17/01/2012 14:38:07 : INFO  : Run start: Tue Jan 17 14:38:07 GMT 2012
17/01/2012 14:38:07 : INFO  : Initialised job
17/01/2012 14:38:07 : INFO  : Renaming log file 'phyre2_20120117_143807.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/f9c61ee2af6d59b6/phyre_20120117_143807.log'
17/01/2012 14:38:08 : INFO  : Initialised job:
Sequence
>batch____
MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE
CQAYQERQRKHYA

17/01/2012 14:38:08 : INFO  : Checked sequence
17/01/2012 14:38:08 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 14:38:08 : INFO  : PSI-BLAST 3 iterations
17/01/2012 14:38:51 : INFO  : PSI-BLAST 5 iterations
17/01/2012 14:39:46 : INFO  : Finished PSI-BLAST
17/01/2012 14:39:46 : INFO  : Running Buildali to generate a3m file
17/01/2012 14:42:20 : INFO  : Converting to HMM
17/01/2012 14:42:20 : INFO  : Calibrating HMM
17/01/2012 14:42:22 : INFO  : Searching HMM database
17/01/2012 14:44:16 : INFO  : Finished buildali
17/01/2012 14:44:16 : INFO  : Predicting secondary structure
17/01/2012 14:44:17 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 14:44:17 : INFO  : Predicting Disordered regions
17/01/2012 14:44:17 : INFO  : Predicted Disorder (Disopred)
17/01/2012 14:44:17 : INFO  : Running memsat_svm check
17/01/2012 14:46:16 : INFO  : Globular protein
17/01/2012 14:46:16 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f9c61ee2af6d59b6'
17/01/2012 14:46:16 : INFO  : Initialising fold library search
17/01/2012 14:46:17 : INFO  : Initialised search input
17/01/2012 14:46:17 : INFO  : Building Ensemble models
17/01/2012 14:46:17 : INFO  : Building hh.c2kgoA_.model.1.pdb
17/01/2012 14:46:18 : INFO  : Building hh.c1tjlD_.model.2.pdb
17/01/2012 14:46:18 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f9c61ee2af6d59b6/hh.c1tjlD_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f9c61ee2af6d59b6/c1tjlD_.1.pdb
17/01/2012 14:46:18 : INFO  : Building c1tjlD_.1.pdb
17/01/2012 14:46:19 : INFO  : Building c2kgoA_.2.pdb
17/01/2012 14:46:19 : INFO  : Building c2kq9A_.3.pdb
17/01/2012 14:46:19 : INFO  : Building d1tjla2.4.pdb
17/01/2012 14:46:20 : INFO  : Building c2gviA_.5.pdb
17/01/2012 14:46:21 : INFO  : Building d1tjla1.6.pdb
17/01/2012 14:46:22 : INFO  : Building c3mhsE_.7.pdb
17/01/2012 14:46:23 : INFO  : Building c2b0oF_.8.pdb
17/01/2012 14:46:24 : INFO  : Building c2owaB_.9.pdb
17/01/2012 14:46:24 : INFO  : Building c2p57A_.10.pdb
17/01/2012 14:46:25 : INFO  : Building c3jueA_.11.pdb
17/01/2012 14:46:25 : INFO  : Building c3d00A_.12.pdb
17/01/2012 14:46:25 : INFO  : Building c3lvrE_.13.pdb
17/01/2012 14:46:26 : INFO  : Building d1dcqa2.14.pdb
17/01/2012 14:46:27 : INFO  : Building c1dcqA_.15.pdb
17/01/2012 14:46:28 : INFO  : Building c2iqjB_.16.pdb
17/01/2012 14:46:29 : INFO  : Building c3fehA_.17.pdb
17/01/2012 14:46:30 : INFO  : Building d1rutx1.18.pdb
17/01/2012 14:46:31 : INFO  : Building c2d9lA_.19.pdb
17/01/2012 14:46:32 : INFO  : Building c3dwdB_.20.pdb
17/01/2012 14:46:36 : INFO  : Finished HH model building
17/01/2012 14:46:36 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 14:46:41 : INFO  : html domain output complete ID 'f9c61ee2af6d59b6'
17/01/2012 14:51:42 : INFO  : Run end  : Tue Jan 17 14:51:42 GMT 2012
