Phyre 2 alignment of Q47152 with d1m0da_

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Job Description | Q47152
Confidence | 3.35% | Date | Thu Jan 5 12:36:27 GMT 2012
Rank | 55 | Aligned Residues | 31
% Identity | 13% | Template | d1m0da_
SCOP info | Restriction endonuclease-like | Restriction endonuclease-like | Endonuclease I (Holliday junction resolvase)
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 135 | . | . | . | . | 140 | . | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | T | F | H | R | D | V | A | R | . | . | . | . | . | . | . | G | L | Y | P | I | D | W | A | G | D | V | T | D | F | S | A | G | E | R | I | I | S
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | S | Y | G | E | F | C | E | K | H | G | I | K | F | A | D | K | L | I | P | A | E | W | I | K | E | P | K | K | E | V | P | F | D | R | L | K | R
Template Known Secondary structure |  |  | B |  |  |  |  |  |  |  |  | T |  |  |  |  |  | S | S |  |  |  |  |  |  |  | S |  |  |  |  |  |  | G | G | G | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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