothetical protein CATC2_05660 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1602 Length = 212 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 88/160 (55%), Gaps = 4/160 (2%) Query: 45 FVILEGVISLRRE-ENVLIGITQAPYIMGLADGLMK--NDIPYKLISEGNCTGYHLPAKQ 101 +++ EG I +RR + +++ QAP ++G+A+ + N+ Y + + CT + + Sbjct: 52 WLLTEGRIVIRRRIDGLILASQQAPMMLGMAEFFLPTGNNF-YDIEAVSPCTTHVVKKTD 110 Query: 102 TITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG 161 +T++ +++LW A+ +++ RD + + + + L + +++R RI Sbjct: 111 FMTIVNRDRLWESVAIVEAYIIQVMSQRDRLITSRTATDMVWGHLELLQQEPDDIRKRIP 170 Query: 162 VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 + YI +RT +SRS + + LA L++ G I++++G L+ I+ Sbjct: 171 AVQYIRERTGLSRSTIMDTLARLKRQGAIQLHRGHLICIS 210 >UniRef50_UPI00019F17B7 hypothetical protein CATC2_24059 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17B7 Length = 214 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 5/149 (3%) Query: 62 IGITQAPYIMGLAD-GLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 +GI +P I+GL G I ++ IS C + +I+ N LW D + Sbjct: 68 LGIATSPAIIGLGQLGGTNAFIEFESISP--CLIDTINLDDFCNIIDNNNLWLDICKIMI 125 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNE-ELRSRIGVMNYIHQRTRISRSVVAE 179 L +R ++YE IR+ L+ M + ++ R V+ Y+ +R+SRS++ + Sbjct: 126 PALGTLSIRASTSGLQSAYEIIRSYLIYMDNEKSFSIKERYTVVKYMQTFSRLSRSMILK 185 Query: 180 VLAALRKGGYIEMNKGKLVAINR-LPSEY 207 +LA L+ GG+IEM GKL+ INR LP ++ Sbjct: 186 ILAELKVGGFIEMENGKLIRINRNLPEKF 214 >UniRef50_A4WAX2 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAX2_ENT38 Length = 208 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 11/165 (6%) Query: 46 VILEGVISLRREENVLIGIT-QAPYIMGLA--DGLMKNDIPYKLISEGNCTGYHLPAKQT 102 +I G I + R + L+ +T AP I+GL D + K+ + L ++ Sbjct: 52 IIHSGTIEVHRSSDGLLIVTLPAPGILGLGVHDAFIVTAETSKVST--------LTVEEL 103 Query: 103 ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGV 162 I +N LW A + L QL +YE IR L + R + + Sbjct: 104 QRHISENGLWEVAAQHMMVVTNKLYSYSKQLSAPTAYEVIRNQLRELSHEPAHFREHVTI 163 Query: 163 MNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 YI +T +SRS + ++LA L+ GGYI + G+L I LP++Y Sbjct: 164 ERYIRDKTHLSRSSIMKILAELKTGGYIVIKDGRLCEIKHLPAKY 208 >UniRef50_C1MAT1 Predicted protein n=2 Tax=Citrobacter RepID=C1MAT1_9ENTR Length = 201 Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 13/167 (7%) Query: 38 DVNNEDTFVILE-GVISLRREENVLIGIT-QAPYIMGLADGLMKNDIP-YKLISEGNCTG 94 D+ + + LE G +S+ R EN L+ ++ AP I+GL M+ ++ + L + +C Sbjct: 35 DLKTDGQILFLEKGTVSVYRVENDLVTVSISAPAILGLPQ--MRTEVAGHYLRCDTDCEM 92 Query: 95 YHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDW-- 152 + + + L LW+ AF L + R Q S+ IR ++ + + Sbjct: 93 WAMSVQNADHLFTTKNLWKQAFDILTHHLQ----RYFQREALQSHRTIREQIIEHVKYIW 148 Query: 153 --NEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 E+R + V +I R ISRS + +VL L G I +N+GKL Sbjct: 149 SMEPEVREKTSVYTFILTRNHISRSAIHKVLQELVNDGKITLNRGKL 195 >UniRef50_UPI0001C33F28 CRP/FNR family transcriptional regulator n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33F28 Length = 206 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 6/162 (3%) Query: 40 NNEDTFVILEGVISLRREENVLIGITQ-APYIMGLADGLMKNDIPYKLISEGNCTGYHLP 98 NN D + EG + +RR + L+ T APYIM D Y I + Y + Sbjct: 40 NNTDFVFLTEGAMDIRRTMDDLVFCTALAPYIMSGTDHPESEAYFYGEI-RAHSVAYRIK 98 Query: 99 AKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRA--TLLSMIDWNEEL 156 + + L+E+ L+++ + ++++ + RD L G + I T+LSM+ E Sbjct: 99 KETALNLVEKFNLFKELWIVEKYKSQAIWRRDANLNGASVKVAIGELITVLSMLP--PEF 156 Query: 157 RSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLV 198 R I V ++ +RT+ S+S + V+ R G +++ G L+ Sbjct: 157 RKSISVYKFLQERTKYSKSTIMRVVNHYRDNGQLDIKNGILI 198 >UniRef50_C4X4Z2 Putative uncharacterized protein n=4 Tax=Klebsiella RepID=C4X4Z2_KLEPN Length = 255 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/44 (54%), Positives = 36/44 (81%), Gaps = 1/44 (2%) Query: 165 YIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR-LPSEY 207 +I +RT +SRS V +VLAALR+GGYI + KGKL++I+R +P ++ Sbjct: 212 FIIKRTNLSRSYVYQVLAALREGGYITVKKGKLISIDRHIPEKF 255 >UniRef50_C4XB37 Putative uncharacterized protein n=2 Tax=Klebsiella RepID=C4XB37_KLEPN Length = 211 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/48 (52%), Positives = 36/48 (75%), Gaps = 1/48 (2%) Query: 161 GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR-LPSEY 207 G+ +I +RT +SR+ V VLA L+ GGYI M +GKL++I+R LP+EY Sbjct: 164 GLALFIIRRTNLSRTHVFRVLADLKAGGYITMKRGKLISIDRPLPAEY 211 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAP6 Uncharacterized protein yaiV n=77 Tax=Enterobact... 251 9e-66 UniRef50_C9XX32 Putative uncharacterized protein n=2 Tax=Cronoba... 234 1e-60 UniRef50_UPI00017F30F5 putative DNA-binding transcriptional regu... 219 7e-56 UniRef50_B5BLI5 Putative uncharacterized protein n=34 Tax=Salmon... 214 2e-54 UniRef50_B5XXF4 Cyclic nucleotide-binding domain protein n=4 Tax... 201 1e-50 UniRef50_UPI00019F1C16 hypothetical protein CATC2_07750 n=2 Tax=... 199 5e-50 UniRef50_A8AFU1 Putative uncharacterized protein n=2 Tax=Citroba... 199 7e-50 UniRef50_A4WED3 Putative uncharacterized protein n=1 Tax=Enterob... 194 2e-48 UniRef50_UPI00019F10BE putative transcriptional regulator protei... 191 1e-47 UniRef50_UPI00019F1389 hypothetical protein CATC2_03035 n=1 Tax=... 190 2e-47 UniRef50_C1M4J5 CRP/FNR family transcriptional regulator n=6 Tax... 190 2e-47 UniRef50_A4W7R9 Putative inner membrane protein n=1 Tax=Enteroba... 189 4e-47 UniRef50_B5BAM2 Putative transcriptional regulator protein n=33 ... 187 1e-46 UniRef50_A8GI54 Putative transcriptional regulator, Crp/Fnr fami... 185 8e-46 UniRef50_B5XTC2 Putative uncharacterized protein n=5 Tax=Klebsie... 182 7e-45 UniRef50_UPI0001C342D9 hypothetical protein CATC2_07960 n=1 Tax=... 182 9e-45 UniRef50_B5XXF5 Putative uncharacterized protein n=3 Tax=Enterob... 180 3e-44 UniRef50_A7MR68 Putative uncharacterized protein n=2 Tax=Cronoba... 179 4e-44 UniRef50_A7MEB9 Putative uncharacterized protein n=2 Tax=Cronoba... 174 2e-42 UniRef50_A4WAX1 Putative uncharacterized protein n=1 Tax=Enterob... 172 8e-42 UniRef50_C9XZ73 Putative uncharacterized protein n=2 Tax=Cronoba... 168 1e-40 UniRef50_A8AIP5 Putative uncharacterized protein n=3 Tax=Enterob... 168 1e-40 UniRef50_A8AFU0 Putative uncharacterized protein n=2 Tax=Citroba... 166 4e-40 UniRef50_A4WAX2 Putative uncharacterized protein n=1 Tax=Enterob... 164 2e-39 UniRef50_UPI00019F1602 hypothetical protein CATC2_05660 n=1 Tax=... 160 2e-38 UniRef50_UPI00019F17B7 hypothetical protein CATC2_24059 n=1 Tax=... 157 2e-37 UniRef50_UPI0001C33F28 CRP/FNR family transcriptional regulator ... 154 3e-36 UniRef50_C1MAT1 Predicted protein n=2 Tax=Citrobacter RepID=C1MA... 136 4e-31 UniRef50_C4X4Z2 Putative uncharacterized protein n=4 Tax=Klebsie... 93 7e-18 UniRef50_C4XB37 Putative uncharacterized protein n=2 Tax=Klebsie... 86 6e-16 Sequences not found previously or not previously below threshold: UniRef50_C6DJ46 Putative uncharacterized protein n=1 Tax=Pectoba... 79 1e-13 UniRef50_D2TRD7 Putative uncharacterized protein n=1 Tax=Citroba... 72 1e-11 UniRef50_C1DB51 cAMP-binding protein-catabolite gene activator a... 62 9e-09 UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator a... 58 3e-07 UniRef50_B1G1H4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 55 1e-06 UniRef50_C6L0Y1 Crp/Fnr family transcriptional regulator n=1 Tax... 50 3e-05 UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicob... 50 4e-05 UniRef50_B9Z4U0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 50 4e-05 UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protei... 50 5e-05 UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter fo... 50 6e-05 UniRef50_B5JTW7 Cyclic nucleotide binding protein n=1 Tax=gamma ... 49 8e-05 UniRef50_A2RDI8 Crp family regulatory protein n=26 Tax=Streptoco... 49 8e-05 UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n... 49 1e-04 UniRef50_C4KZ85 Transcriptional regulator, Crp/Fnr family n=1 Ta... 48 1e-04 UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr fami... 48 2e-04 UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 48 2e-04 UniRef50_Q4Q279 Putative uncharacterized protein n=3 Tax=Leishma... 47 4e-04 UniRef50_Q124D1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 47 4e-04 UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putat... 47 4e-04 UniRef50_A9BSL8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 47 4e-04 UniRef50_A1WYA2 Cyclic nucleotide-binding protein n=2 Tax=Ectoth... 47 6e-04 UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Ther... 47 6e-04 UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus R... 46 7e-04 UniRef50_Q9K5F3 Crp/Fnr family protein n=2 Tax=Bacillus lichenif... 46 8e-04 UniRef50_A4IT53 Putative uncharacterized protein n=1 Tax=Geobaci... 46 0.001 UniRef50_B1XXN2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 45 0.001 UniRef50_Q1ASB9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 45 0.001 UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curviba... 45 0.002 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 45 0.002 UniRef50_C0ZDT8 Transcriptional regulator n=1 Tax=Brevibacillus ... 45 0.002 UniRef50_Q1IRK0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 45 0.002 UniRef50_C2KXC0 Possible cNMP-binding regulatory protein n=1 Tax... 45 0.002 UniRef50_C9PYN1 CRP family transcription regulator n=1 Tax=Prevo... 44 0.002 UniRef50_C3XI85 Putative uncharacterized protein n=2 Tax=Helicob... 44 0.003 UniRef50_D0DBE2 Putative transcriptional regulator Crp/Fnr famil... 44 0.003 UniRef50_A5FCJ9 Putative transcriptional regulator, Crp/Fnr fami... 44 0.003 UniRef50_C3RK73 CRP/FNR family transcriptional regulator n=3 Tax... 43 0.005 UniRef50_Q6MK23 Transcription regulator containing cAMP-binding ... 43 0.005 UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Ta... 43 0.006 UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 43 0.007 UniRef50_A5VDU1 Putative transcriptional regulator, Crp/Fnr fami... 43 0.008 UniRef50_A4V7K8 Putative cyclic amp receptor-family protein n=1 ... 42 0.010 UniRef50_A4VU00 CAMP-binding protein-catabolite gene activator a... 42 0.010 UniRef50_B9K9E7 Transcriptional regulator, Crp/Fnr family n=7 Ta... 42 0.012 UniRef50_C6XJC0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 42 0.016 UniRef50_A6B7X3 Cyclic nucleotide binding protein/2 CBS domains ... 42 0.018 UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=L... 42 0.019 UniRef50_A3JBW7 Transcriptional Regulator, Crp/Fnr family protei... 42 0.020 UniRef50_A5VAR3 Putative transcriptional regulator, Crp/Fnr fami... 41 0.021 UniRef50_Q23JK5 Cation channel family protein n=1 Tax=Tetrahymen... 41 0.022 UniRef50_A7HRB7 Putative transcriptional regulator, Crp/Fnr fami... 41 0.023 UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidete... 41 0.023 UniRef50_UPI0001C42484 Crp/Fnr family transcriptional regulator ... 41 0.025 UniRef50_A1STJ2 Nucleotidyltransferase n=96 Tax=Proteobacteria R... 41 0.025 UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 41 0.027 UniRef50_A0E1L2 Chromosome undetermined scaffold_73, whole genom... 41 0.028 UniRef50_B0UG76 Putative transcriptional regulator, Crp/Fnr fami... 41 0.031 UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 T... 41 0.032 UniRef50_Q2BPU0 Transcriptional regulator, Crp-Fnr family protei... 41 0.033 UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 41 0.033 UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 40 0.036 UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 40 0.036 UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax... 40 0.039 UniRef50_A4ASV9 Cyclic nucleotide-binding domain (CNMP-BD) prote... 40 0.040 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 40 0.041 UniRef50_A8LSQ5 Transcriptional regulator n=19 Tax=Alphaproteoba... 40 0.044 UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdell... 40 0.045 UniRef50_UPI0001C360D6 transcriptional regulator, Crp/Fnr family... 40 0.048 UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes ... 40 0.050 UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 40 0.055 UniRef50_A6EU35 Transcriptional regulator, Crp/Fnr family protei... 40 0.069 UniRef50_UPI0001C368B1 CRP/FNR family transcriptional regulator ... 40 0.070 UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Ta... 40 0.071 UniRef50_P73234 Sll1924 protein n=1 Tax=Synechocystis sp. PCC 68... 39 0.079 UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Ta... 39 0.080 UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 39 0.082 UniRef50_A4B9Q8 CBS domain protein n=1 Tax=Reinekea blandensis M... 39 0.083 UniRef50_B7IVS0 Transcriptional regulator, Crp family n=49 Tax=B... 39 0.087 UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Ta... 39 0.098 UniRef50_C2HBY4 Crp family transcriptional regulator n=12 Tax=En... 39 0.098 UniRef50_C0ZKM2 Probable transcriptional regulator n=1 Tax=Brevi... 39 0.099 >UniRef50_P0AAP6 Uncharacterized protein yaiV n=77 Tax=Enterobacteriaceae RepID=YAIV_ECO57 Length = 207 Score = 251 bits (642), Expect = 9e-66, Method: Composition-based stats. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV Sbjct: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 Query: 61 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA Sbjct: 61 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV Sbjct: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 Query: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 LAALRKGGYIEMNKGKLVAINRLPSEY Sbjct: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 >UniRef50_C9XX32 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX32_CROTZ Length = 208 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 84/208 (40%), Positives = 129/208 (62%), Gaps = 1/208 (0%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 ML +VKPL L + L GT F+ + ++ F ++ + + EG +++ RE+N Sbjct: 1 MLDLVKPLHHLDALQRHLGPAGTPFDIDAHCELSFINEQGEQQCWFFKEGSLNVWREQNH 60 Query: 61 L-IGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 + + + +P + +D ++ + Y L++E C G+ +P ++ I +IE QLW+ +W Sbjct: 61 IHVDLMTSPLYLSFSDAVIPEPLRYTLVTETPCRGFRMPVRRAIDIIEHRQLWKAFCHWQ 120 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 W R E RD Q IG +Y QIRATLL+M W+ E+R+++GV+++I T ISRSV+AE Sbjct: 121 TWLMRWFEWRDAQFIGATTYSQIRATLLTMAGWSPEVRAQVGVIHHIQNHTHISRSVIAE 180 Query: 180 VLAALRKGGYIEMNKGKLVAINRLPSEY 207 VLA LRKG YIEM KGKLVA+N+LP Y Sbjct: 181 VLAELRKGKYIEMQKGKLVAVNKLPLNY 208 >UniRef50_UPI00017F30F5 putative DNA-binding transcriptional regulator n=2 Tax=Enterobacteriaceae RepID=UPI00017F30F5 Length = 209 Score = 219 bits (557), Expect = 7e-56, Method: Composition-based stats. Identities = 99/205 (48%), Positives = 148/205 (72%), Gaps = 2/205 (0%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIF-SSDVNNEDTFVILEGVISLRR-EENVLI 62 KPL E +L CL GT F+ + ++ + +++ + TFVI G++++ R + +L+ Sbjct: 5 AKPLSELSRLITCLEVAGTLFKNDPQQLITTGNNNDDEPSTFVIQSGLVAVHRKSDELLV 64 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 GI +AP+I GL+ + + + Y L+++ C+G++LPA + LI+Q LW+DAF WL+W Sbjct: 65 GIARAPFIYGLSAWINDSYLEYSLMAQTPCSGFYLPASRACQLIQQQHLWQDAFCWLSWI 124 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 N IL RD QL+G+NSY QIRA L++M +W++ LRS+IGVMN+I + TRISRSVVAEVLA Sbjct: 125 NHILGKRDTQLVGNNSYSQIRAMLINMAEWDDTLRSKIGVMNHIQRSTRISRSVVAEVLA 184 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 ALR+G YI M++GKLV+INRLP++Y Sbjct: 185 ALRQGNYINMSRGKLVSINRLPTDY 209 >UniRef50_B5BLI5 Putative uncharacterized protein n=34 Tax=Salmonella enterica RepID=B5BLI5_SALPK Length = 234 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 7/209 (3%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN-VLIG 63 KP L L +G F + + + ++ G++S R++N + I Sbjct: 27 AKPHAAIDALFSALLPFGQPFTLGIGDEF-YLQANDEHYIVLLESGIVSFCRDDNRLHIS 85 Query: 64 ITQAPYIMGLADGL-----MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 + AP ++G+ D + + L++E CTG + I + ++ LW D Sbjct: 86 SSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCTGRFVRLPDFIKIADECDLWHDVARC 145 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 LA++ ++ RD +L+G NSY ++RA L+ + + + R I V+N+I +RT ISRS Sbjct: 146 LAYRLMVMSARDRELVGVNSYLKVRALLIEIWAYPQAYRENIIVLNFIQRRTGISRSRTM 205 Query: 179 EVLAALRKGGYIEMNKGKLVAINRLPSEY 207 ++L+ L+KGGYI ++ G+L A+ +LP Y Sbjct: 206 KILSELKKGGYIHIDNGRLTALGKLPVAY 234 >UniRef50_B5XXF4 Cyclic nucleotide-binding domain protein n=4 Tax=Enterobacteriaceae RepID=B5XXF4_KLEP3 Length = 223 Score = 201 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 4/204 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIG 63 +KP + L K + R V + D + F++L+G ++L R + +++ Sbjct: 23 LKPFRHIEALIKHVLPAAERVVIGRGDVVHYYKD-DIRQCFLLLQGSVALHRRGDGIVLN 81 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 AP+I+G++ + + + +P ++ Q LW L + Sbjct: 82 SESAPFILGVSSQFSSEHLYVRALETS--EIARVPLDCFNHIVAQLDLWEHFSKLLIYTA 139 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 + Q+ ++Y+ IR L+ ++ + +R +I YI RT +SRS + +LA Sbjct: 140 SRVYEHCAQISQMSAYDIIRFQLVELMQEPDAIRQKITAAAYIKSRTYLSRSGIMRILAE 199 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 LR G YI M +G L+ IN LP +Y Sbjct: 200 LRTGKYITMERGILLDINHLPRKY 223 >UniRef50_UPI00019F1C16 hypothetical protein CATC2_07750 n=2 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1C16 Length = 228 Score = 199 bits (506), Expect = 5e-50, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 6/209 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL-IG 63 KPL + L G FE N ++ F + ++EG S+ + + L IG Sbjct: 20 TKPLTSIKNVYSKLEAIGKPFELNTGMRLYFRDENQLSYIIFLVEGCFSVYHQSSELNIG 79 Query: 64 ITQAPYIM---GLADGLMKNDIP--YKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 I +P I+ G+ + + P + +++E +C G+ +P + I + LW D Sbjct: 80 IGFSPTILNLVGIYNQYHEGQKPPRHFMVAETHCKGFKVPLETFIEQCNTHYLWPDISQI 139 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 L + ++ + + QL+ ++Y +R+ LL + + E++R+ + + I +RT +SRS V Sbjct: 140 LVQRLMVMSMIEEQLVCSDAYSAVRSILLEIWLYPEDIRNNFNITSVIQRRTNLSRSRVM 199 Query: 179 EVLAALRKGGYIEMNKGKLVAINRLPSEY 207 ++L+AL++GGYI++ GKL+ +N LP + Sbjct: 200 DILSALKQGGYIKIRTGKLIELNFLPKAF 228 >UniRef50_A8AFU1 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8AFU1_CITK8 Length = 225 Score = 199 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 6/206 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 +KP++ KL L + E +Q+I + + +++L+G I + R + ++ Sbjct: 23 LKPIEHVEKLIAHLKPHANTRE-TKCRQIINNENNRPHQCYLLLKGTIGVFRARDGFMLN 81 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNC-TGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 AP+I GL++ L+ D Y L+ C +P ++ +I LW L + Sbjct: 82 SEVAPFIFGLSNQLV--DAEYLLMRSEECSEIAFIPLEKVNDVIANENLWESLAKVLIYT 139 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 + ++ SY+ IRA L ++ + E R I NYI RT +SRS V ++LA Sbjct: 140 AGRVYDHCTRISAPTSYDIIRAQLYELMRESNEFRQNITAANYIQSRTFLSRSSVMKILA 199 Query: 183 ALRKGGYIEMNKGKLVAI-NRLPSEY 207 L+KGGYI ++G L I +P +Y Sbjct: 200 DLKKGGYIVTDRGVLKQIQQNIPLKY 225 >UniRef50_A4WED3 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WED3_ENT38 Length = 202 Score = 194 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIG 63 +KP + KL +S R + + E+Q+I + F++ +G ++ R +++L+ Sbjct: 1 MKPAEHITKLIASVSD-CARIQNSRERQIISLQQYTDPMCFILHKGTAAVYRGYDHLLLS 59 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 +AP+IMGL L KN Y + + +P + I++ LW Y+ + + Sbjct: 60 HIKAPHIMGLNLLLEKNSELY-FQARSSIAYEIVPRSRFEQNIKEQHLWEPLAYYFMFSS 118 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 + + G ++Y+ +R L+++++ +EELR +YI ++T +SRS + ++L+ Sbjct: 119 KRFLQNNFISSGVSTYDLVRNNLIALMNEDEELRLATNTCDYIQEKTLLSRSGIMKMLSD 178 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+ G +IE+++G L+ IN LP++Y Sbjct: 179 LKHGSHIELHRGVLITINNLPAKY 202 >UniRef50_UPI00019F10BE putative transcriptional regulator protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F10BE Length = 217 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 5/205 (2%) Query: 6 KPLQEFGKLDKCLS--RYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIG 63 KP+Q L LS R T F+ +K S+ + V+LEG +RR + +++ Sbjct: 15 KPVQHINALIGPLSCDRRVTVFDAGTQKPFPHISE-HVGPIIVVLEGGFEIRRTDGLVLV 73 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 PY++GL + L + + L ++ ++++ LW LAWQ Sbjct: 74 RGGGPYVLGLGEALYGRG-RHTIYCTTALNIVSLSKEEAFEIVDKESLWSHVANLLAWQL 132 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 +++ RD +L ++Y IRA L + + ++++I QRT +SRS++ +V++ Sbjct: 133 QLMVARDEELTSVDAYTMIRAKLSELYMLKTQFGLSFNIVDFIQQRTNLSRSIIHQVISE 192 Query: 184 LRKGGYIEMNKGKLVAI-NRLPSEY 207 L++G YI + +G+LV + + LP +Y Sbjct: 193 LKRGEYITIVRGRLVDMKSSLPQKY 217 >UniRef50_UPI00019F1389 hypothetical protein CATC2_03035 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1389 Length = 231 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 101/208 (48%), Gaps = 6/208 (2%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVIS-LRREENVLIGI 64 KP++ L L YG + K + + + +I +G++S + + + Sbjct: 24 KPMKAIEALFLHLLPYGRKILLKKNKCYRLNEEQDGIGLVLITDGLVSAINSDTGHFVST 83 Query: 65 TQAPYIMGLADGL-----MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 P ++GL G + I L +E + + + +P ++ + + ++ +LW L Sbjct: 84 LYPPSLLGLCHGYSAFYNVPGRIRSTLHAETDVSLFFIPLQRFVDVADKEELWHHVARIL 143 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 A + + ++ IG +SY I++ + + + E R+ I + ++I +++ +SRS + + Sbjct: 144 AHRIITMVNKEKTYIGMDSYTIIKSIIEEVWLYPENYRTHISLPHFIQKKSGLSRSRIMK 203 Query: 180 VLAALRKGGYIEMNKGKLVAINRLPSEY 207 +L L+ GGYI + KG+L ++ +LP Y Sbjct: 204 ILLDLKIGGYINIVKGRLTSVTKLPLSY 231 >UniRef50_C1M4J5 CRP/FNR family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=C1M4J5_9ENTR Length = 209 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 4/205 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 V+P Q +L + L + + +++++ N ++ L+G +S+ R + +LI Sbjct: 7 VRPEQSIQRLMQALEPIAEKMKVVPRRRIMWKYK-NKPQLYLFLQGELSILRSSDGLLIV 65 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 P++ G+A+ + + L +E T + A + L Q LW DA L++ Sbjct: 66 TVYEPHLFGIAEMIQP-VHGHLLRAEAESTLLRVDADKARELFHQQGLWEDAAAVLSYHT 124 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 L RD ++ +Y IR L MI EE R R+ +++YI RT +SRS V V++A Sbjct: 125 GYLFYRDDLVVQQRTYSVIRNHLEEMILLPEETRKRVSILDYIQDRTHLSRSSVLNVVSA 184 Query: 184 LRKGGYIEMNKGK-LVAINRLPSEY 207 L+KGGYI+ +G L +IN+LP + Sbjct: 185 LKKGGYIDFERGGYLTSINKLPERF 209 >UniRef50_A4W7R9 Putative inner membrane protein n=1 Tax=Enterobacter sp. 638 RepID=A4W7R9_ENT38 Length = 202 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIG 63 +KP K+ + +S TR E+++I + TF++ G +++ R +++L+ Sbjct: 1 MKPENHILKIIEAISD-PTRIRNGRERKIISVDNYEEAMTFILHSGTVAIHRSSDSLLLK 59 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 +AP I+G+ + L+ + + + + + L K I +IE+ LW++A Y+ + Sbjct: 60 FVEAPMIVGM-NILIDTNEGFYMQAHSDVEYEILSNKSVIDIIERENLWKEAAYFFMFGV 118 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 + L G +YE I+ L+S++ +ELR + +YI +T ISRS V ++L+ Sbjct: 119 QRLLEAHQTSAGRTTYELIKQNLMSLMAEKDELRMMVNACDYIMDKTHISRSRVMKILSD 178 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+ G YI + +G L+ IN+LP Y Sbjct: 179 LKTGDYIVIERGVLIKINKLPETY 202 >UniRef50_B5BAM2 Putative transcriptional regulator protein n=33 Tax=Salmonella enterica RepID=B5BAM2_SALPK Length = 223 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 7/208 (3%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIGI 64 K LQ + + + + + K + D N +I +G I + RR +++++G Sbjct: 17 KNLQAILNIHRHVIQNISPVTITAGKTLDIKID-NRSHILLITKGAIKVCRRIDSIVMGC 75 Query: 65 TQAPYIMGLADGL-----MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 +P I+GL D ++ + I+E C Y +P K + + ++ LWRD L Sbjct: 76 GVSPMILGLVDAYADLYQLEENSDVFFIAETTCEYYPVPVKDFVEIADEKHLWRDISNIL 135 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 ++ + RD LIG ++Y QI+A LL + + E R I N+I QRT +SRS + + Sbjct: 136 MYRIAFMTNRDRNLIGQDAYSQIKALLLELWSYPESSRFEINAQNFIQQRTGLSRSRIMQ 195 Query: 180 VLAALRKGGYIEMNKGKLVAINRLPSEY 207 VL+ L+ G YI++ G+L+ + LP + Sbjct: 196 VLSELKAGDYIKILHGRLLELRNLPVSF 223 >UniRef50_A8GI54 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Serratia proteamaculans 568 RepID=A8GI54_SERP5 Length = 226 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 7/204 (3%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIGI 64 KP +L L +Q N F++L+G ++L R +++L+ Sbjct: 28 KPSDIIARLMAELKPEAVEVTARRSRQFS----GKNPQVFLLLQGAVNLHRQSDDLLMTT 83 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQN 123 AP+I+GLA+ L Y L E +C + + + + ++Q+ LW D LA+Q Sbjct: 84 IYAPHIIGLAELLHPVGQTY-LHLEKDCEIHVVAGSKVLQKLDQHPMLWADVSRILAYQL 142 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 LRD+ L+ +++Y+ IR LL +I+ E R + YI +RT ++RS + + L+ Sbjct: 143 HFASLRDLHLLNNHAYDAIRGKLLELINAPESTRLDYSALRYIQERTTLARSTILKCLSD 202 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+ GGYI M KG L + LP Y Sbjct: 203 LKTGGYIAMEKGHLTQVFNLPQRY 226 >UniRef50_B5XTC2 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=B5XTC2_KLEP3 Length = 248 Score = 182 bits (462), Expect = 7e-45, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 7/210 (3%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 KPL L + F F ++ EG+ SL E N++I Sbjct: 39 TKPLFAVESLLSAFLPASSPFALPRSTYYRFPPIQAESGLILLEEGIASLCHAENNMVIS 98 Query: 64 ITQAPYIMGLADGL-----MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 +P ++GL DG + L +E + G+ + + + ++ LW++ + Sbjct: 99 TIFSPSLLGLIDGYGVFNGIPEKHHCSLFAETDLRGHWIAHQAAVEILNAQNLWQEMAHV 158 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 LA + +L +R +++G +SY +R L + D+ E R +I V+++I +RT +SRS + Sbjct: 159 LAQRLMVLSMRSQEMMGVDSYLMVRTLLTELADYPEAYRRQINVLSFIQRRTNLSRSRIM 218 Query: 179 EVLAALRKGGYIEMNKGKLVAI-NRLPSEY 207 +L+ LRKG YI +++G L I + LP+ + Sbjct: 219 SILSELRKGDYITIHRGVLRTIAHPLPAHF 248 >UniRef50_UPI0001C342D9 hypothetical protein CATC2_07960 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C342D9 Length = 212 Score = 182 bits (461), Expect = 9e-45, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 3/205 (1%) Query: 4 VVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL-I 62 ++ P + L + + K++ S +++L+G +S R++N + + Sbjct: 10 LMTPSPFTESIIAKLEPHCEIRNISPRKRLYPKSG-GKYYCYLLLKGYVSYHRDKNDIAV 68 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 AP + GL + + +I + + +P ++ I +IE++ LW+ + Sbjct: 69 LTASAPTLFGL-NYIASENITTYIKTLPPAIIGVMPLEKAIEIIEEHHLWKAVAQHMMVL 127 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 + L + + Q+ SYE I+ LL ++ NE R I +NYI +T++SRS + +L Sbjct: 128 SNKLYIINEQMSAPTSYELIKFLLLQLMSENESYRKSITAVNYILGKTQLSRSGIMRILT 187 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 L+ GGYIE+++G L+ +N+LP+++ Sbjct: 188 NLKAGGYIEIHRGCLIRLNKLPAKF 212 >UniRef50_B5XXF5 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B5XXF5_KLEP3 Length = 209 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 3/197 (1%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIGITQAPYI 70 +L L Y T + +Q+ F + ++ILEG +++ RR +N+++ ++P + Sbjct: 15 QELITHLQPYCTPRKTERGEQLDFKVNGQ-GVCYLILEGTVAVYRRNDNMMLSTARSPAV 73 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRD 130 GLA+ L + + C + + +I++ LW L + L Sbjct: 74 FGLAN-LTDIYFDDYIKTINPCLIGEISTARVNDIIKEKSLWGLLSKQLMFVYGRLYNNV 132 Query: 131 VQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYI 190 + +YE IR LL++I+ +E R+ + YI ++T +SRS V +LA L+ GG+I Sbjct: 133 MPQGAPTAYEMIRQQLLNLIEEDESYRAAVTAELYIREKTHLSRSGVMRILADLKTGGFI 192 Query: 191 EMNKGKLVAINRLPSEY 207 EM +G+L+ I++LP+ Y Sbjct: 193 EMEEGRLIKIHKLPARY 209 >UniRef50_A7MR68 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MR68_ENTS8 Length = 219 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 6/203 (2%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGI- 64 +P + +L L G F + + + VI +G +S+ R + L+ I Sbjct: 22 RPEEAINQLIDALKISGELRRFASGAHI----PAQPDHIIVIEQGALSMHRMMDGLMMIE 77 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNR 124 + P ++G+ + + + +E C +P +IE QLWR+ ++W Sbjct: 78 STRPQLLGITYN-NQFSHHFTIKAESVCEARLVPRSDFEAIIETRQLWRELLLVVSWYYD 136 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAAL 184 +L + +G SY IR L+ + NE+ R I ++I +T +S+S + +V + L Sbjct: 137 VLYWKSYHYLGRQSYTLIRNCLIELAAKNEQEREEINACDFIRGKTNLSQSYILKVFSDL 196 Query: 185 RKGGYIEMNKGKLVAINRLPSEY 207 RKG YI++++G+L +IN+LP Y Sbjct: 197 RKGDYIDISRGRLKSINKLPDRY 219 >UniRef50_A7MEB9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MEB9_ENTS8 Length = 208 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 6/204 (2%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIGI 64 +P + L +GT E+ + N E ++L G ++L R+ +N++ Sbjct: 9 RPDAQINALINAFHCHGTIKEYPRGSCLA----QNEESVNILLSGSLALTRDWDNLIFFE 64 Query: 65 TQAPYIMGLADGLMKNDI-PYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 T P I G++ ++LI + + + + +IE+ +LW++ + +++ Sbjct: 65 TNRPNIFGISLQSNNARFEHFRLIIKEDSLVKRISRADFLAVIEEQKLWKELSHVISFYY 124 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 +L ++ +SY +R +L+++ + E R I YI T +S+S V +V+ Sbjct: 125 HVLLWKNYHFYAADSYMLVRKSLITLGEMPLESRININASQYITSTTNLSKSYVMKVIQE 184 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 LRKGGYIE+ +G+L+ I +LP +Y Sbjct: 185 LRKGGYIEIQRGRLITIGKLPQKY 208 >UniRef50_A4WAX1 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAX1_ENT38 Length = 221 Score = 172 bits (435), Expect = 8e-42, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 5/206 (2%) Query: 3 SVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVL 61 S+ KP +L L+ + + + F N + +++ EG + + RR++ + Sbjct: 18 SIEKPQDHILRLISTLAPHSQLVPADKLPTLDFVR-TNTKLCYLLEEGHVIINRRDDGMT 76 Query: 62 IGITQAPYIMGLADGLMKNDIPYKLISEG-NCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 + AP++ G L N P I + L + I +IEQ LW L Sbjct: 77 LNTESAPFVFGFT--LNSNLHPRLCIRPSPDAVLRRLSLENAIQIIEQESLWEPLAQLLI 134 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 + + L +L YE +R+ L+ +I+ + ++R NYI R +SRS + + Sbjct: 135 FISARLFRHCTRLSQSGMYETVRSLLIELINESPKIRQAESTYNYIQNRCLLSRSGIMSI 194 Query: 181 LAALRKGGYIEMNKGKLVAINRLPSE 206 LA LR G+IE+ G+LV IN LP + Sbjct: 195 LATLRAHGHIELENGRLVKINNLPQK 220 >UniRef50_C9XZ73 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XZ73_CROTZ Length = 203 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 10/203 (4%) Query: 6 KPLQEFGKLDKCLSRYG--TRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLI 62 KPL E ++ + YG +R E N + + + +I G SL R+ + +L+ Sbjct: 6 KPLAEIYRIADIFNSYGNWSRAEKNT------LIPLRDGEICIIRGGQFSLMRQSDRLLL 59 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 + AP ++GLA L K+ KL ++ C +P + IE+N +W Sbjct: 60 EKSSAPSVLGLARNLGKSQFA-KLQADSECHYQLIPFDYFMQEIEKNHCQLHLLILSSWI 118 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 IL R+ +IG NS+ I+A + + +E +R+RI V +YI ++T +SRS+V + L+ Sbjct: 119 INILCYREEIMIGRNSFSMIKANIDCLAAMDEFMRNRINVADYIVKKTNLSRSMVMKTLS 178 Query: 183 ALRKGGYIEMNKGKLVAINRLPS 205 LR IE++KGKLVA++ LP Sbjct: 179 QLRSAKNIEISKGKLVAVHHLPD 201 >UniRef50_A8AIP5 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AIP5_CITK8 Length = 207 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 6/204 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGI 64 ++P E ++ S Y + +K + ++E +I+ G + RR + L Sbjct: 9 IRPHHEMERIISLTSGYKEKTLKKWQK----ITTSDSEYIHIIVSGDVEFRRTSDELCMF 64 Query: 65 T-QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 T Q I GL+ + + ++ N + + + L+ ++ LW D L+W Sbjct: 65 TLQGQCIFGLS-AIFYGSLHMYGLARTNTVVRSIKKDEFMRLLTEHSLWPDLTRVLSWYI 123 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 +L RD L+ ++Y IR L+ + + I V +YI + T +RS + ++L+ Sbjct: 124 CLLSKRDDVLVARSAYSVIREFLIEINELIIHHNRDINVYDYIQEYTNFARSTIIKILSD 183 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+KG YI + K +L+++ LP +Y Sbjct: 184 LKKGNYIVIEKSRLMSMTTLPEKY 207 >UniRef50_A8AFU0 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8AFU0_CITK8 Length = 210 Score = 166 bits (420), Expect = 4e-40, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 13/189 (6%) Query: 20 RYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN-VLIGITQAPYIMGLADGLM 78 G+RF F GV+S+ EN +L+GI AP +G L Sbjct: 34 PRGSRFVFVQG---------GEHQCLFFRTGVVSIENIENSLLLGIASAPVSLGFTSALS 84 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNS 138 + + + C +P + IE+ LW + L +++ + Sbjct: 85 DKLL---IRALEECEAATIPLDDVMETIERKHLWEIMAKHMIIVTNKLFIQNEMATAPTA 141 Query: 139 YEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLV 198 Y+ + L ++ E +RS++ YI +RTR+SRS V ++L+AL+KGGYIE+ +GKL+ Sbjct: 142 YDLLCYQLQALSQEPESIRSQMAAYQYILERTRLSRSSVMKMLSALKKGGYIELEQGKLI 201 Query: 199 AINRLPSEY 207 AIN LPS + Sbjct: 202 AINHLPSRF 210 >UniRef50_A4WAX2 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAX2_ENT38 Length = 208 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 8/205 (3%) Query: 4 VVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLI 62 + +P +L + L+ + + + + + +I G I + R + +LI Sbjct: 11 LNQPFPWAKQLVESLAPFA-PIRSYRKGIRLGLIENGVQVCRIIHSGTIEVHRSSDGLLI 69 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 AP I+GL +++ L ++ I +N LW A + Sbjct: 70 VTLPAPGILGLG------VHDAFIVTAETSKVSTLTVEELQRHISENGLWEVAAQHMMVV 123 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 L QL +YE IR L + R + + YI +T +SRS + ++LA Sbjct: 124 TNKLYSYSKQLSAPTAYEVIRNQLRELSHEPAHFREHVTIERYIRDKTHLSRSSIMKILA 183 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 L+ GGYI + G+L I LP++Y Sbjct: 184 ELKTGGYIVIKDGRLCEIKHLPAKY 208 >UniRef50_UPI00019F1602 hypothetical protein CATC2_05660 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1602 Length = 212 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 3/193 (1%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIGITQAPY 69 L L I +++ EG I +RR + +++ QAP Sbjct: 19 IAILFNALLPLSEAQSLYRSGSFI-MDSQGENGIWLLTEGRIVIRRRIDGLILASQQAPM 77 Query: 70 IMGLADGLMKN-DIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILEL 128 ++G+A+ + + Y + + CT + + +T++ +++LW A+ +++ Sbjct: 78 MLGMAEFFLPTGNNFYDIEAVSPCTTHVVKKTDFMTIVNRDRLWESVAIVEAYIIQVMSQ 137 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGG 188 RD + + + + L + +++R RI + YI +RT +SRS + + LA L++ G Sbjct: 138 RDRLITSRTATDMVWGHLELLQQEPDDIRKRIPAVQYIRERTGLSRSTIMDTLARLKRQG 197 Query: 189 YIEMNKGKLVAIN 201 I++++G L+ I+ Sbjct: 198 AIQLHRGHLICIS 210 >UniRef50_UPI00019F17B7 hypothetical protein CATC2_24059 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17B7 Length = 214 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 9/212 (4%) Query: 3 SVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNN--EDTFVILEGVISLRREENV 60 + KP+ K+ F + K + + + F +L+G E Sbjct: 5 DIEKPIDSIEKVMAHF-PVTQPFLMESGKILPLKQKNDTIPKKIFFLLDGAFIGSTGEGD 63 Query: 61 L---IGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFY 117 +GI +P I+GL L + + S C + +I+ N LW D Sbjct: 64 KKCNLGIATSPAIIGLGQ-LGGTNAFIEFESISPCLIDTINLDDFCNIIDNNNLWLDICK 122 Query: 118 WLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNE-ELRSRIGVMNYIHQRTRISRSV 176 + L +R ++YE IR+ L+ M + ++ R V+ Y+ +R+SRS+ Sbjct: 123 IMIPALGTLSIRASTSGLQSAYEIIRSYLIYMDNEKSFSIKERYTVVKYMQTFSRLSRSM 182 Query: 177 VAEVLAALRKGGYIEMNKGKLVAINR-LPSEY 207 + ++LA L+ GG+IEM GKL+ INR LP ++ Sbjct: 183 ILKILAELKVGGFIEMENGKLIRINRNLPEKF 214 >UniRef50_UPI0001C33F28 CRP/FNR family transcriptional regulator n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33F28 Length = 206 Score = 154 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 5/200 (2%) Query: 4 VVKPLQEFGKLDKC-LSRYGTRFEFNNEKQVIFSSDV--NNEDTFVILEGVISLRREENV 60 ++KP E + LS R +E + + V NN D + EG + +RR + Sbjct: 1 MMKPNDEMKLIISKWLSSGAARIIIKSEIGIERTLGVKPNNTDFVFLTEGAMDIRRTMDD 60 Query: 61 LIGITQ-APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 L+ T APYIM D Y I + Y + + + L+E+ L+++ + Sbjct: 61 LVFCTALAPYIMSGTDHPESEAYFYGEI-RAHSVAYRIKKETALNLVEKFNLFKELWIVE 119 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 ++++ + RD L G + I + + E R I V ++ +RT+ S+S + Sbjct: 120 KYKSQAIWRRDANLNGASVKVAIGELITVLSMLPPEFRKSISVYKFLQERTKYSKSTIMR 179 Query: 180 VLAALRKGGYIEMNKGKLVA 199 V+ R G +++ G L+ Sbjct: 180 VVNHYRDNGQLDIKNGILIE 199 >UniRef50_C1MAT1 Predicted protein n=2 Tax=Citrobacter RepID=C1MAT1_9ENTR Length = 201 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 40 NNEDTFVILEGVISLRREENVLIGIT-QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLP 98 + + +G +S+ R EN L+ ++ AP I+GL + + L + +C + + Sbjct: 38 TDGQILFLEKGTVSVYRVENDLVTVSISAPAILGLPQ-MRTEVAGHYLRCDTDCEMWAMS 96 Query: 99 AKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLS----MIDWNE 154 + L LW+ AF L + R Q S+ IR ++ + Sbjct: 97 VQNADHLFTTKNLWKQAFDILTHHLQ----RYFQREALQSHRTIREQIIEHVKYIWSMEP 152 Query: 155 ELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 E+R + V +I R ISRS + +VL L G I +N+GKL Sbjct: 153 EVREKTSVYTFILTRNHISRSAIHKVLQELVNDGKITLNRGKL 195 >UniRef50_C4X4Z2 Putative uncharacterized protein n=4 Tax=Klebsiella RepID=C4X4Z2_KLEPN Length = 255 Score = 92.8 bits (229), Expect = 7e-18, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 40 NNEDTFVILEGVISLRREENV-LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLP 98 + +L+G ++L + L+GI A +GL + + Y G C + Sbjct: 84 QPGYLYFLLQGQMTLAFGDEQNLVGIVIAHMPLGLLEHYCPSVALYY-QCLGECQLAKIT 142 Query: 99 AKQTITLIEQNQ--LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATL-LSMIDWNEE 155 A + + ++ LA+ + S++ I++ L + + Sbjct: 143 ASDFERIFFHSSPGYMQELTTILAYMGIFALDAHYERGSQTSFQTIKSMLSRYLYRGEID 202 Query: 156 LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN-RLPSEY 207 + +I +RT +SRS V +VLAALR+GGYI + KGKL++I+ +P ++ Sbjct: 203 GGQHESLSAFIIKRTNLSRSYVYQVLAALREGGYITVKKGKLISIDRHIPEKF 255 >UniRef50_C4XB37 Putative uncharacterized protein n=2 Tax=Klebsiella RepID=C4XB37_KLEPN Length = 211 Score = 86.2 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 6/173 (3%) Query: 40 NNEDTFVILEGVISLRREENVL-IGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLP 98 + EG +S+ +N L IG + +GL + ++ G T + Sbjct: 40 ETGYIYFCTEGSLSILMPDNGLSIGNSIEHMPIGLMERYCP-LAKFEYTGSGPVTLRKIT 98 Query: 99 AKQTITLIEQNQLW--RDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLL-SMIDWNEE 155 L +N L + + + SY+ IR L + + Sbjct: 99 YAAFDRLFIENHPQRVEALAKVLVFMSIFTIDLHNERRQVTSYQTIRPMLYRYLYRQHTH 158 Query: 156 LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR-LPSEY 207 G+ +I +RT +SR+ V VLA L+ GGYI M +GKL++I+R LP+EY Sbjct: 159 EGENEGLALFIIRRTNLSRTHVFRVLADLKAGGYITMKRGKLISIDRPLPAEY 211 >UniRef50_C6DJ46 Putative uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DJ46_PECCP Length = 203 Score = 78.5 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 76/192 (39%), Gaps = 3/192 (1%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIGITQAPY 69 K+ S T + K++ F + + + EG +++ ++ +I + +P Sbjct: 11 ITKILSPHSNIATPTKVIKGKRLYFFYPSGEQVIYFLDEGTFLMKQSIDDKVISVILSPA 70 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELR 129 I+G + + Y + +P + +I + + D + L Sbjct: 71 IVGWSMVTLDGGELYLERVDYG-KIRSIPFNTAMRIITAYERFDDVLTIVNTGFHALIDH 129 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGY 189 + G +S + L S+ +++ R ++YI QRT +S+S + L L++ G Sbjct: 130 CIGNHG-DSLSIVHKMLRSLNQLPPDVKLRFSALSYISQRTSLSKSTIKRGLKQLQQQGL 188 Query: 190 IEMNKGKLVAIN 201 + + GKL + Sbjct: 189 LTLEHGKLRHLT 200 >UniRef50_D2TRD7 Putative uncharacterized protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TRD7_CITRO Length = 231 Score = 72.3 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 9/191 (4%) Query: 12 GKLDKCLSRYGTRFE---FNNEKQVIFSSDVNNEDTFVILEGVISLR---REENVLIGIT 65 K+ LS + T + K+ S ++ F ILEG L+ + E ++ I Sbjct: 34 DKIITSLSEHSTLAQPDSIIRGKRRYNLSHEHSRRIFFILEGDFLLKMRVKNEEKMLNIL 93 Query: 66 QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRI 125 APY++ + L + +P L + L + L+ + L D L+ Sbjct: 94 SAPYVVDVTPAL--DALPLYLERVDYGRVHSLSYDRFWQLVREKDLLDDTMSILSGHYSD 151 Query: 126 LELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALR 185 L L + +SYEQ+ + + L+ R + I + +SRS + VL L+ Sbjct: 152 L-LNYITTSKSSSYEQVISLIERWQRLPSHLKKRFSALYLIENSSWLSRSSICRVLKELK 210 Query: 186 KGGYIEMNKGK 196 G ++++ G+ Sbjct: 211 DRGELKLDNGR 221 >UniRef50_C1DB51 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB51_LARHH Length = 220 Score = 62.3 bits (150), Expect = 9e-09, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 11/200 (5%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLI-----GITQAPYIMG 72 L R G F +++ + + D F +++G+++ + + G +A +G Sbjct: 22 LLRQGELVTFEP-DELVCEQNTVHSDVFFLIQGLMNATMQTGEGLRPFAFGYIKAGSCIG 80 Query: 73 LADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDV 131 L + + + + + + T ++++ Q W+ +A L Sbjct: 81 LPALAGQTLLNATVHAVHPSQCWKISTDLLETAMDRHPQAWKTCAQQIALGVAHLLDYIE 140 Query: 132 QLIGHNSYEQIRATLL---SMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGG 188 L + Y ++R L M + +R +SR +V ++ ALR+GG Sbjct: 141 MLAQPDGYTKLRRLLEKMDEMARECPAFPPAPITQRDLGERIGLSREMVNRMMRALRQGG 200 Query: 189 YIEMNK-GKLVAINRLPSEY 207 YIE+++ G++ LP + Sbjct: 201 YIEVDEFGRIRVTKPLPRRF 220 >UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=3 Tax=Gammaproteobacteria RepID=Q2SDD5_HAHCH Length = 216 Score = 57.7 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 8/200 (4%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYI 70 + L ++ F + ++ + +++ ++I+ G + + + V + +A Sbjct: 18 LQHLEKHA-VFRCFQKNSIVITEGDHSDSLYIIVSGRVRVFCSDENGKEVTLNDLKAGEY 76 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELR 129 G + +++ C L + Q L + L + R L Sbjct: 77 FGELALFDDKERSASVMATEPCRFLMLNKSSLLEAFRQTPDLAYNLIIHLTQRVRALTNN 136 Query: 130 DVQLIGHNSYEQIRATLLSMIDWN-EELRSRIGVMNY-IHQRTRISRSVVAEVLAALRKG 187 L + Y ++ +TLL + + + L + I + I R SR +V+ ++ L G Sbjct: 137 VKNLALMDVYGRVASTLLQLSERKGDRLITEIPLTQQEIANRVGASREMVSRIMKDLEIG 196 Query: 188 GYIEMNKGKLVAINRLPSEY 207 GYI++ K K+V + LP+ Y Sbjct: 197 GYIKVEKKKIVINDALPAHY 216 >UniRef50_B1G1H4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1H4_9BURK Length = 254 Score = 55.4 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 28/208 (13%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQ 66 ++ S + T + VI+ D ++E +++ G + L R + + + + Sbjct: 18 LDEVMPAFSDHRTLRKNA----VIYRPDESSEHVYLLKSGSVRLYRLTEDGQEITLAFVK 73 Query: 67 APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRIL 126 A I G D L + + + + ++ L+ + D +N L Sbjct: 74 AGMIFGDGDVLNEENYSHHAQALTPSMVCYIRKADFKELLARY----DVINQFVLRNHYL 129 Query: 127 ELRDVQ-LIGHNSYEQIRATLLSM----------IDWNEELRSRI-----GVMNYIHQRT 170 ++ Q LI + S +R L+++ + E I + + + Sbjct: 130 RWQEAQQLIENLSLHDVRKRLVNILVMFAGQVGAAHEHPEHGDTILIDLPIAQDKLAEFI 189 Query: 171 RISRSVVAEVLAALRKGGYIEMNKGKLV 198 SR V + L+ G+++M++ K+V Sbjct: 190 GTSRESVNRHFSDLKAEGFVDMHERKIV 217 >UniRef50_C6L0Y1 Crp/Fnr family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6L0Y1_9BACT Length = 216 Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 13/177 (7%) Query: 41 NEDTFVILEGVISLR----REENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYH 96 ++I+EG + + ++ V + G LM + +++ + Y Sbjct: 43 PTSMYIIVEGRVRVYIADENQKEVTLNTQGPGEYFGELAILMDSPRTASVMTTEDSAFYV 102 Query: 97 LPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIG---HNSYEQIRATLLSMIDWN 153 + + + + R AF + R + ++ G +N Y ++R L+S Sbjct: 103 MEKDEFKDFLAAHP--RSAFALIQSLARRVADLTDEVSGLALNNVYGRVRNLLVSQAQQ- 159 Query: 154 EELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 + R + I +R SR +V+ + LR GGYI + + LP+++ Sbjct: 160 QNGRKVVAEKMTQQDIARRVGASREMVSIIFKDLRAGGYITVEGSHIFINKHLPAQW 216 >UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicobacter RepID=C3XLC9_9HELI Length = 202 Score = 50.4 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 14/179 (7%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRRE---------ENVLIGITQAPYIMGLADGLMK 79 N+ +++F N + F++L G + + + + +P + L+K Sbjct: 27 NKDEILFFEGENPKKLFILLNGKVRIYKSIQPIKDIAPREKTLHYITSPSFLAEMPSLLK 86 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSY 139 P I +C + + +N L LI S+ Sbjct: 87 QPFPASAICTEDCEVLEISLEAFQKQCTEN---PHFCQQLIASLCQKIRILETLI-MESH 142 Query: 140 EQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLV 198 ++ L+S + N + I + S ++ + L+ G IE KGK++ Sbjct: 143 LSLKDKLMSFLQENTQ-NLNTLTQREIAKHLNTSPESLSRTIRELKTQGRIETKKGKII 200 >UniRef50_B9Z4U0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Chromobacterium group RepID=B9Z4U0_9NEIS Length = 227 Score = 50.4 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 13/202 (6%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV---LIGITQAPY-IMGL 73 L + F N+ +++ EG I + + + + P +MG Sbjct: 27 LIDLAVPLNLRKGDPL-FLEGGNSAAIYLLTEGRIESFVSDGMGKKFVFMFNEPGELMGE 85 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQ------NQLWRDAFYWLAWQNRILE 127 L + ++E +C +++ + LA R + Sbjct: 86 VSYLDGGPCAWSAVAERDCQLLMFRRTDLVSVFGVADGLPCETIRSKILLRLAGMVRRIS 145 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRS--RIGVMNYIHQRTRISRSVVAEVLAALR 185 L + Y +IR ++ + + + I + SR +VA +L L Sbjct: 146 TSAKNLALLDVYGRIRILFNELMVEEDGVLQLDKPLTQQEIADQIGSSREMVARILKELV 205 Query: 186 KGGYIEMNKGKLVAINRLPSEY 207 G YI M ++V + LP + Sbjct: 206 YGHYIRMENRRIVLLKMLPENF 227 >UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XZU1_9GAMM Length = 222 Score = 50.0 bits (118), Expect = 5e-05, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 72/185 (38%), Gaps = 6/185 (3%) Query: 13 KLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAP 68 KL L +G + Q +F ++ +V+L GV+ + + ++ A Sbjct: 21 KLKMFLLAHGKVLTLKAQ-QALFLRGDAHDGIYVVLSGVMRISGVNSNGKEAVLSFIDAS 79 Query: 69 YIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILE 127 G K + + ++ + +++P + L+ ++ + W++ LA + R++ Sbjct: 80 LWFGEVTLFDKGLRTHDVYAQTDAQLFYVPQRSLEQLLSKHPEYWQEFGLLLAQKLRLMF 139 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 H++ +++ LL + + + T ++R + ++L L K Sbjct: 140 SSMEDHALHSAEQKVCNRLLMLSEQTNFSAPLALSQQQLADMTYLTRQTINQILQKLVKK 199 Query: 188 GYIEM 192 I + Sbjct: 200 NAISL 204 >UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8Q5_OXAFO Length = 215 Score = 49.6 bits (117), Expect = 6e-05, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 77/195 (39%), Gaps = 14/195 (7%) Query: 10 EFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVI--SLRREENVLIGIT-- 65 KL++ L + R ++ I ++ EG + S+ + I I Sbjct: 18 SMEKLEEFLEKTPCRLAHYETREHIAMQGAPCRAFILLCEGQVRASMIGTDGRQITIEDH 77 Query: 66 QAPYIMGLADGL-MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQN 123 +AP ++ N P +I+ C + + + L+ + ++ L+ ++ Sbjct: 78 EAPMLLASNFVFATHNHFPVDIIAITPCEIMVIEKEPFMELMCTEPVVLQNFLRILSDRS 137 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 IL + L+ +I A LL +E+R++ V +Y+ ++R +A VLA Sbjct: 138 HILSRKLGSLVLLKLKNRIAAYLLEH----QEIRNQQEVADYL----GVARPSLARVLAE 189 Query: 184 LRKGGYIEMNKGKLV 198 L + G + ++ Sbjct: 190 LAQEGSVLFENRRVT 204 >UniRef50_B5JTW7 Cyclic nucleotide binding protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTW7_9GAMM Length = 615 Score = 49.2 bits (116), Expect = 8e-05, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 2/105 (1%) Query: 16 KCLSRYGTRFEFNNEK--QVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGL 73 LS E + ++ QV+ + + + + G + L R + L A ++ G Sbjct: 24 DALSAMARSIEVSYQQAGQVVLALEDPIHHLYFVRSGEVELFRRDGSLFNRLPAGHVFGQ 83 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 LM + + + +C Y +P + + E+ + D F Sbjct: 84 MGLLMNAKVRFPATTRKDCLFYLIPIQLFMDYCEKYSEFGDFFEV 128 >UniRef50_A2RDI8 Crp family regulatory protein n=26 Tax=Streptococcus RepID=A2RDI8_STRPG Length = 226 Score = 49.2 bits (116), Expect = 8e-05, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 71/187 (37%), Gaps = 10/187 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKN 80 F + ++F + F++ G + + + + + I + Sbjct: 33 FRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDD 92 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNRILELRDVQLIGHNSY 139 + +++ + T ++ P +N+L + + ++ + ELR LI ++ Sbjct: 93 YYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSAS 152 Query: 140 EQIRA----TLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 ++ L+ M ++ L ++ + I Q + +R V+ VL L+K I + Sbjct: 153 SRVIQSLAILLVEMGKDSDTLPFQLTTTD-IAQISGTTRETVSHVLRDLKKQELITIKGK 211 Query: 196 KLVAINR 202 L +++ Sbjct: 212 YLTYLDK 218 >UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n=6 Tax=Gammaproteobacteria RepID=Q3JC77_NITOC Length = 214 Score = 48.9 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 7/174 (4%) Query: 41 NEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYH 96 ++ ++IL G + + + V++ +A G L K +++ Sbjct: 41 SDSLYIILSGKVKVYISDEGGKEVILRTQKAGEYFGELALLDKGPRSASVMTLDKSRLSV 100 Query: 97 LPAKQTITLIEQNQLW-RDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWN-- 153 + + ++ + L + R L L + Y ++ TLL + Sbjct: 101 VSKTIFNRCLTEHPDFALKLLCALTQRVRSLTENVKNLALLDVYGRVARTLLDLAIEKGG 160 Query: 154 EELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 + + I QR SR +V+ ++ L GGYIE+ ++ +RLPS + Sbjct: 161 KLIIEERPTHQEIAQRVGASREMVSRIMGDLATGGYIEVTSKTIIIPHRLPSAW 214 >UniRef50_C4KZ85 Transcriptional regulator, Crp/Fnr family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KZ85_EXISA Length = 229 Score = 48.5 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 24/205 (11%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAP 68 + +L + Y + Q++F E + ++ G I L R N A Sbjct: 22 RALEQLVPHV--YCRTYRKG---QLLFMEGDPRERVYFLMSGYIRLER-MNEHATHQYAD 75 Query: 69 YI-----MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 Y+ + D + + + ++P ++ + Y + N Sbjct: 76 YVKPKQFFPYNGLFTEEDYRHTAEAVTDIDVIYIPTERFERFVSTQS--NMLLYIIGQMN 133 Query: 124 RIL---ELRDVQLIGHNSYEQIRAT---LLSMIDWNEE----LRSRIGVMNYIHQRTRIS 173 RIL E R ++I ++ E++ T L+ + +E +R M + + + S Sbjct: 134 RILDLHERRVQEIITPSAKERVLNTIHFLIEDLGEPDEQGVRVRCPFTAME-LSRLSGTS 192 Query: 174 RSVVAEVLAALRKGGYIEMNKGKLV 198 R V+ +LA LRK + M+ +LV Sbjct: 193 RETVSTILAKLRKEEVLRMDDHQLV 217 >UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWR3_HALOH Length = 226 Score = 48.1 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 62/175 (35%), Gaps = 11/175 (6%) Query: 34 IFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIPYKLISE 89 IF + + + +G + +++ ++ I + G + P ++ Sbjct: 42 IFFEGEEGDRVYFLKKGRVKVKKTSPDGGEQILEIITPGDVFGEVVLFGIDRYPATTVAI 101 Query: 90 GNCTGYHLPAKQTITLIEQNQL--WRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLL 147 G +L + N W +A + + R L ++ ++ ++ Sbjct: 102 GEVVVDYLSRSKFRRYFTNNPEIGWGML-KVMARKLARSQKRIENLGLRDTKGRVATLIM 160 Query: 148 SMIDWNEELRSRIGVMNY----IHQRTRISRSVVAEVLAALRKGGYIEMNKGKLV 198 M+ E +++ +++ + SR V+ L+ + G I++ KL+ Sbjct: 161 DMMRDFGEKNNQVVKLHFNRQELANFIGTSRETVSRTLSEFKSEGLIDIKGKKLI 215 >UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PAL9_CHIPD Length = 352 Score = 47.7 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 70/186 (37%), Gaps = 17/186 (9%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPY 84 +KQ+I+ + I +G + + N + + + A +G L ++ Sbjct: 162 KKKQLIYQEGNRPTSLYFIQKGRVKTYKVNNDGKELAVNLYSAGEFLGYVALLEGSNYHE 221 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRA 144 + C +P + TLI N+ A ++ + + ++ QL+ H +Y +R Sbjct: 222 NAEALEACELTAIPREDFETLINNNR--EVAQQFIRLLAKNITEKEQQLL-HLAYSSLRK 278 Query: 145 TLLSMIDWNEELRSRIGVMNYIHQ--RTRIS-------RSVVAEVLAALRKGGYIEMNKG 195 + + + ++ + + R ++ S++ L R +E+ +G Sbjct: 279 KVAEALLFLKKKYHHVTDQPFSIDISRENLATIAGTATESMI-RTLGDFRDEKLLEIKQG 337 Query: 196 KLVAIN 201 + +N Sbjct: 338 VITILN 343 >UniRef50_Q4Q279 Putative uncharacterized protein n=3 Tax=Leishmania RepID=Q4Q279_LEIMA Length = 801 Score = 46.9 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 10/105 (9%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRREENVL--------IGITQAPYIMGLADGLMKND 81 E I E +V+ G + + + L IG AP + G+ D +++N Sbjct: 105 EMDAIIEEGAYLEHIYVLASGTVEVMNSKKGLKRAFGHRRIGSMVAPSVFGIDDAILENA 164 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRIL 126 + + + N T +P KQ + L ++ ++ A + R L Sbjct: 165 VEFTYHASSNTTLLLIPRKQFMDLFARSPIF--ANNVSSQILRTL 207 >UniRef50_Q124D1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Polaromonas sp. JS666 RepID=Q124D1_POLSJ Length = 219 Score = 46.9 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 19/193 (9%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPY 84 +K V+ + + FV+L+G + + + + G A G L Sbjct: 32 PKKAVVINEAEIGDSLFVLLKGSVKVFSMDESGREITFGRIHAGDYFG-EMSLDGGPRSA 90 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQ-IR 143 +I+ CT + + + A + R RD N + Sbjct: 91 SVITVEPCTCAVVNRTEVGEHLASAP--EFALNLVMRVIRR--ARDATEAARNMALLDVY 146 Query: 144 ATLLSMIDWNEELRSRIGVM---------NYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 L+++++ + L + I R SR +V+ +L L KGGYIEM Sbjct: 147 GRLIAVLEKQDGLTTSTTAAGVTLEAITHQEIASRVGASREMVSRLLKDLEKGGYIEMET 206 Query: 195 GKLVAINRLPSEY 207 ++ + +LP + Sbjct: 207 KRITLLKKLPLRW 219 >UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TI91_HELMI Length = 235 Score = 46.9 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 17/184 (9%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIPY 84 +Q + + + + EG + L + ++ I I G PY Sbjct: 40 KRRQPLLQEGEPADAVYFLHEGKVRLAKMNPDGQEKVLSIVDPGDIFGEIVAFDPGPSPY 99 Query: 85 KLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + LP K+ L+ + L A + R L +++ ++ Sbjct: 100 TAETMEPARVSRLPLKEFRQLVSDHPSLAAACLQVEARRLRQAYRHMKNLALLDTHGRVA 159 Query: 144 ATLLSMIDW---NEELRSRIGVMNYIHQRTRI------SRSVVAEVLAALRKGGYIEMNK 194 A L + + +RI ++ R + SR V+ +LA + +E+ + Sbjct: 160 ARLFKLAHDYGVPDSRGTRI---DFNLTRQELAQIVGTSRETVSRILAEYERLKILEVER 216 Query: 195 GKLV 198 ++V Sbjct: 217 QQIV 220 >UniRef50_A9BSL8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BSL8_DELAS Length = 245 Score = 46.9 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 9/127 (7%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPYK 85 Q + ++D + V+ G + + + ++ + A I+GLA L Y Sbjct: 47 RHQQVRAADPKRREVLVVASGCVEVGGVDATGSRFVLSMHSAGDIVGLARLLEHTQFVYD 106 Query: 86 LISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRA 144 + +P + + L++ + LW+D + + L + + +++ I Sbjct: 107 YHAHQPTVLVEIPGESFLALLDAHPPLWKDICLLVLARMHEL----IVVQQRHAFSNIDN 162 Query: 145 TLLSMID 151 + ++ Sbjct: 163 RVAELLA 169 >UniRef50_A1WYA2 Cyclic nucleotide-binding protein n=2 Tax=Ectothiorhodospiraceae RepID=A1WYA2_HALHL Length = 640 Score = 46.5 bits (109), Expect = 6e-04, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAP-YI 70 +L + L G + + D + + +++ EG + LR + + + P + Sbjct: 34 EQLLRALLARGRVHHLESGDVLFHLGDPDRDTLYILYEGRVELR--DAHNVVTVREPVTL 91 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELR 129 +GL+ + +P + TL ++ L +A + R + Sbjct: 92 LGLSSYFDDEPYTLTARATRPSLVVGIPFEDVRTLEREHPPLADALSRIIADRIRANSWQ 151 >UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHX8_THEYD Length = 222 Score = 46.5 bits (109), Expect = 6e-04, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 72/184 (39%), Gaps = 17/184 (9%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPY 84 +++ IF+ + V+++G I + + N +++ + AP G L P Sbjct: 29 KKRETIFNEGDIPQWFHVLIKGKIKISKFSNNGKEIILELLDAPDFFGTLALLKNIPYPA 88 Query: 85 KLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 I+ +C ++P+K + ++ + +L + + + + + + + +I Sbjct: 89 SAIAIDDCDIGNIPSKTFLQIVNKYPELQSEILHHVTMRLKSGIESLKNIALVDVLSRIV 148 Query: 144 ATLLSMIDWNEELRSRIG---------VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 +L + + + ++ I + + + +++ L+K GYI Sbjct: 149 YQILKLAN---KYGKKVSEGILIDLKLTKQEIAEMSGTTTETAIRIMSKLKKEGYITEQN 205 Query: 195 GKLV 198 K++ Sbjct: 206 RKII 209 >UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus RepID=A9WEN3_CHLAA Length = 239 Score = 46.2 bits (108), Expect = 7e-04, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 17/196 (8%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR--EENVLIGIT--QAPYIMGLADGLM 78 + V FS + E F++ EG + + R + ++ I G L Sbjct: 39 APMQRVPAGTVFFSPEQRAEVLFILKEGRVRIYRLSTDGKMLTTAILNEGTIFGEMALLG 98 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNS 138 + + + C + + L+ + R A + + L + +L Sbjct: 99 QQLHQHYAEALTPCLLCLMSREDVKRLLLSDP--RIATRIVEILGQRLISAEQRLSDFAF 156 Query: 139 YEQ---IRATLLSMID--WNEELRSRIGVMNYIHQRTRIS------RSVVAEVLAALRKG 187 I LL M R ++ R ++L LR Sbjct: 157 KSLPQRIATLLLQMAQPAKPRLFRPGSSQREVALTHEALAEMLGTYRETTTKILNDLRTQ 216 Query: 188 GYIEMNKGKLVAINRL 203 G IE+ +G++V ++ + Sbjct: 217 GLIELRRGRIVLLDEI 232 >UniRef50_Q9K5F3 Crp/Fnr family protein n=2 Tax=Bacillus licheniformis RepID=Q9K5F3_BACLI Length = 225 Score = 46.2 bits (108), Expect = 8e-04, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 73/187 (39%), Gaps = 13/187 (6%) Query: 32 QVIFSSDVNNEDTFVILEGVISLRREE---NVLIGITQAPY-IMGLADGLMKNDIPYKLI 87 Q++F D E +++L+G I L + ++ P+ + Y Sbjct: 40 QILFMEDDPRERMYLLLDGFIKLEKSNEAGSMFYTDYVRPHTLFPFGGLFRDEHYHYAAE 99 Query: 88 SEGNCTGYHLPAKQTITLI-EQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATL 146 + + Y++P L+ + L D L+ + E R ++ ++++++ + Sbjct: 100 ALTDIELYYIPMNIFEDLVRDNKNLLYDILNHLSDILALHEERLKRITLSHAHDRVTQAI 159 Query: 147 LSMIDWNEELRSRIGVMN------YIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAI 200 + + + S V+N I + + SR V+ VL LR G I K + I Sbjct: 160 YYLTESLGQKESNSTVINCPITAAEIAKISGTSRETVSAVLKKLRCEGVISQMN-KQIMI 218 Query: 201 NRLPSEY 207 NR P + Sbjct: 219 NR-PEYF 224 >UniRef50_A4IT53 Putative uncharacterized protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4IT53_GEOTN Length = 211 Score = 45.8 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 84/196 (42%), Gaps = 16/196 (8%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIM 71 + YG R +F + VI++ ++ + + +G++ + + L+ I +M Sbjct: 12 ESFLHYGKR-QFVKSRTVIYNQGSIDDGFYYLHKGLVKIVTTTPKGRDRLLNIVVPGQLM 70 Query: 72 GLADGLMKNDIPYK-LISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRI---LE 127 G+ +M I + I+ N YH +Q L+ + + D + + Sbjct: 71 GI--QIMDGQIHFTTAIAVRNSVIYHFSREQFAKLLME---YPDILTLMIQTLNQKMQIL 125 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 LR + + +S EQI LL++ D + + + + + T ++R V ++L ++ Sbjct: 126 LRTINMKAFSSEEQIAFLLLNICDEFKNHEAPLTQQD-LAHCTGLTRITVYKILKKWKEE 184 Query: 188 GYIEMNKGKLVAINRL 203 G IE+ K + I RL Sbjct: 185 GIIEIQNRKFL-IKRL 199 >UniRef50_B1XXN2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXN2_LEPCP Length = 237 Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 15/203 (7%) Query: 17 CLSRYGTRFEFNNEKQ--VIFSSDVNNEDTFVILEGVI-SLRREENV--LIGITQAP--Y 69 L R E ++ ++ + +++L G + + + +N + P Y Sbjct: 38 ALRALAERAEPRRYRKGVLLIQEGDQGDTLYIVLSGRVRAFSQGDNEREITYGVYGPGEY 97 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQ--NQLWRDAFYWLAWQNRILE 127 + ++ + C +P + + I Q + + + R Sbjct: 98 VGEISLDGGPRSASVITVEPTACVV--IPRQTLLLHIAQYPEFAFELLAKVIR-RARAAT 154 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG---VMNYIHQRTRISRSVVAEVLAAL 184 L QL ++ Y ++RA L S+ + + ++G + R SR +V+ ++ L Sbjct: 155 LSAKQLALNDVYGRLRALLESLAEAQPDGTRQVGERLTHQDMANRLGCSREMVSRLMKDL 214 Query: 185 RKGGYIEMNKGKLVAINRLPSEY 207 +GGY+ +N LV LP+ + Sbjct: 215 EEGGYVAVNGHTLVLPRALPARW 237 >UniRef50_Q1ASB9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASB9_RUBXD Length = 250 Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 73/204 (35%), Gaps = 19/204 (9%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE------ENVLIGIT 65 + L+ E + + + + + EG + L R + ++G+ Sbjct: 41 EGFFQALALAAEVLEIGAGTPL-YREGEPSGAVYFVREGRVKLFRSFSGRKPRDQILGVL 99 Query: 66 QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITL---IEQNQLWRDAFYWLAWQ 122 ++GL L + + +C Y + + + L LA + Sbjct: 100 GDGAVLGLDAALEGRPQSHGATALTDCALYAVFRDDLTGIMCRFPEASL--RLSRALASR 157 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVM------NYIHQRTRISRSV 176 R LE L+ H++ +++ LL + + + V + + T ISR Sbjct: 158 IRELEDLVSDLVFHSAPQRVARMLLRLATEEGRVTKQGVVFEPSLSRQEMAEATGISREA 217 Query: 177 VAEVLAALRKGGYIEMNKGKLVAI 200 ++ L+ L + G +++ G+ + I Sbjct: 218 LSRALSRLAQEGILDLE-GRTITI 240 >UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCU2_9BURK Length = 238 Score = 45.0 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 15/181 (8%) Query: 32 QVIFSSDVNNEDTFVILEGVISL--RREENV-----LIGITQAPYIMGLADGLMKNDIPY 84 + +F D + ++ G I + E ++ + P G + + Sbjct: 45 EKLFLRDAAPCGLYAVVRGTIRISGHSGEGDGAREAVLVLLSPPQWFGEISVFDGSARTH 104 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRI-LELRDVQLIGHNSYEQI 142 + CT H+P ++ + + Q+ WRD +A + R+ + Q + Sbjct: 105 DAHAAEPCTLLHIPHEELLAWLTQHPAHWRDLAVLMADKLRLAFVSMEEQTVLPAPQRLA 164 Query: 143 RATLLSMIDW------NEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 R L + + + LR + + +SR ++L + G + + +G Sbjct: 165 RRLLTMALSYGQATESDRTLRVLVVTQEQLALMIGVSRQTTNQILRDFKARGVLHVQRGC 224 Query: 197 L 197 + Sbjct: 225 I 225 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 45.0 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 67/179 (37%), Gaps = 11/179 (6%) Query: 33 VIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIPYKLIS 88 VIF F I +G++ + + +I + + ++G L + P + Sbjct: 45 VIFKEGAVPSGIFYIQKGMVKKYKVDRDGREQIIHVASSGELIGYHAILAEERYPDSAST 104 Query: 89 EGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLL 147 C+ +P + + ++ + L + L+ + +L + + E++ TL+ Sbjct: 105 IEACSIAFIPKEDFLEVLGSSSILSQRLLKNLSHEFAVLTNNMSAMTQRTAREKVAITLI 164 Query: 148 SMIDWNEELRSRIGVMNYIHQR-----TRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 + + + + + I + I++ + +L + ++ G+ + IN Sbjct: 165 VLREKYKSMEDNENGIINISRSDLSNMAGIAKENLVRILKEFKNNNILQTE-GRKITIN 222 >UniRef50_C0ZDT8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDT8_BREBN Length = 215 Score = 45.0 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 11/183 (6%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGL 73 L YGTR +F K I+ ++ E + + +G++ + + ++ L+ I IMGL Sbjct: 14 LLEYGTR-QFVKGKTAIYKQEMIGEGFYYLHKGLVKIVTSTFKGKDRLVNIVVPGQIMGL 72 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQL 133 L + I+ N YH Q + +++ F Q + L + + Sbjct: 73 -QTLDQQPHFTTAIAVKNAVVYHFSCLQFLEMLKARPELLSLFTQTINQKMRILLAAINM 131 Query: 134 IGHNSYEQIRATLLSMIDWNEELRSRIG--VMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 S EQI LL++ E+ ++ + + ++R V ++L A ++ G IE Sbjct: 132 KALTSEEQIARLLLNIC---EDFKNHEVPLTQQELAECAGLTRITVYKILKAWKEQGIIE 188 Query: 192 MNK 194 + Sbjct: 189 IKN 191 >UniRef50_Q1IRK0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRK0_ACIBL Length = 239 Score = 44.6 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 13/175 (7%) Query: 33 VIFSSDVNNEDTFVILEGVI--SLRREEN--VLIGITQAPYIMGLADGLMKNDIPYKLIS 88 V+F FV+ +G + S+ + +++ I + ++GL+ + + Sbjct: 49 VLFVEGQAPRGIFVLCKGRVKLSICSTDGKTLILKIAEPGEVLGLSATVSGKTYELTAET 108 Query: 89 EGNCTGYHLPAKQTITLIEQN--QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATL 146 C + + + ++++ +R A N + H++ E++ L Sbjct: 109 IDPCQVNFVKREDFLRFLKEHADACFRVAEQLSEKYNTACREIRSLGLSHSAAEKLAKLL 168 Query: 147 LSMIDWNEELRSRIGVMNY------IHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 L E + I Q SR V + A L+K I +++G Sbjct: 169 LEWSARAGESNKSEPRVRLALTHEEIAQMIGTSRETVTRLFAELKK-RQIVLSRG 222 >UniRef50_C2KXC0 Possible cNMP-binding regulatory protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KXC0_9FIRM Length = 309 Score = 44.6 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 76/207 (36%), Gaps = 26/207 (12%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGI 64 + L C+ Y ++ +++ + N + V+L+G I + + + L+ Sbjct: 109 ENLNALLYCMKSYVRSYKKG---EIVHLEEKNEQHVGVVLQGSIHMLKTDVWGNETLLTY 165 Query: 65 TQAPYIMGLADGLMKNDIPY-KLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 I G G Y ++ + ++ I + + + F + Sbjct: 166 MNEGEIFGETFGNNTAAGEYVSFVAASKAEVLFISFQKAIHVCKNRCAFH--FRLIENLF 223 Query: 124 RILELRDVQL---IGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIH---QRTRIS---- 173 ++ +++QL I S +R +L+ + + + YI RT ++ Sbjct: 224 DLIGKKNIQLMEKIEVTSRSSLREKILAYLSLQAQKQKS----KYIELGLSRTDMAQFLC 279 Query: 174 --RSVVAEVLAALRKGGYIEMNKGKLV 198 RS + L+ L++ G I+ ++ + Sbjct: 280 TNRSAMTRELSQLKEEGIIDFDRNTFI 306 >UniRef50_C9PYN1 CRP family transcription regulator n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PYN1_9BACT Length = 226 Score = 44.2 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 67/204 (32%), Gaps = 48/204 (23%) Query: 23 TRFEFNNEKQVIFSSDVNNE--DTFVILEGVISLRREENV----LIGITQAPYIMGLADG 76 TRF F ++ + +E +L G + +R + + I AP+I+ + Sbjct: 31 TRFNFAQKEVGETIVNAGDECAHLSFLLSGQMEVRSQADDNSYIFIEEIGAPFILQPENL 90 Query: 77 L-MKNDIPYKLISEGNCTGYHLPAKQTITLIE-----QNQL---------------WRDA 115 + +++ C+ L + + L + + L WR Sbjct: 91 FGISPRYTRTFVAKTTCSLLLLSKSEVLRLADDFIIFKFNLLNTISTQAQKAARLPWRHC 150 Query: 116 FYWLAWQN-RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISR 174 + L + R + G + ++ + + + + R I Sbjct: 151 YNGLEHRIARFFTSHCIHPAGP---KLVQIKMEKLANEMNDSRLNIS------------- 194 Query: 175 SVVAEVLAALRKGGYIEMNKGKLV 198 VL ++ G IE+ +G+++ Sbjct: 195 ----RVLNHMQTQGLIELKRGRVI 214 >UniRef50_C3XI85 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=C3XI85_9HELI Length = 190 Score = 44.2 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 58/192 (30%), Gaps = 12/192 (6%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL------IGI 64 KL + + G + + N +++F +++L G + L + + + + Sbjct: 1 MQKLFNIVEQMGNKRTYQNG-EILFLQGAMPTHLYLLLSGKVRLYKTKEHISSTQLTLHT 59 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNR 124 +P + M++ P C + + T N + Sbjct: 60 LSSPQFIAEMPFFMQSPYPANAECASICEIITISQESFHTHCLGNS---EICLLFITSLC 116 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAAL 184 I + L + + L +I I+ ++ L AL Sbjct: 117 KKIQILESHIALQNQSLQEKVLSYLSHNKDSL--HTLTQRHIANALNIAPESLSRTLKAL 174 Query: 185 RKGGYIEMNKGK 196 + G + +KGK Sbjct: 175 KTQGILTTHKGK 186 >UniRef50_D0DBE2 Putative transcriptional regulator Crp/Fnr family protein n=1 Tax=Citreicella sp. SE45 RepID=D0DBE2_9RHOB Length = 235 Score = 43.8 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 21/198 (10%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE---NVLIGITQAPY-IM 71 T N+E ++ + ++I G + + + N + P I+ Sbjct: 25 AAFLDACTLRFCNSETPLLTQHEP-TTGCYLIARGRVVITYLDGDGNESMVHVAGPGEIV 83 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDV 131 G + L + + + T + P + +Q + R+ L + +RD+ Sbjct: 84 GEVEALSGSLCVASCTTMPDTTVLNCPVSVLMEYAQQPSVLRNLARILHERL----IRDL 139 Query: 132 QLIGHNSYEQIRATLLSMI-----DWNEELRSRIGVMNYIHQRTRI--SRSVVAEVLAAL 184 + ++ + A L + + + E+R T + SR V +L L Sbjct: 140 ENRSVEQFQTVEARLNNYLCVFSTADDPEIRVSQT-----QLATLLACSRQKVNRMLKDL 194 Query: 185 RKGGYIEMNKGKLVAINR 202 R G I++++G++ ++R Sbjct: 195 RDAGVIDLSRGRIRVLDR 212 >UniRef50_A5FCJ9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ9_FLAJ1 Length = 211 Score = 43.8 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 9/189 (4%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVI--SLRREE--NVLIGITQAPYIMGL 73 L +G + + VIF + + ILEG + S E+ ++ IGI G Sbjct: 21 LYTWGAVAKKVPKHAVIFFENDPPLSYYQILEGTVKMSYTNEDGKDLTIGIFNEGNSFGE 80 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQ 132 ++ P ++ +C L +L+E+N ++ AW+ + Sbjct: 81 PPLFIEQPYPASAEAQTDCVILKLSKTNFFSLLEENPEIQSRVLKLFAWKIYNKIVFSKN 140 Query: 133 LIGHNSYEQIRATLLSMI---DWNEELRSRIG-VMNYIHQRTRISRSVVAEVLAALRKGG 188 +I H +I+ L ++ + + +I I T + V ++ + K Sbjct: 141 IINHKPEYRIQYFLDNLKRQHNSKPSQKMKIPYTRQEIADFTGLRVETVIRTISLMNKNK 200 Query: 189 YIEMNKGKL 197 IE+ KL Sbjct: 201 KIEIIDHKL 209 >UniRef50_C3RK73 CRP/FNR family transcriptional regulator n=3 Tax=Bacteria RepID=C3RK73_9MOLU Length = 203 Score = 43.5 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 72/196 (36%), Gaps = 11/196 (5%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQA 67 L GT ++ +I+ + ++ + ++IL+G + + + + I Sbjct: 5 ENLFNYFKNTGTLIKYQPND-IIYMQEDSSNNLYLILKGRVRVYLISKDGQEITLDIIDK 63 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTI-TLIEQNQLWRDAFYWLAWQNRIL 126 I G + L+ P + + + ++E +L L+ N L Sbjct: 64 GRIFGESSFLLNTSRPVCVSAIDEVKLISCNLENLYPAILESKELTIAIMQLLSSTNDHL 123 Query: 127 ELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 + + +N +E+I A LL I T ++R V ++L + Sbjct: 124 TNQVKKAYFYNRHEKIAAFLLEQKKKTISY-----THEEIASLTGLNRVTVTKILNDFYQ 178 Query: 187 GGYIEMNKGKLVAINR 202 G+I++ K++ ++ Sbjct: 179 KGWIDLAYRKIIIVDH 194 >UniRef50_Q6MK23 Transcription regulator containing cAMP-binding domain n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK23_BDEBA Length = 214 Score = 43.5 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 69/180 (38%), Gaps = 9/180 (5%) Query: 33 VIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPYKLIS 88 ++F + ++ F+I +G + + + +++G+ A G L ++ + Sbjct: 37 LLFEQEDESKGLFLITKGTVKISKISPNGKEIVLGLLGAGKTFGEGSLLGQDRQADTAAT 96 Query: 89 EGNCTGYHLPAKQTITLIEQNQL--WRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATL 146 ++LP K+ ++++N L + W L + ++ E++ + L Sbjct: 97 TEPTEVFYLPKKELQNILQKNPLLYQSVVASLVRWMAN-LNNVIENINTPSAKERVWSYL 155 Query: 147 LSMIDWNEELRSRIGVMNY-IHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPS 205 + + ++ + + + + LA L G I+MN K + I + P Sbjct: 156 CRLQSEQNKPLLQLSGKKHEVALMLGLRPETFSRALAELENEGQIKMNH-KQIQILQSPK 214 >UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ03_9PROT Length = 241 Score = 43.1 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 11/171 (6%) Query: 41 NEDTFVILEGVISLRREENV---LIGITQAPY-IMGLADGLMKNDIPYKLISEGNCTGYH 96 + +V++ G + + +I P G + + +++ C Sbjct: 56 TDSLYVLISGGAKVLNSDEEGREVILTLLGPGEFFGEMGLIDGSPRSADVVATETCELLV 115 Query: 97 LPAKQTIT-LIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEE 155 + L E L + L + R + L + Y ++ L+ +E Sbjct: 116 ITKNDFKRCLAENFDLCLNIMKSLVQRLREADRNIESLALLDVYGRVAKLLIDF-SEDER 174 Query: 156 ----LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 +R R+ + I + SR +V+ V+ L GY + +G++V I + Sbjct: 175 GQRVIRRRLTKQD-IAKMIGASREMVSRVMKDLENRGYFRVEEGRIVIIEK 224 >UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SN7_RHOFD Length = 233 Score = 43.1 bits (100), Expect = 0.007, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 73/209 (34%), Gaps = 23/209 (11%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQA 67 L + L Q +F+ + + +L GV+ + + ++ + ++ Sbjct: 26 QALREALLVNAEIRTIAAG-QRLFARGDAPDGIYCVLTGVVRVTGITENGQEAILAMLES 84 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNR-- 124 P G + +E + + + ++ + WR L + R Sbjct: 85 PQWFGEIALFDNEPRTHDAWAESDAKLLRVSQRALEKMLSERPDDWRHFGRLLTQKLRSV 144 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMI----DWNEELRSRIGVMNYIHQRTRI----SRSV 176 + + D+ L+ + R LLSM W + I + ++ + SR Sbjct: 145 FVAMEDIFLLPPTARLARR--LLSMAKGYGAWTDHTSRVISIS---QEQLGLMLSLSRQT 199 Query: 177 VAEVLAALRKGGYIEMNKG--KLVAINRL 203 V + L L G I ++G ++V + +L Sbjct: 200 VNQSLRELEDAGSIHRHRGSIEMVDLRKL 228 >UniRef50_A5VDU1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VDU1_SPHWW Length = 205 Score = 42.7 bits (99), Expect = 0.008, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 18/168 (10%) Query: 43 DTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLP 98 + ++++EG + LRR+ ++ +Q I+G Y +++ G H+P Sbjct: 25 ELWMVMEGALELRRDAYTGARSVLSFSQPGEILGFNSQFSDAVPTYNVMTYGFTKLLHIP 84 Query: 99 AKQTITLIEQNQLWRDAFYWLAWQNRILELR-DVQLIGHNS--YEQIRATLLSM------ 149 ++ + + ++ L+LR D + + E+I LL M Sbjct: 85 GSTMRDVLREQP--ELVWTVASYYFTRLQLRTDYIALHATAPLKERIILQLLQMARQTAN 142 Query: 150 IDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 + LR + ++ SR + L L+ G I+ GK+ Sbjct: 143 MTDEIHLRLSQESLAFLLGT---SRQSINRELKTLKDLGLIDYKGGKI 187 >UniRef50_A4V7K8 Putative cyclic amp receptor-family protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7K8_PSEFS Length = 215 Score = 42.3 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 81/201 (40%), Gaps = 25/201 (12%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPY-----IMG 72 + G R +F ++ D + F++ EG +++ ++ + + + G Sbjct: 18 FTASGKRQKFARGSTLM-RFDSDEPCVFLLTEGTAAIQVTDHSQVSELNIAHLIPGDVFG 76 Query: 73 LADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQ 132 + N I ++++ C Y L AK+ + L A + L + +R ++ Sbjct: 77 SIEPGEGNKIEMYVLAKSECFAYVLTAKELLQACASQPL---AMFGLCRELSRTSVRSLR 133 Query: 133 LIGHNSYEQIR----ATLLSMIDWNEELRSRIGVMNYIHQRTRI--------SRSVVAEV 180 +G ++ +R + L+ + + G Y+ + TR+ +R +V +V Sbjct: 134 KVGQFAFYDVRGRVSSALVELCSLPGAISHPEG---YVLKNTRVEIASMVGCTREMVGKV 190 Query: 181 LAALRKGGYIEMNKGKLVAIN 201 + L + G I + +G+ ++ Sbjct: 191 MKELSEEGLISI-RGRQTLVH 210 >UniRef50_A4VU00 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=11 Tax=Streptococcus RepID=A4VU00_STRSY Length = 232 Score = 42.3 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 78/203 (38%), Gaps = 17/203 (8%) Query: 10 EFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGIT 65 F +L K + RF + Q+ F ++ + FV+ +G + + + + Sbjct: 24 SFDQLAKHI-----RFRKIPKGQIFFYAEDPRDYLFVLYKGYARIEQYDETDSFTYLDYI 78 Query: 66 QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNR 124 + D Y I+ + + +P TL + N L+ R Sbjct: 79 RQGGAFPFGDMFQDKPYHYTAIAITDLEYFIVPMVLFETLSKINPSQMAYICQKLSKVLR 138 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNY---IHQRTRIS---RSVVA 178 ELR + + +++ L +++ W+ R + + + I + +R++ R V+ Sbjct: 139 FQELRLRNAMRSKASDRVVQAL-ALLYWDMCQREQFATLPFEIHIQEISRLAATTRETVS 197 Query: 179 EVLAALRKGGYIEMNKGKLVAIN 201 VL L++ G I + +L ++ Sbjct: 198 HVLKQLKQDGKIAYSHKQLTYLD 220 >UniRef50_B9K9E7 Transcriptional regulator, Crp/Fnr family n=7 Tax=Thermotogaceae RepID=B9K9E7_THENN Length = 207 Score = 41.9 bits (97), Expect = 0.012, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 81/199 (40%), Gaps = 9/199 (4%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPY 69 L K L ++G F E +++ +D V+LEG + + I + Sbjct: 8 LLKNLLQHGQVLTF-REGEMVRYQGDPIDDILVLLEGSLRTEHVSENGKVLEIDTIRPVQ 66 Query: 70 IMGLADGLMKND-IPYKLISEGNCTGYHLPAKQTITLI-EQNQLWRDAFYWLAWQNRILE 127 I+ ++ P +I++ + +P ++ + L+ + L ++ RI+ Sbjct: 67 IVASGLVFSRDPVYPVNVIAKEDSKILSIPKEKFLDLLMKDRNLLLFFLEDVSEHFRIVS 126 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 + L E++ L+ ++ + EL + V + + +R ++ V L + Sbjct: 127 EKLFFLTTKTLKEKVIHYLVHHMNEDGELVLPVSVEE-LSRIFGCARPALSRVFQDLERE 185 Query: 188 GYIEMNKGKLVAINRLPSE 206 G+IE KG+ + + R P E Sbjct: 186 GFIE-KKGRRIRVLRNPLE 203 >UniRef50_C6XJC0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJC0_HIRBI Length = 234 Score = 41.5 bits (96), Expect = 0.016, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 14/208 (6%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAP 68 E K K +S F+ V + + E L N L+ I Sbjct: 19 AELTKHMKVISFAAGERIFDTGATAPNIYQVQSGYVKLFAE----LEDGTNTLLAIYVPG 74 Query: 69 YIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-----LWRDAFYWLAWQN 123 I G + + + I+ + T H+P + Q L + Y L++ Sbjct: 75 NIFGETPVICGRPLNHTTIAATDVTLNHIPKVDFESCFNQYGEVSRILCKKLAYILSYAI 134 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRI---SRSVVAEV 180 + + + I ++ + I + I + + +R V + Sbjct: 135 HFKKAKALYPISTQVPLVLKNLVECSGTKRIGTSQEIDIPITIEEISNFLGVTRQTVQKE 194 Query: 181 LAALRKGGYIEMNKG--KLVAINRLPSE 206 + L+ G I N G K+V +L ++ Sbjct: 195 ITTLKSEGIISKNLGFWKIVDFPKLAAK 222 >UniRef50_A6B7X3 Cyclic nucleotide binding protein/2 CBS domains (Fragment) n=2 Tax=Vibrio harveyi group RepID=A6B7X3_VIBPA Length = 217 Score = 41.5 bits (96), Expect = 0.018, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 39/113 (34%), Gaps = 5/113 (4%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQ 66 P + K+ + + + + I + +D FV+ GV+ + R + L Sbjct: 22 PEETLTKVTESVE-----ISYYRQDTPIIHFGDHIQDLFVVRSGVVEVYRRKGELYNRLD 76 Query: 67 APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 + G L N + + + + + Y +P + + + + D Sbjct: 77 EGDLFGQMGLLTNNKVRFPVKAIEDTLLYCIPVEVFQDIYDNFDSFADFVEVE 129 >UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=Leptospira interrogans RepID=Q72SA0_LEPIC Length = 231 Score = 41.5 bits (96), Expect = 0.019, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 66/186 (35%), Gaps = 7/186 (3%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLM 78 +F + +++ + I G + + R + I +A +G D L Sbjct: 34 KKFRLFRKNELLIQEGTKTNGFYFIKSGCVRIFRNSSSGKEQTFSIRRAGEWVGFRDLLA 93 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHN 137 + + N ++ + L+E++ + +A + + LE + + L Sbjct: 94 GKTFVQNIEAIENVEACYISKEVLNELMEEDSNFQMEILKQMATEWKQLEDQTLTLGTKQ 153 Query: 138 SYEQIRATLLSM-IDWNEELRSRIGVMNYIH-QRTRISRSVVAEVLAALRKGGYIEMNKG 195 + +I L+S ++ + + I S + L+ + +I++ K Sbjct: 154 VHSKIAELLISFRTTSPDKSEIELNLTREIMASMVGTSTETLVRALSDFKHRKWIKIRKN 213 Query: 196 KLVAIN 201 ++ +N Sbjct: 214 RICFLN 219 >UniRef50_A3JBW7 Transcriptional Regulator, Crp/Fnr family protein n=4 Tax=Marinobacter RepID=A3JBW7_9ALTE Length = 265 Score = 41.5 bits (96), Expect = 0.020, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 69/210 (32%), Gaps = 18/210 (8%) Query: 2 LSVVKPLQEFGKL----DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR- 56 L++++ F L + L + R Q+++ D+ F +L G + L R Sbjct: 45 LALLRSHAMFSALAEDDLQELLHHARRLRLG-HHQLLYRQDMPAHHFFFVLSGRLRLYRL 103 Query: 57 ----EENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLW 112 + L I I + + +P K L++ N + Sbjct: 104 DASGIDRTLDSIAPGDCIAEVMIYADPARYACYAEALKTSEVLMIPVKAYQDLLDTNHSY 163 Query: 113 RDAFYWLAWQNRILELRD---VQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMN---YI 166 A L R + ++ +++ L+ ++ E + + + Sbjct: 164 TQAA--LRHYAMRAVTRFHDLEIMTVQSARDRLIRYLVDLLPEGSEQGGEVELPLPKCLV 221 Query: 167 HQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 R + + +LA L+ G + +N+ + Sbjct: 222 ASRLAMQPETFSRILADLKSNGLVRVNRSR 251 >UniRef50_A5VAR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VAR3_SPHWW Length = 228 Score = 41.1 bits (95), Expect = 0.021, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 71/178 (39%), Gaps = 11/178 (6%) Query: 32 QVIFSSDVNNEDTFVILEGVI--SLRREEN-VLIGITQAPY-IMGLADGLMKNDIPYKLI 87 ++I+S + F ++EG + S+ R + L+ + P G++ + +P Sbjct: 37 ELIYSQGDQGGEMFRVVEGSVRLSVTRTDGRELLYLLFEPGDCFGVSTLIDGEPLPQTAE 96 Query: 88 SEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAW-QNRILELRDVQLIGHNSYEQIRATL 146 + + + L ++++ + DA LA R+L + ++ + + Sbjct: 97 AGRDLELQIVTKAAFDELRQRHRTFDDALIRLATRHMRLLSGLFADASLQDMSARVASRI 156 Query: 147 LSMIDW-----NEELRSRIGVMNY-IHQRTRISRSVVAEVLAALRKGGYIEMNKGKLV 198 LS+ ++ + I + + +R V +V+ R+ G + + G+LV Sbjct: 157 LSVARSFGRPGDDGIELSIALSQTELAAMVGGARQTVNKVIMQFRRDGLLSIRNGRLV 214 >UniRef50_Q23JK5 Cation channel family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23JK5_TETTH Length = 1619 Score = 41.1 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 45/122 (36%), Gaps = 10/122 (8%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLR-------REENVLIGITQAPYIMGLADGL 77 N + +I + ++ + I G+I + +N+++ +T + G Sbjct: 907 ILVNPNEVIINEDESDDSSIYFIQSGIIEIYLQQIQKKNGKNIIVTLTSGQ-VFGEISFF 965 Query: 78 MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHN 137 S T Y + ++ I ++++N D + Q++I+ +D + Sbjct: 966 SGLQRQASARSVNLSTLYKIKREEFIEILKENT--EDFERFKMMQDQIIFQKDTSITRSE 1023 Query: 138 SY 139 Y Sbjct: 1024 CY 1025 >UniRef50_A7HRB7 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRB7_PARL1 Length = 234 Score = 41.1 bits (95), Expect = 0.023, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 26/177 (14%) Query: 34 IFSSDVNNE--DTFVILEGVI----SLRREENVLIGITQAPYIMGLADGLMKNDIPYKLI 87 + D +E + +L G + +L ENV I I+ I G A ++ + Sbjct: 44 HWIYDAGDEARGLYGVLSGSVTTYVALDNGENVPINISGPSSIFGYAAQVLGGHRVTTAV 103 Query: 88 SEGNCTGYHLPAKQTITLIEQN--QLWRDAFYW----LAWQNRILELRDVQ------LIG 135 + +P + + I ++ LW L W ++L R Sbjct: 104 AHERSEIIFIP-QHALAAIARDLPSLWLHFAELATEQLTWAMKVLAERSRLPPPAQVASR 162 Query: 136 HNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEM 192 +Y + +R + + + T +SR V +L L + G + + Sbjct: 163 LQAYAAVWDNEDGTATLP--IRQ-----DELAEMTGLSRKTVNLILKDLERRGVVAL 212 >UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidetes RepID=C6XZK0_PEDHD Length = 352 Score = 41.1 bits (95), Expect = 0.023, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 74/192 (38%), Gaps = 15/192 (7%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVIS-LRREEN---VLIGITQAPYIMGLADGLM 78 + +KQVI+ + +++L G + ++ E+ +L G+ A G+ L Sbjct: 158 RKVRNVKKKQVIYYEGDAVQGIYLVLTGKVKTIKLSEDGRELLTGLYNAEEYFGIPALLG 217 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFY-WLAWQNRILELRDVQLIGHN 137 + + T LP + L+ + + D ++ + L ++ QL+ Sbjct: 218 HEPYAETAEALEDTTVCLLPKEMVEALLNK---YPDVAKEFIRILSNNLRSKEEQLLQL- 273 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRI------SRSVVAEVLAALRKGGYIE 191 +Y +R + ++ + V+N R + + V+ +L+ R G IE Sbjct: 274 AYHSVRKRMAEVLIRLCKQEKSGAVLNLKISRDNLAAMAGMATETVSRILSDFRDEGLIE 333 Query: 192 MNKGKLVAINRL 203 +++ + L Sbjct: 334 KKGSQIIVTDEL 345 >UniRef50_UPI0001C42484 Crp/Fnr family transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42484 Length = 233 Score = 41.1 bits (95), Expect = 0.025, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 12/167 (7%) Query: 34 IFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIPYKLISE 89 IF D E+ + I G I + + +N ++ I + + K P Sbjct: 43 IFMQDEPIENVYFIYRGRIKIYKADNRGREQIVAILREGEMFPHVGFFRKGGYPAYAQVV 102 Query: 90 GNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLS 148 + +P ++ +N +L F+ L + L+ R I +N+YEQI ++ Sbjct: 103 DHAQLVVIPIGNFEDILRKNPELCIQVFHVLGEKIVDLQDRLEAQIVNNTYEQIIKLIIR 162 Query: 149 MID---WNEELRSRIGVMNY----IHQRTRISRSVVAEVLAALRKGG 188 + + E + + +Y + + +R V L LRK G Sbjct: 163 LGETNGEPAEDGTTVIKSDYTNQQLAKMIGTTRETVNRTLTKLRKEG 209 >UniRef50_A1STJ2 Nucleotidyltransferase n=96 Tax=Proteobacteria RepID=A1STJ2_PSYIN Length = 641 Score = 41.1 bits (95), Expect = 0.025, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 5/101 (4%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQ 66 P Q K+ + + + +I + + ++I GV+ L R + L Sbjct: 38 PEQVIVKVAQSVE-----ISYYRADSMIIDFNDKIHELYIIRSGVVELYRRKGELYNRLD 92 Query: 67 APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIE 107 + G L N + + + + Y +P L E Sbjct: 93 QGQLFGQMGLLTNNKVRFPAKAVKDTLLYVIPESVFNELCE 133 >UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SML3_THIDA Length = 225 Score = 40.8 bits (94), Expect = 0.027, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 10/187 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYI 70 + + + + + +F F +L G++ L R E ++ + + + Sbjct: 25 FDQVLAHASVRKLAPN-ECLFDQGDPCTHFFFVLSGIVKLCRVAPSGEEKVMDLVRPGHY 83 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLI-EQNQLWRDAFYWLAWQNRILELR 129 A M P + L + + L+ L ++ + L Sbjct: 84 FAEAVMFMGGRYPVYARALDGTRLVALDNRHFLGLLGSNRDLCMRLLSTMSQRIHSLINE 143 Query: 130 DVQLIGHN-SYEQIRATLLSM--IDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 L H+ + I L + D +R R+ + I R I ++ VLA LR Sbjct: 144 IDHLTLHSGAQRVIGYLLEQLPDGDAPGSVRLRVP-KHVIASRLGIQPETLSRVLAKLRT 202 Query: 187 GGYIEMN 193 G I+++ Sbjct: 203 GHLIDVH 209 >UniRef50_A0E1L2 Chromosome undetermined scaffold_73, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0E1L2_PARTE Length = 864 Score = 40.8 bits (94), Expect = 0.028, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 46/137 (33%), Gaps = 3/137 (2%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISE 89 + Q I D + ++I +G + + E V + G +N + Sbjct: 575 QNQNICVQDEIGTEFYIIRKGTVKIHSENPVFVKYLHYGDYFGEGCFFNQNKRRANATAM 634 Query: 90 GNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRI-LELRDVQLIGHNSYEQIRATLLS 148 C L + + + +++ + +++ + ++ SY++I L Sbjct: 635 NQCDLITLSKADFLRVFQHDEVMQKLENLQVVRSQTQIMDKNKFFSQLTSYQKI--QLEM 692 Query: 149 MIDWNEELRSRIGVMNY 165 +++ + + Y Sbjct: 693 LLNQKRVFQKHSMIQQY 709 >UniRef50_B0UG76 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UG76_METS4 Length = 221 Score = 40.8 bits (94), Expect = 0.031, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 60/205 (29%), Gaps = 14/205 (6%) Query: 7 PLQE--FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVI-SLRREEN---- 59 PL + + + + + + D I+EGV+ ++R +N Sbjct: 16 PLHHTDIPRTSALIQPHSRGSLIPRGRALFWEGDTQAHKIE-IVEGVVRAVRLFDNGNRQ 74 Query: 60 VLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 +L +M + + + NC E+ + + L Sbjct: 75 ILAFFWSGDVVM----PSQADCQHFTAEAVTNCRVRLSAVSNICQSGERCGVHQVLAETL 130 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 + ++I + + IR L R I + I S V Sbjct: 131 SLVSQI-SQKSGMARITSFLLTIRKHLPRDPKLPSAQRLLISRAD-IADHVGTSLETVCR 188 Query: 180 VLAALRKGGYIEMNKGKLVAINRLP 204 LA L+ I+M K + LP Sbjct: 189 TLAELKARNLIDMPNRKTIRFLDLP 213 >UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 Tax=Rhodobacterales RepID=Q1GF83_SILST Length = 222 Score = 40.8 bits (94), Expect = 0.032, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 61/192 (31%), Gaps = 9/192 (4%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQA 67 +L L T V+F + + I+ G + + + + + + Sbjct: 17 ERLRAMLDSQATDVHLETGD-VLFERGDEGDALYAIISGALEISTLSAAGRKLSLDMMRP 75 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILE 127 I G + + L + + + ++ A L + + Sbjct: 76 GAIFGEIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHP--ELAGDMLKLAGQRMR 133 Query: 128 LRDVQLIGHNSYEQ-IRATLLSMIDWNEELRSRIGVMNY-IHQRTRISRSVVAEVLAALR 185 + QL +R + + ++ + + + +R V++ L+ R Sbjct: 134 WMNTQLNEQVFLPMPVRLARKLLYLTPADGNGQLSLSQSELAEFVGATREAVSKTLSNWR 193 Query: 186 KGGYIEMNKGKL 197 K G IE+++G L Sbjct: 194 KAGLIEISRGGL 205 >UniRef50_Q2BPU0 Transcriptional regulator, Crp-Fnr family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPU0_9GAMM Length = 218 Score = 40.8 bits (94), Expect = 0.033, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 67/195 (34%), Gaps = 12/195 (6%) Query: 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQ---AP---YIMGLAD 75 ++ ++ F++ +G + + T P + + Sbjct: 24 ASQLLRVKRHEIAVRKGKQVSGAFIVTQGSLRVFSYMPNGSESTFYHIRPGETCVFAINC 83 Query: 76 GLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFY-WLAWQNRILELRDVQLI 134 + P ++++ + Y + L ++ +D L+ L Q+ Sbjct: 84 LFNRLLYPAWVMADEDTDVYIVKGGDFKELFKKESSIQDLTISALSSAVFKLMTEVEQIQ 143 Query: 135 GHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 G +++ LL+ D + I R +R V+A ++A L G+I + Sbjct: 144 GWTLSQRVINLLLNHADDQAWV---YMTQQDIAGRLGTTREVIARIVADLSAKGWIATGR 200 Query: 195 GK--LVAINRLPSEY 207 G+ L+ N+L ++ Sbjct: 201 GRVQLLDTNKLSQQF 215 >UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9N7_CLOTS Length = 225 Score = 40.8 bits (94), Expect = 0.033, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 59/158 (37%), Gaps = 8/158 (5%) Query: 33 VIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPYKLIS 88 +I + ++ ++I +G I + + ++ I + G + + + Sbjct: 38 IIINEGDRIDNIYIIHKGKIKVYKINLDGKEQILYILKDGDTFGENSIFKEQKATFYAEA 97 Query: 89 EGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLS 148 + L + + +I +N A + + L+ + + + E ++ LLS Sbjct: 98 MDDVKLCLLSKEDFMGIISRNP--EIALKIMNYLLERLQNIESLVKDITT-EDVKTRLLS 154 Query: 149 MIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 MI + I + I + +SR +A +L R+ Sbjct: 155 MI-LKLADKEGIKSSDGIKLKLYLSREDIANLLGTTRE 191 >UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGI3_CHIPD Length = 248 Score = 40.4 bits (93), Expect = 0.036, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 66/171 (38%), Gaps = 11/171 (6%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPY 84 + Q+IF + + I EG + +++ +I + A ++G L N P Sbjct: 54 RKGQIIFRENNPAFGIYYIKEGKVKKYKQDRNGNEHIIYVANAGELIGYHAILADNTYPD 113 Query: 85 KLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + +C +P + IE + L R L+ + +L + H++ E++ Sbjct: 114 SAAALEDCMIAFIPRDAFLLAIESSANLSRHLLGALSHEYNVLSNSLSIVARHSAKERLA 173 Query: 144 ATLLSMIDWNEELRSRIG-VMNYIHQR-----TRISRSVVAEVLAALRKGG 188 +L+ + + + G + I ++ T + V +L L+K Sbjct: 174 ISLIVLREKYKSSEYDTGDICITISRKDLASMTATTEENVVRMLKELKKDN 224 >UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTE5_DYAFD Length = 354 Score = 40.4 bits (93), Expect = 0.036, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 65/204 (31%), Gaps = 23/204 (11%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----- 59 +K Q F + K + + +K+ I++ F + +G + + Sbjct: 142 IKEAQAFDPIVKLAED--KKVKILRKKETIYTEGSFPSHVFFLQKGKVKAYKSNENGKEY 199 Query: 60 --VLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFY 117 L+ + G D L I+ +P L++ N+ A Sbjct: 200 ITDLLKEGE---FFGYLDLLHGAPYEETAIALEKSEVAMIPKDDFFNLLQGNR--EVASK 254 Query: 118 WLAWQNRILELRDVQLIGHNSYEQIRA-------TLLSMIDWNEELRSRIGVMNY-IHQR 169 ++ + ++ R+ +L+ +Y +R L+ + + V I Sbjct: 255 FIRMLSNEIKEREERLLQL-AYNSVRKRVAQALVMLVQRYQEDRSKPFSMAVTREDIASM 313 Query: 170 TRISRSVVAEVLAALRKGGYIEMN 193 + V L+ ++ ++M Sbjct: 314 VGTATETVIRTLSDFKEERLVDMK 337 >UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax=Finegoldia magna RepID=B0S3H2_FINM2 Length = 501 Score = 40.4 bits (93), Expect = 0.039, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 15/193 (7%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMK 79 +F + +F + E+ +VI +G I + ++ + +G + L Sbjct: 303 KFLKLKAEDYLFKPGDSAENMYVIHKGTIKVFHNTIDGREQILYLYHENDFVGGHNILED 362 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA---WQNRILELRDVQLIGH 136 Y + +C +P + + L L + R+ E +L Sbjct: 363 VKYIYMGQALTDCEVIMIPRDIFNKYLINSPL--ALTKILKKSFERIRLAEDLVQRLSTS 420 Query: 137 NSYEQIRATLLSM-----IDWNEELRSRIGVMNY-IHQRTRISRSVVAEVLAALRKGGYI 190 N+ + A LL + ++ + +R + + + + ++R + L +K GYI Sbjct: 421 NATMKTAALLLRLKDTMGVETKDGIRLDLAMNREELGNYSGLTRETITRKLGEFKKLGYI 480 Query: 191 EMNKGKLVAINRL 203 ++ K++ I + Sbjct: 481 DLIGTKVIVIKNV 493 >UniRef50_A4ASV9 Cyclic nucleotide-binding domain (CNMP-BD) protein n=2 Tax=Flavobacteriales RepID=A4ASV9_9FLAO Length = 636 Score = 40.4 bits (93), Expect = 0.040, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 3/96 (3%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNN---EDTFVILEGVISLRREENVLIGITQAPYIMGLA 74 L + ++ F + N + +V+ +G I L RE+NVL+ I GL Sbjct: 27 LMTICSNVRIGYHEKDTFVFEKNGLLHDSFYVVKDGAIGLYREDNVLVDECDEGDIFGLR 86 Query: 75 DGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ 110 + K++ + Y + ++ LI N Sbjct: 87 ALISKSEYRLSAKAIEESIIYSISSELLEELIATNG 122 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 40.4 bits (93), Expect = 0.041, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 65/181 (35%), Gaps = 11/181 (6%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKNDIPY 84 + Q+++ F I GV+ + + + ++ + + +G + L + + Sbjct: 23 RKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILHLAKEGDFLGYSALLGEENYSN 82 Query: 85 KLISEGNCTGYHLPAKQTI-TLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + + +P + + TL ++ L+ + I+E + + E++ Sbjct: 83 SAMIVEDAKICFIPKETFLATLFNNTPFFKRITKALSHELGIMEEKLTDATQKSIRERLA 142 Query: 144 ATLLSMIDWNEELRSRIGVMNYIHQRTRIS------RSVVAEVLAALRKGGYIEMNKGKL 197 +L + ++ + R I+ V +L+ +K IE+ ++ Sbjct: 143 FVILQLASSYGVDGGETQKIDLVLSREEIAGMVGTATESVIRLLSEFKKDNLIELEGKRI 202 Query: 198 V 198 + Sbjct: 203 I 203 >UniRef50_A8LSQ5 Transcriptional regulator n=19 Tax=Alphaproteobacteria RepID=A8LSQ5_DINSH Length = 225 Score = 40.4 bits (93), Expect = 0.044, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 82/210 (39%), Gaps = 22/210 (10%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN------ 59 K L + G++ IF+ ++ ++L+G + ++++ Sbjct: 10 KGLSRLPADIQAELEDGSQIVSVPAGTQIFAPGQTADNLLLLLDGTVKVQQKSETGREVF 69 Query: 60 VLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 + ++ A L D + +E +P K L+ ++ ++R+ F + Sbjct: 70 LYRVHAGESCVLTTACMLAFEDYSAEGTAETAVKAVAIPRKMFDDLVAKSPVFRE-FVFT 128 Query: 120 AW---QNRILELRDVQLIGHNSYEQIR--ATLLSMIDWNEELRSRIGVMNYIHQRTRI-- 172 A+ + L D + +R + LL + D RS + + T + Sbjct: 129 AYSRRITDLFTLIDDIVFQR---MDVRLASRLLELAD-----RSDVVHATHAVLGTELGT 180 Query: 173 SRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 +R V++ L+ ++ G+IE ++G++ + R Sbjct: 181 AREVISRTLSEFQRRGWIEQSRGEVRIVGR 210 >UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK24_BDEBA Length = 233 Score = 40.0 bits (92), Expect = 0.045, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 58/181 (32%), Gaps = 9/181 (4%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYIMGLADGLMK 79 RF+ Q+IF S + F I G++ L + + +G Sbjct: 45 RFKAG---QIIFYSGNDPLGIFTIQSGLVKLEVISASGAAHTLRLVGPGGTLGYRSMFAN 101 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSY 139 ++ +C +P + + + + A L+ ++ L + + + + Sbjct: 102 EPYHASAVAVEDCELCFVPKAEIMNIFKSYP--ELAMKLLSHISKDLRMAEEKWMDQMDK 159 Query: 140 EQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVA 199 ++I + + I Q + V L+ K G I+ G+ + Sbjct: 160 GASERIAEALIFLQDHFAHQNWTRREIAQWAGTTPETVIRTLSQFEKDGLIDQTDGRSIR 219 Query: 200 I 200 I Sbjct: 220 I 220 >UniRef50_UPI0001C360D6 transcriptional regulator, Crp/Fnr family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C360D6 Length = 245 Score = 40.0 bits (92), Expect = 0.048, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 76/204 (37%), Gaps = 22/204 (10%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPY 69 LD+ L+ T + ++ +D + ++++G R ++ AP+ Sbjct: 31 LDRFLNPCITMRMVKKGEDIVRPTD-KLQSIILVVKGGAHFTRVSTDGNTNMLAAVNAPF 89 Query: 70 IMGLADGLMKNDIPYK-LISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILEL 128 +G+ + + Y +I+ NC ++ + I ++ +A + + Sbjct: 90 FIGITQLVSNDKEYYSQIIAAKNCLLLYIDCSYFLKGIREDG---EAALIVIRDLAKVVE 146 Query: 129 RDVQLIGHNSYEQIRATLLSM----IDWNEELRSRIGVMNYIHQRTR-----ISRS--VV 177 R+ + + + L++ + +E R + I +R +S S + Sbjct: 147 RNHTRMDRMVFLKASNNLMAYIESKWNESEICRRDRQLT--IRERHGVIAADLSVSVRTL 204 Query: 178 AEVLAALRKGGYIEMNKGKLVAIN 201 + +L+ G + + KG + +N Sbjct: 205 YRSINSLKDEGLLTVQKGGALMVN 228 >UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11W09_CYTH3 Length = 355 Score = 40.0 bits (92), Expect = 0.050, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 76/213 (35%), Gaps = 34/213 (15%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGI 64 QE KL R +RF+ KQ+++S + I+ G + + + ++ G+ Sbjct: 148 QELEKLISD-QRKISRFKK---KQILYSEGNKANSLYFIVSGKLKTYKTNDDGRELITGL 203 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAF-YWLAWQN 123 + +G + L +D + + + +P + ++ + +D ++ + Sbjct: 204 YKEGDFLGYMNLLEGSDHTESAMMLDDSEIHIIPKDEFFAVLFSS---KDVSEKFIKMLS 260 Query: 124 RILELRDVQLIGHNSYEQIRATLLS---------MIDWNEE------LRSRIGVMNYIHQ 168 L ++ +L+ +Y +R + D + R + + Sbjct: 261 DNLIEKEERLLKL-AYNSVRKRVAESLFMIYSNFHKDEDPSDFTMAIYRDDLAAIA---- 315 Query: 169 RTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 S+ V L+ + G I + K+ IN Sbjct: 316 --GASKETVIRTLSDFKDEGLISIQGSKISIIN 346 >UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Sphingomonadaceae RepID=Q2G6R8_NOVAD Length = 229 Score = 40.0 bits (92), Expect = 0.055, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 69/193 (35%), Gaps = 14/193 (7%) Query: 21 YGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYIMGLADG 76 G F ++++ + F++L G+ + +++ +A +++G Sbjct: 30 RGQVRTFKPGQELMAQGEEGKT-LFIVLSGLARVSMVAANGREIILDYAEAGHVLGEIAF 88 Query: 77 LMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGH 136 L + + + L +I++++ + L R L + + Sbjct: 89 LDGGERTASVEAIEPVEALVLTRSAFAEIIDRHK--GLSLRLLKAMARRLRQNNAVIEAD 146 Query: 137 NSYE----QIRATLLSMIDWNEELRSRIGVMNY---IHQRTRISRSVVAEVLAALRKGGY 189 +Y R L M+ + +++ + + +SR + L+A + G Sbjct: 147 RAYTSGPRLARFLLRLMMGEGSDAGAQLKIALSQGELGNFAGMSREQINRQLSAWAENGI 206 Query: 190 IEMNKGKLVAINR 202 + + G++ ++R Sbjct: 207 VALKGGRVTILDR 219 >UniRef50_A6EU35 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EU35_9BACT Length = 198 Score = 39.6 bits (91), Expect = 0.069, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 10/177 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIG-ITQAPYIMG-LADGLMKNDI 82 E ++ Q+I ++ + + F I +G + + N ++ + + I G LA Sbjct: 13 MENIDKGQIIELNNEHKDSIFFIKKGSVKIVNTSNDIVKYVVKRGNIFGELALYDKHAAT 72 Query: 83 PYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQ 141 + + ++ +Q L+E++ L + + LE R L+ +S + Sbjct: 73 EEVAYTLEDSVICYIKTEQMENLMEKHKSLKNGLLKIYGIRIKKLERRLNDLLYKDSATR 132 Query: 142 IRATLLSMIDWNEEL-------RSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 I+ + + E+ + I T SR V+ VL+ +RK I+ Sbjct: 133 IKEFIADYLQEFGEVDTNGTLKAKNLLSHKDIANLTNTSRQTVSNVLSKMRKEKLIK 189 >UniRef50_UPI0001C368B1 CRP/FNR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B1 Length = 226 Score = 39.6 bits (91), Expect = 0.070, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 85/216 (39%), Gaps = 35/216 (16%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR--EENVLIGITQAPY--IM 71 + RYG R E E + + +++ + ++EG+ SL + P+ ++ Sbjct: 8 QYFERYGMRIEVKRETSIC-NPRLSDSYIYYLVEGIASLTSLTMDGEEKDFIYFPHDHLL 66 Query: 72 GLADGLM-------------------KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLW 112 G A LM + IP+ + ++ +C Y L + TL+E++ + Sbjct: 67 GFAPALMRHYRKVRGEDYTLSGDDCVQEKIPFGIDTKTDCVFYRLDERTFETLLEEDACF 126 Query: 113 RDAFYWL-----AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNY-- 165 Y + + + + D Q S + L + + R+ Y Sbjct: 127 --LSYIMEAVTCNYVTLVRKFHDTQEECA-SKRLYKWFL-AFSSREGQYRAVPHGFTYAE 182 Query: 166 IHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 I + + V+++ +AL+K G I+ KG+++ I+ Sbjct: 183 IAKYLGMHPVTVSKLSSALKKSGIIKKEKGRILIID 218 >UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A710_NATTJ Length = 243 Score = 39.6 bits (91), Expect = 0.071, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 65/179 (36%), Gaps = 12/179 (6%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPY 84 VIF E + + +G + + +++ ++ I + I P Sbjct: 49 PGGSVIFYHGDPGEAMYYVKDGKVKIVKDDFDGREQILHIMKPGDIFAEVVVFDDGPYPA 108 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + + ++ + ++ + + + R + + L ++Y++ Sbjct: 109 TAEVMEDTVVGVITKERLENHLHEHPTIAIKIMKLMGKRLRKAQSKVADLALRDTYQRTI 168 Query: 144 ATLLSMIDWNE----ELRSRIGVMNYIHQRTRI---SRSVVAEVLAALRKGGYIEMNKG 195 + ++++ ++ + I + + + SR V VL+ L+K G I+ +KG Sbjct: 169 NIIYNLMEEDDCAFCSEKQEIAITATHQELASMAGTSRETVTRVLSTLKKEGIIKTDKG 227 >UniRef50_P73234 Sll1924 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73234_SYNY3 Length = 241 Score = 39.2 bits (90), Expect = 0.079, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 73/192 (38%), Gaps = 15/192 (7%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRR---EENVLIGITQAP-YIMGLADGLMKN 80 F Q I + + I EG I + I P I+G + ++ Sbjct: 38 FRNYPCSQSILFDNYYGGSIYFIAEGWIKVCAIGESSKNSIYTIYGPDEIVGAIAAVEED 97 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSY 139 P + ++ + +P + + L+ ++ Q + + + R L + +L +S Sbjct: 98 WNPKEAVTLTPAKIWSIPTQDFLNLLREDPQAGIQVAIFASKRLRRL-NQYFRLRESDSV 156 Query: 140 EQIRATLLSMIDWNEEL----RSRIGVMNYIHQRT----RISRSVVAEVLAALRKGGYIE 191 ++ LL ++ ++ + R+ + N H+ T ++R V L L K G I Sbjct: 157 TKVAHILLELVGHGKKTISTKKHRVLIPNLPHRETAMLSGVTRETVTRTLGKLEKKGLI- 215 Query: 192 MNKGKLVAINRL 203 + +G + I L Sbjct: 216 LRQGATIEILNL 227 >UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Tax=Persephonella marina EX-H1 RepID=C0QS01_PERMH Length = 223 Score = 39.2 bits (90), Expect = 0.080, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 16/178 (8%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVI--SLRREENVLIGITQAPYIMG 72 + + Y +++ K++++ + + D F+ILEG I S+ +E + I I G Sbjct: 23 FRHIIPYMKIYQYQKGKEIVYQGE-ESSDLFIILEGRIKASIFDDEGNELVID----IFG 77 Query: 73 LADGLMKNDI------PYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRI 125 D + + + LI+E + L K I ++++ +L L ++ R Sbjct: 78 EGDFVGELSLIDGKPRSASLIAETDVVVAVLERKYFIEILKKYPELCLKLAENLVYRLRK 137 Query: 126 LELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNY--IHQRTRISRSVVAEVL 181 + L + E+I + N+E ++ M++ I +R SR V + L Sbjct: 138 ADKFLESLAFLDVKERIINLFIESAVENDERVYKVPKMSHREIAKRIGASRESVTKAL 195 >UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Peptococcaceae RepID=B8G1C8_DESHD Length = 223 Score = 39.2 bits (90), Expect = 0.082, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 6/100 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAP-Y 69 + + GT + Q+IFS + + + EG + + R V +G ++P Sbjct: 17 VGHIVQSGTIVRYKKG-QIIFSESDAADRVYFVKEGYVRIFRITQYGRRVTVGCIRSPGQ 75 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN 109 +MGLA+ L D + + T + +Q + L+E++ Sbjct: 76 LMGLAETLYGGDRTCFASAIDDVTIVVIRHQQFLDLLEKH 115 >UniRef50_A4B9Q8 CBS domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Q8_9GAMM Length = 620 Score = 39.2 bits (90), Expect = 0.083, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 10/127 (7%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTF-VILEGVISLRREENVLIGIT 65 P E +L LS E+ E+ V + ++ G + E++ LI Sbjct: 26 PEPELLRLAGHLS-----IEYIPER---SRQPVTLDHAIALVRSGGFDIVDEQDALIDRL 77 Query: 66 QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNR 124 G++ L Y++++ + + LP + L++++ L + ++++ Sbjct: 78 GEGECFGISSMLQSRPSTYRVVAIEDSLIFRLPGPVFLELLDEHKSLRQFFEKLVSYRAS 137 Query: 125 ILELRDV 131 + Sbjct: 138 PIAEHSR 144 >UniRef50_B7IVS0 Transcriptional regulator, Crp family n=49 Tax=Bacillales RepID=B7IVS0_BACC2 Length = 229 Score = 39.2 bits (90), Expect = 0.087, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 68/182 (37%), Gaps = 12/182 (6%) Query: 32 QVIFSSDVNNEDTFVILEGVISLRR--EENVLI--GITQAPYIMGLADGLMKNDIPYKLI 87 Q +F + E + +L+G + L R + L+ + I Y Sbjct: 40 QFLFLEGDSRERIYFMLDGFVKLERVNQNGNLLYDDYVKRYSIFPYGGMFTDRGYNYTAE 99 Query: 88 SEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILELRDVQLIGHNSYEQIRATL 146 + + Y++P +++ ++ L+ ++ E R + N+ +++ TL Sbjct: 100 AMTDVEVYYIPTVIFEDMVKSSRTQLMYVVQQLSSILKLNENRVQNITIPNAQDRVIQTL 159 Query: 147 LSMID-WNEELRSRIGV-----MNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAI 200 ++ E+ +I + I + + SR V+ VL L+ + + K + I Sbjct: 160 NYLMQDLGEQSGEKIVISCPLTTIEISKISGTSRETVSSVLKQLKNDSIVTILDKK-ITI 218 Query: 201 NR 202 + Sbjct: 219 HN 220 >UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Tax=Actinomycetales RepID=A4X9W3_SALTO Length = 230 Score = 39.2 bits (90), Expect = 0.098, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKNDIPY 84 + Q++F + E V+ G +++ R E ++ + + P ++G L + Sbjct: 39 RKGQLLFVENDPGESLIVLRRGAVAVFRTAPTGERAVLSVIRPPEVLGEVSLLDASTRSA 98 Query: 85 KLISEGNCTGYHLPAKQTITLIEQN 109 + +C L + L+ N Sbjct: 99 SAEAIEDCAALALSRGAFMELVHSN 123 >UniRef50_C2HBY4 Crp family transcriptional regulator n=12 Tax=Enterococcus faecium RepID=C2HBY4_ENTFC Length = 233 Score = 39.2 bits (90), Expect = 0.098, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 70/181 (38%), Gaps = 16/181 (8%) Query: 32 QVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPYKLI 87 Q++F + + +++ +G++ L R + + ++ + Y Sbjct: 43 QILFDDGDSRQRLYILTKGLVRLERYDESATYYYYDYVTTNNLFPMSGMFGEETYTYTAQ 102 Query: 88 SEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQL---IGHNSYEQIRA 144 + + ++LP L +N Y + ++++E+ ++++ + +++++++ Sbjct: 103 AMTDIETFYLPVSYYEKLARKNP--EQLIYMIQKISKVVEIHELRIQIGLTSSAFDRVKQ 160 Query: 145 TLLSMIDW--NEELRSRIGVMNYIHQR-----TRISRSVVAEVLAALRKGGYIEMNKGKL 197 L + + I + I + + +R +V+ LR G ++ +K Sbjct: 161 NLFILKEELGVPTEDGHITIPYPITLKELAVNSGTTRETAGQVIKQLRDSGLLDYHKKHF 220 Query: 198 V 198 Sbjct: 221 T 221 >UniRef50_C0ZKM2 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZKM2_BREBN Length = 235 Score = 39.2 bits (90), Expect = 0.099, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 74/192 (38%), Gaps = 17/192 (8%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLA 74 CL + R F V+F + F+I G I L + N G + G Sbjct: 17 VNCLETFSVRKNFVPG-AVLFLDGERADQLFLISSGQIKLTKNTND--GKELTLQVFGAG 73 Query: 75 DGLMKNDIPYKLISEGNC-------TGYHLPAKQTIT-LIEQNQLWRDAFYWLAWQNRIL 126 + + + + + ++ + + +P + LI+ Q D W+ NR + Sbjct: 74 ELVGVSGLFEQELTYTSTGTMLMEGEVWIIPRQGLEKMLIKNGQFCVDFLRWMGLMNRRM 133 Query: 127 ELRDVQLIGHNSYEQIRATLLSMID-----WNEELRSRIGVMNY-IHQRTRISRSVVAEV 180 + + L+ + + +TL+ M + + + + + N + Q ++R V + Sbjct: 134 QSKFRDLLLNGKIGALYSTLIRMSNTYGKPHPDGILIDLSLTNRDLAQFIGLTRESVNRM 193 Query: 181 LAALRKGGYIEM 192 L+ L+K I++ Sbjct: 194 LSDLKKQDSIDL 205 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAP6 Uncharacterized protein yaiV n=77 Tax=Enterobact... 218 1e-55 UniRef50_C9XX32 Putative uncharacterized protein n=2 Tax=Cronoba... 209 4e-53 UniRef50_UPI00017F30F5 putative DNA-binding transcriptional regu... 205 8e-52 UniRef50_B5BLI5 Putative uncharacterized protein n=34 Tax=Salmon... 203 4e-51 UniRef50_A8AFU1 Putative uncharacterized protein n=2 Tax=Citroba... 190 2e-47 UniRef50_B5XXF4 Cyclic nucleotide-binding domain protein n=4 Tax... 190 4e-47 UniRef50_B5XXF5 Putative uncharacterized protein n=3 Tax=Enterob... 189 5e-47 UniRef50_UPI00019F1C16 hypothetical protein CATC2_07750 n=2 Tax=... 188 1e-46 UniRef50_UPI0001C342D9 hypothetical protein CATC2_07960 n=1 Tax=... 184 1e-45 UniRef50_B5BAM2 Putative transcriptional regulator protein n=33 ... 183 3e-45 UniRef50_UPI00019F1389 hypothetical protein CATC2_03035 n=1 Tax=... 180 4e-44 UniRef50_B5XTC2 Putative uncharacterized protein n=5 Tax=Klebsie... 179 5e-44 UniRef50_A4W7R9 Putative inner membrane protein n=1 Tax=Enteroba... 178 1e-43 UniRef50_A4WED3 Putative uncharacterized protein n=1 Tax=Enterob... 176 3e-43 UniRef50_A4WAX2 Putative uncharacterized protein n=1 Tax=Enterob... 175 9e-43 UniRef50_A8GI54 Putative transcriptional regulator, Crp/Fnr fami... 171 1e-41 UniRef50_C1M4J5 CRP/FNR family transcriptional regulator n=6 Tax... 171 1e-41 UniRef50_UPI00019F10BE putative transcriptional regulator protei... 170 4e-41 UniRef50_A7MEB9 Putative uncharacterized protein n=2 Tax=Cronoba... 170 4e-41 UniRef50_A7MR68 Putative uncharacterized protein n=2 Tax=Cronoba... 169 7e-41 UniRef50_A4WAX1 Putative uncharacterized protein n=1 Tax=Enterob... 166 3e-40 UniRef50_A8AFU0 Putative uncharacterized protein n=2 Tax=Citroba... 165 8e-40 UniRef50_A8AIP5 Putative uncharacterized protein n=3 Tax=Enterob... 163 2e-39 UniRef50_UPI00019F17B7 hypothetical protein CATC2_24059 n=1 Tax=... 163 3e-39 UniRef50_UPI00019F1602 hypothetical protein CATC2_05660 n=1 Tax=... 158 1e-37 UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator a... 154 2e-36 UniRef50_C9XZ73 Putative uncharacterized protein n=2 Tax=Cronoba... 151 2e-35 UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n... 142 6e-33 UniRef50_B9Z4U0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 138 1e-31 UniRef50_C1DB51 cAMP-binding protein-catabolite gene activator a... 137 2e-31 UniRef50_B1XXN2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 134 2e-30 UniRef50_C4X4Z2 Putative uncharacterized protein n=4 Tax=Klebsie... 133 3e-30 UniRef50_C6L0Y1 Crp/Fnr family transcriptional regulator n=1 Tax... 131 1e-29 UniRef50_Q124D1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 129 6e-29 UniRef50_UPI0001C33F28 CRP/FNR family transcriptional regulator ... 129 7e-29 UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr fami... 127 2e-28 UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putat... 125 1e-27 UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protei... 124 1e-27 UniRef50_C1MAT1 Predicted protein n=2 Tax=Citrobacter RepID=C1MA... 123 4e-27 UniRef50_C4XB37 Putative uncharacterized protein n=2 Tax=Klebsie... 123 5e-27 UniRef50_Q1ASB9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 122 7e-27 UniRef50_A2RDI8 Crp family regulatory protein n=26 Tax=Streptoco... 121 1e-26 UniRef50_C0ZDT8 Transcriptional regulator n=1 Tax=Brevibacillus ... 120 3e-26 UniRef50_B1G1H4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 118 9e-26 UniRef50_A4IT53 Putative uncharacterized protein n=1 Tax=Geobaci... 116 4e-25 UniRef50_Q9K5F3 Crp/Fnr family protein n=2 Tax=Bacillus lichenif... 116 5e-25 UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Ther... 115 7e-25 UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curviba... 114 1e-24 UniRef50_D2TRD7 Putative uncharacterized protein n=1 Tax=Citroba... 114 2e-24 UniRef50_C6DJ46 Putative uncharacterized protein n=1 Tax=Pectoba... 112 6e-24 UniRef50_C4KZ85 Transcriptional regulator, Crp/Fnr family n=1 Ta... 109 5e-23 UniRef50_Q1IRK0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 109 7e-23 UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 108 1e-22 UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus R... 107 2e-22 UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicob... 107 2e-22 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 106 4e-22 UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter fo... 102 7e-21 UniRef50_A9BSL8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 84 3e-15 UniRef50_A1WYA2 Cyclic nucleotide-binding protein n=2 Tax=Ectoth... 82 9e-15 Sequences not found previously or not previously below threshold: UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Ta... 119 6e-26 UniRef50_B3PG67 Cyclic AMP receptor protein n=2 Tax=Gammaproteob... 116 5e-25 UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Ta... 114 2e-24 UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 111 1e-23 UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein... 109 6e-23 UniRef50_A9BMG5 Transcriptional regulator, Crp/Fnr family n=7 Ta... 106 4e-22 UniRef50_Q07HN5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 105 9e-22 UniRef50_Q67K68 Putative cyclic nucleotide-binding transcription... 103 4e-21 UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Ta... 102 7e-21 UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 102 7e-21 UniRef50_O05689 Catabolite gene activator n=9 Tax=Gammaproteobac... 102 1e-20 UniRef50_Q15QG5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 101 1e-20 UniRef50_Q3K5V6 Cyclic AMP receptor protein,catabolite gene acti... 101 2e-20 UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Pro... 99 5e-20 UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 100 6e-20 UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidete... 99 9e-20 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 98 1e-19 UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Ac... 98 1e-19 UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89... 98 2e-19 UniRef50_B7IVS0 Transcriptional regulator, Crp family n=49 Tax=B... 98 2e-19 UniRef50_P0A2T7 Catabolite gene activator n=270 Tax=Gammaproteob... 98 3e-19 UniRef50_C9Y9B1 Putative uncharacterized protein n=1 Tax=Curviba... 97 3e-19 UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 97 4e-19 UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 97 4e-19 UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 96 5e-19 UniRef50_P29281 Catabolite gene activator n=65 Tax=Gammaproteoba... 96 5e-19 UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator a... 96 6e-19 UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=L... 96 6e-19 UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes ... 96 7e-19 UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Ta... 96 8e-19 UniRef50_B0VAJ9 Cyclic AMP receptor protein n=11 Tax=Gammaproteo... 96 8e-19 UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 96 1e-18 UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator ... 95 1e-18 UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr fami... 95 1e-18 UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 95 1e-18 UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 T... 95 2e-18 UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospir... 95 2e-18 UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 T... 95 2e-18 UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 95 2e-18 UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr fami... 95 2e-18 UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Ta... 95 2e-18 UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Ta... 94 2e-18 UniRef50_A0NV10 Cyclic nucleotide-binding:Bacterial regulatory p... 94 2e-18 UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 94 3e-18 UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=B... 94 3e-18 UniRef50_A4EN16 Transcriptional regulator, Crp/Fnr family protei... 94 3e-18 UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 93 4e-18 UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Ta... 93 5e-18 UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Ta... 93 5e-18 UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Ta... 93 5e-18 UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Ta... 93 5e-18 UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory p... 93 6e-18 UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 93 7e-18 UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 93 7e-18 UniRef50_A8U5T9 Transcriptional regulator, Crp family protein n=... 93 7e-18 UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 92 9e-18 UniRef50_UPI0001C42484 Crp/Fnr family transcriptional regulator ... 92 9e-18 UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 92 1e-17 UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator a... 92 1e-17 UniRef50_Q6MK23 Transcription regulator containing cAMP-binding ... 92 1e-17 UniRef50_UPI00017889C0 transcriptional regulator, Crp/Fnr family... 91 2e-17 UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Ta... 91 2e-17 UniRef50_C3XI85 Putative uncharacterized protein n=2 Tax=Helicob... 91 2e-17 UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 91 2e-17 UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 91 2e-17 UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gem... 91 2e-17 UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Ta... 91 2e-17 UniRef50_A7NG37 Transcriptional regulator, Crp/Fnr family n=2 Ta... 91 2e-17 UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdell... 91 3e-17 UniRef50_Q0A6E9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 91 3e-17 UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides s... 91 3e-17 UniRef50_B8FWH5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 91 3e-17 UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Ta... 90 3e-17 UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family... 90 4e-17 UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 90 4e-17 UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 90 4e-17 UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio p... 90 4e-17 UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr fami... 90 4e-17 UniRef50_A5ER25 Putative Cyclic-AMP receptor-like protein n=1 Ta... 90 5e-17 UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C... 90 5e-17 UniRef50_Q125U4 Transcriptional regulator, Crp/Fnr family n=7 Ta... 90 5e-17 UniRef50_A5FCJ9 Putative transcriptional regulator, Crp/Fnr fami... 90 6e-17 UniRef50_C6PP44 Transcriptional regulator, Crp/Fnr family n=1 Ta... 90 6e-17 UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Micro... 90 6e-17 UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 90 7e-17 UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 90 7e-17 UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 89 7e-17 UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 ... 89 8e-17 UniRef50_UPI0001850701 cAMP-binding domain-containing protein n=... 89 8e-17 UniRef50_B8ID71 Transcriptional regulator, Crp/Fnr family n=11 T... 89 8e-17 UniRef50_A8UU26 cAMP-dependent transcriptional regulator n=1 Tax... 89 9e-17 UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Ta... 89 1e-16 UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Ta... 89 1e-16 UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr fami... 89 1e-16 UniRef50_B8G2Z1 Transcriptional regulator, Crp/Fnr family n=3 Ta... 89 1e-16 UniRef50_B1MBG6 Putative transcriptional regulator n=1 Tax=Mycob... 88 1e-16 UniRef50_A1B7P5 Putative transcriptional regulator, Crp/Fnr fami... 88 1e-16 UniRef50_Q0K2Z3 Transcriptional regulator, CRP-family n=3 Tax=Cu... 88 1e-16 UniRef50_A4A439 Transcriptional regulatory protein n=1 Tax=Congr... 88 1e-16 UniRef50_UPI0001850CBE Crp/Fnr family transcriptional regulator ... 88 1e-16 UniRef50_B1WWP9 Transcriptional regulator n=27 Tax=Cyanobacteria... 88 2e-16 UniRef50_B4RUQ2 Cyclic nucleotide-binding protein n=2 Tax=Altero... 88 2e-16 UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Ta... 88 2e-16 UniRef50_UPI0001B54509 transcriptional regulator, Crp/Fnr family... 88 2e-16 UniRef50_B4RIS9 Transcriptional regulator(CAMP-binding) n=1 Tax=... 88 2e-16 UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillu... 88 2e-16 UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 88 2e-16 UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr fami... 88 2e-16 UniRef50_UPI0001C31542 transcriptional regulator, Crp/Fnr family... 88 3e-16 UniRef50_D2LTM0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 87 3e-16 UniRef50_B5YI76 Catabolite gene activator n=1 Tax=Thermodesulfov... 87 3e-16 UniRef50_A1ZKJ0 Cyclic nucleotide-binding domain protein n=4 Tax... 87 3e-16 UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax... 87 3e-16 UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Ta... 87 3e-16 UniRef50_Q5LL23 Transcriptional regulator, Crp/Fnr family n=1 Ta... 87 3e-16 UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 87 4e-16 UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax... 87 4e-16 UniRef50_B6IT06 Transcriptional regulator, Crp n=1 Tax=Rhodospir... 87 4e-16 UniRef50_A4V7K8 Putative cyclic amp receptor-family protein n=1 ... 87 4e-16 UniRef50_A1ZR18 Transcriptional Regulator, Crp/Fnr family, putat... 87 4e-16 UniRef50_C5CIJ4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 86 5e-16 UniRef50_A4VU00 CAMP-binding protein-catabolite gene activator a... 86 5e-16 UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Ta... 86 5e-16 UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr fami... 86 5e-16 UniRef50_Q6MNF7 Putative uncharacterized protein n=1 Tax=Bdellov... 86 5e-16 UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 86 5e-16 UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Ta... 86 6e-16 UniRef50_D0DBE2 Putative transcriptional regulator Crp/Fnr famil... 86 6e-16 UniRef50_C0N1U9 Cyclic nucleotide-binding domain protein n=1 Tax... 86 7e-16 UniRef50_C4XHU2 Crp family transcriptional regulator n=1 Tax=Des... 86 7e-16 UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax... 86 7e-16 UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 86 8e-16 UniRef50_A9B1R0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 86 8e-16 UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bact... 86 8e-16 UniRef50_B2UK41 Transcriptional regulator, Crp/Fnr family n=2 Ta... 86 8e-16 UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Ta... 86 9e-16 UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteri... 86 9e-16 UniRef50_C1F0X5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 85 1e-15 UniRef50_A8V0L7 Transcriptional regulator, Crp/Fnr family protei... 85 1e-15 UniRef50_A6G199 Cyclic nucleotide-binding:Bacterial regulatory p... 85 1e-15 UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Ta... 85 1e-15 UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Ta... 85 1e-15 UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 85 1e-15 UniRef50_C6XVJ1 Cyclic nucleotide-binding n=1 Tax=Pedobacter hep... 85 1e-15 UniRef50_C1XMJ3 cAMP-binding protein n=2 Tax=Meiothermus RepID=C... 85 1e-15 UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=... 85 2e-15 UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr fami... 85 2e-15 UniRef50_C1SKM4 cAMP-binding protein n=1 Tax=Denitrovibrio aceti... 85 2e-15 UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 85 2e-15 UniRef50_A6EU35 Transcriptional regulator, Crp/Fnr family protei... 85 2e-15 UniRef50_B1HNA1 Anaerobic regulatory protein n=2 Tax=Bacillaceae... 85 2e-15 UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 85 2e-15 UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 85 2e-15 UniRef50_C0YJ79 CRP/FNR family transcriptional regulator n=1 Tax... 85 2e-15 UniRef50_B6WW25 Putative uncharacterized protein n=1 Tax=Desulfo... 84 2e-15 UniRef50_Q09BB2 Cyclic nucleotide-binding:Bacterial regulatory p... 84 3e-15 UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Ta... 84 3e-15 UniRef50_C6D207 Transcriptional regulator, Crp/Fnr family n=2 Ta... 84 3e-15 UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 84 3e-15 UniRef50_Q7M956 PUTATIVE TRANSCRIPTIONAL REGULATOR n=1 Tax=Wolin... 83 4e-15 UniRef50_C6QGY2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 4e-15 UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 ... 83 4e-15 UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 4e-15 UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 4e-15 UniRef50_UPI0001B46169 Crp/FNR family transcriptional regulator ... 83 5e-15 UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 83 5e-15 UniRef50_C8ZXR8 Transcriptional regulator n=1 Tax=Enterococcus g... 83 5e-15 UniRef50_A4J9H6 Putative transcriptional regulator, Crp/Fnr fami... 83 5e-15 UniRef50_D2EJW6 Arginine deiminase n=1 Tax=Pediococcus acidilact... 83 6e-15 UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 6e-15 UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 6e-15 UniRef50_C6J2H1 Cyclic nucleotide-binding protein n=2 Tax=Bacill... 83 6e-15 UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 7e-15 UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 T... 83 7e-15 UniRef50_A1AQ27 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 7e-15 UniRef50_C6W196 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 7e-15 UniRef50_C2KT94 CRP/FNR family transcriptional regulator n=2 Tax... 83 8e-15 UniRef50_B6R2R5 Cyclic nucleotide-binding protein n=1 Tax=Pseudo... 83 8e-15 UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Po... 83 8e-15 UniRef50_P33779 Global nitrogen regulator n=199 Tax=Cyanobacteri... 83 8e-15 UniRef50_Q8KBR5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 8e-15 UniRef50_A9GWE0 Global nitrogen regulatory protein, CRP family o... 83 8e-15 UniRef50_UPI0001C312D2 transcriptional regulator, Crp/Fnr family... 83 9e-15 UniRef50_A9B4E4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 9e-15 UniRef50_C5SA72 Transcriptional regulator, Crp/Fnr family n=1 Ta... 82 9e-15 UniRef50_Q1VU70 Transcriptional regulator (Crp family) protein n... 82 1e-14 UniRef50_B2UG02 Transcriptional regulator, Crp/Fnr family n=2 Ta... 82 1e-14 UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostri... 82 1e-14 UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Ta... 82 1e-14 UniRef50_Q16C25 Cyclic nucleotide-binding protein, putative n=4 ... 82 1e-14 UniRef50_P22260 Catabolite activation-like protein n=26 Tax=Gamm... 82 1e-14 >UniRef50_P0AAP6 Uncharacterized protein yaiV n=77 Tax=Enterobacteriaceae RepID=YAIV_ECO57 Length = 207 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV Sbjct: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 Query: 61 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA Sbjct: 61 LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV Sbjct: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 Query: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 LAALRKGGYIEMNKGKLVAINRLPSEY Sbjct: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 >UniRef50_C9XX32 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XX32_CROTZ Length = 208 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 84/208 (40%), Positives = 129/208 (62%), Gaps = 1/208 (0%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 ML +VKPL L + L GT F+ + ++ F ++ + + EG +++ RE+N Sbjct: 1 MLDLVKPLHHLDALQRHLGPAGTPFDIDAHCELSFINEQGEQQCWFFKEGSLNVWREQNH 60 Query: 61 L-IGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 + + + +P + +D ++ + Y L++E C G+ +P ++ I +IE QLW+ +W Sbjct: 61 IHVDLMTSPLYLSFSDAVIPEPLRYTLVTETPCRGFRMPVRRAIDIIEHRQLWKAFCHWQ 120 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 W R E RD Q IG +Y QIRATLL+M W+ E+R+++GV+++I T ISRSV+AE Sbjct: 121 TWLMRWFEWRDAQFIGATTYSQIRATLLTMAGWSPEVRAQVGVIHHIQNHTHISRSVIAE 180 Query: 180 VLAALRKGGYIEMNKGKLVAINRLPSEY 207 VLA LRKG YIEM KGKLVA+N+LP Y Sbjct: 181 VLAELRKGKYIEMQKGKLVAVNKLPLNY 208 >UniRef50_UPI00017F30F5 putative DNA-binding transcriptional regulator n=2 Tax=Enterobacteriaceae RepID=UPI00017F30F5 Length = 209 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 99/205 (48%), Positives = 148/205 (72%), Gaps = 2/205 (0%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIF-SSDVNNEDTFVILEGVISLRR-EENVLI 62 KPL E +L CL GT F+ + ++ + +++ + TFVI G++++ R + +L+ Sbjct: 5 AKPLSELSRLITCLEVAGTLFKNDPQQLITTGNNNDDEPSTFVIQSGLVAVHRKSDELLV 64 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 GI +AP+I GL+ + + + Y L+++ C+G++LPA + LI+Q LW+DAF WL+W Sbjct: 65 GIARAPFIYGLSAWINDSYLEYSLMAQTPCSGFYLPASRACQLIQQQHLWQDAFCWLSWI 124 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 N IL RD QL+G+NSY QIRA L++M +W++ LRS+IGVMN+I + TRISRSVVAEVLA Sbjct: 125 NHILGKRDTQLVGNNSYSQIRAMLINMAEWDDTLRSKIGVMNHIQRSTRISRSVVAEVLA 184 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 ALR+G YI M++GKLV+INRLP++Y Sbjct: 185 ALRQGNYINMSRGKLVSINRLPTDY 209 >UniRef50_B5BLI5 Putative uncharacterized protein n=34 Tax=Salmonella enterica RepID=B5BLI5_SALPK Length = 234 Score = 203 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 7/209 (3%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL-IG 63 KP L L +G F + + + ++ G++S R++N L I Sbjct: 27 AKPHAAIDALFSALLPFGQPFTLGIGDEF-YLQANDEHYIVLLESGIVSFCRDDNRLHIS 85 Query: 64 ITQAPYIMGLADGLM-----KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 + AP ++G+ D + L++E CTG + I + ++ LW D Sbjct: 86 SSFAPSVVGMVDSYGATYNVPARPEHFLLAETVCTGRFVRLPDFIKIADECDLWHDVARC 145 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 LA++ ++ RD +L+G NSY ++RA L+ + + + R I V+N+I +RT ISRS Sbjct: 146 LAYRLMVMSARDRELVGVNSYLKVRALLIEIWAYPQAYRENIIVLNFIQRRTGISRSRTM 205 Query: 179 EVLAALRKGGYIEMNKGKLVAINRLPSEY 207 ++L+ L+KGGYI ++ G+L A+ +LP Y Sbjct: 206 KILSELKKGGYIHIDNGRLTALGKLPVAY 234 >UniRef50_A8AFU1 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8AFU1_CITK8 Length = 225 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 6/206 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIG 63 +KP++ KL L + E +Q+I + + +++L+G I + R + ++ Sbjct: 23 LKPIEHVEKLIAHLKPHANTRE-TKCRQIINNENNRPHQCYLLLKGTIGVFRARDGFMLN 81 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNC-TGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 AP+I GL++ L+ Y L+ C +P ++ +I LW L + Sbjct: 82 SEVAPFIFGLSNQLVD--AEYLLMRSEECSEIAFIPLEKVNDVIANENLWESLAKVLIYT 139 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 + ++ SY+ IRA L ++ + E R I NYI RT +SRS V ++LA Sbjct: 140 AGRVYDHCTRISAPTSYDIIRAQLYELMRESNEFRQNITAANYIQSRTFLSRSSVMKILA 199 Query: 183 ALRKGGYIEMNKGKLVAI-NRLPSEY 207 L+KGGYI ++G L I +P +Y Sbjct: 200 DLKKGGYIVTDRGVLKQIQQNIPLKY 225 >UniRef50_B5XXF4 Cyclic nucleotide-binding domain protein n=4 Tax=Enterobacteriaceae RepID=B5XXF4_KLEP3 Length = 223 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 4/204 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIG 63 +KP + L K + R V + D F++L+G ++L R + +++ Sbjct: 23 LKPFRHIEALIKHVLPAAERVVIGRGDVVHYYKDDIR-QCFLLLQGSVALHRRGDGIVLN 81 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 AP+I+G++ + + +P ++ Q LW L + Sbjct: 82 SESAPFILGVSSQFSSE--HLYVRALETSEIARVPLDCFNHIVAQLDLWEHFSKLLIYTA 139 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 + Q+ ++Y+ IR L+ ++ + +R +I YI RT +SRS + +LA Sbjct: 140 SRVYEHCAQISQMSAYDIIRFQLVELMQEPDAIRQKITAAAYIKSRTYLSRSGIMRILAE 199 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 LR G YI M +G L+ IN LP +Y Sbjct: 200 LRTGKYITMERGILLDINHLPRKY 223 >UniRef50_B5XXF5 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B5XXF5_KLEP3 Length = 209 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 6/211 (2%) Query: 1 MLSVVKPL---QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE 57 M S +P +L L Y T + +Q+ F + ++ILEG +++ R Sbjct: 1 MSSSERPHKGSPYAQELITHLQPYCTPRKTERGEQLDFKVNGQ-GVCYLILEGTVAVYRR 59 Query: 58 -ENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAF 116 +N+++ ++P + GLA+ L + + C + + +I++ LW Sbjct: 60 NDNMMLSTARSPAVFGLAN-LTDIYFDDYIKTINPCLIGEISTARVNDIIKEKSLWGLLS 118 Query: 117 YWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSV 176 L + L + +YE IR LL++I+ +E R+ + YI ++T +SRS Sbjct: 119 KQLMFVYGRLYNNVMPQGAPTAYEMIRQQLLNLIEEDESYRAAVTAELYIREKTHLSRSG 178 Query: 177 VAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 V +LA L+ GG+IEM +G+L+ I++LP+ Y Sbjct: 179 VMRILADLKTGGFIEMEEGRLIKIHKLPARY 209 >UniRef50_UPI00019F1C16 hypothetical protein CATC2_07750 n=2 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1C16 Length = 228 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 6/209 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 KPL + L G FE N ++ F + ++EG S+ + + IG Sbjct: 20 TKPLTSIKNVYSKLEAIGKPFELNTGMRLYFRDENQLSYIIFLVEGCFSVYHQSSELNIG 79 Query: 64 ITQAPYIMGLADGLMK-----NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 I +P I+ L + + +++E +C G+ +P + I + LW D Sbjct: 80 IGFSPTILNLVGIYNQYHEGQKPPRHFMVAETHCKGFKVPLETFIEQCNTHYLWPDISQI 139 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 L + ++ + + QL+ ++Y +R+ LL + + E++R+ + + I +RT +SRS V Sbjct: 140 LVQRLMVMSMIEEQLVCSDAYSAVRSILLEIWLYPEDIRNNFNITSVIQRRTNLSRSRVM 199 Query: 179 EVLAALRKGGYIEMNKGKLVAINRLPSEY 207 ++L+AL++GGYI++ GKL+ +N LP + Sbjct: 200 DILSALKQGGYIKIRTGKLIELNFLPKAF 228 >UniRef50_UPI0001C342D9 hypothetical protein CATC2_07960 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C342D9 Length = 212 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 3/205 (1%) Query: 4 VVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL-I 62 ++ P + L + + K++ S +++L+G +S R++N + + Sbjct: 10 LMTPSPFTESIIAKLEPHCEIRNISPRKRLYPKSG-GKYYCYLLLKGYVSYHRDKNDIAV 68 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 AP + GL + + +I + + +P ++ I +IE++ LW+ + Sbjct: 69 LTASAPTLFGL-NYIASENITTYIKTLPPAIIGVMPLEKAIEIIEEHHLWKAVAQHMMVL 127 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 + L + + Q+ SYE I+ LL ++ NE R I +NYI +T++SRS + +L Sbjct: 128 SNKLYIINEQMSAPTSYELIKFLLLQLMSENESYRKSITAVNYILGKTQLSRSGIMRILT 187 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 L+ GGYIE+++G L+ +N+LP+++ Sbjct: 188 NLKAGGYIEIHRGCLIRLNKLPAKF 212 >UniRef50_B5BAM2 Putative transcriptional regulator protein n=33 Tax=Salmonella enterica RepID=B5BAM2_SALPK Length = 223 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 7/209 (3%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 K LQ + + + + + K + N +I +G I + RR +++++G Sbjct: 16 EKNLQAILNIHRHVIQNISPVTITAGKTLDIKI-DNRSHILLITKGAIKVCRRIDSIVMG 74 Query: 64 ITQAPYIMGLADGLMK-----NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 +P I+GL D + I+E C Y +P K + + ++ LWRD Sbjct: 75 CGVSPMILGLVDAYADLYQLEENSDVFFIAETTCEYYPVPVKDFVEIADEKHLWRDISNI 134 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 L ++ + RD LIG ++Y QI+A LL + + E R I N+I QRT +SRS + Sbjct: 135 LMYRIAFMTNRDRNLIGQDAYSQIKALLLELWSYPESSRFEINAQNFIQQRTGLSRSRIM 194 Query: 179 EVLAALRKGGYIEMNKGKLVAINRLPSEY 207 +VL+ L+ G YI++ G+L+ + LP + Sbjct: 195 QVLSELKAGDYIKILHGRLLELRNLPVSF 223 >UniRef50_UPI00019F1389 hypothetical protein CATC2_03035 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1389 Length = 231 Score = 180 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 99/208 (47%), Gaps = 6/208 (2%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE-NVLIGI 64 KP++ L L YG + K + + + +I +G++S + + Sbjct: 24 KPMKAIEALFLHLLPYGRKILLKKNKCYRLNEEQDGIGLVLITDGLVSAINSDTGHFVST 83 Query: 65 TQAPYIMGLADGLM-----KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 P ++GL G I L +E + + + +P ++ + + ++ +LW L Sbjct: 84 LYPPSLLGLCHGYSAFYNVPGRIRSTLHAETDVSLFFIPLQRFVDVADKEELWHHVARIL 143 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 A + + ++ IG +SY I++ + + + E R+ I + ++I +++ +SRS + + Sbjct: 144 AHRIITMVNKEKTYIGMDSYTIIKSIIEEVWLYPENYRTHISLPHFIQKKSGLSRSRIMK 203 Query: 180 VLAALRKGGYIEMNKGKLVAINRLPSEY 207 +L L+ GGYI + KG+L ++ +LP Y Sbjct: 204 ILLDLKIGGYINIVKGRLTSVTKLPLSY 231 >UniRef50_B5XTC2 Putative uncharacterized protein n=5 Tax=Klebsiella RepID=B5XTC2_KLEP3 Length = 248 Score = 179 bits (454), Expect = 5e-44, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 7/210 (3%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIG 63 KPL L + F F ++ EG+ SL E N++I Sbjct: 39 TKPLFAVESLLSAFLPASSPFALPRSTYYRFPPIQAESGLILLEEGIASLCHAENNMVIS 98 Query: 64 ITQAPYIMGLADGLM-----KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 +P ++GL DG L +E + G+ + + + ++ LW++ + Sbjct: 99 TIFSPSLLGLIDGYGVFNGIPEKHHCSLFAETDLRGHWIAHQAAVEILNAQNLWQEMAHV 158 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVA 178 LA + +L +R +++G +SY +R L + D+ E R +I V+++I +RT +SRS + Sbjct: 159 LAQRLMVLSMRSQEMMGVDSYLMVRTLLTELADYPEAYRRQINVLSFIQRRTNLSRSRIM 218 Query: 179 EVLAALRKGGYIEMNKGKLVAI-NRLPSEY 207 +L+ LRKG YI +++G L I + LP+ + Sbjct: 219 SILSELRKGDYITIHRGVLRTIAHPLPAHF 248 >UniRef50_A4W7R9 Putative inner membrane protein n=1 Tax=Enterobacter sp. 638 RepID=A4W7R9_ENT38 Length = 202 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 3/204 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIG 63 +KP K+ + +S TR E+++I + TF++ G +++ R +++L+ Sbjct: 1 MKPENHILKIIEAISD-PTRIRNGRERKIISVDNYEEAMTFILHSGTVAIHRSSDSLLLK 59 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 +AP I+G+ + L+ + + + + + L K I +IE+ LW++A Y+ + Sbjct: 60 FVEAPMIVGM-NILIDTNEGFYMQAHSDVEYEILSNKSVIDIIERENLWKEAAYFFMFGV 118 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 + L G +YE I+ L+S++ +ELR + +YI +T ISRS V ++L+ Sbjct: 119 QRLLEAHQTSAGRTTYELIKQNLMSLMAEKDELRMMVNACDYIMDKTHISRSRVMKILSD 178 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+ G YI + +G L+ IN+LP Y Sbjct: 179 LKTGDYIVIERGVLIKINKLPETY 202 >UniRef50_A4WED3 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WED3_ENT38 Length = 202 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIG 63 +KP + KL +S R + + E+Q+I + F++ +G ++ R +++L+ Sbjct: 1 MKPAEHITKLIASVSD-CARIQNSRERQIISLQQYTDPMCFILHKGTAAVYRGYDHLLLS 59 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 +AP+IMGL L KN Y + + +P + I++ LW Y+ + + Sbjct: 60 HIKAPHIMGLNLLLEKNSELYF-QARSSIAYEIVPRSRFEQNIKEQHLWEPLAYYFMFSS 118 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 + + G ++Y+ +R L+++++ +EELR +YI ++T +SRS + ++L+ Sbjct: 119 KRFLQNNFISSGVSTYDLVRNNLIALMNEDEELRLATNTCDYIQEKTLLSRSGIMKMLSD 178 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+ G +IE+++G L+ IN LP++Y Sbjct: 179 LKHGSHIELHRGVLITINNLPAKY 202 >UniRef50_A4WAX2 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAX2_ENT38 Length = 208 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 8/205 (3%) Query: 4 VVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLI 62 + +P +L + L+ + + + + + +I G I + R + +LI Sbjct: 11 LNQPFPWAKQLVESLAPFA-PIRSYRKGIRLGLIENGVQVCRIIHSGTIEVHRSSDGLLI 69 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 AP I+GL +++ L ++ I +N LW A + Sbjct: 70 VTLPAPGILGL------GVHDAFIVTAETSKVSTLTVEELQRHISENGLWEVAAQHMMVV 123 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 L QL +YE IR L + R + + YI +T +SRS + ++LA Sbjct: 124 TNKLYSYSKQLSAPTAYEVIRNQLRELSHEPAHFREHVTIERYIRDKTHLSRSSIMKILA 183 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 L+ GGYI + G+L I LP++Y Sbjct: 184 ELKTGGYIVIKDGRLCEIKHLPAKY 208 >UniRef50_A8GI54 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Serratia proteamaculans 568 RepID=A8GI54_SERP5 Length = 226 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 7/204 (3%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIGI 64 KP +L L +Q N F++L+G ++L R +++L+ Sbjct: 28 KPSDIIARLMAELKPEAVEVTARRSRQF----SGKNPQVFLLLQGAVNLHRQSDDLLMTT 83 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQN 123 AP+I+GLA+ L Y L E +C + + + + ++Q+ LW D LA+Q Sbjct: 84 IYAPHIIGLAELLHPVGQTY-LHLEKDCEIHVVAGSKVLQKLDQHPMLWADVSRILAYQL 142 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 LRD+ L+ +++Y+ IR LL +I+ E R + YI +RT ++RS + + L+ Sbjct: 143 HFASLRDLHLLNNHAYDAIRGKLLELINAPESTRLDYSALRYIQERTTLARSTILKCLSD 202 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+ GGYI M KG L + LP Y Sbjct: 203 LKTGGYIAMEKGHLTQVFNLPQRY 226 >UniRef50_C1M4J5 CRP/FNR family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=C1M4J5_9ENTR Length = 209 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 4/205 (1%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIG 63 V+P Q +L + L + + +++++ ++ L+G +S+ R + +LI Sbjct: 7 VRPEQSIQRLMQALEPIAEKMKVVPRRRIMWKYKNKP-QLYLFLQGELSILRSSDGLLIV 65 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 P++ G+A+ + + L +E T + A + L Q LW DA L++ Sbjct: 66 TVYEPHLFGIAEMIQP-VHGHLLRAEAESTLLRVDADKARELFHQQGLWEDAAAVLSYHT 124 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 L RD ++ +Y IR L MI EE R R+ +++YI RT +SRS V V++A Sbjct: 125 GYLFYRDDLVVQQRTYSVIRNHLEEMILLPEETRKRVSILDYIQDRTHLSRSSVLNVVSA 184 Query: 184 LRKGGYIEMNK-GKLVAINRLPSEY 207 L+KGGYI+ + G L +IN+LP + Sbjct: 185 LKKGGYIDFERGGYLTSINKLPERF 209 >UniRef50_UPI00019F10BE putative transcriptional regulator protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F10BE Length = 217 Score = 170 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 3/204 (1%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFS-SDVNNEDTFVILEGVISLRREENVLIGI 64 KP+Q L LS F+ Q F + V+LEG +RR + +++ Sbjct: 15 KPVQHINALIGPLSCDRRVTVFDAGTQKPFPHISEHVGPIIVVLEGGFEIRRTDGLVLVR 74 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNR 124 PY++GL + L + + L ++ ++++ LW LAWQ + Sbjct: 75 GGGPYVLGLGEALYGRGR-HTIYCTTALNIVSLSKEEAFEIVDKESLWSHVANLLAWQLQ 133 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAAL 184 ++ RD +L ++Y IRA L + + ++++I QRT +SRS++ +V++ L Sbjct: 134 LMVARDEELTSVDAYTMIRAKLSELYMLKTQFGLSFNIVDFIQQRTNLSRSIIHQVISEL 193 Query: 185 RKGGYIEMNKGKLVAIN-RLPSEY 207 ++G YI + +G+LV + LP +Y Sbjct: 194 KRGEYITIVRGRLVDMKSSLPQKY 217 >UniRef50_A7MEB9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MEB9_ENTS8 Length = 208 Score = 170 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 6/204 (2%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIGI 64 +P + L +GT E+ + N E ++L G ++L R+ +N++ Sbjct: 9 RPDAQINALINAFHCHGTIKEYPRGSCL----AQNEESVNILLSGSLALTRDWDNLIFFE 64 Query: 65 TQAPYIMGLADGLMKNDI-PYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 T P I G++ ++LI + + + + +IE+ +LW++ + +++ Sbjct: 65 TNRPNIFGISLQSNNARFEHFRLIIKEDSLVKRISRADFLAVIEEQKLWKELSHVISFYY 124 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 +L ++ +SY +R +L+++ + E R I YI T +S+S V +V+ Sbjct: 125 HVLLWKNYHFYAADSYMLVRKSLITLGEMPLESRININASQYITSTTNLSKSYVMKVIQE 184 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 LRKGGYIE+ +G+L+ I +LP +Y Sbjct: 185 LRKGGYIEIQRGRLITIGKLPQKY 208 >UniRef50_A7MR68 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MR68_ENTS8 Length = 219 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 6/204 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGI 64 +P + +L L G F + + + VI +G +S+ R + L+ I Sbjct: 21 ERPEEAINQLIDALKISGELRRFASGAHI----PAQPDHIIVIEQGALSMHRMMDGLMMI 76 Query: 65 TQ-APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 P ++G+ + + + +E C +P +IE QLWR+ ++W Sbjct: 77 ESTRPQLLGITYN-NQFSHHFTIKAESVCEARLVPRSDFEAIIETRQLWRELLLVVSWYY 135 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 +L + +G SY IR L+ + NE+ R I ++I +T +S+S + +V + Sbjct: 136 DVLYWKSYHYLGRQSYTLIRNCLIELAAKNEQEREEINACDFIRGKTNLSQSYILKVFSD 195 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 LRKG YI++++G+L +IN+LP Y Sbjct: 196 LRKGDYIDISRGRLKSINKLPDRY 219 >UniRef50_A4WAX1 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAX1_ENT38 Length = 221 Score = 166 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 5/206 (2%) Query: 3 SVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVL 61 S+ KP +L L+ + + + F N + +++ EG + + RR++ + Sbjct: 18 SIEKPQDHILRLISTLAPHSQLVPADKLPTLDFVR-TNTKLCYLLEEGHVIINRRDDGMT 76 Query: 62 IGITQAPYIMGLADGLMKNDIPYKLISEGN-CTGYHLPAKQTITLIEQNQLWRDAFYWLA 120 + AP++ G L N P I L + I +IEQ LW L Sbjct: 77 LNTESAPFVFGFT--LNSNLHPRLCIRPSPDAVLRRLSLENAIQIIEQESLWEPLAQLLI 134 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 + + L +L YE +R+ L+ +I+ + ++R NYI R +SRS + + Sbjct: 135 FISARLFRHCTRLSQSGMYETVRSLLIELINESPKIRQAESTYNYIQNRCLLSRSGIMSI 194 Query: 181 LAALRKGGYIEMNKGKLVAINRLPSE 206 LA LR G+IE+ G+LV IN LP + Sbjct: 195 LATLRAHGHIELENGRLVKINNLPQK 220 >UniRef50_A8AFU0 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8AFU0_CITK8 Length = 210 Score = 165 bits (419), Expect = 8e-40, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 5/205 (2%) Query: 4 VVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN-VLI 62 + +P L L+ + + +F GV+S+ EN +L+ Sbjct: 10 LKQPSPYAIALLNALTSEQDFKRYPRGSRFVFVQG-GEHQCLFFRTGVVSIENIENSLLL 68 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQ 122 GI AP +G L + + + C +P + IE+ LW + Sbjct: 69 GIASAPVSLGFTSALSDKLL---IRALEECEAATIPLDDVMETIERKHLWEIMAKHMIIV 125 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 L +++ +Y+ + L ++ E +RS++ YI +RTR+SRS V ++L+ Sbjct: 126 TNKLFIQNEMATAPTAYDLLCYQLQALSQEPESIRSQMAAYQYILERTRLSRSSVMKMLS 185 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 AL+KGGYIE+ +GKL+AIN LPS + Sbjct: 186 ALKKGGYIELEQGKLIAINHLPSRF 210 >UniRef50_A8AIP5 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AIP5_CITK8 Length = 207 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 6/204 (2%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIG 63 ++P E ++ S Y + +K + ++E +I+ G + RR + + + Sbjct: 9 IRPHHEMERIISLTSGYKEKTLKKWQK----ITTSDSEYIHIIVSGDVEFRRTSDELCMF 64 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQN 123 Q I GL+ + Y L + N + + + L+ ++ LW D L+W Sbjct: 65 TLQGQCIFGLSAIFYGSLHMYGL-ARTNTVVRSIKKDEFMRLLTEHSLWPDLTRVLSWYI 123 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 +L RD L+ ++Y IR L+ + + I V +YI + T +RS + ++L+ Sbjct: 124 CLLSKRDDVLVARSAYSVIREFLIEINELIIHHNRDINVYDYIQEYTNFARSTIIKILSD 183 Query: 184 LRKGGYIEMNKGKLVAINRLPSEY 207 L+KG YI + K +L+++ LP +Y Sbjct: 184 LKKGNYIVIEKSRLMSMTTLPEKY 207 >UniRef50_UPI00019F17B7 hypothetical protein CATC2_24059 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17B7 Length = 214 Score = 163 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 9/212 (4%) Query: 3 SVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVN--NEDTFVILEGVISLRREENV 60 + KP+ K+ F + K + + + F +L+G E Sbjct: 5 DIEKPIDSIEKVMAHF-PVTQPFLMESGKILPLKQKNDTIPKKIFFLLDGAFIGSTGEGD 63 Query: 61 ---LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFY 117 +GI +P I+GL L + + S C + +I+ N LW D Sbjct: 64 KKCNLGIATSPAIIGLG-QLGGTNAFIEFESISPCLIDTINLDDFCNIIDNNNLWLDICK 122 Query: 118 WLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNE-ELRSRIGVMNYIHQRTRISRSV 176 + L +R ++YE IR+ L+ M + ++ R V+ Y+ +R+SRS+ Sbjct: 123 IMIPALGTLSIRASTSGLQSAYEIIRSYLIYMDNEKSFSIKERYTVVKYMQTFSRLSRSM 182 Query: 177 VAEVLAALRKGGYIEMNKGKLVAINR-LPSEY 207 + ++LA L+ GG+IEM GKL+ INR LP ++ Sbjct: 183 ILKILAELKVGGFIEMENGKLIRINRNLPEKF 214 >UniRef50_UPI00019F1602 hypothetical protein CATC2_05660 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1602 Length = 212 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 89/192 (46%), Gaps = 3/192 (1%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-ENVLIGITQAPY 69 L L I +++ EG I +RR + +++ QAP Sbjct: 19 IAILFNALLPLSEAQSLYRSGSFI-MDSQGENGIWLLTEGRIVIRRRIDGLILASQQAPM 77 Query: 70 IMGLADGLMK-NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILEL 128 ++G+A+ + + Y + + CT + + +T++ +++LW A+ +++ Sbjct: 78 MLGMAEFFLPTGNNFYDIEAVSPCTTHVVKKTDFMTIVNRDRLWESVAIVEAYIIQVMSQ 137 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGG 188 RD + + + + L + +++R RI + YI +RT +SRS + + LA L++ G Sbjct: 138 RDRLITSRTATDMVWGHLELLQQEPDDIRKRIPAVQYIRERTGLSRSTIMDTLARLKRQG 197 Query: 189 YIEMNKGKLVAI 200 I++++G L+ I Sbjct: 198 AIQLHRGHLICI 209 >UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=3 Tax=Gammaproteobacteria RepID=Q2SDD5_HAHCH Length = 216 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 8/200 (4%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYI 70 + L ++ F + ++ + +++ ++I+ G + + + V + +A Sbjct: 18 LQHLEKHA-VFRCFQKNSIVITEGDHSDSLYIIVSGRVRVFCSDENGKEVTLNDLKAGEY 76 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G + +++ C L + Q L + L + R L Sbjct: 77 FGELALFDDKERSASVMATEPCRFLMLNKSSLLEAFRQTPDLAYNLIIHLTQRVRALTNN 136 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEE--LRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 L + Y ++ +TLL + + + + I R SR +V+ ++ L G Sbjct: 137 VKNLALMDVYGRVASTLLQLSERKGDRLITEIPLTQQEIANRVGASREMVSRIMKDLEIG 196 Query: 188 GYIEMNKGKLVAINRLPSEY 207 GYI++ K K+V + LP+ Y Sbjct: 197 GYIKVEKKKIVINDALPAHY 216 >UniRef50_C9XZ73 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XZ73_CROTZ Length = 203 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 6/201 (2%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-RREENVLIGI 64 KPL E ++ + YG + +I G SL R+ + +L+ Sbjct: 6 KPLAEIYRIADIFNSYGNWSRAEKNTLIPLRDGE----ICIIRGGQFSLMRQSDRLLLEK 61 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNR 124 + AP ++GLA L K+ KL ++ C +P + IE+N +W Sbjct: 62 SSAPSVLGLARNLGKSQF-AKLQADSECHYQLIPFDYFMQEIEKNHCQLHLLILSSWIIN 120 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAAL 184 IL R+ +IG NS+ I+A + + +E +R+RI V +YI ++T +SRS+V + L+ L Sbjct: 121 ILCYREEIMIGRNSFSMIKANIDCLAAMDEFMRNRINVADYIVKKTNLSRSMVMKTLSQL 180 Query: 185 RKGGYIEMNKGKLVAINRLPS 205 R IE++KGKLVA++ LP Sbjct: 181 RSAKNIEISKGKLVAVHHLPD 201 >UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n=6 Tax=Gammaproteobacteria RepID=Q3JC77_NITOC Length = 214 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 7/197 (3%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGL 73 L R + ++ ++ ++IL G + + + V++ +A G Sbjct: 18 LLRGCGVTRTYPKYTILIHEGDLSDSLYIILSGKVKVYISDEGGKEVILRTQKAGEYFGE 77 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQ 132 L K +++ + + ++ + L + R L Sbjct: 78 LALLDKGPRSASVMTLDKSRLSVVSKTIFNRCLTEHPDFALKLLCALTQRVRSLTENVKN 137 Query: 133 LIGHNSYEQIRATLLSMIDWNEE--LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYI 190 L + Y ++ TLL + + I QR SR +V+ ++ L GGYI Sbjct: 138 LALLDVYGRVARTLLDLAIEKGGKLIIEERPTHQEIAQRVGASREMVSRIMGDLATGGYI 197 Query: 191 EMNKGKLVAINRLPSEY 207 E+ ++ +RLPS + Sbjct: 198 EVTSKTIIIPHRLPSAW 214 >UniRef50_B9Z4U0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Chromobacterium group RepID=B9Z4U0_9NEIS Length = 227 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 65/205 (31%), Gaps = 13/205 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYI 70 L + F N+ +++ EG I + + + + + Sbjct: 24 LDELIDLAVPLNLRKGDPL-FLEGGNSAAIYLLTEGRIESFVSDGMGKKFVFMFNEPGEL 82 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQ------NQLWRDAFYWLAWQNR 124 MG L + ++E +C +++ + LA R Sbjct: 83 MGEVSYLDGGPCAWSAVAERDCQLLMFRRTDLVSVFGVADGLPCETIRSKILLRLAGMVR 142 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRS--RIGVMNYIHQRTRISRSVVAEVLA 182 + L + Y +IR ++ + + + I + SR +VA +L Sbjct: 143 RISTSAKNLALLDVYGRIRILFNELMVEEDGVLQLDKPLTQQEIADQIGSSREMVARILK 202 Query: 183 ALRKGGYIEMNKGKLVAINRLPSEY 207 L G YI M ++V + LP + Sbjct: 203 ELVYGHYIRMENRRIVLLKMLPENF 227 >UniRef50_C1DB51 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB51_LARHH Length = 220 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 78/203 (38%), Gaps = 11/203 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLI-----GITQAPY 69 L R G F +++ + + D F +++G+++ + + G +A Sbjct: 19 LDELLRQGELVTFEP-DELVCEQNTVHSDVFFLIQGLMNATMQTGEGLRPFAFGYIKAGS 77 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILEL 128 +GL + + + + + + T ++++ W+ +A L Sbjct: 78 CIGLPALAGQTLLNATVHAVHPSQCWKISTDLLETAMDRHPQAWKTCAQQIALGVAHLLD 137 Query: 129 RDVQLIGHNSYEQIRATLL---SMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALR 185 L + Y ++R L M + +R +SR +V ++ ALR Sbjct: 138 YIEMLAQPDGYTKLRRLLEKMDEMARECPAFPPAPITQRDLGERIGLSREMVNRMMRALR 197 Query: 186 KGGYIEMNK-GKLVAINRLPSEY 207 +GGYIE+++ G++ LP + Sbjct: 198 QGGYIEVDEFGRIRVTKPLPRRF 220 >UniRef50_B1XXN2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXN2_LEPCP Length = 237 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 10/201 (4%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVIS-LRREENV---LIGITQAPYI 70 + L+ + ++ + +++L G + + +N G+ Sbjct: 39 LRALAERAEPRRYRKG-VLLIQEGDQGDTLYIVLSGRVRAFSQGDNEREITYGVYGPGEY 97 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELR 129 +G L +I+ +P + + I Q + + + + R L Sbjct: 98 VGEIS-LDGGPRSASVITVEPTACVVIPRQTLLLHIAQYPEFAFELLAKVIRRARAATLS 156 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSRIG---VMNYIHQRTRISRSVVAEVLAALRK 186 QL ++ Y ++RA L S+ + + ++G + R SR +V+ ++ L + Sbjct: 157 AKQLALNDVYGRLRALLESLAEAQPDGTRQVGERLTHQDMANRLGCSREMVSRLMKDLEE 216 Query: 187 GGYIEMNKGKLVAINRLPSEY 207 GGY+ +N LV LP+ + Sbjct: 217 GGYVAVNGHTLVLPRALPARW 237 >UniRef50_C4X4Z2 Putative uncharacterized protein n=4 Tax=Klebsiella RepID=C4X4Z2_KLEPN Length = 255 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 6/174 (3%) Query: 39 VNNEDTFVILEGVISLRREENV-LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHL 97 + +L+G ++L + L+GI A +GL + + Y G C + Sbjct: 83 PQPGYLYFLLQGQMTLAFGDEQNLVGIVIAHMPLGLLEHYCPSVALYY-QCLGECQLAKI 141 Query: 98 PAKQTITLIEQNQ--LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATL-LSMIDWNE 154 A + + ++ LA+ + S++ I++ L + Sbjct: 142 TASDFERIFFHSSPGYMQELTTILAYMGIFALDAHYERGSQTSFQTIKSMLSRYLYRGEI 201 Query: 155 ELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN-RLPSEY 207 + + +I +RT +SRS V +VLAALR+GGYI + KGKL++I+ +P ++ Sbjct: 202 DGGQHESLSAFIIKRTNLSRSYVYQVLAALREGGYITVKKGKLISIDRHIPEKF 255 >UniRef50_C6L0Y1 Crp/Fnr family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6L0Y1_9BACT Length = 216 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 9/181 (4%) Query: 35 FSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPYKLISEG 90 ++I+EG + + + V + G LM + +++ Sbjct: 37 IEKGDPPTSMYIIVEGRVRVYIADENQKEVTLNTQGPGEYFGELAILMDSPRTASVMTTE 96 Query: 91 NCTGYHLPAKQTITLIEQNQLWRDAFYW-LAWQNRILELRDVQLIGHNSYEQIRATLLSM 149 + Y + + + + A LA + L L +N Y ++R L+S Sbjct: 97 DSAFYVMEKDEFKDFLAAHPRSAFALIQSLARRVADLTDEVSGLALNNVYGRVRNLLVSQ 156 Query: 150 IDWNEELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSE 206 + R + I +R SR +V+ + LR GGYI + + LP++ Sbjct: 157 AQQ-QNGRKVVAEKMTQQDIARRVGASREMVSIIFKDLRAGGYITVEGSHIFINKHLPAQ 215 Query: 207 Y 207 + Sbjct: 216 W 216 >UniRef50_Q124D1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Polaromonas sp. JS666 RepID=Q124D1_POLSJ Length = 219 Score = 129 bits (325), Expect = 6e-29, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 13/207 (6%) Query: 13 KLDKCLSRYGTR--FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQ 66 +L L R +K V+ + + FV+L+G + + + + G Sbjct: 14 RLPPELRALAVRGMVRSYPKKAVVINEAEIGDSLFVLLKGSVKVFSMDESGREITFGRIH 73 Query: 67 APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRI 125 A G L +I+ CT + + + + + + + R Sbjct: 74 AGDYFGEMS-LDGGPRSASVITVEPCTCAVVNRTEVGEHLASAPEFALNLVMRVIRRARD 132 Query: 126 LELRDVQLIGHNSYEQIRATLLSMIDWNEE-----LRSRIGVMNYIHQRTRISRSVVAEV 180 + + Y ++ A L + I R SR +V+ + Sbjct: 133 ATEAARNMALLDVYGRLIAVLEKQDGLTTSTTAAGVTLEAITHQEIASRVGASREMVSRL 192 Query: 181 LAALRKGGYIEMNKGKLVAINRLPSEY 207 L L KGGYIEM ++ + +LP + Sbjct: 193 LKDLEKGGYIEMETKRITLLKKLPLRW 219 >UniRef50_UPI0001C33F28 CRP/FNR family transcriptional regulator n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33F28 Length = 206 Score = 129 bits (324), Expect = 7e-29, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 5/200 (2%) Query: 4 VVKPLQEFGKLDKC-LSRYGTRFEFNNEKQVIFSSD--VNNEDTFVILEGVISLRREENV 60 ++KP E + LS R +E + + NN D + EG + +RR + Sbjct: 1 MMKPNDEMKLIISKWLSSGAARIIIKSEIGIERTLGVKPNNTDFVFLTEGAMDIRRTMDD 60 Query: 61 LIG-ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 L+ APYIM D Y I + Y + + + L+E+ L+++ + Sbjct: 61 LVFCTALAPYIMSGTDHPESEAYFYGEI-RAHSVAYRIKKETALNLVEKFNLFKELWIVE 119 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 ++++ + RD L G + I + + E R I V ++ +RT+ S+S + Sbjct: 120 KYKSQAIWRRDANLNGASVKVAIGELITVLSMLPPEFRKSISVYKFLQERTKYSKSTIMR 179 Query: 180 VLAALRKGGYIEMNKGKLVA 199 V+ R G +++ G L+ Sbjct: 180 VVNHYRDNGQLDIKNGILIE 199 >UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWR3_HALOH Length = 226 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 63/184 (34%), Gaps = 11/184 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKND 81 + IF + + + +G + +++ ++ I + G + Sbjct: 34 RIFKDGTNIFFEGEEGDRVYFLKKGRVKVKKTSPDGGEQILEIITPGDVFGEVVLFGIDR 93 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQL--WRDAFYWLAWQNRILELRDVQLIGHNSY 139 P ++ G +L + N W +A + + R L ++ Sbjct: 94 YPATTVAIGEVVVDYLSRSKFRRYFTNNPEIGWGML-KVMARKLARSQKRIENLGLRDTK 152 Query: 140 EQIRATLLSMIDWNEELRSRIGVMNY----IHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 ++ ++ M+ E +++ +++ + SR V+ L+ + G I++ Sbjct: 153 GRVATLIMDMMRDFGEKNNQVVKLHFNRQELANFIGTSRETVSRTLSEFKSEGLIDIKGK 212 Query: 196 KLVA 199 KL+ Sbjct: 213 KLII 216 >UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TI91_HELMI Length = 235 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 11/185 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKND 81 +Q + + + + EG + L + ++ I I G Sbjct: 37 RVLKRRQPLLQEGEPADAVYFLHEGKVRLAKMNPDGQEKVLSIVDPGDIFGEIVAFDPGP 96 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 PY + LP K+ L+ + L A + R L +++ Sbjct: 97 SPYTAETMEPARVSRLPLKEFRQLVSDHPSLAAACLQVEARRLRQAYRHMKNLALLDTHG 156 Query: 141 QIRATLLSMIDW---NEELRSRI---GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ A L + + +RI + Q SR V+ +LA + +E+ + Sbjct: 157 RVAARLFKLAHDYGVPDSRGTRIDFNLTRQELAQIVGTSRETVSRILAEYERLKILEVER 216 Query: 195 GKLVA 199 ++V Sbjct: 217 QQIVI 221 >UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XZU1_9GAMM Length = 222 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 74/194 (38%), Gaps = 6/194 (3%) Query: 13 KLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAP 68 KL L +G + Q +F ++ +V+L GV+ + + ++ A Sbjct: 21 KLKMFLLAHGKVLTLKAQ-QALFLRGDAHDGIYVVLSGVMRISGVNSNGKEAVLSFIDAS 79 Query: 69 YIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILE 127 G K + + ++ + +++P + L+ ++ W++ LA + R++ Sbjct: 80 LWFGEVTLFDKGLRTHDVYAQTDAQLFYVPQRSLEQLLSKHPEYWQEFGLLLAQKLRLMF 139 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 H++ +++ LL + + + T ++R + ++L L K Sbjct: 140 SSMEDHALHSAEQKVCNRLLMLSEQTNFSAPLALSQQQLADMTYLTRQTINQILQKLVKK 199 Query: 188 GYIEMNKGKLVAIN 201 I + + ++ Sbjct: 200 NAISLGYQCITVLD 213 >UniRef50_C1MAT1 Predicted protein n=2 Tax=Citrobacter RepID=C1MAT1_9ENTR Length = 201 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 4/174 (2%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGI-TQAPYIMGLADGLMKNDIP 83 ++Q I + +G +S+ R EN L+ + AP I+GL + Sbjct: 25 LSLRKKRQRIDLKTD--GQILFLEKGTVSVYRVENDLVTVSISAPAILGLP-QMRTEVAG 81 Query: 84 YKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + L + +C + + + L LW+ AF L + R+ EQI Sbjct: 82 HYLRCDTDCEMWAMSVQNADHLFTTKNLWKQAFDILTHHLQRYFQREALQSHRTIREQII 141 Query: 144 ATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 + + E+R + V +I R ISRS + +VL L G I +N+GKL Sbjct: 142 EHVKYIWSMEPEVREKTSVYTFILTRNHISRSAIHKVLQELVNDGKITLNRGKL 195 >UniRef50_C4XB37 Putative uncharacterized protein n=2 Tax=Klebsiella RepID=C4XB37_KLEPN Length = 211 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 6/174 (3%) Query: 39 VNNEDTFVILEGVISLRREENVL-IGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHL 97 + EG +S+ +N L IG + +GL + ++ G T + Sbjct: 39 PETGYIYFCTEGSLSILMPDNGLSIGNSIEHMPIGLMERYCP-LAKFEYTGSGPVTLRKI 97 Query: 98 PAKQTITLIEQNQLW--RDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLL-SMIDWNE 154 L +N L + + + SY+ IR L + + Sbjct: 98 TYAAFDRLFIENHPQRVEALAKVLVFMSIFTIDLHNERRQVTSYQTIRPMLYRYLYRQHT 157 Query: 155 ELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR-LPSEY 207 G+ +I +RT +SR+ V VLA L+ GGYI M +GKL++I+R LP+EY Sbjct: 158 HEGENEGLALFIIRRTNLSRTHVFRVLADLKAGGYITMKRGKLISIDRPLPAEY 211 >UniRef50_Q1ASB9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASB9_RUBXD Length = 250 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 71/204 (34%), Gaps = 14/204 (6%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE------ENVLIGIT 65 + L+ E + + + + + EG + L R + ++G+ Sbjct: 41 EGFFQALALAAEVLEIGAGTPL-YREGEPSGAVYFVREGRVKLFRSFSGRKPRDQILGVL 99 Query: 66 QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNR 124 ++GL L + + +C Y + ++ + LA + R Sbjct: 100 GDGAVLGLDAALEGRPQSHGATALTDCALYAVFRDDLTGIMCRFPEASLRLSRALASRIR 159 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVM------NYIHQRTRISRSVVA 178 LE L+ H++ +++ LL + + + V + + T ISR ++ Sbjct: 160 ELEDLVSDLVFHSAPQRVARMLLRLATEEGRVTKQGVVFEPSLSRQEMAEATGISREALS 219 Query: 179 EVLAALRKGGYIEMNKGKLVAINR 202 L+ L + G +++ + + Sbjct: 220 RALSRLAQEGILDLEGRTITILKP 243 >UniRef50_A2RDI8 Crp family regulatory protein n=26 Tax=Streptococcus RepID=A2RDI8_STRPG Length = 226 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 71/187 (37%), Gaps = 10/187 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKN 80 F + ++F + F++ G + + + + + I + Sbjct: 33 FRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDD 92 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNRILELRDVQLIGHNSY 139 + +++ + T ++ P +N+L + + ++ + ELR LI ++ Sbjct: 93 YYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSAS 152 Query: 140 EQI----RATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 ++ L+ M ++ L ++ + I Q + +R V+ VL L+K I + Sbjct: 153 SRVIQSLAILLVEMGKDSDTLPFQLTTTD-IAQISGTTRETVSHVLRDLKKQELITIKGK 211 Query: 196 KLVAINR 202 L +++ Sbjct: 212 YLTYLDK 218 >UniRef50_C0ZDT8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDT8_BREBN Length = 215 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 7/187 (3%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIM 71 + L YGTR +F K I+ ++ E + + +G++ + + ++ L+ I IM Sbjct: 12 ETLLEYGTR-QFVKGKTAIYKQEMIGEGFYYLHKGLVKIVTSTFKGKDRLVNIVVPGQIM 70 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDV 131 GL L + I+ N YH Q + +++ F Q + L + Sbjct: 71 GL-QTLDQQPHFTTAIAVKNAVVYHFSCLQFLEMLKARPELLSLFTQTINQKMRILLAAI 129 Query: 132 QLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 + S EQI LL++ + + + + + ++R V ++L A ++ G IE Sbjct: 130 NMKALTSEEQIARLLLNICEDFKNHEVPL-TQQELAECAGLTRITVYKILKAWKEQGIIE 188 Query: 192 MNKGKLV 198 + V Sbjct: 189 IKNRSFV 195 >UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ03_9PROT Length = 241 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 7/184 (3%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKND 81 I + + + +V++ G + + ++ + G + + Sbjct: 41 RRVPRLTTIVRAGDSTDSLYVLISGGAKVLNSDEEGREVILTLLGPGEFFGEMGLIDGSP 100 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 +++ C + + +N L + L + R + L + Y Sbjct: 101 RSADVVATETCELLVITKNDFKRCLAENFDLCLNIMKSLVQRLREADRNIESLALLDVYG 160 Query: 141 QIRATLLSMIDWNEELR--SRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLV 198 ++ L+ + R R I + SR +V+ V+ L GY + +G++V Sbjct: 161 RVAKLLIDFSEDERGQRVIRRRLTKQDIAKMIGASREMVSRVMKDLENRGYFRVEEGRIV 220 Query: 199 AINR 202 I + Sbjct: 221 IIEK 224 >UniRef50_B1G1H4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1H4_9BURK Length = 254 Score = 118 bits (297), Expect = 9e-26, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 77/209 (36%), Gaps = 28/209 (13%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQ 66 ++ S + T + VI+ D ++E +++ G + L R + + + + Sbjct: 18 LDEVMPAFSDHRTL----RKNAVIYRPDESSEHVYLLKSGSVRLYRLTEDGQEITLAFVK 73 Query: 67 APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRIL 126 A I G D L + + + + ++ L+ + D +N L Sbjct: 74 AGMIFGDGDVLNEENYSHHAQALTPSMVCYIRKADFKELLARY----DVINQFVLRNHYL 129 Query: 127 ELRD-VQLIGHNSYEQIRATLLSM----------IDWNEELRSRI-----GVMNYIHQRT 170 ++ QLI + S +R L+++ + E I + + + Sbjct: 130 RWQEAQQLIENLSLHDVRKRLVNILVMFAGQVGAAHEHPEHGDTILIDLPIAQDKLAEFI 189 Query: 171 RISRSVVAEVLAALRKGGYIEMNKGKLVA 199 SR V + L+ G+++M++ K+V Sbjct: 190 GTSRESVNRHFSDLKAEGFVDMHERKIVL 218 >UniRef50_A4IT53 Putative uncharacterized protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4IT53_GEOTN Length = 211 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 76/192 (39%), Gaps = 8/192 (4%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYIM 71 + YG R +F + VI++ ++ + + +G++ + + + L+ I +M Sbjct: 12 ESFLHYGKR-QFVKSRTVIYNQGSIDDGFYYLHKGLVKIVTTTPKGRDRLLNIVVPGQLM 70 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDV 131 G+ + I+ N YH +Q L+ + Q + LR + Sbjct: 71 GI-QIMDGQIHFTTAIAVRNSVIYHFSREQFAKLLMEYPDILTLMIQTLNQKMQILLRTI 129 Query: 132 QLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 + +S EQI LL++ D + + T ++R V ++L ++ G IE Sbjct: 130 NMKAFSSEEQIAFLLLNICDEFKNH-EAPLTQQDLAHCTGLTRITVYKILKKWKEEGIIE 188 Query: 192 MNKGKLVAINRL 203 + K I RL Sbjct: 189 IQNRKF-LIKRL 199 >UniRef50_B3PG67 Cyclic AMP receptor protein n=2 Tax=Gammaproteobacteria RepID=B3PG67_CELJU Length = 232 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 62/191 (32%), Gaps = 5/191 (2%) Query: 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGL 77 + + V+ + + ++I +G++S + + G + Sbjct: 42 SSVLRRFPKNTVLVTEGDESTHLYIIRKGIVSAFLNNDEGRQVNLNYMHEGEYFGELSLI 101 Query: 78 MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILELRDVQLIGH 136 +++ +C + L+ + + L + R L L Sbjct: 102 DSQPRSASVVTITDCEIILVSRASVHELLGKYPDFAMVLLKELTRRVRGLTDAVKDLALL 161 Query: 137 NSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 + Y ++ + L + D N+ + + I SR +V+ ++ L G YI G Sbjct: 162 DVYGRVSSALEKLCDDNKRIHNPKVTHQDIANMVGSSREMVSRIMKQLLIGEYIVQCSGY 221 Query: 197 LVAINRLPSEY 207 + LP + Sbjct: 222 IEIKKPLPRYW 232 >UniRef50_Q9K5F3 Crp/Fnr family protein n=2 Tax=Bacillus licheniformis RepID=Q9K5F3_BACLI Length = 225 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 13/189 (6%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPYK 85 + Q++F D E +++L+G I L + + + Y Sbjct: 38 KGQILFMEDDPRERMYLLLDGFIKLEKSNEAGSMFYTDYVRPHTLFPFGGLFRDEHYHYA 97 Query: 86 LISEGNCTGYHLPAKQTITLI-EQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRA 144 + + Y++P L+ + L D L+ + E R ++ ++++++ Sbjct: 98 AEALTDIELYYIPMNIFEDLVRDNKNLLYDILNHLSDILALHEERLKRITLSHAHDRVTQ 157 Query: 145 TLLSMIDWNEELRSRIGVMN------YIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLV 198 + + + + S V+N I + + SR V+ VL LR G I K + Sbjct: 158 AIYYLTESLGQKESNSTVINCPITAAEIAKISGTSRETVSAVLKKLRCEGVISQMN-KQI 216 Query: 199 AINRLPSEY 207 INR P + Sbjct: 217 MINR-PEYF 224 >UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHX8_THEYD Length = 222 Score = 115 bits (289), Expect = 7e-25, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 70/182 (38%), Gaps = 11/182 (6%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDIPY 84 +++ IF+ + V+++G I + + + +++ + AP G L P Sbjct: 29 KKRETIFNEGDIPQWFHVLIKGKIKISKFSNNGKEIILELLDAPDFFGTLALLKNIPYPA 88 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 I+ +C ++P+K + ++ + L + + + + + + + +I Sbjct: 89 SAIAIDDCDIGNIPSKTFLQIVNKYPELQSEILHHVTMRLKSGIESLKNIALVDVLSRIV 148 Query: 144 ATLLSMIDWNEE------LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 +L + + + L I + + + +++ L+K GYI K+ Sbjct: 149 YQILKLANKYGKKVSEGILIDLKLTKQEIAEMSGTTTETAIRIMSKLKKEGYITEQNRKI 208 Query: 198 VA 199 + Sbjct: 209 II 210 >UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCU2_9BURK Length = 238 Score = 114 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 71/199 (35%), Gaps = 16/199 (8%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL--RREENV-----LIGITQAPYI 70 L +++ F D + ++ G I + E ++ + P Sbjct: 32 LLDMARVRHLQAGEKL-FLRDAAPCGLYAVVRGTIRISGHSGEGDGAREAVLVLLSPPQW 90 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRILELR 129 G + + + CT H+P ++ + + Q+ WRD +A + R+ + Sbjct: 91 FGEISVFDGSARTHDAHAAEPCTLLHIPHEELLAWLTQHPAHWRDLAVLMADKLRLAFVS 150 Query: 130 DVQLIGHNSYEQIRATLLSMI-------DWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 + + +++ LL+M + + LR + + +SR ++L Sbjct: 151 MEEQTVLPAPQRLARRLLTMALSYGQATESDRTLRVLVVTQEQLALMIGVSRQTTNQILR 210 Query: 183 ALRKGGYIEMNKGKLVAIN 201 + G + + +G + ++ Sbjct: 211 DFKARGVLHVQRGCIELLD 229 >UniRef50_D2TRD7 Putative uncharacterized protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TRD7_CITRO Length = 231 Score = 114 bits (286), Expect = 2e-24, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 9/191 (4%) Query: 12 GKLDKCLSRYGTRFE---FNNEKQVIFSSDVNNEDTFVILEGVISLR---REENVLIGIT 65 K+ LS + T + K+ S ++ F ILEG L+ + E ++ I Sbjct: 34 DKIITSLSEHSTLAQPDSIIRGKRRYNLSHEHSRRIFFILEGDFLLKMRVKNEEKMLNIL 93 Query: 66 QAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRI 125 APY++ + L +P L + L + L+ + L D L+ Sbjct: 94 SAPYVVDVTPALD--ALPLYLERVDYGRVHSLSYDRFWQLVREKDLLDDTMSILSGHYSD 151 Query: 126 LELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALR 185 L + +SYEQ+ + + L+ R + I + +SRS + VL L+ Sbjct: 152 LL-NYITTSKSSSYEQVISLIERWQRLPSHLKKRFSALYLIENSSWLSRSSICRVLKELK 210 Query: 186 KGGYIEMNKGK 196 G ++++ G+ Sbjct: 211 DRGELKLDNGR 221 >UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A710_NATTJ Length = 243 Score = 114 bits (286), Expect = 2e-24, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 64/181 (35%), Gaps = 12/181 (6%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPY 84 VIF E + + +G + + +++ ++ I + I P Sbjct: 49 PGGSVIFYHGDPGEAMYYVKDGKVKIVKDDFDGREQILHIMKPGDIFAEVVVFDDGPYPA 108 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + + ++ + ++ + + + R + + L ++Y++ Sbjct: 109 TAEVMEDTVVGVITKERLENHLHEHPTIAIKIMKLMGKRLRKAQSKVADLALRDTYQRTI 168 Query: 144 ATLLSMIDWNE----ELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 + ++++ ++ + I + SR V VL+ L+K G I+ +KG Sbjct: 169 NIIYNLMEEDDCAFCSEKQEIAITATHQELASMAGTSRETVTRVLSTLKKEGIIKTDKGY 228 Query: 197 L 197 + Sbjct: 229 I 229 >UniRef50_C6DJ46 Putative uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DJ46_PECCP Length = 203 Score = 112 bits (281), Expect = 6e-24, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 79/202 (39%), Gaps = 3/202 (1%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE-EN 59 M + + K+ S T + K++ F + + + EG +++ ++ Sbjct: 1 MKELNTSIFRITKILSPHSNIATPTKVIKGKRLYFFYPSGEQVIYFLDEGTFLMKQSIDD 60 Query: 60 VLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL 119 +I + +P I+G + + Y L +P + +I + + D + Sbjct: 61 KVISVILSPAIVGWSMVTLDGGELY-LERVDYGKIRSIPFNTAMRIITAYERFDDVLTIV 119 Query: 120 AWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAE 179 L + G +S + L S+ +++ R ++YI QRT +S+S + Sbjct: 120 NTGFHALIDHCIGNHG-DSLSIVHKMLRSLNQLPPDVKLRFSALSYISQRTSLSKSTIKR 178 Query: 180 VLAALRKGGYIEMNKGKLVAIN 201 L L++ G + + GKL + Sbjct: 179 GLKQLQQQGLLTLEHGKLRHLT 200 >UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFA6_9FIRM Length = 229 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 68/187 (36%), Gaps = 11/187 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKND 81 + V+F E FVI +G + + + ++ + + I + Sbjct: 35 RSYAKGSVLFMEGEQGEALFVIRQGRVKISKSTADGREQILHMLKDGDIFAEVVLFDRGP 94 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSYE 140 P + + + L + L++ + L ++ + R +L L H++Y Sbjct: 95 YPATAEAVEDTQCWLLRSADMEKLMQSHPLLAIKLLRVMSKRLRQAQLLVRDLALHDAYG 154 Query: 141 QIRATLLSMIDWNEELRSRIGVM------NYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ LL + V+ + SR VA +L+ +K G + ++K Sbjct: 155 RMAGLLLRFARREGKQTKDGIVLELDLTRQEMASMIGTSRETVARILSRFQKDGVLTLDK 214 Query: 195 GKLVAIN 201 ++V ++ Sbjct: 215 QRIVLLD 221 >UniRef50_C4KZ85 Transcriptional regulator, Crp/Fnr family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KZ85_EXISA Length = 229 Score = 109 bits (274), Expect = 5e-23, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 24/213 (11%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIG----I 64 + +L + + Q++F E + ++ G I L R Sbjct: 22 RALEQLVPHVYC-----RTYRKGQLLFMEGDPRERVYFLMSGYIRLERMNEHATHQYADY 76 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNR 124 + + D + + + ++P ++ + Y + NR Sbjct: 77 VKPKQFFPYNGLFTEEDYRHTAEAVTDIDVIYIPTERFERFVSTQS--NMLLYIIGQMNR 134 Query: 125 IL---ELRDVQLIGHNSYEQIRAT---LLSMIDWNEE----LRSRIGVMNYIHQRTRISR 174 IL E R ++I ++ E++ T L+ + +E +R M + + + SR Sbjct: 135 ILDLHERRVQEIITPSAKERVLNTIHFLIEDLGEPDEQGVRVRCPFTAM-ELSRLSGTSR 193 Query: 175 SVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY 207 V+ +LA LRK + M+ +LV + P + Sbjct: 194 ETVSTILAKLRKEEVLRMDDHQLVIGH--PEYF 224 >UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein) (CAMP-regulatory protein) n=4 Tax=Rhodocyclaceae RepID=Q5NXU3_AZOSE Length = 223 Score = 109 bits (273), Expect = 6e-23, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 10/197 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYI 70 +SR + V+ + + +++L G + + + ++ I + Sbjct: 26 LATVSRLAMMRRIPRGQSVVHA-GERCDFVYLVLTGSLKVVVSDEDGREVILTILGQGEL 84 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ--LWRDAFYWLAWQNRILEL 128 G + +++ + T+++ N WR LA + R + Sbjct: 85 FGEMSMFGEQPRSATVVAVMPSDLVMIAKNDFRTILQGNFEVAWRIMAN-LADRLRSADR 143 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEE--LRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 + L + Y ++ LL M + + R I + SR +V+ V+ L Sbjct: 144 KIESLALMDVYGRVARLLLEMSEEVNGAVVVVRKITKQDIAKMIGASREMVSRVMKDLAA 203 Query: 187 GGYIEMNKGKLVAINRL 203 G IE +V +RL Sbjct: 204 QGLIEETGAGIVLRDRL 220 >UniRef50_Q1IRK0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRK0_ACIBL Length = 239 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 63/189 (33%), Gaps = 13/189 (6%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVIS--LRREEN--VLIGITQAPYIMGLADGLMKND 81 + V+F FV+ +G + + + +++ I + ++GL+ + Sbjct: 42 TAYPKSAVLFVEGQAPRGIFVLCKGRVKLSICSTDGKTLILKIAEPGEVLGLSATVSGKT 101 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQN--QLWRDAFYWLAWQNRILELRDVQLIGHNSY 139 + C + + + ++++ +R A N + H++ Sbjct: 102 YELTAETIDPCQVNFVKREDFLRFLKEHADACFRVAEQLSEKYNTACREIRSLGLSHSAA 161 Query: 140 EQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLAALRKGGYIEMN 193 E++ LL E I Q SR V + A L+K I ++ Sbjct: 162 EKLAKLLLEWSARAGESNKSEPRVRLALTHEEIAQMIGTSRETVTRLFAELKKR-QIVLS 220 Query: 194 KGKLVAINR 202 +G + + Sbjct: 221 RGATLVVKN 229 >UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PAL9_CHIPD Length = 352 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 59/186 (31%), Gaps = 15/186 (8%) Query: 28 NNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIP 83 +KQ+I+ + I +G + + N + + A +G L ++ Sbjct: 161 YKKKQLIYQEGNRPTSLYFIQKGRVKTYKVNNDGKELAVNLYSAGEFLGYVALLEGSNYH 220 Query: 84 YKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + C +P + TLI N R+ Q + H +Y +R Sbjct: 221 ENAEALEACELTAIPREDFETLINNN---REVAQQFIRLLAKNITEKEQQLLHLAYSSLR 277 Query: 144 ATLLSMIDWNEELRSRIGVMNY--------IHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 + + + ++ + + + + + L R +E+ +G Sbjct: 278 KKVAEALLFLKKKYHHVTDQPFSIDISRENLATIAGTATESMIRTLGDFRDEKLLEIKQG 337 Query: 196 KLVAIN 201 + +N Sbjct: 338 VITILN 343 >UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus RepID=A9WEN3_CHLAA Length = 239 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 13/199 (6%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR--EENVLIG--ITQAPYIMGL 73 L + V FS + E F++ EG + + R + ++ I I G Sbjct: 34 LLGKRAPMQRVPAGTVFFSPEQRAEVLFILKEGRVRIYRLSTDGKMLTTAILNEGTIFGE 93 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQ 132 L + + + C + + L+ + + L + E R Sbjct: 94 MALLGQQLHQHYAEALTPCLLCLMSREDVKRLLLSDPRIATRIVEILGQRLISAEQRLSD 153 Query: 133 LIGHNSYEQIRATLLSMID--WNEELRSRIG------VMNYIHQRTRISRSVVAEVLAAL 184 + ++I LL M R + + R ++L L Sbjct: 154 FAFKSLPQRIATLLLQMAQPAKPRLFRPGSSQREVALTHEALAEMLGTYRETTTKILNDL 213 Query: 185 RKGGYIEMNKGKLVAINRL 203 R G IE+ +G++V ++ + Sbjct: 214 RTQGLIELRRGRIVLLDEI 232 >UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicobacter RepID=C3XLC9_9HELI Length = 202 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 61/183 (33%), Gaps = 14/183 (7%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRRE---------ENVLIGITQAPYIMGLADG 76 F N+ +++F N + F++L G + + + + +P + Sbjct: 24 RFFNKDEILFFEGENPKKLFILLNGKVRIYKSIQPIKDIAPREKTLHYITSPSFLAEMPS 83 Query: 77 LMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGH 136 L+K P I +C + + +N L LI Sbjct: 84 LLKQPFPASAICTEDCEVLEISLEAFQKQCTENP---HFCQQLIASLCQKIRILETLI-M 139 Query: 137 NSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 S+ ++ L+S + N + I + S ++ + L+ G IE KGK Sbjct: 140 ESHLSLKDKLMSFLQENTQ-NLNTLTQREIAKHLNTSPESLSRTIRELKTQGRIETKKGK 198 Query: 197 LVA 199 ++ Sbjct: 199 IIL 201 >UniRef50_A9BMG5 Transcriptional regulator, Crp/Fnr family n=7 Tax=cellular organisms RepID=A9BMG5_DELAS Length = 278 Score = 106 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 68/204 (33%), Gaps = 20/204 (9%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL-------RREENVLIGITQAPYI 70 L + F + + G +S+ + L+ + + P Sbjct: 65 LKALAQPRTLAAGDWL-FRRGDPPCGLYAVARGALSISGTAACGEQARTALLTLVEPPMW 123 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRILELR 129 +G + + + CT H+P + + W+ L + R+ + Sbjct: 124 LGEIALFDGAERTHDAQAATACTVLHVPQAPLQAWLAAHPEHWQVLALLLTDKLRVCLMA 183 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEE-----------LRSRIGVMNYIHQRTRISRSVVA 178 + + +++ L+ M + ++ R + + +SR Sbjct: 184 LEEHTLLPAPQRLARRLVRMAEGFDQWQPDGQGRQRWRRELDVSQEQLARMLGLSRQTTN 243 Query: 179 EVLAALRKGGYIEMNKGKLVAINR 202 ++L L++ G +++ +GK+ ++R Sbjct: 244 QILQELQQAGCLQLRRGKMEVLDR 267 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 106 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 68/187 (36%), Gaps = 10/187 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKN 80 E N+ VIF F I +G++ + + +I + + ++G L + Sbjct: 37 VESYNKGDVIFKEGAVPSGIFYIQKGMVKKYKVDRDGREQIIHVASSGELIGYHAILAEE 96 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSY 139 P + C+ +P + + ++ + L + L+ + +L + + Sbjct: 97 RYPDSASTIEACSIAFIPKEDFLEVLGSSSILSQRLLKNLSHEFAVLTNNMSAMTQRTAR 156 Query: 140 EQIRATLLSMIDWNEELRSRIGVMNYIHQ-----RTRISRSVVAEVLAALRKGGYIEMNK 194 E++ TL+ + + + + + I + I++ + +L + ++ Sbjct: 157 EKVAITLIVLREKYKSMEDNENGIINISRSDLSNMAGIAKENLVRILKEFKNNNILQTEG 216 Query: 195 GKLVAIN 201 K+ + Sbjct: 217 RKITIND 223 >UniRef50_Q07HN5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07HN5_RHOP5 Length = 234 Score = 105 bits (263), Expect = 9e-22, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 68/190 (35%), Gaps = 6/190 (3%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGL 73 L+ + + IF F + GV+ + +++ + + I G Sbjct: 36 LAAHAKIKDVPRGTT-IFMKGAAGTCLFAVCRGVVLVTNTSSDGKSLFLNEIKEGEIFGE 94 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQ 132 L + +C+ + + + L+ N + L + R + Sbjct: 95 IALLDGQPRTADAAAFTDCSLIVIERRDFLPLLRSNPDVMLKLVEILCSRLRRTTEQVED 154 Query: 133 LIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEM 192 L+ + ++ TLL + + R+ N + Q +SR ++ + L + GY+++ Sbjct: 155 LMFMDLRGRLAKTLLRLSQSAGDDRTLDISQNELSQMVGLSREMINKQLQVWVREGYLKI 214 Query: 193 NKGKLVAINR 202 + +L+ + Sbjct: 215 ERRRLIILQP 224 >UniRef50_Q67K68 Putative cyclic nucleotide-binding transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K68_SYMTH Length = 223 Score = 103 bits (257), Expect = 4e-21, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 6/178 (3%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLM 78 R + ++F+ E + I +G + + R + ++ + + +GL Sbjct: 28 ARERHYRKGTILFNEGDPGEAIYFIKKGRVRVSRLAANGQEQVLRVWGPGHEVGLVVLAD 87 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 K P + + L+ +++ L +AF + + R+ +L HN Sbjct: 88 KAPYPATAQVTEDSVLIAFRVDDLVQLLPESRTLAANAFCLVGRRLRLARDTAHELAVHN 147 Query: 138 SYEQIRATLLSM-IDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ ++ A LL M + ++ + I SR V VL R+ G I + Sbjct: 148 THGRLAALLLRMKAEQGSDVINLGMTHQEIAGMIGTSRETVTRVLGDFRRTGCIAVQG 205 >UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Tax=Clostridia RepID=A4J2D4_DESRM Length = 227 Score = 102 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 71/188 (37%), Gaps = 11/188 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKND 81 + ++IF E +V+ G+I L + ++ + D Sbjct: 32 RSYQKGRIIFMEGEPGEALYVLKSGLIKLTKRLEDGREHILHFVNPGEVFAEVVLFEGGD 91 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 P + +C L + LI QN + ++ + R + + + L H++ Sbjct: 92 YPATAEVQEDCIVGVLRNQDIERLISQNPNMAVSMLRIMSRRLRTAQEKVMNLALHDTAR 151 Query: 141 QIRATLLSMIDWN-----EELRSRIG-VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ TLL M + + + I + T SR + +L + ++ G I++++ Sbjct: 152 RLSFTLLKMSQEHGIQKNDGILININLTNQELASLTGSSRETINRMLNSFKRAGAIDVDR 211 Query: 195 GKLVAINR 202 ++ ++R Sbjct: 212 QQITVLDR 219 >UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NPI1_ROSCS Length = 223 Score = 102 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 64/194 (32%), Gaps = 10/194 (5%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIM 71 L+ R +++F + + +V+L G + L R +I I + + Sbjct: 23 AALASIAVRVRHTAG-EMLFLAGDPSPGLYVLLSGRVRLSRLSPGGREQVIHIVEPGHHF 81 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAW---QNRILEL 128 P ++ + P + LI ++ + A LA R L Sbjct: 82 NSVPVFDGGPCPVNAAAQTDIIALLFPGDRLRALILEHPV--VALRLLADSCGYLRRLVD 139 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGG 188 L ++ LL+ + E + + I R R +V L G Sbjct: 140 LVDDLALTTVQGRLARLLLTQAEAGERGVVQPLTQSEIAARLGTVREMVGRSLKTFEAMG 199 Query: 189 YIEMNKGKLVAINR 202 I + +G ++ I+R Sbjct: 200 LIRIERGTIIIIDR 213 >UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8Q5_OXAFO Length = 215 Score = 102 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 75/196 (38%), Gaps = 14/196 (7%) Query: 10 EFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR--EENVLIGITQ- 66 KL++ L + R ++ I ++ EG + + I I Sbjct: 18 SMEKLEEFLEKTPCRLAHYETREHIAMQGAPCRAFILLCEGQVRASMIGTDGRQITIEDH 77 Query: 67 -APYIMGLADGL-MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQN 123 AP ++ N P +I+ C + + + L+ + ++ L+ ++ Sbjct: 78 EAPMLLASNFVFATHNHFPVDIIAITPCEIMVIEKEPFMELMCTEPVVLQNFLRILSDRS 137 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA 183 IL + L+ +I A LL ++E+R++ V +Y+ ++R +A VLA Sbjct: 138 HILSRKLGSLVLLKLKNRIAAYLLE----HQEIRNQQEVADYL----GVARPSLARVLAE 189 Query: 184 LRKGGYIEMNKGKLVA 199 L + G + ++ Sbjct: 190 LAQEGSVLFENRRVTI 205 >UniRef50_O05689 Catabolite gene activator n=9 Tax=Gammaproteobacteria RepID=CRP_PASMU Length = 209 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 69/205 (33%), Gaps = 12/205 (5%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----V 60 ++ + + ++ ++ +I + E + +++G +++ ++ + Sbjct: 1 MQTTPSIDPTLEWFLSHCHIHKYPSKSTLIHA-GEKAETLYYLIKGSVAVLVKDEDGKEM 59 Query: 61 LIGITQAPYIMGLADGLMKND-IPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYW 118 ++ G A + + ++ C + K+ LI+ N + Sbjct: 60 ILTYLSQGDFFGEAGLFEEGQLRSAWIKAKSPCEIAEISYKKFRQLIQVNPDILMHLSAQ 119 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG-----VMNYIHQRTRIS 173 LA + + + L + +I TLL++ E + G I Q S Sbjct: 120 LARRLQNTSRQVSNLAFLDVTGRIAQTLLNLAKMPEAMTHPDGMQIKITRQEIGQMVGCS 179 Query: 174 RSVVAEVLAALRKGGYIEMNKGKLV 198 R V +L L I + +V Sbjct: 180 RETVGRILKMLEDQHLISAHGKTIV 204 >UniRef50_Q15QG5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QG5_PSEA6 Length = 230 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 63/207 (30%), Gaps = 16/207 (7%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLI 62 P +L + Q+++ + + ++ G + L + +++ Sbjct: 20 PQDAIEQLVTA----AKLKRLDTG-QLVYQKHDLGDGLYCVMSGKVRLSNVTLEGKELIL 74 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAW 121 Q G + ++ C + ++ L+ + L+ L Sbjct: 75 TWMQPGNWFGEISLFDGLPRAHDAYADEPCELLKISSQDFKALLIERPTLYPHFMRLLCQ 134 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRS 175 + R + + ++ +L + E + SR Sbjct: 135 RIRTTFSFIDETGSLSLKGKLCGRILLFAEGLEHQAPIENGSSLCISQESLALMLHSSRQ 194 Query: 176 VVAEVLAALRKGGYIEMNKGKLVAINR 202 V ++L L++ G I+++ GK+ + Sbjct: 195 TVNKLLQELQQQGVIKVHYGKITIVQH 221 >UniRef50_Q3K5V6 Cyclic AMP receptor protein,catabolite gene activator n=16 Tax=Gammaproteobacteria RepID=Q3K5V6_PSEPF Length = 214 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 70/208 (33%), Gaps = 16/208 (7%) Query: 5 VKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----V 60 + P + L L + R + +I + ++ + I+ G +++ E++ + Sbjct: 4 ITPTPKIKNL-DKLLMHCQRRRHAAKSNIICA-GDRSDTLYFIIRGSVTILIEDDDGREM 61 Query: 61 LIGITQAPYIMGLADGLMK----NDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDA 115 +I A G + + ++ C + + L +Q+ + Sbjct: 62 IIAYLNAGDFFGELGLFEEAGQEQQRSAWVRAKVECEVAEISYAKFRELSQQDPDILYVL 121 Query: 116 FYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG-----VMNYIHQRT 170 +A + R + L + ++ LL + + + G I + Sbjct: 122 SGQIAQRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKVTRQEIGRIV 181 Query: 171 RISRSVVAEVLAALRKGGYIEMNKGKLV 198 SR +V VL L + +++ +V Sbjct: 182 GCSREMVGRVLKDLEERNLVDVKGKTMV 209 >UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Proteobacteria RepID=Q2T0J6_BURTA Length = 266 Score = 99 bits (248), Expect = 5e-20, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 75/202 (37%), Gaps = 12/202 (5%) Query: 13 KLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAP 68 +L L+ QV+F + +L G +S+ + L+ + + Sbjct: 24 ELRDALAATAVPRRLAAG-QVLFRRGDAPCGLYAVLSGALSVGAVDASGKEALLTVAEPM 82 Query: 69 YIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILE 127 G + + I+ + H+P L+++ WR +A + R+ Sbjct: 83 TWFGEIALFDELPRTHDAIALEDALLMHVPQAALQQLLDETPRYWRYLALLMAQKLRMSF 142 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTR----ISRSVVAEVLAA 183 + L + +++ A LL + + + +R + +R +SR ++L Sbjct: 143 MNVEALTLMPAAQRLAARLLMIAEGYGGISTRHRRIRLSQERLGAMLSLSRQTANQLLKE 202 Query: 184 LRKGGYIEMNKG--KLVAINRL 203 L G + ++ G ++V +N L Sbjct: 203 LAARGVVRLHVGEIEIVDLNAL 224 >UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTE5_DYAFD Length = 354 Score = 99.6 bits (247), Expect = 6e-20, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 65/187 (34%), Gaps = 9/187 (4%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLM 78 + + +K+ I++ F + +G + + + + + G D L Sbjct: 158 KKVKILRKKETIYTEGSFPSHVFFLQKGKVKAYKSNENGKEYITDLLKEGEFFGYLDLLH 217 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIE-QNQLWRDAFYWLAWQNRILELRDVQLIGHN 137 I+ +P L++ ++ L+ + + E R +QL ++ Sbjct: 218 GAPYEETAIALEKSEVAMIPKDDFFNLLQGNREVASKFIRMLSNEIKEREERLLQLAYNS 277 Query: 138 SYEQIRATLLSMIDWNEELRSRI----GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMN 193 +++ L+ ++ +E RS+ I + V L+ ++ ++M Sbjct: 278 VRKRVAQALVMLVQRYQEDRSKPFSMAVTREDIASMVGTATETVIRTLSDFKEERLVDMK 337 Query: 194 KGKLVAI 200 ++ + Sbjct: 338 GSQITVL 344 >UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidetes RepID=C6XZK0_PEDHD Length = 352 Score = 98.8 bits (245), Expect = 9e-20, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLM 78 + +KQVI+ + +++L G + + +L G+ A G+ L Sbjct: 158 RKVRNVKKKQVIYYEGDAVQGIYLVLTGKVKTIKLSEDGRELLTGLYNAEEYFGIPALLG 217 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 + + T LP + L+ + + ++ L+ R E + +QL H+ Sbjct: 218 HEPYAETAEALEDTTVCLLPKEMVEALLNKYPDVAKEFIRILSNNLRSKEEQLLQLAYHS 277 Query: 138 SYEQIRATLLSMIDWNEE---LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 +++ L+ + + L +I + + ++ V+ +L+ R G IE Sbjct: 278 VRKRMAEVLIRLCKQEKSGAVLNLKIS-RDNLAAMAGMATETVSRILSDFRDEGLIEKKG 336 Query: 195 GKLVAINRL 203 +++ + L Sbjct: 337 SQIIVTDEL 345 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 98.4 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 65/185 (35%), Gaps = 11/185 (5%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKNDIPY 84 + Q+++ F I GV+ + + + ++ + + +G + L + + Sbjct: 23 RKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILHLAKEGDFLGYSALLGEENYSN 82 Query: 85 KLISEGNCTGYHLPAKQTI-TLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + + +P + + TL ++ L+ + I+E + + E++ Sbjct: 83 SAMIVEDAKICFIPKETFLATLFNNTPFFKRITKALSHELGIMEEKLTDATQKSIRERLA 142 Query: 144 ATLLSMIDW------NEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 +L + + + I + V +L+ +K IE+ ++ Sbjct: 143 FVILQLASSYGVDGGETQKIDLVLSREEIAGMVGTATESVIRLLSEFKKDNLIELEGKRI 202 Query: 198 VAINR 202 + ++ Sbjct: 203 IVKDK 207 >UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Actinomycetales RepID=A9WTJ5_RENSM Length = 270 Score = 98.4 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 57/186 (30%), Gaps = 13/186 (6%) Query: 34 IFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKNDIPYKLISE 89 +F + + I+ G + L R L+ I + G + + Sbjct: 83 VFHEGDQGDQLYFIVSGKVKLGRTAPDGRESLLAILGPGELFGEMALFDPSPRTATATAV 142 Query: 90 GNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILELRDVQLIGHNSYEQIRATLLS 148 L + L++ + LA + R L+ + ++ L+ Sbjct: 143 SETRLAGLRNESLRALLQTSPEVSAQLLQALARRLRRTNDNLSDLVFSDVPGRVAKALID 202 Query: 149 MIDWNEE------LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKG--KLVAI 200 + + L + + Q SR V + LA + G++ + ++ I Sbjct: 203 LSERFGRPATDGVLVAHELTQEELAQLVGASRETVNKALAEFVQRGWLRLEARAVVILDI 262 Query: 201 NRLPSE 206 NRL Sbjct: 263 NRLRQR 268 >UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89HD2_BRAJA Length = 242 Score = 98.0 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 9/195 (4%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYI 70 L RY + + F ++ G + + N ++ + I Sbjct: 34 LDQLCRYAKHTTVKRGATIAAK-GDPGNNLFAVISGTVKISSSSPDGRNAILNLIGPGEI 92 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G L + NC Y + + + ++ L L + R + Sbjct: 93 FGEIAVLDGAPRSADATANTNCELYIIDRRDFLPFVKSQPALAMKFIELLCARLRWTSQQ 152 Query: 130 DVQLIGHNSYEQIRATLLSMIDW---NEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 Q+I N ++ + LL + + + + I + ++R + + L A Sbjct: 153 VEQVILQNLPGRLASALLGLTEERKFDSGSGTLAITQQEISEMVGMTRESINKQLRAWAG 212 Query: 187 GGYIEMNKGKLVAIN 201 ++ + G +V ++ Sbjct: 213 RNWVRLEHGAIVVLD 227 >UniRef50_B7IVS0 Transcriptional regulator, Crp family n=49 Tax=Bacillales RepID=B7IVS0_BACC2 Length = 229 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 13/193 (6%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRR--EENVLI--GITQAPYIMGLADGLMKND 81 + Q +F + E + +L+G + L R + L+ + I Sbjct: 34 RTYKKGQFLFLEGDSRERIYFMLDGFVKLERVNQNGNLLYDDYVKRYSIFPYGGMFTDRG 93 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILELRDVQLIGHNSYE 140 Y + + Y++P +++ ++ L+ ++ E R + N+ + Sbjct: 94 YNYTAEAMTDVEVYYIPTVIFEDMVKSSRTQLMYVVQQLSSILKLNENRVQNITIPNAQD 153 Query: 141 QIRATLLSMIDWN-EELRSRIG-----VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ TL ++ E+ +I I + + SR V+ VL L+ + + Sbjct: 154 RVIQTLNYLMQDLGEQSGEKIVISCPLTTIEISKISGTSRETVSSVLKQLKNDSIVTILD 213 Query: 195 GKLVAINRLPSEY 207 K+ N P+ + Sbjct: 214 KKITIHN--PTYF 224 >UniRef50_P0A2T7 Catabolite gene activator n=270 Tax=Gammaproteobacteria RepID=CRP_KLEAE Length = 210 Score = 97.6 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 12/192 (6%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGL 73 + ++ ++ +I E + I++G +++ + +++ +G Sbjct: 15 FLSHCHIHKYPSKSTLIH-QGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGE 73 Query: 74 ADGLMKND-IPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDV 131 + + ++ C + K+ LI+ N + +A + ++ + Sbjct: 74 LGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSSQMARRLQVTSEKVG 133 Query: 132 QLIGHNSYEQIRATLLSMIDWNEELRSRIG-----VMNYIHQRTRISRSVVAEVLAALRK 186 L + +I TLL++ + + G I Q SR V +L L Sbjct: 134 NLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLED 193 Query: 187 GGYIEMNKGKLV 198 I + +V Sbjct: 194 QNLISAHGKTIV 205 >UniRef50_C9Y9B1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9B1_9BURK Length = 248 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 11/189 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYI 70 L+ T+ + + V+ N+ F+IL G + + V++ +A Sbjct: 48 IDDLAANVTKRKIKKGEDVV-RQGHNSNALFLILSGRSHVVMTDSKGKEVILATLKAGDY 106 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELR 129 +G + + +E L + N + L + R + + Sbjct: 107 IGEMSLIDNEAHSATVQAETQMDVLVLGRDDFTRCVSNNAAIAGAVMRGLVQRLRTADQK 166 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEE----LRSRIGVMNYIHQRTRISRSVVAEVLAALR 185 V L Y ++ LL M + ++ +R ++ + + + SR +V+ V+ Sbjct: 167 IVSLALMGVYGRVANVLLDMAEPIDKGEMLIREKVSRSD-LSKMVGASREMVSRVMKDFE 225 Query: 186 KGGYIEMNK 194 G+I+ N Sbjct: 226 DQGFIKTNN 234 >UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF29_CARHZ Length = 213 Score = 96.9 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 61/179 (34%), Gaps = 13/179 (7%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPY 84 + Q++FS + + G I L +E+ ++ + I K P Sbjct: 34 KKGQILFSEGDPGAAVYFLKSGRIKLYKEDREGREHILHYVEPGDIFAEVVLFSKRPYPA 93 Query: 85 KLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 +P ++ L+++ ++ + L ++ + + +L +S ++ Sbjct: 94 TAEVIEPGEVLVIPNEEMENLLKKRGEIALNLIKVLLYRLDLANQKIKELALKDSLARVC 153 Query: 144 ATLLSMIDWNEELRSRIGV-MNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 + LL I + I +SR + ++ ++ G + L IN Sbjct: 154 SVLLR-------YGPVINLSQQEIANLAGVSRETASRIINEFKRLGVLRAEGRSLEIIN 205 >UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deltaproteobacteria RepID=A0LNW4_SYNFM Length = 228 Score = 96.9 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 54/180 (30%), Gaps = 7/180 (3%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDIPYK 85 + Q +FS +VI+ G I + + + ++ I A P Sbjct: 35 KGQTLFSEGAKATGFYVIVSGRIKIYKLSLEGKEQILHIFGAGEFFAEVPVFAGGAFPAH 94 Query: 86 LISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRA 144 + P I L+ L + L + R L ++ A Sbjct: 95 AEAIEASRVLFFPRAAFIELVRSEPSLALNMLAILCQRLRRFTHMVEDLSLKEVPGRLAA 154 Query: 145 TLLSMIDWNEELRSRI--GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 LL + + E + ++ +LA + + +I + ++ +NR Sbjct: 155 YLLYLGERAEGSDRLELDTTKGQLASLLGTIPETLSRILAKMSQQEFITVEGRRITILNR 214 >UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGI3_CHIPD Length = 248 Score = 96.5 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 11/188 (5%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLM 78 + + Q+IF + + I EG + +++ +I + A ++G L Sbjct: 48 AVAQNFRKGQIIFRENNPAFGIYYIKEGKVKKYKQDRNGNEHIIYVANAGELIGYHAILA 107 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHN 137 N P + +C +P + IE + L R L+ + +L + H+ Sbjct: 108 DNTYPDSAAALEDCMIAFIPRDAFLLAIESSANLSRHLLGALSHEYNVLSNSLSIVARHS 167 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVM------NYIHQRTRISRSVVAEVLAALRKGGYIE 191 + E++ +L+ + + + G + + T + V +L L+K + Sbjct: 168 AKERLAISLIVLREKYKSSEYDTGDICITISRKDLASMTATTEENVVRMLKELKKDNIVG 227 Query: 192 MNKGKLVA 199 K++ Sbjct: 228 TIGRKIII 235 >UniRef50_P29281 Catabolite gene activator n=65 Tax=Gammaproteobacteria RepID=CRP_HAEIN Length = 224 Score = 96.5 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 66/196 (33%), Gaps = 12/196 (6%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPY 69 + + ++ + +I + + + +++G + + +++ +++ A Sbjct: 25 VLDWFLTHCHLHKYPAKSTLIHA-GEDATTLYYVIKGSVMVSSKDDEGKEMILTYLGAGQ 83 Query: 70 IMGLADGLMKND-IPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFY-WLAWQNRILE 127 G A + + ++ C + K+ LI+ N LA + + Sbjct: 84 FFGEAGLFDEGSKRSAWVKTKTTCEIAEISYKKYRQLIQANPEILMFLTAQLARRLQNTS 143 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG-----VMNYIHQRTRISRSVVAEVLA 182 + L + +I TL+++ E + G I Q SR V ++ Sbjct: 144 RQVTNLAFLDVAGRIAQTLMNLAKQPEAMTHPDGMQIKITRQEIGQMVGCSRETVGRIIK 203 Query: 183 ALRKGGYIEMNKGKLV 198 L I + +V Sbjct: 204 MLEDQNLIHAHGKTIV 219 >UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHS2_HAHCH Length = 235 Score = 96.1 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 70/201 (34%), Gaps = 11/201 (5%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQA 67 L L + +F + +++G + + + ++ + Sbjct: 25 EDLKTELLNLAQIKALRTG-EFLFQRGDKPAGIYAVVKGSLRVAGVNENGKEAILAFVEP 83 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRIL 126 P G + D + ++E T HLP K TL+ WRD L ++ R+ Sbjct: 84 PNWFGEIALFDRLDRTHSALAESPTTLLHLPQKGLETLLAAKPHFWRDFGVLLCFKLRLA 143 Query: 127 ELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQ-----RTRISRSVVAEVL 181 + ++ L+ M + + + + +I Q +SR V ++L Sbjct: 144 FRAVEDATLLPAPLRLARRLVVMAEGYGDFSGQARRVIHIQQEQLGMMLGVSRQTVNQIL 203 Query: 182 AALRKGGYIEMNKGKLVAINR 202 L + G I + G++ ++ Sbjct: 204 KELEQKGLIATSYGEIQILDM 224 >UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=Leptospira interrogans RepID=Q72SA0_LEPIC Length = 231 Score = 96.1 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 68/187 (36%), Gaps = 7/187 (3%) Query: 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGL 77 +F + +++ + I G + + R + I +A +G D L Sbjct: 33 SKKFRLFRKNELLIQEGTKTNGFYFIKSGCVRIFRNSSSGKEQTFSIRRAGEWVGFRDLL 92 Query: 78 MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGH 136 + + N ++ + L+E++ ++ + +A + + LE + + L Sbjct: 93 AGKTFVQNIEAIENVEACYISKEVLNELMEEDSNFQMEILKQMATEWKQLEDQTLTLGTK 152 Query: 137 NSYEQIRATLLSM-IDWNEELRSRIGVMNYI-HQRTRISRSVVAEVLAALRKGGYIEMNK 194 + +I L+S ++ + + I S + L+ + +I++ K Sbjct: 153 QVHSKIAELLISFRTTSPDKSEIELNLTREIMASMVGTSTETLVRALSDFKHRKWIKIRK 212 Query: 195 GKLVAIN 201 ++ +N Sbjct: 213 NRICFLN 219 >UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11W09_CYTH3 Length = 355 Score = 96.1 bits (238), Expect = 7e-19, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 74/212 (34%), Gaps = 16/212 (7%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV 60 ++S + QE KL + +KQ+++S + I+ G + + + Sbjct: 140 IVSEARGNQELEKLIS----DQRKISRFKKKQILYSEGNKANSLYFIVSGKLKTYKTNDD 195 Query: 61 ----LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTIT-LIEQNQLWRDA 115 + G+ + +G + L +D + + + +P + L + Sbjct: 196 GRELITGLYKEGDFLGYMNLLEGSDHTESAMMLDDSEIHIIPKDEFFAVLFSSKDVSEKF 255 Query: 116 FYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMI------DWNEELRSRIGVMNYIHQR 169 L+ E R ++L ++ +++ +L + + + I + + Sbjct: 256 IKMLSDNLIEKEERLLKLAYNSVRKRVAESLFMIYSNFHKDEDPSDFTMAI-YRDDLAAI 314 Query: 170 TRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 S+ V L+ + G I + K+ IN Sbjct: 315 AGASKETVIRTLSDFKDEGLISIQGSKISIIN 346 >UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LG24_HALO1 Length = 229 Score = 95.7 bits (237), Expect = 8e-19, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 62/197 (31%), Gaps = 13/197 (6%) Query: 16 KCLSRYGTRFEFN--NEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPY 69 + L+R R E + VI+ F + G + + + + + + Sbjct: 23 EALARLAERVELREIRRRDVIYLPGDPGGSLFFVNGGRVKISKVTRDGKALTLSYCGPSE 82 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILEL 128 I G + + N + Q L+ + L LA + LE Sbjct: 83 IFGEGCLVGGGPREEMAEAMENAMVTEVERDQFEQLLREYAHLGFQMTKLLAKRRLDLEN 142 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLA 182 + L+ + ++ LL++ D SR + +R V+ L+ Sbjct: 143 KLETLVFRDVTSKLAELLLNLADEYGVEDSRGTLVALKITHQELANLIGSTRETVSLTLS 202 Query: 183 ALRKGGYIEMNKGKLVA 199 +K YI K++ Sbjct: 203 QFKKQRYICTEGRKVII 219 >UniRef50_B0VAJ9 Cyclic AMP receptor protein n=11 Tax=Gammaproteobacteria RepID=B0VAJ9_ACIBY Length = 235 Score = 95.7 bits (237), Expect = 8e-19, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 13/197 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR-REENV---LIGITQAPYI 70 K L + ++ I + ++ ++IL+G +S+ RE++ ++ Sbjct: 22 VKALLKRAH-INRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF 80 Query: 71 MGLADGLMKND-IPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILEL 128 G N ++ + C + L +Q L F L + + Sbjct: 81 FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTR 140 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEEL-----RSRIGVMNYIHQRTRISRSVVAEVLAA 183 + L + +I L+ + E + R I + SR +V VL Sbjct: 141 KMTDLAFIDVSGRIARCLIDLSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKT 200 Query: 184 LRKGGYIEMNKGKLVAI 200 L G I+ + GK + I Sbjct: 201 LEDQGMIQTD-GKAILI 216 >UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SN7_RHOFD Length = 233 Score = 95.7 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 67/204 (32%), Gaps = 13/204 (6%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQA 67 L + L +++ F+ + + +L GV+ + + ++ + ++ Sbjct: 26 QALREALLVNAEIRTIAAGQRL-FARGDAPDGIYCVLTGVVRVTGITENGQEAILAMLES 84 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRIL 126 P G + +E + + + ++ + WR L + R + Sbjct: 85 PQWFGEIALFDNEPRTHDAWAESDAKLLRVSQRALEKMLSERPDDWRHFGRLLTQKLRSV 144 Query: 127 ELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQ-----RTRISRSVVAEVL 181 + + ++ LLSM + I Q +SR V + L Sbjct: 145 FVAMEDIFLLPPTARLARRLLSMAKGYGAWTDHTSRVISISQEQLGLMLSLSRQTVNQSL 204 Query: 182 AALRKGGYIEMNKGKL--VAINRL 203 L G I ++G + V + +L Sbjct: 205 RELEDAGSIHRHRGSIEMVDLRKL 228 >UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34903 Length = 244 Score = 95.3 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 72/219 (32%), Gaps = 15/219 (6%) Query: 1 MLSVVKPLQEFGKLDKCLSRY---GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR- 56 +L ++K F L L F + +++ + +++G + + Sbjct: 17 ILEILKTNSWFSNLPDYLISILMTCATLRFYPDGEMVHYQGDPARGLYAVIQGSVKVSSI 76 Query: 57 -EENV--LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR 113 + + G L K+ + + + K ++E++ ++ Sbjct: 77 SSDGRECVFRYLSPGNWFGEIAMLDKSARTHDAKAISPTILLTISPKDLTMILEKHPVFY 136 Query: 114 DAFYWLA-WQNRILELRDVQLIGHNSYEQIRATLLSMID---WNEELRSRIG---VMNYI 166 L R + ++ LLS+ + E ++ + + Sbjct: 137 QFLNILLCKVIRNAFTIINDSALLSVSARLAKRLLSLAEGYGEPHEKGIQLSLYLTQDDL 196 Query: 167 HQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPS 205 +R + + L A K G+I+ GK++ +N LP+ Sbjct: 197 ATIINTTRQTINKRLVAWEKLGWIDAKYGKIILVN-LPA 234 >UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2C4_HALOH Length = 231 Score = 95.3 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDIPY 84 + +VIF + +N + +V++ G + L + ++ I Q I G ++ +P Sbjct: 36 RKGEVIFFENDDNRNLYVLVSGRVKLSMLSAEGKEKVLTILQEGDIFGEVSLFDQDPLPV 95 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + LP K +I +N + LA + R+L + L+ +++ ++ Sbjct: 96 TAEVIKDSRLIVLPVKDLENIIMKNPKVAIKIIEALAKKTRLLTGQIRDLVFYDAEGRLA 155 Query: 144 ATLLSMID------WNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 + LL + L + I SR V ++L G I+ K K+ Sbjct: 156 SLLLRFAKDFGIDVKSGTLIDLVLTHQEIANLLGSSRVTVTKLLNQFIDEGIIKTYKRKI 215 Query: 198 VAINR 202 V + Sbjct: 216 VIMKP 220 >UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII7_CHIPD Length = 236 Score = 94.9 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 66/191 (34%), Gaps = 10/191 (5%) Query: 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGL 77 + Q++F + + G I L ++ + + I+G L Sbjct: 35 AKVCTTYKKGQIVFQEGAYPFGIYCVNTGKIKLSHCGDDGREQIVRLAKPGDIIGYKALL 94 Query: 78 MKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGH 136 I+ + + +P +++++++ L + LA + R E++ L Sbjct: 95 SAERYTASAIALDDSSVCFIPKDLFMSVLQKDASLSLEMMRILASELRKAEMKITHLAQK 154 Query: 137 NSYEQIRATLLSMID----WNEELRSRI-GVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 E++ TLL + + + + I + +L+ +K G IE Sbjct: 155 PVRERLAETLLFIRETYGVEQDGSTLNVRLSREEIANLVGTATESAIRLLSEFKKDGLIE 214 Query: 192 MNKGKLVAINR 202 + K+ +N Sbjct: 215 LQGKKIRLLNP 225 >UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 Tax=Rhodobacterales RepID=Q1GF83_SILST Length = 222 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 64/191 (33%), Gaps = 7/191 (3%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQA 67 +L L T V+F + + I+ G + + + + + + Sbjct: 17 ERLRAMLDSQATDVHLETGD-VLFERGDEGDALYAIISGALEISTLSAAGRKLSLDMMRP 75 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRIL 126 I G + + L + + + ++ L D + R + Sbjct: 76 GAIFGEIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPELAGDMLKLAGQRMRWM 135 Query: 127 ELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 + + + ++ LL + + + + + + + +R V++ L+ RK Sbjct: 136 NTQLNEQVFLPMPVRLARKLLYLTPADGNGQLSLS-QSELAEFVGATREAVSKTLSNWRK 194 Query: 187 GGYIEMNKGKL 197 G IE+++G L Sbjct: 195 AGLIEISRGGL 205 >UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum SW RepID=B6IXV7_RHOCS Length = 235 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 64/195 (32%), Gaps = 12/195 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYI 70 + + + F + IF+ + + IL G +++ E +L+ A + Sbjct: 30 MEAVLAFAQVRRFAP-DERIFTKGDPGDCLYAILRGRVAVHTESEDAKVMLLNTLAAGEV 88 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G L + + + + + + +E L L + R Sbjct: 89 FGEIAMLDGGERTATVTAAEPADLLRIDRRDFLPFLEARPNLCIRLMTVLCERLRWTSAI 148 Query: 130 DVQLIGHNSYEQIRATLLSMIDW-----NEELR-SRIGVMNYIHQRTRISRSVVAEVLAA 183 + N ++ +L + + +R + + + + +SR +V + L + Sbjct: 149 IEDTVFLNVPRRLAKRILMLAQSEGRQTPDGIRIATFVSQDALAKMLGVSREIVNKTLKS 208 Query: 184 LRKGGYIEMNKGKLV 198 + G I G L+ Sbjct: 209 FQADGAIAYRSGYLI 223 >UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 Tax=Thermoanaerobacterales RepID=B0K8F6_THEP3 Length = 225 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 72/205 (35%), Gaps = 19/205 (9%) Query: 6 KPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVL 61 K L+E K+ + + +IF E + + G + + + + + Sbjct: 19 KSLEEIHKIL--------IIKSFKKGSIIFMEGEKGEAIYFVKSGKVKISKTSSVGKEHI 70 Query: 62 IGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLA 120 I I + I + + + P + + L + LI +N + +A Sbjct: 71 IKIMEEGDIFAESVLFVGGEYPATAEAIEDSEVIMLKNQDIENLILKNSKIALSIIKLMA 130 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDW-----NEELRSRIGV-MNYIHQRTRISR 174 + + + + L +S + + LL+ E + + + + SR Sbjct: 131 KRLKNVAVIIENLALRDSIGRTASVLLTFAKERGINTKEGILLNLNLNRQDLANIVGTSR 190 Query: 175 SVVAEVLAALRKGGYIEMNKGKLVA 199 V +L+ + K G I +++ K++ Sbjct: 191 ENVTRILSQMDKEGIIHLDRQKIII 215 >UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNP2_9BACL Length = 221 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 12/193 (6%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLM 78 + IF E + ++ G++ + + + ++ + + Sbjct: 28 AVLRQYRRGETIFIEGTPRESVYFLVRGLVKVVKVDEEGREHVVAVLGKGQMFPHVGFFQ 87 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 P + T Y + + L+ ++ + LA + L+ + +L ++ Sbjct: 88 DLPYPGTASAIEQTTVYAISTRAFDALLRRHPPIALKLLRVLADRIVQLQAKLQELAVYD 147 Query: 138 SYEQIRATLLSMIDW-----NEELRSRIG-VMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 S E++ A L + E +R + I Q + R V + LR+ G IE Sbjct: 148 SRERVVAFLRHFAEEQGCVEPEGVRVHLPITHAEIAQMVGLRRESVNRIWNQLRREGAIE 207 Query: 192 MNKGK-LVAINRL 203 + ++ ++RL Sbjct: 208 GERDTWVIHLDRL 220 >UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ46_HALOH Length = 219 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 61/192 (31%), Gaps = 10/192 (5%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGL 73 L + T +++F + ++++EG I + + ++ + G Sbjct: 22 LLKSITNKRRYKAGEILFFEGDKPDAFYIVVEGEIQIIKVSYDGKEKILEVMGPGDFFGE 81 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQ 132 + + + + ++ + L+ + + L+ + R Sbjct: 82 MAIIDSKGRSATARVIRDSSLLVVGNQEFLNLVREYPFIALKIIGELSRRLRQANQDIES 141 Query: 133 LIGHNSYEQIRATLLSMIDWNEELRSRIG-----VMNYIHQRTRISRSVVAEVLAALRKG 187 L + +++ M + + I + SR V ++ L+ Sbjct: 142 LAFLDVETRLKKFFRRMTGEIRDNGEAVVIDRNITHQDIARFIGTSRETVTRIINKLKDK 201 Query: 188 GYIEMNKGKLVA 199 G +E+ + K++ Sbjct: 202 GLLEIKREKIIL 213 >UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Tax=Actinomycetales RepID=A4X9W3_SALTO Length = 230 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 67/187 (35%), Gaps = 6/187 (3%) Query: 21 YGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADG 76 + Q++F + E V+ G +++ R E ++ + + P ++G Sbjct: 31 AAAVPRTYRKGQLLFVENDPGESLIVLRRGAVAVFRTAPTGERAVLSVIRPPEVLGEVSL 90 Query: 77 LMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIG 135 L + + +C L + L+ N + L R L ++ + Sbjct: 91 LDASTRSASAEAIEDCAALALSRGAFMELVHSNPRILDAVMRSLGSLIRRLTEQNADHVF 150 Query: 136 HNSYEQIRATLLSMIDWNEE-LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 + ++ TL+ + ++ + + + + + SR V + + + G++ Sbjct: 151 LDLPGRVAKTLVRLAGESQAPMITIELNQSQLAEMAGGSRQSVNQAIGSFASRGWLRTEG 210 Query: 195 GKLVAIN 201 ++V + Sbjct: 211 RRIVVTD 217 >UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Tax=Acidithiobacillus RepID=B5EPN3_ACIF5 Length = 246 Score = 94.2 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 8/196 (4%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYI 70 L + +++F+ + + G I+L + ++ I Q + Sbjct: 43 IAPLLAQSQPLTLESG-EILFAEGSPARSFYFLAVGRINLIAAAATGQEKIVEIIQPDDL 101 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRILELR 129 A + P ++ T +P + +EQ L R L+ + L Sbjct: 102 FAEAVAFLGGRYPVTAQADATTTVLEIPLDLFVATLEQRPLLMRQMLARLSMRLHFLVKE 161 Query: 130 DVQLIGHNSYEQIRATLLSMI--DWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 L ++ +++ + LL + + + R ++ ++ VL+ +RK Sbjct: 162 LRHLSVESAEQRLASYLLELCPVVNSPAAIELPAKKAAVAARLGLTPETLSRVLSRMRKA 221 Query: 188 GYIEMNKGKLVAINRL 203 G IE+ + + + L Sbjct: 222 GLIEVEQRTISIPDPL 237 >UniRef50_A0NV10 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Rhodobacteraceae RepID=A0NV10_9RHOB Length = 229 Score = 94.2 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 62/204 (30%), Gaps = 17/204 (8%) Query: 3 SVVKPLQEFGKLDKCL----SRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR--- 55 +K LD L SR + + ++F + + +LEG + + Sbjct: 6 DFLKNSFSLEGLDPELAVGLSRLARPMKISAG-TILFENGDPGNGCYAVLEGSLKVSLLS 64 Query: 56 -REENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WR 113 + L+ + ++G L +I+ + ++N +R Sbjct: 65 VEGDEQLLAVLGPGDLVGELALLDGRPRSATVIALKEAQLAFIDKAAFQRFADENPAVYR 124 Query: 114 DAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWN----EELRSRI---GVMNYI 166 + + R ++ TLL + + ++ R I I Sbjct: 125 HMLSIVGKRLRHANDVLAARSFLPLPGRVAQTLLQLAETFGKPLDDGRLLIHYKLSQADI 184 Query: 167 HQRTRISRSVVAEVLAALRKGGYI 190 +R V+ VL ++ G I Sbjct: 185 ANMAGAARENVSRVLNDWKRAGTI 208 >UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023C9_SOLUE Length = 236 Score = 94.2 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 56/179 (31%), Gaps = 8/179 (4%) Query: 31 KQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIPYKL 86 +++F F+I++G + + R V++ I AP + P + Sbjct: 48 DEMLFWEGEACVGIFLIIQGSVKIFRTSPGGREVMLCIETAPASVAELPLFDGGPYPASV 107 Query: 87 ISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRAT 145 + QN + + + R L + + +++ Sbjct: 108 RVTEPVVSLFINKSDFQQFCRQNPDVALKVLAVVGRRLRQLVGLVEAMTFGSVTQRLAKM 167 Query: 146 LLSMIDW--NEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 LL E+ + R R V++ L R G I++ ++ +NR Sbjct: 168 LLDASKEAGPEDF-DLPATHQELASRLGTVREVISRNLGRFRAQGLIKIQDRQVEIVNR 225 >UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=Bacillaceae RepID=B7GKB9_ANOFW Length = 241 Score = 94.2 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 12/190 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYI 70 + T K ++F + F I+ G + + + + ++ I + Sbjct: 37 LNAIVHIATVRTCKP-KTLVFMQGDQLDRVFFIVRGTVKIYKTDVSGKEQIVSILHEGEM 95 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 + P T +P +Q + L F + + L+ R Sbjct: 96 FPHTGFFRRGTYPAHAEIMNETTLIVIPMEQFEQTLMCYPQLCIKLFRIMGEKIIELQTR 155 Query: 130 DVQLIGHNSYEQIRATLLSMIDW-----NEELRSRIG-VMNYIHQRTRISRSVVAEVLAA 183 +L+ HN+ EQ+ + + R + + +R V+ VL+ Sbjct: 156 LEELVFHNTAEQLARLFIRLAKTSGVYVKGRYRLKATLTTRELANMIGTARETVSRVLSQ 215 Query: 184 LRKGGYIEMN 193 +++ G + + Sbjct: 216 MKQQGVVTTD 225 >UniRef50_A4EN16 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EN16_9RHOB Length = 226 Score = 93.8 bits (232), Expect = 3e-18, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 67/193 (34%), Gaps = 10/193 (5%) Query: 20 RYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVIS----LRREENVLIGITQAPYIMGLAD 75 G + Q IF+ + + D + +L G + + ++ G Sbjct: 26 PLGVTEQTLKPWQTIFNQEDKSCDLYFLLSGSLLAVFWTTQGREIVFSRFPVGAYFGELA 85 Query: 76 GLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLI 134 ++++ + + + + L + + Y L + R L R++++ Sbjct: 86 AFDGTPRSLAVVAKNDAKVLAMQRESFLQLFNEVPVIRERITYNLVDRIRTLTRRNMEMT 145 Query: 135 GHNSYEQIRATLLSMIDWNEELRS-----RIGVMNYIHQRTRISRSVVAEVLAALRKGGY 189 + +++ LL + + +L I +R +V+ ++ L K G Sbjct: 146 TLSVEQRVGKFLLRLAAEHSKLTHGAVIDDAPTHAEIAGSIGANREMVSRSISKLAKQGV 205 Query: 190 IEMNKGKLVAINR 202 I+ + ++ ++ Sbjct: 206 IKSARQRIEILDP 218 >UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SML3_THIDA Length = 225 Score = 93.4 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 10/195 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYI 70 + + + + + + F F +L G++ L R E ++ + + + Sbjct: 25 FDQVLAHASVRKLAPNECL-FDQGDPCTHFFFVLSGIVKLCRVAPSGEEKVMDLVRPGHY 83 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLI-EQNQLWRDAFYWLAWQNRILELR 129 A M P + L + + L+ L ++ + L Sbjct: 84 FAEAVMFMGGRYPVYARALDGTRLVALDNRHFLGLLGSNRDLCMRLLSTMSQRIHSLINE 143 Query: 130 DVQLIGHNSYEQIRATLLSMI---DWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 L H+ +++ LL + D +R R+ + I R I ++ VLA LR Sbjct: 144 IDHLTLHSGAQRVIGYLLEQLPDGDAPGSVRLRVP-KHVIASRLGIQPETLSRVLAKLRT 202 Query: 187 GGYIEMNKGKLVAIN 201 G I+++ +V + Sbjct: 203 GHLIDVHDDMIVLND 217 >UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV16_RUBXD Length = 249 Score = 93.4 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 11/183 (6%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMK 79 R + I+S +V+ G + L R +VL+ I +G Sbjct: 48 RERGYAAGERIYSGGDPAGTFYVVAVGKVKLVRPSAQGRDVLLEILGPGDTLGTVPMFGD 107 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNS 138 + P ++ +C + A T++E+ + L+ Q R Q + Sbjct: 108 DVYPDSAEAQTDCCLLAITAADLRTVVERYPPVAHTLLEVLSGQLRSAREAIRQASAGSV 167 Query: 139 YEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLAALRKGGYIEM 192 ++ A+LL + D R + T V+ V++ RK G I Sbjct: 168 ESRVAASLLKLADRLGSDRRGETLIQVPLTRQDLADMTGAQVETVSRVMSRWRKEGLIRS 227 Query: 193 NKG 195 +G Sbjct: 228 GRG 230 >UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Tax=Desulfuromonadales RepID=Q39ZI3_GEOMG Length = 230 Score = 93.4 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 63/199 (31%), Gaps = 12/199 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYI 70 ++ TR F + + FS +++ +G + L + + ++ Sbjct: 21 LSDVAAIATRRPFARGESL-FSEGEPASGFYLLAQGSMKLCKVSPDGKEKVLHFVHPGET 79 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW-LAWQNRILELR 129 A P + + P + + ++E+N + L+ R + Sbjct: 80 FAEAAFFGDGKYPAEARATEKGEAIFFPREGFMGILERNPRFSLNLIVSLSLMLRRFARQ 139 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMN------YIHQRTRISRSVVAEVLAA 183 +L ++ A L+ + + ++ + R ++ Sbjct: 140 IEELTFAEVPARLAAHLVELAERKSTAFQGKTYLDLDMKKGELASRLGTVSETLSRAFRK 199 Query: 184 LRKGGYIEMNKGKLVAINR 202 L++ G IE+ ++V + Sbjct: 200 LKEEGLIEVEGSRVVIFDM 218 >UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Tax=Bacteria RepID=A1SH88_NOCSJ Length = 261 Score = 93.4 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 13/195 (6%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQA 67 ++ + E + I+ + + E F++ G + + R + +VL+ + Sbjct: 41 EEIIA--LDEAAKVRGYTEGEAIYHAGGSAEHLFLLASGRVKVLRPALDDSDVLVEVITP 98 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRIL 126 G L + P ++ + A ++ ++ ++ + Sbjct: 99 GATFGSVAALGHSTYPDTAMALTVSCVLRISAADLRRVMNRHPAVALAVLDEVSHRLEEA 158 Query: 127 ELRDVQLIGHNSYEQIRATLLSMIDWNEELR------SRIGVMNYIHQRTRISRSVVAEV 180 + +L G +++ ++LL + D E R + T + V+ Sbjct: 159 QQTVRRLSGGTVEQRVASSLLVLADQLGEPRDGGVLLQLPLTREDLASMTGTTTESVSRT 218 Query: 181 LAALRKGGYIEMNKG 195 L+ R+ G IE + Sbjct: 219 LSKWRRAGLIETGRR 233 >UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Tax=Persephonella marina EX-H1 RepID=C0QS01_PERMH Length = 223 Score = 93.0 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 8/188 (4%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPY 69 + + Y +++ K++++ + D F+ILEG I ++ ++I I Sbjct: 22 FFRHIIPYMKIYQYQKGKEIVY-QGEESSDLFIILEGRIKASIFDDEGNELVIDIFGEGD 80 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILEL 128 +G + LI+E + L K I ++++ L L ++ R + Sbjct: 81 FVGELSLIDGKPRSASLIAETDVVVAVLERKYFIEILKKYPELCLKLAENLVYRLRKADK 140 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG--VMNYIHQRTRISRSVVAEVLAALRK 186 L + E+I + N+E ++ I +R SR V + L + Sbjct: 141 FLESLAFLDVKERIINLFIESAVENDERVYKVPKMSHREIAKRIGASRESVTKALKRFSE 200 Query: 187 GGYIEMNK 194 G + + Sbjct: 201 LGILSEDN 208 >UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Dictyoglomus RepID=B5YAP2_DICT6 Length = 225 Score = 93.0 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 20/185 (10%), Positives = 60/185 (32%), Gaps = 11/185 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGLADGLMKND 81 + + +IF + F+I G + + + ++ I G L Sbjct: 31 KSYPKDSIIFQKEDPGNFFFLICSGRVKVIIETEEGKEGILAILYPTEFFGEMSLLDGEP 90 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 +++ + + ++L+ ++ L L+ + R + L+ ++ Sbjct: 91 RSATVVALEETNVIIIERNEFLSLLYKHPELALKILKTLSLRLRKANRQIETLMFLDASG 150 Query: 141 QIRATLLSMIDWNEE------LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 +I L+ + + L + +SR +L + + G + + + Sbjct: 151 RIARLLIDIARDRGKKVDEGVLIDLEFTRQELGNLIGVSRETTIRILKSFEEEGILSIER 210 Query: 195 GKLVA 199 ++ Sbjct: 211 NHIII 215 >UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8GAV8_CHLAD Length = 224 Score = 92.6 bits (229), Expect = 7e-18, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 59/198 (29%), Gaps = 9/198 (4%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQA 67 + + L+ + + VI + + + I+ G + L R ++ + A Sbjct: 20 DHVVQALAMIAQPRSYQSG-AVIVLAGEPPQAMYTIVAGRVKLVRIALNGREQIVNVMGA 78 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRIL 126 P + + + LP L+ ++ L A + + Sbjct: 79 GQHFNTVPIFDHGPCPVNVQAITDVDLLVLPIDDMRRLVVEHPLLAMALLREFAGRLCHM 138 Query: 127 ELRDVQLIGHNSYEQIRATLLS--MIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAAL 184 + H+ ++ LL+ + E + R +V+ L Sbjct: 139 VNLIDNIALHSVQGRLAQLLLNRAIASEQGEF-VAPLTQAEMAAMIDTVREMVSRTLHQF 197 Query: 185 RKGGYIEMNKGKLVAINR 202 G I + +G + +R Sbjct: 198 EAQGLIRIERGAIAICDR 215 >UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2K0_DESAS Length = 232 Score = 92.6 bits (229), Expect = 7e-18, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 14/191 (7%) Query: 27 FNNEKQVIFSSDVNNEDTFVILEGVISLRR--EENVLIGITQ---APYIMGLADGLMKND 81 + VIFS+ + I G + + R + + + IMG+A+ L + + Sbjct: 37 NYPKGHVIFSAGDKANQIYYIESGYVKIYRLNADGRKVNVGSLRNPGEIMGIAETLYETE 96 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSYE 140 + + Y + K + L+ + L + R E +L+ Sbjct: 97 RTCFAGTMTDAVLYVVTYKDFLKLMTDHHYLSIKVAKLLGTRMREAESIIHELVCWQVPG 156 Query: 141 QIRATLLSMID------WNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ LL + + N L I SR V ++ ++ I + Sbjct: 157 RLALMLLKIGERCGINTENGTLIKLRLTHEEIANMIGTSRQTVTSLINTFKQEQSITVEG 216 Query: 195 G--KLVAINRL 203 K+V N+L Sbjct: 217 KDIKIVNPNKL 227 >UniRef50_A8U5T9 Transcriptional regulator, Crp family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5T9_9LACT Length = 234 Score = 92.6 bits (229), Expect = 7e-18, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 12/183 (6%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGI----TQAPYIMGLADGLMKN 80 + QV+F E F ++ G++ L + + + + Sbjct: 37 LRKYKKGQVLFDEGDIREKIFYLVSGLVKLEKYDESAFYTYTDYVKKETLFPYGGMFSDE 96 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW-LAWQNRILELRDVQLIGHNSY 139 Y + + Y++P LI N FY L+ E R ++ N+ Sbjct: 97 TYHYSAYAVTDIELYYIPTILFEKLITDNPKQMIYFYHKLSKILESHEKRVQYIVVSNAT 156 Query: 140 EQIRATLLSMIDWNEELRSRI-------GVMNYIHQRTRISRSVVAEVLAALRKGGYIEM 192 +I TL ++ + + +N + + SR V + L++ +E Sbjct: 157 NRIIKTLNYLMKELGDYTNPTMVKIPYPITINEVADMSGCSRETVGNTIKKLKEMDKLEY 216 Query: 193 NKG 195 + Sbjct: 217 ERK 219 >UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Rhodopseudomonas palustris RepID=B3QJQ9_RHOPT Length = 236 Score = 92.2 bits (228), Expect = 9e-18, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 66/186 (35%), Gaps = 10/186 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYI 70 L R F+ + V F + FV++EG I + ++ + + + Sbjct: 33 LDQLCRAARLVRFSRGETV-FLKGDDANALFVVVEGAIRVSSGSTDGRTAMLNLIGSGEV 91 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G L I+ + + + LI+ L L + R + Sbjct: 92 FGEVAVLDGLPRTTDAIAHSDSVLLSIARRDLFELIDTQPQLMMKLIVLLCGRVRATSQQ 151 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEE---LRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 L+ + ++ T++ + + + + LR ++ + + +SR V ++LA Sbjct: 152 VEWLMLQSMSARLAGTIMRLAERDTDRAPLRLQL-TQQQVSEMAGMSRESVNKLLARWAS 210 Query: 187 GGYIEM 192 G+I + Sbjct: 211 QGWIRL 216 >UniRef50_UPI0001C42484 Crp/Fnr family transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42484 Length = 233 Score = 92.2 bits (228), Expect = 9e-18, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 12/174 (6%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIPYK 85 IF D E+ + I G I + + +N ++ I + + K P Sbjct: 39 RGSHIFMQDEPIENVYFIYRGRIKIYKADNRGREQIVAILREGEMFPHVGFFRKGGYPAY 98 Query: 86 LISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRA 144 + +P ++ +N L F+ L + L+ R I +N+YEQI Sbjct: 99 AQVVDHAQLVVIPIGNFEDILRKNPELCIQVFHVLGEKIVDLQDRLEAQIVNNTYEQIIK 158 Query: 145 TLLSMIDWNEELRSRIGVM-------NYIHQRTRISRSVVAEVLAALRKGGYIE 191 ++ + + N E + + + +R V L LRK G ++ Sbjct: 159 LIIRLGETNGEPAEDGTTVIKSDYTNQQLAKMIGTTRETVNRTLTKLRKEGLLK 212 >UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridiales RepID=C8W1Q7_DESAS Length = 222 Score = 92.2 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 17/194 (8%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQA 67 ++ + ++ V+F + F+I EG L R ++ + Sbjct: 19 QQVFSQVCLKAAAKKYYQRGDVLFHQGDPTDSLFLIKEGSFKLVRVNEEGKEAILQVAGK 78 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAW----QN 123 ++G A K P I+ L + +I ++ D + + + Sbjct: 79 GEVLGEAALFRKGTQPASAIALETARVCSLSRQSLEQIIRESP---DLAMQVIFSLGNRL 135 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEE------LRSRIGVMNYIHQRTRISRSVV 177 + +L ++ E++ L+ + + E I +SR +V Sbjct: 136 YDTWEQVTELRTGSTREKVLNLLIRLSIEHGEPCPEGTKIKLYLTQQDIADFVGVSRVMV 195 Query: 178 AEVLAALRKGGYIE 191 A+ L L YI+ Sbjct: 196 AQTLKELSTRNYID 209 >UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Magnetospirillum RepID=Q2W4U7_MAGSA Length = 239 Score = 92.2 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 65/199 (32%), Gaps = 12/199 (6%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPY 69 L L+ + + ++ +FS + +++ +G+I + V G+ + Sbjct: 31 LLDELAAKAKMVKVDA-RETLFSKGDPGDRLYLVAKGLIRIGVLSADGREVTYGLIKPGQ 89 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILEL 128 + G L + + L K T + ++ L + R + Sbjct: 90 LFGEIAVLDGKERSADATAMEATELIALERKDVHTFLHRHPAQALHLIEVLCERIRRADN 149 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLA 182 + ++ + ++ LL ++ I ISR V +VL+ Sbjct: 150 QLEDMVFLSLPSRLAKHLLMLVQTMGTKAKPGTPSAIKLSQQEIADHLGISRESVNKVLS 209 Query: 183 ALRKGGYIEMNKGKLVAIN 201 + G + + +G++ Sbjct: 210 KWEQAGIVTLGRGQITLNK 228 >UniRef50_Q6MK23 Transcription regulator containing cAMP-binding domain n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK23_BDEBA Length = 214 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 69/179 (38%), Gaps = 8/179 (4%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKND 81 + + ++F + ++ F+I +G + + + + +++G+ A G L ++ Sbjct: 30 KTYPKNALLFEQEDESKGLFLITKGTVKISKISPNGKEIVLGLLGAGKTFGEGSLLGQDR 89 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQL--WRDAFYWLAWQNRILELRDVQLIGHNSY 139 + ++LP K+ ++++N L + W L + ++ Sbjct: 90 QADTAATTEPTEVFYLPKKELQNILQKNPLLYQSVVASLVRWMAN-LNNVIENINTPSAK 148 Query: 140 EQIRATLLSMIDWNEELRSRIG-VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 E++ + L + + ++ + + + + LA L G I+MN ++ Sbjct: 149 ERVWSYLCRLQSEQNKPLLQLSGKKHEVALMLGLRPETFSRALAELENEGQIKMNHKQI 207 >UniRef50_UPI00017889C0 transcriptional regulator, Crp/Fnr family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017889C0 Length = 249 Score = 91.5 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 66/203 (32%), Gaps = 17/203 (8%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYI 70 + + + + + + + G + + + + + + + Sbjct: 30 LALIREMAEPIGLFAGDCL-YQENDPADRLYFVNRGSLKVSKLLEGGLSATLSLHIPGDL 88 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELR 129 G D + ++ + + +P + +I N + + W+A R + + Sbjct: 89 FGEPDPFGRAVHHFEARAMEDSEVGVVPQTELDKIIRINGDFAVEYMGWMALMQRTTQSK 148 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEE----------LRSRIGVMNYIHQRTRISRSVVAE 179 L+ H + + LL + + + RI + + + +R V Sbjct: 149 LRDLLLHGKSGALCSLLLRLYNMYGTCGTAKDHRAIIGKRITNL-EMAEMIGSTRESVNR 207 Query: 180 VLAALRKGGYIEMNKGKLVAINR 202 +L L+ G I +G++V + Sbjct: 208 ILNELKDLGVISTERGRIVLNDP 230 >UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G111_DESHD Length = 239 Score = 91.1 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 15/192 (7%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKN 80 + QV+F ++ ++I G I + + ++ I +G L K+ Sbjct: 43 RRRYKKGQVLFFEGDVSDKFYIINHGKIKTFKHTREGKEQILYILSEGDFIGDLSLLKKS 102 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA---WQNRILELRDVQLIGHN 137 PY + + L ++++N L + LE L + Sbjct: 103 AFPYNAEALEDVGVCTLSKDDLDRILKENP--EICLKILESVHDRLVNLENLVQTLSTKD 160 Query: 138 SYEQIRATLLSMIDWNEELRSR------IGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 +I L + E + + ++R ++ L+ ++ G +E Sbjct: 161 VEARIAGLLFNFSKNFGEHKDGKVMLNIALTREEMANFIGVTRETMSRKLSGMQDEGILE 220 Query: 192 MNKGKLVAINRL 203 + K + INRL Sbjct: 221 LVGNKRIIINRL 232 >UniRef50_C3XI85 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=C3XI85_9HELI Length = 190 Score = 91.1 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 12/196 (6%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL------IGI 64 KL + + G + + N +++F +++L G + L + + + + Sbjct: 1 MQKLFNIVEQMGNKRTYQNG-EILFLQGAMPTHLYLLLSGKVRLYKTKEHISSTQLTLHT 59 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNR 124 +P + M++ P C + + T N + Sbjct: 60 LSSPQFIAEMPFFMQSPYPANAECASICEIITISQESFHTHCLGNS---EICLLFITSLC 116 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAAL 184 I + L + + L +I I+ ++ L AL Sbjct: 117 KKIQILESHIALQNQSLQEKVLSYLSHNKDSL--HTLTQRHIANALNIAPESLSRTLKAL 174 Query: 185 RKGGYIEMNKGKLVAI 200 + G + +KGK+ + Sbjct: 175 KTQGILTTHKGKVKLL 190 >UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYA1_DESAS Length = 227 Score = 91.1 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 10/188 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKN 80 + N+ + IF ++I G + L + + + + I + I G L + Sbjct: 30 RKLYNKNEFIFREGEATCTIYLIKYGRVRLFKISEGGKEITLDILKEDDIFGENTFLDDS 89 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 + + + I L++ + L + + + + Sbjct: 90 KHTMNAQAIEDTFICSCNKEHFILLLQNPRTSLKIIQLLGKKLNDYTDQVANIAFRDVKG 149 Query: 141 QIRATLLSMIDW-----NEELRSRI-GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 +I ATLL + D E + I + SR +V VL LR+ G I Sbjct: 150 RISATLLRLADEYGKPSPEGVIINIELTHQDLANLVNASRVMVTNVLINLRQEGAILTKG 209 Query: 195 GKLVAINR 202 ++ +N+ Sbjct: 210 QRISLLNK 217 >UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QLW5_9SPHI Length = 350 Score = 91.1 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 66/190 (34%), Gaps = 9/190 (4%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV---LIGITQAP-YIMGLADGLM 78 + +KQ ++S + + G + + R + L+ P +G L Sbjct: 156 RKLHRVPKKQFVYSDGDEPTRLYFLKNGRVKIVRTSHDGKELVTDLFGPNSFIGYRALLE 215 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNRILELRDVQLIGHN 137 + ++ + ++P + + ++ R + LA E + + + + Sbjct: 216 NTNYTDSAVTLDDSELIYIPKNEFLHILGTQPEAGRQFVHLLAGHVNGKEEQLLSMAYSS 275 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVM--NYIHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 ++ TLL + + + + + + + +L + G IEM+ Sbjct: 276 LRRRVADTLLRLGTSPDGEPVPPIQLSRDDLAAVIGTATESLIRILTEFKHDGLIEMSSA 335 Query: 196 --KLVAINRL 203 ++V ++L Sbjct: 336 GIRIVEPDKL 345 >UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7L5_GEMAT Length = 229 Score = 91.1 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYIMGLADGLM 78 TR + + +I S + +V+ G + + V++ + G + Sbjct: 33 TREQRFAKGALIVSEGDAGDALYVVRSGEVKVVLVGDDGREVILQVLGVGDHFGELALID 92 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQ---LIG 135 +++ + L + +EQN + A+ + +R L D L+ Sbjct: 93 GRPRSAHVVATHASSLLVLRRPEFRRQVEQNP--KVAWELMVELSRRLRQADGTIGSLVL 150 Query: 136 HNSYEQIRATLLSMID-WNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 + ++ LL + I Q SR V+ ++ + G I + + Sbjct: 151 LDVPGRVAKVLLEHATPGEPASLVKQLTHQTIAQMIGASRETVSRAMSEFQDQGMIMVQR 210 Query: 195 GKLVAINR 202 + +NR Sbjct: 211 RVVTIVNR 218 >UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FC47_DESAA Length = 227 Score = 91.1 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 8/194 (4%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYI 70 L+R + E+ +IF + +V+ +G + + + + ++ I + Sbjct: 22 LDSLARIASMREYRKG-AIIFFEGEYCDGFYVVAKGRVKITKISSKGKEQILYILETGEP 80 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELR 129 G + P + P + LI Q + +LA ++R L L+ Sbjct: 81 FGQLAIYHGDAFPATAQALETSVCLFFPKTPFLELISQRPALPMNMLAFLARRHRELTLQ 140 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRS--RIGVMNYIHQRTRISRSVVAEVLAALRKG 187 + E++ LL + + L++ + + ++ LA L Sbjct: 141 IENIALKEVPERLAEYLLYLCWEQKSLKTVSLPISKEQLAYLLGATPETLSRSLAKLVDD 200 Query: 188 GYIEMNKGKLVAIN 201 G I M+ + I+ Sbjct: 201 GMIMMDGKDISIID 214 >UniRef50_A7NG37 Transcriptional regulator, Crp/Fnr family n=2 Tax=Roseiflexus RepID=A7NG37_ROSCS Length = 227 Score = 91.1 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 10/201 (4%) Query: 13 KLDKCLSR-YGTRFEF-NNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQ 66 +L L +G V + + + + +++ G + L + I I Sbjct: 21 QLMSALRDIHGEIAAVQRPAGYVFYGLEDSGAEMYLLYRGRVRLYTISPEGRALTILILD 80 Query: 67 APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRI 125 AP + G IS CT + + + L + + R Sbjct: 81 APAVFGEVTLAEGAYHDSYAISVTPCTVGAVHRETLRRALRNQPSLALRFMTVMGQRLRA 140 Query: 126 LELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI-GVMNYIHQRTRISRSVVAEVLAAL 184 +E + + + +++ A LL + + + + + R V + L Sbjct: 141 IERKLSDIAFKSVPQRLAAALLGLWTEQRDTPPTVRSTHQQLAELIGSHRETVTKALGDF 200 Query: 185 RKGGYIEMNKG--KLVAINRL 203 R G I ++ L+ + RL Sbjct: 201 RAAGLIRVDDDAIHLIDLVRL 221 >UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK24_BDEBA Length = 233 Score = 90.7 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 8/177 (4%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYIMGLADGLMKNDIPY 84 Q+IF S + F I G++ L + + +G Sbjct: 47 KAGQIIFYSGNDPLGIFTIQSGLVKLEVISASGAAHTLRLVGPGGTLGYRSMFANEPYHA 106 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 ++ +C +P + + + + L ++ R+ E + + + + E+I Sbjct: 107 SAVAVEDCELCFVPKAEIMNIFKSYPELAMKLLSHISKDLRMAEEKWMDQMDKGASERIA 166 Query: 144 ATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAI 200 L+ + + + I Q + V L+ K G I+ G+ + I Sbjct: 167 EALIFL---QDHFAHQNWTRREIAQWAGTTPETVIRTLSQFEKDGLIDQTDGRSIRI 220 >UniRef50_Q0A6E9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6E9_ALHEH Length = 218 Score = 90.7 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 62/195 (31%), Gaps = 12/195 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYI 70 + L R + ++ + +E + G I++ +E V+I A Sbjct: 15 IQQLLAQSERHLYAPRASIM-MAGEASETLCYLNSGSITIFMDESSHREVIIDYLYAGSF 73 Query: 71 MGLADGLMKN-DIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILEL 128 G + + + G C +P + + L + L LA + R + Sbjct: 74 FGALGLFRQGMPRGAWVRARGACEVAEIPYDRFLELNREYPELMEMLAGQLADRLRRAQQ 133 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSR-----IGVMNYIHQRTRISRSVVAEVLAA 183 + L + +I + L + E + + + SR +V VL Sbjct: 134 KIHDLACLDVAGRIMSALRDLASRPEAMTHPDGMQVRITRQELGRIVGCSREMVGRVLKT 193 Query: 184 LRKGGYIEMNKGKLV 198 L + + + +V Sbjct: 194 LDEEDQLAVQGKNIV 208 >UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides sp. JS614 RepID=A1SH69_NOCSJ Length = 267 Score = 90.7 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 60/194 (30%), Gaps = 10/194 (5%) Query: 19 SRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE--ENVLIG--ITQAPYIMGLA 74 ++++ E F++ +G I + R + + I I G Sbjct: 65 LAQAAPMRAYATGALVYTPHQPLETLFILKKGRIRIFRVSPDGRALTTAIIDPGTIFGEM 124 Query: 75 DGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQL 133 + + + + + L+ + + L + LE + Sbjct: 125 VIVGQQMHDSFAEALDDVVVCVMTKADVRRLLLGDPRISARISETLGRRIGELEQKFSDA 184 Query: 134 IGHNSYEQIRATLLSMID----WNEELRSRI-GVMNYIHQRTRISRSVVAEVLAALRKGG 188 + + E+I L+++ ++ + SR ++L L G Sbjct: 185 VFKSVPERIAGALVTLASATSGRPLGRGIQVRLTHEQLAALAATSRETTTKILGDLADQG 244 Query: 189 YIEMNKGKLVAINR 202 I + +G++ +NR Sbjct: 245 LITLGRGRITILNR 258 >UniRef50_B8FWH5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8FWH5_DESHD Length = 234 Score = 90.7 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 63/186 (33%), Gaps = 11/186 (5%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISL---RREENVLIGITQAPYIMGLADGLMKN 80 R KQ +F + + +L+G I + + I Q P L Sbjct: 33 RVRHYAAKQFLFFFGEESNSVYFLLKGRIQILLMSEFTEKIFRILQPPAFFPEV-VLDSK 91 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSY 139 PY ++ + L K + ++N + +A R + + ++ Sbjct: 92 TYPYAALTAEASDVFVLDRKALVQYFKENPSTLLPFYQNMALDLRRAYRQIKNIALGDAR 151 Query: 140 EQIRATLLSMIDWNEELRSR------IGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMN 193 ++ A L ++ + + + ++R V+ +L+ LR G ++M Sbjct: 152 SRLGAKLFALAHVHGQETPEGILITVPLTATELAGMCSLARESVSRILSELRDLGILKME 211 Query: 194 KGKLVA 199 K ++ Sbjct: 212 KKQITI 217 >UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XD76_METSD Length = 227 Score = 90.3 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 63/206 (30%), Gaps = 9/206 (4%) Query: 5 VKPLQEFGKLDKCLSR-YGTRFEFNN--EKQVIFSSDVNNEDTFVILEGVISL----RRE 57 VK L L + L Y F +K + + F +L G + + Sbjct: 6 VKTLPLLQGLIQPLLDEYSRYFRMFRIEKKHFVCHKGDEANELFFLLSGRLMVVDISLEG 65 Query: 58 ENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAF 116 + G L P +++ LP + +L+ + Sbjct: 66 RQTGLNFIAPGDYFGELSVLDDLPRPASIVAVSESLIAALPKSKVNSLVNHVPKVAERML 125 Query: 117 YWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSV 176 + + R++ L N+Y ++ L+S + N+ + SR Sbjct: 126 KDMCHRMRMVTDLRCLLGVPNAYSRV-FLLISRMAKNQPYVDHFPSHQQVAIMVNTSRET 184 Query: 177 VAEVLAALRKGGYIEMNKGKLVAINR 202 V+ L L G IE +L+ N Sbjct: 185 VSRALGLLVTEGVIEKEGMRLIVKNP 210 >UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31809 Length = 231 Score = 90.3 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 59/195 (30%), Gaps = 12/195 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE--ENVLIGITQ--APYI 70 ++ + + VIF ++ +V+ G + + RE + I + I Sbjct: 26 LSRVAEVAVPRRYEPGR-VIFREGDASDTCYVLKNGHVRVIREHADGRTITLANFGPGDI 84 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G + + + + L+ ++ + L + R R Sbjct: 85 FGELAMFEDERRSATIETLDDVEAIAILGSDMRRLMREHPDIAVKLVVSLGRRLRAANER 144 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSRI------GVMNYIHQRTRISRSVVAEVLAA 183 ++ + ++ ++ + I + SR + LA Sbjct: 145 IASQSFQTVQSRVANVVTQLVKEAQDEGAGERDVLVSATQADIAKLAGSSRESASRFLAV 204 Query: 184 LRKGGYIEMNKGKLV 198 L + G IE +GKL Sbjct: 205 LERAGVIEQGRGKLT 219 >UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridia RepID=C9R9Q5_AMMDK Length = 229 Score = 90.3 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 15/212 (7%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLI 62 PL K + L GT + ++++ + + +++ +G + + R V + Sbjct: 15 PLYLNEKEKELLRSLGTTVSYPKG-HILWAPEEIADRVYLLEKGWVKIYRLTANGREVTV 73 Query: 63 GITQ-APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLA 120 G + ++GLA+ L + + T + + L+ +N L LA Sbjct: 74 GAIRNPGELIGLAEALYHGRRTCFAGAITDVTLTIVSKNDFVELLTENHLLALKVCKILA 133 Query: 121 WQNRILELRDVQLIGHNSYEQIRATLLSMIDWN---EELRSRI---GVMNYIHQRTRISR 174 + R E +L+ ++ LL M + +E I + +R Sbjct: 134 ARMREAEALVHELVCWQVPGRLALLLLKMGESCGIRDEKGIHIELRLTHEELAGMIGTTR 193 Query: 175 SVVAEVLAALRKGGYIEMNKGKLVAINRLPSE 206 V + +K G IEM K+ + P + Sbjct: 194 QTVTSLSNTFKKEGSIEMVGRKITICD--PQK 223 >UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAF8_SPHTD Length = 252 Score = 90.3 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 69/206 (33%), Gaps = 17/206 (8%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLI 62 P E ++ S G + ++ + +V+ G + L R +NVL+ Sbjct: 38 PPAEIDRISLHFSERG-----YQPGETVYLAGEPATRLYVVAVGKVKLVRPTPAGQNVLL 92 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAW 121 I G L + P ++ C + A Q ++ + +A Sbjct: 93 DILTPGDFFGSLATLGDREYPNTAEAQTACCLLSVDADQFAEILRAYPTVALATLEIVAE 152 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLSMID------WNEELRSRIGVMNYIHQRTRISRS 175 + R L H ++ ATLL + D + L + + T + Sbjct: 153 RLRDAHEVIEHLSAHPVEARLAATLLKLADRLGEESEHGLLIQMPLSRQDLAEMTGTTTE 212 Query: 176 VVAEVLAALRKGGYIEMNKGKLVAIN 201 + VL+ R+ G I + + VAI Sbjct: 213 TASRVLSEFRRAGLIR-SGRRWVAIT 237 >UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP24_9BACT Length = 234 Score = 90.3 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 24/202 (11%), Positives = 68/202 (33%), Gaps = 14/202 (6%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGI 64 E K+ + + +K++IFS E F +L G + + + ++ + Sbjct: 19 DETEKILSI-----SILKKARKKEIIFSDGEVGEGFFAVLRGRVRVYKMSEEGREVILHV 73 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQN 123 G + P + + P + + L+ + + L+ + Sbjct: 74 CGPGDHFGQVSMFAGKNYPAWAQAMSDSKLLLFPRRAFLDLLSREPQIAMSMMSGLSSKM 133 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDW---NEELRSRIGVMNYIHQRTRISRSVVAEV 180 R L L+ L ++ + L+ + + L I + + ++ + Sbjct: 134 RELTLQVESLALKEVPGRLASYLIMLAEEKKSPGSLHLDIPKWQ-LASVLGTTPETLSRI 192 Query: 181 LAALRKGGYIEMNKGKLVAINR 202 + + G I++++ + ++ Sbjct: 193 FSDMTDRGLIDLDRRDVTLLDH 214 >UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBG9_FLAJ1 Length = 227 Score = 90.3 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 63/186 (33%), Gaps = 10/186 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKND 81 + + Q IF+ F I G + + +N +I I + G L + Sbjct: 31 KKYVKNQTIFTEGTLPTGIFYIQTGKVKKYKVDNEGREQIIYIYNSGEFFGYTAILSEQA 90 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNRILELRDVQLIGHNSYE 140 + N +P ++ + ++ R L+++ ++ L E Sbjct: 91 YGDTAVVIENSVISFIPKDDFFNVLNNSVVFSRLLLKCLSYEFSVMANLMAVLSQRTVRE 150 Query: 141 QIRATLLSMIDW---NEELRSRIGVMN--YIHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 ++ +LL + D N++ + ++ + +A VL + I M Sbjct: 151 RVALSLLILHDKYKINDDPKDVFITLSRGDLANMVGTVNETLARVLHDFKSENLIWMEGR 210 Query: 196 KLVAIN 201 K+ +N Sbjct: 211 KIQLMN 216 >UniRef50_A5ER25 Putative Cyclic-AMP receptor-like protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ER25_BRASB Length = 235 Score = 89.9 bits (222), Expect = 5e-17, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 14/194 (7%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LI 62 P K+ G + Q +F + F + +G I L +V ++ Sbjct: 21 PKAFLDKI-----CAGQKVLRVPRGQSVFVQGDPADTLFFLQQGKIKLAVVNDVGKEAVV 75 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAW 121 GI A G + + +C + IT + ++ +L +L Sbjct: 76 GIVAAGQFFGEGCLTRQALHNGSACALQDCVVIAIARNTIITALRRHAELAEMFIAFLLA 135 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGV----MNYIHQRTRISRSVV 177 + E + + H+S +++ LL+M ++ + + + + +RS V Sbjct: 136 RIGRFEADLIDQLFHSSEQRLARLLLTMANYGRGGTPQPIIPKISQETMAEMIGTTRSRV 195 Query: 178 AEVLAALRKGGYIE 191 + + RK G IE Sbjct: 196 SHFMNKFRKAGLIE 209 >UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C1XIJ9_MEIRU Length = 225 Score = 89.9 bits (222), Expect = 5e-17, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 11/202 (5%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLI 62 P Q ++R ++IF + +++ G + + R + Sbjct: 18 PPQAIE-----VAREAFVTRNYPAGKLIFEAGDMGAALYIVQSGQVRIYRTYLDGRERMF 72 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAW 121 + G L + + L +L+ + + + LA Sbjct: 73 AYLGPGEVFGEMSLLDDQPRSASAETTVDSVLLVLYQDAYWSLVRKWPEILHNLATILAR 132 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLSMI-DWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 + R +L L + ++ L + + + Q + SR V V Sbjct: 133 RLREADLELEVLSFEEARGRVAYALTKLRKQRYGDGLKMKLTHQELAQLSGTSRETVTRV 192 Query: 181 LAALRKGGYIEMNKGKLVAINR 202 L ALR+ +++ G + ++ Sbjct: 193 LHALREEELVKVGSGYVEILDP 214 >UniRef50_Q125U4 Transcriptional regulator, Crp/Fnr family n=7 Tax=Burkholderiales RepID=Q125U4_POLSJ Length = 225 Score = 89.9 bits (222), Expect = 5e-17, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 10/179 (5%) Query: 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGL 77 + I + +IL G + + V++ +G + Sbjct: 31 AVVKRRFKRGEAIVEQGKKSNALSIILTGRARVITTDTRGREVILATMHPGDYVGEMSLI 90 Query: 78 MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGH 136 + +E L + + +N + L + R + + L Sbjct: 91 DNEPHSATVCAEVQTDALILGQPEFARCLPENSSMAYAVLKGLVQRLRHADRKIESLALM 150 Query: 137 NSYEQIRATLLSMIDWNEE----LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 + Y ++ LL + E +R ++ + + + SR +V+ V+ L + G+IE Sbjct: 151 DVYGRVARALLEFASEDGEGNAVIRDKVSRQD-LAKMVGASREMVSRVMKDLEERGFIE 208 >UniRef50_A5FCJ9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ9_FLAJ1 Length = 211 Score = 89.6 bits (221), Expect = 6e-17, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 9/185 (4%) Query: 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGL 77 G + + VIF + + ILEG + + ++ IGI G Sbjct: 25 GAVAKKVPKHAVIFFENDPPLSYYQILEGTVKMSYTNEDGKDLTIGIFNEGNSFGEPPLF 84 Query: 78 MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGH 136 ++ P ++ +C L +L+E+N + AW+ + +I H Sbjct: 85 IEQPYPASAEAQTDCVILKLSKTNFFSLLEENPEIQSRVLKLFAWKIYNKIVFSKNIINH 144 Query: 137 NSYEQIRATLLSMIDWNEELRSR----IGVMNYIHQRTRISRSVVAEVLAALRKGGYIEM 192 +I+ L ++ + S+ I T + V ++ + K IE+ Sbjct: 145 KPEYRIQYFLDNLKRQHNSKPSQKMKIPYTRQEIADFTGLRVETVIRTISLMNKNKKIEI 204 Query: 193 NKGKL 197 KL Sbjct: 205 IDHKL 209 >UniRef50_C6PP44 Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PP44_9CLOT Length = 216 Score = 89.6 bits (221), Expect = 6e-17, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 64/185 (34%), Gaps = 7/185 (3%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR--REENV--LIGITQAPYIMGLADGLM 78 Q+I+ ++ + + EG++ + + + ++ I + I G A Sbjct: 25 KPARIFKNNQLIYQQGEIADNFYYLKEGIVQVFVNSSDGLEKILTIYKNGEIFGEASFFD 84 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 + + + ++ ++ L + L+ + R+L + + Sbjct: 85 GFPRMSSAKTLSDSEIITINKTDIMSYFQKEPFLALNFIELLSQKVRMLSNEIDNISFLS 144 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 + ++I LL M + I + +SR V+ L K ++ K+ Sbjct: 145 AEKRIAQYLLRMNRY--TSYPINCTHEDIGKSVGVSRITVSRTLNKFSKYKWVYTKYKKI 202 Query: 198 VAINR 202 + +N+ Sbjct: 203 LILNK 207 >UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWX5_9SPHI Length = 236 Score = 89.6 bits (221), Expect = 6e-17, Method: Composition-based stats. Identities = 21/186 (11%), Positives = 60/186 (32%), Gaps = 10/186 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKND 81 + VIF F I G + + + ++ ++ + A +G + Sbjct: 39 NLYRKGDVIFHEGNYPLGLFSIFSGKVKVFKTSETGKDHILRLAGAGEPLGYRSLVSGEK 98 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIE-QNQLWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 + +P + ++ + L +L ++ E + L E Sbjct: 99 YEVSAAVLEDTRVCFIPKALFLNTLQGSSNLTGRVMEFLTKDLKLAESKIADLAQKTVKE 158 Query: 141 QIRATLLSMID----WNEELRSRIGVMNY-IHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 ++ T+L + ++ + + + + + L+ +K I++ Sbjct: 159 RVAETILMLKQFYGMESDHKTINVSLSREDLANLVGTATETLIRSLSEFKKNEIIDLKGK 218 Query: 196 KLVAIN 201 K++ +N Sbjct: 219 KIIILN 224 >UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJM6_HALO1 Length = 251 Score = 89.6 bits (221), Expect = 7e-17, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 57/195 (29%), Gaps = 14/195 (7%) Query: 15 DKCLSRYGTRFEFNN--EKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAP 68 + R + + D E F+I+ G I + V + I + Sbjct: 39 ISAIEDLSQRVAVRKVTAHHTVVTQDEPGETMFLIMSGRIKVVIFGENGREVTLSILRPG 98 Query: 69 YIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRILE 127 G ++ CT L + + + + + +A + R + Sbjct: 99 DAFGEMSLFDGEARSANCVALEACTLLALSREDLLRHLANHPRTTLNLLGEMARRLRRAD 158 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDW------NEELRSRIGVMNYIHQRTRISRSVVAEVL 181 QL + E++ L+S+ L R + R ++ Sbjct: 159 ESIAQLALCDVNERLVHQLVSLAREEGVDAPEGVLVRRRPTQQELANMIGSCRETISRAF 218 Query: 182 AALRKGGYIEMNKGK 196 L + G I + +G+ Sbjct: 219 NQLARDGLI-IPRGR 232 >UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNX8_DESBD Length = 227 Score = 89.6 bits (221), Expect = 7e-17, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 12/202 (5%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLI 62 P E + L R EF+ ++F +V+ G + + + ++ Sbjct: 17 PEDELRQ----LERISEPREFDKGD-ILFLEGREGVGFYVVAAGQVKVFKMSFDGREQIL 71 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAW 121 I +G P + + Y P ++ I L ++ L + L+ Sbjct: 72 HILGPGDPLGEVPVFAGQTYPANAQALVKSSLYFFPRQKLIELYRESPSLAMNMLAVLSR 131 Query: 122 QNRILELRDVQLIGHNSYEQIRATLL-SMIDWNEELRSRIGVMN-YIHQRTRISRSVVAE 179 + R + L +++ LL R ++ V + S+ ++ Sbjct: 132 RLREFTVLIENLSLKEIPQRLATYLLHQQSLKPVSARVKLSVTKGVLSNILGTSQETLSR 191 Query: 180 VLAALRKGGYIEMNKGKLVAIN 201 VL L + G I++ ++ +N Sbjct: 192 VLGKLSQEGLIDVQGKEISILN 213 >UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Peptococcaceae RepID=B8G1C8_DESHD Length = 223 Score = 89.2 bits (220), Expect = 7e-17, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 13/199 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAP-Y 69 + + GT + Q+IFS + + + EG + + R V +G ++P Sbjct: 17 VGHIVQSGTIVRYKKG-QIIFSESDAADRVYFVKEGYVRIFRITQYGRRVTVGCIRSPGQ 75 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILEL 128 +MGLA+ L D + + T + +Q + L+E++ + LA + R E Sbjct: 76 LMGLAETLYGGDRTCFASAIDDVTIVVIRHQQFLDLLEKHPAIAIKVTITLAIRMREAEG 135 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLA 182 +++ ++ L+ M R I SR V +L Sbjct: 136 IIEEMVCFQVPGRLAQLLIKMAKRAGMETPRGTKISFRLTHEDIAYMIGTSRQNVTSLLN 195 Query: 183 ALRKGGYIEMNKGKLVAIN 201 + I + +L ++ Sbjct: 196 TFKYENSIAIEDKELYILD 214 >UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 Tax=Desulfotalea psychrophila RepID=Q6AL49_DESPS Length = 222 Score = 89.2 bits (220), Expect = 8e-17, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 62/181 (34%), Gaps = 6/181 (3%) Query: 28 NNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDIP 83 +F ++I+ G + + + + ++ I + G A P Sbjct: 33 VKRGTSLFFEQDPGNGFYLIVSGRVKVYKISAGGKEQILHILKDLETFGEAAVFQGKPFP 92 Query: 84 YKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQI 142 S + + P ++ ++LIE+N L + A + R + L ++ Sbjct: 93 ANGESLVDTELLYFPREKFVSLIERNSQLALNLLAIFATKLRKFTRQVEALSLQEVPHRL 152 Query: 143 RATLLSMIDWNEELRSRIGVMN-YIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 LL + + + L R+ + + + ++ + G I ++ + ++ Sbjct: 153 AKYLLLLTEEQDSLSLRLEISKGQLASLLGTAPETLSRIFGQFASEGIIVIHGRAIEVVD 212 Query: 202 R 202 + Sbjct: 213 K 213 >UniRef50_UPI0001850701 cAMP-binding domain-containing protein n=2 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850701 Length = 229 Score = 89.2 bits (220), Expect = 8e-17, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 11/180 (6%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLM 78 T + + I S F++ G + L R + + I + G L Sbjct: 29 TLAKPIKKGTFISSPSAPLSALFLLKFGQVRLYRMNSTGKQFTVDILTDGNVFGETSTLT 88 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 D + + +C L K L+E+N + L+ + L ++ + Sbjct: 89 LTDNDLYIEAMTDCYLCVLGKKDFEELLERNPTIALKFISILSQRLTELYSLTEKIALAD 148 Query: 138 SYEQIRATLLSMIDWNE------ELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 +I L+ + + + I SR + +++ L+K G I+ Sbjct: 149 VKYRILYLLVKLSEKTGIRKKDWQSIKLRLTHQDIANMVGSSRETTSSIMSQLKKEGVIK 208 >UniRef50_B8ID71 Transcriptional regulator, Crp/Fnr family n=11 Tax=Rhizobiales RepID=B8ID71_METNO Length = 230 Score = 89.2 bits (220), Expect = 8e-17, Method: Composition-based stats. Identities = 21/194 (10%), Positives = 64/194 (32%), Gaps = 10/194 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYI 70 + ++R + +V+F + + + + G I + + + + + Sbjct: 27 LQAVARLCVTRSLAPQ-EVLFQKNDPADALYAVRRGEIRIATGTAEGRQLTLNLLGPGDV 85 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G L + ++ + + + + L+ Q + L + R + R Sbjct: 86 FGEVALLDGHPRTADAVATEPTELFVIRRRDLLDLLSQQPEVAIALIELLCKRVRWMSER 145 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSRI-GVMNYIHQRTRISRSVVAEVLAALRKGG 188 + + + ++ + I + SR V L A ++ G Sbjct: 146 MEETNFLPVPAR---LARRLAALADDYGNEIQATQEELAVFANTSRETVNRQLQAWKRDG 202 Query: 189 YIEMNKGKLVAINR 202 +++ +G++ ++R Sbjct: 203 IVQLARGRIRLLDR 216 >UniRef50_A8UU26 cAMP-dependent transcriptional regulator n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU26_9AQUI Length = 228 Score = 88.8 bits (219), Expect = 9e-17, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 10/170 (5%) Query: 32 QVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGLADGLMKNDIPYKLI 87 +V+F + D ++++EG + +++ +G + +I Sbjct: 41 EVLFYEKDESSDMYLVIEGKVRASLFDEHGNELVLAELGPGEFLGEMSMIDGLPRSATVI 100 Query: 88 SEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSYEQIRATL 146 +E L + + ++ +N + L + R + L N +I L Sbjct: 101 AEEPTKLAVLSREAFLKILRENPDMSVNVIRALVARLRRTDDMVEALAFRNVESRIVKFL 160 Query: 147 LSMID-----WNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 L + + + + R + R SR V + L AL G IE Sbjct: 161 LEVGRERGVMESGKFKVRKMTHRDLASRVGSSREAVTKALKALTFKGVIE 210 >UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Tax=Desulfovibrionales RepID=Q30Y06_DESDG Length = 248 Score = 88.8 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 9/181 (4%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKNDIPYK 85 + Q+IF E +++L+G + + + ++ + A G + P Sbjct: 56 KGQIIFVEGTRAEGLYIVLDGRVKIFKTAPDGREAVMHVFGAGEPFGEVAVFQNDVFPAN 115 Query: 86 LISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRA 144 ++ LP + + I Q+ L + L+ + R+ + L +++ A Sbjct: 116 AMAVEQSRVLFLPRRGIVDRIAQDPSLAMNMLAALSRKLRMFTRQVEALTLKEIPQRLAA 175 Query: 145 TLLSMIDWNEE---LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 LL + +R + + + +R ++ LA L + G I M + + Sbjct: 176 YLLHLSVKKGHKDVIRLDVS-KSLLAGVLGTARETLSRALAKLVETGAITMEGRTITITD 234 Query: 202 R 202 R Sbjct: 235 R 235 >UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridiales RepID=A8MIN6_ALKOO Length = 229 Score = 88.8 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 55/180 (30%), Gaps = 11/180 (6%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLM 78 T + + +IF E + I G I + + ++ I + Sbjct: 31 TIEKNLRKGTIIFMEGDKGEAFYFIKSGKIKIYKTTPDGRELIFAILSHGDVFAEVALFN 90 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHN 137 P + + + LI +N ++ + + + + +L + Sbjct: 91 DVAYPAGAEVLEDACIGTIRNEDLEELIRKNAEIALHIIKEFSKKLYNSQQKVKELALGD 150 Query: 138 SYEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 +Y + T+L + N + S + +R V+ L+ +K G I Sbjct: 151 TYARTAQTILKLAKSNGKETSEGIEIHLDISRQELANLIGTARETVSRALSQFKKEGSIH 210 >UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Leptospirillum sp. Group II RepID=A3EW66_9BACT Length = 237 Score = 88.8 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 60/190 (31%), Gaps = 12/190 (6%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMK 79 R Q I + FVI+ G + + E+ +++ I G L Sbjct: 35 RLRHYRSGQKIIQEFDRGMELFVIVSGSVKISTEDVEGREIIVSIAYPSDFFGEIALLDD 94 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNS 138 + + + T + + + + + R + + + + +S Sbjct: 95 DTRSATVTAIEPTTVLSIEKNDFLRFFVAYPEFALRMLAVMGQRIRKTDEKLIHMAFADS 154 Query: 139 YEQIRATLLSMIDWNE-------ELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 + +I TLL++ + + + +SR V+ L A + I Sbjct: 155 FAKIARTLLTIYEKEGVQANGSLPYIHDRFTRQELASLSGVSRETVSRSLGAFIQAELIR 214 Query: 192 MNKGKLVAIN 201 + ++ +N Sbjct: 215 IADNRIYILN 224 >UniRef50_B8G2Z1 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8G2Z1_CHLAD Length = 222 Score = 88.8 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 20/210 (9%), Positives = 64/210 (30%), Gaps = 16/210 (7%) Query: 9 QEFGKLDKCLSRYGTR-------FEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----E 57 Q +L L + + + F++ +G + + + Sbjct: 5 QHLLRLFPDLDPAAQADLAALWQVATYPAGHIFHLPNEVGQHVFLLQQGRVRIYKLSAEG 64 Query: 58 ENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAF 116 + + + P + G + + +C + + + + + Sbjct: 65 RALTLLVLNPPSLFGEMTLVGSGTYDTCAEAMTDCVVAQIDRETFRDFLNRYPGAALNLM 124 Query: 117 YWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG----VMNYIHQRTRI 172 + + R +E R + + +++ A LL + + E + + + Sbjct: 125 ELMGSRLRTMEQRLADIAFKSVPQRLAALLLDLAGDSVEEAAPATLVRYTHQQLAEMIGA 184 Query: 173 SRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 R V + L +R+ I ++ ++ ++ Sbjct: 185 YRETVTKALGDMREANLIRIDDETIILVDP 214 >UniRef50_B1MBG6 Putative transcriptional regulator n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MBG6_MYCA9 Length = 232 Score = 88.4 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 50/180 (27%), Gaps = 11/180 (6%) Query: 31 KQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIPYKL 86 +VIF + +++ +G ++L R L + + G + Sbjct: 34 DEVIFRPGDPGDRMYLVTQGKVALSRRSGDGAERLATLVGPTEMFGELSIFDPEPRRSEA 93 Query: 87 ISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRAT 145 + + I + LA Q R + + + ++ A Sbjct: 94 RALTAVAARGMDRDTMRWWIAHHSDAAEQLLRVLARQVRKATRKLADIPHADITARVAAQ 153 Query: 146 LLSMIDWNEELR------SRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVA 199 LL + + + SR + VL K G I+++ L Sbjct: 154 LLDLAQRFGTIEGDSVYVEHGLSQLELADLVGTSRESMCRVLHEFEKRGLIQVHGTSLTI 213 >UniRef50_A1B7P5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7P5_PARDP Length = 236 Score = 88.4 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 58/189 (30%), Gaps = 10/189 (5%) Query: 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVIS----LRREENVLIGITQAPYIMGLADGL 77 G+R + Q+I + +L G + R ++ G L Sbjct: 30 GSRRRHADRGQLIIERGEPGDSVLFVLSGHVLAVQWTRSGREIVYSEIAPGSAFGELSVL 89 Query: 78 MKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGH 136 L + C P L++ + + L + L R +L Sbjct: 90 SGMPRSLSLYARTACVLLETPGTLLTGLMDTQPQVRQAVIQDLVRRIHDLTERVQELTAL 149 Query: 137 NSYEQIRATLLSMIDWNEELRS-----RIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 + E++RA LL + + L + +R V+ LA L + G IE Sbjct: 150 DVEERLRAYLLRVSLEHGGLEPGRRMPDPPTHAEMANIIGANREAVSRALAKLSRAGIIE 209 Query: 192 MNKGKLVAI 200 + L + Sbjct: 210 SGRKYLRIM 218 >UniRef50_Q0K2Z3 Transcriptional regulator, CRP-family n=3 Tax=Cupriavidus RepID=Q0K2Z3_RALEH Length = 234 Score = 88.4 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 8/194 (4%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPY 69 + ++ R F + ++IF+ ++L G + + R + + Sbjct: 35 VLDAVANAARRLRFGDG-EMIFARGDPPTYFCMVLSGRVRMSRVSTGGRESVYSVIGRGR 93 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRILEL 128 G L + + GN L + ++ + + + + R+ Sbjct: 94 WFGEISLLDGKPRTHDAFAVGNTELMVLSQRDFHRILAAHPEGMQLIVQQICARLRVAFD 153 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGG 188 ++ A LL + D + + RI + + SR VA+ L A G Sbjct: 154 HAQSAAQAPIDARMAARLLELADRTDHV-VRISAED-LGDMVNRSRQTVAKYLQAWEDAG 211 Query: 189 YIEMNKGKLVAINR 202 I ++ ++ Sbjct: 212 LIRREYRQIELLDP 225 >UniRef50_A4A439 Transcriptional regulatory protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A439_9GAMM Length = 250 Score = 88.4 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 65/186 (34%), Gaps = 10/186 (5%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLM 78 +R + ++ ++ + +V+ G I + +++ G + L Sbjct: 37 SRQRDYSAREYVYKLGDPSSYCYVVESGRIRMCNYTADGHEIVMMEFFDGDCFGESSTLE 96 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 + + + + L ++ + R LA + R+ G Sbjct: 97 NLPRFNHACAVQDSRLSVISRDDFLLLYDKYPQIARSLNTMLAGRLRVAYGNAEDAAGLA 156 Query: 138 SYEQIRATLL----SMIDWNEELRSRIGVMNYI-HQRTRISRSVVAEVLAALRKGGYIEM 192 +++ +L S+ R G+ + + SR V+ L AL + G++E+ Sbjct: 157 LRDRVARLVLRRGYSLEADPRGHRVISGLSHEVVANMLGSSRQAVSRELKALERDGFLEL 216 Query: 193 NKGKLV 198 + GK+V Sbjct: 217 HYGKIV 222 >UniRef50_UPI0001850CBE Crp/Fnr family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850CBE Length = 230 Score = 88.4 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 70/186 (37%), Gaps = 13/186 (6%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKND-IPY 84 + +F + + + +G + + + + + +T ++G Sbjct: 26 KGSFLFREGSTANEVYFLQQGRMQISKVIPDGREISLRMTSEGDVIGDFTLFCGTSTHSM 85 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + NCT Y LP + +N L + W+ QNR E + LI H + Sbjct: 86 NCKALENCTVYSLPKSIFEQKLARNPELTIEWLKWVQLQNRRNETKFRDLILHGKKGALY 145 Query: 144 ATLLSMIDWNEELRSRIGVM------NYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 +T++ + + + V+ + SR VV +L L+K G + + KG Sbjct: 146 STIIRLANSYGKATPDGIVIDLPLTNQELANFCGTSREVVNRLLNELKKEGVLSLEKGY- 204 Query: 198 VAINRL 203 V ++RL Sbjct: 205 VTLHRL 210 >UniRef50_B1WWP9 Transcriptional regulator n=27 Tax=Cyanobacteria RepID=B1WWP9_CYAA5 Length = 243 Score = 88.0 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 16/203 (7%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLI 62 P + + + +VI + + IL+G + +R + V + Sbjct: 36 PEESLELVMSH-----AVIRTHPANRVILLENDWGGSVYFILDGWVKIRTHNVDGKEVTL 90 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAW 121 I ++G L + I+ T +P++ +TL+ + + +A Sbjct: 91 NIVGKGEVIGEMAALEEVPRSTDAITLTPTTISSIPSQDFVTLLHSDPIAGIRLAQVMAK 150 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGV-----MNYIHQRTRISRSV 176 + R + R L +S ++ TLL + + + S+ + + ++R Sbjct: 151 RLRQINRRLR-LREADSLSRVADTLLFLAEGQGKQTSQGIEIPNLPHRELSSISGLARET 209 Query: 177 VAEVLAALRKGGYIEMNKGKLVA 199 V L L K I+ L Sbjct: 210 VTRSLTKLEKKALIKREDDILCI 232 >UniRef50_B4RUQ2 Cyclic nucleotide-binding protein n=2 Tax=Alteromonas macleodii RepID=B4RUQ2_ALTMD Length = 229 Score = 88.0 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 11/188 (5%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMK 79 R + Q + + + + + EG + + +L + G Sbjct: 30 RLKHLKAGQQLHAKGEDGVGFYGVCEGRLRVVTVGVDGREMLFALLGPGTWFGEISMFDD 89 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNS 138 + E NCT + L+EQ L+ L + R G + Sbjct: 90 LPRTHDNFCETNCTVAIIQKNAFKALLEQYPELYPHFTRLLCTRVRSAFQFIDSSAGLSL 149 Query: 139 YEQIRATLLSMIDWNEELRSRIGV------MNYIHQRTRISRSVVAEVLAALRKGGYIEM 192 Q+ LL + + R + Q SR V ++L L G ++ Sbjct: 150 KHQLVKRLLMLTTSYGQHLPRNNAITLTLSQESLAQMINSSRQTVNQLLGELESEGLLKR 209 Query: 193 NKGKLVAI 200 + GK+ Sbjct: 210 HYGKITIP 217 >UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=Q3M891_ANAVT Length = 231 Score = 88.0 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 57/191 (29%), Gaps = 8/191 (4%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQ 66 + + L+ + + ++IF F++ G + + + + + I Sbjct: 24 LDEQLQALANIA-IVQTYKKGEIIFWEGDEGTGFFIVKSGRVKIFKVANGGKEQIFHIFG 82 Query: 67 APYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRI 125 A + P + N +P +T+++Q+ L LA R Sbjct: 83 AEEYFAEVPAFDGGNYPASAAALENSQVVFIPRSSFLTVLQQHPTLALAILGTLARHLRK 142 Query: 126 LELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMN--YIHQRTRISRSVVAEVLAA 183 L L +++ LL++ + + ++ L Sbjct: 143 LTHLVDTLSFQEVPQRLANYLLNLSKRLGNADVVELDLPKGQLAALLGTIPETLSRALYK 202 Query: 184 LRKGGYIEMNK 194 L + IEM Sbjct: 203 LAQEKIIEMEG 213 >UniRef50_UPI0001B54509 transcriptional regulator, Crp/Fnr family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B54509 Length = 220 Score = 88.0 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 14/193 (7%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLM 78 + + V+ ++L G + + V++G+ A ++G + Sbjct: 22 SVRKAYRRGDVLCREGEQASVVLLLLAGHVRITNATPDGREVVVGVRGAGEVIGELAVID 81 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL--WRDAFYWLAWQNRILELRDVQLIGH 136 + + +PA + + L + W LA + R + + + L G Sbjct: 82 GGRRSATVQALDELDVLVVPAARFVALCRREAAISW-ALVRVLADRMRDVGRQWLDLGGG 140 Query: 137 NSYEQIRATLLSMIDWNEELR------SRIGVMNYIHQRTRISRSVVAEVLAALRKGGYI 190 + ++ A L+ + + R + G + ISR A V LR+ G I Sbjct: 141 TTTRRVAAQLMQLAVQHGVKRGTDIEVAVPGTQAELAMTAAISRESWARVTRELRRQGVI 200 Query: 191 EMNKGKLVAINRL 203 +G+ V I+RL Sbjct: 201 STARGQ-VTIHRL 212 >UniRef50_B4RIS9 Transcriptional regulator(CAMP-binding) n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RIS9_PHEZH Length = 231 Score = 87.6 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 9/205 (4%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLI 62 P+ R R + +V+F + + + GV+ L ++ Sbjct: 20 PMGALNAELDAHLRARARRQRLGRGEVLFLRGSAPDALYCVDVGVVRLCVTSSSGREAVL 79 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAW 121 G+ + G A + ++ + +PA L++ + Sbjct: 80 GLVTPGHWFGEASLFTGEPRSHDALAVVDSELLAVPAAALHELVDGRPAYLLQFLRLMGL 139 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMN----YIHQRTRISRSVV 177 + R R ++ LL M + + GV+ + +SR + Sbjct: 140 RYRSTLERLDDAALQPLPVRLARKLLEMSRSDATATAGDGVLQISQEDLAHALGVSRQSI 199 Query: 178 AEVLAALRKGGYIEMNKGKLVAINR 202 +L G +++N LV + Sbjct: 200 NRILKRWEAAGVLQVNYRSLVLLKP 224 >UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IZ1_BACLD Length = 222 Score = 87.6 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 49/183 (26%), Gaps = 11/183 (6%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKND 81 + +F E F I G++ + + +I I Q + + Sbjct: 28 RTYQPRMFVFMEGEEREAVFFIKSGLVKAFKIDEDGNEQVISILQNGDMFPHVGFFDLSP 87 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSYE 140 P + + L+ + + + L+ R I + Sbjct: 88 YPATAEAVQETELIVIRIADFNELLMKFPEMTIKVMQIMGKKILDLQERIQGFISKDVQH 147 Query: 141 QIRATLLSMIDW---NEELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ L+ + +E I SR + L L+K + ++ Sbjct: 148 RLTHVLMKLAAEHGIPQEKGVYISLPITNQDFANMVGTSRETINRTLNELKKKNLLTADR 207 Query: 195 GKL 197 + Sbjct: 208 SGI 210 >UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Sphingomonadaceae RepID=Q2G6R8_NOVAD Length = 229 Score = 87.6 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 21 YGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADG 76 G F ++++ + + F++L G+ + +++ +A +++G Sbjct: 30 RGQVRTFKPGQELM-AQGEEGKTLFIVLSGLARVSMVAANGREIILDYAEAGHVLGEIAF 88 Query: 77 LMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGH 136 L + + + L +I++++ L R L + + Sbjct: 89 LDGGERTASVEAIEPVEALVLTRSAFAEIIDRHKGLS--LRLLKAMARRLRQNNAVIEAD 146 Query: 137 NSYE----QIRATLLSMIDWNEELRSRI---GVMNYIHQRTRISRSVVAEVLAALRKGGY 189 +Y R L M+ + +++ + +SR + L+A + G Sbjct: 147 RAYTSGPRLARFLLRLMMGEGSDAGAQLKIALSQGELGNFAGMSREQINRQLSAWAENGI 206 Query: 190 IEMNKGKLVAINR 202 + + G++ ++R Sbjct: 207 VALKGGRVTILDR 219 >UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW21_9BACT Length = 242 Score = 87.6 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 22/194 (11%), Positives = 69/194 (35%), Gaps = 12/194 (6%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGL 73 L+ + + +++ ++ + +++L G + + E+ + + + + G Sbjct: 38 LAIFSKIRRYRPGHRIV-EANEVGSEMYLLLSGSVKVSAEDPAGREITLAVLYSGDFFGE 96 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQ 132 + + +P + L+ ++ L+ + R + + + Sbjct: 97 VSLWDNRGRTATVETLEPSQVVSIPGPPLLDLMRESPDMAFRLLTTLSARLRETDAKLMH 156 Query: 133 LIGHNSYEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLAALRK 186 + +SY+++ +LL + L + + ++R V+ L A Sbjct: 157 MAYGDSYQKVARSLLEIYTKEGGLDGETPFIPDRFTRQELASLSGVTRETVSRSLGAFTM 216 Query: 187 GGYIEMNKGKLVAI 200 G I + K ++V + Sbjct: 217 AGVIRLEKDRIVIL 230 >UniRef50_UPI0001C31542 transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31542 Length = 226 Score = 87.6 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 12/198 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYI 70 L +G R F +V+F + + ++ G ++R V + + Sbjct: 17 IAELLSHGRRRTFAAG-EVVFHAGDPADCMHLVRSGRFAVRVSTEFGDVVTLNVVGPGDS 75 Query: 71 MGLADGLMKN-DIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILEL 128 G L + + + + L + LA + R L Sbjct: 76 FGELALLTPDAPRSATIAALEPAETLSVHEIDFRRLRSERPQTDAVLSQLLAARVRRLSE 135 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWN----EELRSRIG-VMNYIHQRTRISRSVVAEVLAA 183 + V+ + + ++R LL + EE + I + SR+ V +VL Sbjct: 136 QLVEALHLPADTRVRRRLLDVAAAYRGDGEEGGASIPLTQEELASLAGTSRATVNKVLRE 195 Query: 184 LRKGGYIEMNKGKLVAIN 201 + G +E+ +G+ ++ Sbjct: 196 EQAHGTLELTRGRTTLLD 213 >UniRef50_D2LTM0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTM0_BACS4 Length = 217 Score = 87.2 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 61/193 (31%), Gaps = 8/193 (4%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQA 67 K L + + +K ++F +V+ EG I + + E LI + Sbjct: 19 EKALSSLLKMSREKQL-KDKDILFLEGEQKSYIYVLGEGTILISKLTEDGEESLINVLSE 77 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRIL 126 + + P ++ + +P LI + + L Sbjct: 78 GEVFPHTGFFDHSPYPGSAKAKKDVIVLAIPINGFEKLIRTYPELSFRVIQVMNKKIIYL 137 Query: 127 ELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 + + +L+ N ++ + + + + + +R V+ L K Sbjct: 138 QKKLNELLSLNVEARLIGAIAHLQETQGDTIR--LTHQEMGNIIGSTRETVSRQLKKWEK 195 Query: 187 GGYIEMNKGKLVA 199 Y+++ K ++V Sbjct: 196 EQYVDIKKDRIVL 208 >UniRef50_B5YI76 Catabolite gene activator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YI76_THEYD Length = 224 Score = 87.2 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 11/190 (5%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYIMGL 73 L G E + IF + D ++IL+G + + +++ I + G Sbjct: 26 LISKGFSINKVKEGKFIFYQSEESTDLYIILDGAVKACLLDPEGKELILNIFKKGDFFGE 85 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQ 132 L +I+ + L +Q +TL++ N + L + R+ + Sbjct: 86 LSLLDGKPRSATVIALKDSVVGILKREQFLTLLKNNPMIAISLLSALVERIRMTDEMLGA 145 Query: 133 LIGHNSYEQIRATLLSMIDWNEE------LRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 + + +I +L++ E ++ + T SR V + L L+ Sbjct: 146 MAFLDVSRRILKYILNIAQKEGEKTEEGYIKINKITHRELASCTGASREAVTKALKILKF 205 Query: 187 GGYIEMNKGK 196 G I G Sbjct: 206 KGIIFEKNGH 215 >UniRef50_A1ZKJ0 Cyclic nucleotide-binding domain protein n=4 Tax=Bacteroidetes RepID=A1ZKJ0_9SPHI Length = 227 Score = 87.2 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 69/189 (36%), Gaps = 11/189 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQA----PYIMGLADGLMKN 80 FE N+ ++ + ++I++G + + I +A + G L ++ Sbjct: 32 FEQYNKNDFVYLDQDQADKVYLIIKGKVKISSYTEDGEEIVKAILTKGEVFGELAALGES 91 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSY 139 + T + + TL++ Q + + + + W+ + LE R L+ ++ Sbjct: 92 HRNDYAQAVAATTICAVDTQTLQTLLKNQQEFSLNIYKLVGWRIKKLEHRLSLLMFKDAR 151 Query: 140 EQIRATLLSMIDWNEELR------SRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMN 193 ++ L ++ E + + + I +SR + +L L+ G ++ Sbjct: 152 TRLIEFLKNLGSEQGEAKGNTIEINHLLTQKDIADLIGVSRPTLNSLLNELKSEGMVDFQ 211 Query: 194 KGKLVAINR 202 + + Sbjct: 212 RKVIRLYKN 220 >UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LV90_SYNAS Length = 249 Score = 87.2 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 64/212 (30%), Gaps = 16/212 (7%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNN---EKQVIFSSDVNNEDTFVILEGVISLRRE 57 ++ ++K + F + R+ + +++F F+I G+I + Sbjct: 26 VIDLLKAIPLFESFNNSELRHLASLLKGQSLDKGEILFHKGDTGSAFFIIANGLIRISVS 85 Query: 58 ----ENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTIT-LIEQNQLW 112 + V + G L + + + T Y L L E Sbjct: 86 NKAGDEVTFAHLRGGDFFGEMALLDEQTRSADATALEDSTLYVLDRNDFFPFLFENENAV 145 Query: 113 RDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGV-------MNY 165 L+ + R + + ++ LL + +L R Sbjct: 146 HSILRALSMRLRRTDDILAETAFLTVSSRLARRLLELA-EPSQLSGRESAEYQVRMSQRE 204 Query: 166 IHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 + ++R + + L L+ G I ++G + Sbjct: 205 LGAMPGVTRESINKELKILKDRGIITTSRGNI 236 >UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C034_DESAD Length = 226 Score = 87.2 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 17/213 (7%) Query: 5 VKPLQEFGKL----------DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL 54 +K + E K+ + L + E +Q IFS+ + + I G + + Sbjct: 1 MKKIHELNKISLFAGLSAEQLEKLEQIVVPRELKKGEQ-IFSAGGDATGFYSIKSGKVKI 59 Query: 55 RR----EENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ 110 R + +I I A I G P ++ + P +I ++ Sbjct: 60 YRESLAGKEQIIHIFGAGEIFGEVPVFQGACYPASSVTLAKSKLLYFPRDSFERVIREDP 119 Query: 111 -LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSM-IDWNEELRSRIGVMNYIHQ 168 L L+ + R L + L ++ + LL + N + I Sbjct: 120 DLAMSMLALLSGRLRQLVNQVAALSLSEVPARLASYLLLLKSTQNSNILELDLPKGLIAS 179 Query: 169 RTRISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 + ++ V + + G I++ + + I+ Sbjct: 180 YLGTIQETLSRVFKKMSEQGLIKVERKTIEIID 212 >UniRef50_Q5LL23 Transcriptional regulator, Crp/Fnr family n=1 Tax=Ruegeria pomeroyi RepID=Q5LL23_SILPO Length = 233 Score = 87.2 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 68/195 (34%), Gaps = 11/195 (5%) Query: 13 KLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAP 68 ++ + + + V+ + + +V++ G + + V A Sbjct: 28 EILSRFAADLELVTVHTGQTVM-EQGETSTEMYVVVRGRLVGLLLSPNGKEVAFTEITAG 86 Query: 69 YIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILE 127 G L + + +PA++ + + + L + LA +NR+L Sbjct: 87 RYFGELSALDGRPRSLTISAAETTVLARMPAQRLLDWMAREPRLAHNLAIDLAERNRVLT 146 Query: 128 LRDVQLIGHNSYEQIRATLLSMID-----WNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 R L+ H+ +++RA L+ + + I +R V+ V+A Sbjct: 147 ERVFGLVVHDVDKRVRALLIQQAQAARQLKPGGVLDPSPTHDAIANYIGATREAVSRVMA 206 Query: 183 ALRKGGYIEMNKGKL 197 L G IE + +L Sbjct: 207 RLSAAGVIETGRRRL 221 >UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M7L2_SALAI Length = 237 Score = 86.9 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 61/200 (30%), Gaps = 13/200 (6%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQA 67 L ++ +V+F + + +L G + L ++ I Sbjct: 24 ESLLAAVAVDARERRLLRG-EVLFRAGELCSAFYCVLSGQVKLTVAGGGGGEKVLEIVAP 82 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW-LAWQNRIL 126 A P ++ + ++ LI Q+ + ++ + L Sbjct: 83 GETFAEALMFGHRPYPVTAVALSATRLLVVGSRTVHDLIAQDPDFARLMLVGMSVRLHRL 142 Query: 127 ELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVM-----NYIHQRTRISRSVVAEVL 181 + + ++ E++ LLS+ E + V + R +S + L Sbjct: 143 VRQIASVSLSSAAERVADLLLSLAG--PEAGESVVVELPAGKAVLASRLNLSPEHFSRTL 200 Query: 182 AALRKGGYIEMNKGKLVAIN 201 L G I + ++ ++ Sbjct: 201 RDLADTGLIRVEGRRVAVLD 220 >UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax=Deltaproteobacteria RepID=Q2LPZ1_SYNAS Length = 229 Score = 86.9 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 63/187 (33%), Gaps = 7/187 (3%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLM 78 R F ++ + IF+ +++ G + + + + ++ I + G Sbjct: 29 ARDRFYDKGKEIFAEGDEGGGFYIVASGQVKVFKLSPEGKEHILHIYGPGHSFGEVPVFS 88 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 P + P + L+ N L + L+ + R ++ L Sbjct: 89 GERFPASAETLLKSHLLFFPRTDFVALLSGNPSLCMNLLADLSLRLRQFTIQIENLTLKE 148 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVMN--YIHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 ++ + LL++ D + S ++ + ++ + + G IE+ Sbjct: 149 VPGRLASYLLTLSDEEGQGNSLSLNISKGQLAGLLGTIPETLSRIFLKMNNAGLIEVKGK 208 Query: 196 KLVAINR 202 ++ ++R Sbjct: 209 EITILDR 215 >UniRef50_B6IT06 Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum SW RepID=B6IT06_RHOCS Length = 232 Score = 86.9 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 11/195 (5%) Query: 17 CLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMG 72 LSR + F+ ++Q++ S + + F++ EG + + + +A +G Sbjct: 25 ALSRQCSWRHFHAQEQIVDRSSESRDVCFIV-EGRVRVVNYSLSGREITFDDIEAGGYLG 83 Query: 73 LADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL-WRDAFYWLAWQNRILELRDV 131 + +++ + + + Q+ LA R R + Sbjct: 84 ELSAIDGEPRSASIVALTETQVAFMSPRLFLETATQHPAVALLVMRRLARIVRSATGRIM 143 Query: 132 QLIGHNSYEQIRATLLSMID-----WNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRK 186 L + ++ A LL + N + + + N I R +R VA V + L + Sbjct: 144 DLSTLGANNRVHAELLRLAKPDLRPDNTAEITPVPIHNDIASRVSTTRETVARVFSDLAR 203 Query: 187 GGYIEMNKGKLVAIN 201 G +E LV ++ Sbjct: 204 DGILERRGNHLVILD 218 >UniRef50_A4V7K8 Putative cyclic amp receptor-family protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7K8_PSEFS Length = 215 Score = 86.9 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 13/195 (6%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE-----NVLIGITQAPYIMG 72 + G R +F ++ F++ EG +++ + + I + G Sbjct: 18 FTASGKRQKFARGSTLMRFDSDEPC-VFLLTEGTAAIQVTDHSQVSELNIAHLIPGDVFG 76 Query: 73 LADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILELRDV 131 + N I ++++ C Y L AK+ + L L+ + + Sbjct: 77 SIEPGEGNKIEMYVLAKSECFAYVLTAKELLQACASQPLAMFGLCRELSRTSVRSLRKVG 136 Query: 132 QLIGHNSYEQIRATLLSMIDWNEELRSRI-----GVMNYIHQRTRISRSVVAEVLAALRK 186 Q ++ ++ + L+ + + I +R +V +V+ L + Sbjct: 137 QFAFYDVRGRVSSALVELCSLPGAISHPEGYVLKNTRVEIASMVGCTREMVGKVMKELSE 196 Query: 187 GGYIEMNKGKLVAIN 201 G I + +G+ ++ Sbjct: 197 EGLISI-RGRQTLVH 210 >UniRef50_A1ZR18 Transcriptional Regulator, Crp/Fnr family, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZR18_9SPHI Length = 250 Score = 86.9 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 68/218 (31%), Gaps = 18/218 (8%) Query: 2 LSVVKPLQEFGKLDKCLSR--------YGTRFEFNNEKQVIFSSDVNNEDTFVILEGVIS 53 + V K + K+ LS F K ++F + F+I G Sbjct: 22 IDVEKFNFQSDKILSSLSPEERKMFLSVAYPLTFKKGK-LVFYEEGIPTGVFIIESGRAK 80 Query: 54 LRRE----ENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQ- 108 + + ++ + I + ++G L + +C + ++ L+ Q Sbjct: 81 IFKTGLDGKDQIFYIYKQGDLLGYHALLCNEKYADSCEALEDCQMLFINQRKFEQLLTQI 140 Query: 109 NQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVM----N 164 L ++ + ++ L E++ LL + E + G + Sbjct: 141 PHLQALLIQNMSHEFGVMVNTITVLAQKPLRERLALFLLLLEQKYSETTGKPGKIVLPRE 200 Query: 165 YIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 + +R + +L R+ I + + IN Sbjct: 201 DLANIVGTARESLGRLLKEFREEKLILIENKAITLINP 238 >UniRef50_C5CIJ4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIJ4_KOSOT Length = 224 Score = 86.5 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 72/182 (39%), Gaps = 6/182 (3%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE--NVLIGI--TQAPYIMGLADGL-M 78 R E + + + +D ++L+G + ++ ++ I AP ++ Sbjct: 32 RIEKYKAGEFVRFRGDSCDDLLILLDGKVKTEMQDFNGKVVRIEVMDAPSLLASGFLFAT 91 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHN 137 N P +I+ +C+ +P K I L +N+ + + + + L + L Sbjct: 92 DNVFPVDVITITDCSFLTIPKKSVINLCRKNEKFLLNLLQDMGDRLVFLSEKLYMLTLRT 151 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 E+I +LS+ + S + Q ++R ++ A L + G +EM+ K+ Sbjct: 152 LKEKIADYILSLCKDKQCEVSVPLTKEELSQVFGVARPSLSRAFADLARDGILEMDGRKI 211 Query: 198 VA 199 + Sbjct: 212 II 213 >UniRef50_A4VU00 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=11 Tax=Streptococcus RepID=A4VU00_STRSY Length = 232 Score = 86.5 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 74/204 (36%), Gaps = 17/204 (8%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGI 64 F +L K + RF + Q+ F ++ + FV+ +G + + + + Sbjct: 23 DSFDQLAKHI-----RFRKIPKGQIFFYAEDPRDYLFVLYKGYARIEQYDETDSFTYLDY 77 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQN 123 + D Y I+ + + +P TL + N L+ Sbjct: 78 IRQGGAFPFGDMFQDKPYHYTAIAITDLEYFIVPMVLFETLSKINPSQMAYICQKLSKVL 137 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVM------NYIHQRTRISRSVV 177 R ELR + + +++ L +++ W+ R + + I + +R V Sbjct: 138 RFQELRLRNAMRSKASDRVVQAL-ALLYWDMCQREQFATLPFEIHIQEISRLAATTRETV 196 Query: 178 AEVLAALRKGGYIEMNKGKLVAIN 201 + VL L++ G I + +L ++ Sbjct: 197 SHVLKQLKQDGKIAYSHKQLTYLD 220 >UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Tax=Actinomycetales RepID=A4TDK3_MYCGI Length = 225 Score = 86.5 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 58/203 (28%), Gaps = 14/203 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYI 70 L + F +V F+ + ++I G + L+ + + Sbjct: 19 VAALCSQLQKVSFPRGHRV-FNEGDLGDTLYIITSGRAKIGCTSPDGRESLLTLMGPSDM 77 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G + + + I + + LA + R Sbjct: 78 FGELAIFDPGPRTSSVTALTALHAVMMDRDALRFWIAERPEIAEQLLRVLARRLRRTNDA 137 Query: 130 DVQLIGHNSYEQIRATLLSMI-----DWNEELR-SRIGVMNYIHQRTRISRSVVAEVLAA 183 LI + ++ LL + LR I Q SR + + LA Sbjct: 138 LSDLIFTDVPGRVAKQLLDLARRFGVQQEGSLRVDHGLTQEEIAQLAGSSRETINKALAD 197 Query: 184 LRKGGYIEMNKGKLVAINRLPSE 206 + G+IE +G+ I+ P+ Sbjct: 198 FVQRGWIE-QRGRTTIIHD-PAR 218 >UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2T5_DESAP Length = 217 Score = 86.5 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 66/201 (32%), Gaps = 14/201 (6%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGL 73 L + Q IF+S + + + GV+ + + + ++G+ Sbjct: 14 LLDGVGPTIDYPKGQRIFTSGEVPDRVYFLKAGVVKVYCLTGDGQRQTVALRYQGELIGI 73 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQ 132 A+ L + + + + + I L+ + L + R Sbjct: 74 AEALYGGERTCCAEVVTDASMVVISKGRFIELLRSRPGFALRVAEILGARLREAHTMISD 133 Query: 133 LIGHNSYEQIRATLLSMIDW------NEELRSRI-GVMNYIHQRTRISRSVVAEVLAALR 185 L ++ ++ LL +++ +R + + SRS V +L R Sbjct: 134 LTCYHVPGRVALFLLKLVERCGVTDREPGVRLSLRLTHEELAHMIGTSRSNVTSILNTFR 193 Query: 186 KGGYIEMNKGKLVAINRLPSE 206 K G IE+ ++ +N P Sbjct: 194 KHGAIELKGREIRILN--PER 212 >UniRef50_Q6MNF7 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNF7_BDEBA Length = 198 Score = 86.5 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 60/182 (32%), Gaps = 8/182 (4%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGLADGLMKND 81 + V++ + ++ + + G++ L ++ L+ + + I G Sbjct: 13 KNFRRGDVVYRAGETPQNIYFVESGLVGLGLWGESGKDHLVRLFREGQIFGHRSLFANEP 72 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIE-QNQLWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 + + + ++ L LA + R E + + L ++ Sbjct: 73 YHATATVIDDSVLRVMNKNEMRQQMKGNCDLAEKLLETLAIELRRAEAKQLILSEKDAPA 132 Query: 141 QIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAI 200 +I ++ + + + E I + V LA + G IE +++ + Sbjct: 133 RIAEAVVYLKELHPEY---SWTRQEIADFCGTTTPTVIRTLARFVEDGLIEQRGREIIIL 189 Query: 201 NR 202 ++ Sbjct: 190 DK 191 >UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY7_CHLT3 Length = 229 Score = 86.5 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 62/185 (33%), Gaps = 11/185 (5%) Query: 28 NNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIP 83 + V+ ++IL+G + + R ++ I G L Sbjct: 36 YKKDDVVLFESELGNALYIILDGFVKISRTNEDYKEVILAILAERDFFGEMSVLDGAVRS 95 Query: 84 YKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQI 142 I+ + A+ + L+E+N + + + R + + + ++ ++ Sbjct: 96 ADAIAISKVHALKIAAEDFLDLLEKNPKISLALLREMVSRLRKTDHQIKSISLSDAIGKV 155 Query: 143 RATLLSMIDWNEELRS------RIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 + +L + + R + SR ++ VL+ + G IE + K Sbjct: 156 ASVILRLANDVGRQRRGRVEIDNFASQQEMANYAATSRETISRVLSMFERDGLIERDMNK 215 Query: 197 LVAIN 201 ++ + Sbjct: 216 IIITD 220 >UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PC82_BACCO Length = 226 Score = 86.1 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 60/180 (33%), Gaps = 12/180 (6%) Query: 23 TRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLM 78 + + + IF E + I G + + R + ++ + + + Sbjct: 25 SVKKHAEKDAHIFFQGDPQEAVYFIESGEVKIYRTDANGKEQVVTLLRDGDMFPHVGFFR 84 Query: 79 KNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHN 137 K P ++ + + ++ N L + ++ + L+ R I +N Sbjct: 85 KISYPANAMAVVDTNLVAIRITDFENVLLNNPQLTMTLYGVMSDEILDLQDRLEAQILNN 144 Query: 138 SYEQIRATLLSMIDWNEELRSRIGVM-------NYIHQRTRISRSVVAEVLAALRKGGYI 190 +YEQ+ L + + V+ + + ++R V+ + L++ I Sbjct: 145 AYEQVVKLFLRLTRTHGVQEKDGFVLVKTPLNNSDLANMIGVTRETVSRTIRQLKEKNLI 204 >UniRef50_D0DBE2 Putative transcriptional regulator Crp/Fnr family protein n=1 Tax=Citreicella sp. SE45 RepID=D0DBE2_9RHOB Length = 235 Score = 86.1 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 63/192 (32%), Gaps = 9/192 (4%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIM 71 T N+E ++ + ++I G + + + ++ + I+ Sbjct: 25 AAFLDACTLRFCNSETPLL-TQHEPTTGCYLIARGRVVITYLDGDGNESMVHVAGPGEIV 83 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDV 131 G + L + + + T + P + +Q + R+ L + Sbjct: 84 GEVEALSGSLCVASCTTMPDTTVLNCPVSVLMEYAQQPSVLRNLARILHERLIRDLENRS 143 Query: 132 QLIGHNSYEQIRATLLSMI-DWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYI 190 ++ L + E+R + SR V +L LR G I Sbjct: 144 VEQFQTVEARLNNYLCVFSTADDPEIR---VSQTQLATLLACSRQKVNRMLKDLRDAGVI 200 Query: 191 EMNKGKLVAINR 202 ++++G++ ++R Sbjct: 201 DLSRGRIRVLDR 212 >UniRef50_C0N1U9 Cyclic nucleotide-binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1U9_9GAMM Length = 227 Score = 86.1 bits (212), Expect = 7e-16, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 16/181 (8%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMK-N 80 +F K ++ + + I EG +++ E +++ +G + Sbjct: 23 KFYPAKNIVIRPGDPADTLYYIREGSVTVCMENEEGEELIVAYLNQGDFIGEIGFFSEVG 82 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQN------QLWRDAFYWLAWQNRILELRDVQLI 134 D + ++ + + +Q TL + L +A + + L Sbjct: 83 DRMVTIRAKTDVRTEEVSYQQLRTLADTQLKNCYATLIYTIGEQMASRLLSTTRKATDLA 142 Query: 135 GHNSYEQIRATLLSMIDWNEELRSRIGVM-----NYIHQRTRISRSVVAEVLAALRKGGY 189 + ++ A L + + +R G+ I + SR +V VL L++ G Sbjct: 143 FLDVAGRVEAALQELALQPDAMRHPQGIQIKITRQEISRMVGCSREMVGRVLKELQEDGT 202 Query: 190 I 190 I Sbjct: 203 I 203 >UniRef50_C4XHU2 Crp family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XHU2_DESMR Length = 240 Score = 86.1 bits (212), Expect = 7e-16, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 69/208 (33%), Gaps = 15/208 (7%) Query: 8 LQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIG 63 + + R T + ++F + + +F + +G + + R + Sbjct: 18 FDGLEREFEAFRRLATVRRV-KKNAIVFFENDRCDRSFYLDQGSVKIFRVSLHGKEPTFF 76 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQ 122 I A + GLA+ + + C + + L+ + + R L + Sbjct: 77 IRSAGEMFGLAEVVGGERRKCSAQALSECLLLDIRRDDLLGLLVEQPFMARRIIEVLGRR 136 Query: 123 NRILELRDVQLIGHNSYEQIRAT--------LLSMIDWNEELRSRIGVMNYIHQRTRISR 174 R L + ++ + ++ + ++ R+ I T + Sbjct: 137 IRYLSDQLENVMTCDVPTRLLKLLLCLSHDEIAQARGGPADVPVRL-TQGQIAAMTGSCQ 195 Query: 175 SVVAEVLAALRKGGYIEMNKGKLVAINR 202 ++E LAA G I +++ ++ ++ Sbjct: 196 QTISETLAAFESRGLIAVSRQRIRLLDP 223 >UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax=Finegoldia magna RepID=B0S3H2_FINM2 Length = 501 Score = 86.1 bits (212), Expect = 7e-16, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 70/192 (36%), Gaps = 15/192 (7%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMK 79 +F + +F + E+ +VI +G I + ++ + +G + L Sbjct: 303 KFLKLKAEDYLFKPGDSAENMYVIHKGTIKVFHNTIDGREQILYLYHENDFVGGHNILED 362 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAW---QNRILELRDVQLIGH 136 Y + +C +P + + L L + R+ E +L Sbjct: 363 VKYIYMGQALTDCEVIMIPRDIFNKYLINSPL--ALTKILKKSFERIRLAEDLVQRLSTS 420 Query: 137 NSYEQIRATLLSM-----IDWNEELRSRIGV-MNYIHQRTRISRSVVAEVLAALRKGGYI 190 N+ + A LL + ++ + +R + + + + ++R + L +K GYI Sbjct: 421 NATMKTAALLLRLKDTMGVETKDGIRLDLAMNREELGNYSGLTRETITRKLGEFKKLGYI 480 Query: 191 EMNKGKLVAINR 202 ++ K++ I Sbjct: 481 DLIGTKVIVIKN 492 >UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9N7_CLOTS Length = 225 Score = 86.1 bits (212), Expect = 8e-16, Method: Composition-based stats. Identities = 21/186 (11%), Positives = 67/186 (36%), Gaps = 11/186 (5%) Query: 27 FNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDI 82 F + +I + ++ ++I +G I + + + ++ I + G + Sbjct: 32 FYAKGNIIINEGDRIDNIYIIHKGKIKVYKINLDGKEQILYILKDGDTFGENSIFKEQKA 91 Query: 83 PYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQ 141 + + + L + + +I +N + +L + + +E + + + Sbjct: 92 TFYAEAMDDVKLCLLSKEDFMGIISRNPEIALKIMNYLLERLQNIESLVKDITTEDVKTR 151 Query: 142 IRATLLSMIDWN-----EELRSRIGVMNY-IHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 + + +L + D + ++ ++ + I +R ++ L L G I+ Sbjct: 152 LLSMILKLADKEGIKSSDGIKLKLYLSREDIANLLGTTRETISRKLHELEDDGIIKFLSN 211 Query: 196 KLVAIN 201 K + + Sbjct: 212 KEILLK 217 >UniRef50_A9B1R0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1R0_HERA2 Length = 222 Score = 85.7 bits (211), Expect = 8e-16, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 56/195 (28%), Gaps = 7/195 (3%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPY 69 + LS + Q+I +++ G I + R ++ + +A Sbjct: 20 IIAALSSHANEQTVERG-QIITLEGDPAVAMYLVYSGRIKVVRHSIEGREHILHVVEAYD 78 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILEL 128 + P + +P + + +Q+ L A + L Sbjct: 79 HFNTVPMFREARCPATSEALVTSQLLAIPREHIRQVAQQHPELALAMLGEFANRLHNLVG 138 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRS-RIGVMNYIHQRTRISRSVVAEVLAALRKG 187 L H ++ LL E+ + + R +V L A Sbjct: 139 LIENLALHTVNGRLARLLLQQAALAEQNPNLAPLTQAEMAAHIGSVREMVGRALKAFDAQ 198 Query: 188 GYIEMNKGKLVAINR 202 G I + +G + I+ Sbjct: 199 GLIRLERGIIEIIDP 213 >UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bacteria RepID=Q5P8X7_AZOSE Length = 259 Score = 85.7 bits (211), Expect = 8e-16, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 13/193 (6%) Query: 20 RYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLAD 75 +G R + + V+F ++L G + L +I I G A Sbjct: 55 AHGVREQNVDRGCVVFHKGDPCHGFHLVLAGQVKLAFTSAEGHEKVIEIILPGQTFGEAV 114 Query: 76 GLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNRILELRDVQLI 134 M + +C H+ ++++ ++ R L+ + L Sbjct: 115 MFMDKPYVVMAQALTDCKLLHISKSVVFDEMDRDPVFCRKIIAGLSHRLHHLIADVETYS 174 Query: 135 GHNSYEQIRATLLSMIDWNEELRSR-------IGVMNYIHQRTRISRSVVAEVLAALRKG 187 + E+I LL + + E R+ I R +++ + +L L + Sbjct: 175 LRSGRERIVGYLLRQEEIDGEPRTNGYVSVRLPTSKGTIASRLNLTQEHFSRILHELIEA 234 Query: 188 GYIEMNKGKLVAI 200 G I + G+ + I Sbjct: 235 GLICVE-GRTIHI 246 >UniRef50_B2UK41 Transcriptional regulator, Crp/Fnr family n=2 Tax=Ralstonia pickettii RepID=B2UK41_RALPJ Length = 230 Score = 85.7 bits (211), Expect = 8e-16, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 64/204 (31%), Gaps = 18/204 (8%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDV----NNEDTFVILEGVISLR----REE 58 PLQ L +C +F + F + GV+ L + Sbjct: 15 PLQAAQALLEC----AVPVPVAAG-AFLFHQGDSMDGGSHAFFGVASGVLKLSIFNAEGD 69 Query: 59 NVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYW 118 ++ + + G L + + I+ + + +Q L+ Sbjct: 70 EAILALVEPGNWFGGVSTLDQQPRGHCAIALEDAEVLGVSVEQFEALMRDAAFAGAIARL 129 Query: 119 LAWQNRILELRDVQLIGHNSYEQIRATLLSMID----WNEELRSRIGVMNY-IHQRTRIS 173 +A + R+ H + ++ + + + E R+ I + IS Sbjct: 130 VATRLRLAYGSLASAALHATRARVARRIAMLAHGDVSQSSEGRTTISTSQDALAMMLGIS 189 Query: 174 RSVVAEVLAALRKGGYIEMNKGKL 197 R +++ L AL + G I + G + Sbjct: 190 RQTLSKELQALVRLGAIRLRYGHI 213 >UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridium thermocellum RepID=A3DJ45_CLOTH Length = 232 Score = 85.7 bits (211), Expect = 9e-16, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 11/190 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKN 80 + + ++I + + +I G + R + ++ I G + L+ Sbjct: 40 RKRYSRGEMIVLEGSHLDRLIIINSGKVKAFRNTFEGKEQILYIFSQGDFFGEKNLLINQ 99 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSY 139 Y + + + L+ + + L + LE + N+ Sbjct: 100 TAQYNVEALEETHVCTIKKNDFKNLLREYPEIGLKIIEELCNRLERLENAVENMGTKNAE 159 Query: 140 EQIRATLLSMIDWNEELRSRIGVMNY------IHQRTRISRSVVAEVLAALRKGGYIEMN 193 E++ A LL + ++ I ++R V+ + L++ G IEM Sbjct: 160 ERVSAVLLEFARKYGKESQNGIIVELPLSREGIANYIGVARETVSRKMNMLQEEGIIEMV 219 Query: 194 KGKLVAINRL 203 K V I + Sbjct: 220 GNKKVIIRNI 229 >UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteriaceae RepID=C6A9A9_BIFLB Length = 253 Score = 85.7 bits (211), Expect = 9e-16, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 15/185 (8%) Query: 30 EKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMK--NDIP 83 + + IF+ ++ +VI EG + L R+ L+ I ++G Sbjct: 58 KGEYIFTEGDTDQRMYVIQEGRVKLTRQSVDKRVQLLSIHTRGELLGEIPVFDPQGGPRT 117 Query: 84 YKLISEGN-CTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQ 141 ++ + L + + + D LA + R R L+ + + Sbjct: 118 ANAVAMVDGTQVVWLDHDALFAWLSKYPGVAVDMLQVLANRMRANNERIADLVFSDVPGR 177 Query: 142 IRATLLSMID---WNEELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKG 195 + TLLS+ E ++ + Q SR V + L G+I G Sbjct: 178 LAKTLLSLASRFGKPVEEGLQVPHDLTQEEMAQLVGSSRETVNKALMDFANRGWIA-RNG 236 Query: 196 KLVAI 200 + + I Sbjct: 237 RTIII 241 >UniRef50_C1F0X5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0X5_ACIC5 Length = 228 Score = 85.3 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 59/185 (31%), Gaps = 11/185 (5%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPY 84 +F +N +++ G I L + +++ I + I+GL+ L Sbjct: 35 PAGTFLFFERESNRGVYIVCSGQIKLSVSSSSGKTLILKIARPGDILGLSSSLTGAAYEA 94 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIG-HNSYEQI 142 +L + T++ Q ++ L Q + + +++ E++ Sbjct: 95 TAEVLQTARVTYLRTDELRTIMLQYPDVYASIIRQLNLQYETACEQLRTIALCNSTTEKV 154 Query: 143 RATLLSMIDWNEELRSRI-----GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 LL + I + +R + L+ R I ++ + Sbjct: 155 ARLLLQWSRQGRQTPEGTQFTVPLTHEQIAECVGATRETITRTLSDFRNKHLIALHGANM 214 Query: 198 VAINR 202 V +R Sbjct: 215 VIPDR 219 >UniRef50_A8V0L7 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0L7_9AQUI Length = 217 Score = 85.3 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 66/195 (33%), Gaps = 8/195 (4%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQA 67 + + +++ F +I+ D ++IL+G +++ + ++I Sbjct: 16 DNILEEITKNADILNFEKGHTIIWK-GDQTTDLYIILKGKVNVITFDEKGNELIITTLSK 74 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRIL 126 +G + + + + + + IE+ L L + R Sbjct: 75 GDFVGELSLIDGKPRSMSVETLTDTQVAVIRRNFFLKAIEKYPQLCLQLAKNLVERIRKT 134 Query: 127 ELRDVQLIGHNSYEQIRATLLS--MIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAAL 184 + L + +I + + + N+ + + + +R SR V++ + +L Sbjct: 135 DEILESLAFLDVKRRIVKYIKDNGIFENNKIYKINKISHSELAKRIGSSREAVSKAIKSL 194 Query: 185 RKGGYIEMNKGKLVA 199 + G IE + Sbjct: 195 SEKGIIEEKDNCFIL 209 >UniRef50_A6G199 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G199_9DELT Length = 228 Score = 85.3 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 70/212 (33%), Gaps = 13/212 (6%) Query: 1 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR---- 56 ML+ ++P + + + VI + +V+L G ++L R Sbjct: 6 MLACIEPFTAARNEEIEVLARSVVRSRKPSQTVIIRESQQPDGLYVVLRGRVNLVRAADG 65 Query: 57 EENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQ-NQLWRDA 115 ++++ + G + + ++ +PA + + + Sbjct: 66 GRDLILTSLGPGDVFGESCAVEGVGASTTAVTAVATDIARIPADVLSAHLRRDSNTLVRL 125 Query: 116 FYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRS--------RIGVMNYIH 167 ++ + +E L + E++R TL+ + + + + Sbjct: 126 MKLMSEKLSEVESVASGLALCDVEERLRRTLVRLAKRQGRHSPADEGWILAPVPTQSELA 185 Query: 168 QRTRISRSVVAEVLAALRKGGYIEMNKGKLVA 199 + R V+ L+A+ + G + + +++ Sbjct: 186 RMVGSCRETVSRTLSAMARNGLLSSSGRRMIL 217 >UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ06_DESAA Length = 237 Score = 85.3 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 61/182 (33%), Gaps = 9/182 (4%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDIPY 84 + Q IF + + L+G + + + + + + G + P Sbjct: 41 KKGQFIFYDGDQADGFYAALDGQVKIYKISPEGKEQIFHVFGPGEPFGEVPVFSGDSYPA 100 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + + K + LI Q+ + + LA + R ++ L ++ Sbjct: 101 NAQALVKTKCLYFSRKGIVELINQSPAIAMNMLAVLARRLREFTVQVENLSLKEVDGRVA 160 Query: 144 ATLLSMIDW---NEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAI 200 +L M + + I + + ++ L L+ G I+++K ++ I Sbjct: 161 GYILHMATEQNSPDLVVLHISKAH-LASLLGTIPETLSRSLGRLKDRGLIQVDKREIQII 219 Query: 201 NR 202 +R Sbjct: 220 DR 221 >UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Tax=Chloroflexi (class) RepID=A7NFZ8_ROSCS Length = 218 Score = 85.3 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 11/194 (5%) Query: 16 KCLSRYGTRFEFNNEK--QVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPY 69 + L+ E + + I + + G + L R ++ + A Sbjct: 19 RALADAARLMESRTYRPGEYIAYEGERPAGVYFVQRGRVRLSRTAPDGREQVLAMVGAGE 78 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILEL 128 + + LP ITLI ++ L +A Q R L + Sbjct: 79 NFNAVAIFDSHGNLTTARAMSLVQCLILPGDALITLIRRHPDLALAMLREMAGQLRNLAV 138 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGG 188 L + E++ LL + + +RT R + L L + G Sbjct: 139 LVEDLAFRSVRERLARELLREARE----GAAELTHQELAERTATVREIAGRALRQLAQEG 194 Query: 189 YIEMNKGKLVAINR 202 + + +G++V ++ Sbjct: 195 LVRLERGRVVVLDP 208 >UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN7_FIBSS Length = 236 Score = 85.3 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 59/194 (30%), Gaps = 17/194 (8%) Query: 25 FEFNNEKQVIFSSDVNN-EDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMK 79 + N + + ++ + ++I G + + ++ + G + Sbjct: 32 VKNYNRDETVVLEGDDSVQALYLIAMGSVQVYMTGIDGRETILSFLERGDFFGEMSLIDG 91 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNS 138 + + + + + ++LI + + L + R + L + Sbjct: 92 EPRSASVRTVTDAKLLVIHRESFLSLIRKTPEIAMALMSELCKRLRKANKQIGSLSTMSV 151 Query: 139 YEQIRATLLSMIDWNE-----------ELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 ++ TLL+++ + + + +R V+ + + L K Sbjct: 152 SGRVAGTLLNLMQERGVRIHTDNGNMVTVIHNRPTQQQLADMSGTTRETVSRICSLLVKT 211 Query: 188 GYIEMNKGKLVAIN 201 I M +V + Sbjct: 212 NAIAMTGKDIVIFD 225 >UniRef50_C6XVJ1 Cyclic nucleotide-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XVJ1_PEDHD Length = 195 Score = 84.9 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 62/191 (32%), Gaps = 5/191 (2%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPY 69 + K L + VI+ + + I G + + + + GI +A Sbjct: 2 IIKYLLNNHYPVHTYKKDAVIYVPGALPKAVYFIKSGEVRMVTVNDDGKEFIQGIFKANQ 61 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILEL 128 G L+ I + + +IE+++ + + L+ + + Sbjct: 62 YFGEPALLVNKPYLAYTIVTRDAEIIVVNKTDFFKMIEEDRGFSMELIRTLSNRLFYKSM 121 Query: 129 RDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGG 188 +L + +IR + ++ E + + + V ++ L Sbjct: 122 MLEELANEQAEHRIRTLISYLLRNLAEAEVLDITRQQLADMSGLRVETVIRLVKKLAAQK 181 Query: 189 YIEMNKGKLVA 199 +++ KGK+V Sbjct: 182 ELKLIKGKIVK 192 >UniRef50_C1XMJ3 cAMP-binding protein n=2 Tax=Meiothermus RepID=C1XMJ3_MEIRU Length = 214 Score = 84.9 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 5/179 (2%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDIPY 84 I + + +LEG + L + EE + + + A I G L Sbjct: 27 RRSSYICYPEDEARTLYYVLEGWVRLFQLGPQEEEITLTVVGAGDIFGEGALLPDGQYGM 86 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQLWRDAF-YWLAWQNRILELRDVQLIGHNSYEQIR 143 +C + + L + + AF L+ + R E R L ++ Sbjct: 87 FAEPLVDCELLSASREDLLRLNSRFPEAQAAFVLLLSRRLRQTEERLRDLRFKEVLPRLA 146 Query: 144 ATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 LLS + +E + +R + +VL L IE+ +++ + Sbjct: 147 KALLSAMRRGKEGLEVTLSHQDLAHLAGSTRETITKVLGELAMDDTIELGYRRILILKP 205 >UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=Rhodocyclaceae RepID=Q5P0W6_AZOSE Length = 229 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 10/192 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYI 70 ++RY +V+F F ++ G + L + ++ I Sbjct: 26 IDRVARYTRERTLEKG-EVLFQRGDPVHGFFFVVSGQMKLAVSSAQGNEKVVEIISPMNS 84 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNRILELR 129 G A + P H+ LI+Q+ + R +A + + Sbjct: 85 FGEAVMFLNRPYPVFAEGLVATRLLHIGQAVVSDLIDQDSSFARKLLAGMAIRLHSMIQD 144 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSR----IGVMNYIHQRTRISRSVVAEVLAALR 185 +S +++ LL ++ + +R I R ++ ++ + L Sbjct: 145 VEIYSLRSSTQRVIGYLLQQVEQDGATGARDIQLPTSKQVIASRLNLTPETLSRIFHDLV 204 Query: 186 KGGYIEMNKGKL 197 G I ++ + Sbjct: 205 NAGLITVHGKHI 216 >UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QZ1_SULDN Length = 209 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 70/195 (35%), Gaps = 15/195 (7%) Query: 8 LQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIG 63 K++ + + ++ ++F + +++++GVI L + + +++ Sbjct: 16 EDTIKKIESFTTDH-----KVSKDNIVFYEGDEPKYLYLLVKGVIKLYKTSSSHKEIVLK 70 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQ 122 ++G P + + + ++ +I N L + L + Sbjct: 71 YFHENELIGEVANFENIPYPATAKAYSDVEFLKVDFEKLKEVIFLNPSLAFNIQTSLIKK 130 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 + LE + +S E++ + S D E ++ I + +S ++ +L Sbjct: 131 IKNLENIISTNLVLDSKERVAKYIYSHSDDFFETKN-----IEIAEILGVSPETLSRILK 185 Query: 183 ALRKGGYIEMNKGKL 197 + G I + K + Sbjct: 186 FFKDNGIINIKKKYI 200 >UniRef50_C1SKM4 cAMP-binding protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKM4_9BACT Length = 218 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 13/196 (6%) Query: 17 CLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMG 72 L R+ ++KQ++F + F +++G I L R + ++ ++ I Sbjct: 24 KLLENVCRYRRVDKKQILFMENEEGSTVFFLVQGSIKLYRTNDEGREAVVHFVRSGEIFA 83 Query: 73 LADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILELRDV 131 + P ++ C + AK+ +I + + L+ + + Sbjct: 84 EILLQLGLKYPVTSMTLEECDLVEIDAKKLEEIIAGDPMVSMRLIAALSRRIKYFVNLIE 143 Query: 132 QLIGHNSYEQIRATLLSMIDWNEELRSRIGVMN----YIHQRTRISRSVVAEVLAALRKG 187 L ++ +RA L++ + ++ S++ + + + + VL L + Sbjct: 144 SLTIND----VRARLVNWLAAQKKKESKVIKLPVPKGELALLLGTTPETFSRVLKKLAEE 199 Query: 188 GYIEMNKGKLVAINRL 203 G+IE+ ++ + L Sbjct: 200 GFIEVQGREIKVLKDL 215 >UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6Z4_SULNB Length = 233 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 60/181 (33%), Gaps = 9/181 (4%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKN 80 + + ++F ++ ++L+G I L + + I AP ++G Sbjct: 27 IKQYAKDSIVFYEGDESKYLHILLDGNIKLYKTTPKGTQIQINRLAAPAMIGEYACFENQ 86 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 P + LP ++ + L + +L + +S Sbjct: 87 PFPATCEFLTDGVMGLLPFDFVYKHLDNPGFSLEIIKSLTGKVALLSALVHKETVLSSEA 146 Query: 141 QIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAI 200 ++ + + + L++ I ++ + +L +K G I + K++ + Sbjct: 147 KVADLMTQKLPLFQRLKNN-----EIASMLNLTPETFSRILTKFKKEGIITVKNQKIIIL 201 Query: 201 N 201 N Sbjct: 202 N 202 >UniRef50_A6EU35 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EU35_9BACT Length = 198 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 69/177 (38%), Gaps = 10/177 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLI-GITQAPYIMGLADGLMKNDIP 83 E ++ Q+I ++ + + F I +G + + N ++ + + I G K+ Sbjct: 13 MENIDKGQIIELNNEHKDSIFFIKKGSVKIVNTSNDIVKYVVKRGNIFGELALYDKHAAT 72 Query: 84 YK-LISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQ 141 + + + ++ +Q L+E++ L + + LE R L+ +S + Sbjct: 73 EEVAYTLEDSVICYIKTEQMENLMEKHKSLKNGLLKIYGIRIKKLERRLNDLLYKDSATR 132 Query: 142 IRATLLSMIDWNEEL-------RSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 I+ + + E+ + I T SR V+ VL+ +RK I+ Sbjct: 133 IKEFIADYLQEFGEVDTNGTLKAKNLLSHKDIANLTNTSRQTVSNVLSKMRKEKLIK 189 >UniRef50_B1HNA1 Anaerobic regulatory protein n=2 Tax=Bacillaceae RepID=B1HNA1_LYSSC Length = 231 Score = 84.5 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 75/206 (36%), Gaps = 15/206 (7%) Query: 11 FGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQ 66 K+ ++G + N + IF +++ + I GV+S+ + + + I I Sbjct: 8 LEKIMDLFQKHGVFIKVNKGNK-IFLEGERSKEIYYIKSGVVSISQETETGKELTIRICG 66 Query: 67 APYIMGLADGLMKNDI-PYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNR 124 I+G + T Y L + L+E+ + + WL +N Sbjct: 67 PDSIIGEGSLFCNLVYNSMTAKVLESATLYVLSRQSLEHLLEEQPTIMVEYMKWLQTENL 126 Query: 125 ILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIG-------VMNYIHQRTRISRSVV 177 + R L+ + + +TL+ + + +L I SR ++ Sbjct: 127 KHQSRLRDLVLNGKKGALFSTLIRLSNTYGKLLEDGSIFIEFQLTNTEIANLCATSREMI 186 Query: 178 AEVLAALRKGGYIEMNKGKLVAINRL 203 +L L+K + +KG + I+ L Sbjct: 187 NRMLNDLKKHDILTFDKG-FITIHDL 211 >UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=B8HYC6_CYAP4 Length = 236 Score = 84.5 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 60/185 (32%), Gaps = 7/185 (3%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKN 80 + + ++IF F++ G + + + ++ L Sbjct: 38 VQCYDRGEIIFHQGDEGTGFFLVRSGRVKIFKLSAEGREQILHFLGEKDYFAEVPALDGQ 97 Query: 81 DIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSY 139 P + P + + L+EQ L + A R L+ H Sbjct: 98 CFPASAAALEQSELLFFPRQAFLQLLEQQPTLTINLLKSFARHLRHFSHLIDSLVLHEVP 157 Query: 140 EQIRATLLSMIDWNEELRSRIGVMN--YIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 ++ LLS+ + + + + + R ++ V A L + G IE++ ++ Sbjct: 158 ARLAIYLLSLSEKTGQAETVELDLPKGQLAARLGTVPETLSRVFAKLGRAGLIEIDGSRV 217 Query: 198 VAINR 202 ++R Sbjct: 218 KLLDR 222 >UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUT3_ACIBL Length = 234 Score = 84.5 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 12/187 (6%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKND 81 ++IFS FV+ G I + + ++ I + Sbjct: 36 RKYPNGEMIFSEGDACAGLFVVQSGHIRIFKSSASGREQVLSIDGPGSSVAELPVFDGGS 95 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNRILELRDVQLIGHNSYE 140 P ++ +CT L + L + + + R L +L Sbjct: 96 YPASAVAVTDCTLLFLSKQDFHALCMKYPEMALKVLRVVGGRLRRLVGIIEELSFTTVRH 155 Query: 141 QIRATLLSMIDWNEELRSRIGVM------NYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 ++ A LL + + + + + R +V+ ++ L++ G IE Sbjct: 156 RLVALLLRLAKTEGNKTEQGITITLPAHNQELAAQIGTVRELVSRNMSRLQQEGMIE-QD 214 Query: 195 GKLVAIN 201 G+ V + Sbjct: 215 GRTVILK 221 >UniRef50_C0YJ79 CRP/FNR family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ79_9FLAO Length = 228 Score = 84.5 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 61/194 (31%), Gaps = 17/194 (8%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGL 73 L + + + + +F+ + + EG I + +N +I I + +G Sbjct: 23 LLTGAMKTKNYRKNEPVFTDGTKPNGVYYLNEGKIKKYKVDNDGREQIIYIYTSGEFLGY 82 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQL 133 + L + N + + ++ Q+ L L Sbjct: 83 SAILSNESYGDTASTLENSVISFISKDSFLDILNQS---SVLSRLLLKSLSHEFSVMANL 139 Query: 134 IGHNSYEQIRAT-LLSMIDWNEELRSRIGVMNY---------IHQRTRISRSVVAEVLAA 183 I S+ +R LS++ +++ +S N + +R +A ++ Sbjct: 140 IAVLSHRTVRERAALSLLILHDKYKSNGTPDNEVFITLSRIDLANMVGTARETLARIIND 199 Query: 184 LRKGGYIEMNKGKL 197 ++ I K+ Sbjct: 200 FKQEKLIRSEGRKI 213 >UniRef50_B6WW25 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW25_9DELT Length = 233 Score = 84.2 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 17/209 (8%) Query: 8 LQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIG 63 + + R R E ++F F + G++ + + Sbjct: 13 FDGIEECKEHFLRSAQRIELKKND-IVFFEGDAGGACFYVASGLLRIFCVTEAGKESTFF 71 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQ 122 + A I GL++ L + + L + L+ +N L R + + Sbjct: 72 LRTAGEIFGLSEVLQDLPRKVSAQALAASVIFRLDRQAFDDLLSRNYALARRVITVMGSR 131 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDW--------NEELRSRIGVMN-YIHQRTRIS 173 R L + ++ LL++ + L + + + + Sbjct: 132 LRYLGDSLSAQTC-DVRHRVGRLLLALAHESLRDPAAWEQPLALPVSLSQGQMAAMVCST 190 Query: 174 RSVVAEVLAALRKGGYIEMNKGKLVAINR 202 + V+E L L+ G I++ +G+ + I R Sbjct: 191 QPTVSETLHQLQDEGLIDI-RGRGIVIRR 218 >UniRef50_Q09BB2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09BB2_STIAU Length = 226 Score = 84.2 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 60/199 (30%), Gaps = 12/199 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYI 70 + LS VIF D +++ G +++R + V++ + + + Sbjct: 21 LEHLSTLLHTRHCAKGD-VIFQQGDEGADLYIVRAGQVAIRLHSPEGKEVILTLLGSGEV 79 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G L ++ L + ++ + R L+ R + Sbjct: 80 FGELSLLDGEPRSTHAVAREETVLLSLRREDFHRFLDTRPQVARSLLATLSRLVRRVTQH 139 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELR------SRIGVMNYIHQRTRISRSVVAEVLAA 183 ++ ++ LL + E R + + + ++R + L Sbjct: 140 VHDATFLDARTRLVRVLLDLSRNQGEPRGQGVAIRQRLTQSELANLCGLTRESTNKWLRF 199 Query: 184 LRKGGYIEMNKGKLVAINR 202 + G + G++ + Sbjct: 200 YVREGMLSYEAGQITLLKP 218 >UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deinococcus RepID=Q1J275_DEIGD Length = 254 Score = 84.2 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 64/183 (34%), Gaps = 13/183 (7%) Query: 20 RYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLAD 75 T + +VI+ D + + + G++ + + + ++G+ G Sbjct: 52 AAATPYRSYRPGEVIYRMDDPADALYFVRSGLVKISKLFPNGKEAILGVIGQHDTFGELL 111 Query: 76 GLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLI 134 + P + + T LP + L++ L +A + + + Sbjct: 112 LQPEERRPTQAEALERTTLIVLPRAELQKLLDTKPALAMKLIRLMAARLFEAQSWTATVS 171 Query: 135 GHNSYEQIRATLLSMIDWNE-------ELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 +++ E++ + L + EL ++ I + +R V+ L+ L++ Sbjct: 172 AYSAPERVASLLYRLAREFGRPHAQGVELALKLN-QEDIARMVGATRETVSHSLSKLKQE 230 Query: 188 GYI 190 G I Sbjct: 231 GAI 233 >UniRef50_C6D207 Transcriptional regulator, Crp/Fnr family n=2 Tax=Paenibacillus RepID=C6D207_PAESJ Length = 236 Score = 84.2 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 68/190 (35%), Gaps = 14/190 (7%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKND 81 + +F + + I++G + + + + + + Q ++G D + Sbjct: 30 RAYEKGSCLFWEGDAADKLYFIMKGRVRAVKSTDSGRTLTLYLYQKGDLIGQMDPFPDSV 89 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYE 140 ++ + + K L+ Q+ L + W+ +R+ + + L+ Sbjct: 90 HSFRAEVTEDAKIGVIQRKDLEVLLWQHGDLAVEFMRWMGLMHRLTQTKFRDLMMFGKTG 149 Query: 141 QIRATLLSMID-------WNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMN 193 + + L+ + + + + +I + + +R V +L+ L+K I Sbjct: 150 ALCSLLIRLSNSYGKPTAEHIFITLKIS-NSEMADMIGATRESVNRMLSDLKKDDVIAYE 208 Query: 194 KGKLVAINRL 203 G L+ I L Sbjct: 209 DGHLI-IKNL 217 >UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Flavobacteriaceae RepID=C6WZT9_FLAB3 Length = 237 Score = 84.2 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 9/183 (4%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMKNDIPY 84 + + IF + + +G L + + ++ ++G L Sbjct: 44 RKGETIFEDGGTPNGVYFLNKGTAKLSKQGVYGKEHILRFIAEGDLIGYRSLLCGEQFQA 103 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + + + LP+ + L+E L +A++ L E++ Sbjct: 104 RAEAMTDVEAIFLPSDVFLHLLEVGPRLSFVMLQKIAFELGESSNTVTVLAQKTVRERLA 163 Query: 144 ATLL----SMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVA 199 LL + E I + +++ ++ G IE + L Sbjct: 164 EILLLLEQKLGTDPEGFIKITLTREEIANLVGTATESAIRLISEFKQDGLIEADGRSLKI 223 Query: 200 INR 202 +NR Sbjct: 224 LNR 226 >UniRef50_A9BSL8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BSL8_DELAS Length = 245 Score = 83.8 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 24/210 (11%) Query: 7 PLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLI 62 P + +L LSR G Q + ++D + V+ G + + + ++ Sbjct: 29 PPEVLDEL-TALSRLGR----YERHQQVRAADPKRREVLVVASGCVEVGGVDATGSRFVL 83 Query: 63 GITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAW 121 + A I+GLA L Y + +P + + L++ + LW+D + Sbjct: 84 SMHSAGDIVGLARLLEHTQFVYDYHAHQPTVLVEIPGESFLALLDAHPPLWKDICLLVLA 143 Query: 122 QNRILELRDVQLIGHNSYEQIRATLLS-MIDWNEELRSRIG---------VMNYIHQRTR 171 + L + +++ I + + + + Sbjct: 144 RMHELI----VVQQRHAFSNIDNRVAELLARLAPTHGQPAPDGQGVVLRISQSDLAAMLS 199 Query: 172 ISRSVVAEVLAALRKGGYIEMNKGKLVAIN 201 +SR + + L L + G ++ G+L ++ Sbjct: 200 VSRQTINKELRLLEQRGLLQAAYGRLTIVD 229 >UniRef50_Q7M956 PUTATIVE TRANSCRIPTIONAL REGULATOR n=1 Tax=Wolinella succinogenes RepID=Q7M956_WOLSU Length = 217 Score = 83.4 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 62/180 (34%), Gaps = 10/180 (5%) Query: 28 NNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIMGLADGLMKNDIP 83 E ++F +V+L+G++ + + + V+I Q P ++ L + P Sbjct: 33 YQEGNILFFEGEKPNHLYVLLKGILKIYKTDPRGNEVVIHYIQPPSLVAELVNLEGMNYP 92 Query: 84 YKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQI 142 I E + + +N + L + + LE + ++ ++ Sbjct: 93 ASAIFESDGEILAIDYAIFERDFLKNGDMAFYIIKSLTRKIKALEEVITSNLTMDTTSRV 152 Query: 143 RATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 + L I + ++ ++ L++ I + KG ++ +N+ Sbjct: 153 AKFFYDKSEELPCL-----SQRKIASILNTTPETLSRIVKKLKEEKIITVEKGSIIEVNK 207 >UniRef50_C6QGY2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QGY2_9RHIZ Length = 232 Score = 83.4 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 11/174 (6%) Query: 21 YGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADG 76 G + ++F D ++ FVILEG + L R ++G+ + G A Sbjct: 28 IGQGVRTYEKGALLFQQDSPSDAFFVILEGWVKLFRITPNGTEAIVGVLRRGESFGEAAI 87 Query: 77 LMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIG 135 M P + I L L+ + L Q+ Sbjct: 88 FMDRQYPVAAEVVTTSRLLKVDGDSFRRRIRVEPDLALAILASLSQHLKFLVGHIEQIKV 147 Query: 136 HNSYEQIRATLLSMIDWNEELRSRIGVMNY----IHQRTRISRSVVAEVLAALR 185 ++ +++ L+ + + S + V+ Y I +R ++ ++ LA LR Sbjct: 148 LDASQRVADFLVELSGQTQ--GSAVIVLPYEKALIAKRLGMTPESLSRALAKLR 199 >UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFT6_DESAH Length = 234 Score = 83.4 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 12/198 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYI 70 K LS R + + + F ++ F+I G I L + +++ I + Sbjct: 34 IKALSHEAMRKKLTKGQSL-FLQGDPADEMFLIKGGHIKLSKVLADGTELMLDIRKPGDF 92 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 +G ++ P + Q L+ Q + L+ + L R Sbjct: 93 VGENMFSEESLYPVSAFCLEDTLTCGFSRNQFEELVLQYPKVGLRIIKTLSERISSLTDR 152 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQR------TRISRSVVAEVLAA 183 L N +++ L ++ + S+ V+ + T R + + A Sbjct: 153 VGSLAASNIEDRLYRVLCNVAKEHGAKSSQGIVIQFPLTHEDLGFLTGAHRVSITRAMKA 212 Query: 184 LRKGGYIEMNKGKLVAIN 201 L+K G I + +L+ Sbjct: 213 LKKSGKILLKGKRLILPT 230 >UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE86_DESAA Length = 226 Score = 83.4 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 13/196 (6%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGLADGLMK 79 R + +V+F ++I G + + R + +++ I G L Sbjct: 29 RIQKVKAGEVLFRKGSEGTTLYLIQSGAVKIVLPSRLGDEMIVTIFSEGDFFGEMALLDN 88 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNS 138 I+ L + + ++ L+ + R + N Sbjct: 89 MPRSADAIAVDPTVLLLLNRSDFLHFLRKSDGAIEAILSSLSIRLRRTDDLLEDTSFLNI 148 Query: 139 YEQIRATLLSMID---WNEELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEM 192 + LL + D + I + +R + + L LR+ G + + Sbjct: 149 PARFAKKLLELGDTFGRRDGETLNISLRLTQKDLADMVGATRESINKELRVLREKGIVSI 208 Query: 193 NKGKLVA--INRLPSE 206 + L I+RL Sbjct: 209 SGSSLTIKDISRLKRR 224 >UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Y5_9DELT Length = 220 Score = 83.4 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 60/197 (30%), Gaps = 10/197 (5%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYI 70 + L+ + ++++ S N + F++L G + + R ++ + Q Sbjct: 21 VQALAERARTRVYGPGERIV-SQSDNIQAFFIVLSGHVKIFRSNEDGKEQILYLVQEGQP 79 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 P + + +PA + + L LA + Sbjct: 80 FCFCTAFTDRPYPVNVTALEKSQVATIPAADMEDMARREPLLLLKIMQTLAGRLLEAMNM 139 Query: 130 DVQLIGHNSYEQIRATLLSM----IDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALR 185 L H + E+I L+ E + + + ++ V+ + Sbjct: 140 VESLALHGTQERIAHFLMHAETCSASGPGESFRLPVSHRELAKIVGTTPETLSRVIQKFK 199 Query: 186 KGGYIEMNKGKLVAINR 202 + IE N + ++R Sbjct: 200 RNKTIEANGKTIRILDR 216 >UniRef50_UPI0001B46169 Crp/FNR family transcriptional regulator n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B46169 Length = 219 Score = 83.0 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 57/185 (30%), Gaps = 11/185 (5%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKNDIPY 84 Q IF+ + ++I EG +++ + + I I G Sbjct: 7 RPGQTIFAQGDPGDRLYLIAEGTVTISLRDPAGRTGVRAILGPADIFGELAVFDPAPRAC 66 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + L + ++ L L + R E + V+++ + ++ Sbjct: 67 TATALTEVRALWLDRASLRASMARDPALAEQLLRALTRRVRAAERQLVEMVSSDVNARVA 126 Query: 144 ATLLSMIDWNEELR------SRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKL 197 LL++ + + + Q R V + L + G+I + + Sbjct: 127 RQLLALGRRFGTREGGALRVAHELSQDELAQLVGADRVSVNKALGSFTTRGWISLRGKTV 186 Query: 198 VAINR 202 V IN Sbjct: 187 VIINP 191 >UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFR0_THIDA Length = 254 Score = 83.0 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 66/192 (34%), Gaps = 7/192 (3%) Query: 17 CLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMG 72 R Q++F+ +++ +G + L R E + + ++ Sbjct: 26 ATLAQAARSRDARAGQLLFAEGDEARAFYLVAQGEVHLYRFSPQGEEKVFQMLGDGDLLA 85 Query: 73 LADGL-MKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELRD 130 A P + + T + +P + ++L + L LA + R Sbjct: 86 EAAMFLSPAVYPMTARAVRDSTLFAVPRQALLSLCAASPPLMLTLLSALARRLYQAMNRI 145 Query: 131 VQLIGHNSYEQIRATLLSMIDWNEELRSRIGV-MNYIHQRTRISRSVVAEVLAALRKGGY 189 L +N+ +++ A LL + I V + + ++ ++ +L R+ G Sbjct: 146 DHLTLNNAGQRLVAYLLDLRRQQHGNWISIPVNFAVLAAQLGMTPETLSRLLQKFRQDGL 205 Query: 190 IEMNKGKLVAIN 201 + LV ++ Sbjct: 206 LSGKGRTLVLLD 217 >UniRef50_C8ZXR8 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZXR8_ENTGA Length = 230 Score = 83.0 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 65/187 (34%), Gaps = 10/187 (5%) Query: 25 FEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPYIMGLADGLMKN 80 + + Q++F+ + FV+ G+I + + + + + Sbjct: 36 YRTFPKGQILFNDGDLRDRIFVLCSGLIRIEKNDQTDSFFYTDFISEGELFPVNGLFEAA 95 Query: 81 DIPYKLISEGNCTGYHLPAKQTITL-IEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSY 139 + I+ ++ L + +L + R I +++ Sbjct: 96 CYDFSAIAVTEIEVAYVATAVLEQLMVADRELLKMIVKKQGRVLEQQVTRMQYCITSSAH 155 Query: 140 EQIRATLLSMIDWNEELRSR-----IGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 +++ TL ++ + +L ++N + + + +R V++VL L K I Sbjct: 156 DRVINTLAILMKKHGKLDESWYIPYPIMINDLAKFSGTTRETVSQVLKQLIKQKKISYQY 215 Query: 195 GKLVAIN 201 +L+ I+ Sbjct: 216 KELIFID 222 >UniRef50_A4J9H6 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J9H6_DESRM Length = 232 Score = 83.0 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 68/192 (35%), Gaps = 14/192 (7%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQAPYIMGLADGLMKND 81 + + I + + + +G + + E L +I+G Sbjct: 32 QKYKKGSYILEQGEVGRNIYYLNKGKVKIQQLTENGEEKLFWYASEGFIIGDVPYFHAFP 91 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLWRD-AFYWLAWQNRILELRDVQLIGHNSYE 140 LI+E +C Y ++ +N + + +A + R+L + + N Sbjct: 92 SNAALIAEEDCELYTFDKCTFNKILRENPGFAECLLEMMAIKIRLLISQIHDISFSNPAT 151 Query: 141 QIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLAALRKGGYIE-MN 193 +I L + + RS I T I R V V+++L+K G I+ Sbjct: 152 RISKLLYMLSHRYGQERSEGTEITLDITHKEIGSITCIHRVTVTNVISSLKKQGIIDKCT 211 Query: 194 KGKLVA--INRL 203 KG +V +N+L Sbjct: 212 KGHIVIKDMNKL 223 >UniRef50_D2EJW6 Arginine deiminase n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJW6_PEDAC Length = 236 Score = 83.0 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 63/182 (34%), Gaps = 12/182 (6%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIMGLADGLMKNDIPY 84 + QV+F + E+ + +++G++ R + +A + PY Sbjct: 43 PKGQVLFDQSDDRENLYFVIKGLVRAERTDANDKFTFYTYVKADLAFPYRGMFTECYYPY 102 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSYEQIR 143 + + + P +L+ QN ++ E + QL+ ++ ++I Sbjct: 103 TAQAMTDIEIVYFPMSVFESLLRQNNAALVKVVKEMSSIISESEDQIQQLVTPSARQRIV 162 Query: 144 ATL----LSMIDWNEELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 L + + S+I + + + SR +++ L + I+ + Sbjct: 163 QALKTFEADLGQLQPDGSSKIPYPLRIKELAVMSGTSRETAGQIVKYLVEQNLIDYEHKR 222 Query: 197 LV 198 V Sbjct: 223 FV 224 >UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MIF1_ALKOO Length = 229 Score = 83.0 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 65/200 (32%), Gaps = 9/200 (4%) Query: 8 LQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIG 63 + L+ FE + I+ + FV+ G I + R + +I Sbjct: 23 MNHDEMLEIAHIASSRTFEKG---ETIYGAGDEGGTLFVLYSGRIKISRFNVNGKEQVIR 79 Query: 64 ITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQ 122 I +G + + T L + L+ + + L+ + Sbjct: 80 IVGPGEFIGELSLFSSLPLTDHAQALETSTVCVLEGARLKELMTKYASIAFKILDELSRR 139 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLA 182 E + +++ LL + + E+ + + + + +++ ++ L Sbjct: 140 LEKAENLIENISLSTVTQRVAQVLLELSEEQNEILLNMTKGD-LASQIGMTQETLSRKLG 198 Query: 183 ALRKGGYIEMNKGKLVAINR 202 A ++ G IE+ K + I Sbjct: 199 AFQEEGLIELVGHKRIRIKN 218 >UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDW4_RHOVA Length = 251 Score = 83.0 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 12/198 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYI 70 L F + +F +E FVIL G I + + + A Sbjct: 47 IAALFAVSCVKAFAPG-EAVFRQGEAHEGIFVILCGKIRVYYLGPSGRELTLAYWSAGNF 105 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 +G + + +E +P LIEQ L +A + + Sbjct: 106 VGGPHIFGECQHMWSGQAEEAAEVLVVPGTGMRALIEQRPRLAVALVEAMAHKGKCFSSL 165 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEE------LRSRIGVMNYIHQRTRISRSVVAEVLAA 183 L ++ E++ LL M + + + +R + + + +R ++ L Sbjct: 166 IQMLGTRSAAERLAQLLLLMAEMGGQRIGDRIIINRTLTQDELARLVGATRQWISATLER 225 Query: 184 LRKGGYIEMNKGKLVAIN 201 R+ G IE+ ++V ++ Sbjct: 226 FREKGLIEVAPDRIVILD 243 >UniRef50_C6J2H1 Cyclic nucleotide-binding protein n=2 Tax=Bacillales RepID=C6J2H1_9BACL Length = 239 Score = 83.0 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 26 EFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKND 81 + E +F ++ F I G + L + + +++ + ++G AD + Sbjct: 33 KSYPEGTHLFWEGDYSDKLFYIKRGRVKLTKSTDEGKELILYMYGVGDMVGQADPFFSSK 92 Query: 82 IPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSYE 140 + +C + K +I Q+ + D W+ +R+ + + L+ + Sbjct: 93 HSFTAEVIEDCEIGIIEQKDLEIMICQHCDFAIDFMKWMGIHHRLTQTKFRDLMMYGKPG 152 Query: 141 QIRATLLSMIDWNEE------LRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK 194 + +TL+ + + E L ++ + +R V +L+ LRK ++ Sbjct: 153 ALCSTLIRLSNTYGEPHGDAILINKKITHTDLSNMIGATRESVNRMLSDLRKKDALDYEN 212 Query: 195 GKLVA 199 G +V Sbjct: 213 GMIVI 217 >UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXQ1_RUBXD Length = 234 Score = 83.0 bits (204), Expect = 7e-15, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 64/183 (34%), Gaps = 11/183 (6%) Query: 31 KQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYIMGLADGLMKNDIPYKL 86 K +IF+ ++ + +L GV+ L + + + + I G + Sbjct: 38 KDLIFAPGDPDDQLYFLLSGVVRLYKIYGDYKEATTALLKDRGIFGKLSLVEGRWQDVFA 97 Query: 87 ISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIGHNSYEQIRAT 145 + + +I+ + F L+ + R + L+ ++ Sbjct: 98 EAVTEARVAAIQKAAIEQVIKTKPDFALKLFSSLSERLRQSDEVIESLLHREVSTRLATL 157 Query: 146 LLSMIDW---NEELRSRIG---VMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVA 199 LL++ + E R I + +R V++V++ ++ G IE ++ Sbjct: 158 LLNLGERFGREEGGRLVIEVRMTHQDLANMIASTREAVSKVMSEFQREGLIETRNRRIAL 217 Query: 200 INR 202 +NR Sbjct: 218 LNR 220 >UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 Tax=Bacteria RepID=Q07J90_RHOP5 Length = 240 Score = 82.6 bits (203), Expect = 7e-15, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 64/196 (32%), Gaps = 12/196 (6%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRRE----ENVLIGITQAPYI 70 + F +F + F++L G + + E V++ Sbjct: 23 LDAVLHDARSARFAK-NSAVFQQGEDAHSFFLLLHGHVRASKTTPTGEQVVVRYVSPGET 81 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G+A + + P + + PA L+E+ L + + + + R Sbjct: 82 FGVATAIGLSRYPATATAVDDSVVLVWPAGAWPRLVERYPALSANTLRVVGSRLQETHTR 141 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEELRSR------IGVMNYIHQRTRISRSVVAEVLAA 183 +++ +++ LL + + + I Q T + V+ +L+ Sbjct: 142 VIEMSTQQVEQRVARALLRLAKQSGRKVEQGVEIAFPISRQDIAQMTGTTLHTVSRLLSG 201 Query: 184 LRKGGYIEMNKGKLVA 199 + G IE + ++V Sbjct: 202 WEQRGLIESGRQRIVL 217 >UniRef50_A1AQ27 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ27_PELPD Length = 250 Score = 82.6 bits (203), Expect = 7e-15, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 12/200 (6%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISL----RREENVLIGITQA 67 + L + + ++ +VI + +++L+G + + + ++ Sbjct: 26 DQQLSSLLEKSSVYAYDR-DEVIMMAGEEARQMYIVLKGQVRVVDLTADGQERVMAFRHR 84 Query: 68 PYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTIT-LIEQNQLWRDAFYWLAWQNRIL 126 G L +I+ C + +E+ L + R Sbjct: 85 GDCFGDVGLLDGKSDSATVIANEPCRVLLISKAVFDACFLEERDALLQVIAVLCGRLRES 144 Query: 127 ELRDVQLIGHNSYEQIRATL------LSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV 180 L + +++ +IRATL L + D + + + I R I+R V+ V Sbjct: 145 WLFHCIIGINDAESKIRATLSHYSKTLGVRDTDGVIINATLSHQSIADRVHITRETVSRV 204 Query: 181 LAALRKGGYIEMNKGKLVAI 200 L +R IEM + + Sbjct: 205 LRKMRNKHEIEMVGRRFKLL 224 >UniRef50_C6W196 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W196_DYAFD Length = 214 Score = 82.6 bits (203), Expect = 7e-15, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 64/192 (33%), Gaps = 9/192 (4%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYI 70 L R+G ++ + +VIF +++G ++ + L + A Sbjct: 5 IDLLIRHGAIYKKASAGEVIFLEGETGLYYHQLVDGKVAWSNFNDDGREILQELVSAGEC 64 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELR 129 G + ++ +C L + +++ ++ + LA + R Sbjct: 65 FGELPLFDQQGYACTAVAVTDCLILRLGSAAFSSMLGEHPEISLAFNKLLAQRMRFKLFL 124 Query: 130 DVQLIGHNSYEQIRATLLSMIDWNEEL----RSRIGVMNYIHQRTRISRSVVAEVLAALR 185 ++ GH+ + + + + ++ + I T + V AL Sbjct: 125 LREMAGHSPERMVERLYQYLHEHSNKVCGVCNKLLLTRQQIANLTGMRVETVIRATKALE 184 Query: 186 KGGYIEMNKGKL 197 G + + KGK+ Sbjct: 185 NQGRVNIVKGKV 196 >UniRef50_C2KT94 CRP/FNR family transcriptional regulator n=2 Tax=Mobiluncus mulieris RepID=C2KT94_9ACTO Length = 227 Score = 82.6 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 12/204 (5%) Query: 9 QEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGI 64 + F ++ K L R Q +S F + G + L R + L+ I Sbjct: 16 EFFERVMKKLGDKVNRVTMEERFQFS-NSGDPLNRVFALKSGKVKLTRLSTLGRDHLLEI 74 Query: 65 TQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLI-EQNQLWRDAFYWLAWQN 123 + GL + +N Y S + + ++ + + L A Sbjct: 75 LGPGDVFGLEALVGENVWFYTATSMESVEVTWAHVEDMRQVLADNHNLEMQLLRSFAALT 134 Query: 124 RILELRDVQLIGHNSYEQIRATLLSMIDWNEE------LRSRIGVMNYIHQRTRISRSVV 177 + R + + + ++ A LL + + E + R + Q SR Sbjct: 135 QQRYERTMTIRDLDVPGRLAAVLLYLGERFGETSEGGLVLPRGLTQRELSQMIGASRETA 194 Query: 178 AEVLAALRKGGYIEMNKGKLVAIN 201 ++LA +I + I+ Sbjct: 195 NKILADFCNRAWITHENRLITIID 218 >UniRef50_B6R2R5 Cyclic nucleotide-binding protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2R5_9RHOB Length = 230 Score = 82.6 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 63/189 (33%), Gaps = 8/189 (4%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGL 73 L R T+ + ++IF D + F++LEG + + R + ++G+ Sbjct: 21 LLRGATKKSVSRG-EMIFFQDDKADAFFIVLEGWVKVFRATSSGDEAVVGVFTRGQTFAE 79 Query: 74 ADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQ 132 ++ P + + +P I + + L+ L L+ Sbjct: 80 GAAFTNSNYPASGEAVTDSVVLCIPVAHLANSIAADPNIALAMMSSLSMHLHQLVLQIEG 139 Query: 133 LIGHNSYEQIRATLLSMIDWNEELRSRIGVMN--YIHQRTRISRSVVAEVLAALRKGGYI 190 L H +++ LL++ + + + I R + ++ L+ G Sbjct: 140 LKTHTGAQRVAEFLLNLSSEPAGSCTLVLPYDKALIAGRLGMKPESLSRAFQKLKSYGVE 199 Query: 191 EMNKGKLVA 199 +++ Sbjct: 200 VKQNRAIIS 208 >UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Polaribacter sp. MED152 RepID=A2U1H8_9FLAO Length = 259 Score = 82.6 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 69/186 (37%), Gaps = 9/186 (4%) Query: 21 YGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADG 76 + + + +F + F I +G+ + + +N ++ + + ++G Sbjct: 59 ACKTSKIIKKGEPLFIEGEHINGVFCIKDGICKVSKISDNGKNQIVNLIKKGDLIGERSL 118 Query: 77 LMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWR-DAFYWLAWQNRILELRDVQLIG 135 L + ++ + +P + + +E+NQ + D +A + + V + Sbjct: 119 LTEEVSNLNAVALEDLEVCFIPKSEIVKDLEKNQNFTMDVLKNMANSLKNADNLIVDMAQ 178 Query: 136 HNSYEQIRATLLSMIDWN---EELRSRIGVMNY-IHQRTRISRSVVAEVLAALRKGGYIE 191 + +++ TLL + EE I + I + +L+ +K GYIE Sbjct: 179 KSVKQRLAETLLKLQTKFGTTEEGNLDIHLSREDIANIIGTATESAIRLLSEFKKKGYIE 238 Query: 192 MNKGKL 197 M + Sbjct: 239 MKGKSI 244 >UniRef50_P33779 Global nitrogen regulator n=199 Tax=Cyanobacteria RepID=NTCA_SYNY3 Length = 225 Score = 82.6 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 14/214 (6%) Query: 2 LSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----E 57 L+ +PL + F+ K IF E + +L+G + L R Sbjct: 5 LTQDRPLAAVFRRLGSELMPPVVETFDRSKT-IFFPGDPAERVYFLLKGAVKLSRVYEAG 63 Query: 58 ENVLIGITQAPYIMGLADGLMKND--IPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRD 114 E + + + + + G+ + Y ++ P +Q ++++ L Sbjct: 64 EEITVALLRENSVFGVLSLVTGQRSDRFYHAVAFTPVELLSAPIEQVEQALKEHPDLSLL 123 Query: 115 AFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDW-----NEELRSRI-GVMNYIHQ 168 L+ + E+ L + ++ + LL + + +R + I + Sbjct: 124 MLQGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPAPDGIRIDLKLSHQAIAE 183 Query: 169 RTRISRSVVAEVLAALRKGGYIEMNKGKLVAINR 202 +R V +L LR+G I + K K+ N Sbjct: 184 AIGSTRVTVTRLLGDLREGNMISITKKKITVHNP 217 >UniRef50_Q8KBR5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chlorobaculum tepidum RepID=Q8KBR5_CHLTE Length = 225 Score = 82.6 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 67/198 (33%), Gaps = 13/198 (6%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIM 71 + L +Y T F Q+++S + + G + + R + + + I + Sbjct: 16 QILEKYLTLRSFRKG-QLLWSEGDTDGLLVFLKSGRVKIYRLLPMGKAITLYIFGKGSVF 74 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRD 130 G P + +C + + Q+ + LA + R Sbjct: 75 GFMPFFDDAPYPAYAQALDDCEADVISRSGLRQAVHQDPEVAIVLMKQLAQRLRDAFDTI 134 Query: 131 VQLIGHNSYEQIRATLLSMIDWNEELRSR------IGVMNYIHQRTRISRSVVAEVLAAL 184 +L + ++ A L++++D + + R + Q ++ ++ + L Sbjct: 135 ERLQSKGANPKVAAALMALMDDSPNIAGRPLFITLPVASHEFAQSLGLTPETLSRSITHL 194 Query: 185 RKGGYIE-MNKGKLVAIN 201 + ++ + + + ++ Sbjct: 195 VEKNILKRLQRNRFQILD 212 >UniRef50_A9GWE0 Global nitrogen regulatory protein, CRP family of transcriptional regulators n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GWE0_SORC5 Length = 253 Score = 82.6 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 16/200 (8%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVL----IGITQAPYIM 71 L+ GT + ++ + ++ G + L R + +G A ++ Sbjct: 50 SALADGGTIQRVAKGRHLV-TQGDAATALAMLSLGRVRLVRGMSDGRSLSLGYRGAGDVL 108 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDV 131 G A I+ + +P L+ + + A + + Sbjct: 109 GEAALGGVTAHRESAIATEDVEALLVPLATVRNLMATDANF--AAAIVTTLVERHTDTEE 166 Query: 132 QLIG---HNSYEQIRATLLSMIDW---NEELRSRIG---VMNYIHQRTRISRSVVAEVLA 182 +L N ++ LL + I + +R V L Sbjct: 167 RLASMLFRNVEARLCEFLLKAATRWGIPDPRGVLISAPFTHQEMASMIGSTRETVTLTLG 226 Query: 183 ALRKGGYIEMNKGKLVAINR 202 LR+ G IE+++ ++V ++R Sbjct: 227 DLRRKGVIEIDRRRIVVLDR 246 >UniRef50_UPI0001C312D2 transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312D2 Length = 225 Score = 82.6 bits (203), Expect = 9e-15, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 12/197 (6%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREE----NVLIGITQAPYIM 71 + L G R F ++++ + V+L+G + + +++ ++ Sbjct: 21 EALLTLGGRRRFARGERLMH-QGEPGDRVLVLLDGHVKASTSDARGRELVLSFRGPGDVL 79 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRD 130 G + + + L A + +E+ + + R Sbjct: 80 GELTFMHAEPRSSDVTAIEPVQAEALAASEFRAFLERTPTAALTLIDVIGRRFRDANRAR 139 Query: 131 VQLIGHNSYEQIRATLLSMIDWNEELRSR------IGVMNYIHQRTRISRSVVAEVLAAL 184 Q ++ ++ A L+ + + + + + T SR+ VA L L Sbjct: 140 QQFGDLDTIGRVAARLVELCERYGDRTDAGIEIGLPLTQDDLGSWTASSRAGVANALRTL 199 Query: 185 RKGGYIEMNKGKLVAIN 201 R+ G+I + ++ ++ Sbjct: 200 RELGWIATERRRITVLD 216 >UniRef50_A9B4E4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4E4_HERA2 Length = 252 Score = 82.6 bits (203), Expect = 9e-15, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 66/192 (34%), Gaps = 13/192 (6%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR----EENVLIGITQAPYIMGLADGLMK 79 R F ++ E ++IL G + + +V+I + A +G + Sbjct: 54 RRTFPAGTNLMSVE-QPGEVVYIILNGTVKIHVEQADGTDVIIAMLGAGDTVGEMSLIDS 112 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNS 138 ++++ T + + ++ + + L+ + R+ + L + Sbjct: 113 AGRSATVVTQEESTLLWMNRTAFLEALQNAPVITLNLVRMLSSRLRLANEQIQALATLDV 172 Query: 139 YEQIRATLLSMIDWNEELRSRIG-------VMNYIHQRTRISRSVVAEVLAALRKGGYIE 191 + ++ LL+ + + SR V +V+ ++ Y+ Sbjct: 173 HGRVARQLLAFAQKYGHADETGTVQIPIRLTQSDLAGLVGASRERVNQVIGYFKQRRYLS 232 Query: 192 MNKGKLVAINRL 203 +++ ++++ L Sbjct: 233 VDQHYHISLHNL 244 >UniRef50_C5SA72 Transcriptional regulator, Crp/Fnr family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA72_CHRVI Length = 218 Score = 82.2 bits (202), Expect = 9e-15, Method: Composition-based stats. Identities = 20/182 (10%), Positives = 57/182 (31%), Gaps = 17/182 (9%) Query: 34 IFSSDVNNEDTFVILEGVISLRREENV-----LIGITQAPYIMGLADGLMKND-IPYKLI 87 E + ++EG ++ + ++ +G + + + Sbjct: 32 FIRQGQAAESLYYLIEGSVAALMFDEDERRELMLAYINKGEFIGEMGLFVPQNTRSVIVR 91 Query: 88 SEGNCTGYHLPAKQTITLIEQN------QLWRDAFYWLAWQNRILELRDVQLIGHNSYEQ 141 + C + ++ L+E+ +L L+ + ++ + L + + Sbjct: 92 TRTRCKVAEITYQRLDRLLEEELAEVAKELLYSLGAQLSMRLQMTSRKVGHLAFLDVTGR 151 Query: 142 IRATLLSMIDWNEELRSR-----IGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGK 196 I TLL + + + + + SR + V+ L + G + + Sbjct: 152 IAGTLLDLCKQPDAMTHPDGMQIRVTRQELGRIVGCSREMAGRVIKNLEEQGLVSVKGKT 211 Query: 197 LV 198 +V Sbjct: 212 IV 213 >UniRef50_A1WYA2 Cyclic nucleotide-binding protein n=2 Tax=Ectothiorhodospiraceae RepID=A1WYA2_HALHL Length = 640 Score = 82.2 bits (202), Expect = 9e-15, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 4/122 (3%) Query: 12 GKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAP-YI 70 +L + L G + + D + + +++ EG + LR + + + P + Sbjct: 34 EQLLRALLARGRVHHLESGDVLFHLGDPDRDTLYILYEGRVELR--DAHNVVTVREPVTL 91 Query: 71 MGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQN-QLWRDAFYWLAWQNRILELR 129 +GL+ + +P + TL ++ L +A + R + Sbjct: 92 LGLSSYFDDEPYTLTARATRPSLVVGIPFEDVRTLEREHPPLADALSRIIADRIRANSWQ 151 Query: 130 DV 131 Sbjct: 152 HR 153 >UniRef50_Q1VU70 Transcriptional regulator (Crp family) protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VU70_9FLAO Length = 232 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 56/183 (30%), Gaps = 9/183 (4%) Query: 29 NEKQVIFSSDVNNEDTFVILEGVISLRR---EENVLIGITQ-APYIMGLADGLMKNDIPY 84 + +F D F I+ G + ++ I +G L + Sbjct: 37 KKGNALFYEDGIPTGIFHIVSGRAKKFKKGFSNHLQIFYIYTPGDFLGYHALLGEERYQD 96 Query: 85 KLISEGNCTGYHLPAKQTITLIEQNQLWRDAF-YWLAWQNRILELRDVQLIGHNSYEQIR 143 + + + + L++ +DAF ++ + +L L + ++ Sbjct: 97 SCEALDDVELKFISKDNFLKLLQDLPSLKDAFIKNMSHEFGVLANTIAVLAQKDQNTRLA 156 Query: 144 ATLLSMIDWNEELRSRIGVMN----YIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVA 199 LL + + ++ + SR + L + G I + K + Sbjct: 157 IFLLVFEHRFKAMIPNYKGIDLSREDLANCIGTSRESLGRSLKQFKDDGLISIKKRCIFI 216 Query: 200 INR 202 IN+ Sbjct: 217 INK 219 >UniRef50_B2UG02 Transcriptional regulator, Crp/Fnr family n=2 Tax=Ralstonia pickettii RepID=B2UG02_RALPJ Length = 243 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 63/183 (34%), Gaps = 9/183 (4%) Query: 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPY 69 L ++ + + + V + F+I+ G + + R + ++ G+ +A Sbjct: 40 LLAEIAPTARVITYPDGECV-HPHGGPAQGMFLIMRGRVRISRTTDGGSELVYGVLRAGE 98 Query: 70 IMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQL--WRDAFYWLAWQNRILE 127 G + + ++G T L + ++ W L + R++ Sbjct: 99 WFGEIALIDGGGRTHSAHAQGPTTLVLLGSAAFARVVSAYPAGMW-ALMQQLCQRIRLIF 157 Query: 128 LRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKG 187 + ++ LL + + R+ + + SR +++ L A ++ Sbjct: 158 DEFEHASEMPADARLAQRLLQLARA-GDGRTVAASNEELGRMLARSRQTISKYLQAWQRA 216 Query: 188 GYI 190 G+I Sbjct: 217 GWI 219 >UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNU9_9CLOT Length = 229 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 56/173 (32%), Gaps = 7/173 (4%) Query: 24 RFEFNNEKQVIFSSDVNNEDTFVILEGVISLR----REENVLIGITQAPYIMGLADGLMK 79 + Q+I+ + + + I +G + + I I + I+G A Sbjct: 37 PTRTYEKDQMIYWQEEQADCFYCIKKGRVKVFLSSENGMEKTITIVEQG-ILGEAAFFDH 95 Query: 80 NDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRDVQLIGHNS 138 + + I Q+ L +A + R+L + + + Sbjct: 96 MPRVSSAKALVKTELIAINRNGLIKSFSQDPDLAVHLLELMAHRVRLLSEQVDNMTFLQA 155 Query: 139 YEQIRATLLSMIDWNEELRSRIG-VMNYIHQRTRISRSVVAEVLAALRKGGYI 190 +++ LL E+ ++ I +R V+++L K G+I Sbjct: 156 DQRVAQALLRHAVPGEDGILQVNLTHEEIANLAGTTRVTVSKLLTRFAKNGWI 208 >UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y851_NITMU Length = 263 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 14/201 (6%) Query: 16 KCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYIM 71 L R + + +V++ E +VI G + ++G A ++ Sbjct: 42 SLLERVVKKKQVFKRGEVLYRMGQPLEYIYVIRGGSVKTCVSTEDGQVQVMGFHAAGELL 101 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQNRILELRD 130 GL + + + + + G + + ++ L +++ + + ++ + + Sbjct: 102 GL-NAISNREHKCEARAMGVTSVCEVSVERFEELAKKDPAIQYEILKIMSAEIHHGQELL 160 Query: 131 VQLIGHNSYEQIRATLLSMIDWNEELRSRIG------VMNYIHQRTRISRSVVAEVLAAL 184 + L HN+ E+I LL++ E+ + I I+ V + A Sbjct: 161 LLLGKHNAEERIAIFLLNLSRQFEQRHCSATEFTLCMSRSDIGNYLGIAEETVCRIFARF 220 Query: 185 RKGGYI--EMNKGKLVAINRL 203 + G I E KL I RL Sbjct: 221 QDDGLISSEYRNVKLKDIKRL 241 >UniRef50_Q16C25 Cyclic nucleotide-binding protein, putative n=4 Tax=Rhodobacterales RepID=Q16C25_ROSDO Length = 220 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 73/192 (38%), Gaps = 11/192 (5%) Query: 18 LSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREEN----VLIGITQAPY--IM 71 LS+ + E QV F + F + +G I + + + +++ A ++ Sbjct: 23 LSKVARKIELPAGAQV-FGPTNIPDSLFFLYDGRIRVSQSSDTGRDIVLYRVDAGESCVL 81 Query: 72 GLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDA-FYWLAWQNRILELRD 130 A L + + I+E + T LP L+ + + +R F + + L Sbjct: 82 TTACMLAEEAYNAEGIAETDITAIVLPKLAFDRLVAEEEAFRKFVFAAYSRRLIDLLRVV 141 Query: 131 VQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYI 190 + + ++ LL++ + + + +R V++ +L +K I Sbjct: 142 DDVAFGHMDVRLAERLLTLA---GDFKEVAATHQQLASELGTAREVISRILQDFQKREMI 198 Query: 191 EMNKGKLVAINR 202 ++G++ +++ Sbjct: 199 AQSRGRIALLDK 210 >UniRef50_P22260 Catabolite activation-like protein n=26 Tax=Gammaproteobacteria RepID=CLP_XANCP Length = 230 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 20/203 (9%) Query: 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENV----LIGITQAPYI 70 + + R + +F + ++ G +S+ EE+ ++G + Sbjct: 27 IERFLAHSHRRR-YPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEF 85 Query: 71 MGLADGLMKND-IPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWL-------AWQ 122 +G +++D L + C + ++ L Q L DA L + + Sbjct: 86 VGEMGLFIESDTREVILRTRTQCELAEISYERLQQLF-QTSLSPDAPRILYAIGVQLSKR 144 Query: 123 NRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVM-----NYIHQRTRISRSVV 177 + +L + ++I TL + E + G + + SR + Sbjct: 145 LLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQELARLVGCSREMA 204 Query: 178 AEVLAALRKGGYIEMNKGKLVAI 200 VL L+ G + +GK V + Sbjct: 205 GRVLKKLQADGLLH-ARGKTVVL 226 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.152 0.393 Lambda K H 0.267 0.0468 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,137,056,304 Number of Sequences: 3077464 Number of extensions: 40866496 Number of successful extensions: 149354 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 619 Number of HSP's successfully gapped in prelim test: 2682 Number of HSP's that attempted gapping in prelim test: 146287 Number of HSP's gapped (non-prelim): 3870 length of query: 207 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 84 effective length of database: 661,868,284 effective search space: 55596935856 effective search space used: 55596935856 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 90 (39.1 bits)