Phyre 2 alignment of P41065 with c3na7A_

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Job Description | P41065
Confidence | 16.25% | Date | Thu Jan 5 12:01:22 GMT 2012
Rank | 33 | Aligned Residues | 27
% Identity | 15% | Template | c3na7A_
PDB info | PDB header:gene regulation, chaperone | Chain: A: PDB Molecule:hp0958; | PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
Resolution | 2.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . |  |  |  | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | Y | L | C | E | A | C | G | N | P | I | P | E | A | R | . | . | . | R | K | I | F | P | G | V | T | L | C | V | E | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | Q | A | C | G | G | C | F | I | R | L | N | D | K | I | Y | T | E | V | L | T | S | G | D | M | I | T | C | P | Y | C
Template Known Secondary structure |  | T | B |  | T | T | T |  |  | B |  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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