Phyre 2 alignment of P61889 with c2i3aD_

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Job Description | P61889
Confidence | 96.57% | Date | Thu Jan 5 12:07:26 GMT 2012
Rank | 215 | Aligned Residues | 79
% Identity | 22% | Template | c2i3aD_
PDB info | PDB header:oxidoreductase | Chain: D: PDB Molecule:n-acetyl-gamma-glutamyl-phosphate reductase; | PDBTitle: crystal structure of n-acetyl-gamma-glutamyl-phosphate reductase2 (rv1652) from mycobacterium tuberculosis
Resolution | 2.15 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . |  |  |  | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | K | V | A | V | L | G | A | A | G | G | I | G | Q | A | L | A | L | L | L | K | . | . | . | T | Q | L | P | S | G | S | E | L | S | L | Y | D | I | A | P | V | T | P | G | V | A | V | D | L | S | H | I | P | T | A | V | K | I | K | G | F | S | G | E | D | A | T | P | A | L | E | G | A | D | V | V | L | I | S | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | K | V | A | V | A | G | A | S | G | Y | A | G | G | E | I | L | R | L | L | L | G | H | P | A | Y | A | D | G | R | L | R | I | G | A | L | T | A | A | T | S | A | . | G | S | T | L | G | E | H | H | P | H | L | T | P | L | A | H | R | V | V | E | P | T | E | A | A | V | L | G | G | H | D | A | V | F | L | A | L
Template Known Secondary structure |  |  |  |  |  |  |  | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  | S | T | T |  | . | S | S | B | G | G | G | T |  | T | T |  | G | G | G | T | T |  | B |  | B |  |  |  |  |  |  |  |  | S |  | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |  | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .
|  | 78 | . | 80
Predicted Secondary structure |  |  |  |
Query SS confidence |  |  |  |
Query Sequence |  | G | V | A
Query Conservation |  |  |  |
Alig confidence |  |  |  |
Template Conservation |  |  |  |
Template Sequence |  | P | H | G
Template Known Secondary structure |  |  | T | T
Template Predicted Secondary structure |  |  |  |
Template SS confidence |  |  |  |
|  | 89 | 90 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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