18/01/2012 03:48:57 : INFO  : Run start: Wed Jan 18 03:48:56 GMT 2012
18/01/2012 03:49:02 : INFO  : Initialised job
18/01/2012 03:49:04 : INFO  : Renaming log file 'phyre2_20120118_034856.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/f9e8c21fa367e305/phyre_20120118_034856.log'
18/01/2012 03:49:05 : INFO  : Initialised job:
Sequence
>batch____
MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPEHM
HCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINP
VKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAGERIIS

18/01/2012 03:49:06 : INFO  : Checked sequence
18/01/2012 03:49:08 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 03:49:09 : INFO  : PSI-BLAST 3 iterations
18/01/2012 03:50:13 : INFO  : PSI-BLAST 5 iterations
18/01/2012 03:51:25 : INFO  : Finished PSI-BLAST
18/01/2012 03:51:27 : INFO  : Running Buildali to generate a3m file
18/01/2012 03:56:17 : INFO  : Converting to HMM
18/01/2012 03:56:19 : INFO  : Calibrating HMM
18/01/2012 03:56:31 : INFO  : Searching HMM database
18/01/2012 04:00:21 : INFO  : Finished buildali
18/01/2012 04:00:23 : INFO  : Predicting secondary structure
18/01/2012 04:00:30 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 04:00:31 : INFO  : Predicting Disordered regions
18/01/2012 04:00:35 : INFO  : Predicted Disorder (Disopred)
18/01/2012 04:00:36 : INFO  : Running memsat_svm check
18/01/2012 04:02:25 : INFO  : Globular protein
18/01/2012 04:02:26 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f9e8c21fa367e305'
18/01/2012 04:02:27 : INFO  : Initialising fold library search
18/01/2012 04:02:31 : INFO  : Initialised search input
18/01/2012 04:02:33 : INFO  : Building Ensemble models
18/01/2012 04:02:37 : INFO  : Building hh.d2f5ga1.model.1.pdb
18/01/2012 04:02:52 : INFO  : Building hh.d2fyxa1.model.2.pdb
18/01/2012 04:03:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f9e8c21fa367e305/hh.d2fyxa1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f9e8c21fa367e305/d2fyxa1.2.pdb
18/01/2012 04:03:09 : INFO  : Building hh.c2vhgB_.model.3.pdb
18/01/2012 04:03:20 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f9e8c21fa367e305/hh.c2vhgB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f9e8c21fa367e305/c2vhgB_.3.pdb
18/01/2012 04:03:26 : INFO  : Building hh.d2vjva1.model.4.pdb
18/01/2012 04:03:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f9e8c21fa367e305/hh.d2vjva1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f9e8c21fa367e305/d2vjva1.4.pdb
18/01/2012 04:03:41 : INFO  : Building d2f5ga1.1.pdb
18/01/2012 04:03:55 : INFO  : Building d2fyxa1.2.pdb
18/01/2012 04:04:09 : INFO  : Building c2vhgB_.3.pdb
18/01/2012 04:04:24 : INFO  : Building d2vjva1.4.pdb
18/01/2012 04:04:38 : INFO  : Building d1nzya_.5.pdb
18/01/2012 04:04:52 : INFO  : Building c2ej5B_.6.pdb
18/01/2012 04:05:08 : INFO  : Building d1qgva_.7.pdb
18/01/2012 04:05:21 : INFO  : Building c2hldH_.8.pdb
18/01/2012 04:05:36 : INFO  : Building c2vx2D_.9.pdb
18/01/2012 04:05:51 : INFO  : Building d2al3a1.10.pdb
18/01/2012 04:06:05 : INFO  : Building c2rq7A_.11.pdb
18/01/2012 04:06:19 : INFO  : Building c1fs0E_.12.pdb
18/01/2012 04:06:34 : INFO  : Building d1y0ua_.13.pdb
18/01/2012 04:06:48 : INFO  : Building d3euga_.14.pdb
18/01/2012 04:07:02 : INFO  : Building c3i0uA_.15.pdb
18/01/2012 04:07:17 : INFO  : Building c2x3gA_.16.pdb
18/01/2012 04:07:29 : INFO  : Building d1nvma1.17.pdb
18/01/2012 04:07:44 : INFO  : Building c3tr7A_.18.pdb
18/01/2012 04:07:58 : INFO  : Building c3trrA_.19.pdb
18/01/2012 04:08:12 : INFO  : Building d1aqta2.20.pdb
18/01/2012 04:09:27 : INFO  : Finished HH model building
18/01/2012 04:09:28 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 04:10:26 : INFO  : html domain output complete ID 'f9e8c21fa367e305'
18/01/2012 04:25:58 : INFO  : Run end  : Wed Jan 18 04:25:57 GMT 2012
