Phyre 2 alignment of P41066 with c2h6oA_

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Job Description | P41066
Confidence | 14.47% | Date | Thu Jan 5 12:01:23 GMT 2012
Rank | 18 | Aligned Residues | 50
% Identity | 28% | Template | c2h6oA_
PDB info | PDB header:viral protein | Chain: A: PDB Molecule:major outer envelope glycoprotein gp350; | PDBTitle: epstein barr virus major envelope glycoprotein
Resolution | 3.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | V | P | G | D | R | I | I | A | V | N | S | L | D | G | A | L | T | N | N | E | Q | T | A | S | G | G | V | V | V | A | T | V | N | K | K | P | F | T | F | I | L | E | T | . | . | . | E | R | G | L | N | L | S | I | Q | A | V | P | R | E | G | A | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | L | P | G | D | N | K | F | N | I | T | C | S | G | . | . | . | . | Y | E | S | H | V | P | S | G | G | I | L | T | S | T | S | P | . | . | . | . | . | . | . | V | A | T | P | I | P | G | T | G | Y | A | Y | S | L | R | L | T | P | R | P | V | S | R
Template Known Secondary structure |  |  |  | S | S |  |  |  |  |  | B |  |  | S | B | . | . | . | . | S |  |  | S | S |  |  |  |  |  |  |  |  |  | S |  | . | . | . | . | . | . | . | S | S |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . |  |  |  |  | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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