183 c3k54A_ Probab=94.48   E-value=0.26  Score=25.19  Aligned_columns=144  Identities=17%

Q ss_pred             CCCCCCEEEEECCCCCCCEEEEEEE-CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEE
Q ss_conf             0887610457617875003799997-890199982886708899999999998741488667604520676550266653
Q batch____        13 LGEGEIELRNELPGGEVHAAWHLRY-AGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMD   91 (286)
Q Consensus        13 ~g~~~i~~v~~l~gG~~n~vy~v~~-~~~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~~~p~~~~~~~~~~~~~~~~~   91 (286)
                      ......+-.+.|+.|....||+.+. +++.|.+|+-..     +.+|+..|..+   ..+.+...+...........+++
T Consensus         6 i~~~~~~~~~~iG~G~fG~V~k~~~~~~~~vAiK~ik~-----~~~Ei~~l~~l---~hpniv~~~~~~~~~~~~~~v~~   77 (243)
T c3k54A_           6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE-----FIEEAKVMMNL---SHEKLVQLYGVCTKQRPIFIITE   77 (243)
T ss_dssp             CCGGGEEEEEEEESTTSSCEEEEEETTTEEEEEEECCC-----CTTHHHHHHHC---CCTTBCCEEEEECSSSSCEEEEE
T ss_pred             ECHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEHHH-----HHHHHHHHHHC---CCCCCCCCCCCEEECCCCCCCCE
T ss_conf             07888589877754188489999998999999873778-----99999999861---89863422673031375422210


Q ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             03787653013322222799998643100012344555576644556656657887763104888656424899489999
Q batch____        92 YLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDA  171 (286)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (286)
                      ...+..                                                        ..................
T Consensus        78 ~~~~~~--------------------------------------------------------l~~~~~~~~~~~~~~~~~  101 (243)
T c3k54A_          78 YMANGC--------------------------------------------------------LLNYLREMRHRFQTQQLL  101 (243)
T ss_dssp             CCTTEE--------------------------------------------------------HHHHHHCGGGCCCHHHHH
T ss_pred             EECCCC--------------------------------------------------------CCCCCCCCCCCCCHHHHH
T ss_conf             102455--------------------------------------------------------332112234578876756


Q ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCE-EEEECCH--HCCCCHHH
Q ss_conf             9999897411113886788547877716897892-7997521--20689999
Q batch____       172 IVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDG-PYIFDPA--CYWGDREC  220 (286)
Q Consensus       172 ~~~~l~~~l~~~~~~~~liHgDl~~~Nil~~~~~-~~iID~e--~~~gd~~~  220 (286)
                      ..................+|.+..+.|++...++ +.+.||.  +.+..+..
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~~~  153 (243)
T c3k54A_         102 EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGFPVRWSPPEV  153 (243)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCCCCCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCC
T ss_conf             7888877665542100122222222222223442125522400022222222