BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (242 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae Rep... 486 e-136 UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=... 204 2e-51 UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK... 161 2e-38 UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID... 154 2e-36 UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp... 152 6e-36 UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638... 120 6e-26 UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serrati... 111 2e-23 UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK... 108 1e-22 UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=... 97 4e-19 UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenopho... 83 9e-15 UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly... 60 7e-08 UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK... 57 7e-07 UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkhol... 51 3e-05 UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK... 50 9e-05 UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9... 49 1e-04 UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enter... 49 1e-04 UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrio... 48 3e-04 UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 T... 45 0.003 UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovo... 40 0.094 >UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae RepID=TRAK2_ECOLX Length = 242 Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust. Identities = 239/242 (98%), Positives = 240/242 (99%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 MRKNNTAIIFG LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA Sbjct: 1 MRKNNTAIIFGGLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD Sbjct: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD+V Sbjct: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADSV 180 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 WTGNHLKMVRF VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE Sbjct: 181 WTGNHLKMVRFVVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 Query: 241 GN 242 GN Sbjct: 241 GN 242 >UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=Q4LC34_SODGL Length = 206 Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 136/200 (68%) Query: 41 IAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLN 100 + +SNT PNLF+VPGD ++AV+ +D +L TA+G ++++T+NKKPFTF++ET RGLN Sbjct: 1 MVLSNTEPNLFSVPGDSVVAVSGIDESLVRYAPTANGALMLSTLNKKPFTFVIETARGLN 60 Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQV 160 S++AVP+ G+GRT LV + +G A WE S PYES+LV ++QA+ G+LPAG+ + Sbjct: 61 FSLRAVPQAGSGRTFSLVGEGQGVSVAAKVWEQSVPYESMLVALNQALMAGRLPAGYGKA 120 Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQ 220 P T E L PAGL + A VW G+ LK+VRF V N + + + E DFWQPG AVMF Sbjct: 121 PATHERLPLPAGLWAEALWVWKGHRLKVVRFRVTNPGTTPVRVNEPDFWQPGVWAVMFDT 180 Query: 221 PASQLLAGARMDVYVIRDGE 240 P +++ RM V+V GE Sbjct: 181 PTREIVPAGRMGVWVTLSGE 200 >UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK n=4 Tax=Enterobacteriaceae RepID=B5PME8_SALET Length = 246 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 2/242 (0%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N A +FG+ AA +P + + GGQ ++ISNT PN+ +PGD++ A Sbjct: 1 MKNNLPAFLFGTAMMVVMPPAAQAQ-SPATISLPQGGQFRLSISNTDPNMIFIPGDKVTA 59 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 + + G L + T +GGV+ +V + FT +ET G S+ A P +G GR +L+S Sbjct: 60 ITAPGGMLADKRLTTAGGVLFTSVATRTFTIFVETALGQTFSVVATPVKGEGRVYRLMSA 119 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 + E WET+ YE LL+++++AV G +P G+ +V + ++ P G S Sbjct: 120 EPPSRPETRKWETAQAYEKLLISLNRAVLTGDIPDGYGEVKPLSDGIRLPGGFSVTPLKA 179 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR-DG 239 W G+ L+ R+ + N +RE DFW+PG RAVMF A L+ G RM V VIR +G Sbjct: 180 WAGDQLRADRYELRNANTWGGALREQDFWKPGVRAVMFDNNAQALMGGGRMTVTVIRGNG 239 Query: 240 EG 241 EG Sbjct: 240 EG 241 >UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF3_ECOSE Length = 259 Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 6/232 (2%) Query: 15 FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTN---- 70 +C V AA P VP+ QA IA+SNT PNL VPGDRI+AV+S G TN Sbjct: 23 LACGVQAAPSAQLPVRVPVSPDAQARIALSNTQPNLLVVPGDRIVAVDSAQGTFTNAGDY 82 Query: 71 -NEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAG 129 A+GGVV+ T PFTF + TE GL +S+ P+ GR + L+SD + A Sbjct: 83 GQTGMANGGVVLMTEKTTPFTFYVRTEGGLVVSVIGQPQARDGRVVHLMSDQPVRQKAAA 142 Query: 130 AWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKE-TLQAPAGLSSVADAVWTGNHLKM 188 WE S Y +LLV + +A+ G++P G+ PV E PAGL+ A+ +W+G+ L++ Sbjct: 143 PWERSHDYVALLVDVQKALLRGEVPPGYVASPVVGEPVFSLPAGLTLRAEHMWSGDALRV 202 Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 R+ V N+ A + E F PG R+V+ S A LL GA +V+V + E Sbjct: 203 YRYRVSNRQSEARALPERLFSAPGVRSVLISPWAETLLPGASAEVWVTVEQE 254 >UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUD0_AERS4 Length = 242 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 5/205 (2%) Query: 36 GGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILET 95 GG + ISN +PNL VPGDR+ ++S G LT+ + T +G + +T + KPFT +ET Sbjct: 37 GGHLDLPISNVNPNLIVVPGDRVTNISSAAGLLTDKKNTQAGAALFSTASDKPFTLYVET 96 Query: 96 ERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPA 155 G SI A PR GR+ +L A WET+ PYES+LV +++A LP Sbjct: 97 RLGQVFSINATPRATEGRSYRLFPTTPTPRPVAKVWETAQPYESMLVALNRA-----LPE 151 Query: 156 GWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRA 215 G+ + KE AGL + D+ W GN L +VR+ + N + +RE DFW PGTRA Sbjct: 152 GYGPASIDKEAPFTRAGLQATPDSAWDGNALHIVRYRLTNPLSVPVVLREPDFWMPGTRA 211 Query: 216 VMFSQPASQLLAGARMDVYVIRDGE 240 +M +L+AGA +YVIR E Sbjct: 212 IMVHPRYQRLIAGASTWLYVIRTQE 236 >UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS3_ENT38 Length = 246 Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 127/238 (53%), Gaps = 9/238 (3%) Query: 7 AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66 A++ S F+ + AA AP +P N ++ +SNT+P V G+ I +++ G Sbjct: 11 AVLLASGIFTSGLRAAT---APAAIPFENDAAFNVTLSNTNPTKVVVDGELITSISGPTG 67 Query: 67 ALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQL--VSDLRGT 124 A + T G ++++ + + FT ++T+ G +LS+ P+ G G+T++ +S Sbjct: 68 AY-DQSTTDDGALILSPLVGQNFTLFIQTDHGSSLSLNVRPQAGNGKTLRFTPMSPPLRK 126 Query: 125 GEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVWTG 183 ++A AWE YE LV +S+AV G++P + + PV++ T P+ + + + G Sbjct: 127 NDDAKAWEEGQTYEKTLVALSRAVVNGQVPDDYVEYPVSRMTAYTPSTPVRLTPERQFVG 186 Query: 184 NHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241 NHL++VRF + N ++RE DFW G RAVM SQ +QL AG +V+ +G Sbjct: 187 NHLRIVRFRMNNPGSITQSLRERDFWLKGVRAVMLSQ--NQLYAGGEGYAWVVFSDDG 242 >UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S163_SEROD Length = 245 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 123/246 (50%), Gaps = 9/246 (3%) Query: 1 MRKNNTAIIFGSL-FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII 59 MR I+ G L FS SV A+ V N Q + +S+T+PN V G+ I Sbjct: 1 MRLAAPVIVLGILSAFSVSVAASAANRDAKSVYFTNEDQLPVTLSSTNPNKIIVEGELIT 60 Query: 60 AVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV- 118 + G T G +++A + FT ++T+RG ++S+ G GRT +L+ Sbjct: 61 NIYG-PGNAYEERNTDDGALMIALNSAATFTLYVQTDRGSSVSLNVTAVSGPGRTYELIP 119 Query: 119 -SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSV 176 S + E+A AWE S PY L++I+QAV G +P + + PV++ AP GL Sbjct: 120 RSLPKIDNEDAKAWEESQPYVDTLMSIAQAVVNGDVPPDFVEYPVSRAAAYAPPIGLQFF 179 Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 A+ W G+HL++ R+ ++N + ++ +E F+ PG R + S L G + V+VI Sbjct: 180 AEKQWIGSHLRVTRYRMKNLSNLSMAFKERQFYVPGVRGISLS--TQSLFPGGQGYVWVI 237 Query: 237 R--DGE 240 DGE Sbjct: 238 SRFDGE 243 >UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK n=2 Tax=Pantoea sp. At-9b RepID=C8QE99_9ENTR Length = 245 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 8/212 (3%) Query: 35 NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILE 94 N +SNTSPN + G+ I AV +GA T + TA G +++ + + FT +E Sbjct: 35 NNAHLKAQMSNTSPNKIVIDGELITAVTGPEGAYTK-DSTADGALLITPLTGQDFTLFIE 93 Query: 95 TERGLNLSIQAVPREGAGRTIQLV-SDLR-GTGEEAGAWETSTPYESLLVTISQAVRGGK 152 T G+++S+ P+ G+GRT++L+ +D+ +A AWE S P++ LV++++ V G Sbjct: 94 TAGGVSVSLDVSPKPGSGRTLELIPADVPLKPNPDAKAWEESQPFQKTLVSVARTVANGG 153 Query: 153 LPAGWYQVPVTK-ETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQP 211 +P G+ + ++ PAG+ + G+HL+++R+ ++N + E FWQ Sbjct: 154 VPDGYTDMKASRAPAYNPPAGVLLTPERQLAGSHLRVMRYRMKNTGYVTRTLSEKQFWQQ 213 Query: 212 GTRAVMFSQPASQLLAGARMDVYVI--RDGEG 241 G RAVM S L A V+VI D EG Sbjct: 214 GVRAVMLS--TRTLYANGEGYVWVIFSTDKEG 243 >UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB08_ERWT9 Length = 248 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 8/206 (3%) Query: 38 QASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVV-VATVNKKPFTFILETE 96 Q + A S SPN V G++I ++ GA + +Q G ++ +A + FT + T+ Sbjct: 38 QVNAAFSQVSPNRIIVQGEKITDISGPGGAFDSQKQPDGGALISLAPGVSQSFTLFVVTD 97 Query: 97 RGLNLSIQAVPREGAGRTIQLV---SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKL 153 + LSI+ +P+ G+T+ V + ++ EE +WE YE LV IS+++ G + Sbjct: 98 KNSALSIEIIPKSIPGKTLSFVPQTAPMKVKPEEK-SWEEGQSYEKTLVDISKSIINGVI 156 Query: 154 PAGWYQVPVTKETLQAPA-GLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPG 212 P + + PV++ +PA G++ AD + G H+++VR+ + N + ++ E F+ PG Sbjct: 157 PQDFSEYPVSRVQAYSPAVGVTLRADKHFIGPHMRIVRYIMNNPSYLNQDLTEKQFYAPG 216 Query: 213 TRAVMFSQPASQLLAGARMDVYVIRD 238 RAVM S L + YVI D Sbjct: 217 VRAVMLS--TRNLYSHGEGYAYVIFD 240 >UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenophonus nasoniae RepID=D2U002_9ENTR Length = 227 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 11/228 (4%) Query: 13 LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE 72 + S S+ A N T+ P V +++SN PN+ V DRI+ NS G L + + Sbjct: 1 MLISTSIWAENLTVTPHSV-------VRLSVSNREPNVIAVMNDRIVEANSAAGKLADKK 53 Query: 73 QTASGGVVVATVNKKPFTFILETERGLNLSIQAVP-REGAGRTIQLVSDLRGTGEEAGAW 131 T SG ++ T PF+ +ETE+G ++ A+P ++ G + +++ A W Sbjct: 54 ATDSGALIFTTEETTPFSLYIETEKGFGFTVNAIPVKKSQGINVSVMNAEAKADSSAQEW 113 Query: 132 -ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLS-SVADAV-WTGNHLKM 188 +TS Y + A +P G+ + A A + D+V + G ++++ Sbjct: 114 GKTSDSYSQFITRTFTAAMNDNIPTGFVKNGRVNVNWSASALANFRFRDSVSFQGKNIRL 173 Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 +R VENKT + + E FW T A+ F+ + L ++ ++++ Sbjct: 174 LRVNVENKTSQPIQLNERVFWVLQTMAIAFNPTVNTLRPHEQVTLFLL 221 >UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly protein TraK n=2 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T4_LISDA Length = 243 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 20/232 (8%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M K + +L F+ +V+A AP V + S+ +S+ N V D+I + Sbjct: 1 MSKYPAVLGLCALIFAPTVLAT----APNTVLFSDNETVSVNLSSLDINRLVVKDDKITS 56 Query: 61 V-----------NSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109 V N +D + T G +++ +PFT + TE+G + + P Sbjct: 57 VTCPTGFCTMPANPVDESGTGAPVDPQGAGLISLNVLEPFTLYITTEKGRSFGVFVRPLA 116 Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGW--YQVPVTKETL 167 T +S R T ++A +E +PY L + + +P G+ ++ V K Sbjct: 117 VPAITTVFLSTERDT-QKAQEFEKQSPYTQTLAALISHMIKETIPEGFAFQRLTVKKPIE 175 Query: 168 QAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFS 219 QA L+ +A + G HL + + NKT + + + F++ G +AV FS Sbjct: 176 QAKLLLTPIAS--YQGEHLTGISVKISNKTAQYIQVEPTSFYKAGVKAVSFS 225 >UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK n=6 Tax=Shewanella baltica RepID=A6WUR6_SHEB8 Length = 272 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 49/279 (17%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N + F SV+AAN P + I +S+ N V GD+I + Sbjct: 1 MKIANPLVFAACALFPMSVLAAN--TPPKHYGFNDSETVPIELSSVDINRLVVEGDKITS 58 Query: 61 VNSLDG--ALTNNEQTASGGVVVATVNKKPFTFILETER----GLNLSIQAVPREGAGRT 114 ++ +G +T + SG V PFT + TE+ GL +S +A+P A + Sbjct: 59 IDCPEGFCVVTGTKSDKSGAARVNLNLAMPFTAYVSTEKGRHFGLFISPKAIP---AVTS 115 Query: 115 IQLVSDLRGTGEEAGAWETSTPYESLLVTIS-QAVR---GGKLPAGWYQVPVTKETLQ-- 168 I R E+ ++ TPY +++ + Q +R GK P Y+V V + L+ Sbjct: 116 IFTAEHYR--EEQPSVFDKKTPYPTMMTEFTAQMIRYLATGK-PIDGYRVHVVNDDLERT 172 Query: 169 ---------------------------APAGLSSVADAVWTGNHLKMVRFAVENKTLSAL 201 PAGL++ V+TG H + + V N + Sbjct: 173 TVDSEPRGTETSIDDAMFTRLNEQQMPKPAGLTTEPAFVFTGKHFNGIIYRVTNHAALPV 232 Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 + + F+ P TRA S +L ++V+ GE Sbjct: 233 TLTTAQFYSPTTRAAALS--TYELAPKQTGHLFVVSGGE 269 >UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=B3DCS7_BURM1 Length = 319 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 13/208 (6%) Query: 35 NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVN---KKPFTF 91 N G ++ +S PN +P V++ D + EQ S V V N + + Sbjct: 112 NTGNKTVYLSADEPNRILLPFKNAYIVHTSDVQVDKREQ--SNNVYVYWTNAPSQARHLY 169 Query: 92 ILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTP---YESLLVTISQAV 148 I + G L + VP++ +TI + D TG +G S+P Y S + + A+ Sbjct: 170 IEPPDGGSALGLAIVPKKIPAQTILVTDD---TGIVSGRRPKSSPGSEYTSHIQDLMAAI 226 Query: 149 RGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF 208 GK P G+ QV + + A GLS+ D ++ + + V N T S +RE +F Sbjct: 227 ALGKAPDGFSQVDIQLPPI-AMNGLSATVDTRYSSQEGDLYVYTVRNPTQSRAVLREEEF 285 Query: 209 WQPGTRAVMFSQPASQLLAGARMDVYVI 236 P AV P LL G + V V+ Sbjct: 286 DGPEVIAVSI-YPKPVLLPGEKTRVIVM 312 >UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK n=2 Tax=Legionella RepID=D1RMP1_LEGLO Length = 239 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 11/215 (5%) Query: 15 FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGAL-----T 69 F+ S+ A N T+A + G + ++++S+ + N V G+RI+ V+ + + Sbjct: 13 FATSLHAGN-TVA--TLKFEEGERFALSLSSLNFNRIDVEGERIVKVSFPEHSFIIEQSK 69 Query: 70 NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAG 129 +E G VV+ + P T T + S P E G+TI+LVS + A Sbjct: 70 ESEDDLDGAVVLKPLAHIPLTVYFTTNLNHHFSATVSPTEDLGKTIKLVSKKLKGFDYAK 129 Query: 130 AWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMV 189 A E S +S L+T A+ G P+G+ +V + T + L G Sbjct: 130 AQEQSQYQQSDLMT---ALMEGTTPSGFQEVGIKPTTFRLHKHLKVTLVKQVRGKESSGY 186 Query: 190 RFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQ 224 + +EN++ + + S F P + S+ Q Sbjct: 187 VYRIENQSNKPMELTASLFEHPKLMTMELSEKMLQ 221 >UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9_9GAMM Length = 239 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 28/224 (12%) Query: 14 FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV----NSLDGALT 69 S M AN +P+ ++ +S + N V D+II NS+ A+ Sbjct: 11 LISTMTMGANS------IPVKENSDIALTLSQNNYNRIVVKNDKIIEAVFPPNSM--AIK 62 Query: 70 NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAG 129 +EQ S V+++ N PFT + TE+G + S+ E G+TI+LVS + + Sbjct: 63 RDEQDGSVYVMLSATN--PFTLFVTTEKGTHFSVTLNGEESLGKTIELVSPPQ---PKVV 117 Query: 130 AWETSTPYESLLVTISQAVRGGKL--------PAGWYQVPVTKETLQA---PAGLSSVAD 178 A + +T +++ +AV L + V + ++ +A GL+ + Sbjct: 118 ASQANTTKDNMKTITQEAVPEAILALLTHMEQHKPFADVRIKRQFGKAQRWSKGLTLLPK 177 Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPA 222 W G LK + N+ L + + F + GT A+ FS+P+ Sbjct: 178 ESWDGKLLKGETIELYNRGKEPLELSQEWFAKVGTLAIKFSKPS 221 >UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enterobacteriaceae RepID=Q2VP23_ECOLX Length = 198 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N A++ G+ S + +P + GQ ++ISNT PN+ +PGD++ A Sbjct: 1 MKNNFPALLLGTALMITSPVTVYAQ-SPATLSFPQRGQFRLSISNTDPNMIFIPGDKVTA 59 Query: 61 VNSLDGALTNNEQTASGGVVVATV 84 + + +G L + T++GGV+ +V Sbjct: 60 ITAQNGMLADKRLTSAGGVLFTSV 83 >UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrionales RepID=B6ESX6_ALISL Length = 251 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 16/224 (7%) Query: 26 LAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTN--NEQTASGGVVVAT 83 L P + I +S+ + N V D+II ++ G T+ N+Q ASG + + Sbjct: 29 LPSNTYPFNDNDTVPIVLSSLNINRLVVRDDKIIGLDCPTGFCTSKGNKQDASGSITLRL 88 Query: 84 VNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTG---EEAGAWETSTPYESL 140 PFT + T+ G N ++ PR LVS+ GT +E + Y + Sbjct: 89 NIALPFTAQVTTKNGRNFTLFITPRAIPA----LVSEFIGTANTRQEKSVFTRDFDYPTA 144 Query: 141 LVTISQAV----RGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVWTGNHLKMVRFAVEN 195 L ++++ G L G+ V TL L+ + V+ G + + V N Sbjct: 145 LTQFTKSMMLWSERGFLIDGFSLHHVDPSTLPKDTNPLAIIPQTVFVGKEYSGIIYRVLN 204 Query: 196 KTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239 ++ + + S F+ TR+ ++ LL M +Y++ G Sbjct: 205 QSSGQVTLSTSQFYSYSTRSAAITK--DTLLPNEDMTLYIVTGG 246 >UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS1_LEGPH Length = 237 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 4/135 (2%) Query: 87 KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQ 146 + FT L TE+GL +++ P+ A +TI + R A A TS+ YE ++V + Sbjct: 91 RAFTINLLTEKGLFYNVRVEPKPIASQTI-VFKSYRNPVIRARAPHTSS-YEKVMVGFLR 148 Query: 147 AVRGGKLPAGWYQ-VPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRE 205 A+ G LP G+ Q +P +A V GN ++ F ++N T ++ +E Sbjct: 149 ALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRLLTV-NGNRMRGEIFELKNVTNQPIDAKE 207 Query: 206 SDFWQPGTRAVMFSQ 220 S F PGT+ V ++ Sbjct: 208 SWFNWPGTKGVALAK 222 >UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WDF8_ACISJ Length = 245 Score = 39.7 bits (91), Expect = 0.094, Method: Compositional matrix adjust. Identities = 52/241 (21%), Positives = 94/241 (39%), Gaps = 13/241 (5%) Query: 10 FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII-AVNSLDGAL 68 ++ S++A A VV + G + IS N + G RI V S+ G L Sbjct: 9 LSAILLLTSLLATEAG-ATQVVENADRGHVQVNISVNETNRLAIDGRRIANVVPSVKGVL 67 Query: 69 TNNEQTASGGVVVATVNKKP----FTFILETERGLNLSIQAVPREGAGRTIQLV--SDLR 122 + A G ++ P T + E+G+ + VPR AG I + S+ Sbjct: 68 AGQKDEALGAYYFTLASESPNQGTVTVFVSDEKGVTYKLILVPRPVAGEEIIIRPPSEKA 127 Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET-LQAPAGLSSVADAVW 181 A A + Y+ + + + +L + V KE L L VA + Sbjct: 128 TPSSRAAADGRTVSYQRRIKDLMLVMADDELKDSVETIQVNKEVPLWKEGRLILVAK--Y 185 Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241 + ++ + N + S + + E + ++ G RA+ L+ G D+Y++R+ + Sbjct: 186 MDGEVVGEKYRLTNVSPSEMLLVEQELYRRGVRAIAVEH--HTLMQGDGTDIYIVRERKD 243 Query: 242 N 242 N Sbjct: 244 N 244 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae Rep... 307 1e-82 UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK... 262 9e-69 UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serrati... 250 4e-65 UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638... 246 5e-64 UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID... 236 5e-61 UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=... 234 2e-60 UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp... 232 9e-60 UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=... 221 2e-56 UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK... 220 5e-56 UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK... 205 9e-52 UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK... 197 2e-49 UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrio... 195 1e-48 UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenopho... 191 1e-47 UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly... 190 3e-47 UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9... 173 7e-42 UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkhol... 163 6e-39 UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enter... 91 4e-17 Sequences not found previously or not previously below threshold: UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photoba... 151 2e-35 UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 T... 106 7e-22 UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acineto... 100 4e-20 UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly... 97 5e-19 UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovo... 91 3e-17 UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acineto... 86 9e-16 UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobaci... 84 5e-15 UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderial... 83 8e-15 UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatole... 79 9e-14 UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax... 79 2e-13 UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepI... 78 3e-13 UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosph... 77 5e-13 UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylo... 77 6e-13 UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly... 77 6e-13 UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Maripro... 74 5e-12 UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia c... 71 5e-11 UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas Re... 70 8e-11 UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax... 69 1e-10 UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2 68 2e-10 UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythro... 65 2e-09 UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvula... 64 4e-09 UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=... 62 1e-08 UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK... 61 4e-08 UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkhol... 59 2e-07 UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingo... 55 2e-06 UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betapro... 54 3e-06 UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Perseph... 54 6e-06 UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candida... 53 8e-06 UniRef50_C9NP33 Type III secretion system outer membrane pore Ys... 52 1e-05 UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfu... 52 1e-05 UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus... 52 2e-05 UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingo... 52 2e-05 UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rh... 51 3e-05 UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1 51 4e-05 UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkhol... 49 1e-04 UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersini... 44 0.003 >UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae RepID=TRAK2_ECOLX Length = 242 Score = 307 bits (787), Expect = 1e-82, Method: Composition-based stats. Identities = 239/242 (98%), Positives = 240/242 (99%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 MRKNNTAIIFG LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA Sbjct: 1 MRKNNTAIIFGGLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD Sbjct: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD+V Sbjct: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADSV 180 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 WTGNHLKMVRF VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE Sbjct: 181 WTGNHLKMVRFVVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 Query: 241 GN 242 GN Sbjct: 241 GN 242 >UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK n=4 Tax=Enterobacteriaceae RepID=B5PME8_SALET Length = 246 Score = 262 bits (668), Expect = 9e-69, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 2/242 (0%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N A +FG+ AA +P + + GGQ ++ISNT PN+ +PGD++ A Sbjct: 1 MKNNLPAFLFGTAMMVVMPPAAQAQ-SPATISLPQGGQFRLSISNTDPNMIFIPGDKVTA 59 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 + + G L + T +GGV+ +V + FT +ET G S+ A P +G GR +L+S Sbjct: 60 ITAPGGMLADKRLTTAGGVLFTSVATRTFTIFVETALGQTFSVVATPVKGEGRVYRLMSA 119 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 + E WET+ YE LL+++++AV G +P G+ +V + ++ P G S Sbjct: 120 EPPSRPETRKWETAQAYEKLLISLNRAVLTGDIPDGYGEVKPLSDGIRLPGGFSVTPLKA 179 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD-G 239 W G+ L+ R+ + N +RE DFW+PG RAVMF A L+ G RM V VIR G Sbjct: 180 WAGDQLRADRYELRNANTWGGALREQDFWKPGVRAVMFDNNAQALMGGGRMTVTVIRGNG 239 Query: 240 EG 241 EG Sbjct: 240 EG 241 >UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S163_SEROD Length = 245 Score = 250 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 122/245 (49%), Gaps = 7/245 (2%) Query: 1 MRKNNTAIIFGSL-FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII 59 MR I+ G L FS SV A+ V N Q + +S+T+PN V G+ I Sbjct: 1 MRLAAPVIVLGILSAFSVSVAASAANRDAKSVYFTNEDQLPVTLSSTNPNKIIVEGELIT 60 Query: 60 AVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV- 118 + G T G +++A + FT ++T+RG ++S+ G GRT +L+ Sbjct: 61 NIYGP-GNAYEERNTDDGALMIALNSAATFTLYVQTDRGSSVSLNVTAVSGPGRTYELIP 119 Query: 119 -SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSV 176 S + E+A AWE S PY L++I+QAV G +P + + PV++ AP GL Sbjct: 120 RSLPKIDNEDAKAWEESQPYVDTLMSIAQAVVNGDVPPDFVEYPVSRAAAYAPPIGLQFF 179 Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 A+ W G+HL++ R+ ++N + ++ +E F+ PG R + S L G + V+VI Sbjct: 180 AEKQWIGSHLRVTRYRMKNLSNLSMAFKERQFYVPGVRGISLS--TQSLFPGGQGYVWVI 237 Query: 237 RDGEG 241 +G Sbjct: 238 SRFDG 242 >UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS3_ENT38 Length = 246 Score = 246 bits (627), Expect = 5e-64, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 127/241 (52%), Gaps = 9/241 (3%) Query: 4 NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63 A++ S F+ + AA AP +P N ++ +SNT+P V G+ I +++ Sbjct: 8 AAAAVLLASGIFTSGLRAAT---APAAIPFENDAAFNVTLSNTNPTKVVVDGELITSISG 64 Query: 64 LDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQL--VSDL 121 GA + T G ++++ + + FT ++T+ G +LS+ P+ G G+T++ +S Sbjct: 65 PTGAY-DQSTTDDGALILSPLVGQNFTLFIQTDHGSSLSLNVRPQAGNGKTLRFTPMSPP 123 Query: 122 RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAV 180 ++A AWE YE LV +S+AV G++P + + PV++ T P+ + + Sbjct: 124 LRKNDDAKAWEEGQTYEKTLVALSRAVVNGQVPDDYVEYPVSRMTAYTPSTPVRLTPERQ 183 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 + GNHL++VRF + N ++RE DFW G RAVM SQ +QL AG +V+ + Sbjct: 184 FVGNHLRIVRFRMNNPGSITQSLRERDFWLKGVRAVMLSQ--NQLYAGGEGYAWVVFSDD 241 Query: 241 G 241 G Sbjct: 242 G 242 >UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF3_ECOSE Length = 259 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 131/241 (54%), Gaps = 8/241 (3%) Query: 6 TAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLD 65 + SL +C V AA P VP+ QA IA+SNT PNL VPGDRI+AV+S Sbjct: 16 AVALLCSL--ACGVQAAPSAQLPVRVPVSPDAQARIALSNTQPNLLVVPGDRIVAVDSAQ 73 Query: 66 GALTN-----NEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 G TN A+GGVV+ T PFTF + TE GL +S+ P+ GR + L+SD Sbjct: 74 GTFTNAGDYGQTGMANGGVVLMTEKTTPFTFYVRTEGGLVVSVIGQPQARDGRVVHLMSD 133 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET-LQAPAGLSSVADA 179 + A WE S Y +LLV + +A+ G++P G+ PV E PAGL+ A+ Sbjct: 134 QPVRQKAAAPWERSHDYVALLVDVQKALLRGEVPPGYVASPVVGEPVFSLPAGLTLRAEH 193 Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239 +W+G+ L++ R+ V N+ A + E F PG R+V+ S A LL GA +V+V + Sbjct: 194 MWSGDALRVYRYRVSNRQSEARALPERLFSAPGVRSVLISPWAETLLPGASAEVWVTVEQ 253 Query: 240 E 240 E Sbjct: 254 E 254 >UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=Q4LC34_SODGL Length = 206 Score = 234 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 136/201 (67%) Query: 41 IAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLN 100 + +SNT PNLF+VPGD ++AV+ +D +L TA+G ++++T+NKKPFTF++ET RGLN Sbjct: 1 MVLSNTEPNLFSVPGDSVVAVSGIDESLVRYAPTANGALMLSTLNKKPFTFVIETARGLN 60 Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQV 160 S++AVP+ G+GRT LV + +G A WE S PYES+LV ++QA+ G+LPAG+ + Sbjct: 61 FSLRAVPQAGSGRTFSLVGEGQGVSVAAKVWEQSVPYESMLVALNQALMAGRLPAGYGKA 120 Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQ 220 P T E L PAGL + A VW G+ LK+VRF V N + + + E DFWQPG AVMF Sbjct: 121 PATHERLPLPAGLWAEALWVWKGHRLKVVRFRVTNPGTTPVRVNEPDFWQPGVWAVMFDT 180 Query: 221 PASQLLAGARMDVYVIRDGEG 241 P +++ RM V+V GE Sbjct: 181 PTREIVPAGRMGVWVTLSGEA 201 >UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUD0_AERS4 Length = 242 Score = 232 bits (591), Expect = 9e-60, Method: Composition-based stats. Identities = 83/227 (36%), Positives = 117/227 (51%), Gaps = 5/227 (2%) Query: 14 FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQ 73 +V + GG + ISN +PNL VPGDR+ ++S G LT+ + Sbjct: 15 LLVLAVAPTTMAATAVTLTFSPGGHLDLPISNVNPNLIVVPGDRVTNISSAAGLLTDKKN 74 Query: 74 TASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWET 133 T +G + +T + KPFT +ET G SI A PR GR+ +L A WET Sbjct: 75 TQAGAALFSTASDKPFTLYVETRLGQVFSINATPRATEGRSYRLFPTTPTPRPVAKVWET 134 Query: 134 STPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAV 193 + PYES+LV +++A LP G+ + KE AGL + D+ W GN L +VR+ + Sbjct: 135 AQPYESMLVALNRA-----LPEGYGPASIDKEAPFTRAGLQATPDSAWDGNALHIVRYRL 189 Query: 194 ENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 N + +RE DFW PGTRA+M +L+AGA +YVIR E Sbjct: 190 TNPLSVPVVLREPDFWMPGTRAIMVHPRYQRLIAGASTWLYVIRTQE 236 >UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB08_ERWT9 Length = 248 Score = 221 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 8/241 (3%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAP--TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN 62 N + + + P + Q + A S SPN V G++I ++ Sbjct: 3 NKKYFLSPALLIAAAFQTHAAVVPGVKEISFGPNAQVNAAFSQVSPNRIIVQGEKITDIS 62 Query: 63 SLDGALTNNEQTASGGVV-VATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS-- 119 GA + +Q G ++ +A + FT + T++ LSI+ +P+ G+T+ V Sbjct: 63 GPGGAFDSQKQPDGGALISLAPGVSQSFTLFVVTDKNSALSIEIIPKSIPGKTLSFVPQT 122 Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSVAD 178 E +WE YE LV IS+++ G +P + + PV++ +PA G++ AD Sbjct: 123 APMKVKPEEKSWEEGQSYEKTLVDISKSIINGVIPQDFSEYPVSRVQAYSPAVGVTLRAD 182 Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + G H+++VR+ + N + ++ E F+ PG RAVM S L + YVI D Sbjct: 183 KHFIGPHMRIVRYIMNNPSYLNQDLTEKQFYAPGVRAVMLS--TRNLYSHGEGYAYVIFD 240 Query: 239 G 239 Sbjct: 241 D 241 >UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK n=2 Tax=Pantoea sp. At-9b RepID=C8QE99_9ENTR Length = 245 Score = 220 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 8/246 (3%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+K + + + +A+ P N +SNTSPN + G+ I A Sbjct: 1 MKKTVSVLTALAALTLVPAVASAVVPGPAGTVFENNAHLKAQMSNTSPNKIVIDGELITA 60 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 V +GA T + TA G +++ + + FT +ET G+++S+ P+ G+GRT++L+ Sbjct: 61 VTGPEGAYTKD-STADGALLITPLTGQDFTLFIETAGGVSVSLDVSPKPGSGRTLELIPA 119 Query: 121 --LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTK-ETLQAPAGLSSVA 177 +A AWE S P++ LV++++ V G +P G+ + ++ PAG+ Sbjct: 120 DVPLKPNPDAKAWEESQPFQKTLVSVARTVANGGVPDGYTDMKASRAPAYNPPAGVLLTP 179 Query: 178 DAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 + G+HL+++R+ ++N + E FWQ G RAVM S L A V+VI Sbjct: 180 ERQLAGSHLRVMRYRMKNTGYVTRTLSEKQFWQQGVRAVMLS--TRTLYANGEGYVWVIF 237 Query: 238 --DGEG 241 D EG Sbjct: 238 STDKEG 243 >UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK n=6 Tax=Shewanella baltica RepID=A6WUR6_SHEB8 Length = 272 Score = 205 bits (522), Expect = 9e-52, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 100/274 (36%), Gaps = 39/274 (14%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N + F SV+AAN P + I +S+ N V GD+I + Sbjct: 1 MKIANPLVFAACALFPMSVLAAN--TPPKHYGFNDSETVPIELSSVDINRLVVEGDKITS 58 Query: 61 VNSLDGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118 ++ +G T + SG V PFT + TE+G + + P+ T + Sbjct: 59 IDCPEGFCVVTGTKSDKSGAARVNLNLAMPFTAYVSTEKGRHFGLFISPKAIPAVT-SIF 117 Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKL---PAGWYQVPVTKETL-------- 167 + E+ ++ TPY +++ + + P Y+V V + L Sbjct: 118 TAEHYREEQPSVFDKKTPYPTMMTEFTAQMIRYLATGKPIDGYRVHVVNDDLERTTVDSE 177 Query: 168 ---------------------QAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206 PAGL++ V+TG H + + V N + + + Sbjct: 178 PRGTETSIDDAMFTRLNEQQMPKPAGLTTEPAFVFTGKHFNGIIYRVTNHAALPVTLTTA 237 Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 F+ P TRA S +L ++V+ GE Sbjct: 238 QFYSPTTRAAALS--TYELAPKQTGHLFVVSGGE 269 >UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK n=2 Tax=Legionella RepID=D1RMP1_LEGLO Length = 239 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 13/244 (5%) Query: 4 NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63 N + S F+ S+ A N + G + ++++S+ + N V G+RI+ V+ Sbjct: 2 NALQLFVLSSVFATSLHAGNTV---ATLKFEEGERFALSLSSLNFNRIDVEGERIVKVSF 58 Query: 64 LDGAL-----TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118 + + +E G VV+ + P T T + S P E G+TI+LV Sbjct: 59 PEHSFIIEQSKESEDDLDGAVVLKPLAHIPLTVYFTTNLNHHFSATVSPTEDLGKTIKLV 118 Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD 178 S + A A E S +S L+T A+ G P+G+ +V + T + L Sbjct: 119 SKKLKGFDYAKAQEQSQYQQSDLMT---ALMEGTTPSGFQEVGIKPTTFRLHKHLKVTLV 175 Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 G + +EN++ + + S F P + S+ L Y I Sbjct: 176 KQVRGKESSGYVYRIENQSNKPMELTASLFEHPKLMTMELSEKM--LQPSQTAYFYGIYR 233 Query: 239 GEGN 242 + N Sbjct: 234 EQSN 237 >UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrionales RepID=B6ESX6_ALISL Length = 251 Score = 195 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 14/252 (5%) Query: 1 MRKNN--TAIIFGSLFFS-CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDR 57 M+KN ++ ++ S S L P + I +S+ + N V D+ Sbjct: 1 MKKNPSQPLVMIAAVLLSFLSFEGRAKNLPSNTYPFNDNDTVPIVLSSLNINRLVVRDDK 60 Query: 58 IIAVNSLDGALTNN--EQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTI 115 II ++ G T+ +Q ASG + + PFT + T+ G N ++ PR Sbjct: 61 IIGLDCPTGFCTSKGNKQDASGSITLRLNIALPFTAQVTTKNGRNFTLFITPRAIPALVS 120 Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVR----GGKLPAGWYQVPVTKETLQAPA 171 + + T +E + Y + L ++++ G L G+ V TL Sbjct: 121 EFIGT-ANTRQEKSVFTRDFDYPTALTQFTKSMMLWSERGFLIDGFSLHHVDPSTLPKDT 179 Query: 172 G-LSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230 L+ + V+ G + + V N++ + + S F+ TR+ ++ LL Sbjct: 180 NPLAIIPQTVFVGKEYSGIIYRVLNQSSGQVTLSTSQFYSYSTRSAAITK--DTLLPNED 237 Query: 231 MDVYVIRDGEGN 242 M +Y++ G GN Sbjct: 238 MTLYIVTGG-GN 248 >UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenophonus nasoniae RepID=D2U002_9ENTR Length = 227 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 11/228 (4%) Query: 13 LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE 72 + S S+ A N T+ P V +++SN PN+ V DRI+ NS G L + + Sbjct: 1 MLISTSIWAENLTVTPHSV-------VRLSVSNREPNVIAVMNDRIVEANSAAGKLADKK 53 Query: 73 QTASGGVVVATVNKKPFTFILETERGLNLSIQAVP-REGAGRTIQLVSDLRGTGEEAGAW 131 T SG ++ T PF+ +ETE+G ++ A+P ++ G + +++ A W Sbjct: 54 ATDSGALIFTTEETTPFSLYIETEKGFGFTVNAIPVKKSQGINVSVMNAEAKADSSAQEW 113 Query: 132 -ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAP--AGLSSVADAVWTGNHLKM 188 +TS Y + A +P G+ + A A + G ++++ Sbjct: 114 GKTSDSYSQFITRTFTAAMNDNIPTGFVKNGRVNVNWSASALANFRFRDSVSFQGKNIRL 173 Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 +R VENKT + + E FW T A+ F+ + L ++ ++++ Sbjct: 174 LRVNVENKTSQPIQLNERVFWVLQTMAIAFNPTVNTLRPHEQVTLFLL 221 >UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly protein TraK n=2 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T4_LISDA Length = 243 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 22/251 (8%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M K + +L F+ +V+A AP V + S+ +S+ N V D+I + Sbjct: 1 MSKYPAVLGLCALIFAPTVLAT----APNTVLFSDNETVSVNLSSLDINRLVVKDDKITS 56 Query: 61 VNSLDGALT-----------NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109 V G T G +++ +PFT + TE+G + + P Sbjct: 57 VTCPTGFCTMPANPVDESGTGAPVDPQGAGLISLNVLEPFTLYITTEKGRSFGVFVRPLA 116 Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGW--YQVPVTKETL 167 T +S R T ++A +E +PY L + + +P G+ ++ V K Sbjct: 117 VPAITTVFLSTERDT-QKAQEFEKQSPYTQTLAALISHMIKETIPEGFAFQRLTVKKPIE 175 Query: 168 QAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLA 227 QA L A + G HL + + NKT + + + F++ G +AV FS + + Sbjct: 176 QAK--LLLTPIASYQGEHLTGISVKISNKTAQYIQVEPTSFYKAGVKAVSFS--SMSIPP 231 Query: 228 GARMDVYVIRD 238 + +Y I+ Sbjct: 232 HGSIYMYQIQG 242 >UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9_9GAMM Length = 239 Score = 173 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 25/249 (10%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 MRK + + S M AN +P+ ++ +S + N V D+II Sbjct: 1 MRKPLSVAL---ALISTMTMGAN------SIPVKENSDIALTLSQNNYNRIVVKNDKIIE 51 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 ++ G V V PFT + TE+G + S+ E G+TI+LVS Sbjct: 52 AVFPPNSMAIKRDEQDGSVYVMLSATNPFTLFVTTEKGTHFSVTLNGEESLGKTIELVSP 111 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKL--------PAGWYQVPVTKETLQA--- 169 + + A + +T +++ +AV L + V + ++ +A Sbjct: 112 PQ---PKVVASQANTTKDNMKTITQEAVPEAILALLTHMEQHKPFADVRIKRQFGKAQRW 168 Query: 170 PAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGA 229 GL+ + W G LK + N+ L + + F + GT A+ FS+P+ + G Sbjct: 169 SKGLTLLPKESWDGKLLKGETIELYNRGKEPLELSQEWFAKVGTLAIKFSKPS--IAPGE 226 Query: 230 RMDVYVIRD 238 + +Y ++ Sbjct: 227 KAMLYRVQG 235 >UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=B3DCS7_BURM1 Length = 319 Score = 163 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 13/236 (5%) Query: 7 AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66 ++ G L + V N G ++ +S PN +P V++ D Sbjct: 84 IVLPGVLTVPGEGIGVPDPSNVQKVSWTNTGNKTVYLSADEPNRILLPFKNAYIVHTSDV 143 Query: 67 ALTNNEQTASGGVVVATVNK---KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRG 123 + EQ S V V N +I + G L + VP++ +TI + D Sbjct: 144 QVDKREQ--SNNVYVYWTNAPSQARHLYIEPPDGGSALGLAIVPKKIPAQTILVTDD--- 198 Query: 124 TGEEAGAWETSTP---YESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 TG +G S+P Y S + + A+ GK P G+ QV + + A GLS+ D Sbjct: 199 TGIVSGRRPKSSPGSEYTSHIQDLMAAIALGKAPDGFSQVDIQLPPI-AMNGLSATVDTR 257 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 ++ + + V N T S +RE +F P AV P LL G + V V+ Sbjct: 258 YSSQEGDLYVYTVRNPTQSRAVLREEEFDGPEVIAVSI-YPKPVLLPGEKTRVIVM 312 >UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LW92_PHOPR Length = 244 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 15/243 (6%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64 II G S A T + + +S+ N V D+I ++ Sbjct: 7 FAIIIAGC----VSATAHAKNTPGTTYTFNDNDTVPVILSSVDINRLVVKNDKITGIDCP 62 Query: 65 DGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122 G + + SG + F + T++G + P+ G T + + ++ Sbjct: 63 AGFCVVSGTKTDTSGSARLKLNISVAFVAYVSTQKGRQFGMFITPQAIPGITSEFIG-VQ 121 Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRG----GKLPAGWYQVPVTKETL--QAPAGLSSV 176 T +E PY + L + + G++ G+ PV +T+ A L+ + Sbjct: 122 NTQHTPSVFEKKAPYTTQLAEFTAQMIRWTNTGEMMGGFSLHPVDPKTVTNTLTARLAVI 181 Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 D ++ GN +R+ ++N T + + + F+ R+ S QL +Y++ Sbjct: 182 PDTIFVGNTFSGIRYKLKNNTTTTQTLTTAQFYSRAARSAALS--TDQLAPNDTAWLYIV 239 Query: 237 RDG 239 G Sbjct: 240 TGG 242 >UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS1_LEGPH Length = 237 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 17/238 (7%) Query: 12 SLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNN 71 ++ FS ++ A A + N I S PN + DRI + + L + Sbjct: 5 AMIFSLGLLIATAEGAQIK-TVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTLVDA 63 Query: 72 EQ---------TASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119 +G + + + FT L TE+GL +++ P+ A +TI S Sbjct: 64 CNGKANCKLIDDTTGILTFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIVFKS 123 Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179 R A A ++ YE ++V +A+ G LP G+ Q ++ Sbjct: 124 -YRNPVIRARA-PHTSSYEKVMVGFLRALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRLL 181 Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 GN ++ F ++N T ++ +ES F PGT+ V ++ L +Y I Sbjct: 182 TVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKT--HLAPFETTRLYRIS 237 >UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Y8_ACIBC Length = 240 Score = 100 bits (249), Expect = 4e-20, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 76/237 (32%), Gaps = 16/237 (6%) Query: 12 SLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG-ALTN 70 F S+ T A + + + +SNT PN+ V G RI+ + D AL Sbjct: 8 IALFISSIFLTTSTFAAQHITKADQETVQVTVSNTEPNVLVVDGRRIVNLVPSDVTALDT 67 Query: 71 NEQTASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEE 127 G + P T + + G + PR + LV G Sbjct: 68 LPDKEQGTLYFKISPYFQNTPITLFVTDDEGTRYKLVLQPRSVGAEEVVLVPPKPG---- 123 Query: 128 AGAWETSTPYESLLVTISQAV------RGGKLPAGWYQVPVTKETLQAPAGLSSVADAVW 181 AG + S Y + + + L K + V + Sbjct: 124 AGTSKRSQSYLQQIKELMYVMGDDAENPQETLAVDGISRSFVKAEIPLWKESKFVLLRRY 183 Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + + + + N T +N+ E +F++ G AV L G VYV+R+ Sbjct: 184 DTDGMYGEMYQLTNLTNKTMNLLEQEFYRKGVSAVSIQN--LTLSPGRSTFVYVVRE 238 >UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly protein TraK n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU7_9VIBR Length = 238 Score = 96.8 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 88/236 (37%), Gaps = 10/236 (4%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64 AI F L S + A+ V+G ++ ++ S N V D+I+ + Sbjct: 3 PHAISFVLLSMSLNTALASSASPAQPHLFVSGDTVTLELNQRSLNRLYVDNDKILNLTCP 62 Query: 65 DGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122 N +G +++ PFT L TE+G L+++ P + R + + Sbjct: 63 THQCEVVQNPSDQAGSILLGLSEPHPFTAHLFTEQGRLLALEVQPSDTTTRVHRFI---- 118 Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVW 181 G+ + +T + + G + VT ++ A G L AV Sbjct: 119 -PGDASHPQTLNTRILGFVKDLMHWSSGEEPSVSMTIARVTHASVMAHRGDLELTPVAVA 177 Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 L + + V N + +I DF+ P A + ++L AG R +Y+I Sbjct: 178 RQGPLSGIIYEVLNTSEGPTSISNRDFYSPSALAASLDR--NELPAGERTRLYLIT 231 >UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WDF8_ACISJ Length = 245 Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 11/240 (4%) Query: 10 FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV-NSLDGAL 68 ++ S++A A VV + G + IS N + G RI V S+ G L Sbjct: 9 LSAILLLTSLLATEAG-ATQVVENADRGHVQVNISVNETNRLAIDGRRIANVVPSVKGVL 67 Query: 69 TNNEQTASGGVVVATVNKKP----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT 124 + A G ++ P T + E+G+ + VPR AG I + Sbjct: 68 AGQKDEALGAYYFTLASESPNQGTVTVFVSDEKGVTYKLILVPRPVAGEEIIIRPPSEKA 127 Query: 125 GEEAGAWE--TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWT 182 + A + Y+ + + + +L + V KE G + Sbjct: 128 TPSSRAAADGRTVSYQRRIKDLMLVMADDELKDSVETIQVNKEVPLWKEGRLILVAKYMD 187 Query: 183 GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242 G + ++ + N + S + + E + ++ G RA+ L+ G D+Y++R+ + N Sbjct: 188 G-EVVGEKYRLTNVSPSEMLLVEQELYRRGVRAIAVEH--HTLMQGDGTDIYIVRERKDN 244 >UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enterobacteriaceae RepID=Q2VP23_ECOLX Length = 198 Score = 90.6 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N A++ G+ S + +P + GQ ++ISNT PN+ +PGD++ A Sbjct: 1 MKNNFPALLLGTALMITSPVTVYAQ-SPATLSFPQRGQFRLSISNTDPNMIFIPGDKVTA 59 Query: 61 VNSLDGALTNNEQTASGGVVVATVN 85 + + +G L + T++GGV+ +V Sbjct: 60 ITAQNGMLADKRLTSAGGVLFTSVA 84 >UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY8_ACIJO Length = 243 Score = 86.0 bits (211), Expect = 9e-16, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 82/240 (34%), Gaps = 15/240 (6%) Query: 10 FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV-NSLDGAL 68 + + S++ + A V ++ +S+T N V +I +V S+ AL Sbjct: 7 LALIPLTVSLLFSPFAQAVQHVDKAYLDNVTVNVSSTEQNALVVQDRKITSVIPSIADAL 66 Query: 69 TNNEQTASGGVVVA---TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTG 125 + G + + + + ++G + P G +L+ Sbjct: 67 EYEKDVTQGVLYFKVAPWYANRTISAFVNDDQGTRYKLVMRPTASLGAE-ELILIPPKVK 125 Query: 126 EEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPV-------TKETLQAPAGLSSVAD 178 E + + S Y + + V G ++ + + + Sbjct: 126 EGSSTDKGSQSYLQQIKELIY-VMGDDADDPQDELAIEGISRSFVNQQIPLWKEARMTFA 184 Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + + G+ L + V N T S L + E +F++ AV LL G +VYV+R+ Sbjct: 185 SRYDGDGLYGEHYKVTNITNSNLILLEQEFYRKKVVAVSIEH--LNLLPGQTTNVYVVRE 242 >UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J828_ACIF2 Length = 390 Score = 83.7 bits (205), Expect = 5e-15, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 86/214 (40%), Gaps = 15/214 (7%) Query: 31 VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTA----SGGVVVATVNK 86 + + +G SI +S +PNL P + +TN++ +VV+T Sbjct: 172 IRVHSGKTYSIIVSGVAPNLIETPFRH------PEMLVTNSKLATPIVHGQNLVVSTTPA 225 Query: 87 KPFTFILETERGLN--LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTI 144 P + + + +S+ +P++ + +L+ + Y +V + Sbjct: 226 FPVGVYVTGKNPHDPMISLTMIPKKIPPKNYRLIIPGFIPSVAPTVTGQRSGYAQRMVHL 285 Query: 145 SQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVWTGNHLKMVRFAVENKTLSALNI 203 + ++P + Q + L P G S + W GN ++ ++++N + +N+ Sbjct: 286 MRDAALKQVPENYRQSH-KRLALPGPGGAFSWTWEFSWVGNRYRITAYSLKNTLVGPVNL 344 Query: 204 RESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 E++F+ PG + P L G + V+VI Sbjct: 345 METNFYAPGVLSASV-YPHHHLYPGEKTQVFVIT 377 >UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderiales RepID=A2SNK2_METPP Length = 305 Score = 82.9 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 83/220 (37%), Gaps = 15/220 (6%) Query: 28 PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVN-K 86 V+ + + +S++ N + P D +++ D QT + + + + Sbjct: 88 ANVIRVQSDRNEIAYVSSSMANRISTPFDAPRVIDTQDVEY----QTVGQSIYLLPKDPE 143 Query: 87 KPFTFILE--TERGLNLSIQAVPREGAGRTIQLVSDLR-----GTGEEAGAWETSTPYES 139 KP + +S+ VP+ +TI L D TG ++ + Y Sbjct: 144 KPVALYITGSNANDPVVSLTLVPKPIPQQTIVLQIDAPLAKGGVTGVDSEPAPVTDVYSE 203 Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199 L + + V K+P G+ + + P G+S ++G + R+ + Sbjct: 204 RLRYLLRQVALNKVPEGFAEGTLPNAAAVLP-GVSIHPMTRYSGPAYDIYRYRIRGTGDQ 262 Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239 + + E F+ G RAV F P + + G ++V+ D Sbjct: 263 -VELAEDAFYTEGVRAVAF-FPTAVIRKGEETTIFVVADK 300 >UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX51_AZOSE Length = 294 Score = 79.4 bits (194), Expect = 9e-14, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 4/227 (1%) Query: 15 FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74 F S+ L + + G + +S N P AV + + Sbjct: 62 FGSSLSGDVNALKAQTIRVTPGQNEVVNVSMVQANRVGTPFAAPKAVGIIPEGMIVEAVG 121 Query: 75 ASGGVVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132 S + + + + P + + R +S+ VP+ +T L D+ G + Sbjct: 122 QSLYIQMPSTSTDPQSLFVTGSRPNDPVISLILVPQAIPSQTAILQFDVPEPGLQPDQNN 181 Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192 Y+ L+ + + ++P G + + + + L + ++ + R+ Sbjct: 182 EPDNYQQRLIQMMRQAAVNQVPVGMSEAALPRAVGRRGPLL-IRPEMRYSSATMDQWRYR 240 Query: 193 VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239 VE+ + + + E+ FW+ G RAV L G VYVI D Sbjct: 241 VESISDEEIELDEAAFWERGVRAVAILPSTR-LRKGDHAYVYVISDK 286 >UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax=Sphingomonadaceae RepID=Q0KJJ0_9SPHN Length = 274 Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 84/238 (35%), Gaps = 13/238 (5%) Query: 10 FGSLFFSCSVMA-ANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN-----S 63 G+ + + A LA V + G S ++ GD+ +V+ + Sbjct: 32 IGAALIALGALGLATPALADQNVMAADNGTVPCVASAKDLTRISLAGDQFASVSKITTGN 91 Query: 64 LDGALTNNEQTASGGVVVATVNKKPFT---FILETERGLNLSIQAVPREGAGRTIQLVSD 120 + G + ++ + P T F T +G R + +++ Sbjct: 92 PAEDFKIVNEPVRGDIYISVPDGFPRTSLSFFGTTRKGFVYKFVCQVRGTEAEQV-FIAN 150 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 T + A WE + E V ++QA+ G+ G+ E + L Sbjct: 151 AAITSDRARDWEVQSSPEDAAVRLAQAMYRGEAIDGFDMRSTVLEPVMV-GRLQVQQVGE 209 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + G +K + V N A ++ E+ G A+ F P S+L AG VY+I+ Sbjct: 210 YRGAEMKGLVLRVRNTGRQAQSLDENMLAARG--ALAFMAPTSELAAGQEAAVYLIQS 265 >UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepID=C4NUW8_ECOLX Length = 458 Score = 77.9 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 23/219 (10%) Query: 43 ISNTSPNLFTVPGDRI--IAVNSLDGALTNNEQTAS-----GGVVVATVNKKPFTFILET 95 +S + P++ + I +VN T+N Q V VAT + P T + T Sbjct: 225 LSKSGPSIMEAMLEAISGTSVNQPVTGATDNGQCGEVCIKENVVYVATDKQYPVTMFI-T 283 Query: 96 ERGL---NLSIQAVPREGAGRTIQLVSDLRGT------GEEAGAWETSTPYESLLVTISQ 146 E+G LS+ VPR R + L D +A WE S PY + ++ + Sbjct: 284 EKGSEAQALSLTMVPRRIPPREVFLKLDGGVGITGAFANTKAETWEQSQPYVETIRSVFR 343 Query: 147 AVRGGKLPAGWYQVPV---TKETLQAPAGLSS-VADAVW-TGNHLKMVRFAVENKTLSAL 201 + G++P G+ + A G+ + + G+HL + N + + Sbjct: 344 KIALGEVPQGYTLNRIPAGAAVPSCAHPGVKVDFSKGQYMMGHHLNVFIGVALNVSDQPI 403 Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 +E+ AV + P + L G + ++YV + + Sbjct: 404 EFKEALCGSWDVAAVT-TWPLNVLEPGQKTEIYVAKKQK 441 >UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G6C6_NOVAD Length = 252 Score = 77.1 bits (188), Expect = 5e-13, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 77/218 (35%), Gaps = 14/218 (6%) Query: 35 NGGQASIAISNTSPNLFTVPGDRIIAVN-----SLDGALTNNEQTASGGVVVA---TVNK 86 +G +S F + D+ +V+ + + G + V+ T Sbjct: 38 DGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTNEPVRGDIYVSVPETYAA 97 Query: 87 KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQ 146 + +F T++G + + T +++ A WE+ TP E+ V + Q Sbjct: 98 RSISFFTTTKKGFVYKVACRVEQIPA-TQVFITNPAIAKNRAADWESQTPIETSAVRLIQ 156 Query: 147 AVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206 A+ + G+ +V + L A + G L + N+ ++ + E Sbjct: 157 AMANDRTVDGF-EVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAER 215 Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVI--RDGEGN 242 D T AV ++P L GA +V+ GN Sbjct: 216 DLAPRDTLAVSIAEPK--LEPGASTTAFVVGASGETGN 251 >UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylobacterales RepID=A7H3G5_CAMJD Length = 270 Score = 76.7 bits (187), Expect = 6e-13, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 100/266 (37%), Gaps = 42/266 (15%) Query: 8 IIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGA 67 +I +L S S+ A N P+ +I +SN+S N +P +I+ V Sbjct: 4 VILSALTLSTSLFAINVIDNPSS------DIININVSNSSVNRIVLP-TQILDVAYSKEK 56 Query: 68 LTNNEQTASGGV--------------------------VVATVNKKPFTFILETERGLNL 101 + + + + +V K F + R + Sbjct: 57 GIDIKISGNQAFIKFLPIQKERVRSVGKDRYEPVGEPEIVYDKAKGSEVFFVTANRTYSF 116 Query: 102 SIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVP 161 ++ P+ T+ +++D +E +E+ PY S + I++++ G +P G+ +V Sbjct: 117 ALN--PKNMDAETV-IINDFSAQKDEILKYESDDPYMSTMGKITESILKGGVPQGY-KVK 172 Query: 162 VTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF-----WQPGTRAV 216 + + + L + + G K V+NKT A+ + D+ P ++ Sbjct: 173 KINKVISSDKTLITRELTNYDGLLYKATLLEVKNKTDKAIRLNPKDYISIAKEAPKAISI 232 Query: 217 MFSQPASQLLAGARMDVYVIRDGEGN 242 ++ + LL ++ + +I G N Sbjct: 233 YYNNEVNHLLPYSKAQIIIITKGGRN 258 >UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly protein TraK n=17 Tax=Gammaproteobacteria RepID=C3NU46_VIBCJ Length = 300 Score = 76.7 bits (187), Expect = 6e-13, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 83/229 (36%), Gaps = 22/229 (9%) Query: 24 GTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTA--SGGVVV 81 T PT + M G I ++ N P + S T++ QT V V Sbjct: 58 STDVPTTLLMTPGVNELIPVALGHLNRIVTPFE------SPQVRTTSDAQTQIKGNVVYV 111 Query: 82 ATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLR------GTGEEAGAWET 133 AT + P + + LS+ VPR R I L D + +A WET Sbjct: 112 ATDKESPVSLYITPPGQEAPALSVTLVPRRIPPREITLAIDGQQWPIKGVVNRKAATWET 171 Query: 134 STPYESLLVTISQAVRGGKLPAGW-----YQVPVTKETLQAPAGLSSVADAVWTGNHLKM 188 + PY L + + + +LP G+ Q + + Q + TG++ + Sbjct: 172 AQPYVDSLRDLLRHLALNELPQGYDIRLAGQTDTSPKCFQPGLKFGFKQGQIVTGHYFTV 231 Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 VE+ + E P A + P + LL G + ++YV+ Sbjct: 232 YVGLVESFADEPIEASEIACHAPDIVASAY-WPRNILLPGEKTELYVVV 279 >UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F359_9PROT Length = 236 Score = 73.7 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 77/232 (33%), Gaps = 15/232 (6%) Query: 19 VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL-DGALTNNEQTASG 77 A A ++ + IS+ PN + G I G + G Sbjct: 4 TAAPTSAFAIQILDAADSDSLVARISDHDPNRIRIAGGFITMAVGPRSGRIAIETDDKRG 63 Query: 78 GVVVATVNKKP-----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132 + V P FT L G + ++ P +G++ LV R + Sbjct: 64 QIFVRVNENVPDKHKAFTLFLTDAEGRDYTLLLKPARISGQS--LVIRPRRQRPQVSNPA 121 Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192 E+ + + +A+ G +P ++ T + + G + + V + R+ Sbjct: 122 GVEKREARIKRLVRAMALGDVPR-HCEISETDKRVPLWKGTNFHLNRVMRCGDFNVERYR 180 Query: 193 VENKTLSALNIRESDFWQPGTRAVMF------SQPASQLLAGARMDVYVIRD 238 + N + + E + + G AV ++ A + G V ++R+ Sbjct: 181 LANSGDKVIRMAEQELYSNGVAAVSVERMHLNAEGAVSIPPGNATMVIIVRE 232 >UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI3_BURCJ Length = 248 Score = 70.6 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 79/248 (31%), Gaps = 15/248 (6%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M N I + F +AA L +S T N + G I Sbjct: 1 MFSNLRKWIAAATLF---PIAAANVLPANAATAGASEPREYTVSATEQNRLEIAGRAIKK 57 Query: 61 VNSL-DGALTNNEQTASGGVVVATVNKK----PFTFILETERGLNLSIQAVPREGAGRTI 115 V GALT + +G A N T + ++G + PR I Sbjct: 58 VVPSHKGALTYVKDKGNGVFYFAFANGGDGMGTETLYVIDDQGATYQLLLQPRRVPSANI 117 Query: 116 QL--VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKL---PAGWYQVPVTKETLQAP 170 + D G A TS+ Y+S + + + ++ + + Sbjct: 118 IVPAAGDAPGRSAAARTAATSSAYQSAIKDLVYEMAAAQVDPSADPAASAVPVHQDVPLW 177 Query: 171 AGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230 D + + ++ + N + S + I E + ++PG V Q L G Sbjct: 178 KEARLTFDTKYVDDTFVGEQYTLTNVSSSDMVIAEQELYRPGVVVVAVEQ--QTLAPGDS 235 Query: 231 MDVYVIRD 238 VY++R+ Sbjct: 236 TRVYIVRE 243 >UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas RepID=B7XGQ6_PSEPU Length = 346 Score = 69.8 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 30/242 (12%) Query: 19 VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGD--RIIAVNSLDGALTNNEQTAS 76 + A + V + +G I IS N P D ++ V++ D +++ N Sbjct: 95 PVPAQPIESRQDVVVSSGTNTLIPISRGQMNRIVTPFDVPKVQTVSTADISVSGN----- 149 Query: 77 GGVVVATVNKKPFTFILETE--RGLNLSIQAVPREGA--------GRTIQ-LVSDLRGTG 125 + V T KP T + + + +S+ +P+ + +Q L S L T Sbjct: 150 -VLYVTTFEDKPVTMYVTPDDDETVAISLTLLPQGVPPIQANLILAKNVQGLASGLPVTS 208 Query: 126 E-----EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 +A WE S PY L ++ + + GKLP G+ + PA Sbjct: 209 STNYSGQARKWERSQPYMDTLRSLMREMALGKLPRGYS-FGALTNGNKIPACAQPSLSFD 267 Query: 181 WTGNHL-KMVRFAVENKTLSALNIRESDFWQPGT----RAVMFSQPASQLLAGARMDVYV 235 ++ + L + F V T ++ R +F RA + + P L G + +V+V Sbjct: 268 FSKSQLIEGHDFKVFVATAENVSARTVEFDHASCTHPHRAAVSAWPDEVLEPGQKTEVFV 327 Query: 236 IR 237 I Sbjct: 328 IT 329 >UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDC9 Length = 206 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 11/202 (5%) Query: 46 TSPNLFTVPGDRIIAVNSLD-GALTNNEQTASGGVVVATV----NKKPFTFILETERGLN 100 T N + G +I + GALT + A+G + + + + + Sbjct: 2 TEQNRLAIDGRKITQIIPKQKGALTYVKDLANGVLYFTFADPDAAQGTESLFVVDDHNDT 61 Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGA-WETSTPYESLLVTISQAVRGGKLPAGWY- 158 + PR I + + G A ++ Y+ + ++ + + Sbjct: 62 YQLLLQPRRMPSANIVVPAVGGGEVRRTQAISTRTSSYQFAIKSLLEEMVAAHDDQDAQF 121 Query: 159 --QVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAV 216 V + + + +T + L ++ + N + + I E + ++ G A+ Sbjct: 122 SAAVTPVNQMVPLWQEAQLTLELRYTEDDLVGEQYRLTNVSTGDMVIAEQELYRKGVLAI 181 Query: 217 MFSQPASQLLAGARMDVYVIRD 238 + Q L G VYV+R Sbjct: 182 VIDQ--QTLAPGDSTAVYVVRG 201 >UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2 Length = 185 Score = 68.3 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 11/183 (6%) Query: 64 LDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRG 123 ++G L + T +G + V ++ P + +E G + P G I + Sbjct: 1 MEGDLELQKDTTTGQLFVRSLTSNPTNLFVISEEGKTYLLVLKPTSKQGDNIVIDVAGAN 60 Query: 124 TGEEAGAWET---------STPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLS 174 E A ST Y + + ++ G +T+ Sbjct: 61 RREAAVLASQTGPMPVTMNSTEYVRAIKKMMASMMRGTTGDMGINHSHEYQTVPLWKNTL 120 Query: 175 SVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVY 234 + + +T ++ + F + N L IRE +F++ G AV L G DV+ Sbjct: 121 FIQNGSYTAADMQGLSFTLTNLGTKQLEIREQEFYRQGVLAVAV--RKQILQPGEITDVF 178 Query: 235 VIR 237 +I Sbjct: 179 IIS 181 >UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythrobacter RepID=Q2N5I0_ERYLH Length = 271 Score = 64.8 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 72/247 (29%), Gaps = 10/247 (4%) Query: 2 RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61 R+ + + L +A A V + ++ + D V Sbjct: 26 RRPDPGLKLSGLAVIAFALAPVPAHADQFVEAADNATIDCELARGELTRIALIDDGFANV 85 Query: 62 NSL-------DGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRT 114 + + D +T+ + V T + + A G T Sbjct: 86 SKIASGFPYNDFQVTHEPVRGDIYISVPPQFAAARVSFFATSKAGYVYKFACRLGGQEAT 145 Query: 115 IQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLS 174 +++ EA WE T E + + +A+ + G+ + G+ Sbjct: 146 QLFITNPALAKSEAAEWEAETGPEDAAIRLIEAMATDAVLPGFT-ARAELSAPRRSGGIE 204 Query: 175 SVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVY 234 A + G+ L RF V N +L + G A+ F+ L G + Sbjct: 205 VQLVAEYQGDELTGQRFLVRNLGQESLALGSEREGPAG--ALAFAYGRDALAPGEATSAF 262 Query: 235 VIRDGEG 241 ++ G Sbjct: 263 LVFARGG 269 >UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN25_9PROT Length = 243 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 16/222 (7%) Query: 31 VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGA----LTNNEQTASGGVVVATVNK 86 V +GG + +S + D +V +G + + A+G + + Sbjct: 25 VEASDGGVVTGYVSASGITRLRFTSDAAASVQMAEGGEGAGFSIQHEPATGDLYLTLGRL 84 Query: 87 KP-------FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYES 139 +F + T G ++ + I++ + + A T + Sbjct: 85 PRQGEAVGAASFFVTTRAGYTYQVELAAKATPSTQIEVRNPDLARRQTERALAE-TSLDE 143 Query: 140 LLVTISQAVRGGKLPAGW-YQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTL 198 +V +++A+ L G+ + PV +E +A L A + + L+ N + Sbjct: 144 EVVALTRAMWASALLDGYEIKRPVVRE--RAAGTLRLAVRATYESDALQGRVLIARNPSR 201 Query: 199 SALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 + I ES F PG AV P L GA + V ++ G+ Sbjct: 202 GDVAIEESLFLAPGVAAVTIQGP-RVLGPGASVPVLIVDRGQ 242 >UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=Enterobacteriaceae RepID=Q8KJZ3_PROVU Length = 388 Score = 62.5 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 79/242 (32%), Gaps = 36/242 (14%) Query: 31 VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASG-GVVVATVNKKPF 89 + + G I IS N P +R L + + G V V T N +P Sbjct: 136 IIVEPGVNTLIPISMGQINRIVTPFERPTI---QRLQLDDVKVNVEGNAVYVYTPNSRPV 192 Query: 90 TFILETERGLNLSIQA--VPREG-AGRTIQLVSDLR----------------GTGEEAGA 130 + + ++SI VP+ + ++S G+ +A Sbjct: 193 ALYISEKGDESVSISVSLVPQRIAPVQATLMLSRKLNNAAVAGGGVSPIMYGGSEAKAKK 252 Query: 131 WETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWT-------- 182 WE Y + I + V G +P G+ +T ++ + Sbjct: 253 WEQKDSYVETVRNILRTVALGDIPPGYALGNLTSSVSIPNCNFNTGTVQDYIRYNFNGGQ 312 Query: 183 ---GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVY-VIRD 238 G+ ++ +N + + + ES P A + L G + + Y V+R+ Sbjct: 313 YINGSQFSVIVGIAQNTGPTTVTVDESLCTHPQMAARAL-WSRNTLAPGQKTEAYFVLRN 371 Query: 239 GE 240 G+ Sbjct: 372 GQ 373 >UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK n=1 Tax=Arsenophonus nasoniae RepID=D2U0R3_9ENTR Length = 340 Score = 60.6 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 82/266 (30%), Gaps = 45/266 (16%) Query: 15 FSCSVMAANGTL---APTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNN 71 SVM N + V + +G I IS PN P + + ++ + Sbjct: 62 VPSSVMRNNNQQRLDSRMTVTIHSGENRLIPISVGQPNRIVTPFPEPVVLVIKKNSVKIS 121 Query: 72 EQTASGGVVVATVNKKPFTFILETERG---LNLSIQAVPREGAGRTIQLV---------- 118 ++ + + + K+P + T +G +S+ P + L+ Sbjct: 122 KE--GNVIYITSYKKEPIAMYI-TNKGDESKAISLSLHPEQRPPVEATLLLAKEINTTNS 178 Query: 119 ------------SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET 166 + E+A WE S Y + + +A+ G LP G+ + Sbjct: 179 NYNNSMYYSPTNASQSANREKAERWEKSDTYAKTITKLLKAIALGDLPTGYEITDLKDTN 238 Query: 167 LQAPAGLSSVADAV------------WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTR 214 + P L G ++ N LS + + ES P Sbjct: 239 VSIPNCLFRTGGDQDNIKYSFKNGQYIAGARFSVIVGVASNTGLSTVLVDESLCTHPRLA 298 Query: 215 AVMFSQPASQLLAGARMDVY-VIRDG 239 A + L + + Y VIR+ Sbjct: 299 ARAL-WSNNTLAPNQKTEAYFVIRND 323 >UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ANL8_BURGB Length = 246 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 18/242 (7%) Query: 2 RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61 R + + F +A +V + + +S NL T+ G R I Sbjct: 13 RLMLPLVAPLAALFVAGPASAIS-----IVKGADRQAQQVFVSAAEYNLLTMSGGRQITK 67 Query: 62 NSLDGALTNNEQTASGGVVVATVN----KKPFTFILETERGLNLSIQAVPREGAGRTIQL 117 + A N + T + + G++ + VP +++ Sbjct: 68 VVPTVPGSLAWTQAGNQFWFKPSNPTALNETITIFVFDDAGVSYRLSLVPGPRPAEDVRI 127 Query: 118 VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGK-LPAGWYQVPVTKETLQAPAGLSSV 176 + G ++ ++ + + A+ G + +P + + + Sbjct: 128 ----QPPASSTGRALRASAFQRHVKLLILAMSGAQSVPQ--VAYTSVETAVPLWKEATLT 181 Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 ++ L + + N + + L++ E + + PG AV L AGA VYV+ Sbjct: 182 RVREYSDGDLVGETYTLANTSHNDLSLDERELYAPGVLAVAIEDA--NLPAGASTIVYVV 239 Query: 237 RD 238 R+ Sbjct: 240 RE 241 >UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N903_9SPHN Length = 277 Score = 54.8 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 80/230 (34%), Gaps = 20/230 (8%) Query: 20 MAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE-----QT 74 M A+ LA + + + G S+ ++ D+ V+ + A N + + Sbjct: 50 MTASPALADQNLLVSDNGTVECVASSKDLTRISLKADKFANVSKVAAASENEDFSVVFEP 109 Query: 75 ASGGVVVATVNKKP---FTFILETERGLN--LSIQAVPREGAGRTIQLVSDLR--GTGEE 127 G + ++ P +F T +G S + + V + + + Sbjct: 110 LRGDIYLSVPEGYPRKALSFFGTTVKGYVYKFSCNVQSQGAEQIFVANVDMEKAGQSEQV 169 Query: 128 AGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLK 187 AG + + + QA+ G+ + +Q L + + G L+ Sbjct: 170 AGLSDKDRS-----IELIQAMYRQDALPGFEIRSQDRAPVQV-GSLKVQLVSEYVGLELR 223 Query: 188 MVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 + +EN + A+++ + AV + +++L G + +++ Sbjct: 224 GKQLLIENVSRKAVDVTDDTVASEDALAVSVT--SARLEPGQKTTAFIVS 271 >UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betaproteobacteria RepID=A1W657_ACISJ Length = 335 Score = 54.4 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 77/233 (33%), Gaps = 26/233 (11%) Query: 17 CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTAS 76 C A + AP G + +I+++S N G + Sbjct: 116 CGGGAPAISAAPNTPSSTPGLASPASITSSSVN--------------PAGDVIVECDRDK 161 Query: 77 GGVVVATV--NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR----GTGEEAGA 130 G V + +P + + ++ + TI + G EA Sbjct: 162 GEVYIRPAGDALRPINLFVSSATAT-YTLLLRRSDTPADTIVIRDKTPQALRPGGPEAAP 220 Query: 131 WETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVR 190 + + + + A+ ++PA +V + +Q + G + Sbjct: 221 SGPAPSHVRAMKGLLVAMSSNRVPAD-VRVEEASKPVQLWTEARFTLLRRYEGRGYVGEK 279 Query: 191 FAVENKTLSALNIRESDFWQPGTRA----VMFSQPASQLLAGARMDVYVIRDG 239 +A++N +L+ + + E +F +P +RA + L G VYVIR G Sbjct: 280 YALQNVSLAPMVLAEQEFDRPDSRAGGEITGIAIEHHNLRPGETTSVYVIRRG 332 >UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUX3_PERMH Length = 252 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 71/187 (37%), Gaps = 12/187 (6%) Query: 35 NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILE 94 G + +SN N+ P +++ S L+ Q V+V +K+P ++ Sbjct: 25 EGKPLLLDVSNQVSNIIEFP-EKVKKAISASQQLSAKIQ--GNKVIVLLPSKEPADLLVS 81 Query: 95 TERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAW-------ETSTPYESLLVTISQA 147 T+ G ++ P+ + +++V ++ A E YE L+ I +A Sbjct: 82 TKSGKVYALLLNPKIIPTQIVKIVDKQIEEEKKKKAKKEKVKQIEKGKDYEEKLINILKA 141 Query: 148 VRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESD 207 G+L +Y+V +TL+ + G+ ++ + K A I E Sbjct: 142 AINGQL-DDYYEVKRKVQTLETQNYF-IEITKEYQGDEFGVLLGKIYPKKKDAKPITERL 199 Query: 208 FWQPGTR 214 Q +R Sbjct: 200 LAQVLSR 206 >UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA1_PARUW Length = 230 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 9/177 (5%) Query: 33 MVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG---ALTNNEQTASGGVVVATVNKKPF 89 + +S+T N + RI V + + ++ E T + + K Sbjct: 25 LNTTSLLPCYLSSTYQNRVMIENGRIKKVITPESDRLSIQIEELTGQAFIFARDPHLKEI 84 Query: 90 TFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT-GEEAGAWETSTPYESLLVTISQAV 148 + + ++ G+ I E + L + A E + ++ Q + Sbjct: 85 SLSVISDSGVIQDIHICFIERQPEVVVLQEPEQKECSPGVPAAEELS-----ILKQVQEI 139 Query: 149 RGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRE 205 G++P G+ ++ + G+ A + G+ + + + N + E Sbjct: 140 VAGRIPTGYRHKSISSQKRTLKKGIELTLKAKFIGSENTLYLYQLANTGKQPQTVLE 196 >UniRef50_C9NP33 Type III secretion system outer membrane pore YscC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NP33_9VIBR Length = 686 Score = 52.5 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 40/96 (41%), Gaps = 2/96 (2%) Query: 143 TISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVA-DAVWTGNHLKMVRFAVENKTLSAL 201 +++ G +P G+ + + + + L+ A D + G ++ + N + Sbjct: 571 DALRSLIKGYIPNGFEKGKLAEPHCRKDVILTKFAKDDQYIGPEFNIIAGTIYNPSSGRQ 630 Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 E + G AV + P++ L G + +++V+ Sbjct: 631 RYDEKNCASQGVLAVS-AWPSTLLEPGEKAEIFVVT 665 >UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfuromonadales RepID=A1AKM1_PELPD Length = 315 Score = 52.5 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%) Query: 17 CSVMAANGTLAPTVVP--MVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74 +V +N A P ++ +I +S++ N P + + S + +T Sbjct: 30 TTVDTSNEKPAEGEFPTVVLPEAATAIRLSSSDINRIACPSEISEVLTSTEKGITVKITG 89 Query: 75 ASGGVVVATV--------NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE 126 V V + P F + S+ A P+ +TI+L S L Sbjct: 90 KDAFVKFKVVKKGDKFSYSSTPTEFYVVC-GDKVFSMVAFPQRVPSQTIRLSSGLEKKIR 148 Query: 127 EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETL-QAPAGLSSVADAVWTGNH 185 E + + P+E ++ + V +P + K + L+ G Sbjct: 149 ENLSLYSGLPFEKKVLKAIREVYTENIPDSYTINKQEKRFITFKEILLTLKRTVDIEGEG 208 Query: 186 LKMVRFAVENKTLSA-LNIRESDFWQPGT--RAVMFSQPASQLLAGARMDVYVI 236 L++ + + + + E F + + S L G ++V+ Sbjct: 209 LRIKEYEASLRGATPEFKMNEKMFLRAALAENPIAISLERHILRTGDSSRIFVV 262 >UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ3_SYNAS Length = 284 Score = 51.7 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 12/224 (5%) Query: 27 APTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNK 86 A V ++ + +S++ N T G+ V S + +T V T K Sbjct: 52 AEGAVTVMPEVAQPVELSSSDVNRITCQGEIKDVVYSREKGITVKFSGRDAFVKFRTGLK 111 Query: 87 KPFTFILETE-------RGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYES 139 + T S+ A+P+ R+I+L + + + P+E Sbjct: 112 DGKSTYSTTPSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKNRSLFGALPFEK 171 Query: 140 LLVTISQAVRGGKLPAGW-YQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA--VENK 196 +++ +++ ++P + P + L + AV G +++ + + Sbjct: 172 KVLSAIRSLYTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGTLAGG 231 Query: 197 TLSALNIRESDF--WQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + + E DF + T + S L G + +V+ Sbjct: 232 DKDRIELGEKDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVES 275 >UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT8_9SPHN Length = 255 Score = 51.7 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 79/258 (30%), Gaps = 33/258 (12%) Query: 4 NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPG-------- 55 A+I L A + + +SI +SN N G Sbjct: 10 APAALITACLPVPTFAQA---------IMALPDQTSSIRLSNRDINHLVCQGGEIEDVKF 60 Query: 56 --DRIIAVNSLD----GALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109 ++ IAV E +G V + P F + T G + A P + Sbjct: 61 SAEKAIAVEKAGADAWVKFLVKESDDAGQVT-RSYVTAPSEFFV-TCNGAIYPLYAEPSD 118 Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQA 169 +T+ L G E V+I+ ++ ++P + + V+ L Sbjct: 119 MPAQTVTLAPGASQRARANGELLGPLVEEERAVSITLSMLQDRVPPSFTDIAVSPRPLTL 178 Query: 170 PAG----LSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF--WQPGTRAVMFSQPAS 223 A ++ G L + +E + +I E F G R + Sbjct: 179 SAAPALRITERRRVAIEGTGLSASEYWIE--ASADSDIDERLFLGTAMGARIFSVTLDRL 236 Query: 224 QLLAGARMDVYVIRDGEG 241 L AG + ++R GE Sbjct: 237 SLRAGESARLILLRRGEA 254 >UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW7_RHOS4 Length = 239 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 68/223 (30%), Gaps = 35/223 (15%) Query: 35 NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKK----PFT 90 G I+ S +V GDRI + + +G V + K P T Sbjct: 28 PNGSVRISASAEEVTRISVAGDRIRRIIKDQTSFQEMNDETTGDVFLRYAGDKAKLVPET 87 Query: 91 FILETERGLNLSIQAVPREGAGRTIQLVS-----------------DLRGTGEEAGAWET 133 + TERG+ +S + P G L+S + R G E E Sbjct: 88 GYILTERGVTISYELTPSARLGAETVLISVAGMPPEGATAGAAPAAEARSEGFELAGGEG 147 Query: 134 STPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAV 193 Y S LV ++A + + + S V TG K++ V Sbjct: 148 GGGYASGLVAFTRATI---------DKHIAGKAAPKRSHGSVVGSESGTGMRAKVI---V 195 Query: 194 ENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 +R DF+ V + A L V V+ Sbjct: 196 AAGGRGGRYVRPQDFYTSKVLGVWVQRNA--LGPSDHAWVVVV 236 >UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1 Length = 424 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 33/252 (13%) Query: 19 VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGG 78 V A N V + GG + +S N + +V++ A + G Sbjct: 157 VEARNRYKEVQRVNVPPGGNVVLPVSRGLQNRISTSFKNA-SVSTSTPAEEASIFVNGGD 215 Query: 79 VVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQL-------VSDLRGTGEEAG 129 V ++T KP +L ++ ++ VP + G I + + R T + Sbjct: 216 VFISTNTDKPIGIMLSEDQVPESTYNLTLVPLDVPGAMISVTTSLSPSMQAKRETSLDKQ 275 Query: 130 AWE----------------TSTPYESLLVTISQAVRGGKLPAGWY----QVPVTKETLQA 169 +E ++ ++ + V G++P+G+ ++ + Q+ Sbjct: 276 NYEEMLARSQSEELAPSDPKQDDHKQRIIDLLTPVALGEVPSGFSLQQDRLSRIPASEQS 335 Query: 170 PAGLSSVAD--AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLA 227 P + A G+ + V+N + + G A A L Sbjct: 336 PCNFNMYAKLGQRLVGSRELIDVILVKNDKPYGQIVADQQCMAEGVIASALFDKAY-LQP 394 Query: 228 GARMDVYVIRDG 239 G ++Y++RD Sbjct: 395 GEETELYIVRDK 406 >UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4M8_BURCH Length = 159 Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 11/158 (6%) Query: 83 TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE--EAGAWETSTPYESL 140 T + T + + G + VP +++ + + +A A++ Sbjct: 6 TALNESITVFVIDDAGTTYRLLLVPGPRPAEDVRIEPPAARSTQALQASAFQRRVK---- 61 Query: 141 LVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSA 200 L+ ++ A G + + + ++ + + N + + Sbjct: 62 LMMLAMAGGRGAPQLSYTSLDTVVPLWKE---AVLTLVRQYSDGDFIGETYTLSNTSHTD 118 Query: 201 LNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + I E + + PG A+ L AGA VYV+R+ Sbjct: 119 MAIDERELYAPGVLAIAIENA--NLPAGASTIVYVVRE 154 >UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersinia enterocolitica RepID=B0RL12_YEREN Length = 262 Score = 44.4 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 45/271 (16%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVP-GDRIIAVNS 63 N ++ +L + +V A T + ++ +SN N G+ + V S Sbjct: 2 NKLLLICALSLTSAVATAKVNNISTQRVLPEVST-TVTLSNRDVNRIVCESGEAVKPVFS 60 Query: 64 LD-----GALTNNE---------QTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109 + + + Q+A G + +P L T + P+ Sbjct: 61 KEKPMKVEIGADRKTFFVKFLFLQSAGGNQYYS----EPTELYL-TCGNATFELIINPQH 115 Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGG------KLPAGWYQ---- 159 A R + L S T +E ++ E +S +V LP + Q Sbjct: 116 EAARKVLLGSGTANTIKENQKLFSALSLEETATQLSISVMKDANDSGLGLPPTFEQQAIN 175 Query: 160 -----VPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF----WQ 210 + + P L + G LK +F + + L + + E F + Sbjct: 176 GSWEKASADRRGVAVPIELKKDREVNVEGTGLKATQFTI--RALRNVQLSEMMFLNTRYG 233 Query: 211 PGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241 A+ + L+ +M VI + EG Sbjct: 234 KNIFAITLESLS---LSSGQMTSLVIIEREG 261 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae Rep... 247 2e-64 UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK... 219 4e-56 UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp... 209 5e-53 UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serrati... 205 1e-51 UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID... 201 2e-50 UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638... 196 6e-49 UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK... 191 2e-47 UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=... 191 2e-47 UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=... 189 8e-47 UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK... 184 3e-45 UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly... 181 2e-44 UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrio... 179 6e-44 UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acineto... 179 8e-44 UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovo... 178 1e-43 UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK... 173 3e-42 UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acineto... 170 3e-41 UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia c... 166 8e-40 UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9... 161 2e-38 UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenopho... 159 5e-38 UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Maripro... 159 8e-38 UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photoba... 158 1e-37 UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax... 155 1e-36 UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatole... 153 5e-36 UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkhol... 152 1e-35 UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 T... 151 2e-35 UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkhol... 151 3e-35 UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly... 150 5e-35 UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax... 148 1e-34 UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythro... 146 7e-34 UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly... 145 1e-33 UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobaci... 144 2e-33 UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosph... 141 2e-32 UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepI... 137 4e-31 UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2 136 8e-31 UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderial... 136 8e-31 UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK... 135 1e-30 UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas Re... 135 1e-30 UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betapro... 133 5e-30 UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=... 133 6e-30 UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus... 126 7e-28 UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingo... 125 1e-27 UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfu... 125 2e-27 UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylo... 122 8e-27 UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingo... 120 3e-26 UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvula... 118 2e-25 UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkhol... 117 3e-25 UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1 117 3e-25 UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candida... 107 2e-22 UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rh... 104 3e-21 UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Perseph... 95 2e-18 UniRef50_C9NP33 Type III secretion system outer membrane pore Ys... 82 2e-14 UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enter... 72 1e-11 Sequences not found previously or not previously below threshold: UniRef50_C5SIK3 Putative uncharacterized protein n=1 Tax=Asticca... 96 1e-18 UniRef50_A0R7R1 Putative uncharacterized protein n=1 Tax=Pelobac... 96 1e-18 UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersini... 81 3e-14 UniRef50_A0L343 Putative periplasmic protein n=1 Tax=Shewanella ... 73 7e-12 UniRef50_Q1MXI1 Putative uncharacterized protein (Fragment) n=1 ... 73 8e-12 UniRef50_C1SHE4 Putative uncharacterized protein n=1 Tax=Denitro... 67 4e-10 UniRef50_C6CGU4 Type III secretion outer membrane pore, YscC/Hrc... 59 1e-07 UniRef50_Q5ZWU3 Putative uncharacterized protein n=8 Tax=Legione... 54 5e-06 UniRef50_A4V6Q8 Putative exported protein n=1 Tax=Pseudomonas fl... 51 4e-05 UniRef50_Q93PY6 RscC n=2 Tax=Pseudomonas fluorescens RepID=Q93PY... 49 1e-04 UniRef50_Q01723 Hypersensitivity response secretion protein hrpH... 49 2e-04 UniRef50_Q1MY42 Putative uncharacterized protein (Fragment) n=1 ... 42 0.019 >UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae RepID=TRAK2_ECOLX Length = 242 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 239/242 (98%), Positives = 240/242 (99%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 MRKNNTAIIFG LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA Sbjct: 1 MRKNNTAIIFGGLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD Sbjct: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD+V Sbjct: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADSV 180 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 WTGNHLKMVRF VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE Sbjct: 181 WTGNHLKMVRFVVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 Query: 241 GN 242 GN Sbjct: 241 GN 242 >UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK n=4 Tax=Enterobacteriaceae RepID=B5PME8_SALET Length = 246 Score = 219 bits (559), Expect = 4e-56, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 2/242 (0%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N A +FG+ AA +P + + GGQ ++ISNT PN+ +PGD++ A Sbjct: 1 MKNNLPAFLFGTAMMVVMPPAAQ-AQSPATISLPQGGQFRLSISNTDPNMIFIPGDKVTA 59 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 + + G L + T +GGV+ +V + FT +ET G S+ A P +G GR +L+S Sbjct: 60 ITAPGGMLADKRLTTAGGVLFTSVATRTFTIFVETALGQTFSVVATPVKGEGRVYRLMSA 119 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 + E WET+ YE LL+++++AV G +P G+ +V + ++ P G S Sbjct: 120 EPPSRPETRKWETAQAYEKLLISLNRAVLTGDIPDGYGEVKPLSDGIRLPGGFSVTPLKA 179 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD-G 239 W G+ L+ R+ + N +RE DFW+PG RAVMF A L+ G RM V VIR G Sbjct: 180 WAGDQLRADRYELRNANTWGGALREQDFWKPGVRAVMFDNNAQALMGGGRMTVTVIRGNG 239 Query: 240 EG 241 EG Sbjct: 240 EG 241 >UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUD0_AERS4 Length = 242 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 86/239 (35%), Positives = 121/239 (50%), Gaps = 6/239 (2%) Query: 2 RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61 RK + L +V + GG + ISN +PNL VPGDR+ + Sbjct: 4 RKPFHPWRWLPLLV-LAVAPTTMAATAVTLTFSPGGHLDLPISNVNPNLIVVPGDRVTNI 62 Query: 62 NSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDL 121 +S G LT+ + T +G + +T + KPFT +ET G SI A PR GR+ +L Sbjct: 63 SSAAGLLTDKKNTQAGAALFSTASDKPFTLYVETRLGQVFSINATPRATEGRSYRLFPTT 122 Query: 122 RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVW 181 A WET+ PYES+LV +++A LP G+ + KE AGL + D+ W Sbjct: 123 PTPRPVAKVWETAQPYESMLVALNRA-----LPEGYGPASIDKEAPFTRAGLQATPDSAW 177 Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 GN L +VR+ + N + +RE DFW PGTRA+M +L+AGA +YVIR E Sbjct: 178 DGNALHIVRYRLTNPLSVPVVLREPDFWMPGTRAIMVHPRYQRLIAGASTWLYVIRTQE 236 >UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S163_SEROD Length = 245 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 7/245 (2%) Query: 1 MRKNNTAIIFGSL-FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII 59 MR I+ G L FS SV A+ V N Q + +S+T+PN V G+ I Sbjct: 1 MRLAAPVIVLGILSAFSVSVAASAANRDAKSVYFTNEDQLPVTLSSTNPNKIIVEGELIT 60 Query: 60 AVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119 + A T G +++A + FT ++T+RG ++S+ G GRT +L+ Sbjct: 61 NIYGPGNAYE-ERNTDDGALMIALNSAATFTLYVQTDRGSSVSLNVTAVSGPGRTYELIP 119 Query: 120 D--LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSV 176 + E+A AWE S PY L++I+QAV G +P + + PV++ AP GL Sbjct: 120 RSLPKIDNEDAKAWEESQPYVDTLMSIAQAVVNGDVPPDFVEYPVSRAAAYAPPIGLQFF 179 Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 A+ W G+HL++ R+ ++N + ++ +E F+ PG R + S L G + V+VI Sbjct: 180 AEKQWIGSHLRVTRYRMKNLSNLSMAFKERQFYVPGVRGISLS--TQSLFPGGQGYVWVI 237 Query: 237 RDGEG 241 +G Sbjct: 238 SRFDG 242 >UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF3_ECOSE Length = 259 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 93/242 (38%), Positives = 132/242 (54%), Gaps = 7/242 (2%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64 +A+ +C V AA P VP+ QA IA+SNT PNL VPGDRI+AV+S Sbjct: 14 LSAVALLCSL-ACGVQAAPSAQLPVRVPVSPDAQARIALSNTQPNLLVVPGDRIVAVDSA 72 Query: 65 DGALTNNEQ-----TASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119 G TN A+GGVV+ T PFTF + TE GL +S+ P+ GR + L+S Sbjct: 73 QGTFTNAGDYGQTGMANGGVVLMTEKTTPFTFYVRTEGGLVVSVIGQPQARDGRVVHLMS 132 Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQ-APAGLSSVAD 178 D + A WE S Y +LLV + +A+ G++P G+ PV E + PAGL+ A+ Sbjct: 133 DQPVRQKAAAPWERSHDYVALLVDVQKALLRGEVPPGYVASPVVGEPVFSLPAGLTLRAE 192 Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 +W+G+ L++ R+ V N+ A + E F PG R+V+ S A LL GA +V+V + Sbjct: 193 HMWSGDALRVYRYRVSNRQSEARALPERLFSAPGVRSVLISPWAETLLPGASAEVWVTVE 252 Query: 239 GE 240 E Sbjct: 253 QE 254 >UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS3_ENT38 Length = 246 Score = 196 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 127/241 (52%), Gaps = 9/241 (3%) Query: 4 NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63 A++ S F+ + AA AP +P N ++ +SNT+P V G+ I +++ Sbjct: 8 AAAAVLLASGIFTSGLRAAT---APAAIPFENDAAFNVTLSNTNPTKVVVDGELITSISG 64 Query: 64 LDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQL--VSDL 121 GA + T G ++++ + + FT ++T+ G +LS+ P+ G G+T++ +S Sbjct: 65 PTGAY-DQSTTDDGALILSPLVGQNFTLFIQTDHGSSLSLNVRPQAGNGKTLRFTPMSPP 123 Query: 122 RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAV 180 ++A AWE YE LV +S+AV G++P + + PV++ T P+ + + Sbjct: 124 LRKNDDAKAWEEGQTYEKTLVALSRAVVNGQVPDDYVEYPVSRMTAYTPSTPVRLTPERQ 183 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 + GNHL++VRF + N ++RE DFW G RAVM SQ +QL AG +V+ + Sbjct: 184 FVGNHLRIVRFRMNNPGSITQSLRERDFWLKGVRAVMLSQ--NQLYAGGEGYAWVVFSDD 241 Query: 241 G 241 G Sbjct: 242 G 242 >UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK n=2 Tax=Pantoea sp. At-9b RepID=C8QE99_9ENTR Length = 245 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 6/241 (2%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+K + + + +A+ P N +SNTSPN + G+ I A Sbjct: 1 MKKTVSVLTALAALTLVPAVASAVVPGPAGTVFENNAHLKAQMSNTSPNKIVIDGELITA 60 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 V +GA T + TA G +++ + + FT +ET G+++S+ P+ G+GRT++L+ Sbjct: 61 VTGPEGAYT-KDSTADGALLITPLTGQDFTLFIETAGGVSVSLDVSPKPGSGRTLELIPA 119 Query: 121 --LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQ-APAGLSSVA 177 +A AWE S P++ LV++++ V G +P G+ + ++ PAG+ Sbjct: 120 DVPLKPNPDAKAWEESQPFQKTLVSVARTVANGGVPDGYTDMKASRAPAYNPPAGVLLTP 179 Query: 178 DAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 + G+HL+++R+ ++N + E FWQ G RAVM S L A V+VI Sbjct: 180 ERQLAGSHLRVMRYRMKNTGYVTRTLSEKQFWQQGVRAVMLS--TRTLYANGEGYVWVIF 237 Query: 238 D 238 Sbjct: 238 S 238 >UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB08_ERWT9 Length = 248 Score = 191 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 8/241 (3%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAP--TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN 62 N + + + P + Q + A S SPN V G++I ++ Sbjct: 3 NKKYFLSPALLIAAAFQTHAAVVPGVKEISFGPNAQVNAAFSQVSPNRIIVQGEKITDIS 62 Query: 63 SLDGALTNNEQTASGGVV-VATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS-- 119 GA + +Q G ++ +A + FT + T++ LSI+ +P+ G+T+ V Sbjct: 63 GPGGAFDSQKQPDGGALISLAPGVSQSFTLFVVTDKNSALSIEIIPKSIPGKTLSFVPQT 122 Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSVAD 178 E +WE YE LV IS+++ G +P + + PV++ +PA G++ AD Sbjct: 123 APMKVKPEEKSWEEGQSYEKTLVDISKSIINGVIPQDFSEYPVSRVQAYSPAVGVTLRAD 182 Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + G H+++VR+ + N + ++ E F+ PG RAVM S L + YVI D Sbjct: 183 KHFIGPHMRIVRYIMNNPSYLNQDLTEKQFYAPGVRAVMLS--TRNLYSHGEGYAYVIFD 240 Query: 239 G 239 Sbjct: 241 D 241 >UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=Q4LC34_SODGL Length = 206 Score = 189 bits (479), Expect = 8e-47, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 136/201 (67%) Query: 41 IAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLN 100 + +SNT PNLF+VPGD ++AV+ +D +L TA+G ++++T+NKKPFTF++ET RGLN Sbjct: 1 MVLSNTEPNLFSVPGDSVVAVSGIDESLVRYAPTANGALMLSTLNKKPFTFVIETARGLN 60 Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQV 160 S++AVP+ G+GRT LV + +G A WE S PYES+LV ++QA+ G+LPAG+ + Sbjct: 61 FSLRAVPQAGSGRTFSLVGEGQGVSVAAKVWEQSVPYESMLVALNQALMAGRLPAGYGKA 120 Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQ 220 P T E L PAGL + A VW G+ LK+VRF V N + + + E DFWQPG AVMF Sbjct: 121 PATHERLPLPAGLWAEALWVWKGHRLKVVRFRVTNPGTTPVRVNEPDFWQPGVWAVMFDT 180 Query: 221 PASQLLAGARMDVYVIRDGEG 241 P +++ RM V+V GE Sbjct: 181 PTREIVPAGRMGVWVTLSGEA 201 >UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK n=6 Tax=Shewanella baltica RepID=A6WUR6_SHEB8 Length = 272 Score = 184 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N + F SV+AAN P + I +S+ N V GD+I + Sbjct: 1 MKIANPLVFAACALFPMSVLAAN--TPPKHYGFNDSETVPIELSSVDINRLVVEGDKITS 58 Query: 61 VNSLDGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118 ++ +G T + SG V PFT + TE+G + + P+ T Sbjct: 59 IDCPEGFCVVTGTKSDKSGAARVNLNLAMPFTAYVSTEKGRHFGLFISPKAIPAVTSIF- 117 Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRG----GKLPAGWYQV-------------- 160 + E+ ++ TPY +++ + + GK G+ Sbjct: 118 TAEHYREEQPSVFDKKTPYPTMMTEFTAQMIRYLATGKPIDGYRVHVVNDDLERTTVDSE 177 Query: 161 --------------PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206 + ++ + PAGL++ V+TG H + + V N + + + Sbjct: 178 PRGTETSIDDAMFTRLNEQQMPKPAGLTTEPAFVFTGKHFNGIIYRVTNHAALPVTLTTA 237 Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241 F+ P TRA S +L ++V+ GE Sbjct: 238 QFYSPTTRAAALS--TYELAPKQTGHLFVVSGGES 270 >UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly protein TraK n=2 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T4_LISDA Length = 243 Score = 181 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 18/250 (7%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M K + +L F+ +V+A AP V + S+ +S+ N V D+I + Sbjct: 1 MSKYPAVLGLCALIFAPTVLAT----APNTVLFSDNETVSVNLSSLDINRLVVKDDKITS 56 Query: 61 VNSLDGALT-----------NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109 V G T G +++ +PFT + TE+G + + P Sbjct: 57 VTCPTGFCTMPANPVDESGTGAPVDPQGAGLISLNVLEPFTLYITTEKGRSFGVFVRPLA 116 Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQA 169 T +S R T ++A +E +PY L + + +P G+ +T + Sbjct: 117 VPAITTVFLSTERDT-QKAQEFEKQSPYTQTLAALISHMIKETIPEGFAFQRLTVKKPIE 175 Query: 170 PAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGA 229 A L A + G HL + + NKT + + + F++ G +AV FS + + Sbjct: 176 QAKLLLTPIASYQGEHLTGISVKISNKTAQYIQVEPTSFYKAGVKAVSFS--SMSIPPHG 233 Query: 230 RMDVYVIRDG 239 + +Y I+ Sbjct: 234 SIYMYQIQGR 243 >UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrionales RepID=B6ESX6_ALISL Length = 251 Score = 179 bits (454), Expect = 6e-44, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 13/250 (5%) Query: 1 MRKNN--TAIIFGSLFFS-CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDR 57 M+KN ++ ++ S S L P + I +S+ + N V D+ Sbjct: 1 MKKNPSQPLVMIAAVLLSFLSFEGRAKNLPSNTYPFNDNDTVPIVLSSLNINRLVVRDDK 60 Query: 58 IIAVNSLDGALT--NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTI 115 II ++ G T N+Q ASG + + PFT + T+ G N ++ PR Sbjct: 61 IIGLDCPTGFCTSKGNKQDASGSITLRLNIALPFTAQVTTKNGRNFTLFITPRAIPALVS 120 Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVR----GGKLPAGWYQVPVTKETLQAPA 171 + + T +E + Y + L ++++ G L G+ V TL Sbjct: 121 EFI-GTANTRQEKSVFTRDFDYPTALTQFTKSMMLWSERGFLIDGFSLHHVDPSTLPKDT 179 Query: 172 G-LSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230 L+ + V+ G + + V N++ + + S F+ TR+ + LL Sbjct: 180 NPLAIIPQTVFVGKEYSGIIYRVLNQSSGQVTLSTSQFYSYSTRSAAIT--KDTLLPNED 237 Query: 231 MDVYVIRDGE 240 M +Y++ G Sbjct: 238 MTLYIVTGGG 247 >UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Y8_ACIBC Length = 240 Score = 179 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 80/248 (32%), Gaps = 20/248 (8%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ + I F S+ T A + + + +SNT PN+ V G RI+ Sbjct: 1 MKLQLSKI----ALFISSIFLTTSTFAAQHITKADQETVQVTVSNTEPNVLVVDGRRIVN 56 Query: 61 VNSLDG-ALTNNEQTASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGRTIQ 116 + D AL G + P T + + G + PR + Sbjct: 57 LVPSDVTALDTLPDKEQGTLYFKISPYFQNTPITLFVTDDEGTRYKLVLQPRSVGAEEVV 116 Query: 117 LVSDLRGTGEEAGAWETSTPYESLLVTISQAV------RGGKLPAGWYQVPVTKETLQAP 170 LV G AG + S Y + + + L K + Sbjct: 117 LVPPKPG----AGTSKRSQSYLQQIKELMYVMGDDAENPQETLAVDGISRSFVKAEIPLW 172 Query: 171 AGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230 V + + + + + N T +N+ E +F++ G AV L G Sbjct: 173 KESKFVLLRRYDTDGMYGEMYQLTNLTNKTMNLLEQEFYRKGVSAVSIQN--LTLSPGRS 230 Query: 231 MDVYVIRD 238 VYV+R+ Sbjct: 231 TFVYVVRE 238 >UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WDF8_ACISJ Length = 245 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 11/240 (4%) Query: 10 FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL-DGAL 68 ++ S++A A VV + G + IS N + G RI V G L Sbjct: 9 LSAILLLTSLLA-TEAGATQVVENADRGHVQVNISVNETNRLAIDGRRIANVVPSVKGVL 67 Query: 69 TNNEQTASGGVVVATVNKKP----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT 124 + A G ++ P T + E+G+ + VPR AG I + Sbjct: 68 AGQKDEALGAYYFTLASESPNQGTVTVFVSDEKGVTYKLILVPRPVAGEEIIIRPPSEKA 127 Query: 125 GEEAGAWE--TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWT 182 + A + Y+ + + + +L + + + + A + Sbjct: 128 TPSSRAAADGRTVSYQRRIKDLMLVMADDELKDS-VETIQVNKEVPLWKEGRLILVAKYM 186 Query: 183 GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242 + ++ + N + S + + E + ++ G RA+ L+ G D+Y++R+ + N Sbjct: 187 DGEVVGEKYRLTNVSPSEMLLVEQELYRRGVRAIAVEH--HTLMQGDGTDIYIVRERKDN 244 >UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK n=2 Tax=Legionella RepID=D1RMP1_LEGLO Length = 239 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 13/244 (5%) Query: 4 NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63 N + S F+ S+ A N + G + ++++S+ + N V G+RI+ V+ Sbjct: 2 NALQLFVLSSVFATSLHAGNTV---ATLKFEEGERFALSLSSLNFNRIDVEGERIVKVSF 58 Query: 64 LDGALTNN-----EQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118 + + E G VV+ + P T T + S P E G+TI+LV Sbjct: 59 PEHSFIIEQSKESEDDLDGAVVLKPLAHIPLTVYFTTNLNHHFSATVSPTEDLGKTIKLV 118 Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD 178 S + A A E S Y+ + A+ G P+G+ +V + T + L Sbjct: 119 SKKLKGFDYAKAQEQSQ-YQQS--DLMTALMEGTTPSGFQEVGIKPTTFRLHKHLKVTLV 175 Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 G + +EN++ + + S F P + S+ L Y I Sbjct: 176 KQVRGKESSGYVYRIENQSNKPMELTASLFEHPKLMTMELSEKM--LQPSQTAYFYGIYR 233 Query: 239 GEGN 242 + N Sbjct: 234 EQSN 237 >UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY8_ACIJO Length = 243 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 80/240 (33%), Gaps = 13/240 (5%) Query: 10 FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN-SLDGAL 68 + + S++ + A V ++ +S+T N V +I +V S+ AL Sbjct: 7 LALIPLTVSLLFSPFAQAVQHVDKAYLDNVTVNVSSTEQNALVVQDRKITSVIPSIADAL 66 Query: 69 TNNEQTASGGVVVA---TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTG 125 + G + + + + ++G + P G +L+ Sbjct: 67 EYEKDVTQGVLYFKVAPWYANRTISAFVNDDQGTRYKLVMRPTASLGAE-ELILIPPKVK 125 Query: 126 EEAGAWETSTPYESLLVTISQAV------RGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179 E + + S Y + + + +L + + + Sbjct: 126 EGSSTDKGSQSYLQQIKELIYVMGDDADDPQDELAIEGISRSFVNQQIPLWKEARMTFAS 185 Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239 + G+ L + V N T S L + E +F++ AV LL G +VYV+R+ Sbjct: 186 RYDGDGLYGEHYKVTNITNSNLILLEQEFYRKKVVAVSIEH--LNLLPGQTTNVYVVRER 243 >UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI3_BURCJ Length = 248 Score = 166 bits (419), Expect = 8e-40, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 15/252 (5%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M N I + F +AA L +S T N + G I Sbjct: 1 MFSNLRKWIAAATLFP---IAAANVLPANAATAGASEPREYTVSATEQNRLEIAGRAIKK 57 Query: 61 VNSL-DGALTNNEQTASGGVVVATVNKK----PFTFILETERGLNLSIQAVPREGAGRTI 115 V GALT + +G A N T + ++G + PR I Sbjct: 58 VVPSHKGALTYVKDKGNGVFYFAFANGGDGMGTETLYVIDDQGATYQLLLQPRRVPSANI 117 Query: 116 QL--VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLP---AGWYQVPVTKETLQAP 170 + D G A TS+ Y+S + + + ++ + + Sbjct: 118 IVPAAGDAPGRSAAARTAATSSAYQSAIKDLVYEMAAAQVDPSADPAASAVPVHQDVPLW 177 Query: 171 AGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230 D + + ++ + N + S + I E + ++PG V Q L G Sbjct: 178 KEARLTFDTKYVDDTFVGEQYTLTNVSSSDMVIAEQELYRPGVVVVAVEQ--QTLAPGDS 235 Query: 231 MDVYVIRDGEGN 242 VY++R+ + Sbjct: 236 TRVYIVRERGRD 247 >UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9_9GAMM Length = 239 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 25/249 (10%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 MRK + + S M AN +P+ ++ +S + N V D+II Sbjct: 1 MRKPLSVAL---ALISTMTMGANS------IPVKENSDIALTLSQNNYNRIVVKNDKIIE 51 Query: 61 VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 ++ G V V PFT + TE+G + S+ E G+TI+LVS Sbjct: 52 AVFPPNSMAIKRDEQDGSVYVMLSATNPFTLFVTTEKGTHFSVTLNGEESLGKTIELVSP 111 Query: 121 LRGTGEEAGAWETST--------PYESLLVTISQAVRGGKLPAGWYQVPVTKE---TLQA 169 + + A T ++ + + + + V + ++ + Sbjct: 112 PQPKVVASQANTTKDNMKTITQEAVPEAILALLTHM---EQHKPFADVRIKRQFGKAQRW 168 Query: 170 PAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGA 229 GL+ + W G LK + N+ L + + F + GT A+ FS+P+ + G Sbjct: 169 SKGLTLLPKESWDGKLLKGETIELYNRGKEPLELSQEWFAKVGTLAIKFSKPS--IAPGE 226 Query: 230 RMDVYVIRD 238 + +Y ++ Sbjct: 227 KAMLYRVQG 235 >UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenophonus nasoniae RepID=D2U002_9ENTR Length = 227 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 11/232 (4%) Query: 13 LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE 72 + S S+ A N T+ P V +++SN PN+ V DRI+ NS G L + + Sbjct: 1 MLISTSIWAENLTVTPHSV-------VRLSVSNREPNVIAVMNDRIVEANSAAGKLADKK 53 Query: 73 QTASGGVVVATVNKKPFTFILETERGLNLSIQAVP-REGAGRTIQLVSDLRGTGEEAGAW 131 T SG ++ T PF+ +ETE+G ++ A+P ++ G + +++ A W Sbjct: 54 ATDSGALIFTTEETTPFSLYIETEKGFGFTVNAIPVKKSQGINVSVMNAEAKADSSAQEW 113 Query: 132 -ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAP--AGLSSVADAVWTGNHLKM 188 +TS Y + A +P G+ + A A + G ++++ Sbjct: 114 GKTSDSYSQFITRTFTAAMNDNIPTGFVKNGRVNVNWSASALANFRFRDSVSFQGKNIRL 173 Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 +R VENKT + + E FW T A+ F+ + L ++ ++++ + Sbjct: 174 LRVNVENKTSQPIQLNERVFWVLQTMAIAFNPTVNTLRPHEQVTLFLLIKEK 225 >UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F359_9PROT Length = 236 Score = 159 bits (402), Expect = 8e-38, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 77/232 (33%), Gaps = 15/232 (6%) Query: 19 VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL-DGALTNNEQTASG 77 A A ++ + IS+ PN + G I G + G Sbjct: 4 TAAPTSAFAIQILDAADSDSLVARISDHDPNRIRIAGGFITMAVGPRSGRIAIETDDKRG 63 Query: 78 GVVVATVNKKP-----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132 + V P FT L G + ++ P +G++ LV R + Sbjct: 64 QIFVRVNENVPDKHKAFTLFLTDAEGRDYTLLLKPARISGQS--LVIRPRRQRPQVSNPA 121 Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192 E+ + + +A+ G +P ++ T + + G + + V + R+ Sbjct: 122 GVEKREARIKRLVRAMALGDVPR-HCEISETDKRVPLWKGTNFHLNRVMRCGDFNVERYR 180 Query: 193 VENKTLSALNIRESDFWQPGTRAVMF------SQPASQLLAGARMDVYVIRD 238 + N + + E + + G AV ++ A + G V ++R+ Sbjct: 181 LANSGDKVIRMAEQELYSNGVAAVSVERMHLNAEGAVSIPPGNATMVIIVRE 232 >UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LW92_PHOPR Length = 244 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 15/243 (6%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64 II G S A T + + +S+ N V D+I ++ Sbjct: 7 FAIIIAGC----VSATAHAKNTPGTTYTFNDNDTVPVILSSVDINRLVVKNDKITGIDCP 62 Query: 65 DGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122 G + + SG + F + T++G + P+ G T + + ++ Sbjct: 63 AGFCVVSGTKTDTSGSARLKLNISVAFVAYVSTQKGRQFGMFITPQAIPGITSEFI-GVQ 121 Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRG----GKLPAGWYQVPVTKETL--QAPAGLSSV 176 T +E PY + L + + G++ G+ PV +T+ A L+ + Sbjct: 122 NTQHTPSVFEKKAPYTTQLAEFTAQMIRWTNTGEMMGGFSLHPVDPKTVTNTLTARLAVI 181 Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 D ++ GN +R+ ++N T + + + F+ R+ S QL +Y++ Sbjct: 182 PDTIFVGNTFSGIRYKLKNNTTTTQTLTTAQFYSRAARSAALS--TDQLAPNDTAWLYIV 239 Query: 237 RDG 239 G Sbjct: 240 TGG 242 >UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax=Sphingomonadaceae RepID=Q0KJJ0_9SPHN Length = 274 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 83/238 (34%), Gaps = 13/238 (5%) Query: 10 FGSLFFSCSVMA-ANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS----- 63 G+ + + A LA V + G S ++ GD+ +V+ Sbjct: 32 IGAALIALGALGLATPALADQNVMAADNGTVPCVASAKDLTRISLAGDQFASVSKITTGN 91 Query: 64 LDGALTNNEQTASGGVVVATVNKKPFT---FILETERGLNLSIQAVPREGAGRTIQLVSD 120 + G + ++ + P T F T +G R + +++ Sbjct: 92 PAEDFKIVNEPVRGDIYISVPDGFPRTSLSFFGTTRKGFVYKFVCQVRGTEAEQV-FIAN 150 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 T + A WE + E V ++QA+ G+ G+ E + L Sbjct: 151 AAITSDRARDWEVQSSPEDAAVRLAQAMYRGEAIDGFDMRSTVLEPVMV-GRLQVQQVGE 209 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 + G +K + V N A ++ E+ G A+ F P S+L AG VY+I+ Sbjct: 210 YRGAEMKGLVLRVRNTGRQAQSLDENMLAARG--ALAFMAPTSELAAGQEAAVYLIQS 265 >UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX51_AZOSE Length = 294 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 4/229 (1%) Query: 15 FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74 F S+ L + + G + +S N P AV + + Sbjct: 62 FGSSLSGDVNALKAQTIRVTPGQNEVVNVSMVQANRVGTPFAAPKAVGIIPEGMIVEAVG 121 Query: 75 ASGGVVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132 S + + + + P + + R +S+ VP+ +T L D+ G + Sbjct: 122 QSLYIQMPSTSTDPQSLFVTGSRPNDPVISLILVPQAIPSQTAILQFDVPEPGLQPDQNN 181 Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192 Y+ L+ + + ++P G + + + + L + ++ + R+ Sbjct: 182 EPDNYQQRLIQMMRQAAVNQVPVGMSEAALPRAVGRRGP-LLIRPEMRYSSATMDQWRYR 240 Query: 193 VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241 VE+ + + + E+ FW+ G RAV P+++L G VYVI D Sbjct: 241 VESISDEEIELDEAAFWERGVRAVAI-LPSTRLRKGDHAYVYVISDKTA 288 >UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=B3DCS7_BURM1 Length = 319 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 3/234 (1%) Query: 7 AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66 ++ G L + V N G ++ +S PN +P V++ D Sbjct: 84 IVLPGVLTVPGEGIGVPDPSNVQKVSWTNTGNKTVYLSADEPNRILLPFKNAYIVHTSDV 143 Query: 67 ALTNNEQTASGGVVVATVNKKPFTFILE-TERGLNLSIQAVPREGAGRTIQLVSDLRGTG 125 + EQ+ + V + +E + G L + VP++ +TI + D Sbjct: 144 QVDKREQSNNVYVYWTNAPSQARHLYIEPPDGGSALGLAIVPKKIPAQTILVTDDTGIVS 203 Query: 126 EEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNH 185 + Y S + + A+ GK P G+ QV + + A GLS+ D ++ Sbjct: 204 GRRPKSSPGSEYTSHIQDLMAAIALGKAPDGFSQVDIQLPPI-AMNGLSATVDTRYSSQE 262 Query: 186 LKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239 + + V N T S +RE +F P AV P LL G + V V+ Sbjct: 263 GDLYVYTVRNPTQSRAVLREEEFDGPEVIAVSI-YPKPVLLPGEKTRVIVMARK 315 >UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS1_LEGPH Length = 237 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 17/238 (7%) Query: 12 SLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNN 71 ++ FS ++ A A + + N I S PN + DRI + + L + Sbjct: 5 AMIFSLGLLIATAEGA-QIKTVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTLVDA 63 Query: 72 E---------QTASGGVVVAT---VNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119 +G + + + FT L TE+GL +++ P+ A +TI S Sbjct: 64 CNGKANCKLIDDTTGILTFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIVFKS 123 Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179 R A A ++ YE ++V +A+ G LP G+ Q ++ Sbjct: 124 -YRNPVIRARA-PHTSSYEKVMVGFLRALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRLL 181 Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 GN ++ F ++N T ++ +ES F PGT+ V ++ L +Y I Sbjct: 182 TVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKT--HLAPFETTRLYRIS 237 >UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ANL8_BURGB Length = 246 Score = 151 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 18/246 (7%) Query: 2 RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61 R + + F +A V + + +S NL T+ G R I Sbjct: 13 RLMLPLVAPLAALFVAGPASAISI-----VKGADRQAQQVFVSAAEYNLLTMSGGRQITK 67 Query: 62 NSLDGALTNNEQTASGGVVVATVN----KKPFTFILETERGLNLSIQAVPREGAGRTIQL 117 + A N + T + + G++ + VP +++ Sbjct: 68 VVPTVPGSLAWTQAGNQFWFKPSNPTALNETITIFVFDDAGVSYRLSLVPGPRPAEDVRI 127 Query: 118 VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGK-LPAGWYQVPVTKETLQAPAGLSSV 176 TG A + ++ + + A+ G + +P + + + Sbjct: 128 QPPASSTGRALRA----SAFQRHVKLLILAMSGAQSVPQ--VAYTSVETAVPLWKEATLT 181 Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236 ++ L + + N + + L++ E + + PG AV L AGA VYV+ Sbjct: 182 RVREYSDGDLVGETYTLANTSHNDLSLDERELYAPGVLAVAIEDA--NLPAGASTIVYVV 239 Query: 237 RDGEGN 242 R+ + Sbjct: 240 RERGDH 245 >UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly protein TraK n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU7_9VIBR Length = 238 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 10/236 (4%) Query: 5 NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64 AI F L S + A+ V+G ++ ++ S N V D+I+ + Sbjct: 3 PHAISFVLLSMSLNTALASSASPAQPHLFVSGDTVTLELNQRSLNRLYVDNDKILNLTCP 62 Query: 65 DGALTN--NEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122 N +G +++ PFT L TE+G L+++ P + R + + Sbjct: 63 THQCEVVQNPSDQAGSILLGLSEPHPFTAHLFTEQGRLLALEVQPSDTTTRVHRFIP--- 119 Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVW 181 G+ + +T + + G + VT ++ A G L AV Sbjct: 120 --GDASHPQTLNTRILGFVKDLMHWSSGEEPSVSMTIARVTHASVMAHRGDLELTPVAVA 177 Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 L + + V N + +I DF+ P A ++L AG R +Y+I Sbjct: 178 RQGPLSGIIYEVLNTSEGPTSISNRDFYSPSALAASLD--RNELPAGERTRLYLIT 231 >UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDC9 Length = 206 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 11/207 (5%) Query: 45 NTSPNLFTVPGDRIIAVN-SLDGALTNNEQTASGGVVVATV----NKKPFTFILETERGL 99 T N + G +I + GALT + A+G + + + + + Sbjct: 1 MTEQNRLAIDGRKITQIIPKQKGALTYVKDLANGVLYFTFADPDAAQGTESLFVVDDHND 60 Query: 100 NLSIQAVPREGAGRTIQLVSDLRGTGEEAGA-WETSTPYESLLVTISQAVRGGKLPAGWY 158 + PR I + + G A ++ Y+ + ++ + + Sbjct: 61 TYQLLLQPRRMPSANIVVPAVGGGEVRRTQAISTRTSSYQFAIKSLLEEMVAAHDDQDAQ 120 Query: 159 ---QVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRA 215 V + + + +T + L ++ + N + + I E + ++ G A Sbjct: 121 FSAAVTPVNQMVPLWQEAQLTLELRYTEDDLVGEQYRLTNVSTGDMVIAEQELYRKGVLA 180 Query: 216 VMFSQPASQLLAGARMDVYVIRDGEGN 242 ++ Q L G VYV+R + Sbjct: 181 IVIDQ--QTLAPGDSTAVYVVRGRTDH 205 >UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythrobacter RepID=Q2N5I0_ERYLH Length = 271 Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 72/248 (29%), Gaps = 12/248 (4%) Query: 2 RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61 R+ + + L +A A V + ++ + D V Sbjct: 26 RRPDPGLKLSGLAVIAFALAPVPAHADQFVEAADNATIDCELARGELTRIALIDDGFANV 85 Query: 62 NS-----LDGALTNNEQTASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGR 113 + + G + ++ +F ++ G A G Sbjct: 86 SKIASGFPYNDFQVTHEPVRGDIYISVPPQFAAARVSFFATSKAGYVYK-FACRLGGQEA 144 Query: 114 TIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGL 173 T +++ EA WE T E + + +A+ + G+ + G+ Sbjct: 145 TQLFITNPALAKSEAAEWEAETGPEDAAIRLIEAMATDAVLPGFT-ARAELSAPRRSGGI 203 Query: 174 SSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDV 233 A + G+ L RF V N +L + G A+ F+ L G Sbjct: 204 EVQLVAEYQGDELTGQRFLVRNLGQESLALGSEREGPAG--ALAFAYGRDALAPGEATSA 261 Query: 234 YVIRDGEG 241 +++ G Sbjct: 262 FLVFARGG 269 >UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly protein TraK n=17 Tax=Gammaproteobacteria RepID=C3NU46_VIBCJ Length = 300 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 79/230 (34%), Gaps = 18/230 (7%) Query: 22 ANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVV 81 T PT + M G I ++ N P + + D V V Sbjct: 56 TVSTDVPTTLLMTPGVNELIPVALGHLNRIVTPFESPQVRTTSDAQTQIK----GNVVYV 111 Query: 82 ATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRG------TGEEAGAWET 133 AT + P + + LS+ VPR R I L D + +A WET Sbjct: 112 ATDKESPVSLYITPPGQEAPALSVTLVPRRIPPREITLAIDGQQWPIKGVVNRKAATWET 171 Query: 134 STPYESLLVTISQAVRGGKLPAGW-----YQVPVTKETLQAPAGLSSVADAVWTGNHLKM 188 + PY L + + + +LP G+ Q + + Q + TG++ + Sbjct: 172 AQPYVDSLRDLLRHLALNELPQGYDIRLAGQTDTSPKCFQPGLKFGFKQGQIVTGHYFTV 231 Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 VE+ + E P A + P + LL G + ++YV+ Sbjct: 232 YVGLVESFADEPIEASEIACHAPDIVASAY-WPRNILLPGEKTELYVVVR 280 >UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J828_ACIF2 Length = 390 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 5/212 (2%) Query: 29 TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKP 88 + + +G SI +S +PNL P + + T +VV+T P Sbjct: 170 QNIRVHSGKTYSIIVSGVAPNLIETPFRHPEMLVTNSKLAT--PIVHGQNLVVSTTPAFP 227 Query: 89 FTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQ 146 + + +S+ +P++ + +L+ + Y +V + + Sbjct: 228 VGVYVTGKNPHDPMISLTMIPKKIPPKNYRLIIPGFIPSVAPTVTGQRSGYAQRMVHLMR 287 Query: 147 AVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206 ++P + Q S + W GN ++ ++++N + +N+ E+ Sbjct: 288 DAALKQVPENYRQSHKRLALPGPGGAFSWTWEFSWVGNRYRITAYSLKNTLVGPVNLMET 347 Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 +F+ PG + P L G + V+VI Sbjct: 348 NFYAPGVLSASV-YPHHHLYPGEKTQVFVITK 378 >UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G6C6_NOVAD Length = 252 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 77/225 (34%), Gaps = 14/225 (6%) Query: 28 PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN-----SLDGALTNNEQTASGGVVVA 82 +G +S F + D+ +V+ + + G + V+ Sbjct: 31 DQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTNEPVRGDIYVS 90 Query: 83 ---TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYES 139 T + +F T++G + + T +++ A WE+ TP E+ Sbjct: 91 VPETYAARSISFFTTTKKGFVYKVACRVEQIPA-TQVFITNPAIAKNRAADWESQTPIET 149 Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199 V + QA+ + G+ +V + L A + G L + N+ Sbjct: 150 SAVRLIQAMANDRTVDGF-EVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAK 208 Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI--RDGEGN 242 ++ + E D T AV ++P L GA +V+ GN Sbjct: 209 SVTLAERDLAPRDTLAVSIAEPK--LEPGASTTAFVVGASGETGN 251 >UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepID=C4NUW8_ECOLX Length = 458 Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 23/220 (10%) Query: 43 ISNTSPNLFTVPGDRI--IAVNSLDGALTNNEQTAS-----GGVVVATVNKKPFTFILET 95 +S + P++ + I +VN T+N Q V VAT + P T + T Sbjct: 225 LSKSGPSIMEAMLEAISGTSVNQPVTGATDNGQCGEVCIKENVVYVATDKQYPVTMFI-T 283 Query: 96 ERGL---NLSIQAVPREGAGRTIQLVSDLRG------TGEEAGAWETSTPYESLLVTISQ 146 E+G LS+ VPR R + L D +A WE S PY + ++ + Sbjct: 284 EKGSEAQALSLTMVPRRIPPREVFLKLDGGVGITGAFANTKAETWEQSQPYVETIRSVFR 343 Query: 147 AVRGGKLPAGWYQVPV---TKETLQAPAGLSSVADA--VWTGNHLKMVRFAVENKTLSAL 201 + G++P G+ + A G+ G+HL + N + + Sbjct: 344 KIALGEVPQGYTLNRIPAGAAVPSCAHPGVKVDFSKGQYMMGHHLNVFIGVALNVSDQPI 403 Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241 +E+ AV + P + L G + ++YV + + Sbjct: 404 EFKEALCGSWDVAAVT-TWPLNVLEPGQKTEIYVAKKQKR 442 >UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2 Length = 185 Score = 136 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 11/186 (5%) Query: 65 DGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT 124 +G L + T +G + V ++ P + +E G + P G I + Sbjct: 2 EGDLELQKDTTTGQLFVRSLTSNPTNLFVISEEGKTYLLVLKPTSKQGDNIVIDVAGANR 61 Query: 125 GEEAGAWETSTP---------YESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSS 175 E A + P Y + + ++ G +T+ Sbjct: 62 REAAVLASQTGPMPVTMNSTEYVRAIKKMMASMMRGTTGDMGINHSHEYQTVPLWKNTLF 121 Query: 176 VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235 + + +T ++ + F + N L IRE +F++ G AV L G DV++ Sbjct: 122 IQNGSYTAADMQGLSFTLTNLGTKQLEIREQEFYRQGVLAVAV--RKQILQPGEITDVFI 179 Query: 236 IRDGEG 241 I G Sbjct: 180 ISRPGG 185 >UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderiales RepID=A2SNK2_METPP Length = 305 Score = 136 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 83/222 (37%), Gaps = 15/222 (6%) Query: 28 PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVN-K 86 V+ + + +S++ N + P D +++ D QT + + + + Sbjct: 88 ANVIRVQSDRNEIAYVSSSMANRISTPFDAPRVIDTQDVEY----QTVGQSIYLLPKDPE 143 Query: 87 KPFTFILET--ERGLNLSIQAVPREGAGRTIQLVSDLR-----GTGEEAGAWETSTPYES 139 KP + +S+ VP+ +TI L D TG ++ + Y Sbjct: 144 KPVALYITGSNANDPVVSLTLVPKPIPQQTIVLQIDAPLAKGGVTGVDSEPAPVTDVYSE 203 Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199 L + + V K+P G+ + + P G+S ++G + R+ + Sbjct: 204 RLRYLLRQVALNKVPEGFAEGTLPNAAAVLP-GVSIHPMTRYSGPAYDIYRYRIRGTGDQ 262 Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241 + + E F+ G RAV F P + + G ++V+ D Sbjct: 263 -VELAEDAFYTEGVRAVAF-FPTAVIRKGEETTIFVVADKRA 302 >UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK n=1 Tax=Arsenophonus nasoniae RepID=D2U0R3_9ENTR Length = 340 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 81/269 (30%), Gaps = 43/269 (15%) Query: 14 FFSCSVMAANGTL---APTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTN 70 SVM N + V + +G I IS PN P + + ++ Sbjct: 61 PVPSSVMRNNNQQRLDSRMTVTIHSGENRLIPISVGQPNRIVTPFPEPVVLVIKKNSVKI 120 Query: 71 NEQTASGGVVVATVNKKPFTFILETERG--LNLSIQAVPREGAGRTIQLVSDL------- 121 +++ + + + K+P + + +S+ P + L+ Sbjct: 121 SKE--GNVIYITSYKKEPIAMYITNKGDESKAISLSLHPEQRPPVEATLLLAKEINTTNS 178 Query: 122 ---------------RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET 166 E+A WE S Y + + +A+ G LP G+ + Sbjct: 179 NYNNSMYYSPTNASQSANREKAERWEKSDTYAKTITKLLKAIALGDLPTGYEITDLKDTN 238 Query: 167 LQAPAGL------------SSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTR 214 + P L S G ++ N LS + + ES P Sbjct: 239 VSIPNCLFRTGGDQDNIKYSFKNGQYIAGARFSVIVGVASNTGLSTVLVDESLCTHPRLA 298 Query: 215 AVMFSQPASQLLAGARMDVY-VIRDGEGN 242 A + L + + Y VIR+ + Sbjct: 299 ARAL-WSNNTLAPNQKTEAYFVIRNDSAS 326 >UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas RepID=B7XGQ6_PSEPU Length = 346 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 30/243 (12%) Query: 19 VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGD--RIIAVNSLDGALTNNEQTAS 76 + A + V + +G I IS N P D ++ V++ D +++ Sbjct: 95 PVPAQPIESRQDVVVSSGTNTLIPISRGQMNRIVTPFDVPKVQTVSTADISVS------G 148 Query: 77 GGVVVATVNKKPFTFILE--TERGLNLSIQAVPREGAGRTIQLVSDLRGTGE-------- 126 + V T KP T + + + +S+ +P+ L+ G Sbjct: 149 NVLYVTTFEDKPVTMYVTPDDDETVAISLTLLPQGVPPIQANLILAKNVQGLASGLPVTS 208 Query: 127 ------EAGAWETSTPYESLLVTISQAVRGGKLPAGW-----YQVPVTKETLQAPAGLSS 175 +A WE S PY L ++ + + GKLP G+ Q Sbjct: 209 STNYSGQARKWERSQPYMDTLRSLMREMALGKLPRGYSFGALTNGNKIPACAQPSLSFDF 268 Query: 176 VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235 + G+ K+ EN + + + P AV + P L G + +V+V Sbjct: 269 SKSQLIEGHDFKVFVATAENVSARTVEFDHASCTHPHRAAVS-AWPDEVLEPGQKTEVFV 327 Query: 236 IRD 238 I Sbjct: 328 ITR 330 >UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betaproteobacteria RepID=A1W657_ACISJ Length = 335 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 26/234 (11%) Query: 17 CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTAS 76 C A + AP G + +I+++S N G + Sbjct: 116 CGGGAPAISAAPNTPSSTPGLASPASITSSSVN--------------PAGDVIVECDRDK 161 Query: 77 GGVVVATVNK--KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT----GEEAGA 130 G V + +P + + ++ + TI + G EA Sbjct: 162 GEVYIRPAGDALRPINLFVSSA-TATYTLLLRRSDTPADTIVIRDKTPQALRPGGPEAAP 220 Query: 131 WETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVR 190 + + + + A+ ++PA +V + +Q + G + Sbjct: 221 SGPAPSHVRAMKGLLVAMSSNRVPAD-VRVEEASKPVQLWTEARFTLLRRYEGRGYVGEK 279 Query: 191 FAVENKTLSALNIRESDFWQPGTRA----VMFSQPASQLLAGARMDVYVIRDGE 240 +A++N +L+ + + E +F +P +RA + L G VYVIR G Sbjct: 280 YALQNVSLAPMVLAEQEFDRPDSRAGGEITGIAIEHHNLRPGETTSVYVIRRGG 333 >UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=Enterobacteriaceae RepID=Q8KJZ3_PROVU Length = 388 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 82/253 (32%), Gaps = 36/253 (14%) Query: 20 MAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASG-G 78 + + + + + G I IS N P +R L + + G Sbjct: 125 LTDDVIPSRQDIIVEPGVNTLIPISMGQINRIVTPFERPT---IQRLQLDDVKVNVEGNA 181 Query: 79 VVVATVNKKPFTFILETERG--LNLSIQAVPREGAGRTIQLV-----------------S 119 V V T N +P + + +++S+ VP+ A L+ Sbjct: 182 VYVYTPNSRPVALYISEKGDESVSISVSLVPQRIAPVQATLMLSRKLNNAAVAGGGVSPI 241 Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179 G+ +A WE Y + I + V G +P G+ +T ++ Sbjct: 242 MYGGSEAKAKKWEQKDSYVETVRNILRTVALGDIPPGYALGNLTSSVSIPNCNFNTGTVQ 301 Query: 180 VWT-----------GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAG 228 + G+ ++ +N + + + ES P A + L G Sbjct: 302 DYIRYNFNGGQYINGSQFSVIVGIAQNTGPTTVTVDESLCTHPQMAARAL-WSRNTLAPG 360 Query: 229 ARMDVY-VIRDGE 240 + + Y V+R+G+ Sbjct: 361 QKTEAYFVLRNGQ 373 >UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ3_SYNAS Length = 284 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 77/228 (33%), Gaps = 12/228 (5%) Query: 23 NGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVA 82 A V ++ + +S++ N T G+ V S + +T V Sbjct: 48 TKLPAEGAVTVMPEVAQPVELSSSDVNRITCQGEIKDVVYSREKGITVKFSGRDAFVKFR 107 Query: 83 TVNKKPFTFILETE-------RGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETST 135 T K + T S+ A+P+ R+I+L + + + Sbjct: 108 TGLKDGKSTYSTTPSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKNRSLFGAL 167 Query: 136 PYESLLVTISQAVRGGKLPAGWY-QVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA-- 192 P+E +++ +++ ++P + P + L + AV G +++ + Sbjct: 168 PFEKKVLSAIRSLYTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGT 227 Query: 193 VENKTLSALNIRESDFWQP--GTRAVMFSQPASQLLAGARMDVYVIRD 238 + + + E DF + T + S L G + +V+ Sbjct: 228 LAGGDKDRIELGEKDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVES 275 >UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N903_9SPHN Length = 277 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 74/237 (31%), Gaps = 12/237 (5%) Query: 9 IFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLD--- 65 I + M A+ LA + + + G S+ ++ D+ V+ + Sbjct: 39 IAAVVGLVGLGMTASPALADQNLLVSDNGTVECVASSKDLTRISLKADKFANVSKVAAAS 98 Query: 66 --GALTNNEQTASGGVVVATVNKKP---FTFILETERGLNLSIQAVPREGAGRTIQLVSD 120 + + G + ++ P +F T +G + G V++ Sbjct: 99 ENEDFSVVFEPLRGDIYLSVPEGYPRKALSFFGTTVKGYVYKFSCNVQS-QGAEQIFVAN 157 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180 + + + + QA+ G+ + +Q L + Sbjct: 158 VDMEKAGQSEQVAGLSDKDRSIELIQAMYRQDALPGFEIRSQDRAPVQV-GSLKVQLVSE 216 Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 + G L+ + +EN + A+++ + AV + L G + +++ Sbjct: 217 YVGLELRGKQLLIENVSRKAVDVTDDTVASEDALAVSVTSAR--LEPGQKTTAFIVS 271 >UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfuromonadales RepID=A1AKM1_PELPD Length = 315 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 15/237 (6%) Query: 17 CSVMAANGTLAPTVVP--MVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74 +V +N A P ++ +I +S++ N P + + S + +T Sbjct: 30 TTVDTSNEKPAEGEFPTVVLPEAATAIRLSSSDINRIACPSEISEVLTSTEKGITVKITG 89 Query: 75 ASGGVVVA--------TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE 126 V + + P F + S+ A P+ +TI+L S L Sbjct: 90 KDAFVKFKVVKKGDKFSYSSTPTEFYVVC-GDKVFSMVAFPQRVPSQTIRLSSGLEKKIR 148 Query: 127 EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETL-QAPAGLSSVADAVWTGNH 185 E + + P+E ++ + V +P + K + L+ G Sbjct: 149 ENLSLYSGLPFEKKVLKAIREVYTENIPDSYTINKQEKRFITFKEILLTLKRTVDIEGEG 208 Query: 186 LKMVRFAVENKTLSA-LNIRESDFWQPGTR--AVMFSQPASQLLAGARMDVYVIRDG 239 L++ + + + + E F + + S L G ++V+ Sbjct: 209 LRIKEYEASLRGATPEFKMNEKMFLRAALAENPIAISLERHILRTGDSSRIFVVEQR 265 >UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylobacterales RepID=A7H3G5_CAMJD Length = 270 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 96/272 (35%), Gaps = 44/272 (16%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+K +I +L S S+ A N P + +I +SN+S N +P + Sbjct: 1 MKK----VILSALTLSTSLFAINVIDNP------SSDIININVSNSSVNRIVLPTQILDV 50 Query: 61 VNSLDGALTNNEQTASGGVVVAT-------------------------VNKKPFTFILET 95 S + + + K F + Sbjct: 51 AYSKEKGIDIKISGNQAFIKFLPIQKERVRSVGKDRYEPVGEPEIVYDKAKGSEVFFVTA 110 Query: 96 ERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPA 155 R S P+ T+ +++D +E +E+ PY S + I++++ G +P Sbjct: 111 NR--TYSFALNPKNMDAETV-IINDFSAQKDEILKYESDDPYMSTMGKITESILKGGVPQ 167 Query: 156 GWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF-----WQ 210 G+ +V + + + L + + G K V+NKT A+ + D+ Sbjct: 168 GY-KVKKINKVISSDKTLITRELTNYDGLLYKATLLEVKNKTDKAIRLNPKDYISIAKEA 226 Query: 211 PGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242 P ++ ++ + LL ++ + +I G N Sbjct: 227 PKAISIYYNNEVNHLLPYSKAQIIIITKGGRN 258 >UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT8_9SPHN Length = 255 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 77/257 (29%), Gaps = 31/257 (12%) Query: 4 NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN- 62 A+I L + + +SI +SN N G I V Sbjct: 10 APAALITACLPVPTF---------AQAIMALPDQTSSIRLSNRDINHLVCQGGEIEDVKF 60 Query: 63 SLDGALTNNEQTASGGVVV------------ATVNKKPFTFILETERGLNLSIQAVPREG 110 S + A+ + A V + P F + T G + A P + Sbjct: 61 SAEKAIAVEKAGADAWVKFLVKESDDAGQVTRSYVTAPSEFFV-TCNGAIYPLYAEPSDM 119 Query: 111 AGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAP 170 +T+ L G E V+I+ ++ ++P + + V+ L Sbjct: 120 PAQTVTLAPGASQRARANGELLGPLVEEERAVSITLSMLQDRVPPSFTDIAVSPRPLTLS 179 Query: 171 A----GLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF--WQPGTRAVMFSQPASQ 224 A ++ G L + +E S I E F G R + Sbjct: 180 AAPALRITERRRVAIEGTGLSASEYWIEASADSD--IDERLFLGTAMGARIFSVTLDRLS 237 Query: 225 LLAGARMDVYVIRDGEG 241 L AG + ++R GE Sbjct: 238 LRAGESARLILLRRGEA 254 >UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN25_9PROT Length = 243 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 14/223 (6%) Query: 29 TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGA----LTNNEQTASGGVVVATV 84 +V +GG + +S + D +V +G + + A+G + + Sbjct: 23 QIVEASDGGVVTGYVSASGITRLRFTSDAAASVQMAEGGEGAGFSIQHEPATGDLYLTLG 82 Query: 85 NK-------KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPY 137 +F + T G ++ + I++ + + A T Sbjct: 83 RLPRQGEAVGAASFFVTTRAGYTYQVELAAKATPSTQIEVRNPDLARRQTERALAE-TSL 141 Query: 138 ESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKT 197 + +V +++A+ L G+ +A L A + + L+ N + Sbjct: 142 DEEVVALTRAMWASALLDGYEIKRPVVRE-RAAGTLRLAVRATYESDALQGRVLIARNPS 200 Query: 198 LSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240 + I ES F PG AV P L GA + V ++ G+ Sbjct: 201 RGDVAIEESLFLAPGVAAVTIQGPR-VLGPGASVPVLIVDRGQ 242 >UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4M8_BURCH Length = 159 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 56/163 (34%), Gaps = 11/163 (6%) Query: 82 ATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLL 141 T + T + + G + VP +++ + + A + ++ + Sbjct: 5 PTALNESITVFVIDDAGTTYRLLLVPGPRPAEDVRIEPPAARSTQALQA----SAFQRRV 60 Query: 142 VTISQAVRGGK-LPA-GWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199 + A+ GG+ P + + + ++ + + N + + Sbjct: 61 KLMMLAMAGGRGAPQLSYTSLDTV---VPLWKEAVLTLVRQYSDGDFIGETYTLSNTSHT 117 Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242 + I E + + PG A+ L AGA VYV+R+ + Sbjct: 118 DMAIDERELYAPGVLAIAIENA--NLPAGASTIVYVVRERGDH 158 >UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1 Length = 424 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 33/252 (13%) Query: 19 VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGG 78 V A N V + GG + +S N + +V++ A + G Sbjct: 157 VEARNRYKEVQRVNVPPGGNVVLPVSRGLQNRISTSFKN-ASVSTSTPAEEASIFVNGGD 215 Query: 79 VVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQL-------VSDLRGTGEEAG 129 V ++T KP +L ++ ++ VP + G I + + R T + Sbjct: 216 VFISTNTDKPIGIMLSEDQVPESTYNLTLVPLDVPGAMISVTTSLSPSMQAKRETSLDKQ 275 Query: 130 AWE----------------TSTPYESLLVTISQAVRGGKLPAGWY----QVPVTKETLQA 169 +E ++ ++ + V G++P+G+ ++ + Q+ Sbjct: 276 NYEEMLARSQSEELAPSDPKQDDHKQRIIDLLTPVALGEVPSGFSLQQDRLSRIPASEQS 335 Query: 170 PAGLSSVAD--AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLA 227 P + A G+ + V+N + + G A A L Sbjct: 336 PCNFNMYAKLGQRLVGSRELIDVILVKNDKPYGQIVADQQCMAEGVIASALFDKAY-LQP 394 Query: 228 GARMDVYVIRDG 239 G ++Y++RD Sbjct: 395 GEETELYIVRDK 406 >UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA1_PARUW Length = 230 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 65/209 (31%), Gaps = 11/209 (5%) Query: 26 LAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG---ALTNNEQTASGGVVVA 82 A T + +S+T N + RI V + + ++ E T + Sbjct: 18 SAATYHTLNTTSLLPCYLSSTYQNRVMIENGRIKKVITPESDRLSIQIEELTGQAFIFAR 77 Query: 83 TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT-GEEAGAWETSTPYESLL 141 + K + + ++ G+ I E + L + A E + + Sbjct: 78 DPHLKEISLSVISDSGVIQDIHICFIERQPEVVVLQEPEQKECSPGVPAAEELS-----I 132 Query: 142 VTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSAL 201 + Q + G++P G+ ++ + G+ A + G+ + + + N Sbjct: 133 LKQVQEIVAGRIPTGYRHKSISSQKRTLKKGIELTLKAKFIGSENTLYLYQLANTGKQPQ 192 Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGAR 230 + E + ++ + + Sbjct: 193 TVLECEMGSQQSQ--WIYLEQNMIAPKQT 219 >UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW7_RHOS4 Length = 239 Score = 104 bits (259), Expect = 3e-21, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 68/233 (29%), Gaps = 35/233 (15%) Query: 28 PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKK 87 + G I+ S +V GDRI + + +G V + K Sbjct: 21 DQRLTTRPNGSVRISASAEEVTRISVAGDRIRRIIKDQTSFQEMNDETTGDVFLRYAGDK 80 Query: 88 ----PFTFILETERGLNLSIQAVPREGAGRTIQLVS-----------------DLRGTGE 126 P T + TERG+ +S + P G L+S + R G Sbjct: 81 AKLVPETGYILTERGVTISYELTPSARLGAETVLISVAGMPPEGATAGAAPAAEARSEGF 140 Query: 127 EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHL 186 E E Y S LV ++A + + + S V TG Sbjct: 141 ELAGGEGGGGYASGLVAFTRATI---------DKHIAGKAAPKRSHGSVVGSESGTGMRA 191 Query: 187 KMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239 K++ V +R DF+ V + L V V+ Sbjct: 192 KVI---VAAGGRGGRYVRPQDFYTSKVLGVWVQ--RNALGPSDHAWVVVVEKR 239 >UniRef50_C5SIK3 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK3_9CAUL Length = 236 Score = 96.0 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 11/211 (5%) Query: 36 GGQASIAISNTSPNLFTVPGDRIIAVNSLDGA----LTNNEQTASGGVVVAT---VNKKP 88 G QA + +S++ + + G+RI V ++ G L + +G V V + + Sbjct: 27 GDQALLQVSSSQMSRIHIQGERIATVRTIQGGDGAELLIEKDETTGDVYVGFDGDTSGQS 86 Query: 89 FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE-TSTPYESLLVTISQA 147 F+ L TE G + P + +T +L + + A + Y + + Sbjct: 87 FSAFLTTESGKTVQATFHPVDDTAKTFELKLEGTLSASSPAALQFKRNGYPETMAAFVKL 146 Query: 148 VRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESD 207 + P G + + +N + + Sbjct: 147 MFNPDRPDGVV-CRQGRAQPTQTTNFRVWTIERCDAEGIAGTVLHFKNISTVPQTLSADG 205 Query: 208 FWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 F AV + L G VY++ + Sbjct: 206 FLVRQVLAVGITDE--LLSPGEEARVYIVEE 234 >UniRef50_A0R7R1 Putative uncharacterized protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7R1_PELPD Length = 332 Score = 95.6 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 78/284 (27%), Gaps = 46/284 (16%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTV------------------------------ 30 MRKN+ + L A+ TV Sbjct: 1 MRKNSMYALIALLLIPSMTCASEAKFPKTVHREGKVGHKLVSLRETGNEGKADLKVDNTP 60 Query: 31 VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATV------ 84 V ++ + ++N N + V + + V V Sbjct: 61 VVVIPEVSTVVFMNNRDVNRIVCHEEIKDLVFLRENGIAAKVTGKDAFVNFKFVKEGDAM 120 Query: 85 --NKKPFTFILETERGLNLSIQAVPRE-GAGRTIQLVSDLRGTGEEAGAWETSTPYESLL 141 KP + ++ VP+ +T++L S L + P+E + Sbjct: 121 LHASKPSEMYVVC-GENTYNLIIVPKPDVPPQTVRLSSGLEKKIKANAEMYDGLPFEKKV 179 Query: 142 VTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA--VWTGNHLKMVRFA-VENKTL 198 + + V ++ + V K+ ++ + G L++ + + + Sbjct: 180 IKSIKDVYTDQIAESYSIEEVGKQIGN-WQEITIIHKKNVNVEGEGLRVKEYEAILKQGQ 238 Query: 199 SALNIRESDFWQPGTR--AVMFSQPASQLLAGARMDVYVIRDGE 240 + E F + V S L G + ++V+ + Sbjct: 239 VPFKLSEKIFTKKQFADNPVAISIEKHVLRPGETVRIFVVEQRQ 282 >UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUX3_PERMH Length = 252 Score = 94.8 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 20/211 (9%) Query: 7 AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66 ++ +LF A + G + +SN N+ P +++ S Sbjct: 5 KVLILALFIVSFSFAKE--------LVYEGKPLLLDVSNQVSNIIEFP-EKVKKAISASQ 55 Query: 67 ALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE 126 L+ Q V+V +K+P ++ T+ G ++ P+ + +++V + Sbjct: 56 QLSAKIQ--GNKVIVLLPSKEPADLLVSTKSGKVYALLLNPKIIPTQIVKIVDKQIEEEK 113 Query: 127 EAGAW-------ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179 + A E YE L+ I +A G+L +Y+V +TL+ Sbjct: 114 KKKAKKEKVKQIEKGKDYEEKLINILKAAINGQL-DDYYEVKRKVQTLETQNYF-IEITK 171 Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQ 210 + G+ ++ + K A I E Q Sbjct: 172 EYQGDEFGVLLGKIYPKKKDAKPITERLLAQ 202 >UniRef50_C9NP33 Type III secretion system outer membrane pore YscC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NP33_9VIBR Length = 686 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Query: 143 TISQAVRGGKLPAGWYQVPVTKETLQAPAGLS-SVADAVWTGNHLKMVRFAVENKTLSAL 201 +++ G +P G+ + + + + L+ D + G ++ + N + Sbjct: 571 DALRSLIKGYIPNGFEKGKLAEPHCRKDVILTKFAKDDQYIGPEFNIIAGTIYNPSSGRQ 630 Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238 E + G AV + P++ L G + +++V+ Sbjct: 631 RYDEKNCASQGVLAVS-AWPSTLLEPGEKAEIFVVTK 666 >UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersinia enterocolitica RepID=B0RL12_YEREN Length = 262 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 74/262 (28%), Gaps = 31/262 (11%) Query: 7 AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVP-GDRIIAVNSLD 65 ++ S +A + ++ ++ +SN N G+ + V S + Sbjct: 3 KLLLICALSLTSAVATAKVNNISTQRVLPEVSTTVTLSNRDVNRIVCESGEAVKPVFSKE 62 Query: 66 GALTNNEQTASGGVVVAT----------VNKKPFTFILETERGLNLSIQAVPREGAGRTI 115 + V +P L T + P+ A R + Sbjct: 63 KPMKVEIGADRKTFFVKFLFLQSAGGNQYYSEPTELYL-TCGNATFELIINPQHEAARKV 121 Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGK------LPAGWYQ---------V 160 L S T +E ++ E +S +V LP + Q Sbjct: 122 LLGSGTANTIKENQKLFSALSLEETATQLSISVMKDANDSGLGLPPTFEQQAINGSWEKA 181 Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF--WQPGTRAVMF 218 + + P L + G LK +F + L + + E F + G Sbjct: 182 SADRRGVAVPIELKKDREVNVEGTGLKATQFTIR--ALRNVQLSEMMFLNTRYGKNIFAI 239 Query: 219 SQPASQLLAGARMDVYVIRDGE 240 + + L +G + +I Sbjct: 240 TLESLSLSSGQMTSLVIIEREG 261 >UniRef50_A0L343 Putative periplasmic protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L343_SHESA Length = 405 Score = 73.2 bits (178), Expect = 7e-12, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 78/255 (30%), Gaps = 48/255 (18%) Query: 29 TVVPMVNGGQASIAISNTSPNLFTVPGD--RIIAVNSLDGALTNNEQTASGGVVVATV-N 85 V+ + GG ++ IS ++ N +I D AL G V V N Sbjct: 138 QVIALKAGGTTTLPISLSTTNRIATSFKNAKITTSVPSDAALVY---GEQGFVYVTPGVN 194 Query: 86 KKPFTFILETERG--LNLSIQAVPREGAGRTIQL-------------------VSDLRGT 124 I+E + +S+ VP ++L + Sbjct: 195 AGAIDLIVEEDGAPETAVSLYLVPLNVPPVLVELTVSYNASQRNAALQAVSIYSENEAKE 254 Query: 125 GEEAGAWET---------STPYESLLVTISQAVRGGKLPAGWY--QVPVTKETLQAPAGL 173 E A E + + ++T+ + V ++PAG+ + ++ P + Sbjct: 255 LESAKQAERERITNNQPVADSHVDDVMTLLEVVAKAEVPAGYELLEGDTIPAEVRYPCDI 314 Query: 174 SS------VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPG---TRAVMFSQPASQ 224 G+ L + V N + R+ PG AV + Sbjct: 315 RQMLPLYHEVKQRLIGSKLVVDIMEVRNDVNGLRSFRDEACMGPGREDVMAVGV-LDKAT 373 Query: 225 LLAGARMDVYVIRDG 239 L +VY++RD Sbjct: 374 LGPRESTEVYILRDR 388 >UniRef50_Q1MXI1 Putative uncharacterized protein (Fragment) n=1 Tax=Bermanella marisrubri RepID=Q1MXI1_9GAMM Length = 141 Score = 72.8 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 9/146 (6%) Query: 4 NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63 NN + S + + + +G I +S+ + R+ Sbjct: 2 NNIVVFLLVALISSTAF------SIQTYSVSDGDSIQIKVSSKDLTRIRMDSGRLDGAWG 55 Query: 64 LDGALTNNEQTASGGVVVATVNKKPFT--FILETERGLNLSIQAVPREGAGRTIQLVS-D 120 LD T+ + G + V P T F ++ G S+ AV T+ L S D Sbjct: 56 LDENFTHKADRSKGEIFVRPKPGAPTTSSFFIKDGNGSVYSVTAVQHAIPSDTVVLKSLD 115 Query: 121 LRGTGEEAGAWETSTPYESLLVTISQ 146 + + + ++ + + + Sbjct: 116 YTAKRDSSQSSRKASSDVKRIKRLVK 141 >UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enterobacteriaceae RepID=Q2VP23_ECOLX Length = 198 Score = 72.5 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60 M+ N A++ G+ S + +P + GQ ++ISNT PN+ +PGD++ A Sbjct: 1 MKNNFPALLLGTALMITSPVTVY-AQSPATLSFPQRGQFRLSISNTDPNMIFIPGDKVTA 59 Query: 61 VNSLDGALTNNEQTASGGVVVATVNK 86 + + +G L + T++GGV+ +V Sbjct: 60 ITAQNGMLADKRLTSAGGVLFTSVAN 85 >UniRef50_C1SHE4 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE4_9BACT Length = 237 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 25/227 (11%) Query: 29 TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVA------ 82 + +I +S + N P S + +T + + Sbjct: 18 ATTGIEPEVVTTIEMSRSDMNRIVCPYPITDFATSKENNMTYKISGNNLFIKFPVIAVTK 77 Query: 83 ---TVNKKPFTFILE---TERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTP 136 + KK F E S+ + T+ L SD G ++A + S Sbjct: 78 DGELIEKKYFNGYAEVHLVCGDAVYSLILQAEQKKTETVYL-SDTAGKMKKANEYVRSKS 136 Query: 137 YESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENK 196 YE L+ QA+ K +Y ++ G+ V G + +E Sbjct: 137 YEDLITEFIQALIENKPLNDFYMDESDEKETYR--GIDISVSRVMVGGGYVVKELILE-- 192 Query: 197 TLSALNIRESDFWQ----PGTRAVMFSQPASQLLAGARMDVYVIRDG 239 + +++ +++ + +AV P YV++ Sbjct: 193 SKEKVSLTDTELLKLRMLSNVKAVALLSPTFA----GITKAYVVQGK 235 >UniRef50_C6CGU4 Type III secretion outer membrane pore, YscC/HrcC family n=19 Tax=Gammaproteobacteria RepID=C6CGU4_DICZE Length = 691 Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 12/104 (11%) Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNH--------LKMVRF 191 + + + G+ PAG+ + + + + L + Sbjct: 574 TVENALRDLASGQTPAGFT---IDGSGPTLSEICRTSPSMSYQSHRHQWYSNLSLSLTVG 630 Query: 192 AVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235 V+N L E+ T AV + P + L G +VY+ Sbjct: 631 VVKNTGTQPLRFDEASCANSRTLAVA-AWPKTTLAPGESTEVYL 673 >UniRef50_Q5ZWU3 Putative uncharacterized protein n=8 Tax=Legionella RepID=Q5ZWU3_LEGPH Length = 278 Score = 53.6 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 83/259 (32%), Gaps = 32/259 (12%) Query: 2 RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPN--LFTVPGDRII 59 R+N +I L ++ + + +I + N V + I Sbjct: 17 RRNPMKLIKHMLLIIGFMLTQVSYALQSEHLVWEKVPLTIEL---PINKERL-VQFPQAI 72 Query: 60 AVNSLDGALTNNEQTASGGVVVA---TVNKKPFTFILETERGLNL-SIQAVPREGAGRTI 115 + + + G + + T N L E + + +++A + I Sbjct: 73 KIIDQQLSTNLDILKVKGSLYLKAKDTFNDARLIAQLLPEGEVIILNLKANEKAVNTTPI 132 Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGG--------KLPAGWYQVP-VTKET 166 +++ D ++ A + YE + +++ +P G Y+ P T +T Sbjct: 133 EILIDDPKVTHQSSASQ----YEYNAIQLTRFAIQALYSPERVRDIPEGIYRSPMQTNKT 188 Query: 167 LQAPAGLSS--VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQ-PGTRAVMFSQPAS 223 + G S A W G L + ++N + + F + G P S Sbjct: 189 IPLFYGASIEAHPLASWRGGSLYVTAVDLKNLLNQPVKL---QFSKLMGHWQTASFYPKS 245 Query: 224 QLLA---GARMDVYVIRDG 239 +L V+V+ D Sbjct: 246 ELPPRNQHESTTVFVVSDQ 264 >UniRef50_A4V6Q8 Putative exported protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V6Q8_PSEFS Length = 264 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 73/253 (28%), Gaps = 24/253 (9%) Query: 1 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNL-FTVPGDRII 59 M+K A + F+ V A + + ISN + P ++ Sbjct: 1 MKKTILAAMVAVA-FASPVFADEECNRSPRSVIYENSPVDVYISNDNQRAEVVFPETYLL 59 Query: 60 AVN-SLDGALTNNEQTASGGVVVATVNKKPFTFI-LETERGLNLSIQAVPREGAGRTIQL 117 VN L + T + + + ++ G + + + R G ++ Sbjct: 60 GVNREQPVGLELFPTPIKNKLAFNTTDGQYVGLVTVDGPSGQSYQVNLIARPGCADSLVT 119 Query: 118 VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTK-----ETLQAPAG 172 +S A + + + + G +P G+ + +K + Sbjct: 120 ISHQAPVDRSQLAKDGK----GRVKGLMNYLFDGTVPNGYRKNSFSKLTKEQRVVFRQGS 175 Query: 173 LSSVADAVWTGNHLKMVRFAVENKTLSA--LNIRESDFWQPGT-------RAVMFSQPAS 223 + + G + V N+ +A L I + D+ R V + Sbjct: 176 VEFSLQSQVIGPTYVGTTYEVVNRGRTAFKLAIDQIDYSNKAVVDSIGTARQVAMLPTSH 235 Query: 224 QLLAGAR--MDVY 234 L +VY Sbjct: 236 ILGPSPEYITEVY 248 >UniRef50_Q93PY6 RscC n=2 Tax=Pseudomonas fluorescens RepID=Q93PY6_PSEFL Length = 713 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 139 SLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-----LSSVADAVWTGNHLKMVRFAV 193 S ++T + G++P + + + L++ + G + + Sbjct: 586 SDIITTLARLVSGEVPKAFNAARMPLGLNTLCSTRDLLALNTERSQWYAGPDYNVAVVVL 645 Query: 194 ENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235 N+ + I E + T AV P + L G +V++ Sbjct: 646 RNQFKRNVRIDEKECSNSQTLAVTV-WPRAWLKPGEEAEVFI 686 >UniRef50_Q01723 Hypersensitivity response secretion protein hrpH n=16 Tax=Pseudomonas RepID=HRPH_PSESY Length = 701 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 32/126 (25%), Gaps = 7/126 (5%) Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTK----ETLQAPAGLSS 175 D + + P + + + G P G + GLS Sbjct: 557 DDQMKRIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLPFETDSLCDPGQGLSL 616 Query: 176 --VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDV 233 + + N T + I ES V + P + L G +V Sbjct: 617 DGQRSQWYARKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGVA-AWPHAWLQPGEESEV 675 Query: 234 YVIRDG 239 Y+ Sbjct: 676 YIAVRQ 681 >UniRef50_Q1MY42 Putative uncharacterized protein (Fragment) n=1 Tax=Bermanella marisrubri RepID=Q1MY42_9GAMM Length = 65 Score = 42.0 bits (97), Expect = 0.019, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 22/63 (34%) Query: 178 DAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237 + G + +A+ N ES+F G +++ +YV+R Sbjct: 3 VDSYVGRDFEGEVYAIRNSDEKDHVFHESEFRNFGEHVRFAGLDKLKIVPNETTTLYVVR 62 Query: 238 DGE 240 + + Sbjct: 63 EAK 65 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.307 0.129 0.307 Lambda K H 0.267 0.0396 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,015,390,632 Number of Sequences: 3077464 Number of extensions: 31598798 Number of successful extensions: 105541 Number of sequences better than 1.0e-01: 67 Number of HSP's better than 0.1 without gapping: 86 Number of HSP's successfully gapped in prelim test: 55 Number of HSP's that attempted gapping in prelim test: 105195 Number of HSP's gapped (non-prelim): 153 length of query: 242 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 117 effective length of database: 655,713,356 effective search space: 76718462652 effective search space used: 76718462652 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 91 (39.7 bits)