BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (242 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae Rep...   486   e-136
UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=...   204   2e-51
UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK...   161   2e-38
UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID...   154   2e-36
UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp...   152   6e-36
UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638...   120   6e-26
UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serrati...   111   2e-23
UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK...   108   1e-22
UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=...    97   4e-19
UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenopho...    83   9e-15
UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly...    60   7e-08
UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK...    57   7e-07
UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkhol...    51   3e-05
UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK...    50   9e-05
UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9...    49   1e-04
UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enter...    49   1e-04
UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrio...    48   3e-04
UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 T...    45   0.003
UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovo...    40   0.094

>UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae RepID=TRAK2_ECOLX
          Length = 242

 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/242 (98%), Positives = 240/242 (99%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           MRKNNTAIIFG LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA
Sbjct: 1   MRKNNTAIIFGGLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD
Sbjct: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
           LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD+V
Sbjct: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADSV 180

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
           WTGNHLKMVRF VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE
Sbjct: 181 WTGNHLKMVRFVVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240

Query: 241 GN 242
           GN
Sbjct: 241 GN 242


>UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=Q4LC34_SODGL
          Length = 206

 Score =  204 bits (519), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 136/200 (68%)

Query: 41  IAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLN 100
           + +SNT PNLF+VPGD ++AV+ +D +L     TA+G ++++T+NKKPFTF++ET RGLN
Sbjct: 1   MVLSNTEPNLFSVPGDSVVAVSGIDESLVRYAPTANGALMLSTLNKKPFTFVIETARGLN 60

Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQV 160
            S++AVP+ G+GRT  LV + +G    A  WE S PYES+LV ++QA+  G+LPAG+ + 
Sbjct: 61  FSLRAVPQAGSGRTFSLVGEGQGVSVAAKVWEQSVPYESMLVALNQALMAGRLPAGYGKA 120

Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQ 220
           P T E L  PAGL + A  VW G+ LK+VRF V N   + + + E DFWQPG  AVMF  
Sbjct: 121 PATHERLPLPAGLWAEALWVWKGHRLKVVRFRVTNPGTTPVRVNEPDFWQPGVWAVMFDT 180

Query: 221 PASQLLAGARMDVYVIRDGE 240
           P  +++   RM V+V   GE
Sbjct: 181 PTREIVPAGRMGVWVTLSGE 200


>UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK n=4
           Tax=Enterobacteriaceae RepID=B5PME8_SALET
          Length = 246

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 2/242 (0%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+ N  A +FG+        AA    +P  + +  GGQ  ++ISNT PN+  +PGD++ A
Sbjct: 1   MKNNLPAFLFGTAMMVVMPPAAQAQ-SPATISLPQGGQFRLSISNTDPNMIFIPGDKVTA 59

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           + +  G L +   T +GGV+  +V  + FT  +ET  G   S+ A P +G GR  +L+S 
Sbjct: 60  ITAPGGMLADKRLTTAGGVLFTSVATRTFTIFVETALGQTFSVVATPVKGEGRVYRLMSA 119

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
              +  E   WET+  YE LL+++++AV  G +P G+ +V    + ++ P G S      
Sbjct: 120 EPPSRPETRKWETAQAYEKLLISLNRAVLTGDIPDGYGEVKPLSDGIRLPGGFSVTPLKA 179

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR-DG 239
           W G+ L+  R+ + N       +RE DFW+PG RAVMF   A  L+ G RM V VIR +G
Sbjct: 180 WAGDQLRADRYELRNANTWGGALREQDFWKPGVRAVMFDNNAQALMGGGRMTVTVIRGNG 239

Query: 240 EG 241
           EG
Sbjct: 240 EG 241


>UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF3_ECOSE
          Length = 259

 Score =  154 bits (390), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 15  FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTN---- 70
            +C V AA     P  VP+    QA IA+SNT PNL  VPGDRI+AV+S  G  TN    
Sbjct: 23  LACGVQAAPSAQLPVRVPVSPDAQARIALSNTQPNLLVVPGDRIVAVDSAQGTFTNAGDY 82

Query: 71  -NEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAG 129
                A+GGVV+ T    PFTF + TE GL +S+   P+   GR + L+SD     + A 
Sbjct: 83  GQTGMANGGVVLMTEKTTPFTFYVRTEGGLVVSVIGQPQARDGRVVHLMSDQPVRQKAAA 142

Query: 130 AWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKE-TLQAPAGLSSVADAVWTGNHLKM 188
            WE S  Y +LLV + +A+  G++P G+   PV  E     PAGL+  A+ +W+G+ L++
Sbjct: 143 PWERSHDYVALLVDVQKALLRGEVPPGYVASPVVGEPVFSLPAGLTLRAEHMWSGDALRV 202

Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
            R+ V N+   A  + E  F  PG R+V+ S  A  LL GA  +V+V  + E
Sbjct: 203 YRYRVSNRQSEARALPERLFSAPGVRSVLISPWAETLLPGASAEVWVTVEQE 254


>UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
           RepID=A4SUD0_AERS4
          Length = 242

 Score =  152 bits (385), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 5/205 (2%)

Query: 36  GGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILET 95
           GG   + ISN +PNL  VPGDR+  ++S  G LT+ + T +G  + +T + KPFT  +ET
Sbjct: 37  GGHLDLPISNVNPNLIVVPGDRVTNISSAAGLLTDKKNTQAGAALFSTASDKPFTLYVET 96

Query: 96  ERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPA 155
             G   SI A PR   GR+ +L          A  WET+ PYES+LV +++A     LP 
Sbjct: 97  RLGQVFSINATPRATEGRSYRLFPTTPTPRPVAKVWETAQPYESMLVALNRA-----LPE 151

Query: 156 GWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRA 215
           G+    + KE     AGL +  D+ W GN L +VR+ + N     + +RE DFW PGTRA
Sbjct: 152 GYGPASIDKEAPFTRAGLQATPDSAWDGNALHIVRYRLTNPLSVPVVLREPDFWMPGTRA 211

Query: 216 VMFSQPASQLLAGARMDVYVIRDGE 240
           +M      +L+AGA   +YVIR  E
Sbjct: 212 IMVHPRYQRLIAGASTWLYVIRTQE 236


>UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS3_ENT38
          Length = 246

 Score =  120 bits (300), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 127/238 (53%), Gaps = 9/238 (3%)

Query: 7   AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66
           A++  S  F+  + AA    AP  +P  N    ++ +SNT+P    V G+ I +++   G
Sbjct: 11  AVLLASGIFTSGLRAAT---APAAIPFENDAAFNVTLSNTNPTKVVVDGELITSISGPTG 67

Query: 67  ALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQL--VSDLRGT 124
           A  +   T  G ++++ +  + FT  ++T+ G +LS+   P+ G G+T++   +S     
Sbjct: 68  AY-DQSTTDDGALILSPLVGQNFTLFIQTDHGSSLSLNVRPQAGNGKTLRFTPMSPPLRK 126

Query: 125 GEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVWTG 183
            ++A AWE    YE  LV +S+AV  G++P  + + PV++ T   P+  +    +  + G
Sbjct: 127 NDDAKAWEEGQTYEKTLVALSRAVVNGQVPDDYVEYPVSRMTAYTPSTPVRLTPERQFVG 186

Query: 184 NHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241
           NHL++VRF + N      ++RE DFW  G RAVM SQ  +QL AG     +V+   +G
Sbjct: 187 NHLRIVRFRMNNPGSITQSLRERDFWLKGVRAVMLSQ--NQLYAGGEGYAWVVFSDDG 242


>UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13
           RepID=D1S163_SEROD
          Length = 245

 Score =  111 bits (278), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 1   MRKNNTAIIFGSL-FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII 59
           MR     I+ G L  FS SV A+        V   N  Q  + +S+T+PN   V G+ I 
Sbjct: 1   MRLAAPVIVLGILSAFSVSVAASAANRDAKSVYFTNEDQLPVTLSSTNPNKIIVEGELIT 60

Query: 60  AVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV- 118
            +    G       T  G +++A  +   FT  ++T+RG ++S+      G GRT +L+ 
Sbjct: 61  NIYG-PGNAYEERNTDDGALMIALNSAATFTLYVQTDRGSSVSLNVTAVSGPGRTYELIP 119

Query: 119 -SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSV 176
            S  +   E+A AWE S PY   L++I+QAV  G +P  + + PV++    AP  GL   
Sbjct: 120 RSLPKIDNEDAKAWEESQPYVDTLMSIAQAVVNGDVPPDFVEYPVSRAAAYAPPIGLQFF 179

Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
           A+  W G+HL++ R+ ++N +  ++  +E  F+ PG R +  S     L  G +  V+VI
Sbjct: 180 AEKQWIGSHLRVTRYRMKNLSNLSMAFKERQFYVPGVRGISLS--TQSLFPGGQGYVWVI 237

Query: 237 R--DGE 240
              DGE
Sbjct: 238 SRFDGE 243


>UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK n=2 Tax=Pantoea
           sp. At-9b RepID=C8QE99_9ENTR
          Length = 245

 Score =  108 bits (270), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 8/212 (3%)

Query: 35  NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILE 94
           N       +SNTSPN   + G+ I AV   +GA T  + TA G +++  +  + FT  +E
Sbjct: 35  NNAHLKAQMSNTSPNKIVIDGELITAVTGPEGAYTK-DSTADGALLITPLTGQDFTLFIE 93

Query: 95  TERGLNLSIQAVPREGAGRTIQLV-SDLR-GTGEEAGAWETSTPYESLLVTISQAVRGGK 152
           T  G+++S+   P+ G+GRT++L+ +D+      +A AWE S P++  LV++++ V  G 
Sbjct: 94  TAGGVSVSLDVSPKPGSGRTLELIPADVPLKPNPDAKAWEESQPFQKTLVSVARTVANGG 153

Query: 153 LPAGWYQVPVTK-ETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQP 211
           +P G+  +  ++      PAG+    +    G+HL+++R+ ++N       + E  FWQ 
Sbjct: 154 VPDGYTDMKASRAPAYNPPAGVLLTPERQLAGSHLRVMRYRMKNTGYVTRTLSEKQFWQQ 213

Query: 212 GTRAVMFSQPASQLLAGARMDVYVI--RDGEG 241
           G RAVM S     L A     V+VI   D EG
Sbjct: 214 GVRAVMLS--TRTLYANGEGYVWVIFSTDKEG 243


>UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB08_ERWT9
          Length = 248

 Score = 97.4 bits (241), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 8/206 (3%)

Query: 38  QASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVV-VATVNKKPFTFILETE 96
           Q + A S  SPN   V G++I  ++   GA  + +Q   G ++ +A    + FT  + T+
Sbjct: 38  QVNAAFSQVSPNRIIVQGEKITDISGPGGAFDSQKQPDGGALISLAPGVSQSFTLFVVTD 97

Query: 97  RGLNLSIQAVPREGAGRTIQLV---SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKL 153
           +   LSI+ +P+   G+T+  V   + ++   EE  +WE    YE  LV IS+++  G +
Sbjct: 98  KNSALSIEIIPKSIPGKTLSFVPQTAPMKVKPEEK-SWEEGQSYEKTLVDISKSIINGVI 156

Query: 154 PAGWYQVPVTKETLQAPA-GLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPG 212
           P  + + PV++    +PA G++  AD  + G H+++VR+ + N +    ++ E  F+ PG
Sbjct: 157 PQDFSEYPVSRVQAYSPAVGVTLRADKHFIGPHMRIVRYIMNNPSYLNQDLTEKQFYAPG 216

Query: 213 TRAVMFSQPASQLLAGARMDVYVIRD 238
            RAVM S     L +      YVI D
Sbjct: 217 VRAVMLS--TRNLYSHGEGYAYVIFD 240


>UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenophonus nasoniae
           RepID=D2U002_9ENTR
          Length = 227

 Score = 82.8 bits (203), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 11/228 (4%)

Query: 13  LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE 72
           +  S S+ A N T+ P  V         +++SN  PN+  V  DRI+  NS  G L + +
Sbjct: 1   MLISTSIWAENLTVTPHSV-------VRLSVSNREPNVIAVMNDRIVEANSAAGKLADKK 53

Query: 73  QTASGGVVVATVNKKPFTFILETERGLNLSIQAVP-REGAGRTIQLVSDLRGTGEEAGAW 131
            T SG ++  T    PF+  +ETE+G   ++ A+P ++  G  + +++        A  W
Sbjct: 54  ATDSGALIFTTEETTPFSLYIETEKGFGFTVNAIPVKKSQGINVSVMNAEAKADSSAQEW 113

Query: 132 -ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLS-SVADAV-WTGNHLKM 188
            +TS  Y   +     A     +P G+ +         A A  +    D+V + G ++++
Sbjct: 114 GKTSDSYSQFITRTFTAAMNDNIPTGFVKNGRVNVNWSASALANFRFRDSVSFQGKNIRL 173

Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
           +R  VENKT   + + E  FW   T A+ F+   + L    ++ ++++
Sbjct: 174 LRVNVENKTSQPIQLNERVFWVLQTMAIAFNPTVNTLRPHEQVTLFLL 221


>UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly protein TraK n=2
           Tax=Photobacterium damselae subsp. damselae CIP 102761
           RepID=D0Z4T4_LISDA
          Length = 243

 Score = 60.1 bits (144), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 20/232 (8%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M K    +   +L F+ +V+A     AP  V   +    S+ +S+   N   V  D+I +
Sbjct: 1   MSKYPAVLGLCALIFAPTVLAT----APNTVLFSDNETVSVNLSSLDINRLVVKDDKITS 56

Query: 61  V-----------NSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109
           V           N +D + T       G  +++    +PFT  + TE+G +  +   P  
Sbjct: 57  VTCPTGFCTMPANPVDESGTGAPVDPQGAGLISLNVLEPFTLYITTEKGRSFGVFVRPLA 116

Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGW--YQVPVTKETL 167
               T   +S  R T ++A  +E  +PY   L  +   +    +P G+   ++ V K   
Sbjct: 117 VPAITTVFLSTERDT-QKAQEFEKQSPYTQTLAALISHMIKETIPEGFAFQRLTVKKPIE 175

Query: 168 QAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFS 219
           QA   L+ +A   + G HL  +   + NKT   + +  + F++ G +AV FS
Sbjct: 176 QAKLLLTPIAS--YQGEHLTGISVKISNKTAQYIQVEPTSFYKAGVKAVSFS 225


>UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK n=6 Tax=Shewanella
           baltica RepID=A6WUR6_SHEB8
          Length = 272

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 49/279 (17%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+  N  +      F  SV+AAN    P      +     I +S+   N   V GD+I +
Sbjct: 1   MKIANPLVFAACALFPMSVLAAN--TPPKHYGFNDSETVPIELSSVDINRLVVEGDKITS 58

Query: 61  VNSLDG--ALTNNEQTASGGVVVATVNKKPFTFILETER----GLNLSIQAVPREGAGRT 114
           ++  +G   +T  +   SG   V      PFT  + TE+    GL +S +A+P   A  +
Sbjct: 59  IDCPEGFCVVTGTKSDKSGAARVNLNLAMPFTAYVSTEKGRHFGLFISPKAIP---AVTS 115

Query: 115 IQLVSDLRGTGEEAGAWETSTPYESLLVTIS-QAVR---GGKLPAGWYQVPVTKETLQ-- 168
           I      R   E+   ++  TPY +++   + Q +R    GK P   Y+V V  + L+  
Sbjct: 116 IFTAEHYR--EEQPSVFDKKTPYPTMMTEFTAQMIRYLATGK-PIDGYRVHVVNDDLERT 172

Query: 169 ---------------------------APAGLSSVADAVWTGNHLKMVRFAVENKTLSAL 201
                                       PAGL++    V+TG H   + + V N     +
Sbjct: 173 TVDSEPRGTETSIDDAMFTRLNEQQMPKPAGLTTEPAFVFTGKHFNGIIYRVTNHAALPV 232

Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
            +  + F+ P TRA   S    +L       ++V+  GE
Sbjct: 233 TLTTAQFYSPTTRAAALS--TYELAPKQTGHLFVVSGGE 269


>UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkholderia multivorans
           ATCC 17616 RepID=B3DCS7_BURM1
          Length = 319

 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 13/208 (6%)

Query: 35  NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVN---KKPFTF 91
           N G  ++ +S   PN   +P      V++ D  +   EQ  S  V V   N   +    +
Sbjct: 112 NTGNKTVYLSADEPNRILLPFKNAYIVHTSDVQVDKREQ--SNNVYVYWTNAPSQARHLY 169

Query: 92  ILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTP---YESLLVTISQAV 148
           I   + G  L +  VP++   +TI +  D   TG  +G    S+P   Y S +  +  A+
Sbjct: 170 IEPPDGGSALGLAIVPKKIPAQTILVTDD---TGIVSGRRPKSSPGSEYTSHIQDLMAAI 226

Query: 149 RGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF 208
             GK P G+ QV +    + A  GLS+  D  ++     +  + V N T S   +RE +F
Sbjct: 227 ALGKAPDGFSQVDIQLPPI-AMNGLSATVDTRYSSQEGDLYVYTVRNPTQSRAVLREEEF 285

Query: 209 WQPGTRAVMFSQPASQLLAGARMDVYVI 236
             P   AV    P   LL G +  V V+
Sbjct: 286 DGPEVIAVSI-YPKPVLLPGEKTRVIVM 312


>UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK n=2 Tax=Legionella
           RepID=D1RMP1_LEGLO
          Length = 239

 Score = 49.7 bits (117), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 11/215 (5%)

Query: 15  FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGAL-----T 69
           F+ S+ A N T+A   +    G + ++++S+ + N   V G+RI+ V+  + +       
Sbjct: 13  FATSLHAGN-TVA--TLKFEEGERFALSLSSLNFNRIDVEGERIVKVSFPEHSFIIEQSK 69

Query: 70  NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAG 129
            +E    G VV+  +   P T    T    + S    P E  G+TI+LVS      + A 
Sbjct: 70  ESEDDLDGAVVLKPLAHIPLTVYFTTNLNHHFSATVSPTEDLGKTIKLVSKKLKGFDYAK 129

Query: 130 AWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMV 189
           A E S   +S L+T   A+  G  P+G+ +V +   T +    L         G      
Sbjct: 130 AQEQSQYQQSDLMT---ALMEGTTPSGFQEVGIKPTTFRLHKHLKVTLVKQVRGKESSGY 186

Query: 190 RFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQ 224
            + +EN++   + +  S F  P    +  S+   Q
Sbjct: 187 VYRIENQSNKPMELTASLFEHPKLMTMELSEKMLQ 221


>UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9_9GAMM
          Length = 239

 Score = 49.3 bits (116), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 28/224 (12%)

Query: 14  FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV----NSLDGALT 69
             S   M AN       +P+      ++ +S  + N   V  D+II      NS+  A+ 
Sbjct: 11  LISTMTMGANS------IPVKENSDIALTLSQNNYNRIVVKNDKIIEAVFPPNSM--AIK 62

Query: 70  NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAG 129
            +EQ  S  V+++  N  PFT  + TE+G + S+     E  G+TI+LVS  +    +  
Sbjct: 63  RDEQDGSVYVMLSATN--PFTLFVTTEKGTHFSVTLNGEESLGKTIELVSPPQ---PKVV 117

Query: 130 AWETSTPYESLLVTISQAVRGGKL--------PAGWYQVPVTKETLQA---PAGLSSVAD 178
           A + +T  +++     +AV    L           +  V + ++  +A     GL+ +  
Sbjct: 118 ASQANTTKDNMKTITQEAVPEAILALLTHMEQHKPFADVRIKRQFGKAQRWSKGLTLLPK 177

Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPA 222
             W G  LK     + N+    L + +  F + GT A+ FS+P+
Sbjct: 178 ESWDGKLLKGETIELYNRGKEPLELSQEWFAKVGTLAIKFSKPS 221


>UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enterobacteriaceae
          RepID=Q2VP23_ECOLX
          Length = 198

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 1  MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
          M+ N  A++ G+     S +      +P  +     GQ  ++ISNT PN+  +PGD++ A
Sbjct: 1  MKNNFPALLLGTALMITSPVTVYAQ-SPATLSFPQRGQFRLSISNTDPNMIFIPGDKVTA 59

Query: 61 VNSLDGALTNNEQTASGGVVVATV 84
          + + +G L +   T++GGV+  +V
Sbjct: 60 ITAQNGMLADKRLTSAGGVLFTSV 83


>UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrionales
           RepID=B6ESX6_ALISL
          Length = 251

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 16/224 (7%)

Query: 26  LAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTN--NEQTASGGVVVAT 83
           L     P  +     I +S+ + N   V  D+II ++   G  T+  N+Q ASG + +  
Sbjct: 29  LPSNTYPFNDNDTVPIVLSSLNINRLVVRDDKIIGLDCPTGFCTSKGNKQDASGSITLRL 88

Query: 84  VNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTG---EEAGAWETSTPYESL 140
               PFT  + T+ G N ++   PR        LVS+  GT    +E   +     Y + 
Sbjct: 89  NIALPFTAQVTTKNGRNFTLFITPRAIPA----LVSEFIGTANTRQEKSVFTRDFDYPTA 144

Query: 141 LVTISQAV----RGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVWTGNHLKMVRFAVEN 195
           L   ++++      G L  G+    V   TL      L+ +   V+ G     + + V N
Sbjct: 145 LTQFTKSMMLWSERGFLIDGFSLHHVDPSTLPKDTNPLAIIPQTVFVGKEYSGIIYRVLN 204

Query: 196 KTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239
           ++   + +  S F+   TR+   ++    LL    M +Y++  G
Sbjct: 205 QSSGQVTLSTSQFYSYSTRSAAITK--DTLLPNEDMTLYIVTGG 246


>UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 Tax=Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1
           RepID=Q5ZTS1_LEGPH
          Length = 237

 Score = 44.7 bits (104), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 4/135 (2%)

Query: 87  KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQ 146
           + FT  L TE+GL  +++  P+  A +TI +    R     A A  TS+ YE ++V   +
Sbjct: 91  RAFTINLLTEKGLFYNVRVEPKPIASQTI-VFKSYRNPVIRARAPHTSS-YEKVMVGFLR 148

Query: 147 AVRGGKLPAGWYQ-VPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRE 205
           A+  G LP G+ Q +P      +A          V  GN ++   F ++N T   ++ +E
Sbjct: 149 ALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRLLTV-NGNRMRGEIFELKNVTNQPIDAKE 207

Query: 206 SDFWQPGTRAVMFSQ 220
           S F  PGT+ V  ++
Sbjct: 208 SWFNWPGTKGVALAK 222


>UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42
           RepID=A1WDF8_ACISJ
          Length = 245

 Score = 39.7 bits (91), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 94/241 (39%), Gaps = 13/241 (5%)

Query: 10  FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII-AVNSLDGAL 68
             ++    S++A     A  VV   + G   + IS    N   + G RI   V S+ G L
Sbjct: 9   LSAILLLTSLLATEAG-ATQVVENADRGHVQVNISVNETNRLAIDGRRIANVVPSVKGVL 67

Query: 69  TNNEQTASGGVVVATVNKKP----FTFILETERGLNLSIQAVPREGAGRTIQLV--SDLR 122
              +  A G       ++ P     T  +  E+G+   +  VPR  AG  I +   S+  
Sbjct: 68  AGQKDEALGAYYFTLASESPNQGTVTVFVSDEKGVTYKLILVPRPVAGEEIIIRPPSEKA 127

Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET-LQAPAGLSSVADAVW 181
                A A   +  Y+  +  +   +   +L      + V KE  L     L  VA   +
Sbjct: 128 TPSSRAAADGRTVSYQRRIKDLMLVMADDELKDSVETIQVNKEVPLWKEGRLILVAK--Y 185

Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241
               +   ++ + N + S + + E + ++ G RA+        L+ G   D+Y++R+ + 
Sbjct: 186 MDGEVVGEKYRLTNVSPSEMLLVEQELYRRGVRAIAVEH--HTLMQGDGTDIYIVRERKD 243

Query: 242 N 242
           N
Sbjct: 244 N 244


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae Rep...   307   1e-82
UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK...   262   9e-69
UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serrati...   250   4e-65
UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638...   246   5e-64
UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID...   236   5e-61
UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=...   234   2e-60
UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp...   232   9e-60
UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=...   221   2e-56
UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK...   220   5e-56
UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK...   205   9e-52
UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK...   197   2e-49
UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrio...   195   1e-48
UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenopho...   191   1e-47
UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly...   190   3e-47
UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9...   173   7e-42
UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkhol...   163   6e-39
UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enter...    91   4e-17

Sequences not found previously or not previously below threshold:

UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photoba...   151   2e-35
UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 T...   106   7e-22
UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acineto...   100   4e-20
UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly...    97   5e-19
UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovo...    91   3e-17
UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acineto...    86   9e-16
UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobaci...    84   5e-15
UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderial...    83   8e-15
UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatole...    79   9e-14
UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax...    79   2e-13
UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepI...    78   3e-13
UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosph...    77   5e-13
UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylo...    77   6e-13
UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly...    77   6e-13
UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Maripro...    74   5e-12
UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia c...    71   5e-11
UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas Re...    70   8e-11
UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax...    69   1e-10
UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2             68   2e-10
UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythro...    65   2e-09
UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvula...    64   4e-09
UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=...    62   1e-08
UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK...    61   4e-08
UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkhol...    59   2e-07
UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingo...    55   2e-06
UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betapro...    54   3e-06
UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Perseph...    54   6e-06
UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candida...    53   8e-06
UniRef50_C9NP33 Type III secretion system outer membrane pore Ys...    52   1e-05
UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfu...    52   1e-05
UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus...    52   2e-05
UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingo...    52   2e-05
UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rh...    51   3e-05
UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1     51   4e-05
UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkhol...    49   1e-04
UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersini...    44   0.003

>UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae RepID=TRAK2_ECOLX
          Length = 242

 Score =  307 bits (787), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 239/242 (98%), Positives = 240/242 (99%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           MRKNNTAIIFG LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA
Sbjct: 1   MRKNNTAIIFGGLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD
Sbjct: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
           LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD+V
Sbjct: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADSV 180

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
           WTGNHLKMVRF VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE
Sbjct: 181 WTGNHLKMVRFVVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240

Query: 241 GN 242
           GN
Sbjct: 241 GN 242


>UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK n=4
           Tax=Enterobacteriaceae RepID=B5PME8_SALET
          Length = 246

 Score =  262 bits (668), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 2/242 (0%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+ N  A +FG+        AA    +P  + +  GGQ  ++ISNT PN+  +PGD++ A
Sbjct: 1   MKNNLPAFLFGTAMMVVMPPAAQAQ-SPATISLPQGGQFRLSISNTDPNMIFIPGDKVTA 59

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           + +  G L +   T +GGV+  +V  + FT  +ET  G   S+ A P +G GR  +L+S 
Sbjct: 60  ITAPGGMLADKRLTTAGGVLFTSVATRTFTIFVETALGQTFSVVATPVKGEGRVYRLMSA 119

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
              +  E   WET+  YE LL+++++AV  G +P G+ +V    + ++ P G S      
Sbjct: 120 EPPSRPETRKWETAQAYEKLLISLNRAVLTGDIPDGYGEVKPLSDGIRLPGGFSVTPLKA 179

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD-G 239
           W G+ L+  R+ + N       +RE DFW+PG RAVMF   A  L+ G RM V VIR  G
Sbjct: 180 WAGDQLRADRYELRNANTWGGALREQDFWKPGVRAVMFDNNAQALMGGGRMTVTVIRGNG 239

Query: 240 EG 241
           EG
Sbjct: 240 EG 241


>UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13
           RepID=D1S163_SEROD
          Length = 245

 Score =  250 bits (637), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/245 (31%), Positives = 122/245 (49%), Gaps = 7/245 (2%)

Query: 1   MRKNNTAIIFGSL-FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII 59
           MR     I+ G L  FS SV A+        V   N  Q  + +S+T+PN   V G+ I 
Sbjct: 1   MRLAAPVIVLGILSAFSVSVAASAANRDAKSVYFTNEDQLPVTLSSTNPNKIIVEGELIT 60

Query: 60  AVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV- 118
            +    G       T  G +++A  +   FT  ++T+RG ++S+      G GRT +L+ 
Sbjct: 61  NIYGP-GNAYEERNTDDGALMIALNSAATFTLYVQTDRGSSVSLNVTAVSGPGRTYELIP 119

Query: 119 -SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSV 176
            S  +   E+A AWE S PY   L++I+QAV  G +P  + + PV++    AP  GL   
Sbjct: 120 RSLPKIDNEDAKAWEESQPYVDTLMSIAQAVVNGDVPPDFVEYPVSRAAAYAPPIGLQFF 179

Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
           A+  W G+HL++ R+ ++N +  ++  +E  F+ PG R +  S     L  G +  V+VI
Sbjct: 180 AEKQWIGSHLRVTRYRMKNLSNLSMAFKERQFYVPGVRGISLS--TQSLFPGGQGYVWVI 237

Query: 237 RDGEG 241
              +G
Sbjct: 238 SRFDG 242


>UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS3_ENT38
          Length = 246

 Score =  246 bits (627), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 127/241 (52%), Gaps = 9/241 (3%)

Query: 4   NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63
              A++  S  F+  + AA    AP  +P  N    ++ +SNT+P    V G+ I +++ 
Sbjct: 8   AAAAVLLASGIFTSGLRAAT---APAAIPFENDAAFNVTLSNTNPTKVVVDGELITSISG 64

Query: 64  LDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQL--VSDL 121
             GA  +   T  G ++++ +  + FT  ++T+ G +LS+   P+ G G+T++   +S  
Sbjct: 65  PTGAY-DQSTTDDGALILSPLVGQNFTLFIQTDHGSSLSLNVRPQAGNGKTLRFTPMSPP 123

Query: 122 RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAV 180
               ++A AWE    YE  LV +S+AV  G++P  + + PV++ T   P+  +    +  
Sbjct: 124 LRKNDDAKAWEEGQTYEKTLVALSRAVVNGQVPDDYVEYPVSRMTAYTPSTPVRLTPERQ 183

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
           + GNHL++VRF + N      ++RE DFW  G RAVM SQ  +QL AG     +V+   +
Sbjct: 184 FVGNHLRIVRFRMNNPGSITQSLRERDFWLKGVRAVMLSQ--NQLYAGGEGYAWVVFSDD 241

Query: 241 G 241
           G
Sbjct: 242 G 242


>UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF3_ECOSE
          Length = 259

 Score =  236 bits (602), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 94/241 (39%), Positives = 131/241 (54%), Gaps = 8/241 (3%)

Query: 6   TAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLD 65
              +  SL  +C V AA     P  VP+    QA IA+SNT PNL  VPGDRI+AV+S  
Sbjct: 16  AVALLCSL--ACGVQAAPSAQLPVRVPVSPDAQARIALSNTQPNLLVVPGDRIVAVDSAQ 73

Query: 66  GALTN-----NEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           G  TN         A+GGVV+ T    PFTF + TE GL +S+   P+   GR + L+SD
Sbjct: 74  GTFTNAGDYGQTGMANGGVVLMTEKTTPFTFYVRTEGGLVVSVIGQPQARDGRVVHLMSD 133

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET-LQAPAGLSSVADA 179
                + A  WE S  Y +LLV + +A+  G++P G+   PV  E     PAGL+  A+ 
Sbjct: 134 QPVRQKAAAPWERSHDYVALLVDVQKALLRGEVPPGYVASPVVGEPVFSLPAGLTLRAEH 193

Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239
           +W+G+ L++ R+ V N+   A  + E  F  PG R+V+ S  A  LL GA  +V+V  + 
Sbjct: 194 MWSGDALRVYRYRVSNRQSEARALPERLFSAPGVRSVLISPWAETLLPGASAEVWVTVEQ 253

Query: 240 E 240
           E
Sbjct: 254 E 254


>UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=Q4LC34_SODGL
          Length = 206

 Score =  234 bits (596), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 97/201 (48%), Positives = 136/201 (67%)

Query: 41  IAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLN 100
           + +SNT PNLF+VPGD ++AV+ +D +L     TA+G ++++T+NKKPFTF++ET RGLN
Sbjct: 1   MVLSNTEPNLFSVPGDSVVAVSGIDESLVRYAPTANGALMLSTLNKKPFTFVIETARGLN 60

Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQV 160
            S++AVP+ G+GRT  LV + +G    A  WE S PYES+LV ++QA+  G+LPAG+ + 
Sbjct: 61  FSLRAVPQAGSGRTFSLVGEGQGVSVAAKVWEQSVPYESMLVALNQALMAGRLPAGYGKA 120

Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQ 220
           P T E L  PAGL + A  VW G+ LK+VRF V N   + + + E DFWQPG  AVMF  
Sbjct: 121 PATHERLPLPAGLWAEALWVWKGHRLKVVRFRVTNPGTTPVRVNEPDFWQPGVWAVMFDT 180

Query: 221 PASQLLAGARMDVYVIRDGEG 241
           P  +++   RM V+V   GE 
Sbjct: 181 PTREIVPAGRMGVWVTLSGEA 201


>UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
           RepID=A4SUD0_AERS4
          Length = 242

 Score =  232 bits (591), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 83/227 (36%), Positives = 117/227 (51%), Gaps = 5/227 (2%)

Query: 14  FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQ 73
               +V           +    GG   + ISN +PNL  VPGDR+  ++S  G LT+ + 
Sbjct: 15  LLVLAVAPTTMAATAVTLTFSPGGHLDLPISNVNPNLIVVPGDRVTNISSAAGLLTDKKN 74

Query: 74  TASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWET 133
           T +G  + +T + KPFT  +ET  G   SI A PR   GR+ +L          A  WET
Sbjct: 75  TQAGAALFSTASDKPFTLYVETRLGQVFSINATPRATEGRSYRLFPTTPTPRPVAKVWET 134

Query: 134 STPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAV 193
           + PYES+LV +++A     LP G+    + KE     AGL +  D+ W GN L +VR+ +
Sbjct: 135 AQPYESMLVALNRA-----LPEGYGPASIDKEAPFTRAGLQATPDSAWDGNALHIVRYRL 189

Query: 194 ENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
            N     + +RE DFW PGTRA+M      +L+AGA   +YVIR  E
Sbjct: 190 TNPLSVPVVLREPDFWMPGTRAIMVHPRYQRLIAGASTWLYVIRTQE 236


>UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB08_ERWT9
          Length = 248

 Score =  221 bits (562), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 8/241 (3%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAP--TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN 62
           N            +    +  + P    +      Q + A S  SPN   V G++I  ++
Sbjct: 3   NKKYFLSPALLIAAAFQTHAAVVPGVKEISFGPNAQVNAAFSQVSPNRIIVQGEKITDIS 62

Query: 63  SLDGALTNNEQTASGGVV-VATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS-- 119
              GA  + +Q   G ++ +A    + FT  + T++   LSI+ +P+   G+T+  V   
Sbjct: 63  GPGGAFDSQKQPDGGALISLAPGVSQSFTLFVVTDKNSALSIEIIPKSIPGKTLSFVPQT 122

Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSVAD 178
                  E  +WE    YE  LV IS+++  G +P  + + PV++    +PA G++  AD
Sbjct: 123 APMKVKPEEKSWEEGQSYEKTLVDISKSIINGVIPQDFSEYPVSRVQAYSPAVGVTLRAD 182

Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
             + G H+++VR+ + N +    ++ E  F+ PG RAVM S     L +      YVI D
Sbjct: 183 KHFIGPHMRIVRYIMNNPSYLNQDLTEKQFYAPGVRAVMLS--TRNLYSHGEGYAYVIFD 240

Query: 239 G 239
            
Sbjct: 241 D 241


>UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK n=2 Tax=Pantoea
           sp. At-9b RepID=C8QE99_9ENTR
          Length = 245

 Score =  220 bits (559), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 8/246 (3%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+K  + +   +       +A+     P      N       +SNTSPN   + G+ I A
Sbjct: 1   MKKTVSVLTALAALTLVPAVASAVVPGPAGTVFENNAHLKAQMSNTSPNKIVIDGELITA 60

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           V   +GA T +  TA G +++  +  + FT  +ET  G+++S+   P+ G+GRT++L+  
Sbjct: 61  VTGPEGAYTKD-STADGALLITPLTGQDFTLFIETAGGVSVSLDVSPKPGSGRTLELIPA 119

Query: 121 --LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTK-ETLQAPAGLSSVA 177
                   +A AWE S P++  LV++++ V  G +P G+  +  ++      PAG+    
Sbjct: 120 DVPLKPNPDAKAWEESQPFQKTLVSVARTVANGGVPDGYTDMKASRAPAYNPPAGVLLTP 179

Query: 178 DAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
           +    G+HL+++R+ ++N       + E  FWQ G RAVM S     L A     V+VI 
Sbjct: 180 ERQLAGSHLRVMRYRMKNTGYVTRTLSEKQFWQQGVRAVMLS--TRTLYANGEGYVWVIF 237

Query: 238 --DGEG 241
             D EG
Sbjct: 238 STDKEG 243


>UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK n=6 Tax=Shewanella
           baltica RepID=A6WUR6_SHEB8
          Length = 272

 Score =  205 bits (522), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 100/274 (36%), Gaps = 39/274 (14%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+  N  +      F  SV+AAN    P      +     I +S+   N   V GD+I +
Sbjct: 1   MKIANPLVFAACALFPMSVLAAN--TPPKHYGFNDSETVPIELSSVDINRLVVEGDKITS 58

Query: 61  VNSLDGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118
           ++  +G    T  +   SG   V      PFT  + TE+G +  +   P+     T  + 
Sbjct: 59  IDCPEGFCVVTGTKSDKSGAARVNLNLAMPFTAYVSTEKGRHFGLFISPKAIPAVT-SIF 117

Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKL---PAGWYQVPVTKETL-------- 167
           +      E+   ++  TPY +++   +  +        P   Y+V V  + L        
Sbjct: 118 TAEHYREEQPSVFDKKTPYPTMMTEFTAQMIRYLATGKPIDGYRVHVVNDDLERTTVDSE 177

Query: 168 ---------------------QAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206
                                  PAGL++    V+TG H   + + V N     + +  +
Sbjct: 178 PRGTETSIDDAMFTRLNEQQMPKPAGLTTEPAFVFTGKHFNGIIYRVTNHAALPVTLTTA 237

Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
            F+ P TRA   S    +L       ++V+  GE
Sbjct: 238 QFYSPTTRAAALS--TYELAPKQTGHLFVVSGGE 269


>UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK n=2 Tax=Legionella
           RepID=D1RMP1_LEGLO
          Length = 239

 Score =  197 bits (501), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 13/244 (5%)

Query: 4   NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63
           N   +   S  F+ S+ A N       +    G + ++++S+ + N   V G+RI+ V+ 
Sbjct: 2   NALQLFVLSSVFATSLHAGNTV---ATLKFEEGERFALSLSSLNFNRIDVEGERIVKVSF 58

Query: 64  LDGAL-----TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118
            + +        +E    G VV+  +   P T    T    + S    P E  G+TI+LV
Sbjct: 59  PEHSFIIEQSKESEDDLDGAVVLKPLAHIPLTVYFTTNLNHHFSATVSPTEDLGKTIKLV 118

Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD 178
           S      + A A E S   +S L+T   A+  G  P+G+ +V +   T +    L     
Sbjct: 119 SKKLKGFDYAKAQEQSQYQQSDLMT---ALMEGTTPSGFQEVGIKPTTFRLHKHLKVTLV 175

Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
               G       + +EN++   + +  S F  P    +  S+    L        Y I  
Sbjct: 176 KQVRGKESSGYVYRIENQSNKPMELTASLFEHPKLMTMELSEKM--LQPSQTAYFYGIYR 233

Query: 239 GEGN 242
            + N
Sbjct: 234 EQSN 237


>UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrionales
           RepID=B6ESX6_ALISL
          Length = 251

 Score =  195 bits (495), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 14/252 (5%)

Query: 1   MRKNN--TAIIFGSLFFS-CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDR 57
           M+KN     ++  ++  S  S       L     P  +     I +S+ + N   V  D+
Sbjct: 1   MKKNPSQPLVMIAAVLLSFLSFEGRAKNLPSNTYPFNDNDTVPIVLSSLNINRLVVRDDK 60

Query: 58  IIAVNSLDGALTNN--EQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTI 115
           II ++   G  T+   +Q ASG + +      PFT  + T+ G N ++   PR       
Sbjct: 61  IIGLDCPTGFCTSKGNKQDASGSITLRLNIALPFTAQVTTKNGRNFTLFITPRAIPALVS 120

Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVR----GGKLPAGWYQVPVTKETLQAPA 171
           + +     T +E   +     Y + L   ++++      G L  G+    V   TL    
Sbjct: 121 EFIGT-ANTRQEKSVFTRDFDYPTALTQFTKSMMLWSERGFLIDGFSLHHVDPSTLPKDT 179

Query: 172 G-LSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230
             L+ +   V+ G     + + V N++   + +  S F+   TR+   ++    LL    
Sbjct: 180 NPLAIIPQTVFVGKEYSGIIYRVLNQSSGQVTLSTSQFYSYSTRSAAITK--DTLLPNED 237

Query: 231 MDVYVIRDGEGN 242
           M +Y++  G GN
Sbjct: 238 MTLYIVTGG-GN 248


>UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenophonus nasoniae
           RepID=D2U002_9ENTR
          Length = 227

 Score =  191 bits (486), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 11/228 (4%)

Query: 13  LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE 72
           +  S S+ A N T+ P  V         +++SN  PN+  V  DRI+  NS  G L + +
Sbjct: 1   MLISTSIWAENLTVTPHSV-------VRLSVSNREPNVIAVMNDRIVEANSAAGKLADKK 53

Query: 73  QTASGGVVVATVNKKPFTFILETERGLNLSIQAVP-REGAGRTIQLVSDLRGTGEEAGAW 131
            T SG ++  T    PF+  +ETE+G   ++ A+P ++  G  + +++        A  W
Sbjct: 54  ATDSGALIFTTEETTPFSLYIETEKGFGFTVNAIPVKKSQGINVSVMNAEAKADSSAQEW 113

Query: 132 -ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAP--AGLSSVADAVWTGNHLKM 188
            +TS  Y   +     A     +P G+ +         A   A         + G ++++
Sbjct: 114 GKTSDSYSQFITRTFTAAMNDNIPTGFVKNGRVNVNWSASALANFRFRDSVSFQGKNIRL 173

Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
           +R  VENKT   + + E  FW   T A+ F+   + L    ++ ++++
Sbjct: 174 LRVNVENKTSQPIQLNERVFWVLQTMAIAFNPTVNTLRPHEQVTLFLL 221


>UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly protein TraK n=2
           Tax=Photobacterium damselae subsp. damselae CIP 102761
           RepID=D0Z4T4_LISDA
          Length = 243

 Score =  190 bits (483), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 22/251 (8%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M K    +   +L F+ +V+A     AP  V   +    S+ +S+   N   V  D+I +
Sbjct: 1   MSKYPAVLGLCALIFAPTVLAT----APNTVLFSDNETVSVNLSSLDINRLVVKDDKITS 56

Query: 61  VNSLDGALT-----------NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109
           V    G  T                  G  +++    +PFT  + TE+G +  +   P  
Sbjct: 57  VTCPTGFCTMPANPVDESGTGAPVDPQGAGLISLNVLEPFTLYITTEKGRSFGVFVRPLA 116

Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGW--YQVPVTKETL 167
               T   +S  R T ++A  +E  +PY   L  +   +    +P G+   ++ V K   
Sbjct: 117 VPAITTVFLSTERDT-QKAQEFEKQSPYTQTLAALISHMIKETIPEGFAFQRLTVKKPIE 175

Query: 168 QAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLA 227
           QA   L     A + G HL  +   + NKT   + +  + F++ G +AV FS  +  +  
Sbjct: 176 QAK--LLLTPIASYQGEHLTGISVKISNKTAQYIQVEPTSFYKAGVKAVSFS--SMSIPP 231

Query: 228 GARMDVYVIRD 238
              + +Y I+ 
Sbjct: 232 HGSIYMYQIQG 242


>UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9_9GAMM
          Length = 239

 Score =  173 bits (437), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 25/249 (10%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           MRK  +  +      S   M AN       +P+      ++ +S  + N   V  D+II 
Sbjct: 1   MRKPLSVAL---ALISTMTMGAN------SIPVKENSDIALTLSQNNYNRIVVKNDKIIE 51

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
                 ++        G V V      PFT  + TE+G + S+     E  G+TI+LVS 
Sbjct: 52  AVFPPNSMAIKRDEQDGSVYVMLSATNPFTLFVTTEKGTHFSVTLNGEESLGKTIELVSP 111

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKL--------PAGWYQVPVTKETLQA--- 169
            +    +  A + +T  +++     +AV    L           +  V + ++  +A   
Sbjct: 112 PQ---PKVVASQANTTKDNMKTITQEAVPEAILALLTHMEQHKPFADVRIKRQFGKAQRW 168

Query: 170 PAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGA 229
             GL+ +    W G  LK     + N+    L + +  F + GT A+ FS+P+  +  G 
Sbjct: 169 SKGLTLLPKESWDGKLLKGETIELYNRGKEPLELSQEWFAKVGTLAIKFSKPS--IAPGE 226

Query: 230 RMDVYVIRD 238
           +  +Y ++ 
Sbjct: 227 KAMLYRVQG 235


>UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkholderia multivorans
           ATCC 17616 RepID=B3DCS7_BURM1
          Length = 319

 Score =  163 bits (411), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 13/236 (5%)

Query: 7   AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66
            ++ G L      +          V   N G  ++ +S   PN   +P      V++ D 
Sbjct: 84  IVLPGVLTVPGEGIGVPDPSNVQKVSWTNTGNKTVYLSADEPNRILLPFKNAYIVHTSDV 143

Query: 67  ALTNNEQTASGGVVVATVNK---KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRG 123
            +   EQ  S  V V   N        +I   + G  L +  VP++   +TI +  D   
Sbjct: 144 QVDKREQ--SNNVYVYWTNAPSQARHLYIEPPDGGSALGLAIVPKKIPAQTILVTDD--- 198

Query: 124 TGEEAGAWETSTP---YESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
           TG  +G    S+P   Y S +  +  A+  GK P G+ QV +    + A  GLS+  D  
Sbjct: 199 TGIVSGRRPKSSPGSEYTSHIQDLMAAIALGKAPDGFSQVDIQLPPI-AMNGLSATVDTR 257

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
           ++     +  + V N T S   +RE +F  P   AV    P   LL G +  V V+
Sbjct: 258 YSSQEGDLYVYTVRNPTQSRAVLREEEFDGPEVIAVSI-YPKPVLLPGEKTRVIVM 312


>UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photobacterium profundum
           RepID=Q6LW92_PHOPR
          Length = 244

 Score =  151 bits (381), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 15/243 (6%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64
              II G      S  A       T     +     + +S+   N   V  D+I  ++  
Sbjct: 7   FAIIIAGC----VSATAHAKNTPGTTYTFNDNDTVPVILSSVDINRLVVKNDKITGIDCP 62

Query: 65  DGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122
            G    +  +   SG   +       F   + T++G    +   P+   G T + +  ++
Sbjct: 63  AGFCVVSGTKTDTSGSARLKLNISVAFVAYVSTQKGRQFGMFITPQAIPGITSEFIG-VQ 121

Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRG----GKLPAGWYQVPVTKETL--QAPAGLSSV 176
            T      +E   PY + L   +  +      G++  G+   PV  +T+     A L+ +
Sbjct: 122 NTQHTPSVFEKKAPYTTQLAEFTAQMIRWTNTGEMMGGFSLHPVDPKTVTNTLTARLAVI 181

Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
            D ++ GN    +R+ ++N T +   +  + F+    R+   S    QL       +Y++
Sbjct: 182 PDTIFVGNTFSGIRYKLKNNTTTTQTLTTAQFYSRAARSAALS--TDQLAPNDTAWLYIV 239

Query: 237 RDG 239
             G
Sbjct: 240 TGG 242


>UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 Tax=Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1
           RepID=Q5ZTS1_LEGPH
          Length = 237

 Score =  106 bits (264), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 17/238 (7%)

Query: 12  SLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNN 71
           ++ FS  ++ A    A     + N     I  S   PN   +  DRI  + +    L + 
Sbjct: 5   AMIFSLGLLIATAEGAQIK-TVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTLVDA 63

Query: 72  EQ---------TASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119
                        +G +        + + FT  L TE+GL  +++  P+  A +TI   S
Sbjct: 64  CNGKANCKLIDDTTGILTFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIVFKS 123

Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179
             R     A A   ++ YE ++V   +A+  G LP G+ Q      ++            
Sbjct: 124 -YRNPVIRARA-PHTSSYEKVMVGFLRALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRLL 181

Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
              GN ++   F ++N T   ++ +ES F  PGT+ V  ++    L       +Y I 
Sbjct: 182 TVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKT--HLAPFETTRLYRIS 237


>UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
           ACICU RepID=B2I3Y8_ACIBC
          Length = 240

 Score =  100 bits (249), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 76/237 (32%), Gaps = 16/237 (6%)

Query: 12  SLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG-ALTN 70
              F  S+     T A   +   +     + +SNT PN+  V G RI+ +   D  AL  
Sbjct: 8   IALFISSIFLTTSTFAAQHITKADQETVQVTVSNTEPNVLVVDGRRIVNLVPSDVTALDT 67

Query: 71  NEQTASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEE 127
                 G +           P T  +  + G    +   PR      + LV    G    
Sbjct: 68  LPDKEQGTLYFKISPYFQNTPITLFVTDDEGTRYKLVLQPRSVGAEEVVLVPPKPG---- 123

Query: 128 AGAWETSTPYESLLVTISQAV------RGGKLPAGWYQVPVTKETLQAPAGLSSVADAVW 181
           AG  + S  Y   +  +   +          L          K  +        V    +
Sbjct: 124 AGTSKRSQSYLQQIKELMYVMGDDAENPQETLAVDGISRSFVKAEIPLWKESKFVLLRRY 183

Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
             + +    + + N T   +N+ E +F++ G  AV        L  G    VYV+R+
Sbjct: 184 DTDGMYGEMYQLTNLTNKTMNLLEQEFYRKGVSAVSIQN--LTLSPGRSTFVYVVRE 238


>UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly protein TraK n=1
           Tax=Vibrio coralliilyticus ATCC BAA-450
           RepID=C9NPU7_9VIBR
          Length = 238

 Score = 96.8 bits (239), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 88/236 (37%), Gaps = 10/236 (4%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64
             AI F  L  S +   A+          V+G   ++ ++  S N   V  D+I+ +   
Sbjct: 3   PHAISFVLLSMSLNTALASSASPAQPHLFVSGDTVTLELNQRSLNRLYVDNDKILNLTCP 62

Query: 65  DGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122
                   N    +G +++      PFT  L TE+G  L+++  P +   R  + +    
Sbjct: 63  THQCEVVQNPSDQAGSILLGLSEPHPFTAHLFTEQGRLLALEVQPSDTTTRVHRFI---- 118

Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVW 181
             G+ +     +T     +  +     G +         VT  ++ A  G L     AV 
Sbjct: 119 -PGDASHPQTLNTRILGFVKDLMHWSSGEEPSVSMTIARVTHASVMAHRGDLELTPVAVA 177

Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
               L  + + V N +    +I   DF+ P   A    +  ++L AG R  +Y+I 
Sbjct: 178 RQGPLSGIIYEVLNTSEGPTSISNRDFYSPSALAASLDR--NELPAGERTRLYLIT 231


>UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42
           RepID=A1WDF8_ACISJ
          Length = 245

 Score = 91.4 bits (225), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 11/240 (4%)

Query: 10  FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV-NSLDGAL 68
             ++    S++A     A  VV   + G   + IS    N   + G RI  V  S+ G L
Sbjct: 9   LSAILLLTSLLATEAG-ATQVVENADRGHVQVNISVNETNRLAIDGRRIANVVPSVKGVL 67

Query: 69  TNNEQTASGGVVVATVNKKP----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT 124
              +  A G       ++ P     T  +  E+G+   +  VPR  AG  I +       
Sbjct: 68  AGQKDEALGAYYFTLASESPNQGTVTVFVSDEKGVTYKLILVPRPVAGEEIIIRPPSEKA 127

Query: 125 GEEAGAWE--TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWT 182
              + A     +  Y+  +  +   +   +L      + V KE      G   +      
Sbjct: 128 TPSSRAAADGRTVSYQRRIKDLMLVMADDELKDSVETIQVNKEVPLWKEGRLILVAKYMD 187

Query: 183 GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242
           G  +   ++ + N + S + + E + ++ G RA+        L+ G   D+Y++R+ + N
Sbjct: 188 G-EVVGEKYRLTNVSPSEMLLVEQELYRRGVRAIAVEH--HTLMQGDGTDIYIVRERKDN 244


>UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enterobacteriaceae
          RepID=Q2VP23_ECOLX
          Length = 198

 Score = 90.6 bits (223), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 1  MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
          M+ N  A++ G+     S +      +P  +     GQ  ++ISNT PN+  +PGD++ A
Sbjct: 1  MKNNFPALLLGTALMITSPVTVYAQ-SPATLSFPQRGQFRLSISNTDPNMIFIPGDKVTA 59

Query: 61 VNSLDGALTNNEQTASGGVVVATVN 85
          + + +G L +   T++GGV+  +V 
Sbjct: 60 ITAQNGMLADKRLTSAGGVLFTSVA 84


>UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii
           SH046 RepID=D0SGY8_ACIJO
          Length = 243

 Score = 86.0 bits (211), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 82/240 (34%), Gaps = 15/240 (6%)

Query: 10  FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV-NSLDGAL 68
              +  + S++ +    A   V        ++ +S+T  N   V   +I +V  S+  AL
Sbjct: 7   LALIPLTVSLLFSPFAQAVQHVDKAYLDNVTVNVSSTEQNALVVQDRKITSVIPSIADAL 66

Query: 69  TNNEQTASGGVVVA---TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTG 125
              +    G +          +  +  +  ++G    +   P    G   +L+       
Sbjct: 67  EYEKDVTQGVLYFKVAPWYANRTISAFVNDDQGTRYKLVMRPTASLGAE-ELILIPPKVK 125

Query: 126 EEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPV-------TKETLQAPAGLSSVAD 178
           E +   + S  Y   +  +   V G        ++ +         + +           
Sbjct: 126 EGSSTDKGSQSYLQQIKELIY-VMGDDADDPQDELAIEGISRSFVNQQIPLWKEARMTFA 184

Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
           + + G+ L    + V N T S L + E +F++    AV        LL G   +VYV+R+
Sbjct: 185 SRYDGDGLYGEHYKVTNITNSNLILLEQEFYRKKVVAVSIEH--LNLLPGQTTNVYVVRE 242


>UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobacillus ferrooxidans
           ATCC 23270 RepID=B7J828_ACIF2
          Length = 390

 Score = 83.7 bits (205), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 86/214 (40%), Gaps = 15/214 (7%)

Query: 31  VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTA----SGGVVVATVNK 86
           + + +G   SI +S  +PNL   P          +  +TN++          +VV+T   
Sbjct: 172 IRVHSGKTYSIIVSGVAPNLIETPFRH------PEMLVTNSKLATPIVHGQNLVVSTTPA 225

Query: 87  KPFTFILETERGLN--LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTI 144
            P    +  +   +  +S+  +P++   +  +L+                + Y   +V +
Sbjct: 226 FPVGVYVTGKNPHDPMISLTMIPKKIPPKNYRLIIPGFIPSVAPTVTGQRSGYAQRMVHL 285

Query: 145 SQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVWTGNHLKMVRFAVENKTLSALNI 203
            +     ++P  + Q    +  L  P G  S   +  W GN  ++  ++++N  +  +N+
Sbjct: 286 MRDAALKQVPENYRQSH-KRLALPGPGGAFSWTWEFSWVGNRYRITAYSLKNTLVGPVNL 344

Query: 204 RESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
            E++F+ PG  +     P   L  G +  V+VI 
Sbjct: 345 METNFYAPGVLSASV-YPHHHLYPGEKTQVFVIT 377


>UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderiales
           RepID=A2SNK2_METPP
          Length = 305

 Score = 82.9 bits (203), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 83/220 (37%), Gaps = 15/220 (6%)

Query: 28  PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVN-K 86
             V+ + +       +S++  N  + P D    +++ D       QT    + +   + +
Sbjct: 88  ANVIRVQSDRNEIAYVSSSMANRISTPFDAPRVIDTQDVEY----QTVGQSIYLLPKDPE 143

Query: 87  KPFTFILE--TERGLNLSIQAVPREGAGRTIQLVSDLR-----GTGEEAGAWETSTPYES 139
           KP    +         +S+  VP+    +TI L  D        TG ++     +  Y  
Sbjct: 144 KPVALYITGSNANDPVVSLTLVPKPIPQQTIVLQIDAPLAKGGVTGVDSEPAPVTDVYSE 203

Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199
            L  + + V   K+P G+ +  +       P G+S      ++G    + R+ +      
Sbjct: 204 RLRYLLRQVALNKVPEGFAEGTLPNAAAVLP-GVSIHPMTRYSGPAYDIYRYRIRGTGDQ 262

Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239
            + + E  F+  G RAV F  P + +  G    ++V+ D 
Sbjct: 263 -VELAEDAFYTEGVRAVAF-FPTAVIRKGEETTIFVVADK 300


>UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatoleum aromaticum EbN1
           RepID=Q5NX51_AZOSE
          Length = 294

 Score = 79.4 bits (194), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 4/227 (1%)

Query: 15  FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74
           F  S+      L    + +  G    + +S    N    P     AV  +   +      
Sbjct: 62  FGSSLSGDVNALKAQTIRVTPGQNEVVNVSMVQANRVGTPFAAPKAVGIIPEGMIVEAVG 121

Query: 75  ASGGVVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132
            S  + + + +  P +  +   R     +S+  VP+    +T  L  D+   G +     
Sbjct: 122 QSLYIQMPSTSTDPQSLFVTGSRPNDPVISLILVPQAIPSQTAILQFDVPEPGLQPDQNN 181

Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192
               Y+  L+ + +     ++P G  +  + +   +    L    +  ++   +   R+ 
Sbjct: 182 EPDNYQQRLIQMMRQAAVNQVPVGMSEAALPRAVGRRGPLL-IRPEMRYSSATMDQWRYR 240

Query: 193 VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239
           VE+ +   + + E+ FW+ G RAV        L  G    VYVI D 
Sbjct: 241 VESISDEEIELDEAAFWERGVRAVAILPSTR-LRKGDHAYVYVISDK 286


>UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax=Sphingomonadaceae
           RepID=Q0KJJ0_9SPHN
          Length = 274

 Score = 78.7 bits (192), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 84/238 (35%), Gaps = 13/238 (5%)

Query: 10  FGSLFFSCSVMA-ANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN-----S 63
            G+   +   +  A   LA   V   + G      S       ++ GD+  +V+     +
Sbjct: 32  IGAALIALGALGLATPALADQNVMAADNGTVPCVASAKDLTRISLAGDQFASVSKITTGN 91

Query: 64  LDGALTNNEQTASGGVVVATVNKKPFT---FILETERGLNLSIQAVPREGAGRTIQLVSD 120
                    +   G + ++  +  P T   F   T +G         R      +  +++
Sbjct: 92  PAEDFKIVNEPVRGDIYISVPDGFPRTSLSFFGTTRKGFVYKFVCQVRGTEAEQV-FIAN 150

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
              T + A  WE  +  E   V ++QA+  G+   G+       E +     L       
Sbjct: 151 AAITSDRARDWEVQSSPEDAAVRLAQAMYRGEAIDGFDMRSTVLEPVMV-GRLQVQQVGE 209

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
           + G  +K +   V N    A ++ E+     G  A+ F  P S+L AG    VY+I+ 
Sbjct: 210 YRGAEMKGLVLRVRNTGRQAQSLDENMLAARG--ALAFMAPTSELAAGQEAAVYLIQS 265


>UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepID=C4NUW8_ECOLX
          Length = 458

 Score = 77.9 bits (190), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 23/219 (10%)

Query: 43  ISNTSPNLFTVPGDRI--IAVNSLDGALTNNEQTAS-----GGVVVATVNKKPFTFILET 95
           +S + P++     + I   +VN      T+N Q          V VAT  + P T  + T
Sbjct: 225 LSKSGPSIMEAMLEAISGTSVNQPVTGATDNGQCGEVCIKENVVYVATDKQYPVTMFI-T 283

Query: 96  ERGL---NLSIQAVPREGAGRTIQLVSDLRGT------GEEAGAWETSTPYESLLVTISQ 146
           E+G     LS+  VPR    R + L  D            +A  WE S PY   + ++ +
Sbjct: 284 EKGSEAQALSLTMVPRRIPPREVFLKLDGGVGITGAFANTKAETWEQSQPYVETIRSVFR 343

Query: 147 AVRGGKLPAGWYQVPV---TKETLQAPAGLSS-VADAVW-TGNHLKMVRFAVENKTLSAL 201
            +  G++P G+    +         A  G+    +   +  G+HL +      N +   +
Sbjct: 344 KIALGEVPQGYTLNRIPAGAAVPSCAHPGVKVDFSKGQYMMGHHLNVFIGVALNVSDQPI 403

Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
             +E+        AV  + P + L  G + ++YV +  +
Sbjct: 404 EFKEALCGSWDVAAVT-TWPLNVLEPGQKTEIYVAKKQK 441


>UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2G6C6_NOVAD
          Length = 252

 Score = 77.1 bits (188), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 77/218 (35%), Gaps = 14/218 (6%)

Query: 35  NGGQASIAISNTSPNLFTVPGDRIIAVN-----SLDGALTNNEQTASGGVVVA---TVNK 86
           +G      +S      F +  D+  +V+     +         +   G + V+   T   
Sbjct: 38  DGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTNEPVRGDIYVSVPETYAA 97

Query: 87  KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQ 146
           +  +F   T++G    +     +    T   +++       A  WE+ TP E+  V + Q
Sbjct: 98  RSISFFTTTKKGFVYKVACRVEQIPA-TQVFITNPAIAKNRAADWESQTPIETSAVRLIQ 156

Query: 147 AVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206
           A+   +   G+ +V  +         L     A + G  L      + N+   ++ + E 
Sbjct: 157 AMANDRTVDGF-EVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAER 215

Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVI--RDGEGN 242
           D     T AV  ++P   L  GA    +V+      GN
Sbjct: 216 DLAPRDTLAVSIAEPK--LEPGASTTAFVVGASGETGN 251


>UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylobacterales
           RepID=A7H3G5_CAMJD
          Length = 270

 Score = 76.7 bits (187), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 100/266 (37%), Gaps = 42/266 (15%)

Query: 8   IIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGA 67
           +I  +L  S S+ A N    P+          +I +SN+S N   +P  +I+ V      
Sbjct: 4   VILSALTLSTSLFAINVIDNPSS------DIININVSNSSVNRIVLP-TQILDVAYSKEK 56

Query: 68  LTNNEQTASGGV--------------------------VVATVNKKPFTFILETERGLNL 101
             + + + +                             +V    K    F +   R  + 
Sbjct: 57  GIDIKISGNQAFIKFLPIQKERVRSVGKDRYEPVGEPEIVYDKAKGSEVFFVTANRTYSF 116

Query: 102 SIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVP 161
           ++   P+     T+ +++D     +E   +E+  PY S +  I++++  G +P G+ +V 
Sbjct: 117 ALN--PKNMDAETV-IINDFSAQKDEILKYESDDPYMSTMGKITESILKGGVPQGY-KVK 172

Query: 162 VTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF-----WQPGTRAV 216
              + + +   L +     + G   K     V+NKT  A+ +   D+       P   ++
Sbjct: 173 KINKVISSDKTLITRELTNYDGLLYKATLLEVKNKTDKAIRLNPKDYISIAKEAPKAISI 232

Query: 217 MFSQPASQLLAGARMDVYVIRDGEGN 242
            ++   + LL  ++  + +I  G  N
Sbjct: 233 YYNNEVNHLLPYSKAQIIIITKGGRN 258


>UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly protein TraK n=17
           Tax=Gammaproteobacteria RepID=C3NU46_VIBCJ
          Length = 300

 Score = 76.7 bits (187), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 83/229 (36%), Gaps = 22/229 (9%)

Query: 24  GTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTA--SGGVVV 81
            T  PT + M  G    I ++    N    P +      S     T++ QT      V V
Sbjct: 58  STDVPTTLLMTPGVNELIPVALGHLNRIVTPFE------SPQVRTTSDAQTQIKGNVVYV 111

Query: 82  ATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLR------GTGEEAGAWET 133
           AT  + P +  +         LS+  VPR    R I L  D +          +A  WET
Sbjct: 112 ATDKESPVSLYITPPGQEAPALSVTLVPRRIPPREITLAIDGQQWPIKGVVNRKAATWET 171

Query: 134 STPYESLLVTISQAVRGGKLPAGW-----YQVPVTKETLQAPAGLSSVADAVWTGNHLKM 188
           + PY   L  + + +   +LP G+      Q   + +  Q           + TG++  +
Sbjct: 172 AQPYVDSLRDLLRHLALNELPQGYDIRLAGQTDTSPKCFQPGLKFGFKQGQIVTGHYFTV 231

Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
               VE+     +   E     P   A  +  P + LL G + ++YV+ 
Sbjct: 232 YVGLVESFADEPIEASEIACHAPDIVASAY-WPRNILLPGEKTELYVVV 279


>UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans
           PV-1 RepID=Q0F359_9PROT
          Length = 236

 Score = 73.7 bits (179), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 77/232 (33%), Gaps = 15/232 (6%)

Query: 19  VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL-DGALTNNEQTASG 77
             A     A  ++   +       IS+  PN   + G  I        G +        G
Sbjct: 4   TAAPTSAFAIQILDAADSDSLVARISDHDPNRIRIAGGFITMAVGPRSGRIAIETDDKRG 63

Query: 78  GVVVATVNKKP-----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132
            + V      P     FT  L    G + ++   P   +G++  LV   R    +     
Sbjct: 64  QIFVRVNENVPDKHKAFTLFLTDAEGRDYTLLLKPARISGQS--LVIRPRRQRPQVSNPA 121

Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192
                E+ +  + +A+  G +P    ++  T + +    G +   + V       + R+ 
Sbjct: 122 GVEKREARIKRLVRAMALGDVPR-HCEISETDKRVPLWKGTNFHLNRVMRCGDFNVERYR 180

Query: 193 VENKTLSALNIRESDFWQPGTRAVMF------SQPASQLLAGARMDVYVIRD 238
           + N     + + E + +  G  AV        ++ A  +  G    V ++R+
Sbjct: 181 LANSGDKVIRMAEQELYSNGVAAVSVERMHLNAEGAVSIPPGNATMVIIVRE 232


>UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia cenocepacia J2315
           RepID=B4EQI3_BURCJ
          Length = 248

 Score = 70.6 bits (171), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 79/248 (31%), Gaps = 15/248 (6%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M  N    I  +  F    +AA   L                +S T  N   + G  I  
Sbjct: 1   MFSNLRKWIAAATLF---PIAAANVLPANAATAGASEPREYTVSATEQNRLEIAGRAIKK 57

Query: 61  VNSL-DGALTNNEQTASGGVVVATVNKK----PFTFILETERGLNLSIQAVPREGAGRTI 115
           V     GALT  +   +G    A  N        T  +  ++G    +   PR      I
Sbjct: 58  VVPSHKGALTYVKDKGNGVFYFAFANGGDGMGTETLYVIDDQGATYQLLLQPRRVPSANI 117

Query: 116 QL--VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKL---PAGWYQVPVTKETLQAP 170
            +    D  G    A    TS+ Y+S +  +   +   ++              + +   
Sbjct: 118 IVPAAGDAPGRSAAARTAATSSAYQSAIKDLVYEMAAAQVDPSADPAASAVPVHQDVPLW 177

Query: 171 AGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230
                  D  +  +     ++ + N + S + I E + ++PG   V   Q    L  G  
Sbjct: 178 KEARLTFDTKYVDDTFVGEQYTLTNVSSSDMVIAEQELYRPGVVVVAVEQ--QTLAPGDS 235

Query: 231 MDVYVIRD 238
             VY++R+
Sbjct: 236 TRVYIVRE 243


>UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas RepID=B7XGQ6_PSEPU
          Length = 346

 Score = 69.8 bits (169), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 30/242 (12%)

Query: 19  VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGD--RIIAVNSLDGALTNNEQTAS 76
            + A    +   V + +G    I IS    N    P D  ++  V++ D +++ N     
Sbjct: 95  PVPAQPIESRQDVVVSSGTNTLIPISRGQMNRIVTPFDVPKVQTVSTADISVSGN----- 149

Query: 77  GGVVVATVNKKPFTFILETE--RGLNLSIQAVPREGA--------GRTIQ-LVSDLRGTG 125
             + V T   KP T  +  +    + +S+  +P+            + +Q L S L  T 
Sbjct: 150 -VLYVTTFEDKPVTMYVTPDDDETVAISLTLLPQGVPPIQANLILAKNVQGLASGLPVTS 208

Query: 126 E-----EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
                 +A  WE S PY   L ++ + +  GKLP G+          + PA         
Sbjct: 209 STNYSGQARKWERSQPYMDTLRSLMREMALGKLPRGYS-FGALTNGNKIPACAQPSLSFD 267

Query: 181 WTGNHL-KMVRFAVENKTLSALNIRESDFWQPGT----RAVMFSQPASQLLAGARMDVYV 235
           ++ + L +   F V   T   ++ R  +F         RA + + P   L  G + +V+V
Sbjct: 268 FSKSQLIEGHDFKVFVATAENVSARTVEFDHASCTHPHRAAVSAWPDEVLEPGQKTEVFV 327

Query: 236 IR 237
           I 
Sbjct: 328 IT 329


>UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax=Burkholderia
           thailandensis MSMB43 RepID=UPI00016ACDC9
          Length = 206

 Score = 69.4 bits (168), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 11/202 (5%)

Query: 46  TSPNLFTVPGDRIIAVNSLD-GALTNNEQTASGGVVVATV----NKKPFTFILETERGLN 100
           T  N   + G +I  +     GALT  +  A+G +          +   +  +  +    
Sbjct: 2   TEQNRLAIDGRKITQIIPKQKGALTYVKDLANGVLYFTFADPDAAQGTESLFVVDDHNDT 61

Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGA-WETSTPYESLLVTISQAVRGGKLPAGWY- 158
             +   PR      I + +   G      A    ++ Y+  + ++ + +           
Sbjct: 62  YQLLLQPRRMPSANIVVPAVGGGEVRRTQAISTRTSSYQFAIKSLLEEMVAAHDDQDAQF 121

Query: 159 --QVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAV 216
              V    + +          +  +T + L   ++ + N +   + I E + ++ G  A+
Sbjct: 122 SAAVTPVNQMVPLWQEAQLTLELRYTEDDLVGEQYRLTNVSTGDMVIAEQELYRKGVLAI 181

Query: 217 MFSQPASQLLAGARMDVYVIRD 238
           +  Q    L  G    VYV+R 
Sbjct: 182 VIDQ--QTLAPGDSTAVYVVRG 201


>UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2
          Length = 185

 Score = 68.3 bits (165), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 64  LDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRG 123
           ++G L   + T +G + V ++   P    + +E G    +   P    G  I +      
Sbjct: 1   MEGDLELQKDTTTGQLFVRSLTSNPTNLFVISEEGKTYLLVLKPTSKQGDNIVIDVAGAN 60

Query: 124 TGEEAGAWET---------STPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLS 174
             E A              ST Y   +  +  ++  G             +T+       
Sbjct: 61  RREAAVLASQTGPMPVTMNSTEYVRAIKKMMASMMRGTTGDMGINHSHEYQTVPLWKNTL 120

Query: 175 SVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVY 234
            + +  +T   ++ + F + N     L IRE +F++ G  AV        L  G   DV+
Sbjct: 121 FIQNGSYTAADMQGLSFTLTNLGTKQLEIREQEFYRQGVLAVAV--RKQILQPGEITDVF 178

Query: 235 VIR 237
           +I 
Sbjct: 179 IIS 181


>UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythrobacter
           RepID=Q2N5I0_ERYLH
          Length = 271

 Score = 64.8 bits (156), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 72/247 (29%), Gaps = 10/247 (4%)

Query: 2   RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61
           R+ +  +    L      +A     A   V   +       ++        +  D    V
Sbjct: 26  RRPDPGLKLSGLAVIAFALAPVPAHADQFVEAADNATIDCELARGELTRIALIDDGFANV 85

Query: 62  NSL-------DGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRT 114
           + +       D  +T+        + V             T +   +   A    G   T
Sbjct: 86  SKIASGFPYNDFQVTHEPVRGDIYISVPPQFAAARVSFFATSKAGYVYKFACRLGGQEAT 145

Query: 115 IQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLS 174
              +++      EA  WE  T  E   + + +A+    +  G+          +   G+ 
Sbjct: 146 QLFITNPALAKSEAAEWEAETGPEDAAIRLIEAMATDAVLPGFT-ARAELSAPRRSGGIE 204

Query: 175 SVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVY 234
               A + G+ L   RF V N    +L +        G  A+ F+     L  G     +
Sbjct: 205 VQLVAEYQGDELTGQRFLVRNLGQESLALGSEREGPAG--ALAFAYGRDALAPGEATSAF 262

Query: 235 VIRDGEG 241
           ++    G
Sbjct: 263 LVFARGG 269


>UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VN25_9PROT
          Length = 243

 Score = 64.0 bits (154), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 16/222 (7%)

Query: 31  VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGA----LTNNEQTASGGVVVATVNK 86
           V   +GG  +  +S +         D   +V   +G      +   + A+G + +     
Sbjct: 25  VEASDGGVVTGYVSASGITRLRFTSDAAASVQMAEGGEGAGFSIQHEPATGDLYLTLGRL 84

Query: 87  KP-------FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYES 139
                     +F + T  G    ++   +      I++ +      +   A    T  + 
Sbjct: 85  PRQGEAVGAASFFVTTRAGYTYQVELAAKATPSTQIEVRNPDLARRQTERALAE-TSLDE 143

Query: 140 LLVTISQAVRGGKLPAGW-YQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTL 198
            +V +++A+    L  G+  + PV +E  +A   L     A +  + L+       N + 
Sbjct: 144 EVVALTRAMWASALLDGYEIKRPVVRE--RAAGTLRLAVRATYESDALQGRVLIARNPSR 201

Query: 199 SALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
             + I ES F  PG  AV    P   L  GA + V ++  G+
Sbjct: 202 GDVAIEESLFLAPGVAAVTIQGP-RVLGPGASVPVLIVDRGQ 242


>UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=Enterobacteriaceae
           RepID=Q8KJZ3_PROVU
          Length = 388

 Score = 62.5 bits (150), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 79/242 (32%), Gaps = 36/242 (14%)

Query: 31  VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASG-GVVVATVNKKPF 89
           + +  G    I IS    N    P +R          L + +    G  V V T N +P 
Sbjct: 136 IIVEPGVNTLIPISMGQINRIVTPFERPTI---QRLQLDDVKVNVEGNAVYVYTPNSRPV 192

Query: 90  TFILETERGLNLSIQA--VPREG-AGRTIQLVSDLR----------------GTGEEAGA 130
              +  +   ++SI    VP+     +   ++S                   G+  +A  
Sbjct: 193 ALYISEKGDESVSISVSLVPQRIAPVQATLMLSRKLNNAAVAGGGVSPIMYGGSEAKAKK 252

Query: 131 WETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWT-------- 182
           WE    Y   +  I + V  G +P G+    +T          ++     +         
Sbjct: 253 WEQKDSYVETVRNILRTVALGDIPPGYALGNLTSSVSIPNCNFNTGTVQDYIRYNFNGGQ 312

Query: 183 ---GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVY-VIRD 238
              G+   ++    +N   + + + ES    P   A       + L  G + + Y V+R+
Sbjct: 313 YINGSQFSVIVGIAQNTGPTTVTVDESLCTHPQMAARAL-WSRNTLAPGQKTEAYFVLRN 371

Query: 239 GE 240
           G+
Sbjct: 372 GQ 373


>UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK n=1
           Tax=Arsenophonus nasoniae RepID=D2U0R3_9ENTR
          Length = 340

 Score = 60.6 bits (145), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 82/266 (30%), Gaps = 45/266 (16%)

Query: 15  FSCSVMAANGTL---APTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNN 71
              SVM  N      +   V + +G    I IS   PN    P    + +     ++  +
Sbjct: 62  VPSSVMRNNNQQRLDSRMTVTIHSGENRLIPISVGQPNRIVTPFPEPVVLVIKKNSVKIS 121

Query: 72  EQTASGGVVVATVNKKPFTFILETERG---LNLSIQAVPREGAGRTIQLV---------- 118
           ++     + + +  K+P    + T +G     +S+   P +       L+          
Sbjct: 122 KE--GNVIYITSYKKEPIAMYI-TNKGDESKAISLSLHPEQRPPVEATLLLAKEINTTNS 178

Query: 119 ------------SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET 166
                       +      E+A  WE S  Y   +  + +A+  G LP G+    +    
Sbjct: 179 NYNNSMYYSPTNASQSANREKAERWEKSDTYAKTITKLLKAIALGDLPTGYEITDLKDTN 238

Query: 167 LQAPAGLSSVADAV------------WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTR 214
           +  P  L                     G    ++     N  LS + + ES    P   
Sbjct: 239 VSIPNCLFRTGGDQDNIKYSFKNGQYIAGARFSVIVGVASNTGLSTVLVDESLCTHPRLA 298

Query: 215 AVMFSQPASQLLAGARMDVY-VIRDG 239
           A       + L    + + Y VIR+ 
Sbjct: 299 ARAL-WSNNTLAPNQKTEAYFVIRND 323


>UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1
           RepID=C5ANL8_BURGB
          Length = 246

 Score = 58.6 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 2   RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61
           R     +   +  F     +A       +V   +     + +S    NL T+ G R I  
Sbjct: 13  RLMLPLVAPLAALFVAGPASAIS-----IVKGADRQAQQVFVSAAEYNLLTMSGGRQITK 67

Query: 62  NSLDGALTNNEQTASGGVVVATVN----KKPFTFILETERGLNLSIQAVPREGAGRTIQL 117
                  +     A         N     +  T  +  + G++  +  VP       +++
Sbjct: 68  VVPTVPGSLAWTQAGNQFWFKPSNPTALNETITIFVFDDAGVSYRLSLVPGPRPAEDVRI 127

Query: 118 VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGK-LPAGWYQVPVTKETLQAPAGLSSV 176
               +      G    ++ ++  +  +  A+ G + +P         +  +      +  
Sbjct: 128 ----QPPASSTGRALRASAFQRHVKLLILAMSGAQSVPQ--VAYTSVETAVPLWKEATLT 181

Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
               ++   L    + + N + + L++ E + + PG  AV        L AGA   VYV+
Sbjct: 182 RVREYSDGDLVGETYTLANTSHNDLSLDERELYAPGVLAVAIEDA--NLPAGASTIVYVV 239

Query: 237 RD 238
           R+
Sbjct: 240 RE 241


>UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58
           RepID=Q1N903_9SPHN
          Length = 277

 Score = 54.8 bits (130), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 80/230 (34%), Gaps = 20/230 (8%)

Query: 20  MAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE-----QT 74
           M A+  LA   + + + G      S+      ++  D+   V+ +  A  N +     + 
Sbjct: 50  MTASPALADQNLLVSDNGTVECVASSKDLTRISLKADKFANVSKVAAASENEDFSVVFEP 109

Query: 75  ASGGVVVATVNKKP---FTFILETERGLN--LSIQAVPREGAGRTIQLVSDLR--GTGEE 127
             G + ++     P    +F   T +G     S     +      +  V   +   + + 
Sbjct: 110 LRGDIYLSVPEGYPRKALSFFGTTVKGYVYKFSCNVQSQGAEQIFVANVDMEKAGQSEQV 169

Query: 128 AGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLK 187
           AG  +         + + QA+       G+      +  +Q    L     + + G  L+
Sbjct: 170 AGLSDKDRS-----IELIQAMYRQDALPGFEIRSQDRAPVQV-GSLKVQLVSEYVGLELR 223

Query: 188 MVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
             +  +EN +  A+++ +         AV  +  +++L  G +   +++ 
Sbjct: 224 GKQLLIENVSRKAVDVTDDTVASEDALAVSVT--SARLEPGQKTTAFIVS 271


>UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betaproteobacteria
           RepID=A1W657_ACISJ
          Length = 335

 Score = 54.4 bits (129), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 77/233 (33%), Gaps = 26/233 (11%)

Query: 17  CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTAS 76
           C   A   + AP       G  +  +I+++S N                G +        
Sbjct: 116 CGGGAPAISAAPNTPSSTPGLASPASITSSSVN--------------PAGDVIVECDRDK 161

Query: 77  GGVVVATV--NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR----GTGEEAGA 130
           G V +       +P    + +      ++     +    TI +           G EA  
Sbjct: 162 GEVYIRPAGDALRPINLFVSSATAT-YTLLLRRSDTPADTIVIRDKTPQALRPGGPEAAP 220

Query: 131 WETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVR 190
              +  +   +  +  A+   ++PA   +V    + +Q            + G      +
Sbjct: 221 SGPAPSHVRAMKGLLVAMSSNRVPAD-VRVEEASKPVQLWTEARFTLLRRYEGRGYVGEK 279

Query: 191 FAVENKTLSALNIRESDFWQPGTRA----VMFSQPASQLLAGARMDVYVIRDG 239
           +A++N +L+ + + E +F +P +RA       +     L  G    VYVIR G
Sbjct: 280 YALQNVSLAPMVLAEQEFDRPDSRAGGEITGIAIEHHNLRPGETTSVYVIRRG 332


>UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1
           RepID=C0QUX3_PERMH
          Length = 252

 Score = 53.6 bits (127), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 71/187 (37%), Gaps = 12/187 (6%)

Query: 35  NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILE 94
            G    + +SN   N+   P +++    S    L+   Q     V+V   +K+P   ++ 
Sbjct: 25  EGKPLLLDVSNQVSNIIEFP-EKVKKAISASQQLSAKIQ--GNKVIVLLPSKEPADLLVS 81

Query: 95  TERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAW-------ETSTPYESLLVTISQA 147
           T+ G   ++   P+    + +++V       ++  A        E    YE  L+ I +A
Sbjct: 82  TKSGKVYALLLNPKIIPTQIVKIVDKQIEEEKKKKAKKEKVKQIEKGKDYEEKLINILKA 141

Query: 148 VRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESD 207
              G+L   +Y+V    +TL+            + G+   ++   +  K   A  I E  
Sbjct: 142 AINGQL-DDYYEVKRKVQTLETQNYF-IEITKEYQGDEFGVLLGKIYPKKKDAKPITERL 199

Query: 208 FWQPGTR 214
             Q  +R
Sbjct: 200 LAQVLSR 206


>UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia
           amoebophila UWE25 RepID=Q6MBA1_PARUW
          Length = 230

 Score = 53.2 bits (126), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 9/177 (5%)

Query: 33  MVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG---ALTNNEQTASGGVVVATVNKKPF 89
           +         +S+T  N   +   RI  V + +    ++   E T    +     + K  
Sbjct: 25  LNTTSLLPCYLSSTYQNRVMIENGRIKKVITPESDRLSIQIEELTGQAFIFARDPHLKEI 84

Query: 90  TFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT-GEEAGAWETSTPYESLLVTISQAV 148
           +  + ++ G+   I     E     + L    +        A E  +     ++   Q +
Sbjct: 85  SLSVISDSGVIQDIHICFIERQPEVVVLQEPEQKECSPGVPAAEELS-----ILKQVQEI 139

Query: 149 RGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRE 205
             G++P G+    ++ +      G+     A + G+   +  + + N       + E
Sbjct: 140 VAGRIPTGYRHKSISSQKRTLKKGIELTLKAKFIGSENTLYLYQLANTGKQPQTVLE 196


>UniRef50_C9NP33 Type III secretion system outer membrane pore YscC n=1 Tax=Vibrio
           coralliilyticus ATCC BAA-450 RepID=C9NP33_9VIBR
          Length = 686

 Score = 52.5 bits (124), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 40/96 (41%), Gaps = 2/96 (2%)

Query: 143 TISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVA-DAVWTGNHLKMVRFAVENKTLSAL 201
              +++  G +P G+ +  + +   +    L+  A D  + G    ++   + N +    
Sbjct: 571 DALRSLIKGYIPNGFEKGKLAEPHCRKDVILTKFAKDDQYIGPEFNIIAGTIYNPSSGRQ 630

Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
              E +    G  AV  + P++ L  G + +++V+ 
Sbjct: 631 RYDEKNCASQGVLAVS-AWPSTLLEPGEKAEIFVVT 665


>UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfuromonadales
           RepID=A1AKM1_PELPD
          Length = 315

 Score = 52.5 bits (124), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 15/234 (6%)

Query: 17  CSVMAANGTLAPTVVP--MVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74
            +V  +N   A    P  ++     +I +S++  N    P +    + S +  +T     
Sbjct: 30  TTVDTSNEKPAEGEFPTVVLPEAATAIRLSSSDINRIACPSEISEVLTSTEKGITVKITG 89

Query: 75  ASGGVVVATV--------NKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE 126
               V    V        +  P  F +        S+ A P+    +TI+L S L     
Sbjct: 90  KDAFVKFKVVKKGDKFSYSSTPTEFYVVC-GDKVFSMVAFPQRVPSQTIRLSSGLEKKIR 148

Query: 127 EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETL-QAPAGLSSVADAVWTGNH 185
           E  +  +  P+E  ++   + V    +P  +      K  +      L+        G  
Sbjct: 149 ENLSLYSGLPFEKKVLKAIREVYTENIPDSYTINKQEKRFITFKEILLTLKRTVDIEGEG 208

Query: 186 LKMVRFAVENKTLSA-LNIRESDFWQPGT--RAVMFSQPASQLLAGARMDVYVI 236
           L++  +    +  +    + E  F +       +  S     L  G    ++V+
Sbjct: 209 LRIKEYEASLRGATPEFKMNEKMFLRAALAENPIAISLERHILRTGDSSRIFVV 262


>UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LTZ3_SYNAS
          Length = 284

 Score = 51.7 bits (122), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 12/224 (5%)

Query: 27  APTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNK 86
           A   V ++      + +S++  N  T  G+    V S +  +T         V   T  K
Sbjct: 52  AEGAVTVMPEVAQPVELSSSDVNRITCQGEIKDVVYSREKGITVKFSGRDAFVKFRTGLK 111

Query: 87  KPFTFILETE-------RGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYES 139
              +    T             S+ A+P+    R+I+L         +  +   + P+E 
Sbjct: 112 DGKSTYSTTPSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKNRSLFGALPFEK 171

Query: 140 LLVTISQAVRGGKLPAGW-YQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA--VENK 196
            +++  +++   ++P  +    P  +  L     +     AV  G  +++  +   +   
Sbjct: 172 KVLSAIRSLYTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGTLAGG 231

Query: 197 TLSALNIRESDF--WQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
               + + E DF   +  T  +  S     L  G  +  +V+  
Sbjct: 232 DKDRIELGEKDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVES 275


>UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58
           RepID=Q1NGT8_9SPHN
          Length = 255

 Score = 51.7 bits (122), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 79/258 (30%), Gaps = 33/258 (12%)

Query: 4   NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPG-------- 55
              A+I   L       A         +  +    +SI +SN   N     G        
Sbjct: 10  APAALITACLPVPTFAQA---------IMALPDQTSSIRLSNRDINHLVCQGGEIEDVKF 60

Query: 56  --DRIIAVNSLD----GALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109
             ++ IAV              E   +G V   +    P  F + T  G    + A P +
Sbjct: 61  SAEKAIAVEKAGADAWVKFLVKESDDAGQVT-RSYVTAPSEFFV-TCNGAIYPLYAEPSD 118

Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQA 169
              +T+ L           G        E   V+I+ ++   ++P  +  + V+   L  
Sbjct: 119 MPAQTVTLAPGASQRARANGELLGPLVEEERAVSITLSMLQDRVPPSFTDIAVSPRPLTL 178

Query: 170 PAG----LSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF--WQPGTRAVMFSQPAS 223
            A     ++        G  L    + +E    +  +I E  F     G R    +    
Sbjct: 179 SAAPALRITERRRVAIEGTGLSASEYWIE--ASADSDIDERLFLGTAMGARIFSVTLDRL 236

Query: 224 QLLAGARMDVYVIRDGEG 241
            L AG    + ++R GE 
Sbjct: 237 SLRAGESARLILLRRGEA 254


>UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rhodobacter
           sphaeroides 2.4.1 RepID=Q3IUW7_RHOS4
          Length = 239

 Score = 51.3 bits (121), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 68/223 (30%), Gaps = 35/223 (15%)

Query: 35  NGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKK----PFT 90
             G   I+ S       +V GDRI  +     +        +G V +     K    P T
Sbjct: 28  PNGSVRISASAEEVTRISVAGDRIRRIIKDQTSFQEMNDETTGDVFLRYAGDKAKLVPET 87

Query: 91  FILETERGLNLSIQAVPREGAGRTIQLVS-----------------DLRGTGEEAGAWET 133
             + TERG+ +S +  P    G    L+S                 + R  G E    E 
Sbjct: 88  GYILTERGVTISYELTPSARLGAETVLISVAGMPPEGATAGAAPAAEARSEGFELAGGEG 147

Query: 134 STPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAV 193
              Y S LV  ++A              +  +     +  S V     TG   K++   V
Sbjct: 148 GGGYASGLVAFTRATI---------DKHIAGKAAPKRSHGSVVGSESGTGMRAKVI---V 195

Query: 194 ENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
                    +R  DF+      V   + A  L       V V+
Sbjct: 196 AAGGRGGRYVRPQDFYTSKVLGVWVQRNA--LGPSDHAWVVVV 236


>UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1
          Length = 424

 Score = 50.9 bits (120), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 33/252 (13%)

Query: 19  VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGG 78
           V A N       V +  GG   + +S    N  +       +V++   A   +     G 
Sbjct: 157 VEARNRYKEVQRVNVPPGGNVVLPVSRGLQNRISTSFKNA-SVSTSTPAEEASIFVNGGD 215

Query: 79  VVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQL-------VSDLRGTGEEAG 129
           V ++T   KP   +L  ++      ++  VP +  G  I +       +   R T  +  
Sbjct: 216 VFISTNTDKPIGIMLSEDQVPESTYNLTLVPLDVPGAMISVTTSLSPSMQAKRETSLDKQ 275

Query: 130 AWE----------------TSTPYESLLVTISQAVRGGKLPAGWY----QVPVTKETLQA 169
            +E                    ++  ++ +   V  G++P+G+     ++     + Q+
Sbjct: 276 NYEEMLARSQSEELAPSDPKQDDHKQRIIDLLTPVALGEVPSGFSLQQDRLSRIPASEQS 335

Query: 170 PAGLSSVAD--AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLA 227
           P   +  A       G+   +    V+N       + +      G  A      A  L  
Sbjct: 336 PCNFNMYAKLGQRLVGSRELIDVILVKNDKPYGQIVADQQCMAEGVIASALFDKAY-LQP 394

Query: 228 GARMDVYVIRDG 239
           G   ++Y++RD 
Sbjct: 395 GEETELYIVRDK 406


>UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia
           HI2424 RepID=A0B4M8_BURCH
          Length = 159

 Score = 49.4 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 11/158 (6%)

Query: 83  TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE--EAGAWETSTPYESL 140
           T   +  T  +  + G    +  VP       +++      + +  +A A++        
Sbjct: 6   TALNESITVFVIDDAGTTYRLLLVPGPRPAEDVRIEPPAARSTQALQASAFQRRVK---- 61

Query: 141 LVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSA 200
           L+ ++ A   G     +  +       +            ++        + + N + + 
Sbjct: 62  LMMLAMAGGRGAPQLSYTSLDTVVPLWKE---AVLTLVRQYSDGDFIGETYTLSNTSHTD 118

Query: 201 LNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
           + I E + + PG  A+        L AGA   VYV+R+
Sbjct: 119 MAIDERELYAPGVLAIAIENA--NLPAGASTIVYVVRE 154


>UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersinia enterocolitica
           RepID=B0RL12_YEREN
          Length = 262

 Score = 44.4 bits (103), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 45/271 (16%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVP-GDRIIAVNS 63
           N  ++  +L  + +V  A      T   +      ++ +SN   N      G+ +  V S
Sbjct: 2   NKLLLICALSLTSAVATAKVNNISTQRVLPEVST-TVTLSNRDVNRIVCESGEAVKPVFS 60

Query: 64  LD-----GALTNNE---------QTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109
            +         + +         Q+A G    +    +P    L T       +   P+ 
Sbjct: 61  KEKPMKVEIGADRKTFFVKFLFLQSAGGNQYYS----EPTELYL-TCGNATFELIINPQH 115

Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGG------KLPAGWYQ---- 159
            A R + L S    T +E     ++   E     +S +V          LP  + Q    
Sbjct: 116 EAARKVLLGSGTANTIKENQKLFSALSLEETATQLSISVMKDANDSGLGLPPTFEQQAIN 175

Query: 160 -----VPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF----WQ 210
                    +  +  P  L    +    G  LK  +F +  + L  + + E  F    + 
Sbjct: 176 GSWEKASADRRGVAVPIELKKDREVNVEGTGLKATQFTI--RALRNVQLSEMMFLNTRYG 233

Query: 211 PGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241
               A+     +   L+  +M   VI + EG
Sbjct: 234 KNIFAITLESLS---LSSGQMTSLVIIEREG 261


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae Rep...   247   2e-64
UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK...   219   4e-56
UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp...   209   5e-53
UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serrati...   205   1e-51
UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID...   201   2e-50
UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638...   196   6e-49
UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK...   191   2e-47
UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=...   191   2e-47
UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=...   189   8e-47
UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK...   184   3e-45
UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly...   181   2e-44
UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrio...   179   6e-44
UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acineto...   179   8e-44
UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovo...   178   1e-43
UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK...   173   3e-42
UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acineto...   170   3e-41
UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia c...   166   8e-40
UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9...   161   2e-38
UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenopho...   159   5e-38
UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Maripro...   159   8e-38
UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photoba...   158   1e-37
UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax...   155   1e-36
UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatole...   153   5e-36
UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkhol...   152   1e-35
UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 T...   151   2e-35
UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkhol...   151   3e-35
UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly...   150   5e-35
UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax...   148   1e-34
UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythro...   146   7e-34
UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly...   145   1e-33
UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobaci...   144   2e-33
UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosph...   141   2e-32
UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepI...   137   4e-31
UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2            136   8e-31
UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderial...   136   8e-31
UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK...   135   1e-30
UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas Re...   135   1e-30
UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betapro...   133   5e-30
UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=...   133   6e-30
UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus...   126   7e-28
UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingo...   125   1e-27
UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfu...   125   2e-27
UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylo...   122   8e-27
UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingo...   120   3e-26
UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvula...   118   2e-25
UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkhol...   117   3e-25
UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1    117   3e-25
UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candida...   107   2e-22
UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rh...   104   3e-21
UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Perseph...    95   2e-18
UniRef50_C9NP33 Type III secretion system outer membrane pore Ys...    82   2e-14
UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enter...    72   1e-11

Sequences not found previously or not previously below threshold:

UniRef50_C5SIK3 Putative uncharacterized protein n=1 Tax=Asticca...    96   1e-18
UniRef50_A0R7R1 Putative uncharacterized protein n=1 Tax=Pelobac...    96   1e-18
UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersini...    81   3e-14
UniRef50_A0L343 Putative periplasmic protein n=1 Tax=Shewanella ...    73   7e-12
UniRef50_Q1MXI1 Putative uncharacterized protein (Fragment) n=1 ...    73   8e-12
UniRef50_C1SHE4 Putative uncharacterized protein n=1 Tax=Denitro...    67   4e-10
UniRef50_C6CGU4 Type III secretion outer membrane pore, YscC/Hrc...    59   1e-07
UniRef50_Q5ZWU3 Putative uncharacterized protein n=8 Tax=Legione...    54   5e-06
UniRef50_A4V6Q8 Putative exported protein n=1 Tax=Pseudomonas fl...    51   4e-05
UniRef50_Q93PY6 RscC n=2 Tax=Pseudomonas fluorescens RepID=Q93PY...    49   1e-04
UniRef50_Q01723 Hypersensitivity response secretion protein hrpH...    49   2e-04
UniRef50_Q1MY42 Putative uncharacterized protein (Fragment) n=1 ...    42   0.019

>UniRef50_Q46999 TraK lipoprotein n=44 Tax=Enterobacteriaceae RepID=TRAK2_ECOLX
          Length = 242

 Score =  247 bits (631), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 239/242 (98%), Positives = 240/242 (99%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           MRKNNTAIIFG LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA
Sbjct: 1   MRKNNTAIIFGGLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD
Sbjct: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
           LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD+V
Sbjct: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADSV 180

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
           WTGNHLKMVRF VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE
Sbjct: 181 WTGNHLKMVRFVVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240

Query: 241 GN 242
           GN
Sbjct: 241 GN 242


>UniRef50_B5PME8 Type-F conjugative transfer system secretin TraK n=4
           Tax=Enterobacteriaceae RepID=B5PME8_SALET
          Length = 246

 Score =  219 bits (559), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 2/242 (0%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+ N  A +FG+        AA    +P  + +  GGQ  ++ISNT PN+  +PGD++ A
Sbjct: 1   MKNNLPAFLFGTAMMVVMPPAAQ-AQSPATISLPQGGQFRLSISNTDPNMIFIPGDKVTA 59

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           + +  G L +   T +GGV+  +V  + FT  +ET  G   S+ A P +G GR  +L+S 
Sbjct: 60  ITAPGGMLADKRLTTAGGVLFTSVATRTFTIFVETALGQTFSVVATPVKGEGRVYRLMSA 119

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
              +  E   WET+  YE LL+++++AV  G +P G+ +V    + ++ P G S      
Sbjct: 120 EPPSRPETRKWETAQAYEKLLISLNRAVLTGDIPDGYGEVKPLSDGIRLPGGFSVTPLKA 179

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD-G 239
           W G+ L+  R+ + N       +RE DFW+PG RAVMF   A  L+ G RM V VIR  G
Sbjct: 180 WAGDQLRADRYELRNANTWGGALREQDFWKPGVRAVMFDNNAQALMGGGRMTVTVIRGNG 239

Query: 240 EG 241
           EG
Sbjct: 240 EG 241


>UniRef50_A4SUD0 TraK protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
           RepID=A4SUD0_AERS4
          Length = 242

 Score =  209 bits (533), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 86/239 (35%), Positives = 121/239 (50%), Gaps = 6/239 (2%)

Query: 2   RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61
           RK      +  L    +V           +    GG   + ISN +PNL  VPGDR+  +
Sbjct: 4   RKPFHPWRWLPLLV-LAVAPTTMAATAVTLTFSPGGHLDLPISNVNPNLIVVPGDRVTNI 62

Query: 62  NSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDL 121
           +S  G LT+ + T +G  + +T + KPFT  +ET  G   SI A PR   GR+ +L    
Sbjct: 63  SSAAGLLTDKKNTQAGAALFSTASDKPFTLYVETRLGQVFSINATPRATEGRSYRLFPTT 122

Query: 122 RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVW 181
                 A  WET+ PYES+LV +++A     LP G+    + KE     AGL +  D+ W
Sbjct: 123 PTPRPVAKVWETAQPYESMLVALNRA-----LPEGYGPASIDKEAPFTRAGLQATPDSAW 177

Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
            GN L +VR+ + N     + +RE DFW PGTRA+M      +L+AGA   +YVIR  E
Sbjct: 178 DGNALHIVRYRLTNPLSVPVVLREPDFWMPGTRAIMVHPRYQRLIAGASTWLYVIRTQE 236


>UniRef50_D1S163 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13
           RepID=D1S163_SEROD
          Length = 245

 Score =  205 bits (521), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 7/245 (2%)

Query: 1   MRKNNTAIIFGSL-FFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRII 59
           MR     I+ G L  FS SV A+        V   N  Q  + +S+T+PN   V G+ I 
Sbjct: 1   MRLAAPVIVLGILSAFSVSVAASAANRDAKSVYFTNEDQLPVTLSSTNPNKIIVEGELIT 60

Query: 60  AVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119
            +     A      T  G +++A  +   FT  ++T+RG ++S+      G GRT +L+ 
Sbjct: 61  NIYGPGNAYE-ERNTDDGALMIALNSAATFTLYVQTDRGSSVSLNVTAVSGPGRTYELIP 119

Query: 120 D--LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSV 176
               +   E+A AWE S PY   L++I+QAV  G +P  + + PV++    AP  GL   
Sbjct: 120 RSLPKIDNEDAKAWEESQPYVDTLMSIAQAVVNGDVPPDFVEYPVSRAAAYAPPIGLQFF 179

Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
           A+  W G+HL++ R+ ++N +  ++  +E  F+ PG R +  S     L  G +  V+VI
Sbjct: 180 AEKQWIGSHLRVTRYRMKNLSNLSMAFKERQFYVPGVRGISLS--TQSLFPGGQGYVWVI 237

Query: 237 RDGEG 241
              +G
Sbjct: 238 SRFDG 242


>UniRef50_B6ICF3 TraK protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF3_ECOSE
          Length = 259

 Score =  201 bits (511), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/242 (38%), Positives = 132/242 (54%), Gaps = 7/242 (2%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64
            +A+       +C V AA     P  VP+    QA IA+SNT PNL  VPGDRI+AV+S 
Sbjct: 14  LSAVALLCSL-ACGVQAAPSAQLPVRVPVSPDAQARIALSNTQPNLLVVPGDRIVAVDSA 72

Query: 65  DGALTNNEQ-----TASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119
            G  TN         A+GGVV+ T    PFTF + TE GL +S+   P+   GR + L+S
Sbjct: 73  QGTFTNAGDYGQTGMANGGVVLMTEKTTPFTFYVRTEGGLVVSVIGQPQARDGRVVHLMS 132

Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQ-APAGLSSVAD 178
           D     + A  WE S  Y +LLV + +A+  G++P G+   PV  E +   PAGL+  A+
Sbjct: 133 DQPVRQKAAAPWERSHDYVALLVDVQKALLRGEVPPGYVASPVVGEPVFSLPAGLTLRAE 192

Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
            +W+G+ L++ R+ V N+   A  + E  F  PG R+V+ S  A  LL GA  +V+V  +
Sbjct: 193 HMWSGDALRVYRYRVSNRQSEARALPERLFSAPGVRSVLISPWAETLLPGASAEVWVTVE 252

Query: 239 GE 240
            E
Sbjct: 253 QE 254


>UniRef50_A4WGS3 TraK family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS3_ENT38
          Length = 246

 Score =  196 bits (498), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 127/241 (52%), Gaps = 9/241 (3%)

Query: 4   NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63
              A++  S  F+  + AA    AP  +P  N    ++ +SNT+P    V G+ I +++ 
Sbjct: 8   AAAAVLLASGIFTSGLRAAT---APAAIPFENDAAFNVTLSNTNPTKVVVDGELITSISG 64

Query: 64  LDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQL--VSDL 121
             GA  +   T  G ++++ +  + FT  ++T+ G +LS+   P+ G G+T++   +S  
Sbjct: 65  PTGAY-DQSTTDDGALILSPLVGQNFTLFIQTDHGSSLSLNVRPQAGNGKTLRFTPMSPP 123

Query: 122 RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAV 180
               ++A AWE    YE  LV +S+AV  G++P  + + PV++ T   P+  +    +  
Sbjct: 124 LRKNDDAKAWEEGQTYEKTLVALSRAVVNGQVPDDYVEYPVSRMTAYTPSTPVRLTPERQ 183

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
           + GNHL++VRF + N      ++RE DFW  G RAVM SQ  +QL AG     +V+   +
Sbjct: 184 FVGNHLRIVRFRMNNPGSITQSLRERDFWLKGVRAVMLSQ--NQLYAGGEGYAWVVFSDD 241

Query: 241 G 241
           G
Sbjct: 242 G 242


>UniRef50_C8QE99 Type-F conjugative transfer system secretin TraK n=2 Tax=Pantoea
           sp. At-9b RepID=C8QE99_9ENTR
          Length = 245

 Score =  191 bits (485), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 6/241 (2%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+K  + +   +       +A+     P      N       +SNTSPN   + G+ I A
Sbjct: 1   MKKTVSVLTALAALTLVPAVASAVVPGPAGTVFENNAHLKAQMSNTSPNKIVIDGELITA 60

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
           V   +GA T  + TA G +++  +  + FT  +ET  G+++S+   P+ G+GRT++L+  
Sbjct: 61  VTGPEGAYT-KDSTADGALLITPLTGQDFTLFIETAGGVSVSLDVSPKPGSGRTLELIPA 119

Query: 121 --LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQ-APAGLSSVA 177
                   +A AWE S P++  LV++++ V  G +P G+  +  ++      PAG+    
Sbjct: 120 DVPLKPNPDAKAWEESQPFQKTLVSVARTVANGGVPDGYTDMKASRAPAYNPPAGVLLTP 179

Query: 178 DAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
           +    G+HL+++R+ ++N       + E  FWQ G RAVM S     L A     V+VI 
Sbjct: 180 ERQLAGSHLRVMRYRMKNTGYVTRTLSEKQFWQQGVRAVMLS--TRTLYANGEGYVWVIF 237

Query: 238 D 238
            
Sbjct: 238 S 238


>UniRef50_B2VB08 TraK protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB08_ERWT9
          Length = 248

 Score =  191 bits (484), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 8/241 (3%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAP--TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN 62
           N            +    +  + P    +      Q + A S  SPN   V G++I  ++
Sbjct: 3   NKKYFLSPALLIAAAFQTHAAVVPGVKEISFGPNAQVNAAFSQVSPNRIIVQGEKITDIS 62

Query: 63  SLDGALTNNEQTASGGVV-VATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS-- 119
              GA  + +Q   G ++ +A    + FT  + T++   LSI+ +P+   G+T+  V   
Sbjct: 63  GPGGAFDSQKQPDGGALISLAPGVSQSFTLFVVTDKNSALSIEIIPKSIPGKTLSFVPQT 122

Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPA-GLSSVAD 178
                  E  +WE    YE  LV IS+++  G +P  + + PV++    +PA G++  AD
Sbjct: 123 APMKVKPEEKSWEEGQSYEKTLVDISKSIINGVIPQDFSEYPVSRVQAYSPAVGVTLRAD 182

Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
             + G H+++VR+ + N +    ++ E  F+ PG RAVM S     L +      YVI D
Sbjct: 183 KHFIGPHMRIVRYIMNNPSYLNQDLTEKQFYAPGVRAVMLS--TRNLYSHGEGYAYVIFD 240

Query: 239 G 239
            
Sbjct: 241 D 241


>UniRef50_Q4LC34 TraK protein n=1 Tax=Sodalis glossinidius RepID=Q4LC34_SODGL
          Length = 206

 Score =  189 bits (479), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 97/201 (48%), Positives = 136/201 (67%)

Query: 41  IAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLN 100
           + +SNT PNLF+VPGD ++AV+ +D +L     TA+G ++++T+NKKPFTF++ET RGLN
Sbjct: 1   MVLSNTEPNLFSVPGDSVVAVSGIDESLVRYAPTANGALMLSTLNKKPFTFVIETARGLN 60

Query: 101 LSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQV 160
            S++AVP+ G+GRT  LV + +G    A  WE S PYES+LV ++QA+  G+LPAG+ + 
Sbjct: 61  FSLRAVPQAGSGRTFSLVGEGQGVSVAAKVWEQSVPYESMLVALNQALMAGRLPAGYGKA 120

Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQ 220
           P T E L  PAGL + A  VW G+ LK+VRF V N   + + + E DFWQPG  AVMF  
Sbjct: 121 PATHERLPLPAGLWAEALWVWKGHRLKVVRFRVTNPGTTPVRVNEPDFWQPGVWAVMFDT 180

Query: 221 PASQLLAGARMDVYVIRDGEG 241
           P  +++   RM V+V   GE 
Sbjct: 181 PTREIVPAGRMGVWVTLSGEA 201


>UniRef50_A6WUR6 Type-F conjugative transfer system secretin TraK n=6 Tax=Shewanella
           baltica RepID=A6WUR6_SHEB8
          Length = 272

 Score =  184 bits (466), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 100/275 (36%), Gaps = 39/275 (14%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+  N  +      F  SV+AAN    P      +     I +S+   N   V GD+I +
Sbjct: 1   MKIANPLVFAACALFPMSVLAAN--TPPKHYGFNDSETVPIELSSVDINRLVVEGDKITS 58

Query: 61  VNSLDGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118
           ++  +G    T  +   SG   V      PFT  + TE+G +  +   P+     T    
Sbjct: 59  IDCPEGFCVVTGTKSDKSGAARVNLNLAMPFTAYVSTEKGRHFGLFISPKAIPAVTSIF- 117

Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRG----GKLPAGWYQV-------------- 160
           +      E+   ++  TPY +++   +  +      GK   G+                 
Sbjct: 118 TAEHYREEQPSVFDKKTPYPTMMTEFTAQMIRYLATGKPIDGYRVHVVNDDLERTTVDSE 177

Query: 161 --------------PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206
                          + ++ +  PAGL++    V+TG H   + + V N     + +  +
Sbjct: 178 PRGTETSIDDAMFTRLNEQQMPKPAGLTTEPAFVFTGKHFNGIIYRVTNHAALPVTLTTA 237

Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241
            F+ P TRA   S    +L       ++V+  GE 
Sbjct: 238 QFYSPTTRAAALS--TYELAPKQTGHLFVVSGGES 270


>UniRef50_D0Z4T4 IncF plasmid conjugative transfer pilus assembly protein TraK n=2
           Tax=Photobacterium damselae subsp. damselae CIP 102761
           RepID=D0Z4T4_LISDA
          Length = 243

 Score =  181 bits (458), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 18/250 (7%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M K    +   +L F+ +V+A     AP  V   +    S+ +S+   N   V  D+I +
Sbjct: 1   MSKYPAVLGLCALIFAPTVLAT----APNTVLFSDNETVSVNLSSLDINRLVVKDDKITS 56

Query: 61  VNSLDGALT-----------NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPRE 109
           V    G  T                  G  +++    +PFT  + TE+G +  +   P  
Sbjct: 57  VTCPTGFCTMPANPVDESGTGAPVDPQGAGLISLNVLEPFTLYITTEKGRSFGVFVRPLA 116

Query: 110 GAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQA 169
               T   +S  R T ++A  +E  +PY   L  +   +    +P G+    +T +    
Sbjct: 117 VPAITTVFLSTERDT-QKAQEFEKQSPYTQTLAALISHMIKETIPEGFAFQRLTVKKPIE 175

Query: 170 PAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGA 229
            A L     A + G HL  +   + NKT   + +  + F++ G +AV FS  +  +    
Sbjct: 176 QAKLLLTPIASYQGEHLTGISVKISNKTAQYIQVEPTSFYKAGVKAVSFS--SMSIPPHG 233

Query: 230 RMDVYVIRDG 239
            + +Y I+  
Sbjct: 234 SIYMYQIQGR 243


>UniRef50_B6ESX6 Conjugative transfer protein TraK n=7 Tax=Vibrionales
           RepID=B6ESX6_ALISL
          Length = 251

 Score =  179 bits (454), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 13/250 (5%)

Query: 1   MRKNN--TAIIFGSLFFS-CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDR 57
           M+KN     ++  ++  S  S       L     P  +     I +S+ + N   V  D+
Sbjct: 1   MKKNPSQPLVMIAAVLLSFLSFEGRAKNLPSNTYPFNDNDTVPIVLSSLNINRLVVRDDK 60

Query: 58  IIAVNSLDGALT--NNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTI 115
           II ++   G  T   N+Q ASG + +      PFT  + T+ G N ++   PR       
Sbjct: 61  IIGLDCPTGFCTSKGNKQDASGSITLRLNIALPFTAQVTTKNGRNFTLFITPRAIPALVS 120

Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVR----GGKLPAGWYQVPVTKETLQAPA 171
           + +     T +E   +     Y + L   ++++      G L  G+    V   TL    
Sbjct: 121 EFI-GTANTRQEKSVFTRDFDYPTALTQFTKSMMLWSERGFLIDGFSLHHVDPSTLPKDT 179

Query: 172 G-LSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230
             L+ +   V+ G     + + V N++   + +  S F+   TR+   +     LL    
Sbjct: 180 NPLAIIPQTVFVGKEYSGIIYRVLNQSSGQVTLSTSQFYSYSTRSAAIT--KDTLLPNED 237

Query: 231 MDVYVIRDGE 240
           M +Y++  G 
Sbjct: 238 MTLYIVTGGG 247


>UniRef50_B2I3Y8 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
           ACICU RepID=B2I3Y8_ACIBC
          Length = 240

 Score =  179 bits (453), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 80/248 (32%), Gaps = 20/248 (8%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+   + I      F  S+     T A   +   +     + +SNT PN+  V G RI+ 
Sbjct: 1   MKLQLSKI----ALFISSIFLTTSTFAAQHITKADQETVQVTVSNTEPNVLVVDGRRIVN 56

Query: 61  VNSLDG-ALTNNEQTASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGRTIQ 116
           +   D  AL        G +           P T  +  + G    +   PR      + 
Sbjct: 57  LVPSDVTALDTLPDKEQGTLYFKISPYFQNTPITLFVTDDEGTRYKLVLQPRSVGAEEVV 116

Query: 117 LVSDLRGTGEEAGAWETSTPYESLLVTISQAV------RGGKLPAGWYQVPVTKETLQAP 170
           LV    G    AG  + S  Y   +  +   +          L          K  +   
Sbjct: 117 LVPPKPG----AGTSKRSQSYLQQIKELMYVMGDDAENPQETLAVDGISRSFVKAEIPLW 172

Query: 171 AGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230
                V    +  + +    + + N T   +N+ E +F++ G  AV        L  G  
Sbjct: 173 KESKFVLLRRYDTDGMYGEMYQLTNLTNKTMNLLEQEFYRKGVSAVSIQN--LTLSPGRS 230

Query: 231 MDVYVIRD 238
             VYV+R+
Sbjct: 231 TFVYVVRE 238


>UniRef50_A1WDF8 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42
           RepID=A1WDF8_ACISJ
          Length = 245

 Score =  178 bits (451), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 11/240 (4%)

Query: 10  FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL-DGAL 68
             ++    S++A     A  VV   + G   + IS    N   + G RI  V     G L
Sbjct: 9   LSAILLLTSLLA-TEAGATQVVENADRGHVQVNISVNETNRLAIDGRRIANVVPSVKGVL 67

Query: 69  TNNEQTASGGVVVATVNKKP----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT 124
              +  A G       ++ P     T  +  E+G+   +  VPR  AG  I +       
Sbjct: 68  AGQKDEALGAYYFTLASESPNQGTVTVFVSDEKGVTYKLILVPRPVAGEEIIIRPPSEKA 127

Query: 125 GEEAGAWE--TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWT 182
              + A     +  Y+  +  +   +   +L     +     + +        +  A + 
Sbjct: 128 TPSSRAAADGRTVSYQRRIKDLMLVMADDELKDS-VETIQVNKEVPLWKEGRLILVAKYM 186

Query: 183 GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242
              +   ++ + N + S + + E + ++ G RA+        L+ G   D+Y++R+ + N
Sbjct: 187 DGEVVGEKYRLTNVSPSEMLLVEQELYRRGVRAIAVEH--HTLMQGDGTDIYIVRERKDN 244


>UniRef50_D1RMP1 Type-F conjugative transfer system secretin TraK n=2 Tax=Legionella
           RepID=D1RMP1_LEGLO
          Length = 239

 Score =  173 bits (439), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 13/244 (5%)

Query: 4   NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63
           N   +   S  F+ S+ A N       +    G + ++++S+ + N   V G+RI+ V+ 
Sbjct: 2   NALQLFVLSSVFATSLHAGNTV---ATLKFEEGERFALSLSSLNFNRIDVEGERIVKVSF 58

Query: 64  LDGALTNN-----EQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLV 118
            + +         E    G VV+  +   P T    T    + S    P E  G+TI+LV
Sbjct: 59  PEHSFIIEQSKESEDDLDGAVVLKPLAHIPLTVYFTTNLNHHFSATVSPTEDLGKTIKLV 118

Query: 119 SDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVAD 178
           S      + A A E S  Y+     +  A+  G  P+G+ +V +   T +    L     
Sbjct: 119 SKKLKGFDYAKAQEQSQ-YQQS--DLMTALMEGTTPSGFQEVGIKPTTFRLHKHLKVTLV 175

Query: 179 AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
               G       + +EN++   + +  S F  P    +  S+    L        Y I  
Sbjct: 176 KQVRGKESSGYVYRIENQSNKPMELTASLFEHPKLMTMELSEKM--LQPSQTAYFYGIYR 233

Query: 239 GEGN 242
            + N
Sbjct: 234 EQSN 237


>UniRef50_D0SGY8 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii
           SH046 RepID=D0SGY8_ACIJO
          Length = 243

 Score =  170 bits (431), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 80/240 (33%), Gaps = 13/240 (5%)

Query: 10  FGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN-SLDGAL 68
              +  + S++ +    A   V        ++ +S+T  N   V   +I +V  S+  AL
Sbjct: 7   LALIPLTVSLLFSPFAQAVQHVDKAYLDNVTVNVSSTEQNALVVQDRKITSVIPSIADAL 66

Query: 69  TNNEQTASGGVVVA---TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTG 125
              +    G +          +  +  +  ++G    +   P    G   +L+       
Sbjct: 67  EYEKDVTQGVLYFKVAPWYANRTISAFVNDDQGTRYKLVMRPTASLGAE-ELILIPPKVK 125

Query: 126 EEAGAWETSTPYESLLVTISQAV------RGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179
           E +   + S  Y   +  +   +         +L           + +           +
Sbjct: 126 EGSSTDKGSQSYLQQIKELIYVMGDDADDPQDELAIEGISRSFVNQQIPLWKEARMTFAS 185

Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239
            + G+ L    + V N T S L + E +F++    AV        LL G   +VYV+R+ 
Sbjct: 186 RYDGDGLYGEHYKVTNITNSNLILLEQEFYRKKVVAVSIEH--LNLLPGQTTNVYVVRER 243


>UniRef50_B4EQI3 Putative exported protein n=1 Tax=Burkholderia cenocepacia J2315
           RepID=B4EQI3_BURCJ
          Length = 248

 Score =  166 bits (419), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 15/252 (5%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M  N    I  +  F    +AA   L                +S T  N   + G  I  
Sbjct: 1   MFSNLRKWIAAATLFP---IAAANVLPANAATAGASEPREYTVSATEQNRLEIAGRAIKK 57

Query: 61  VNSL-DGALTNNEQTASGGVVVATVNKK----PFTFILETERGLNLSIQAVPREGAGRTI 115
           V     GALT  +   +G    A  N        T  +  ++G    +   PR      I
Sbjct: 58  VVPSHKGALTYVKDKGNGVFYFAFANGGDGMGTETLYVIDDQGATYQLLLQPRRVPSANI 117

Query: 116 QL--VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLP---AGWYQVPVTKETLQAP 170
            +    D  G    A    TS+ Y+S +  +   +   ++              + +   
Sbjct: 118 IVPAAGDAPGRSAAARTAATSSAYQSAIKDLVYEMAAAQVDPSADPAASAVPVHQDVPLW 177

Query: 171 AGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGAR 230
                  D  +  +     ++ + N + S + I E + ++PG   V   Q    L  G  
Sbjct: 178 KEARLTFDTKYVDDTFVGEQYTLTNVSSSDMVIAEQELYRPGVVVVAVEQ--QTLAPGDS 235

Query: 231 MDVYVIRDGEGN 242
             VY++R+   +
Sbjct: 236 TRVYIVRERGRD 247


>UniRef50_A8QYP9 TraK protein n=2 Tax=Legionellaceae RepID=A8QYP9_9GAMM
          Length = 239

 Score =  161 bits (408), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 25/249 (10%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           MRK  +  +      S   M AN       +P+      ++ +S  + N   V  D+II 
Sbjct: 1   MRKPLSVAL---ALISTMTMGANS------IPVKENSDIALTLSQNNYNRIVVKNDKIIE 51

Query: 61  VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
                 ++        G V V      PFT  + TE+G + S+     E  G+TI+LVS 
Sbjct: 52  AVFPPNSMAIKRDEQDGSVYVMLSATNPFTLFVTTEKGTHFSVTLNGEESLGKTIELVSP 111

Query: 121 LRGTGEEAGAWETST--------PYESLLVTISQAVRGGKLPAGWYQVPVTKE---TLQA 169
            +     + A  T               ++ +   +   +    +  V + ++     + 
Sbjct: 112 PQPKVVASQANTTKDNMKTITQEAVPEAILALLTHM---EQHKPFADVRIKRQFGKAQRW 168

Query: 170 PAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGA 229
             GL+ +    W G  LK     + N+    L + +  F + GT A+ FS+P+  +  G 
Sbjct: 169 SKGLTLLPKESWDGKLLKGETIELYNRGKEPLELSQEWFAKVGTLAIKFSKPS--IAPGE 226

Query: 230 RMDVYVIRD 238
           +  +Y ++ 
Sbjct: 227 KAMLYRVQG 235


>UniRef50_D2U002 Conjugal transfer protein TraK n=1 Tax=Arsenophonus nasoniae
           RepID=D2U002_9ENTR
          Length = 227

 Score =  159 bits (403), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 11/232 (4%)

Query: 13  LFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNE 72
           +  S S+ A N T+ P  V         +++SN  PN+  V  DRI+  NS  G L + +
Sbjct: 1   MLISTSIWAENLTVTPHSV-------VRLSVSNREPNVIAVMNDRIVEANSAAGKLADKK 53

Query: 73  QTASGGVVVATVNKKPFTFILETERGLNLSIQAVP-REGAGRTIQLVSDLRGTGEEAGAW 131
            T SG ++  T    PF+  +ETE+G   ++ A+P ++  G  + +++        A  W
Sbjct: 54  ATDSGALIFTTEETTPFSLYIETEKGFGFTVNAIPVKKSQGINVSVMNAEAKADSSAQEW 113

Query: 132 -ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAP--AGLSSVADAVWTGNHLKM 188
            +TS  Y   +     A     +P G+ +         A   A         + G ++++
Sbjct: 114 GKTSDSYSQFITRTFTAAMNDNIPTGFVKNGRVNVNWSASALANFRFRDSVSFQGKNIRL 173

Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
           +R  VENKT   + + E  FW   T A+ F+   + L    ++ ++++   +
Sbjct: 174 LRVNVENKTSQPIQLNERVFWVLQTMAIAFNPTVNTLRPHEQVTLFLLIKEK 225


>UniRef50_Q0F359 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans
           PV-1 RepID=Q0F359_9PROT
          Length = 236

 Score =  159 bits (402), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 77/232 (33%), Gaps = 15/232 (6%)

Query: 19  VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL-DGALTNNEQTASG 77
             A     A  ++   +       IS+  PN   + G  I        G +        G
Sbjct: 4   TAAPTSAFAIQILDAADSDSLVARISDHDPNRIRIAGGFITMAVGPRSGRIAIETDDKRG 63

Query: 78  GVVVATVNKKP-----FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132
            + V      P     FT  L    G + ++   P   +G++  LV   R    +     
Sbjct: 64  QIFVRVNENVPDKHKAFTLFLTDAEGRDYTLLLKPARISGQS--LVIRPRRQRPQVSNPA 121

Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192
                E+ +  + +A+  G +P    ++  T + +    G +   + V       + R+ 
Sbjct: 122 GVEKREARIKRLVRAMALGDVPR-HCEISETDKRVPLWKGTNFHLNRVMRCGDFNVERYR 180

Query: 193 VENKTLSALNIRESDFWQPGTRAVMF------SQPASQLLAGARMDVYVIRD 238
           + N     + + E + +  G  AV        ++ A  +  G    V ++R+
Sbjct: 181 LANSGDKVIRMAEQELYSNGVAAVSVERMHLNAEGAVSIPPGNATMVIIVRE 232


>UniRef50_Q6LW92 Putative uncharacterized protein n=1 Tax=Photobacterium profundum
           RepID=Q6LW92_PHOPR
          Length = 244

 Score =  158 bits (400), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 15/243 (6%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64
              II G      S  A       T     +     + +S+   N   V  D+I  ++  
Sbjct: 7   FAIIIAGC----VSATAHAKNTPGTTYTFNDNDTVPVILSSVDINRLVVKNDKITGIDCP 62

Query: 65  DGAL--TNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122
            G    +  +   SG   +       F   + T++G    +   P+   G T + +  ++
Sbjct: 63  AGFCVVSGTKTDTSGSARLKLNISVAFVAYVSTQKGRQFGMFITPQAIPGITSEFI-GVQ 121

Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRG----GKLPAGWYQVPVTKETL--QAPAGLSSV 176
            T      +E   PY + L   +  +      G++  G+   PV  +T+     A L+ +
Sbjct: 122 NTQHTPSVFEKKAPYTTQLAEFTAQMIRWTNTGEMMGGFSLHPVDPKTVTNTLTARLAVI 181

Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
            D ++ GN    +R+ ++N T +   +  + F+    R+   S    QL       +Y++
Sbjct: 182 PDTIFVGNTFSGIRYKLKNNTTTTQTLTTAQFYSRAARSAALS--TDQLAPNDTAWLYIV 239

Query: 237 RDG 239
             G
Sbjct: 240 TGG 242


>UniRef50_Q0KJJ0 Sex pilus assembly and synthesis protein n=4 Tax=Sphingomonadaceae
           RepID=Q0KJJ0_9SPHN
          Length = 274

 Score =  155 bits (391), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 83/238 (34%), Gaps = 13/238 (5%)

Query: 10  FGSLFFSCSVMA-ANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS----- 63
            G+   +   +  A   LA   V   + G      S       ++ GD+  +V+      
Sbjct: 32  IGAALIALGALGLATPALADQNVMAADNGTVPCVASAKDLTRISLAGDQFASVSKITTGN 91

Query: 64  LDGALTNNEQTASGGVVVATVNKKPFT---FILETERGLNLSIQAVPREGAGRTIQLVSD 120
                    +   G + ++  +  P T   F   T +G         R      +  +++
Sbjct: 92  PAEDFKIVNEPVRGDIYISVPDGFPRTSLSFFGTTRKGFVYKFVCQVRGTEAEQV-FIAN 150

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
              T + A  WE  +  E   V ++QA+  G+   G+       E +     L       
Sbjct: 151 AAITSDRARDWEVQSSPEDAAVRLAQAMYRGEAIDGFDMRSTVLEPVMV-GRLQVQQVGE 209

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
           + G  +K +   V N    A ++ E+     G  A+ F  P S+L AG    VY+I+ 
Sbjct: 210 YRGAEMKGLVLRVRNTGRQAQSLDENMLAARG--ALAFMAPTSELAAGQEAAVYLIQS 265


>UniRef50_Q5NX51 Putative transfer protein traK n=1 Tax=Aromatoleum aromaticum EbN1
           RepID=Q5NX51_AZOSE
          Length = 294

 Score =  153 bits (386), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 4/229 (1%)

Query: 15  FSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74
           F  S+      L    + +  G    + +S    N    P     AV  +   +      
Sbjct: 62  FGSSLSGDVNALKAQTIRVTPGQNEVVNVSMVQANRVGTPFAAPKAVGIIPEGMIVEAVG 121

Query: 75  ASGGVVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE 132
            S  + + + +  P +  +   R     +S+  VP+    +T  L  D+   G +     
Sbjct: 122 QSLYIQMPSTSTDPQSLFVTGSRPNDPVISLILVPQAIPSQTAILQFDVPEPGLQPDQNN 181

Query: 133 TSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA 192
               Y+  L+ + +     ++P G  +  + +   +    L    +  ++   +   R+ 
Sbjct: 182 EPDNYQQRLIQMMRQAAVNQVPVGMSEAALPRAVGRRGP-LLIRPEMRYSSATMDQWRYR 240

Query: 193 VENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241
           VE+ +   + + E+ FW+ G RAV    P+++L  G    VYVI D   
Sbjct: 241 VESISDEEIELDEAAFWERGVRAVAI-LPSTRLRKGDHAYVYVISDKTA 288


>UniRef50_B3DCS7 Type IV secretion system protein n=2 Tax=Burkholderia multivorans
           ATCC 17616 RepID=B3DCS7_BURM1
          Length = 319

 Score =  152 bits (383), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 3/234 (1%)

Query: 7   AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66
            ++ G L      +          V   N G  ++ +S   PN   +P      V++ D 
Sbjct: 84  IVLPGVLTVPGEGIGVPDPSNVQKVSWTNTGNKTVYLSADEPNRILLPFKNAYIVHTSDV 143

Query: 67  ALTNNEQTASGGVVVATVNKKPFTFILE-TERGLNLSIQAVPREGAGRTIQLVSDLRGTG 125
            +   EQ+ +  V       +     +E  + G  L +  VP++   +TI +  D     
Sbjct: 144 QVDKREQSNNVYVYWTNAPSQARHLYIEPPDGGSALGLAIVPKKIPAQTILVTDDTGIVS 203

Query: 126 EEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNH 185
                    + Y S +  +  A+  GK P G+ QV +    + A  GLS+  D  ++   
Sbjct: 204 GRRPKSSPGSEYTSHIQDLMAAIALGKAPDGFSQVDIQLPPI-AMNGLSATVDTRYSSQE 262

Query: 186 LKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239
             +  + V N T S   +RE +F  P   AV    P   LL G +  V V+   
Sbjct: 263 GDLYVYTVRNPTQSRAVLREEEFDGPEVIAVSI-YPKPVLLPGEKTRVIVMARK 315


>UniRef50_Q5ZTS1 Putative conjugative transfer protein TraK n=1 Tax=Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1
           RepID=Q5ZTS1_LEGPH
          Length = 237

 Score =  151 bits (381), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 17/238 (7%)

Query: 12  SLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNN 71
           ++ FS  ++ A    A  +  + N     I  S   PN   +  DRI  + +    L + 
Sbjct: 5   AMIFSLGLLIATAEGA-QIKTVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTLVDA 63

Query: 72  E---------QTASGGVVVAT---VNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVS 119
                        +G +        + + FT  L TE+GL  +++  P+  A +TI   S
Sbjct: 64  CNGKANCKLIDDTTGILTFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIVFKS 123

Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179
             R     A A   ++ YE ++V   +A+  G LP G+ Q      ++            
Sbjct: 124 -YRNPVIRARA-PHTSSYEKVMVGFLRALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRLL 181

Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
              GN ++   F ++N T   ++ +ES F  PGT+ V  ++    L       +Y I 
Sbjct: 182 TVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKT--HLAPFETTRLYRIS 237


>UniRef50_C5ANL8 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1
           RepID=C5ANL8_BURGB
          Length = 246

 Score =  151 bits (380), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 2   RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61
           R     +   +  F     +A        V   +     + +S    NL T+ G R I  
Sbjct: 13  RLMLPLVAPLAALFVAGPASAISI-----VKGADRQAQQVFVSAAEYNLLTMSGGRQITK 67

Query: 62  NSLDGALTNNEQTASGGVVVATVN----KKPFTFILETERGLNLSIQAVPREGAGRTIQL 117
                  +     A         N     +  T  +  + G++  +  VP       +++
Sbjct: 68  VVPTVPGSLAWTQAGNQFWFKPSNPTALNETITIFVFDDAGVSYRLSLVPGPRPAEDVRI 127

Query: 118 VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGK-LPAGWYQVPVTKETLQAPAGLSSV 176
                 TG    A    + ++  +  +  A+ G + +P         +  +      +  
Sbjct: 128 QPPASSTGRALRA----SAFQRHVKLLILAMSGAQSVPQ--VAYTSVETAVPLWKEATLT 181

Query: 177 ADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI 236
               ++   L    + + N + + L++ E + + PG  AV        L AGA   VYV+
Sbjct: 182 RVREYSDGDLVGETYTLANTSHNDLSLDERELYAPGVLAVAIEDA--NLPAGASTIVYVV 239

Query: 237 RDGEGN 242
           R+   +
Sbjct: 240 RERGDH 245


>UniRef50_C9NPU7 IncF plasmid conjugative transfer pilus assembly protein TraK n=1
           Tax=Vibrio coralliilyticus ATCC BAA-450
           RepID=C9NPU7_9VIBR
          Length = 238

 Score =  150 bits (378), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 10/236 (4%)

Query: 5   NTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSL 64
             AI F  L  S +   A+          V+G   ++ ++  S N   V  D+I+ +   
Sbjct: 3   PHAISFVLLSMSLNTALASSASPAQPHLFVSGDTVTLELNQRSLNRLYVDNDKILNLTCP 62

Query: 65  DGALTN--NEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLR 122
                   N    +G +++      PFT  L TE+G  L+++  P +   R  + +    
Sbjct: 63  THQCEVVQNPSDQAGSILLGLSEPHPFTAHLFTEQGRLLALEVQPSDTTTRVHRFIP--- 119

Query: 123 GTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-LSSVADAVW 181
             G+ +     +T     +  +     G +         VT  ++ A  G L     AV 
Sbjct: 120 --GDASHPQTLNTRILGFVKDLMHWSSGEEPSVSMTIARVTHASVMAHRGDLELTPVAVA 177

Query: 182 TGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
               L  + + V N +    +I   DF+ P   A       ++L AG R  +Y+I 
Sbjct: 178 RQGPLSGIIYEVLNTSEGPTSISNRDFYSPSALAASLD--RNELPAGERTRLYLIT 231


>UniRef50_UPI00016ACDC9 hypothetical protein Bpse38_32210 n=1 Tax=Burkholderia
           thailandensis MSMB43 RepID=UPI00016ACDC9
          Length = 206

 Score =  148 bits (374), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 11/207 (5%)

Query: 45  NTSPNLFTVPGDRIIAVN-SLDGALTNNEQTASGGVVVATV----NKKPFTFILETERGL 99
            T  N   + G +I  +     GALT  +  A+G +          +   +  +  +   
Sbjct: 1   MTEQNRLAIDGRKITQIIPKQKGALTYVKDLANGVLYFTFADPDAAQGTESLFVVDDHND 60

Query: 100 NLSIQAVPREGAGRTIQLVSDLRGTGEEAGA-WETSTPYESLLVTISQAVRGGKLPAGWY 158
              +   PR      I + +   G      A    ++ Y+  + ++ + +          
Sbjct: 61  TYQLLLQPRRMPSANIVVPAVGGGEVRRTQAISTRTSSYQFAIKSLLEEMVAAHDDQDAQ 120

Query: 159 ---QVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRA 215
               V    + +          +  +T + L   ++ + N +   + I E + ++ G  A
Sbjct: 121 FSAAVTPVNQMVPLWQEAQLTLELRYTEDDLVGEQYRLTNVSTGDMVIAEQELYRKGVLA 180

Query: 216 VMFSQPASQLLAGARMDVYVIRDGEGN 242
           ++  Q    L  G    VYV+R    +
Sbjct: 181 IVIDQ--QTLAPGDSTAVYVVRGRTDH 205


>UniRef50_Q2N5I0 Putative uncharacterized protein n=5 Tax=Erythrobacter
           RepID=Q2N5I0_ERYLH
          Length = 271

 Score =  146 bits (368), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 72/248 (29%), Gaps = 12/248 (4%)

Query: 2   RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAV 61
           R+ +  +    L      +A     A   V   +       ++        +  D    V
Sbjct: 26  RRPDPGLKLSGLAVIAFALAPVPAHADQFVEAADNATIDCELARGELTRIALIDDGFANV 85

Query: 62  NS-----LDGALTNNEQTASGGVVVATV---NKKPFTFILETERGLNLSIQAVPREGAGR 113
           +               +   G + ++          +F   ++ G      A    G   
Sbjct: 86  SKIASGFPYNDFQVTHEPVRGDIYISVPPQFAAARVSFFATSKAGYVYK-FACRLGGQEA 144

Query: 114 TIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGL 173
           T   +++      EA  WE  T  E   + + +A+    +  G+          +   G+
Sbjct: 145 TQLFITNPALAKSEAAEWEAETGPEDAAIRLIEAMATDAVLPGFT-ARAELSAPRRSGGI 203

Query: 174 SSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDV 233
                A + G+ L   RF V N    +L +        G  A+ F+     L  G     
Sbjct: 204 EVQLVAEYQGDELTGQRFLVRNLGQESLALGSEREGPAG--ALAFAYGRDALAPGEATSA 261

Query: 234 YVIRDGEG 241
           +++    G
Sbjct: 262 FLVFARGG 269


>UniRef50_C3NU46 IncF plasmid conjugative transfer pilus assembly protein TraK n=17
           Tax=Gammaproteobacteria RepID=C3NU46_VIBCJ
          Length = 300

 Score =  145 bits (366), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 79/230 (34%), Gaps = 18/230 (7%)

Query: 22  ANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVV 81
              T  PT + M  G    I ++    N    P +      + D             V V
Sbjct: 56  TVSTDVPTTLLMTPGVNELIPVALGHLNRIVTPFESPQVRTTSDAQTQIK----GNVVYV 111

Query: 82  ATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRG------TGEEAGAWET 133
           AT  + P +  +         LS+  VPR    R I L  D +          +A  WET
Sbjct: 112 ATDKESPVSLYITPPGQEAPALSVTLVPRRIPPREITLAIDGQQWPIKGVVNRKAATWET 171

Query: 134 STPYESLLVTISQAVRGGKLPAGW-----YQVPVTKETLQAPAGLSSVADAVWTGNHLKM 188
           + PY   L  + + +   +LP G+      Q   + +  Q           + TG++  +
Sbjct: 172 AQPYVDSLRDLLRHLALNELPQGYDIRLAGQTDTSPKCFQPGLKFGFKQGQIVTGHYFTV 231

Query: 189 VRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
               VE+     +   E     P   A  +  P + LL G + ++YV+  
Sbjct: 232 YVGLVESFADEPIEASEIACHAPDIVASAY-WPRNILLPGEKTELYVVVR 280


>UniRef50_B7J828 TraK lipoprotein, putative n=1 Tax=Acidithiobacillus ferrooxidans
           ATCC 23270 RepID=B7J828_ACIF2
          Length = 390

 Score =  144 bits (364), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 5/212 (2%)

Query: 29  TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKP 88
             + + +G   SI +S  +PNL   P      + +     T         +VV+T    P
Sbjct: 170 QNIRVHSGKTYSIIVSGVAPNLIETPFRHPEMLVTNSKLAT--PIVHGQNLVVSTTPAFP 227

Query: 89  FTFILETER--GLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQ 146
               +  +      +S+  +P++   +  +L+                + Y   +V + +
Sbjct: 228 VGVYVTGKNPHDPMISLTMIPKKIPPKNYRLIIPGFIPSVAPTVTGQRSGYAQRMVHLMR 287

Query: 147 AVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRES 206
                ++P  + Q              S   +  W GN  ++  ++++N  +  +N+ E+
Sbjct: 288 DAALKQVPENYRQSHKRLALPGPGGAFSWTWEFSWVGNRYRITAYSLKNTLVGPVNLMET 347

Query: 207 DFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
           +F+ PG  +     P   L  G +  V+VI  
Sbjct: 348 NFYAPGVLSASV-YPHHHLYPGEKTQVFVITK 378


>UniRef50_Q2G6C6 Putative uncharacterized protein n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2G6C6_NOVAD
          Length = 252

 Score =  141 bits (355), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 77/225 (34%), Gaps = 14/225 (6%)

Query: 28  PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN-----SLDGALTNNEQTASGGVVVA 82
                  +G      +S      F +  D+  +V+     +         +   G + V+
Sbjct: 31  DQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTNEPVRGDIYVS 90

Query: 83  ---TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYES 139
              T   +  +F   T++G    +     +    T   +++       A  WE+ TP E+
Sbjct: 91  VPETYAARSISFFTTTKKGFVYKVACRVEQIPA-TQVFITNPAIAKNRAADWESQTPIET 149

Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199
             V + QA+   +   G+ +V  +         L     A + G  L      + N+   
Sbjct: 150 SAVRLIQAMANDRTVDGF-EVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAK 208

Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVI--RDGEGN 242
           ++ + E D     T AV  ++P   L  GA    +V+      GN
Sbjct: 209 SVTLAERDLAPRDTLAVSIAEPK--LEPGASTTAFVVGASGETGN 251


>UniRef50_C4NUW8 Truncated TraI n=11 Tax=Gammaproteobacteria RepID=C4NUW8_ECOLX
          Length = 458

 Score =  137 bits (344), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 23/220 (10%)

Query: 43  ISNTSPNLFTVPGDRI--IAVNSLDGALTNNEQTAS-----GGVVVATVNKKPFTFILET 95
           +S + P++     + I   +VN      T+N Q          V VAT  + P T  + T
Sbjct: 225 LSKSGPSIMEAMLEAISGTSVNQPVTGATDNGQCGEVCIKENVVYVATDKQYPVTMFI-T 283

Query: 96  ERGL---NLSIQAVPREGAGRTIQLVSDLRG------TGEEAGAWETSTPYESLLVTISQ 146
           E+G     LS+  VPR    R + L  D            +A  WE S PY   + ++ +
Sbjct: 284 EKGSEAQALSLTMVPRRIPPREVFLKLDGGVGITGAFANTKAETWEQSQPYVETIRSVFR 343

Query: 147 AVRGGKLPAGWYQVPV---TKETLQAPAGLSSVADA--VWTGNHLKMVRFAVENKTLSAL 201
            +  G++P G+    +         A  G+           G+HL +      N +   +
Sbjct: 344 KIALGEVPQGYTLNRIPAGAAVPSCAHPGVKVDFSKGQYMMGHHLNVFIGVALNVSDQPI 403

Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241
             +E+        AV  + P + L  G + ++YV +  + 
Sbjct: 404 EFKEALCGSWDVAAVT-TWPLNVLEPGQKTEIYVAKKQKR 442


>UniRef50_B4RLS2 TraK n=12 Tax=Neisseria RepID=B4RLS2_NEIG2
          Length = 185

 Score =  136 bits (341), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 11/186 (5%)

Query: 65  DGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT 124
           +G L   + T +G + V ++   P    + +E G    +   P    G  I +       
Sbjct: 2   EGDLELQKDTTTGQLFVRSLTSNPTNLFVISEEGKTYLLVLKPTSKQGDNIVIDVAGANR 61

Query: 125 GEEAGAWETSTP---------YESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSS 175
            E A     + P         Y   +  +  ++  G             +T+        
Sbjct: 62  REAAVLASQTGPMPVTMNSTEYVRAIKKMMASMMRGTTGDMGINHSHEYQTVPLWKNTLF 121

Query: 176 VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235
           + +  +T   ++ + F + N     L IRE +F++ G  AV        L  G   DV++
Sbjct: 122 IQNGSYTAADMQGLSFTLTNLGTKQLEIREQEFYRQGVLAVAV--RKQILQPGEITDVFI 179

Query: 236 IRDGEG 241
           I    G
Sbjct: 180 ISRPGG 185


>UniRef50_A2SNK2 Sex pilus assembly protein n=2 Tax=Burkholderiales
           RepID=A2SNK2_METPP
          Length = 305

 Score =  136 bits (341), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 83/222 (37%), Gaps = 15/222 (6%)

Query: 28  PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVN-K 86
             V+ + +       +S++  N  + P D    +++ D       QT    + +   + +
Sbjct: 88  ANVIRVQSDRNEIAYVSSSMANRISTPFDAPRVIDTQDVEY----QTVGQSIYLLPKDPE 143

Query: 87  KPFTFILET--ERGLNLSIQAVPREGAGRTIQLVSDLR-----GTGEEAGAWETSTPYES 139
           KP    +         +S+  VP+    +TI L  D        TG ++     +  Y  
Sbjct: 144 KPVALYITGSNANDPVVSLTLVPKPIPQQTIVLQIDAPLAKGGVTGVDSEPAPVTDVYSE 203

Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199
            L  + + V   K+P G+ +  +       P G+S      ++G    + R+ +      
Sbjct: 204 RLRYLLRQVALNKVPEGFAEGTLPNAAAVLP-GVSIHPMTRYSGPAYDIYRYRIRGTGDQ 262

Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG 241
            + + E  F+  G RAV F  P + +  G    ++V+ D   
Sbjct: 263 -VELAEDAFYTEGVRAVAF-FPTAVIRKGEETTIFVVADKRA 302


>UniRef50_D2U0R3 Conjugative transfer pilus assembly protein TraK n=1
           Tax=Arsenophonus nasoniae RepID=D2U0R3_9ENTR
          Length = 340

 Score =  135 bits (340), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 81/269 (30%), Gaps = 43/269 (15%)

Query: 14  FFSCSVMAANGTL---APTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTN 70
               SVM  N      +   V + +G    I IS   PN    P    + +     ++  
Sbjct: 61  PVPSSVMRNNNQQRLDSRMTVTIHSGENRLIPISVGQPNRIVTPFPEPVVLVIKKNSVKI 120

Query: 71  NEQTASGGVVVATVNKKPFTFILETERG--LNLSIQAVPREGAGRTIQLVSDL------- 121
           +++     + + +  K+P    +  +      +S+   P +       L+          
Sbjct: 121 SKE--GNVIYITSYKKEPIAMYITNKGDESKAISLSLHPEQRPPVEATLLLAKEINTTNS 178

Query: 122 ---------------RGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKET 166
                              E+A  WE S  Y   +  + +A+  G LP G+    +    
Sbjct: 179 NYNNSMYYSPTNASQSANREKAERWEKSDTYAKTITKLLKAIALGDLPTGYEITDLKDTN 238

Query: 167 LQAPAGL------------SSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTR 214
           +  P  L            S        G    ++     N  LS + + ES    P   
Sbjct: 239 VSIPNCLFRTGGDQDNIKYSFKNGQYIAGARFSVIVGVASNTGLSTVLVDESLCTHPRLA 298

Query: 215 AVMFSQPASQLLAGARMDVY-VIRDGEGN 242
           A       + L    + + Y VIR+   +
Sbjct: 299 ARAL-WSNNTLAPNQKTEAYFVIRNDSAS 326


>UniRef50_B7XGQ6 Putative transfer protein n=2 Tax=Pseudomonas RepID=B7XGQ6_PSEPU
          Length = 346

 Score =  135 bits (339), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 30/243 (12%)

Query: 19  VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGD--RIIAVNSLDGALTNNEQTAS 76
            + A    +   V + +G    I IS    N    P D  ++  V++ D +++       
Sbjct: 95  PVPAQPIESRQDVVVSSGTNTLIPISRGQMNRIVTPFDVPKVQTVSTADISVS------G 148

Query: 77  GGVVVATVNKKPFTFILE--TERGLNLSIQAVPREGAGRTIQLVSDLRGTGE-------- 126
             + V T   KP T  +    +  + +S+  +P+        L+      G         
Sbjct: 149 NVLYVTTFEDKPVTMYVTPDDDETVAISLTLLPQGVPPIQANLILAKNVQGLASGLPVTS 208

Query: 127 ------EAGAWETSTPYESLLVTISQAVRGGKLPAGW-----YQVPVTKETLQAPAGLSS 175
                 +A  WE S PY   L ++ + +  GKLP G+               Q       
Sbjct: 209 STNYSGQARKWERSQPYMDTLRSLMREMALGKLPRGYSFGALTNGNKIPACAQPSLSFDF 268

Query: 176 VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235
               +  G+  K+     EN +   +    +    P   AV  + P   L  G + +V+V
Sbjct: 269 SKSQLIEGHDFKVFVATAENVSARTVEFDHASCTHPHRAAVS-AWPDEVLEPGQKTEVFV 327

Query: 236 IRD 238
           I  
Sbjct: 328 ITR 330


>UniRef50_A1W657 Putative uncharacterized protein n=5 Tax=Betaproteobacteria
           RepID=A1W657_ACISJ
          Length = 335

 Score =  133 bits (334), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 26/234 (11%)

Query: 17  CSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTAS 76
           C   A   + AP       G  +  +I+++S N                G +        
Sbjct: 116 CGGGAPAISAAPNTPSSTPGLASPASITSSSVN--------------PAGDVIVECDRDK 161

Query: 77  GGVVVATVNK--KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT----GEEAGA 130
           G V +       +P    + +      ++     +    TI +           G EA  
Sbjct: 162 GEVYIRPAGDALRPINLFVSSA-TATYTLLLRRSDTPADTIVIRDKTPQALRPGGPEAAP 220

Query: 131 WETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVR 190
              +  +   +  +  A+   ++PA   +V    + +Q            + G      +
Sbjct: 221 SGPAPSHVRAMKGLLVAMSSNRVPAD-VRVEEASKPVQLWTEARFTLLRRYEGRGYVGEK 279

Query: 191 FAVENKTLSALNIRESDFWQPGTRA----VMFSQPASQLLAGARMDVYVIRDGE 240
           +A++N +L+ + + E +F +P +RA       +     L  G    VYVIR G 
Sbjct: 280 YALQNVSLAPMVLAEQEFDRPDSRAGGEITGIAIEHHNLRPGETTSVYVIRRGG 333


>UniRef50_Q8KJZ3 Putative uncharacterized protein orf209 n=2 Tax=Enterobacteriaceae
           RepID=Q8KJZ3_PROVU
          Length = 388

 Score =  133 bits (334), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 82/253 (32%), Gaps = 36/253 (14%)

Query: 20  MAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASG-G 78
           +  +   +   + +  G    I IS    N    P +R          L + +    G  
Sbjct: 125 LTDDVIPSRQDIIVEPGVNTLIPISMGQINRIVTPFERPT---IQRLQLDDVKVNVEGNA 181

Query: 79  VVVATVNKKPFTFILETERG--LNLSIQAVPREGAGRTIQLV-----------------S 119
           V V T N +P    +  +    +++S+  VP+  A     L+                  
Sbjct: 182 VYVYTPNSRPVALYISEKGDESVSISVSLVPQRIAPVQATLMLSRKLNNAAVAGGGVSPI 241

Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179
              G+  +A  WE    Y   +  I + V  G +P G+    +T          ++    
Sbjct: 242 MYGGSEAKAKKWEQKDSYVETVRNILRTVALGDIPPGYALGNLTSSVSIPNCNFNTGTVQ 301

Query: 180 VWT-----------GNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAG 228
            +            G+   ++    +N   + + + ES    P   A       + L  G
Sbjct: 302 DYIRYNFNGGQYINGSQFSVIVGIAQNTGPTTVTVDESLCTHPQMAARAL-WSRNTLAPG 360

Query: 229 ARMDVY-VIRDGE 240
            + + Y V+R+G+
Sbjct: 361 QKTEAYFVLRNGQ 373


>UniRef50_Q2LTZ3 Hypothetical exported protein n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LTZ3_SYNAS
          Length = 284

 Score =  126 bits (316), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 77/228 (33%), Gaps = 12/228 (5%)

Query: 23  NGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVA 82
               A   V ++      + +S++  N  T  G+    V S +  +T         V   
Sbjct: 48  TKLPAEGAVTVMPEVAQPVELSSSDVNRITCQGEIKDVVYSREKGITVKFSGRDAFVKFR 107

Query: 83  TVNKKPFTFILETE-------RGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETST 135
           T  K   +    T             S+ A+P+    R+I+L         +  +   + 
Sbjct: 108 TGLKDGKSTYSTTPSEIFVVCGDNVYSLIALPKRIPARSIRLSPGKTENIRKNRSLFGAL 167

Query: 136 PYESLLVTISQAVRGGKLPAGWY-QVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFA-- 192
           P+E  +++  +++   ++P  +    P  +  L     +     AV  G  +++  +   
Sbjct: 168 PFEKKVLSAIRSLYTEEIPESFTVSTPNKRIDLFRDLDIVLARVAVVEGEGIQVKEYRGT 227

Query: 193 VENKTLSALNIRESDFWQP--GTRAVMFSQPASQLLAGARMDVYVIRD 238
           +       + + E DF +    T  +  S     L  G  +  +V+  
Sbjct: 228 LAGGDKDRIELGEKDFLRNEISTDPIAVSLDRLVLKKGEILRAFVVES 275


>UniRef50_Q1N903 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58
           RepID=Q1N903_9SPHN
          Length = 277

 Score =  125 bits (313), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 74/237 (31%), Gaps = 12/237 (5%)

Query: 9   IFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLD--- 65
           I   +      M A+  LA   + + + G      S+      ++  D+   V+ +    
Sbjct: 39  IAAVVGLVGLGMTASPALADQNLLVSDNGTVECVASSKDLTRISLKADKFANVSKVAAAS 98

Query: 66  --GALTNNEQTASGGVVVATVNKKP---FTFILETERGLNLSIQAVPREGAGRTIQLVSD 120
                +   +   G + ++     P    +F   T +G         +   G     V++
Sbjct: 99  ENEDFSVVFEPLRGDIYLSVPEGYPRKALSFFGTTVKGYVYKFSCNVQS-QGAEQIFVAN 157

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV 180
           +                +   + + QA+       G+      +  +Q    L     + 
Sbjct: 158 VDMEKAGQSEQVAGLSDKDRSIELIQAMYRQDALPGFEIRSQDRAPVQV-GSLKVQLVSE 216

Query: 181 WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
           + G  L+  +  +EN +  A+++ +         AV  +     L  G +   +++ 
Sbjct: 217 YVGLELRGKQLLIENVSRKAVDVTDDTVASEDALAVSVTSAR--LEPGQKTTAFIVS 271


>UniRef50_A1AKM1 Putative uncharacterized protein n=2 Tax=Desulfuromonadales
           RepID=A1AKM1_PELPD
          Length = 315

 Score =  125 bits (313), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 15/237 (6%)

Query: 17  CSVMAANGTLAPTVVP--MVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQT 74
            +V  +N   A    P  ++     +I +S++  N    P +    + S +  +T     
Sbjct: 30  TTVDTSNEKPAEGEFPTVVLPEAATAIRLSSSDINRIACPSEISEVLTSTEKGITVKITG 89

Query: 75  ASGGVVVA--------TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE 126
               V           + +  P  F +        S+ A P+    +TI+L S L     
Sbjct: 90  KDAFVKFKVVKKGDKFSYSSTPTEFYVVC-GDKVFSMVAFPQRVPSQTIRLSSGLEKKIR 148

Query: 127 EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETL-QAPAGLSSVADAVWTGNH 185
           E  +  +  P+E  ++   + V    +P  +      K  +      L+        G  
Sbjct: 149 ENLSLYSGLPFEKKVLKAIREVYTENIPDSYTINKQEKRFITFKEILLTLKRTVDIEGEG 208

Query: 186 LKMVRFAVENKTLSA-LNIRESDFWQPGTR--AVMFSQPASQLLAGARMDVYVIRDG 239
           L++  +    +  +    + E  F +       +  S     L  G    ++V+   
Sbjct: 209 LRIKEYEASLRGATPEFKMNEKMFLRAALAENPIAISLERHILRTGDSSRIFVVEQR 265


>UniRef50_A7H3G5 Putative uncharacterized protein n=4 Tax=Campylobacterales
           RepID=A7H3G5_CAMJD
          Length = 270

 Score =  122 bits (307), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 96/272 (35%), Gaps = 44/272 (16%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
           M+K    +I  +L  S S+ A N    P      +    +I +SN+S N   +P   +  
Sbjct: 1   MKK----VILSALTLSTSLFAINVIDNP------SSDIININVSNSSVNRIVLPTQILDV 50

Query: 61  VNSLDGALTNNEQTASGGVVVAT-------------------------VNKKPFTFILET 95
             S +  +          +                               K    F +  
Sbjct: 51  AYSKEKGIDIKISGNQAFIKFLPIQKERVRSVGKDRYEPVGEPEIVYDKAKGSEVFFVTA 110

Query: 96  ERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPA 155
            R    S    P+     T+ +++D     +E   +E+  PY S +  I++++  G +P 
Sbjct: 111 NR--TYSFALNPKNMDAETV-IINDFSAQKDEILKYESDDPYMSTMGKITESILKGGVPQ 167

Query: 156 GWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF-----WQ 210
           G+ +V    + + +   L +     + G   K     V+NKT  A+ +   D+       
Sbjct: 168 GY-KVKKINKVISSDKTLITRELTNYDGLLYKATLLEVKNKTDKAIRLNPKDYISIAKEA 226

Query: 211 PGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242
           P   ++ ++   + LL  ++  + +I  G  N
Sbjct: 227 PKAISIYYNNEVNHLLPYSKAQIIIITKGGRN 258


>UniRef50_Q1NGT8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58
           RepID=Q1NGT8_9SPHN
          Length = 255

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 77/257 (29%), Gaps = 31/257 (12%)

Query: 4   NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVN- 62
              A+I   L                 +  +    +SI +SN   N     G  I  V  
Sbjct: 10  APAALITACLPVPTF---------AQAIMALPDQTSSIRLSNRDINHLVCQGGEIEDVKF 60

Query: 63  SLDGALTNNEQTASGGVVV------------ATVNKKPFTFILETERGLNLSIQAVPREG 110
           S + A+   +  A   V               +    P  F + T  G    + A P + 
Sbjct: 61  SAEKAIAVEKAGADAWVKFLVKESDDAGQVTRSYVTAPSEFFV-TCNGAIYPLYAEPSDM 119

Query: 111 AGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAP 170
             +T+ L           G        E   V+I+ ++   ++P  +  + V+   L   
Sbjct: 120 PAQTVTLAPGASQRARANGELLGPLVEEERAVSITLSMLQDRVPPSFTDIAVSPRPLTLS 179

Query: 171 A----GLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF--WQPGTRAVMFSQPASQ 224
           A     ++        G  L    + +E    S   I E  F     G R    +     
Sbjct: 180 AAPALRITERRRVAIEGTGLSASEYWIEASADSD--IDERLFLGTAMGARIFSVTLDRLS 237

Query: 225 LLAGARMDVYVIRDGEG 241
           L AG    + ++R GE 
Sbjct: 238 LRAGESARLILLRRGEA 254


>UniRef50_A3VN25 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VN25_9PROT
          Length = 243

 Score =  118 bits (295), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 14/223 (6%)

Query: 29  TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGA----LTNNEQTASGGVVVATV 84
            +V   +GG  +  +S +         D   +V   +G      +   + A+G + +   
Sbjct: 23  QIVEASDGGVVTGYVSASGITRLRFTSDAAASVQMAEGGEGAGFSIQHEPATGDLYLTLG 82

Query: 85  NK-------KPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPY 137
                       +F + T  G    ++   +      I++ +      +   A    T  
Sbjct: 83  RLPRQGEAVGAASFFVTTRAGYTYQVELAAKATPSTQIEVRNPDLARRQTERALAE-TSL 141

Query: 138 ESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKT 197
           +  +V +++A+    L  G+          +A   L     A +  + L+       N +
Sbjct: 142 DEEVVALTRAMWASALLDGYEIKRPVVRE-RAAGTLRLAVRATYESDALQGRVLIARNPS 200

Query: 198 LSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE 240
              + I ES F  PG  AV    P   L  GA + V ++  G+
Sbjct: 201 RGDVAIEESLFLAPGVAAVTIQGPR-VLGPGASVPVLIVDRGQ 242


>UniRef50_A0B4M8 Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia
           HI2424 RepID=A0B4M8_BURCH
          Length = 159

 Score =  117 bits (293), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 82  ATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESLL 141
            T   +  T  +  + G    +  VP       +++      + +   A    + ++  +
Sbjct: 5   PTALNESITVFVIDDAGTTYRLLLVPGPRPAEDVRIEPPAARSTQALQA----SAFQRRV 60

Query: 142 VTISQAVRGGK-LPA-GWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLS 199
             +  A+ GG+  P   +  +      +             ++        + + N + +
Sbjct: 61  KLMMLAMAGGRGAPQLSYTSLDTV---VPLWKEAVLTLVRQYSDGDFIGETYTLSNTSHT 117

Query: 200 ALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEGN 242
            + I E + + PG  A+        L AGA   VYV+R+   +
Sbjct: 118 DMAIDERELYAPGVLAIAIENA--NLPAGASTIVYVVRERGDH 158


>UniRef50_Q19NS9 TrhK n=9 Tax=Enterobacteriaceae RepID=Q19NS9_ECOK1
          Length = 424

 Score =  117 bits (293), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 33/252 (13%)

Query: 19  VMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGG 78
           V A N       V +  GG   + +S    N  +       +V++   A   +     G 
Sbjct: 157 VEARNRYKEVQRVNVPPGGNVVLPVSRGLQNRISTSFKN-ASVSTSTPAEEASIFVNGGD 215

Query: 79  VVVATVNKKPFTFILETER--GLNLSIQAVPREGAGRTIQL-------VSDLRGTGEEAG 129
           V ++T   KP   +L  ++      ++  VP +  G  I +       +   R T  +  
Sbjct: 216 VFISTNTDKPIGIMLSEDQVPESTYNLTLVPLDVPGAMISVTTSLSPSMQAKRETSLDKQ 275

Query: 130 AWE----------------TSTPYESLLVTISQAVRGGKLPAGWY----QVPVTKETLQA 169
            +E                    ++  ++ +   V  G++P+G+     ++     + Q+
Sbjct: 276 NYEEMLARSQSEELAPSDPKQDDHKQRIIDLLTPVALGEVPSGFSLQQDRLSRIPASEQS 335

Query: 170 PAGLSSVAD--AVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLA 227
           P   +  A       G+   +    V+N       + +      G  A      A  L  
Sbjct: 336 PCNFNMYAKLGQRLVGSRELIDVILVKNDKPYGQIVADQQCMAEGVIASALFDKAY-LQP 394

Query: 228 GARMDVYVIRDG 239
           G   ++Y++RD 
Sbjct: 395 GEETELYIVRDK 406


>UniRef50_Q6MBA1 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia
           amoebophila UWE25 RepID=Q6MBA1_PARUW
          Length = 230

 Score =  107 bits (268), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 65/209 (31%), Gaps = 11/209 (5%)

Query: 26  LAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG---ALTNNEQTASGGVVVA 82
            A T   +         +S+T  N   +   RI  V + +    ++   E T    +   
Sbjct: 18  SAATYHTLNTTSLLPCYLSSTYQNRVMIENGRIKKVITPESDRLSIQIEELTGQAFIFAR 77

Query: 83  TVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGT-GEEAGAWETSTPYESLL 141
             + K  +  + ++ G+   I     E     + L    +        A E  +     +
Sbjct: 78  DPHLKEISLSVISDSGVIQDIHICFIERQPEVVVLQEPEQKECSPGVPAAEELS-----I 132

Query: 142 VTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSAL 201
           +   Q +  G++P G+    ++ +      G+     A + G+   +  + + N      
Sbjct: 133 LKQVQEIVAGRIPTGYRHKSISSQKRTLKKGIELTLKAKFIGSENTLYLYQLANTGKQPQ 192

Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGAR 230
            + E +     ++        + +     
Sbjct: 193 TVLECEMGSQQSQ--WIYLEQNMIAPKQT 219


>UniRef50_Q3IUW7 Putative uncharacterized protein traK n=1 Tax=Rhodobacter
           sphaeroides 2.4.1 RepID=Q3IUW7_RHOS4
          Length = 239

 Score =  104 bits (259), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 68/233 (29%), Gaps = 35/233 (15%)

Query: 28  PTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKK 87
              +     G   I+ S       +V GDRI  +     +        +G V +     K
Sbjct: 21  DQRLTTRPNGSVRISASAEEVTRISVAGDRIRRIIKDQTSFQEMNDETTGDVFLRYAGDK 80

Query: 88  ----PFTFILETERGLNLSIQAVPREGAGRTIQLVS-----------------DLRGTGE 126
               P T  + TERG+ +S +  P    G    L+S                 + R  G 
Sbjct: 81  AKLVPETGYILTERGVTISYELTPSARLGAETVLISVAGMPPEGATAGAAPAAEARSEGF 140

Query: 127 EAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHL 186
           E    E    Y S LV  ++A              +  +     +  S V     TG   
Sbjct: 141 ELAGGEGGGGYASGLVAFTRATI---------DKHIAGKAAPKRSHGSVVGSESGTGMRA 191

Query: 187 KMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDG 239
           K++   V         +R  DF+      V      + L       V V+   
Sbjct: 192 KVI---VAAGGRGGRYVRPQDFYTSKVLGVWVQ--RNALGPSDHAWVVVVEKR 239


>UniRef50_C5SIK3 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus
           CB 48 RepID=C5SIK3_9CAUL
          Length = 236

 Score = 96.0 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 11/211 (5%)

Query: 36  GGQASIAISNTSPNLFTVPGDRIIAVNSLDGA----LTNNEQTASGGVVVAT---VNKKP 88
           G QA + +S++  +   + G+RI  V ++ G     L   +   +G V V      + + 
Sbjct: 27  GDQALLQVSSSQMSRIHIQGERIATVRTIQGGDGAELLIEKDETTGDVYVGFDGDTSGQS 86

Query: 89  FTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWE-TSTPYESLLVTISQA 147
           F+  L TE G  +     P +   +T +L  +   +     A +     Y   +    + 
Sbjct: 87  FSAFLTTESGKTVQATFHPVDDTAKTFELKLEGTLSASSPAALQFKRNGYPETMAAFVKL 146

Query: 148 VRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESD 207
           +     P G       +                     +       +N +     +    
Sbjct: 147 MFNPDRPDGVV-CRQGRAQPTQTTNFRVWTIERCDAEGIAGTVLHFKNISTVPQTLSADG 205

Query: 208 FWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
           F      AV  +     L  G    VY++ +
Sbjct: 206 FLVRQVLAVGITDE--LLSPGEEARVYIVEE 234


>UniRef50_A0R7R1 Putative uncharacterized protein n=1 Tax=Pelobacter propionicus DSM
           2379 RepID=A0R7R1_PELPD
          Length = 332

 Score = 95.6 bits (236), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 78/284 (27%), Gaps = 46/284 (16%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTV------------------------------ 30
           MRKN+   +   L       A+      TV                              
Sbjct: 1   MRKNSMYALIALLLIPSMTCASEAKFPKTVHREGKVGHKLVSLRETGNEGKADLKVDNTP 60

Query: 31  VPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVATV------ 84
           V ++      + ++N   N      +    V   +  +          V    V      
Sbjct: 61  VVVIPEVSTVVFMNNRDVNRIVCHEEIKDLVFLRENGIAAKVTGKDAFVNFKFVKEGDAM 120

Query: 85  --NKKPFTFILETERGLNLSIQAVPRE-GAGRTIQLVSDLRGTGEEAGAWETSTPYESLL 141
               KP    +        ++  VP+     +T++L S L    +         P+E  +
Sbjct: 121 LHASKPSEMYVVC-GENTYNLIIVPKPDVPPQTVRLSSGLEKKIKANAEMYDGLPFEKKV 179

Query: 142 VTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA--VWTGNHLKMVRFA-VENKTL 198
           +   + V   ++   +    V K+       ++ +        G  L++  +  +  +  
Sbjct: 180 IKSIKDVYTDQIAESYSIEEVGKQIGN-WQEITIIHKKNVNVEGEGLRVKEYEAILKQGQ 238

Query: 199 SALNIRESDFWQPGTR--AVMFSQPASQLLAGARMDVYVIRDGE 240
               + E  F +       V  S     L  G  + ++V+   +
Sbjct: 239 VPFKLSEKIFTKKQFADNPVAISIEKHVLRPGETVRIFVVEQRQ 282


>UniRef50_C0QUX3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1
           RepID=C0QUX3_PERMH
          Length = 252

 Score = 94.8 bits (234), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 20/211 (9%)

Query: 7   AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDG 66
            ++  +LF      A           +  G    + +SN   N+   P +++    S   
Sbjct: 5   KVLILALFIVSFSFAKE--------LVYEGKPLLLDVSNQVSNIIEFP-EKVKKAISASQ 55

Query: 67  ALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGE 126
            L+   Q     V+V   +K+P   ++ T+ G   ++   P+    + +++V       +
Sbjct: 56  QLSAKIQ--GNKVIVLLPSKEPADLLVSTKSGKVYALLLNPKIIPTQIVKIVDKQIEEEK 113

Query: 127 EAGAW-------ETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADA 179
           +  A        E    YE  L+ I +A   G+L   +Y+V    +TL+           
Sbjct: 114 KKKAKKEKVKQIEKGKDYEEKLINILKAAINGQL-DDYYEVKRKVQTLETQNYF-IEITK 171

Query: 180 VWTGNHLKMVRFAVENKTLSALNIRESDFWQ 210
            + G+   ++   +  K   A  I E    Q
Sbjct: 172 EYQGDEFGVLLGKIYPKKKDAKPITERLLAQ 202


>UniRef50_C9NP33 Type III secretion system outer membrane pore YscC n=1 Tax=Vibrio
           coralliilyticus ATCC BAA-450 RepID=C9NP33_9VIBR
          Length = 686

 Score = 81.7 bits (200), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 2/97 (2%)

Query: 143 TISQAVRGGKLPAGWYQVPVTKETLQAPAGLS-SVADAVWTGNHLKMVRFAVENKTLSAL 201
              +++  G +P G+ +  + +   +    L+    D  + G    ++   + N +    
Sbjct: 571 DALRSLIKGYIPNGFEKGKLAEPHCRKDVILTKFAKDDQYIGPEFNIIAGTIYNPSSGRQ 630

Query: 202 NIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRD 238
              E +    G  AV  + P++ L  G + +++V+  
Sbjct: 631 RYDEKNCASQGVLAVS-AWPSTLLEPGEKAEIFVVTK 666


>UniRef50_B0RL12 Putative uncharacterized protein n=1 Tax=Yersinia enterocolitica
           RepID=B0RL12_YEREN
          Length = 262

 Score = 81.3 bits (199), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 74/262 (28%), Gaps = 31/262 (11%)

Query: 7   AIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVP-GDRIIAVNSLD 65
            ++        S +A       +   ++     ++ +SN   N      G+ +  V S +
Sbjct: 3   KLLLICALSLTSAVATAKVNNISTQRVLPEVSTTVTLSNRDVNRIVCESGEAVKPVFSKE 62

Query: 66  GALTNNEQTASGGVVVAT----------VNKKPFTFILETERGLNLSIQAVPREGAGRTI 115
             +            V               +P    L T       +   P+  A R +
Sbjct: 63  KPMKVEIGADRKTFFVKFLFLQSAGGNQYYSEPTELYL-TCGNATFELIINPQHEAARKV 121

Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGK------LPAGWYQ---------V 160
            L S    T +E     ++   E     +S +V          LP  + Q          
Sbjct: 122 LLGSGTANTIKENQKLFSALSLEETATQLSISVMKDANDSGLGLPPTFEQQAINGSWEKA 181

Query: 161 PVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDF--WQPGTRAVMF 218
              +  +  P  L    +    G  LK  +F +    L  + + E  F   + G      
Sbjct: 182 SADRRGVAVPIELKKDREVNVEGTGLKATQFTIR--ALRNVQLSEMMFLNTRYGKNIFAI 239

Query: 219 SQPASQLLAGARMDVYVIRDGE 240
           +  +  L +G    + +I    
Sbjct: 240 TLESLSLSSGQMTSLVIIEREG 261


>UniRef50_A0L343 Putative periplasmic protein n=1 Tax=Shewanella sp. ANA-3
           RepID=A0L343_SHESA
          Length = 405

 Score = 73.2 bits (178), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 78/255 (30%), Gaps = 48/255 (18%)

Query: 29  TVVPMVNGGQASIAISNTSPNLFTVPGD--RIIAVNSLDGALTNNEQTASGGVVVATV-N 85
            V+ +  GG  ++ IS ++ N         +I      D AL        G V V    N
Sbjct: 138 QVIALKAGGTTTLPISLSTTNRIATSFKNAKITTSVPSDAALVY---GEQGFVYVTPGVN 194

Query: 86  KKPFTFILETERG--LNLSIQAVPREGAGRTIQL-------------------VSDLRGT 124
                 I+E +      +S+  VP       ++L                     +    
Sbjct: 195 AGAIDLIVEEDGAPETAVSLYLVPLNVPPVLVELTVSYNASQRNAALQAVSIYSENEAKE 254

Query: 125 GEEAGAWET---------STPYESLLVTISQAVRGGKLPAGWY--QVPVTKETLQAPAGL 173
            E A   E          +  +   ++T+ + V   ++PAG+   +       ++ P  +
Sbjct: 255 LESAKQAERERITNNQPVADSHVDDVMTLLEVVAKAEVPAGYELLEGDTIPAEVRYPCDI 314

Query: 174 SS------VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPG---TRAVMFSQPASQ 224
                          G+ L +    V N      + R+     PG     AV      + 
Sbjct: 315 RQMLPLYHEVKQRLIGSKLVVDIMEVRNDVNGLRSFRDEACMGPGREDVMAVGV-LDKAT 373

Query: 225 LLAGARMDVYVIRDG 239
           L      +VY++RD 
Sbjct: 374 LGPRESTEVYILRDR 388


>UniRef50_Q1MXI1 Putative uncharacterized protein (Fragment) n=1 Tax=Bermanella
           marisrubri RepID=Q1MXI1_9GAMM
          Length = 141

 Score = 72.8 bits (177), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 9/146 (6%)

Query: 4   NNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNS 63
           NN  +       S +        +     + +G    I +S+       +   R+     
Sbjct: 2   NNIVVFLLVALISSTAF------SIQTYSVSDGDSIQIKVSSKDLTRIRMDSGRLDGAWG 55

Query: 64  LDGALTNNEQTASGGVVVATVNKKPFT--FILETERGLNLSIQAVPREGAGRTIQLVS-D 120
           LD   T+    + G + V      P T  F ++   G   S+ AV       T+ L S D
Sbjct: 56  LDENFTHKADRSKGEIFVRPKPGAPTTSSFFIKDGNGSVYSVTAVQHAIPSDTVVLKSLD 115

Query: 121 LRGTGEEAGAWETSTPYESLLVTISQ 146
                + + +   ++     +  + +
Sbjct: 116 YTAKRDSSQSSRKASSDVKRIKRLVK 141


>UniRef50_Q2VP23 TraK-X deletion and fusion protein n=8 Tax=Enterobacteriaceae
          RepID=Q2VP23_ECOLX
          Length = 198

 Score = 72.5 bits (176), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 1  MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA 60
          M+ N  A++ G+     S +      +P  +     GQ  ++ISNT PN+  +PGD++ A
Sbjct: 1  MKNNFPALLLGTALMITSPVTVY-AQSPATLSFPQRGQFRLSISNTDPNMIFIPGDKVTA 59

Query: 61 VNSLDGALTNNEQTASGGVVVATVNK 86
          + + +G L +   T++GGV+  +V  
Sbjct: 60 ITAQNGMLADKRLTSAGGVLFTSVAN 85


>UniRef50_C1SHE4 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus
           DSM 12809 RepID=C1SHE4_9BACT
          Length = 237

 Score = 67.4 bits (163), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 25/227 (11%)

Query: 29  TVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTNNEQTASGGVVVA------ 82
               +      +I +S +  N    P        S +  +T      +  +         
Sbjct: 18  ATTGIEPEVVTTIEMSRSDMNRIVCPYPITDFATSKENNMTYKISGNNLFIKFPVIAVTK 77

Query: 83  ---TVNKKPFTFILE---TERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTP 136
               + KK F    E          S+     +    T+ L SD  G  ++A  +  S  
Sbjct: 78  DGELIEKKYFNGYAEVHLVCGDAVYSLILQAEQKKTETVYL-SDTAGKMKKANEYVRSKS 136

Query: 137 YESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENK 196
           YE L+    QA+   K    +Y     ++      G+      V  G    +    +E  
Sbjct: 137 YEDLITEFIQALIENKPLNDFYMDESDEKETYR--GIDISVSRVMVGGGYVVKELILE-- 192

Query: 197 TLSALNIRESDFWQ----PGTRAVMFSQPASQLLAGARMDVYVIRDG 239
           +   +++ +++  +       +AV    P            YV++  
Sbjct: 193 SKEKVSLTDTELLKLRMLSNVKAVALLSPTFA----GITKAYVVQGK 235


>UniRef50_C6CGU4 Type III secretion outer membrane pore, YscC/HrcC family n=19
           Tax=Gammaproteobacteria RepID=C6CGU4_DICZE
          Length = 691

 Score = 59.4 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 12/104 (11%)

Query: 140 LLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNH--------LKMVRF 191
            +    + +  G+ PAG+    +            +     +  +         L +   
Sbjct: 574 TVENALRDLASGQTPAGFT---IDGSGPTLSEICRTSPSMSYQSHRHQWYSNLSLSLTVG 630

Query: 192 AVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235
            V+N     L   E+      T AV  + P + L  G   +VY+
Sbjct: 631 VVKNTGTQPLRFDEASCANSRTLAVA-AWPKTTLAPGESTEVYL 673


>UniRef50_Q5ZWU3 Putative uncharacterized protein n=8 Tax=Legionella
           RepID=Q5ZWU3_LEGPH
          Length = 278

 Score = 53.6 bits (127), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 83/259 (32%), Gaps = 32/259 (12%)

Query: 2   RKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPN--LFTVPGDRII 59
           R+N   +I   L     ++        +   +      +I +     N     V   + I
Sbjct: 17  RRNPMKLIKHMLLIIGFMLTQVSYALQSEHLVWEKVPLTIEL---PINKERL-VQFPQAI 72

Query: 60  AVNSLDGALTNNEQTASGGVVVA---TVNKKPFTFILETERGLNL-SIQAVPREGAGRTI 115
            +     +   +     G + +    T N       L  E  + + +++A  +      I
Sbjct: 73  KIIDQQLSTNLDILKVKGSLYLKAKDTFNDARLIAQLLPEGEVIILNLKANEKAVNTTPI 132

Query: 116 QLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGG--------KLPAGWYQVP-VTKET 166
           +++ D      ++ A +    YE   + +++              +P G Y+ P  T +T
Sbjct: 133 EILIDDPKVTHQSSASQ----YEYNAIQLTRFAIQALYSPERVRDIPEGIYRSPMQTNKT 188

Query: 167 LQAPAGLSS--VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQ-PGTRAVMFSQPAS 223
           +    G S      A W G  L +    ++N     + +    F +  G        P S
Sbjct: 189 IPLFYGASIEAHPLASWRGGSLYVTAVDLKNLLNQPVKL---QFSKLMGHWQTASFYPKS 245

Query: 224 QLLA---GARMDVYVIRDG 239
           +L          V+V+ D 
Sbjct: 246 ELPPRNQHESTTVFVVSDQ 264


>UniRef50_A4V6Q8 Putative exported protein n=1 Tax=Pseudomonas fluorescens SBW25
           RepID=A4V6Q8_PSEFS
          Length = 264

 Score = 50.9 bits (120), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 73/253 (28%), Gaps = 24/253 (9%)

Query: 1   MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNL-FTVPGDRII 59
           M+K   A +     F+  V A           +       + ISN +       P   ++
Sbjct: 1   MKKTILAAMVAVA-FASPVFADEECNRSPRSVIYENSPVDVYISNDNQRAEVVFPETYLL 59

Query: 60  AVN-SLDGALTNNEQTASGGVVVATVNKKPFTFI-LETERGLNLSIQAVPREGAGRTIQL 117
            VN      L          +   T + +    + ++   G +  +  + R G   ++  
Sbjct: 60  GVNREQPVGLELFPTPIKNKLAFNTTDGQYVGLVTVDGPSGQSYQVNLIARPGCADSLVT 119

Query: 118 VSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTK-----ETLQAPAG 172
           +S          A +        +  +   +  G +P G+ +   +K       +     
Sbjct: 120 ISHQAPVDRSQLAKDGK----GRVKGLMNYLFDGTVPNGYRKNSFSKLTKEQRVVFRQGS 175

Query: 173 LSSVADAVWTGNHLKMVRFAVENKTLSA--LNIRESDFWQPGT-------RAVMFSQPAS 223
           +     +   G       + V N+  +A  L I + D+            R V     + 
Sbjct: 176 VEFSLQSQVIGPTYVGTTYEVVNRGRTAFKLAIDQIDYSNKAVVDSIGTARQVAMLPTSH 235

Query: 224 QLLAGAR--MDVY 234
            L        +VY
Sbjct: 236 ILGPSPEYITEVY 248


>UniRef50_Q93PY6 RscC n=2 Tax=Pseudomonas fluorescens RepID=Q93PY6_PSEFL
          Length = 713

 Score = 49.3 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 6/102 (5%)

Query: 139 SLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAG-----LSSVADAVWTGNHLKMVRFAV 193
           S ++T    +  G++P  +    +        +      L++     + G    +    +
Sbjct: 586 SDIITTLARLVSGEVPKAFNAARMPLGLNTLCSTRDLLALNTERSQWYAGPDYNVAVVVL 645

Query: 194 ENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYV 235
            N+    + I E +     T AV    P + L  G   +V++
Sbjct: 646 RNQFKRNVRIDEKECSNSQTLAVTV-WPRAWLKPGEEAEVFI 686


>UniRef50_Q01723 Hypersensitivity response secretion protein hrpH n=16
           Tax=Pseudomonas RepID=HRPH_PSESY
          Length = 701

 Score = 48.6 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 32/126 (25%), Gaps = 7/126 (5%)

Query: 120 DLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTK----ETLQAPAGLSS 175
           D +    +        P    +  +   +  G  P G +                 GLS 
Sbjct: 557 DDQMKRIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLPFETDSLCDPGQGLSL 616

Query: 176 --VADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDV 233
                  +      +      N T   + I ES         V  + P + L  G   +V
Sbjct: 617 DGQRSQWYARKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGVA-AWPHAWLQPGEESEV 675

Query: 234 YVIRDG 239
           Y+    
Sbjct: 676 YIAVRQ 681


>UniRef50_Q1MY42 Putative uncharacterized protein (Fragment) n=1 Tax=Bermanella
           marisrubri RepID=Q1MY42_9GAMM
          Length = 65

 Score = 42.0 bits (97), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 22/63 (34%)

Query: 178 DAVWTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIR 237
              + G   +   +A+ N         ES+F   G           +++      +YV+R
Sbjct: 3   VDSYVGRDFEGEVYAIRNSDEKDHVFHESEFRNFGEHVRFAGLDKLKIVPNETTTLYVVR 62

Query: 238 DGE 240
           + +
Sbjct: 63  EAK 65


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.307    0.129    0.307 

Lambda     K      H
   0.267   0.0396    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,015,390,632
Number of Sequences: 3077464
Number of extensions: 31598798
Number of successful extensions: 105541
Number of sequences better than 1.0e-01: 67
Number of HSP's better than  0.1 without gapping: 86
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 105195
Number of HSP's gapped (non-prelim): 153
length of query: 242
length of database: 1,040,396,356
effective HSP length: 125
effective length of query: 117
effective length of database: 655,713,356
effective search space: 76718462652
effective search space used: 76718462652
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 91 (39.7 bits)
