BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (73 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41065 Protein traR n=37 Tax=root RepID=TRAR_ECOLI            88   1e-16
UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacter...    78   8e-14
UniRef50_Q3ZL39 Putative uncharacterized protein n=1 Tax=Escheri...    77   1e-13
UniRef50_A1JNK3 Hypothetical 8.2 kDa protein in gpa 5'region (Co...    77   2e-13
UniRef50_P41059 Uncharacterized 8.5 kDa protein in gpA 5'region ...    76   2e-13
UniRef50_C6MQY5 Transcriptional regulator, TraR/DksA family n=1 ...    76   3e-13
UniRef50_C9XYU8 Uncharacterized 8.5 kDa protein in gpA 5'region ...    76   3e-13
UniRef50_A2I309 Conjugative transfer protein n=1 Tax=Vibrio phag...    76   4e-13
UniRef50_UPI0001827371 putative prophage protein n=1 Tax=Enterob...    75   5e-13
UniRef50_B8F4E6 DnaK suppressor protein/ C4-type zinc finger pro...    75   7e-13
UniRef50_D2BWU8 Transcriptional regulator, TraR/DksA family n=4 ...    75   9e-13
UniRef50_B5XPP1 Phage/conjugal plasmid C-4 type zinc finger prot...    74   1e-12
UniRef50_B4F0L8 Phage protein n=4 Tax=Enterobacteriaceae RepID=B...    74   1e-12
UniRef50_A4SL94 Phage protein n=2 Tax=root RepID=A4SL94_AERS4          74   2e-12
UniRef50_Q7N7S5 Similar to unknown protein n=1 Tax=Photorhabdus ...    73   2e-12
UniRef50_Q65AH5 TraR protein n=4 Tax=Enterobacteriaceae RepID=Q6...    73   2e-12
UniRef50_Q4QK09 DnaK suppressor protein, bacteriophage PSP3 gp34...    73   3e-12
UniRef50_Q125W5 Transcriptional regulators, TraR/DksA family n=1...    72   5e-12
UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyce...    72   5e-12
UniRef50_B3QCL2 Transcriptional regulator, TraR/DksA family n=14...    71   1e-11
UniRef50_A9QS46 Putative conjugal transfer protein TraR n=1 Tax=...    71   1e-11
UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=5...    71   1e-11
UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammapro...    71   2e-11
UniRef50_A8GA41 Transcriptional regulator, TraR/DksA family n=1 ...    70   2e-11
UniRef50_B8FC44 Transcriptional regulator, TraR/DksA family n=2 ...    70   2e-11
UniRef50_Q4FUG7 Possible phage TraR/DksA family protein n=1 Tax=...    70   2e-11
UniRef50_Q88IG2 C4-type zinc finger protein, DksA/TraR family n=...    70   3e-11
UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 ...    70   3e-11
UniRef50_A7N392 Putative uncharacterized protein n=1 Tax=Vibrio ...    70   3e-11
UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB...    70   3e-11
UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 ...    70   3e-11
UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiob...    69   4e-11
UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 ...    69   5e-11
UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 ...    68   8e-11
UniRef50_A3YA40 C4-type zinc finger protein, DksA/TraR family pr...    68   8e-11
UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibr...    68   8e-11
UniRef50_B6ICF8 TraR protein n=1 Tax=Escherichia coli SE11 RepID...    68   9e-11
UniRef50_A6UZ55 Conserved domain protein n=2 Tax=Pseudomonas Rep...    68   9e-11
UniRef50_B9Z318 Transcriptional regulator, TraR/DksA family n=2 ...    68   9e-11
UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria R...    68   1e-10
UniRef50_A1VE28 Transcriptional regulator, TraR/DksA family n=12...    67   2e-10
UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=6...    67   2e-10
UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7...    67   2e-10
UniRef50_C5B4E4 Putative uncharacterized protein n=1 Tax=Methylo...    67   2e-10
UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1...    66   2e-10
UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilu...    66   2e-10
UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotom...    66   2e-10
UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 ...    66   3e-10
UniRef50_C4GGH6 Putative uncharacterized protein n=1 Tax=Kingell...    66   3e-10
UniRef50_P41039 Uncharacterized protein ybiI n=135 Tax=Proteobac...    66   3e-10
UniRef50_A4XQ42 Transcriptional regulator, TraR/DksA family n=11...    66   3e-10
UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomyc...    66   3e-10
UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 ...    66   4e-10
UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Helioba...    66   4e-10
UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 ...    66   4e-10
UniRef50_UPI0001826470 hypothetical protein EcanA3_08019 n=1 Tax...    66   5e-10
UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacte...    66   5e-10
UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1...    65   5e-10
UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteo...    65   5e-10
UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 ...    65   6e-10
UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solana...    65   6e-10
UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=...    65   7e-10
UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 ...    65   7e-10
UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 ...    65   7e-10
UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 ...    65   9e-10
UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 ...    65   1e-09
UniRef50_A9N2T0 Putative uncharacterized protein n=1 Tax=Salmone...    65   1e-09
UniRef50_B5EUP2 Zinc finger protein n=32 Tax=Proteobacteria RepI...    64   1e-09
UniRef50_Q9MC51 Orf77 n=1 Tax=Pseudomonas phage D3 RepID=Q9MC51_...    64   1e-09
UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5...    64   1e-09
UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 ...    64   1e-09
UniRef50_Q8H9Q7 ORF8 n=1 Tax=Vibrio phage VHML RepID=Q8H9Q7_9CAUD      64   2e-09
UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campy...    64   2e-09
UniRef50_A4JDG9 Transcriptional regulator, TraR/DksA family n=4 ...    64   2e-09
UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carbo...    64   2e-09
UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomyc...    64   2e-09
UniRef50_D0KGB6 Transcriptional regulator, TraR/DksA family n=1 ...    64   2e-09
UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria...    64   2e-09
UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 ...    63   2e-09
UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID...    63   2e-09
UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacte...    63   2e-09
UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 ...    63   2e-09
UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 ...    63   2e-09
UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemm...    63   3e-09
UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 ...    63   3e-09
UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10...    63   4e-09
UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 ...    63   4e-09
UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 ...    63   4e-09
UniRef50_A1B365 Transcriptional regulator, TraR/DksA family n=35...    62   4e-09
UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobact...    62   4e-09
UniRef50_B0TKU6 Transcriptional regulator, TraR/DksA family n=1 ...    62   5e-09
UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 ...    62   5e-09
UniRef50_D1U4E4 Transcriptional regulator, TraR/DksA family n=1 ...    62   5e-09
UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastop...    62   6e-09
UniRef50_B7V4J8 Repressor, PtrB n=8 Tax=Pseudomonas RepID=B7V4J8...    62   6e-09
UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253...    62   7e-09
UniRef50_A7ZJE9 Phage/conjugal plasmid C-4 type zinc finger prot...    62   7e-09
UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovib...    62   7e-09
UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1 ...    62   7e-09
UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YT...    61   7e-09
UniRef50_Q48285 Haemophilus somnus cryptic prophage genes, capsi...    61   8e-09
UniRef50_Q2LQQ9 Hypothetical cytosolic protein n=1 Tax=Syntrophu...    61   9e-09
UniRef50_C4LBC7 Transcriptional regulator, TraR/DksA family n=1 ...    61   1e-08
UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobact...    61   1e-08
UniRef50_Q9ZXI6 Orf39 n=3 Tax=root RepID=Q9ZXI6_9CAUD                  61   1e-08
UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gamm...    61   1e-08
UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 ...    61   1e-08
UniRef50_B0V602 Putative uncharacterized protein n=1 Tax=Acineto...    61   1e-08
UniRef50_B5TA71 Gp07 n=2 Tax=root RepID=B5TA71_9CAUD                   61   2e-08
UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera a...    61   2e-08
UniRef50_Q52PP5 Putative uncharacterized protein n=1 Tax=Xanthom...    61   2e-08
UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 ...    61   2e-08
UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68...    60   2e-08
UniRef50_P44221 Uncharacterized protein HI1497 n=3 Tax=Haemophil...    60   2e-08
UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 ...    60   2e-08
UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopi...    60   2e-08
UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=...    60   2e-08
UniRef50_B3B1J8 Conserved domain protein n=5 Tax=Gammaproteobact...    60   3e-08
UniRef50_Q8EDR9 C4-type zinc finger protein, DksA/TraR family n=...    60   4e-08
UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n...    59   4e-08
UniRef50_A1F607 Conserved domain protein n=3 Tax=Vibrio cholerae...    59   4e-08
UniRef50_A4XZG1 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35...    59   4e-08
UniRef50_B7WXU2 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_B2I3M6 Putative uncharacterized protein n=3 Tax=Acineto...    59   4e-08
UniRef50_A8R990 Putative uncharacterized protein n=2 Tax=unclass...    59   5e-08
UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 ...    59   5e-08
UniRef50_Q06424 Uncharacterized 8.2 kDa protein in gpA 5'region ...    59   5e-08
UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 ...    59   5e-08
UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 ...    59   6e-08
UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria R...    58   6e-08
UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 ...    58   6e-08
UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gr...    58   7e-08
UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium...    58   7e-08
UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 ...    58   8e-08
UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 ...    58   8e-08
UniRef50_C5S4P2 Putative uncharacterized protein n=2 Tax=Pasteur...    58   9e-08
UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marin...    58   9e-08
UniRef50_UPI000190AE5D hypothetical protein Salmoneentericaenter...    58   9e-08
UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 ...    58   9e-08
UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 ...    58   1e-07
UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostri...    58   1e-07
UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1...    58   1e-07
UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 ...    57   1e-07
UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces lim...    57   1e-07
UniRef50_A5EYQ4 DksA-like zinc finger domain containing protein ...    57   1e-07
UniRef50_C8N773 TraR/DksA family transcriptional regulator n=1 T...    57   1e-07
UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1...    57   2e-07
UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10...    57   2e-07
UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromono...    57   2e-07
UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B...    57   2e-07
UniRef50_A3EVE8 Putative uncharacterized protein n=1 Tax=Leptosp...    57   2e-07
UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Ther...    57   2e-07
UniRef50_Q2WA51 DnaK suppressor protein n=1 Tax=Magnetospirillum...    57   2e-07
UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA fami...    57   2e-07
UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3...    57   2e-07
UniRef50_A9ID32 Putative uncharacterized protein n=1 Tax=Bordete...    57   2e-07
UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family pro...    57   2e-07
UniRef50_B6EIS7 Probable rRNA transcription initiatior protein,p...    57   2e-07
UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 ...    56   3e-07
UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1...    56   3e-07
UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 ...    56   3e-07
UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Term...    56   3e-07
UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 ...    56   3e-07
UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11...    56   4e-07
UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter ...    56   4e-07
UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia Re...    56   4e-07
UniRef50_C0QW50 DNA-binding transcriptional regulator of transcr...    56   4e-07
UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR fa...    56   5e-07
UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3...    56   5e-07
UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 ...    56   5e-07
UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillu...    55   5e-07
UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppress...    55   6e-07
UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 ...    55   6e-07
UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 ...    55   6e-07
UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14...    55   6e-07
UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candida...    55   6e-07
UniRef50_B0ZSI9 Putative uncharacterized protein n=1 Tax=Halomon...    55   7e-07
UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Br...    55   7e-07
UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=1...    55   8e-07
UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=...    55   8e-07
UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificac...    55   9e-07
UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR famil...    55   9e-07
UniRef50_Q1GXR9 Transcriptional regulators, TraR/DksA family n=1...    55   9e-07
UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 ...    55   9e-07
UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 ...    55   9e-07
UniRef50_A4NCL4 Putative uncharacterized protein n=1 Tax=Haemoph...    55   9e-07
UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 ...    55   9e-07
UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 ...    55   1e-06
UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=...    55   1e-06
UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26...    55   1e-06
UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae ...    55   1e-06
UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1...    55   1e-06
UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 ...    54   1e-06
UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacte...    54   1e-06
UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 ...    54   1e-06
UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bil...    54   1e-06
UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 ...    54   1e-06
UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuens...    54   1e-06
UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 ...    54   1e-06
UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family ...    54   1e-06
UniRef50_C4WG44 Transcriptional regulator, TraR/DksA family n=1 ...    54   1e-06
UniRef50_Q0HYS5 Transcriptional regulators, TraR/DksA family n=3...    54   1e-06
UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmati...    54   2e-06
UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 ...    54   2e-06
UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 ...    54   2e-06
UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candi...    54   2e-06
UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 ...    54   2e-06
UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4...    54   2e-06
UniRef50_B9JYG7 DnaK suppressor protein n=2 Tax=Agrobacterium vi...    54   2e-06
UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 ...    53   2e-06
UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subt...    53   2e-06
UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 ...    53   2e-06
UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ...    53   2e-06
UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 ...    53   2e-06
UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 ...    53   2e-06
UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=3...    53   2e-06
UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID...    53   2e-06
UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Plancto...    53   3e-06
UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1...    53   3e-06
UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family prot...    53   3e-06
UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 ...    53   3e-06
UniRef50_Q1AWF1 Transcriptional regulators, TraR/DksA family n=1...    53   3e-06
UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacter...    53   3e-06
UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1...    53   3e-06
UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacte...    53   3e-06
UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID...    53   3e-06
UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 ...    53   3e-06
UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9...    53   3e-06
UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromon...    53   4e-06
UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 ...    53   4e-06
UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 ...    53   4e-06
UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 ...    53   4e-06
UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Hermini...    53   4e-06
UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2...    52   5e-06
UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 ...    52   5e-06
UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 ...    52   5e-06
UniRef50_Q2W8C2 Putative uncharacterized protein n=1 Tax=Magneto...    52   5e-06
UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 ...    52   6e-06
UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter Rep...    52   6e-06
UniRef50_UPI0001AEFD73 hypothetical protein SghaA1_01734 n=1 Tax...    52   6e-06
UniRef50_Q2SPX6 DnaK suppressor protein n=1 Tax=Hahella chejuens...    52   7e-06
UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 ...    52   7e-06
UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1...    52   7e-06
UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus su...    52   7e-06
UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 ...    52   7e-06
UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobac...    52   7e-06
UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydroge...    52   7e-06
UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 ...    52   7e-06
UniRef50_C9R760 Putative uncharacterized protein n=1 Tax=Aggrega...    51   8e-06
UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitroco...    51   8e-06
UniRef50_Q0EWC9 Putative uncharacterized protein n=1 Tax=Maripro...    51   8e-06
UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus ...    51   8e-06
UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verruco...    51   9e-06
UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbac...    51   9e-06
UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax...    51   1e-05
UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 ...    51   1e-05
UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13...    51   1e-05
UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 ...    51   1e-05
UniRef50_Q6U9H2 Putative uncharacterized protein n=2 Tax=unclass...    51   1e-05
UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 ...    51   1e-05
UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 ...    51   1e-05
UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family pro...    51   1e-05
UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family prot...    51   1e-05
UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 ...    51   2e-05
UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4 ...    51   2e-05
UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3...    51   2e-05
UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 ...    50   2e-05
UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1...    50   2e-05
UniRef50_C6BZJ9 Transcriptional regulator, TraR/DksA family n=1 ...    50   2e-05
UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 ...    50   2e-05
UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1 ...    50   2e-05
UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 ...    50   2e-05
UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 ...    50   3e-05
UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus ...    50   3e-05
UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 ...    50   3e-05
UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID...    50   3e-05
UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwell...    50   3e-05
UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 ...    50   3e-05
UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 ...    49   4e-05
UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA fam...    49   4e-05
UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 ...    49   4e-05
UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 ...    49   4e-05
UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythro...    49   4e-05
UniRef50_Q602X1 Putative uncharacterized protein n=1 Tax=Methylo...    49   4e-05
UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candida...    49   4e-05
UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 ...    49   5e-05
UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 ...    49   5e-05
UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 ...    49   5e-05
UniRef50_B8J2D3 Transcriptional regulator, TraR/DksA family n=1 ...    49   5e-05
UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 ...    49   5e-05
UniRef50_B7J8S5 Putative uncharacterized protein n=1 Tax=Acidith...    49   5e-05
UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitroso...    49   5e-05
UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=...    49   5e-05
UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    49   5e-05
UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbi...    49   6e-05
UniRef50_A4TVR6 DnaK suppressor protein n=3 Tax=Magnetospirillum...    49   6e-05
UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 ...    48   7e-05
UniRef50_Q1VTU7 General stress protein, DnaK suppressor DskA n=1...    48   8e-05
UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium teta...    48   8e-05
UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinel...    48   8e-05
UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 ...    48   8e-05
UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptun...    48   1e-04
UniRef50_B6YQN7 DnaK suppressor protein n=1 Tax=Candidatus Azoba...    48   1e-04
UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermom...    48   1e-04
UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus c...    48   1e-04
UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinom...    48   1e-04
UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 ...    47   2e-04
UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2 ...    47   2e-04
UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 ...    47   2e-04
UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 ...    47   2e-04
UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax...    47   2e-04
UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepI...    47   2e-04
UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 ...    47   2e-04
UniRef50_Q3Z6R5 DnaK suppressor protein, putative n=5 Tax=Dehalo...    47   2e-04
UniRef50_Q9ZBS4 Putative uncharacterized protein SCO6164 n=4 Tax...    47   2e-04
UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 ...    47   2e-04
UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 ...    47   2e-04
UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 ...    47   2e-04
UniRef50_C6NRK8 Putative uncharacterized protein n=1 Tax=Acidith...    47   2e-04
UniRef50_A1SCC2 Putative uncharacterized protein n=1 Tax=Nocardi...    46   4e-04
UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangi...    46   4e-04
UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobi...    46   5e-04
UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 ...    46   5e-04
UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostrid...    46   5e-04
UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 ...    45   6e-04
UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 ...    45   6e-04
UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter ked...    45   7e-04
UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 ...    45   7e-04
UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinob...    45   7e-04
UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus hal...    45   7e-04
UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3 ...    45   8e-04
UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 ...    45   8e-04
UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 ...    45   9e-04
UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio ac...    45   9e-04
UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 ...    45   0.001
UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 ...    45   0.001
UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD     44   0.001
UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1...    44   0.001
UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillu...    44   0.001
UniRef50_Q1QXM4 Transcriptional regulators, TraR/DksA family n=3...    44   0.002
UniRef50_UPI00016C3E17 hypothetical protein GobsU_32959 n=1 Tax=...    44   0.002
UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 ...    44   0.002
UniRef50_UPI0001C31ADF transcriptional regulator, TraR/DksA fami...    44   0.002
UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1 ...    43   0.002
UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax...    43   0.002
UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobi...    43   0.002
UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 ...    43   0.002
UniRef50_A3HVW0 DnaK suppressor protein, putative n=2 Tax=Bacter...    43   0.003
UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 ...    43   0.003
UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Sacchar...    43   0.003
UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Strepto...    43   0.003
UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax...    43   0.003
UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes R...    43   0.003
UniRef50_A4XRJ7 Transcriptional regulator, TraR/DksA family n=8 ...    43   0.003
UniRef50_A1SED9 Putative DnaK suppressor protein n=1 Tax=Nocardi...    43   0.003
UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=...    43   0.004
UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. ...    43   0.004
UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family prot...    43   0.004
UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales ...    43   0.004
UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesio...    43   0.004
UniRef50_A7HD49 Transcriptional regulator, TraR/DksA family n=1 ...    42   0.005
UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 ...    42   0.005
UniRef50_D1VL44 Transcriptional regulator, TraR/DksA family n=3 ...    42   0.005
UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepI...    42   0.005
UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ...    42   0.006
UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gam...    42   0.006
UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 ...    42   0.006
UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 ...    42   0.007
UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 ...    42   0.007
UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoa...    42   0.007
UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bactero...    42   0.007
UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 ...    41   0.008
UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=...    41   0.008
UniRef50_B7QWI5 Putative uncharacterized protein n=1 Tax=Ruegeri...    41   0.009
UniRef50_Q144T3 Transcriptional regulators, TraR/DksA family n=2...    41   0.009
UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11...    41   0.010
UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 ...    41   0.011
UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3 ...    41   0.015
UniRef50_C6XZU8 DnaK suppressor protein n=4 Tax=Bacteroidetes Re...    41   0.015
UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM...    41   0.015
UniRef50_C1RJC9 DnaK suppressor protein n=4 Tax=Micrococcineae R...    41   0.016
UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xant...    41   0.017
UniRef50_B4D7F0 Transcriptional regulator, TraR/DksA family n=1 ...    41   0.017
UniRef50_Q080Q5 Transcriptional regulators, TraR/DksA family pro...    40   0.018
UniRef50_A6Q6G5 Putative uncharacterized protein n=1 Tax=Sulfuro...    40   0.018
UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50...    40   0.018
UniRef50_A0YAF5 DnaK suppressor protein n=1 Tax=marine gamma pro...    40   0.019
UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine ...    40   0.023
UniRef50_A2SLK3 Putative uncharacterized protein n=1 Tax=Methyli...    40   0.032
UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 ...    40   0.034
UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae ...    40   0.038
UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacte...    39   0.049
UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfuro...    39   0.052
UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteri...    39   0.057
UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine ...    39   0.063
UniRef50_UPI00016C3638 transcriptional regulators, TraR/DksA fam...    38   0.069
UniRef50_A3YDJ1 Putative uncharacterized protein n=1 Tax=Marinom...    38   0.072
UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1 ...    38   0.092
UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio ac...    38   0.098
UniRef50_Q1ZD90 Putative uncharacterized protein n=1 Tax=Psychro...    38   0.099

>UniRef50_P41065 Protein traR n=37 Tax=root RepID=TRAR_ECOLI
          Length = 73

 Score = 87.7 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE
Sbjct: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60

Query: 61 CQAYQERQRKHYA 73
          CQAYQERQRKHYA
Sbjct: 61 CQAYQERQRKHYA 73


>UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacteria
           RepID=A6T2Z9_JANMA
          Length = 310

 Score = 78.0 bits (191), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 9/80 (11%)

Query: 2   SDEADEAYSVTEQLTMTGIN----RIRQKINAHGIP-----VYLCEACGNPIPEARRKIF 52
            D AD A    E            ++ +K+    +         CE  G PI   R    
Sbjct: 229 PDPADRATIEEEHALELRTRDRERKLLKKVQQSLLSIDSGEYGWCEETGEPIGVPRLLAR 288

Query: 53  PGVTLCVECQAYQERQRKHY 72
           P  TL +E Q  +E ++K Y
Sbjct: 289 PTATLSLEAQQRRELKQKLY 308


>UniRef50_Q3ZL39 Putative uncharacterized protein n=1 Tax=Escherichia blattae
          RepID=Q3ZL39_ESCBL
          Length = 76

 Score = 77.3 bits (189), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+   D A  +  +     +N+  +++         C  C  PIP AR +  P    CV 
Sbjct: 1  MTKAFDRASDLEMEERERLLNKHLRRVKELPESYGFCNDCEQPIPAARLQALPDAVTCVT 60

Query: 61 CQAYQERQRKH 71
          CQA +E +RKH
Sbjct: 61 CQAIREHRRKH 71


>UniRef50_A1JNK3 Hypothetical 8.2 kDa protein in gpa 5'region (Conserved
          hypothetical phage protein) n=1 Tax=Yersinia
          enterocolitica subsp. enterocolitica 8081
          RepID=A1JNK3_YERE8
          Length = 74

 Score = 76.9 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D A    E L    I + R K        ++C +C   IPE RR   PGV  CV 
Sbjct: 1  MPDLMDIAQERQEMLLAMQIAKARSKPITA--SAFICASCEAEIPEQRRITVPGVIFCVA 58

Query: 61 CQAYQERQRKHY 72
          CQ   E ++KHY
Sbjct: 59 CQQLHEEKKKHY 70


>UniRef50_P41059 Uncharacterized 8.5 kDa protein in gpA 5'region n=40 Tax=root
          RepID=CP80_BP186
          Length = 75

 Score = 76.5 bits (187), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A    ++     I+  R + +   +  ++CE C  PIPEARR+  PGV  CV 
Sbjct: 1  MADAMDLAQLREQEDRERHISNARSRRHE--VSAFICEECDAPIPEARRRAIPGVQCCVT 58

Query: 61 CQAYQERQRKHY 72
          CQ   E + KHY
Sbjct: 59 CQEILELKSKHY 70


>UniRef50_C6MQY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Geobacter sp.
          M18 RepID=C6MQY5_9DELT
          Length = 74

 Score = 76.5 bits (187), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE D A  ++E+     +             +  CE CG PIPE RR+  PG T CV 
Sbjct: 1  MADEIDLAQEISERHLEAALAGHLDH-KPAAESLTHCEECGRPIPEGRRQAQPGCTRCVR 59

Query: 61 CQAYQE 66
          CQ+  E
Sbjct: 60 CQSGIE 65


>UniRef50_C9XYU8 Uncharacterized 8.5 kDa protein in gpA 5'region n=4
          Tax=Enterobacteriaceae RepID=C9XYU8_CROTZ
          Length = 74

 Score = 76.1 bits (186), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D      E+     I++ R +        +LCE+C  PIPEARR   PGV LCV 
Sbjct: 1  MADVMDLVQQRVEEERERHIHKARSR--QAAPSRFLCESCNGPIPEARRAALPGVELCVT 58

Query: 61 CQAYQERQRKHY 72
          CQ  +E +  HY
Sbjct: 59 CQEIKELKSLHY 70


>UniRef50_A2I309 Conjugative transfer protein n=1 Tax=Vibrio phage VP882
          RepID=A2I309_9CAUD
          Length = 73

 Score = 76.1 bits (186), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSD AD+A  V EQ     +   +  IN        C+ C + IPEARR+  PGV LCV+
Sbjct: 1  MSDIADQAQDVIEQHLTASLANRKHNINPAIPSAKHCDDCESEIPEARRRSLPGVRLCVD 60

Query: 61 CQAYQERQRKH 71
          C + QE + +H
Sbjct: 61 CASLQEIKGRH 71


>UniRef50_UPI0001827371 putative prophage protein n=1 Tax=Enterobacter cancerogenus ATCC
          35316 RepID=UPI0001827371
          Length = 73

 Score = 75.3 bits (184), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A +  ++     I+  R++  +     +LCE C  PIPEARR   PGV LC+ 
Sbjct: 1  MADFIDLAQAREQEDRERHIHHARRRPAS--PSRFLCEECDAPIPEARRMAVPGVALCIT 58

Query: 61 CQAYQERQRKH 71
          CQ   E + KH
Sbjct: 59 CQEIAEMKNKH 69


>UniRef50_B8F4E6 DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR
          family n=8 Tax=root RepID=B8F4E6_HAEPS
          Length = 72

 Score = 74.9 bits (183), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D+ D A  + E+     + ++R K  A    +  CE C  PIPEARR+   G T C++
Sbjct: 1  MKDQIDRANELAEKEREFALAKLRNKPTA--CSLIHCEDCDEPIPEARRQNVQGCTRCID 58

Query: 61 CQAYQERQRKHY 72
          CQ   E ++K Y
Sbjct: 59 CQQIYEYKQKGY 70


>UniRef50_D2BWU8 Transcriptional regulator, TraR/DksA family n=4
          Tax=Enterobacteriaceae RepID=D2BWU8_DICD5
          Length = 69

 Score = 74.6 bits (182), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M DE D      EQ     I + R K       ++ C  CG PIPE RR+  PGVT C E
Sbjct: 1  MPDEIDRDQEFNEQRLEEMIEQNRFKPAT-TPSLHYCRLCGEPIPEKRRQTLPGVTTCTE 59

Query: 61 CQAYQERQRK 70
          CQA  ER+++
Sbjct: 60 CQAIIERRQR 69


>UniRef50_B5XPP1 Phage/conjugal plasmid C-4 type zinc finger protein, TraR family
          n=14 Tax=Enterobacteriaceae RepID=B5XPP1_KLEP3
          Length = 69

 Score = 74.2 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M DE D      EQ     I + R K       ++ C  CG PIPE RR+  PG+T C E
Sbjct: 1  MPDEIDRDQEFNEQRLEEMIEQSRFKP-GSAPSLFHCRVCGKPIPEKRRQTLPGITTCKE 59

Query: 61 CQAYQERQR 69
          CQ   ER  
Sbjct: 60 CQEKLERHS 68


>UniRef50_B4F0L8 Phage protein n=4 Tax=Enterobacteriaceae RepID=B4F0L8_PROMH
          Length = 73

 Score = 74.2 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MS E D A   ++ L    I  +  +    G+  + CE CG  IPE RR    G T C +
Sbjct: 1  MSKEMDLACEQSQLLLDKQIKAVTGR--YIGVSAFECEDCGREIPEKRRIAVMGCTRCAD 58

Query: 61 CQAYQERQRKHY 72
          CQ   E + KHY
Sbjct: 59 CQTVYELKSKHY 70


>UniRef50_A4SL94 Phage protein n=2 Tax=root RepID=A4SL94_AERS4
          Length = 69

 Score = 73.8 bits (180), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 37/68 (54%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D+ D A     ++  T + R   K +  G+ ++ CE C +PIPEARR   PGV LCV CQ
Sbjct: 2  DDIDRANQHAARMLTTNLARQVGKGHYQGMSLHHCEECDDPIPEARRHHVPGVRLCVPCQ 61

Query: 63 AYQERQRK 70
             E+  +
Sbjct: 62 TRIEQLAR 69


>UniRef50_Q7N7S5 Similar to unknown protein n=1 Tax=Photorhabdus luminescens
          subsp. laumondii RepID=Q7N7S5_PHOLL
          Length = 83

 Score = 73.4 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 1  MSDEAD--EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MSD+ D   A +VT       I  +R++++   + +  CE CG+ I E RR+I PGV LC
Sbjct: 1  MSDDIDDTRAQAVTAMWLEEQIAVVRREMHTGRVSLKYCEGCGDRIDEQRRQILPGVQLC 60

Query: 59 VECQAYQERQRK 70
          V CQ   E   +
Sbjct: 61 VGCQEVAEHWEQ 72


>UniRef50_Q65AH5 TraR protein n=4 Tax=Enterobacteriaceae RepID=Q65AH5_YERPE
          Length = 88

 Score = 73.4 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 34/72 (47%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE D      E L    I   RQ+    G     CE CGN IP  R++  PGV  C E
Sbjct: 15 MADELDLLQEQDELLNQLHIQAARQRSCLEGKSRKRCECCGNRIPLRRQQAIPGVRTCTE 74

Query: 61 CQAYQERQRKHY 72
          CQ   E ++K Y
Sbjct: 75 CQRVLEIRQKQY 86


>UniRef50_Q4QK09 DnaK suppressor protein, bacteriophage PSP3 gp34 homolog n=7
          Tax=Haemophilus influenzae RepID=Q4QK09_HAEI8
          Length = 71

 Score = 73.0 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A  + E      + + R       +    CE C  PIPE RR++  GVT CV 
Sbjct: 1  MTDQFDRAQQLEEMQREIALKKHR---TFKAVSRLYCEDCDAPIPEKRRQMIQGVTRCVT 57

Query: 61 CQAYQERQRKHY 72
          CQ   E Q++++
Sbjct: 58 CQQRFEIQQRNF 69


>UniRef50_Q125W5 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
          sp. JS666 RepID=Q125W5_POLSJ
          Length = 79

 Score = 72.2 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGI------PVYLC--EACGNPIPEARRKIF 52
          M D+ D A    +      +     +                C  + CG PIPE RRK  
Sbjct: 1  MPDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKAL 60

Query: 53 PGVTLCVECQAYQERQR 69
          PGV  CVECQ   E++ 
Sbjct: 61 PGVKFCVECQQRLEKKG 77


>UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyces
           RepID=Q9S2X6_STRCO
          Length = 239

 Score = 72.2 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A + T +  ++   R   +++A    +  CE CGNPI +AR + FP  TLCVEC+ 
Sbjct: 176 EHELALAATAREVLSQTERALDRLDAGTYGL--CENCGNPIGKARMQAFPRATLCVECKQ 233

Query: 64  YQERQ 68
            QER+
Sbjct: 234 KQERR 238


>UniRef50_B3QCL2 Transcriptional regulator, TraR/DksA family n=14
          Tax=Proteobacteria RepID=B3QCL2_RHOPT
          Length = 73

 Score = 71.1 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ DEA ++ E+     I R   +I   G     C  CG PI EARRK  P  T CV+
Sbjct: 1  MTDQLDEAQALEERERDDCIARAAGQIK--GHGATHCVVCGEPIDEARRKAMPSATRCVD 58

Query: 61 CQAYQERQRKHY 72
          CQ  +ER  + +
Sbjct: 59 CQESRERWSRSH 70


>UniRef50_A9QS46 Putative conjugal transfer protein TraR n=1 Tax=Pseudomonas
          syringae RepID=A9QS46_PSESX
          Length = 68

 Score = 70.7 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A    + L    + + R +I    +    CE C NPIPE RR    G   C+ 
Sbjct: 1  MADDIDRATEQAQYLLDVALFKHR-RIPTSLVSSQFCEDCDNPIPEPRRAAIVGCETCIH 59

Query: 61 CQAYQERQR 69
          CQ+ +E++R
Sbjct: 60 CQSLREQRR 68


>UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=58
           Tax=Betaproteobacteria RepID=Q21SV6_RHOFD
          Length = 429

 Score = 70.7 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E                 I +   +I++       C+  G  I   R  
Sbjct: 348 PDPADRATIEEEHALELRTRDRERKLLKKIEQSLARIDSGDYG--YCDETGEAIGVGRLL 405

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   L +E Q  +E ++K +
Sbjct: 406 ARPTANLSLEAQQRRELKQKMF 427


>UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammaproteobacteria
           RepID=DKSA_BUCBP
          Length = 151

 Score = 70.7 bits (172), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I +  +K+         CE+CG  I   R +
Sbjct: 70  PDPIDRAVQEEEFSFELRHRDRERKLIEKIEKTLKKVENKDFG--YCESCGIEIGIKRLE 127

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+   E + K 
Sbjct: 128 ARPTANLCIDCKTLSEIREKQ 148


>UniRef50_A8GA41 Transcriptional regulator, TraR/DksA family n=1 Tax=Serratia
          proteamaculans 568 RepID=A8GA41_SERP5
          Length = 73

 Score = 70.3 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A      +    I   R  +         C  C   IPE RR+  PGV+ CV 
Sbjct: 1  MADTIDMAQERQALMLEKQIAHARPVVTQA--SAQFCADCDGEIPEVRRRAIPGVSRCVA 58

Query: 61 CQAYQERQRKHY 72
          CQ   E Q++H+
Sbjct: 59 CQEVSEAQQRHF 70


>UniRef50_B8FC44 Transcriptional regulator, TraR/DksA family n=2
          Tax=Proteobacteria RepID=B8FC44_DESAA
          Length = 69

 Score = 70.3 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D A       T   I   R + +     +  C+ CG+PIPEARRK  PG T C++
Sbjct: 1  MPDPTDRAQEAAADYTRFSIEAARSRGSQST--LADCQDCGDPIPEARRKAVPGCTRCLD 58

Query: 61 CQAYQERQR 69
          CQ   E++R
Sbjct: 59 CQETYEQRR 67


>UniRef50_Q4FUG7 Possible phage TraR/DksA family protein n=1 Tax=Psychrobacter
          arcticus 273-4 RepID=Q4FUG7_PSYA2
          Length = 66

 Score = 69.9 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+AD A    +      ++R           +  C  CG  IP  R +   GVTLCV+
Sbjct: 1  MADDADRANDYVDLTMAHCLSRA---PKFDKPSLTECMECGEDIPAKR-QAMGGVTLCVD 56

Query: 61 CQAYQERQRK 70
          CQ+  E++ K
Sbjct: 57 CQSVFEKRGK 66


>UniRef50_Q88IG2 C4-type zinc finger protein, DksA/TraR family n=1 Tax=Pseudomonas
          putida KT2440 RepID=Q88IG2_PSEPK
          Length = 72

 Score = 69.9 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A    +      ++            +  C  CG  IPE RR    G   C+E
Sbjct: 1  MADIADLANDRAQWHLDLVLSARL--PAPECESLEDCVGCGGSIPEPRRLAVQGCQRCIE 58

Query: 61 CQAYQERQRKHYA 73
          CQ + E++   YA
Sbjct: 59 CQGFFEKKGARYA 71


>UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Halothermothrix
           orenii H 168 RepID=B8CWL7_HALOH
          Length = 228

 Score = 69.6 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D       Q+ +  +     ++      +  CE CG  I E R +  P  TLC  CQA
Sbjct: 60  EKDRGLRDNAQVLLNKVENALNRLEEGNYGL--CEKCGQEIREERLETIPYATLCERCQA 117

Query: 64  YQERQRKHY 72
            +E +  + 
Sbjct: 118 KEEGKDYNR 126


>UniRef50_A7N392 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC
          BAA-1116 RepID=A7N392_VIBHB
          Length = 72

 Score = 69.6 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINR--IRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          M D  D A  +  QLT   +     R K  A       C  CG+PIPEARR+   G   C
Sbjct: 1  MPDVIDHACDIEAQLTEVALANQLARAKPKASRESAQECGECGDPIPEARRQHMTGCQYC 60

Query: 59 VECQAYQERQRK 70
            CQ+  E+ ++
Sbjct: 61 THCQSDLEKMKR 72


>UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB74
           RepID=B5GH83_9ACTO
          Length = 232

 Score = 69.6 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A +   +  +    R   +++A    V  CE CG PI +AR + FP   LCV+C+ 
Sbjct: 170 EHELALAAGSRERLEQTERALLRMDAGTYGV--CENCGKPIGKARMQAFPHAILCVDCKQ 227

Query: 64  YQERQ 68
             ER+
Sbjct: 228 KSERR 232


>UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 Tax=Ammonifex
           degensii KC4 RepID=C9R7U4_AMMDK
          Length = 176

 Score = 69.6 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  I    +++         CE+CG PIP  R +  P  TLC  C+  Q
Sbjct: 39  DLALREDALLKLQVIEDALRRLEEGTYG--YCESCGAPIPRERLEAVPYTTLCHACKERQ 96

Query: 66  ERQR 69
           E + 
Sbjct: 97  EAKG 100


>UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67Q17_SYMTH
          Length = 269

 Score = 69.2 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D          +  I    Q+++       +CE CG PI   R K FP  T C+ CQ  +
Sbjct: 60  DLGLRSHMLRRIQEIESALQRMDQGTYG--ICEECGRPIDPERLKAFPSATTCITCQQRR 117

Query: 66  ERQRKHY 72
           E +   +
Sbjct: 118 EARPDRF 124


>UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7QCE7_CATAD
          Length = 275

 Score = 68.8 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A +   +  +    R   ++ A    V  CE+CG P+ + R + FP  TLC+ C+ 
Sbjct: 213 EHEMAIANNAREMLQQTERALARLAADTYGV--CESCGEPVGKYRLQAFPRATLCMSCKQ 270

Query: 64  YQERQ 68
            QER+
Sbjct: 271 KQERR 275


>UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 Tax=Roseiflexus
           RepID=A5UPY9_ROSS1
          Length = 121

 Score = 68.0 bits (165), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A     +  +  +N   ++++       +C  CG PIP  R +  P  TLCV CQ+
Sbjct: 56  ERDLALRSNARELLEQVNAALRRLDEGTYG--ICADCGEPIPIERLEALPYATLCVRCQS 113

Query: 64  YQERQRK 70
            +ER R+
Sbjct: 114 TRERARR 120


>UniRef50_A3YA40 C4-type zinc finger protein, DksA/TraR family protein n=1
          Tax=Marinomonas sp. MED121 RepID=A3YA40_9GAMM
          Length = 73

 Score = 68.0 bits (165), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI----PVYLCEACGNPIPEARRKIFPGVTLC 58
          DE D A    +      I    ++ +            C  CG  IP  R K  P V  C
Sbjct: 2  DEFDHAQQQEQAFRDKAIAHQLKQPSETPYEDEDGYRYCLDCGQDIPLKRIKALPHVVRC 61

Query: 59 VECQAYQER 67
          V CQ  +ER
Sbjct: 62 VSCQDKKER 70


>UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibrionales
           RepID=A7K6F3_VIBSE
          Length = 208

 Score = 68.0 bits (165), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 9/79 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGI---------PVYLCEACGNPIPEARRKIF 52
            D  D A    E           +++                  CE+CG  I   R +  
Sbjct: 67  PDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEDDFGFCESCGVEIGVRRLEAR 126

Query: 53  PGVTLCVECQAYQERQRKH 71
           P   LC++C+   E + K 
Sbjct: 127 PTADLCIDCKTLAEIKEKQ 145


>UniRef50_B6ICF8 TraR protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF8_ECOSE
          Length = 74

 Score = 68.0 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE +   S    L    I RIRQ++   GI    C+ CG P+P  RR++ PGV  CV 
Sbjct: 1  MADEIERFQSHQAMLEADRIQRIRQQLT--GISALFCDDCGAPVPAERRRLIPGVRKCVG 58

Query: 61 CQAYQERQRKHY 72
          CQ  QE Q +HY
Sbjct: 59 CQEVQEIQARHY 70


>UniRef50_A6UZ55 Conserved domain protein n=2 Tax=Pseudomonas RepID=A6UZ55_PSEA7
          Length = 69

 Score = 68.0 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A +   Q     +   + ++   G  +  C+ CG  IPEARR    G+  C  
Sbjct: 1  MADCFDRAQARELQDRELALQAHQVRVRPSGPSLTHCQECGEQIPEARR-ALGGIIRCTP 59

Query: 61 CQAYQERQRK 70
          CQA  E+  +
Sbjct: 60 CQARFEKGGR 69


>UniRef50_B9Z318 Transcriptional regulator, TraR/DksA family n=2
          Tax=Chromobacterium group RepID=B9Z318_9NEIS
          Length = 68

 Score = 68.0 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A  +  +     I   R  +   G+    CE CG PIP AR+   PG T CV+CQ
Sbjct: 2  DPFDRAQELEMEQREAAIAAARD-LVGRGVSATECEDCGTPIPPARQLAAPGCTRCVDCQ 60

Query: 63 AYQERQRK 70
            +ER R+
Sbjct: 61 NRRERPRR 68


>UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria RepID=Q5UF45_9PROT
          Length = 202

 Score = 67.6 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 9/79 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINA---------HGIPVYLCEACGNPIPEARRKIF 52
            D  D A    E +         +K+ A                CE+CG  I   R +  
Sbjct: 121 PDSLDRAAKEEEFMLELRKRERERKLIAKIDLSLKDLEDNLYGYCESCGVEIGIKRLEAR 180

Query: 53  PGVTLCVECQAYQERQRKH 71
           P  T C++C+   E + K 
Sbjct: 181 PTATKCIDCKTVDEIKEKQ 199


>UniRef50_A1VE28 Transcriptional regulator, TraR/DksA family n=12
          Tax=Desulfovibrio RepID=A1VE28_DESVV
          Length = 78

 Score = 67.2 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAH-----GIPVYLCEACGNPIPEARRKIFPGV 55
          M+D  D+A     +     I+  R ++ +            C  CG  IPEAR K  PG 
Sbjct: 6  MADIFDQASDYEARDREAAISAARNRLASGPGPEWIDGKPCCRECGEVIPEARVKALPGC 65

Query: 56 TLCVECQAYQE 66
           LC EC    E
Sbjct: 66 GLCRECAEEME 76


>UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=65
           Tax=Betaproteobacteria RepID=Q12EM6_POLSJ
          Length = 450

 Score = 67.2 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E                 I +   +I++       C+  G PI   R  
Sbjct: 369 PDPADRATIEEEHALELRTRDRERKLLKKIEQSIARIDSGDYG--YCDETGEPIGVGRLI 426

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   L +E Q  +E ++K +
Sbjct: 427 ARPTANLSLEAQQRRELKQKMF 448


>UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7
           Tax=Actinomycetales RepID=A0LTP3_ACIC1
          Length = 527

 Score = 67.2 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            E   A     +  +        +I         CE CGNPI + R +  P  TLCV C+
Sbjct: 466 HEMSLAN--NARDLLVQTEHALARIADGTYGR--CENCGNPINKLRLQANPRATLCVSCK 521

Query: 63  AYQERQ 68
             +ER+
Sbjct: 522 QREERR 527


>UniRef50_C5B4E4 Putative uncharacterized protein n=1 Tax=Methylobacterium
          extorquens AM1 RepID=C5B4E4_METEA
          Length = 73

 Score = 66.9 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 28/67 (41%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D    + E      +  IR +     +    C+ CG  IP  RR+  P    CV 
Sbjct: 1  MADDVDMIQHLDEMAMDGKLAAIRSRTETTDLAPEDCDDCGGDIPMERRRAAPWTRRCVR 60

Query: 61 CQAYQER 67
          CQ   ER
Sbjct: 61 CQTLAER 67


>UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RK56_MOOTA
          Length = 251

 Score = 66.5 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     Q+ +  I    Q I         C  CG  IP  R +  P  TLC+EC+   
Sbjct: 63  DLALRDNVQVQLRKIEDALQSIAEGTYG--YCRRCGREIPRERLEAIPETTLCLECRRKM 120

Query: 66  ERQRKHYA 73
           E +   ++
Sbjct: 121 EGKADKHS 128


>UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilum infernorum V4
           RepID=B3DUR8_METI4
          Length = 249

 Score = 66.5 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A S+  Q   + I               +C+ CG PIP  R +  P     V+CQ 
Sbjct: 147 DRDFALSLLSQENDSLIEIDDSLKRIEDNTYGICQMCGKPIPIIRLQAIPYARFTVDCQR 206

Query: 64  YQERQRKHY 72
             E + K Y
Sbjct: 207 QLE-KEKMY 214


>UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D3H2_PELTS
          Length = 242

 Score = 66.5 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  I+R   KI         C+ CG  IP  R +  P    C +C+  +
Sbjct: 68  DFALRENAMLAVAAIDRALAKIENGTYGK--CDNCGREIPLERLEAVPSTVCCKKCKEAE 125

Query: 66  ERQRK 70
           E+  +
Sbjct: 126 EKNTR 130


>UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermosinus
           carboxydivorans Nor1 RepID=A1HSA8_9FIRM
          Length = 227

 Score = 66.1 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  +    +K+ A      +C+ CG  I   R +  P    C+ C+   
Sbjct: 63  DLALRDNAHLLLEQVEHALEKVAAGNYG--ICDNCGREIGIERLQAIPYAARCIVCEKKY 120


>UniRef50_C4GGH6 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC
          51147 RepID=C4GGH6_9NEIS
          Length = 75

 Score = 66.1 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 35/73 (47%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MS + D+A  + E+     ++   ++          C+ CG+ IPEARR+   G   C+E
Sbjct: 1  MSRQIDQACELEERYRQAALDYQAKQNYPQRPSASHCQDCGDIIPEARRRAALGCQYCIE 60

Query: 61 CQAYQERQRKHYA 73
          CQ   E  +  YA
Sbjct: 61 CQERIEHAKAQYA 73


>UniRef50_P41039 Uncharacterized protein ybiI n=135 Tax=Proteobacteria
          RepID=YBII_ECOLI
          Length = 88

 Score = 66.1 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D             I R R +I   G  +  CE CG PIP+ARR+  PGV LC+ CQ  +
Sbjct: 9  DAVNEQINSTIEDAIARARGEI-PRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEK 67

Query: 66 ERQRKHYA 73
          + Q+  Y 
Sbjct: 68 DLQKPAYT 75


>UniRef50_A4XQ42 Transcriptional regulator, TraR/DksA family n=11
          Tax=Proteobacteria RepID=A4XQ42_PSEMY
          Length = 88

 Score = 66.1 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D      +      I R R ++   G  +  CE C   IPEARR+  PGV LCV+CQA  
Sbjct: 9  DAVQEQIDSSIEDAIARARSQL-PKGESLRHCEECDAVIPEARRQAIPGVRLCVKCQAEH 67

Query: 66 ERQRKHYA 73
          +R+   Y+
Sbjct: 68 DRENAAYS 75


>UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomycetales
           RepID=A1SL71_NOCSJ
          Length = 283

 Score = 66.1 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +E+  +  I R   +I+     V  CE+CGNPI + R   FP  TLC+ C+  +ER+
Sbjct: 229 SERDKLAQIERALARIDDGTYGV--CESCGNPIGKMRLMAFPRATLCMTCKQREERR 283


>UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula
           staleyi DSM 6068 RepID=D2R2J7_9PLAN
          Length = 148

 Score = 66.1 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE +   +  E   +  I+   +++ +       CE C  PIP  R +  P   +C++CQ
Sbjct: 53  DEINSQLAEVESRELAHIDTALERMRSGNYGA--CEGCNEPIPLLRLQALPYAVMCIKCQ 110

Query: 63  AYQER 67
              E+
Sbjct: 111 REAEK 115


>UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Heliobacterium
           modesticaldum Ice1 RepID=B0TGP7_HELMI
          Length = 238

 Score = 65.7 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A        +  I + +++I+       +CE C   IP+AR    P  TLC+ECQ+++
Sbjct: 62  DLATRDRFSRELDEIAKAKRRISEGIYG--ICERCHQKIPDARMAAMPTATLCIECQSHE 119

Query: 66  E 66
           E
Sbjct: 120 E 120


>UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfotomaculum acetoxidans DSM 771
           RepID=C8W4E4_DESAS
          Length = 231

 Score = 65.7 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  +    + I        +C+ CG  I  AR    P  TLC EC+  Q
Sbjct: 63  DFALRDDAMLKIRAVEDALKNIEMGKYG--ICDICGKEIGYARLTALPRTTLCKECKEAQ 120

Query: 66  ER 67
           ER
Sbjct: 121 ER 122


>UniRef50_UPI0001826470 hypothetical protein EcanA3_08019 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001826470
          Length = 71

 Score = 65.7 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A  + E      ++    +IN + +    CE CG  IPE RR   PG   C ECQ
Sbjct: 2  DIIDTAAEIEELQRNAALSAH--RINRNAVSAERCEECGEDIPEPRRAAVPGCQTCSECQ 59

Query: 63 AYQERQRKHY 72
          +  E + K  
Sbjct: 60 SVIELKNKQR 69


>UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacteria
           RepID=A4SHJ5_AERS4
          Length = 128

 Score = 65.7 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 1   MSDEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           M+DE D A     +                +    ++IN        CE+CG+ I   R 
Sbjct: 43  MADEIDRASIEEARRLELNRIEHDKLHLRKLQGALRRINEGDFG--YCESCGDEISLKRL 100

Query: 50  KIFPGVTLCVECQAYQERQRKH 71
           +  P    CVECQ+ +E    H
Sbjct: 101 QARPESRFCVECQSTKEFNDTH 122


>UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20
           RepID=Q30V43_DESDG
          Length = 149

 Score = 65.3 bits (158), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYL---------CEACGNPIPEARRKIF 52
            DE ++A  + E      +     +  A                CE CG+ I EAR K  
Sbjct: 61  PDENEQASRLAELTLDVALRGRLARQLAAVESALHRIATGGFGRCEECGDEIGEARLKAN 120

Query: 53  PGVTLCVECQAYQERQRKHY 72
           P  TLC+ CQ  +E +    
Sbjct: 121 PTTTLCIHCQEDREAEAARR 140


>UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteobacteria
           RepID=DKSA_HAEIN
          Length = 145

 Score = 65.3 bits (158), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 9/81 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKI---------NAHGIPVYLCEACGNPIPEARRKIF 52
            D AD A    E           +K+                  C+ CG  I   R +  
Sbjct: 64  PDPADRATQEEEFSLELRNRDRERKLMKKIEATLKKLDTDDFGYCDCCGEEIGIRRLEAR 123

Query: 53  PGVTLCVECQAYQERQRKHYA 73
           P   LC++C+   E + K  A
Sbjct: 124 PTADLCIDCKTLAEIREKQVA 144


>UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 Tax=Streptomyces
           RepID=D1X2L9_9ACTO
          Length = 248

 Score = 65.3 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +   Q  +    R   ++ A    +  CE CG PI +AR + FP  TLCVE + 
Sbjct: 185 EHELSLAANAQEMLEQTERALARLEAGTYGL--CEICGKPIGKARMQAFPRATLCVEDKQ 242

Query: 64  YQERQR 69
            QER+ 
Sbjct: 243 KQERRG 248


>UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solanacearum UW551
           RepID=A3RXC3_RALSO
          Length = 224

 Score = 65.3 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQ-----------KINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +           +I+        C+  G PI   R  
Sbjct: 143 PDPADRATIEEEHALELRTRDRERKLLKKVEQSIQRIDEGNYG--YCDETGEPIGVPRLL 200

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q  +E+++K +
Sbjct: 201 ARPTATLTLEAQERREKRQKLF 222


>UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=3
           Tax=Propionibacterium acnes RepID=D1YA14_PROAC
          Length = 159

 Score = 64.9 bits (157), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 13/77 (16%)

Query: 3   DEADEAYSVTEQLTMTGINR-----------IRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D   S  E+     + R             Q ++        CE+CG PI +AR + 
Sbjct: 85  DTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDRGTWGT--CESCGEPIGKARLQA 142

Query: 52  FPGVTLCVECQAYQERQ 68
           FP  T+CV+C+  QER+
Sbjct: 143 FPRATMCVKCKQRQERR 159


>UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7
           Tax=Cystobacterineae RepID=A7H9X1_ANADF
          Length = 120

 Score = 64.9 bits (157), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 1   MSDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           + DE D A S             E+  +  I++   +I        +CE C   I   R 
Sbjct: 39  LPDEIDLASSEYTQSMIFRLRDREKFLLAKIDKALARIENGTFG--ICERCEEEISVKRL 96

Query: 50  KIFPGVTLCVECQAYQERQRKHY 72
           +  P  TLC+ C+  QE++ K +
Sbjct: 97  EARPVTTLCIRCKEEQEQKEKSF 119


>UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2
           Tax=Desulfitobacterium hafniense RepID=B8FT18_DESHD
          Length = 222

 Score = 64.9 bits (157), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 9/78 (11%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPV---------YLCEACGNPIPEARRKIFP 53
             AD A  V E+     I+                       LCE C   IP  R +  P
Sbjct: 45  HPADIATEVYERSRDVAIHDRLHHRIQAIDSALQRYEEGKYGLCEHCQKEIPLGRLEALP 104

Query: 54  GVTLCVECQAYQERQRKH 71
             T+C EC   +E + +H
Sbjct: 105 FTTVCTECSRLEEMEEQH 122


>UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum
           RepID=C6I0P9_9BACT
          Length = 136

 Score = 64.5 bits (156), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M +  D A           +++   ++         CE CG  I E R    P   LC++
Sbjct: 56  MGEGVDLALLEMRNRMKRSVDQALLRLEEGSYG--NCEDCGGEIEEKRLMAMPFAQLCIK 113

Query: 61  CQAYQERQRK 70
           CQ  +E   K
Sbjct: 114 CQRKKEELEK 123


>UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8
           Tax=Deltaproteobacteria RepID=A1AL35_PELPD
          Length = 118

 Score = 64.5 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPV---------YLCEACGNPIPEARRKIF 52
            D  D A   +++     I    +K+                 +CE CG+ I EAR K+ 
Sbjct: 39  PDPTDRATQESDRNFELRIRDRERKLINKIKEALSRIDSGEFGICEECGDEIGEARLKVR 98

Query: 53  PGVTLCVECQAYQERQRKH 71
           P  TLC+ C+   E++ K 
Sbjct: 99  PVTTLCINCKLEAEKKEKR 117


>UniRef50_A9N2T0 Putative uncharacterized protein n=1 Tax=Salmonella enterica
          subsp. enterica serovar Paratyphi B str. SPB7
          RepID=A9N2T0_SALPB
          Length = 84

 Score = 64.5 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 1  MSDEA--DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MS++   + A + T   T  GIN IR K+++      +CE CG  IP AR+   PGV LC
Sbjct: 1  MSEDLNDEMAQASTAIFTQRGINAIRAKVHSLRPSKEICECCGADIPAARQLAVPGVELC 60

Query: 59 VECQAYQERQRKHYA 73
            CQ  +E+Q  H A
Sbjct: 61 AACQDVKEKQDVHRA 75


>UniRef50_B5EUP2 Zinc finger protein n=32 Tax=Proteobacteria RepID=B5EUP2_VIBFM
          Length = 89

 Score = 64.2 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              +   +  INR R  ++        C  CG  IPEARR I PGV LCVECQA ++ +
Sbjct: 12 QEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVELCVECQAKEDAR 71

Query: 69 RKHYA 73
           K ++
Sbjct: 72 EKAFS 76


>UniRef50_Q9MC51 Orf77 n=1 Tax=Pseudomonas phage D3 RepID=Q9MC51_BPD3
          Length = 67

 Score = 64.2 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A    E+       R+  ++   G  +Y CE CG  IP ARR++ PGV  C+ CQ
Sbjct: 2  DIVDIANDYAERELA---ERLYSRVKYVGESLYECEDCGEEIPVARRELVPGVRKCLSCQ 58

Query: 63 AYQE 66
           Y E
Sbjct: 59 EYLE 62


>UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5 Tax=Clostridium
           RepID=A3DD29_CLOTH
          Length = 212

 Score = 64.2 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A  V E+  +  IN    K++        CE CG  I E R +  P   LC++C+ 
Sbjct: 61  ELNNALKVHEERLLEDINEALTKMDKGSFGK--CELCGKEIDEERLEALPYTRLCIDCEN 118

Query: 64  YQE 66
            +E
Sbjct: 119 AKE 121


>UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 Tax=Clostridia
           RepID=A4XKS6_CALS8
          Length = 209

 Score = 64.2 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 3   DEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  + E           +  +  I +   KI         C +C   IP  R   
Sbjct: 49  HPADIASDLFEVEKNMGLKADMKRKLELIEKALSKIEKGNFG--YCISCKKEIPFDRLLA 106

Query: 52  FPGVTLCVECQAYQERQR 69
            P    C+ECQ   E++ 
Sbjct: 107 IPYTEFCIECQKDMEKRE 124


>UniRef50_Q8H9Q7 ORF8 n=1 Tax=Vibrio phage VHML RepID=Q8H9Q7_9CAUD
          Length = 75

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          +D  D A ++++      ++RI+      G+  + C  CG+ IP+ RR++  GVT CV+C
Sbjct: 6  ADPLDRAAALSQAHLEVSLSRIK---KFEGVSAHECVECGSEIPKKRRELLQGVTDCVDC 62

Query: 62 QAYQERQRKHY 72
           A +E   K+Y
Sbjct: 63 AAIKETLSKNY 73


>UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campylobacter
           RepID=A1VXK8_CAMJJ
          Length = 120

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A S   +  +  I     KI        +CE+C + I   R K+ P    C+ C+ 
Sbjct: 53  QIDFAISTNLKEELIEIEDSLDKIKNGTYG--ICESCDDEIDSQRLKVKPHARYCITCRQ 110

Query: 64  YQERQRKH 71
             E+ +KH
Sbjct: 111 IAEQGKKH 118


>UniRef50_A4JDG9 Transcriptional regulator, TraR/DksA family n=4
          Tax=Proteobacteria RepID=A4JDG9_BURVG
          Length = 77

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLC--EACGNPIPEARRKIFPGVTLCVE 60
          D+ D A  + EQ     I    + +++       C  EACG PIPE RR+   G   CVE
Sbjct: 2  DDFDHASDIEEQYRALAIAAATRPVHSAAESESFCQNEACGEPIPEERRRAVSGCRFCVE 61

Query: 61 CQAYQER 67
          CQ  +E+
Sbjct: 62 CQERREQ 68


>UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carboxydothermus
           hydrogenoformans Z-2901 RepID=Q3ABZ5_CARHZ
          Length = 213

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     +L +  I+     IN     +  C  CG  IP  R    P    CV CQ   
Sbjct: 59  DFALIDNLKLKLRQIDEAIALINQGKYGL--CIDCGQKIPVDRLFANPVAIRCVACQKRV 116

Query: 66  ERQ 68
           E +
Sbjct: 117 EER 119


>UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomycetales
           RepID=A4XDN2_SALTO
          Length = 139

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   A S+ E++T   + R  ++++  G     CE CGNPIP  R   FP  TLCV C+ 
Sbjct: 79  EISLANSILERITQ--VERALERLDEGGYG--WCERCGNPIPVERLAAFPSATLCVTCKQ 134

Query: 64  YQERQ 68
             ER+
Sbjct: 135 LAERR 139


>UniRef50_D0KGB6 Transcriptional regulator, TraR/DksA family n=1
          Tax=Pectobacterium wasabiae WPP163 RepID=D0KGB6_PECWW
          Length = 79

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 1  MSDEAD--EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MS + D   A + TEQL  + ++ I + ++   I    C+ACGN IPEARR   PGV LC
Sbjct: 1  MSHDLDDEMAMATTEQLLQSSLSLILRNVHNGRISNTCCDACGNEIPEARRLAVPGVELC 60

Query: 59 VECQAYQERQRK 70
          V CQ  +E   K
Sbjct: 61 VGCQEVEEHLTK 72


>UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria RepID=DKSA_ECO57
          Length = 151

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 9/81 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKI---------NAHGIPVYLCEACGNPIPEARRKIF 52
            D  D A    E           +K+                  CE+CG  I   R +  
Sbjct: 70  PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129

Query: 53  PGVTLCVECQAYQERQRKHYA 73
           P   LC++C+   E + K  A
Sbjct: 130 PTADLCIDCKTLAEIREKQMA 150


>UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q021M5_SOLUE
          Length = 143

 Score = 63.4 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D     TE+                +    Q+I      V  C  C N IP  R K
Sbjct: 54  ADSLDRIQHATEREMAIRRIELDFSKVQSVRSALQRIAEGTYGV--CSECDNEIPGKRLK 111

Query: 51  IFPGVTLCVECQAYQERQR 69
             P    C++CQ   +R+R
Sbjct: 112 AVPWTPYCLDCQDSADRRR 130


>UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID=B2S244_TREPS
          Length = 120

 Score = 63.4 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 2   SDEADEAYSVT----EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           SD+ D     +    +   +  I     +I         C  CG  IPE R +  P   +
Sbjct: 48  SDDMDRKMLESLSAKDLRCLQQIESALLRIEQGRYGK--CADCGESIPEDRLRAIPYSLM 105

Query: 58  CVECQAYQERQRKHY 72
           C+ECQ+ +E +R+ +
Sbjct: 106 CIECQSARESKRRAF 120


>UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacteria
           RepID=A8PLZ9_9COXI
          Length = 295

 Score = 63.4 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 13/82 (15%)

Query: 1   MSDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARR 49
           + D +D A    E                 I     +++        C +CG  I   R 
Sbjct: 213 LPDMSDRATQEEEFNLELRARDRERKLIKKIEDALHQLDEGHYG--FCSSCGVEIGIRRL 270

Query: 50  KIFPGVTLCVECQAYQERQRKH 71
           +  P   LC++C+   E + K 
Sbjct: 271 EARPTANLCIDCKTLDEIREKQ 292


>UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfotomaculum reducens MI-1 RepID=A4J571_DESRM
          Length = 234

 Score = 63.4 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A       T+  I+    K+        +CE C   I + R +  P  T C++C++  
Sbjct: 64  DFALREDAITTLGAIDDALDKMEEGMYG--ICEVCHQEISQDRLEAIPYTTQCIDCKSRD 121

Query: 66  ERQRKHY 72
           E   K +
Sbjct: 122 EHLPKSH 128


>UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=D2L3E3_9DELT
          Length = 131

 Score = 63.4 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +++                IN    ++        +C+ CG  I  AR +
Sbjct: 39  ADVADRATAESDRHLTILMRERDRQLIGEINEALARVKDGDYG--ICQECGEEIGLARLR 96

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TLCV C++  E   + Y
Sbjct: 97  AQPTATLCVHCKSMLEEMGRPY 118


>UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemmata obscuriglobus UQM
          2246 RepID=UPI00016C4B65
          Length = 95

 Score = 63.0 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           +  E   +  I R  +++ A       CE C   IP AR    P  T CV+CQ   ER
Sbjct: 1  MAELEAKELAQIERALRRLKAGTYGK--CEVCSIKIPVARLNALPFSTFCVDCQREMER 57


>UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Desulforudis audaxviator MP104C RepID=B1I4J4_DESAP
          Length = 212

 Score = 62.6 bits (151), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     +  +  +     +++        C+ CG  I   R +  P  T C EC+A  
Sbjct: 67  DFALRENARFRLLAVEDALARMDRGTYGR--CDECGVDIDLERLEAVPFTTKCRECKARA 124

Query: 66  ERQR 69
           E + 
Sbjct: 125 EGKD 128


>UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10
           Tax=Actinomycetales RepID=A6WCW5_KINRD
          Length = 159

 Score = 62.6 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
             +  +    R   ++ +    V  CE+C  P+ +AR + FP VTLCV C++  ER+
Sbjct: 105 NARELLEQTQRALVRLGSGVYGV--CESCDGPVGKARLQAFPRVTLCVRCKSRGERR 159


>UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 Tax=Dethiobacter
           alkaliphilus AHT 1 RepID=C0GJQ4_9FIRM
          Length = 203

 Score = 62.6 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D +     Q+ +  +    +K++     +  CE CG PIPE R    P    CV+C+   
Sbjct: 62  DISLHEKNQMVLDKVEEALEKLDNDIYGM--CENCGKPIPEERLDALPYAEFCVQCKKKS 119

Query: 66  E 66
           E
Sbjct: 120 E 120


>UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1AEE3_THECD
          Length = 114

 Score = 62.6 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            D+     +   + T+  I     ++      +  CE CG PIPE R +I P    CV C
Sbjct: 49  PDDTALVQADALRQTLEDIEEALLRLRQGRYGL--CEKCGKPIPEGRLEILPYARCCVSC 106

Query: 62  QAYQERQR 69
           Q  +  + 
Sbjct: 107 QQRRRGRA 114


>UniRef50_A1B365 Transcriptional regulator, TraR/DksA family n=35
          Tax=Proteobacteria RepID=A1B365_PARDP
          Length = 91

 Score = 62.2 bits (150), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHG--IPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
          D      E  T   I R+R +    G       CE C  PIPEARR+  PGV LCV+CQ+
Sbjct: 9  DAVNEQIEVSTQEAIERMRLRNAQRGDRESAAFCEECDEPIPEARRRAIPGVRLCVDCQS 68

Query: 64 YQER 67
           ++R
Sbjct: 69 GRDR 72


>UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobacteria
           RepID=Q2LSS1_SYNAS
          Length = 150

 Score = 62.2 bits (150), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPV---------YLCEACGNPIPEARRKIF 52
            D  D A   +++     +    +K+ A               LCE CG PI E R    
Sbjct: 69  PDPTDRASLESDRNFELRMRDRERKLIAKMQEAIKRIDEGEFGLCEVCGGPISEKRLMAR 128

Query: 53  PGVTLCVECQAYQERQRK 70
           P  TLC++C+  QE+  K
Sbjct: 129 PVTTLCIDCKTKQEKLEK 146


>UniRef50_B0TKU6 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella
          halifaxensis HAW-EB4 RepID=B0TKU6_SHEHH
          Length = 68

 Score = 62.2 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 31/67 (46%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          DE DE+  V  +     +     K+         C  CG  IPE RR+   GV LC++CQ
Sbjct: 2  DEGDESVRVQARALNQYLAGRATKLLVAKASASYCARCGEDIPEPRRQAVKGVQLCIDCQ 61

Query: 63 AYQERQR 69
             ER++
Sbjct: 62 TLSERKQ 68


>UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 Tax=Verrucomicrobia
           RepID=B4D0A5_9BACT
          Length = 233

 Score = 62.2 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 4   EADEAYSVTEQLTMT--GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+  Q       I    ++I      V  CE  G PI   R +  P     VEC
Sbjct: 134 DRDFALSLLSQEQDALYEIEEALKRIELGTYGV--CEMSGKPIAHPRLEALPFARYTVEC 191

Query: 62  QAYQERQRK 70
           Q+  E+Q K
Sbjct: 192 QSQIEKQGK 200


>UniRef50_D1U4E4 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
          aespoeensis Aspo-2 RepID=D1U4E4_9DELT
          Length = 66

 Score = 62.2 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D  +   E      ++    +  A       C  CG PIPE RR   PGVTLCV 
Sbjct: 1  MPDFCDMGHEAEELARKAALSMAGTR-RADAPSRETCAECGAPIPEPRRVAVPGVTLCVA 59

Query: 61 CQAYQE 66
          CQA +E
Sbjct: 60 CQAAKE 65


>UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastopirellula marina DSM
           3645 RepID=A3ZQT2_9PLAN
          Length = 134

 Score = 61.8 bits (149), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE     +  E   +  I++  ++I         CE C   IP AR +  P  TLC++CQ
Sbjct: 54  DELSSQLAEVESRELAQIDKALERIRGG--SFGECEGCTCKIPTARLQALPYATLCIKCQ 111

Query: 63  AYQE 66
              E
Sbjct: 112 RELE 115


>UniRef50_B7V4J8 Repressor, PtrB n=8 Tax=Pseudomonas RepID=B7V4J8_PSEA8
          Length = 66

 Score = 61.8 bits (149), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A  +        +    +   A       CE CG PIP+ARR+  PG + C++
Sbjct: 1  MADLADHANELVLARLDGLLAA--RPALAIRESAEDCEDCGEPIPQARRRAAPGCSRCID 58

Query: 61 CQAYQERQ 68
          CQ   ER+
Sbjct: 59 CQDRHERR 66


>UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253H0_CHLFF
          Length = 124

 Score = 61.8 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 2   SDEADEAYSVT----EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           +D  D   S+     E   +  INR  +KI        +C+  G  IP AR    P  T+
Sbjct: 51  TDTFDRTISLEVTTKEYELLRQINRALEKIEESSYG--ICDVSGEEIPLARLMAIPYATM 108

Query: 58  CVECQAYQER 67
            V+ Q+  E+
Sbjct: 109 TVKAQSQFEK 118


>UniRef50_A7ZJE9 Phage/conjugal plasmid C-4 type zinc finger protein, TraR family
          n=45 Tax=root RepID=A7ZJE9_ECO24
          Length = 73

 Score = 61.8 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A  + E    T I    +++N   I    C  CG+PI E RR +  G   C  
Sbjct: 1  MADIIDSASEIEELQRNTAIK--MRRLNHQAISATHCCECGDPIDERRRLVVQGCRTCAS 58

Query: 61 CQAYQERQRKHY 72
          CQ   E   K  
Sbjct: 59 CQEDLELISKQR 70


>UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovibrio yellowstonii
           DSM 11347 RepID=B5YGE3_THEYD
          Length = 129

 Score = 61.8 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           +S++       T +  +  I    +K+        +CE CG+ IPE R KI P    C +
Sbjct: 56  LSEDISLKQLSTHRDILKKIEEALRKLEEGTYG--ICEMCGDEIPEERLKILPFAIYCRD 113

Query: 61  CQAYQERQRK 70
           CQ   E   K
Sbjct: 114 CQEKIEMIEK 123


>UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfonatronospira thiodismutans ASO3-1
           RepID=C0GTL3_9DELT
          Length = 243

 Score = 61.8 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     +  +  I+    ++        +C++CG  I EAR +  P    C  C    E 
Sbjct: 57  ALDSQARSELNHIDHALDRMIIGNYG--ICDSCGQEISEARLQAVPWARYCRVCVNKAEE 114

Query: 68  Q 68
           +
Sbjct: 115 K 115


>UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YTEA B.subtilis
           ortholog n=1 Tax=Clostridium acetobutylicum
           RepID=Q97H97_CLOAB
          Length = 200

 Score = 61.5 bits (148), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
            A+   E+  +  I     K+   G    +CE CG PI E R +  P    CVECQ   
Sbjct: 64  MAFRKNEEALLNKIGNAIDKVEHGGYG--ICEVCGKPISEERLEFVPYAENCVECQNKL 120


>UniRef50_Q48285 Haemophilus somnus cryptic prophage genes, capsid scaffolding
          protein n=1 Tax=Histophilus somni RepID=Q48285_HAESO
          Length = 76

 Score = 61.5 bits (148), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A   TE +    I + +QK       V  C  C   IPE R+K   G   C++
Sbjct: 1  MTDQVDRANEYTEIMQQLAIQKHQQK-TREKSTVKYCLDCQEEIPEIRQKN--GYCRCID 57

Query: 61 CQAYQERQRKHY 72
          CQ   E+ ++ Y
Sbjct: 58 CQRIIEKHQRIY 69


>UniRef50_Q2LQQ9 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus
          SB RepID=Q2LQQ9_SYNAS
          Length = 86

 Score = 61.5 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 15/84 (17%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKIN---------------AHGIPVYLCEACGNPIPEA 47
          DE D A           +    ++ +               A      +C  CG  I  A
Sbjct: 2  DEIDHAQQHEAMHREIALREHFRRRDNYSERGRNPGLHPKGAGPGERRICRDCGEEIQPA 61

Query: 48 RRKIFPGVTLCVECQAYQERQRKH 71
          R    P    C+ECQ  +ER+ +H
Sbjct: 62 RLAAMPFAVRCIECQGIKERRERH 85


>UniRef50_C4LBC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Tolumonas
          auensis DSM 9187 RepID=C4LBC7_TOLAT
          Length = 76

 Score = 61.1 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 28/73 (38%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSD  D A  + +Q     + R  + +    +    C  C  PIP  R         CVE
Sbjct: 1  MSDVVDRANDLVQQRLDDEMARRHRDVEKPLVIHRFCFDCEQPIPAERLASIQSAKRCVE 60

Query: 61 CQAYQERQRKHYA 73
          CQA  E Q    A
Sbjct: 61 CQALFEEQEAIRA 73


>UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobacteria
           RepID=Q1MS84_LAWIP
          Length = 133

 Score = 61.1 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +           E+  +  I    Q+I+     V  CE CG+ I   R K
Sbjct: 52  ADPADRASAESDRAFTLRIRDRERRLIRKIQSALQRIDDGTYGV--CEDCGDDIGTPRLK 109

Query: 51  IFPGVTLCVECQAYQERQR 69
             P   LC+ C++ QE   
Sbjct: 110 ARPVTKLCINCKSRQEEGE 128


>UniRef50_Q9ZXI6 Orf39 n=3 Tax=root RepID=Q9ZXI6_9CAUD
          Length = 68

 Score = 61.1 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D+A    E +    +   ++           CE CG  IPEARR+  PG   C+ CQ
Sbjct: 2  DVIDQANERAENMVQAAL--AQRTNTRLAPSALWCEDCGEQIPEARRQAAPGCECCISCQ 59

Query: 63 AYQERQRKH 71
            +E   + 
Sbjct: 60 ELREHPARR 68


>UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gammaproteobacteria
           RepID=A5EW31_DICNV
          Length = 143

 Score = 61.1 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A    E           +  +  I++  ++I         CE C   I   R +
Sbjct: 58  ADLNDRASQEEEFSLELRTRDRERKLLRKIDKALERIKQGHFG--YCEQCDEEIGFHRLE 115

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC++C+   ER+ K +
Sbjct: 116 ARPTAELCIDCKHLAERKEKSF 137


>UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 Tax=Victivallis
           vadensis ATCC BAA-548 RepID=D1N407_9BACT
          Length = 133

 Score = 60.7 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            E +      E   +  I    +++         C+ CG PI E R  I P    CV+C+
Sbjct: 64  HEMELQLLSEEGDVLRLIEDAIKRLVDGEYGK--CQECGEPISEGRLAIRPYAVYCVKCK 121

Query: 63  AYQERQRKH 71
              E+Q  H
Sbjct: 122 EMHEKQGWH 130


>UniRef50_B0V602 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
          AYE RepID=B0V602_ACIBY
          Length = 72

 Score = 60.7 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A  +  QL    I       +     +  CE CGN IP  R++ +  VTLCVE
Sbjct: 7  MTDKIDIAQEL--QLKQVQIQ----PKDFSRPSLTECEECGNDIPIERQR-YGSVTLCVE 59

Query: 61 CQAYQERQRKHY 72
          C+  QE+  K Y
Sbjct: 60 CKNTQEKLSKRY 71


>UniRef50_B5TA71 Gp07 n=2 Tax=root RepID=B5TA71_9CAUD
          Length = 74

 Score = 60.7 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 4  EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
          E + A  + +      I   R + +  G     C  CG PIP ARR   P  T C ECQ 
Sbjct: 6  EFELAQQIEQMQRDVAIELARAQCH--GAGAEECVECGEPIPAARRACVPYATRCTECQG 63

Query: 64 YQERQRKHY 72
            E++R  Y
Sbjct: 64 RFEQRRTGY 72


>UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera araneosa HTCC2155
           RepID=A6DK24_9BACT
          Length = 147

 Score = 60.7 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +      E + +  + +  ++++        C  C + IPEAR    P   LCV C+ 
Sbjct: 69  EINLNVMSDEGIKVQLVQQAIERLDEGKYGR--CVDCRDDIPEARLDAIPYAKLCVACKE 126

Query: 64  YQERQR 69
            +E Q 
Sbjct: 127 TRESQG 132


>UniRef50_Q52PP5 Putative uncharacterized protein n=1 Tax=Xanthomonas phage Xp15
          RepID=Q52PP5_9CAUD
          Length = 77

 Score = 60.7 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVY-LCEACGNPIPEARRKIFPGVTLCVE 60
          +DE+D A  + E      I ++ +        V   C  C   IP+ R     G   C+ 
Sbjct: 5  TDESDLASKLEELAKEDAIQKVLRDGKVPSDWVSPDCYDCDQEIPKDRLAT--GAFRCIH 62

Query: 61 CQAYQERQRKHY 72
          CQ   E  +++Y
Sbjct: 63 CQTKFEFNQRNY 74


>UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 Tax=Myxococcales
           RepID=D0LZD2_HALO1
          Length = 124

 Score = 60.7 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 13/83 (15%)

Query: 1   MSDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           ++DE D A S +           E+  +  ++   +K+        +CE C  PI + R 
Sbjct: 43  LADEMDLASSESYQSFEFRLRGREKSLLNKLDLALRKLGEGTFG--ICEVCEEPIGKKRL 100

Query: 50  KIFPGVTLCVECQAYQERQRKHY 72
           +  P  TLC++C+  QER  + +
Sbjct: 101 EARPETTLCIQCKEAQERDERVF 123


>UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68
           Tax=Alphaproteobacteria RepID=A7HW84_PARL1
          Length = 146

 Score = 60.3 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A S TE+                I+   ++I+        CE  G PI   R  
Sbjct: 64  PDIADRASSETERSLELRTRDRQRKLVSKIDAAIRRIDEGTYG--YCEETGEPISLKRLD 121

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q   ER+ K Y
Sbjct: 122 ARPIATLSIEAQERHERREKVY 143


>UniRef50_P44221 Uncharacterized protein HI1497 n=3 Tax=Haemophilus
          RepID=Y1497_HAEIN
          Length = 75

 Score = 59.9 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQ------KINAHGIPVYLCEACGNPIPEARRKIFPG 54
          M+D  D+     E L    +           +++A       C  CG PIP  R +  P 
Sbjct: 1  MADVLDQLNEREEALLQNILAPHLDTELSDDEVDAIAEAGRQCSECGLPIPTTRLRANPF 60

Query: 55 VTLCVECQAYQERQR 69
             CV CQ   E  R
Sbjct: 61 AHRCVSCQQDWEEGR 75


>UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WW56_ALIAD
          Length = 213

 Score = 59.9 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 7   EAYSVTEQLTMTG----INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
              +V E+L        +     +I         CE+CG PIP  R +  P    CV+C+
Sbjct: 58  RNQAVGERLRDERALADVEDALSRIRQGTYG--QCESCGRPIPPDRLEAIPTTRRCVDCE 115

Query: 63  AYQERQR 69
              E ++
Sbjct: 116 REVEARQ 122


>UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopirellula baltica
           RepID=Q7UR73_RHOBA
          Length = 140

 Score = 59.9 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE +      E   +  I     +          CE CG PIP  R K  P    C+ C+
Sbjct: 53  DELNSQLVEVESRELLAIEEAIARFEEGRFG--DCEDCGKPIPLNRLKAIPYAVDCINCR 110

Query: 63  AYQERQ 68
              ER+
Sbjct: 111 RAAERE 116


>UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=A1QYW3_BORT9
          Length = 127

 Score = 59.9 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A S  E+  +  IN+   +I+ +      C AC   I   R    P   LC+ CQ  +E+
Sbjct: 64  ALSSVEKKKLHLINQALYRISQNTYG--NCLACDKSITRERLVAIPYAFLCISCQTKKEK 121

Query: 68  QRKH 71
           + K 
Sbjct: 122 KGKR 125


>UniRef50_B3B1J8 Conserved domain protein n=5 Tax=Gammaproteobacteria
          RepID=B3B1J8_ECO57
          Length = 75

 Score = 59.9 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRI--RQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D++D A +V E+ +   +     R++         +C  CG  IP AR    P    CV 
Sbjct: 2  DDSDRAQAVMERGSERALCNRLTRKRQAVDTPGRRVCADCGGEIPAARLVAVPDAIRCVN 61

Query: 61 CQAYQERQ 68
          CQ   E +
Sbjct: 62 CQNIMEAR 69


>UniRef50_Q8EDR9 C4-type zinc finger protein, DksA/TraR family n=1 Tax=Shewanella
          oneidensis RepID=Q8EDR9_SHEON
          Length = 71

 Score = 59.5 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQ----KINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M D+ D A  V +Q     ++R R+    + + +      C  CG  I   R    P   
Sbjct: 1  MIDQFDRAQEVEQQFRDNALSRQRKHKVEQPDINNKGERCCLDCGVVIEARRLVFMPTAV 60

Query: 57 LCVECQAYQER 67
           CVECQ  +ER
Sbjct: 61 RCVECQTAKER 71


>UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n=2
           Tax=Betaproteobacteria RepID=A1K6D2_AZOSB
          Length = 135

 Score = 59.2 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
             +  I   R++I        +C  CG  IP AR +  P  T CV CQ+  ER
Sbjct: 71  RELRDIEAARERIAEGE--AGICVDCGEEIPFARLEAQPTATRCVRCQSLYER 121


>UniRef50_A1F607 Conserved domain protein n=3 Tax=Vibrio cholerae
          RepID=A1F607_VIBCH
          Length = 76

 Score = 59.2 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRI--------RQKINAHGIPVYLCEACGNPIPEARRKIF 52
          MSD  D+A    ++     +N          +++ +        C +CG+ IP+ R +  
Sbjct: 1  MSDLFDKAQERDQEFLALALNNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQ 60

Query: 53 PGVTLCVECQAYQE 66
          P    CV CQ+ +E
Sbjct: 61 PEAVRCVSCQSRKE 74


>UniRef50_A4XZG1 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudomonas
          mendocina ymp RepID=A4XZG1_PSEMY
          Length = 72

 Score = 59.2 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPG--VTLC 58
          M+D  D A           +      +         CE CG+PIP  R +         C
Sbjct: 1  MADAVDIANDRMLDELDRRLANHA--LARQCPVAEECEDCGDPIPFERVQALAKLPCLRC 58

Query: 59 VECQAYQERQR 69
          VECQ Y ER+ 
Sbjct: 59 VECQGYHERKG 69


>UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35 Tax=Proteobacteria
           RepID=B4SQA3_STRM5
          Length = 405

 Score = 59.2 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 21/78 (26%), Gaps = 9/78 (11%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIP---------VYLCEACGNPIPEARRKIFP 53
           DEA+ A   TE           +K+                  C   G  I   R +   
Sbjct: 325 DEAERATRETENSLELRTRDRYRKLIGKIDSTLKRLEAGDYGYCVDTGEEIGLERLEARL 384

Query: 54  GVTLCVECQAYQERQRKH 71
                ++ Q   E  +K 
Sbjct: 385 TAERTIDAQERWEHLQKQ 402


>UniRef50_B7WXU2 Transcriptional regulator, TraR/DksA family n=1 Tax=Comamonas
          testosteroni KF-1 RepID=B7WXU2_COMTE
          Length = 76

 Score = 59.2 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKI----NAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D  D A +   QL    +    ++              C  CG  IPEARRK  PG  
Sbjct: 1  MTDFFDRAQARELQLREDALRDQTRRAGLSGKTEADSATECA-CGALIPEARRKAVPGCQ 59

Query: 57 LCVECQAYQERQR 69
           CV+C++ QER++
Sbjct: 60 RCVKCESAQERKK 72


>UniRef50_B2I3M6 Putative uncharacterized protein n=3 Tax=Acinetobacter
          RepID=B2I3M6_ACIBC
          Length = 66

 Score = 59.2 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D+A    + L    I     +    G     C  CG  IPE RR+   GV  C+E
Sbjct: 1  MTDLIDKAQESADYLLQQEIAN---RCRFEGESEKECVECGEEIPE-RRRALGGVKFCIE 56

Query: 61 CQAYQERQRK 70
          CQ   ER+R+
Sbjct: 57 CQTKLERKRR 66


>UniRef50_A8R990 Putative uncharacterized protein n=2 Tax=unclassified T4-like
          viruses RepID=A8R990_9CAUD
          Length = 85

 Score = 59.2 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 24/58 (41%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
              E +    I   R+++         C  C   IPEARR+   GV  C+ CQ+  +
Sbjct: 12 QLEMEAVVQAAIVHARKQVAVERESAKYCFDCDEEIPEARRQAIKGVIYCIGCQSMHD 69


>UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LWG8_BACS4
          Length = 242

 Score = 59.2 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A +   +  +  I+   + I         CE CG  IP  R +  P    C+  Q 
Sbjct: 62  EKDIALNEHSEQLLDEIDNALKAIEEGSYGK--CEVCGTDIPYERLEAIPNARRCI--QH 117

Query: 64  YQER 67
            +E+
Sbjct: 118 AEEK 121


>UniRef50_Q06424 Uncharacterized 8.2 kDa protein in gpA 5'region n=21 Tax=root
          RepID=YO82_BPP2
          Length = 74

 Score = 58.8 bits (141), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D       +L    IN    ++   G    +CE C  PIP ARR  +P  T CV 
Sbjct: 1  MPDNVDFIQEQQAELLERQINAA--RVKHCGASALVCEECDAPIPAARRAAYPSATRCVS 58

Query: 61 CQAYQERQRKHY 72
          CQ+  E + KHY
Sbjct: 59 CQSVFEAKNKHY 70


>UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium
           Ellin514 RepID=B9XR79_9BACT
          Length = 192

 Score = 58.8 bits (141), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 10/77 (12%)

Query: 1   MSD------EADEAYSVTEQLTMT--GINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+          I    ++I  +   V  CE  G PIP+AR +  
Sbjct: 82  MADSGTDNFDRDFALSLLSSDQDAIYEIEEALKRIEKNTYGV--CELTGKPIPKARLEAI 139

Query: 53  PGVTLCVECQAYQERQR 69
           P     V+ QA  E++ 
Sbjct: 140 PWTRFTVQAQAQLEKEG 156


>UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 Tax=Proteobacteria
           RepID=B5EG80_GEOBB
          Length = 118

 Score = 58.8 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKI---------NAHGIPVYLCEACGNPIPEARRKIF 52
            D  D A   +++     I    +K+                 +CE C   I EAR K  
Sbjct: 39  PDPTDRATQESDRTFELRIRDRERKLIVKIQEALARIEAGTFGICEVCEEDISEARLKAR 98

Query: 53  PGVTLCVECQAYQERQRK 70
           P  TLC++C+  QE++ +
Sbjct: 99  PVTTLCIDCKMEQEKKER 116


>UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria RepID=Q3A0W2_PELCD
          Length = 118

 Score = 58.4 bits (140), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKI---------NAHGIPVYLCEACGNPIPEARRKIF 52
            D  D A   +++     I    +K+                  CE C  PI   R +  
Sbjct: 39  PDPTDRASLESDRNFELRIRDRERKLIMKIRQALERIEQGTFGECECCEEPIGAERLRAR 98

Query: 53  PGVTLCVECQAYQERQRK 70
           P  TLC++C+  QER+ K
Sbjct: 99  PVTTLCIDCKTEQERKEK 116


>UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=B8J371_DESDA
          Length = 120

 Score = 58.4 bits (140), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +           E+  +  I     +I+       +CE CG+ I   R K
Sbjct: 39  ADPADRATAESDRAFTLRIRDRERRLIRKIQAALTRIDDGTYG--ICEDCGDDISIPRLK 96

Query: 51  IFPGVTLCVECQAYQERQR 69
             P   LC+ C+A QE   
Sbjct: 97  ARPVTRLCINCKAKQEEDE 115


>UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gracilis RM3268
           RepID=C8PIH5_9PROT
          Length = 118

 Score = 58.4 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D+ D A   T+                 I    ++I      +  CE+CG  I   R K
Sbjct: 40  ADDFDVASMNTDLSIEYSLNVNQQKAFLEIESALKRIENGTYGL--CESCGEQISLERLK 97

Query: 51  IFPGVTLCVECQAYQERQRK 70
           + P   LC+ C+   E+Q +
Sbjct: 98  VNPEARLCISCKEQAEKQNR 117


>UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium petroleiphilum PM1
           RepID=A2SLK5_METPP
          Length = 122

 Score = 58.4 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE D       Q  +  ++   Q++N        CE CG PI   R +  P    C++CQ
Sbjct: 55  DELDITLISHWQRELDEVSAALQRLNTGSYG--HCERCGEPIGLPRLRALPEARHCLDCQ 112

Query: 63  AYQER 67
              +R
Sbjct: 113 EQADR 117


>UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 Tax=Geobacter
           RepID=C6E710_GEOSM
          Length = 130

 Score = 58.4 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M  +A  A +   +  +T +   ++++         CE CG  I   R ++ P    CV 
Sbjct: 57  MLSDAGLAIADIRRNQLTALEEAQRRVEQGTYGK--CENCGEVIDIQRLRLMPFAAYCVS 114

Query: 61  CQAYQERQRK 70
           CQ  +E   K
Sbjct: 115 CQKEKEGPGK 124


>UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 Tax=Aquificales
           RepID=C1DXT7_SULAA
          Length = 144

 Score = 58.0 bits (139), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
             ++ T+  I+   +KI++      +CE CG  I E R +  P V LC++C   +E 
Sbjct: 56  QADRETLYLIDLALRKIDSGIYG--ICEECGAVIGEKRLEAIPWVRLCIDCSQNEEI 110


>UniRef50_C5S4P2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae
          RepID=C5S4P2_9PAST
          Length = 77

 Score = 58.0 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 8/74 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQK------INAHGIPVYLCEACGNPIPEARRKIFPG 54
          MSD+ D      EQL    +    +       I    +    C  CG PIP  R +  P 
Sbjct: 1  MSDDVDRIMEQDEQLLSLQLAPHLENQLSDDEIEQIALSGRDCIECGLPIPIQRLRAVPF 60

Query: 55 VTLCV--ECQAYQE 66
             C+   CQ   E
Sbjct: 61 AVRCICCCCQQDYE 74


>UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marine bacterium 311
           RepID=Q6SHS2_9BACT
          Length = 190

 Score = 58.0 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 11/81 (13%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGI---------PVYLCEA--CGNPIPEARRK 50
           +D++D A                +K+                  C    CG  I   R +
Sbjct: 107 ADDSDRATHEEGFTLEIKTRERERKLLTKIDQSVKGLSNHDYGFCLNPNCGVEIGIRRLE 166

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+  +E   K 
Sbjct: 167 ARPTARLCIDCKTLEEITEKQ 187


>UniRef50_UPI000190AE5D hypothetical protein Salmoneentericaenterica_13393 n=2
          Tax=Salmonella enterica subsp. enterica serovar Typhi
          RepID=UPI000190AE5D
          Length = 75

 Score = 58.0 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 1  MSDEAD--EAYSVTEQLTMTGINRIRQKIN-AHGIPVYLCEACGNPIPEARRKIFPGVTL 57
          MS + D   A + ++         IR  +     +    C  CG+ IP++RR+  PGV+L
Sbjct: 1  MSIDVDDSMAQNESQVNIDNRFAEIRAALRIKGHVSRRHCRDCGDEIPDSRRESIPGVSL 60

Query: 58 CVECQAYQERQRK 70
          C+ CQ ++E   K
Sbjct: 61 CMYCQEWRESGDK 73


>UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=D2L9K5_9DELT
          Length = 120

 Score = 58.0 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +++                I     +I+        C  CG  I  AR K
Sbjct: 39  ADPADRATAESDRAFTLRLRDRERRLIKKIKEALDRIDEGTYG--ECVECGEDISVARMK 96

Query: 51  IFPGVTLCVECQAYQERQR 69
             P  TLC++C++ QE   
Sbjct: 97  ARPVTTLCIKCKSRQEADE 115


>UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 Tax=Burkholderia
           multivorans RepID=A9AKZ2_BURM1
          Length = 256

 Score = 58.0 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A    +   +  I R +Q++         C  C  P+  AR +  P    C  CQA
Sbjct: 185 DVDHALIGMKLAELRAIRRAQQRMVDGSYG--DCIDCDGPVGYARLRARPTAERCTHCQA 242

Query: 64  YQERQ 68
             ER+
Sbjct: 243 LYERR 247


>UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA
           RepID=C1I8K1_9CLOT
          Length = 204

 Score = 57.6 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            A    E+  +  I+   + I+        C+ CG  I + R    P    C+EC+  
Sbjct: 64  RALEANERALLDKIDDAVRAIDEGSYGK--CQKCGKEIDKERLDFLPYALNCIECEDV 119


>UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus
           Koribacter versatilis Ellin345 RepID=Q1IJ15_ACIBL
          Length = 121

 Score = 57.6 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 3   DEADEA-----------YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D AD A            S  ++  +  +     +I         C +CG+ I   R + 
Sbjct: 41  DIADRATNSYTKEFLFTQSANDRNLLQMVEGALIRIGEGTYG--ECVSCGSEINSKRLEA 98

Query: 52  FPGVTLCVECQAYQERQR 69
            P    C+ CQ   E+  
Sbjct: 99  VPWARYCIGCQEKIEKGE 116


>UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 Tax=Geobacter
           RepID=B3EAN1_GEOLS
          Length = 218

 Score = 57.2 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A S             E+  +  I+    +I        +CE C   IP  R K+
Sbjct: 120 DIYDQASSERDRELGLLLNDREREKLHSIDEALLRIAEGEYG--ICEECDEDIPMGRLKV 177

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P    CV+C++  E+ +  
Sbjct: 178 LPFTRHCVKCKSDLEKFQAQ 197


>UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZKC1_PLALI
          Length = 152

 Score = 57.2 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           E   +  INR    I      V  C+ C   IP AR +  P  T+CVECQ  QE
Sbjct: 62  ETRELMQINRALALIEEGHYGV--CQKCSKAIPLARLQAVPFTTVCVECQRRQE 113


>UniRef50_A5EYQ4 DksA-like zinc finger domain containing protein n=8 Tax=root
          RepID=A5EYQ4_VIBC3
          Length = 69

 Score = 57.2 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI--PVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D  D+A     +     +   R +            C  C +PIP+ R++   G   C  
Sbjct: 2  DVIDDAAKTEAKFQQMALANHRARAMQTAYLPSRTHCLECDDPIPKERQEKVKGCQYCTP 61

Query: 61 CQAYQERQ 68
          CQA +E++
Sbjct: 62 CQAAKEQR 69


>UniRef50_C8N773 TraR/DksA family transcriptional regulator n=1
          Tax=Cardiobacterium hominis ATCC 15826
          RepID=C8N773_9GAMM
          Length = 69

 Score = 57.2 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D AD+A  + E           ++          CE CG+PIPEARR+ +P  T C ECQ
Sbjct: 2  DIADKAAEIEEMNRAQA--LAARRRIPAAPGCAECEDCGDPIPEARRRAYPSATRCTECQ 59

Query: 63 AYQERQRKHY 72
          A  ER  K+ 
Sbjct: 60 ARHERHAKNR 69


>UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1 Tax=Thiomicrospira
           crunogena XCL-2 RepID=Q31G85_THICR
          Length = 142

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 9/79 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGI---------PVYLCEACGNPIPEARRKIF 52
           +D +D A    E           +K+ +                C+  G  I  AR +  
Sbjct: 61  ADPSDRASQEEEFALELRTRDRERKLISKIDKSLRDIEDGDYGYCKMSGEEIGLARMEAR 120

Query: 53  PGVTLCVECQAYQERQRKH 71
           P  TL VE +  QE + K 
Sbjct: 121 PTATLTVEMKTKQEMREKQ 139


>UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10
           Tax=Thermoanaerobacteraceae RepID=B0K2T3_THEPX
          Length = 206

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           A    E+  +  I    +++        +C  C  PI E R +  P   LC EC
Sbjct: 67  ALKDNEKYILRQIEDAFKRMEIGTYG--ICAHCHKPIEEERLEALPYTVLCAEC 118


>UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromonosporaceae
           RepID=A4X6U9_SALTO
          Length = 132

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4   EADEAYSVTEQLTMT--GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           E D A S+   +            ++         CE CG  IP  R +IFP  T CV C
Sbjct: 66  ERDTAQSLLRTILDRRAQFEHALTRLEEGTYG--FCEGCGASIPVERLEIFPSATTCVTC 123

Query: 62  QAYQERQR 69
           +  +ER+ 
Sbjct: 124 KQTRERRA 131


>UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B6BSH6_9RICK
          Length = 180

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D+A S T++                I++   +I         C     PI   R  
Sbjct: 98  ADIVDQASSYTDKNVEMKAINRQIKLISEIDKALARIREDIYG--YCLDTAEPIGLKRLM 155

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P     +  Q   E+  K +A
Sbjct: 156 ARPVAKYTIAAQEKHEKDEKVHA 178


>UniRef50_A3EVE8 Putative uncharacterized protein n=1 Tax=Leptospirillum rubarum
          RepID=A3EVE8_9BACT
          Length = 52

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 25 QKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHY 72
           ++   G     C  CG  IP  RR++ PGV  C+ CQ  +ER    Y
Sbjct: 4  SRLQPKGDSALFCSDCGGVIPVKRRELVPGVKTCILCQKERERSSMEY 51


>UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Thermodesulfovibrio
           yellowstonii DSM 11347 RepID=B5YK78_THEYD
          Length = 123

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
           E+  +  I +  +KIN       +CEACG  IP  R +  P   LC+EC+  QE   K
Sbjct: 64  ERKLLKKIEKTLEKINNGTYG--ICEACGAEIPIERLEARPVTDLCIECKTEQEEAEK 119


>UniRef50_Q2WA51 DnaK suppressor protein n=1 Tax=Magnetospirillum magneticum AMB-1
          RepID=Q2WA51_MAGSA
          Length = 74

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 26/71 (36%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A    E      +   R +    G   Y C +CG  IP+ RR   PG   C  
Sbjct: 1  MADLADLAKEREEANREAALAAFRARARPTGESAYFCRSCGERIPDERRAAVPGTNHCTF 60

Query: 61 CQAYQERQRKH 71
          C         H
Sbjct: 61 CAQQITAASPH 71


>UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788757
          Length = 187

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           D A   T +  +  I+   Q+++        C  CG  IP  R +  P    C+E
Sbjct: 66  DLAIQETLERELEQIDAALQRMDQGEYGT--CAECGREIPYERLEALPYTAYCLE 118


>UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3 Tax=Clostridium
           RepID=A0Q071_CLONN
          Length = 206

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A    E   +  I+     +        +C  C N IP+ R +  P    CV C+  Q+
Sbjct: 64  IALEKAELEKLHEISESLYDMEHGTYG--ICRICKNQIPDDRLEAVPYAKYCVHCKNNQD 121

Query: 67  R 67
           +
Sbjct: 122 K 122


>UniRef50_A9ID32 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM
          12804 RepID=A9ID32_BORPD
          Length = 94

 Score = 56.8 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 4  EADEAYSVTEQLTMTGINRIRQKINAH--GIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          + + A  + E      +  +R +++    G     C  CG+ I  AR  + PG   C++C
Sbjct: 21 QYELAARLAEDERAAALEAVRARMSQEVRGSADGNCLDCGDAIAPARLAVLPGAARCMDC 80

Query: 62 QAYQERQRKHYA 73
          Q   E+Q+  +A
Sbjct: 81 QTAHEKQQTRHA 92


>UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family protein n=1
           Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX5_9PROT
          Length = 123

 Score = 56.8 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPV---------YLCEACGNPIPEARRKIF 52
            D  D+A    ++     I    +++                  C+ACG PI   R +  
Sbjct: 42  PDPTDQASMEIDRNFDLKIKDRERRLIKKIDQAIERIQNGEFGECDACGGPISVKRLEAR 101

Query: 53  PGVTLCVECQAYQERQRK 70
           P  TLC+EC+  QE++ +
Sbjct: 102 PVTTLCIECKTAQEQEER 119


>UniRef50_B6EIS7 Probable rRNA transcription initiatior protein,putative phage
          gene n=1 Tax=Aliivibrio salmonicida LFI1238
          RepID=B6EIS7_ALISL
          Length = 71

 Score = 56.8 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINA--HGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D  D A ++  + T   +     K            C  C   IP+AR++   G   CV 
Sbjct: 2  DAFDRASALEAKQTEVALANHMAKQKNKVEIKSAEECIECEKAIPKARQEAVKGCQYCVN 61

Query: 61 CQAYQER 67
          CQ   ++
Sbjct: 62 CQELADK 68


>UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           vulgaris str. 'Miyazaki F' RepID=B8DLC7_DESVM
          Length = 119

 Score = 56.5 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINA-HGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           M D     Y   +Q T T +  +R  +          C+ CGN IP AR    P  T CV
Sbjct: 42  MPDVEGMTYRSWKQRTETRLQVLRATLERLDDEDFGYCDDCGNEIPAARLLAVPTTTRCV 101

Query: 60  ECQAYQERQRKH 71
            C + +E +   
Sbjct: 102 HCMSAREERGAQ 113


>UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Cupriavidus
           metallidurans CH34 RepID=Q1LEV8_RALME
          Length = 123

 Score = 56.5 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     ++ +  I   R ++        +C  C  PIP  R + +P    C  CQ   E+
Sbjct: 60  AMREHYRVELEDIAAARGRMTLG--SYAICRECEEPIPFERLQAYPTAKRCTACQREHEQ 117

Query: 68  QR 69
           +R
Sbjct: 118 KR 119


>UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermobaculum
           terrenum ATCC BAA-798 RepID=D1CBT8_THET1
          Length = 126

 Score = 56.5 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A     +  +  I    ++++       +C  CG  IP  R    P    CV  Q 
Sbjct: 62  EKEIALQRNLRSVLNEIEAALKRMDEGTYG--ICIDCGQEIPIERLMARPYAVRCVADQE 119

Query: 64  YQER 67
             +R
Sbjct: 120 KYDR 123


>UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H0G2_UNCTG
          Length = 119

 Score = 56.5 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE D A   +E+             +  IN    KI  +      CE C N I   R K+
Sbjct: 41  DEIDTASQNSEKEMYFELVASDKMTLDAINDALVKIEKNAYGK--CEGCSNNILLERLKV 98

Query: 52  FPGVTLCVECQAYQE 66
            P    C++CQ   E
Sbjct: 99  IPWAKYCIQCQEESE 113


>UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter
           thermophilus DSM 20745 RepID=D1C120_SPHTD
          Length = 130

 Score = 56.1 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
                I R   K++        CE C  PIP  R +  P    C++CQA  +R++
Sbjct: 73  DRKVLIERAITKMDQGEYG--YCENCKRPIPPDRLEALPFARYCIDCQADMDRRQ 125


>UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11 Tax=Pseudomonas
           RepID=A5W685_PSEP1
          Length = 154

 Score = 56.1 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SD AD A    E+             +  +     +I         C+  G PI   R  
Sbjct: 72  SDPADVASVEEERSWLVNAIDRDQRLLPQLEMALDRIA--DESFGWCDDSGEPIGLKRLL 129

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           I P    C+E Q   E+  +H
Sbjct: 130 ISPTTKYCIEAQERHEQLDRH 150


>UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter butzleri RM4018
           RepID=A8EWK7_ARCB4
          Length = 123

 Score = 56.1 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
           +   +  I    +KI        +C+ CG  IP  R K  P    C EC+   E++ 
Sbjct: 63  QLDELKQIEEALKKITLGTYG--ICDMCGINIPLGRLKAKPFAKFCTECRTVYEQEN 117


>UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia RepID=Q2GEN7_NEOSM
          Length = 137

 Score = 55.7 bits (133), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D    A        ++ I+   +++         CE  G+ I   R  + P    CV+ Q
Sbjct: 61  DIIMSAQKRN--SLLSEIDEALERMEQGVYG--YCEETGDEIGFGRLDLEPTARYCVDVQ 116

Query: 63  AYQERQRK 70
              +++ +
Sbjct: 117 ERLDKKNR 124


>UniRef50_C0QW50 DNA-binding transcriptional regulator of transcription, DnaK
           suppressor protein n=2 Tax=Brachyspira
           RepID=C0QW50_BRAHW
          Length = 121

 Score = 55.7 bits (133), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
           S  E+  +  +N   ++I         C  C   I E R    P    CV C +  E ++
Sbjct: 59  SQKEKDKLDMLNNALKRIEEGTYGK--CIDCKEEINEERLTALPYTLRCVNCMSKYEDKK 116

Query: 70  KH 71
           + 
Sbjct: 117 RR 118


>UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR family n=2
           Tax=Cystobacterineae RepID=Q1D0G7_MYXXD
          Length = 130

 Score = 55.7 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 19/46 (41%)

Query: 17  MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           +  + +   K+         CE CG+ IP  R +  P    CV CQ
Sbjct: 66  LARVLKALGKLRDDPDAFGECEECGDEIPLGRLRAMPYAEFCVTCQ 111


>UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3 Tax=Comamonadaceae
           RepID=Q221D7_RHOFD
          Length = 124

 Score = 55.7 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + E + A    +   +  ++   ++I      +  C  CG  IP AR    P    C+ C
Sbjct: 55  ARELEFALDARDSEELDRLDAALRRIEDGSYGL--CVDCGVGIPAARLHAAPDALRCIAC 112

Query: 62  QAYQERQRKHYA 73
           Q   E+ +   A
Sbjct: 113 QEKLEKAQARQA 124


>UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LGY5_SYNFM
          Length = 257

 Score = 55.7 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 18  TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
             I+    KI        +CE+CG+ I   R +  P   LCV+C    E++
Sbjct: 65  EQIDLALGKIAIGEYG--ICESCGDDIALKRLEAIPWARLCVDCARDFEQR 113


>UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillus
           RepID=Q2B4E3_9BACI
          Length = 252

 Score = 55.3 bits (132), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D+A    +   +  +N+  Q I         C  CG  +P  R +  P    CV+
Sbjct: 63  EKDQAIEEHQNEELDKVNKALQAIEDGTYGK--CRECGKDLPFERLEAVPTALYCVD 117


>UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppressor protein homolog
           n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7S0_PSEFS
          Length = 138

 Score = 55.3 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
           E+     I     +I         C+  G PI   R    P  +   E Q   ER  KH
Sbjct: 76  ERAEAMAIKAALVRIEEDAYG--WCDDSGEPIGLKRLLNNPTASRTTEAQTRFERLGKH 132


>UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula
           staleyi DSM 6068 RepID=D2R5D7_9PLAN
          Length = 150

 Score = 55.3 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             E   +  I+R  +K+ A    +  C++CG PI   R +  P    C+EC    ER+ 
Sbjct: 60  EVESRELMQIDRAIEKMRAGRYGL--CDSCGGPIKLIRLQAVPYAIECIECARRDERRE 116


>UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 Tax=Paenibacillus
           RepID=C6D536_PAESJ
          Length = 234

 Score = 55.3 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A    E L +T I++  + ++        C ACG PIP+ R +  P    CVE    Q
Sbjct: 64  DLALLENEDLHLTRISQALEAMDNGTYG--QCRACGKPIPDERLEALPDSLYCVEHAPRQ 121

Query: 66  ERQRKH 71
           E   + 
Sbjct: 122 ETSHRQ 127


>UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14 Tax=Bacillaceae
           RepID=C9S0U4_GEOSY
          Length = 269

 Score = 55.3 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A     +  +  I R    I         C  CG PIP  R +  P    C E
Sbjct: 63  EKDLALKEHAERELREIERALGAIADGTYGT--CRVCGRPIPYERLEALPTTLYCRE 117


>UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas
           acidaminovorans RepID=B0VG86_9BACT
          Length = 148

 Score = 55.3 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
            +E+  +  +N   Q+I+       +CE CG  I E R +I P  T CV C+   E +++
Sbjct: 87  ESEREKIRQLNEALQRISDGTYG--ICEFCGEFIQENRLEIIPYATCCVACKEKNEDKKR 144

Query: 71  H 71
            
Sbjct: 145 R 145


>UniRef50_B0ZSI9 Putative uncharacterized protein n=1 Tax=Halomonas phage phiHAP-1
          RepID=B0ZSI9_9CAUD
          Length = 75

 Score = 55.3 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKI--NAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MSD AD A     +L      R  ++            C  CG  I   RRK  P    C
Sbjct: 1  MSDVADIAGEEQARLEEERAARWAREQAARESQAGSEYCVECGFDIDPRRRKAMPSAIRC 60

Query: 59 VECQAYQERQRKHY 72
            CQ + +R  K Y
Sbjct: 61 FGCQEFVDRTAKGY 74


>UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0ZG84_BREBN
          Length = 257

 Score = 54.9 bits (131), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A    ++ T+  I++  Q++      +  C  CG  IP  R +  P    C E
Sbjct: 63  EKDLALDSLDRETLKEIDQALQRMEEGTYGL--CTVCGEQIPVERLEALPQSQTCKE 117


>UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=10
           Tax=Gammaproteobacteria RepID=Q0A892_ALHEH
          Length = 149

 Score = 54.9 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 25/80 (31%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVTEQLTMTGIN-----------RIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DE D A    E      I            +  ++I         CE  G PI   R  
Sbjct: 68  PDEHDRATLEEEYQLELRIRERETRLLRKIDQALRRIETGEYG--YCEVTGEPIGIPRLL 125

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  TL +E +   E + +
Sbjct: 126 ARPTATLSIEAKERAEVEER 145


>UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=A0RK79_BACAH
          Length = 243

 Score = 54.9 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 13/68 (19%)

Query: 3   DEADEAYSVTEQLTMTGI-----------NRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  + E+    G+               QKI A      +CE  G  IP  R + 
Sbjct: 49  HPADMATELYEREKDFGLIELWHKQLEDTKHALQKIEAGTYG--ICEVSGEEIPFERLEA 106

Query: 52  FPGVTLCV 59
            P  T C+
Sbjct: 107 MPTATTCI 114


>UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificaceae
           RepID=Y250_AQUAE
          Length = 145

 Score = 54.9 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHY 72
           E  T+  I+   +KI        +CE CG  IPE R    P    C +C    ER+   Y
Sbjct: 64  EIATLREIDYALEKIEKGTYG--ICERCGEEIPEPRLCAIPWTRYCAKCAEEVERESGTY 121


>UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR family n=2
           Tax=Alcanivorax RepID=Q0VNX0_ALCBS
          Length = 140

 Score = 54.9 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A               +Q  +  I    +++         C+  G+PI   R  
Sbjct: 55  ADPLDAAVEEETCRHQLRFMARQQALLGKIRGALRRLQNGDYG--YCKISGDPIGLPRLL 112

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P    C E +A  E+  +HYA
Sbjct: 113 ARPTTEYCAEVKARLEQNERHYA 135


>UniRef50_Q1GXR9 Transcriptional regulators, TraR/DksA family n=1
          Tax=Methylobacillus flagellatus KT RepID=Q1GXR9_METFK
          Length = 72

 Score = 54.9 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D A  +  +    GI   + +    G     C+ CG  I + RR    GV  C+ CQ   
Sbjct: 5  DWAQEMELREREAGIAEKQLQALRSGPGYSHCKDCGEEIEKERR-AIKGVKRCIFCQERY 63

Query: 66 ER 67
          ER
Sbjct: 64 ER 65


>UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 Tax=Aquificaceae
           RepID=B4U7Z4_HYDS0
          Length = 118

 Score = 54.5 bits (130), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
           E   +  I     +I         CE CG  IP  R K  P  ++C+ C+  +E   
Sbjct: 62  ETKLLKKIEYTLARIENGTYG--YCEVCGAEIPYERLKARPVTSMCIRCKELEEENE 116


>UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2
           Tax=Planctomycetaceae RepID=D2R7B0_9PLAN
          Length = 123

 Score = 54.5 bits (130), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 10/72 (13%)

Query: 1   MSD--------EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D        E   +    +  T+  I    ++I A    V  C  CG  IP+AR ++ 
Sbjct: 50  MADVGTDNFEQEFTLSLMEHDGSTLEQIEAALERIEAGAYGV--CTECGCKIPKARLEVL 107

Query: 53  PGVTLCVECQAY 64
           P    CV+C   
Sbjct: 108 PYTAHCVKCAEK 119


>UniRef50_A4NCL4 Putative uncharacterized protein n=1 Tax=Haemophilus influenzae
          3655 RepID=A4NCL4_HAEIN
          Length = 78

 Score = 54.5 bits (130), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIR------QKINAHGIPVYLCEACGNPIPEARRKIFPG 54
          M+D  D+      Q+        R      + I         C+ CG  IP+AR    P 
Sbjct: 1  MTDILDQLVERESQIEALQQAARRINPLSAEAIQQIAEDGRNCDECGELIPKARLLAQPF 60

Query: 55 VTLCVECQAYQERQRKH 71
             CV+CQA  E+  K 
Sbjct: 61 ARCCVDCQALLEKTNKR 77


>UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X580_DESRD
          Length = 115

 Score = 54.5 bits (130), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 13/80 (16%)

Query: 1   MSDEADEAY-----------SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           ++D AD+A                   +  + +   ++      +  CE CG  I   R 
Sbjct: 38  LADPADQATLSTDRQLALLRQQRLLHQLHEVEQALHQLANGEYGL--CEECGEEIGVPRL 95

Query: 50  KIFPGVTLCVECQAYQERQR 69
              P   LC+ECQ   ER  
Sbjct: 96  VACPSARLCIECQEQLERAA 115


>UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 Tax=Chthoniobacter
           flavus Ellin428 RepID=B4D2T0_9BACT
          Length = 187

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +DE        +Q  +  IN    KI      V  CE  G PIP  R K  P      E 
Sbjct: 83  ADE-SRGVLSHDQDLLVEINHALSKIEEGTYGV--CELTGQPIPAERLKAVPWARFTREA 139

Query: 62  QAYQERQR 69
           QA  E + 
Sbjct: 140 QAEFEARG 147


>UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Desulfovibrio
           vulgaris RepID=Q72G22_DESVH
          Length = 176

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 13/76 (17%)

Query: 2   SDEADEAYSVTEQLTMT-----------GINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +DE + A  + E                 +    +++ A+   V  CE CG  IP AR K
Sbjct: 87  ADENEFASRLAEMALSVTLLHRAEHRIGLLENALRRLEAYDYGV--CEGCGEDIPVARLK 144

Query: 51  IFPGVTLCVECQAYQE 66
             P   LCV CQ   E
Sbjct: 145 ASPATRLCVFCQQESE 160


>UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26
           Tax=Alphaproteobacteria RepID=Q1GI88_SILST
          Length = 158

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A   T++                I+   ++I+        C+  G PI   R  
Sbjct: 76  PDVADRASEETDRALELRTRDRQRKLVAKIDAAIRRIDEGEYG--YCDVTGEPISLKRLD 133

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  T+ +E Q   ER+ K +
Sbjct: 134 ARPIATMSLEAQERHERREKVH 155


>UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae RepID=Q2GI38_EHRCR
          Length = 152

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A                +  +  IN+  Q+I+        CE  G  I  AR +
Sbjct: 57  ADLTDMATKEHNIVLILNTRKRNEALIIEINKAIQRIDDGLYG--YCEETGEKIGIARLE 114

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P     +E Q  +E+Q+K Y+
Sbjct: 115 ANPITLYSIEEQERREKQQKLYS 137


>UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F3S7_ACIC5
          Length = 139

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D AD+A    +Q             ++ +    +++         C  CG  I   R + 
Sbjct: 56  DPADQAVMSYQQELIFSQGTNKHTQLSLVRLALERLEDGSYG--ECAECGEDISPRRLEA 113

Query: 52  FPGVTLCVECQAYQE 66
            P    C+ CQ   E
Sbjct: 114 VPWTPYCISCQEKVE 128


>UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 Tax=Proteobacteria
           RepID=A0LCU1_MAGSM
          Length = 155

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKI---------NAHGIPVYLCEACGNPIPEARRKIF 52
           +D  D A   T++          +K+                  C  CG  I   R +  
Sbjct: 67  ADPTDRASLETDRNFELRTRDRERKLIGKIDRTIRTIEEDEYGFCSGCGVEIGLGRLQAR 126

Query: 53  PGVTLCVECQAYQERQRKHY 72
           P   LC++C+  +E+  + +
Sbjct: 127 PVTDLCIDCKTKEEQMERVH 146


>UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacteria
           RepID=Q2SLB9_HAHCH
          Length = 141

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D A               EQ  +  I +  ++I         C   G PI   R  
Sbjct: 60  SDENDRASREEQSAIALRIVDREQKLLPKIQQSLKRIRLGTYG--YCLESGEPIGIPRLL 117

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P    C E +A +E +  HY
Sbjct: 118 ARPTAEYCAEVKALKEIKEHHY 139


>UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q029W8_SOLUE
          Length = 149

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 22/75 (29%), Gaps = 13/75 (17%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D +    E              +  I     +++     V  C  C  PI   R  
Sbjct: 59  SDEGDLSQQHHEEWIFLNRNTIDMKLLREIADALHRMDTGHYGV--CPECEEPISAKRLD 116

Query: 51  IFPGVTLCVECQAYQ 65
             P    CV CQ   
Sbjct: 117 AVPWARYCVTCQEKI 131


>UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bilis ATCC 43879
           RepID=C3XG00_9HELI
          Length = 122

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D++     Q  M  I+    K +       +CE C + I   R +  P    C+ C+  
Sbjct: 54  FDDSMLERNQKEMKEISASLAKFDDGIYG--ICEMCEDEIGIERLQAKPHARFCINCREI 111

Query: 65  QERQRKH 71
            E+  K 
Sbjct: 112 YEKSEKQ 118


>UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 Tax=Rhodopirellula
           baltica RepID=Q7UEL7_RHOBA
          Length = 121

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            + +E   +  I    +++         CE CG  IP  R ++ P    CV CQ   E
Sbjct: 59  MAESESRELADIEEALERLRDGTFG--DCEDCGKSIPMNRLQVVPHARRCVRCQKASE 114


>UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396
           RepID=Q2SPR7_HAHCH
          Length = 107

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+   A  V  ++ +  + +  Q++      V  C ACG  IPE+R ++ P   LCV C 
Sbjct: 46  DDVLNALKVETEIEINQVKKALQRLQQGEYGV--CVACGEDIPESRLQVLPFAELCVSCA 103

Query: 63  AYQE 66
           +  E
Sbjct: 104 SKSE 107


>UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium
           ochraceum DSM 14365 RepID=D0LUD2_HALO1
          Length = 127

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHY 72
           E   +  I+   +++ A    +  CE CG  I   R    P  TLC++C++ +E+  +  
Sbjct: 64  ETFLLNKIDAALERLKAGT--IDECEECGGEISVQRLIARPVTTLCIDCKSEREQSEEGR 121

Query: 73  A 73
            
Sbjct: 122 T 122


>UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family n=1 Tax=Treponema
           denticola RepID=Q73KX9_TREDE
          Length = 119

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 3   DEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D AD A   T++  +             I+   ++I         C  C   IPE R K 
Sbjct: 42  DFADLASYSTDRDMLEFIGENNVKKLQKIDSALERIREGKYGK--CITCKEQIPEDRLKA 99

Query: 52  FPGVTLCVECQAYQERQ 68
            P    C+ CQA  E++
Sbjct: 100 LPYALKCIHCQAKSEKK 116


>UniRef50_C4WG44 Transcriptional regulator, TraR/DksA family n=1 Tax=Ochrobactrum
          intermedium LMG 3301 RepID=C4WG44_9RHIZ
          Length = 76

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          + A    EQ    GI   R  +         C  CG+ I   RR   P    CV+CQ   
Sbjct: 9  ELADMRAEQERDAGIAAARAPLKQT--GTLDCIRCGDEIEAERRAALPSARRCVDCQESF 66

Query: 66 ERQR 69
          ER +
Sbjct: 67 ERWQ 70


>UniRef50_Q0HYS5 Transcriptional regulators, TraR/DksA family n=3 Tax=Shewanella
          RepID=Q0HYS5_SHESR
          Length = 68

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D         E            K          C  CG+ IPE RR+   GV LCV CQ
Sbjct: 5  DLVTREQLRAEHRFEQQRKAQAAKPVP--PSATDCAECGDEIPEGRRQAILGVRLCVTCQ 62

Query: 63 AYQERQ 68
           ++E Q
Sbjct: 63 TWRESQ 68


>UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A882_GEMAT
          Length = 127

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 8/78 (10%)

Query: 1   MSDEADEAYSVT--------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D+  +A            E   +  +++  +++         C  CG  I   R    
Sbjct: 49  MADQGTDAMEREKAFLFASKEGRFLWHLDQALRRLYKAPATFGKCHQCGEDIAFERLDAL 108

Query: 53  PGVTLCVECQAYQERQRK 70
           P    C+ C+  +E  +K
Sbjct: 109 PNARYCIACKQREEDAKK 126


>UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A2J0_NATTJ
          Length = 216

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           E D   S   +  +  I    +KI         CE+CG  I   R    P    C+ C
Sbjct: 60  EKDTTLSNLREQKLREIEIALEKIANGDYGK--CESCGKEINNERLDAVPYTRYCISC 115


>UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 Tax=Fibrobacter
           succinogenes subsp. succinogenes S85 RepID=C9RQK2_FIBSS
          Length = 157

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +  E   +  +    ++I      V  C+ CG  IP+AR    P  T CV C+ 
Sbjct: 67  ETNLSLAAREGKYLVYLEEALKRIKNGTFGV--CKICGQLIPKARLMAVPTATKCVNCKE 124

Query: 64  YQERQR 69
             +++ 
Sbjct: 125 ETKKKE 130


>UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1Q506_9BACT
          Length = 140

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 10/74 (13%)

Query: 1   MSDEADEAYSVTEQLTMTG--------INRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   + Y     + +          I+   ++I        +CEAC   I   R K  
Sbjct: 65  MADVGTDNYERELMIELMQSGEDSVRSIDDALERIEEGTFG--ICEACEKKINRERLKAV 122

Query: 53  PGVTLCVECQAYQE 66
           P  +LCV CQ  +E
Sbjct: 123 PYASLCVNCQREEE 136


>UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 Tax=Elusimicrobium
           minutum Pei191 RepID=B2KE71_ELUMP
          Length = 258

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D A    ++  +             I    +KI+        CE C   +P+ R K 
Sbjct: 184 DPIDTATQSLDKEILFEQTDNSHTQIDQIESALRKIDKGIYGK--CENCRQLLPKKRIKA 241

Query: 52  FPGVTLCVECQAYQE 66
            P    CV CQ+ +E
Sbjct: 242 LPFARYCVVCQSSKE 256


>UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4 Tax=Geobacter
           RepID=Q39WX5_GEOMG
          Length = 130

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A +   +  +T ++    ++         C+ CG  I E R ++ P    C+ CQ  +E
Sbjct: 63  MAVADIRRQELTRMDEALGRLKEGRYG--FCDECGAEIDEGRLRVAPYAPCCISCQTRRE 120


>UniRef50_B9JYG7 DnaK suppressor protein n=2 Tax=Agrobacterium vitis S4
          RepID=B9JYG7_AGRVS
          Length = 72

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 5  ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           + A    EQ     +   R  +         C  CG  IP+ARR  +P    C +CQ  
Sbjct: 7  FELAEERIEQERDAKVAAARADLKKA--GATECLDCGRAIPQARRFAYPSAIRCFDCQVS 64

Query: 65 QERQ 68
           ER+
Sbjct: 65 IERE 68


>UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter
           thermophilus DSM 20745 RepID=D1C5L2_SPHTD
          Length = 132

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            +  ++    ++      V  C  CG  I  AR K  P  T C+ CQ + E +
Sbjct: 79  ELAEVDAALDRLERGTYGV--CIDCGEMIDPARLKALPTATRCLRCQTHFEYR 129


>UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subtilis group
           RepID=G16O_BACSU
          Length = 163

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D+     ++  +  +NR  QK+      V  CE  G  IP  R +  P   + VE QA  
Sbjct: 60  DQTVKEIDRELLEEVNRALQKMKDGTYGV--CEKTGQEIPYERLEAVPYARMTVEAQADV 117

Query: 66  E 66
           E
Sbjct: 118 E 118


>UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 Tax=Kangiella
           koreensis DSM 16069 RepID=C7R8Q8_KANKD
          Length = 120

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M     EA    ++  +  + +  ++I         C  C  PI   R ++ P   LC++
Sbjct: 52  MDQAMSEASVERDKKRLVAVRKALKRIEEGQYG--FCLECDEPISAKRLEVAPETELCLD 109

Query: 61  CQAYQERQRK 70
           CQ+++E   +
Sbjct: 110 CQSFKEEHDR 119


>UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q9W6_SULNB
          Length = 118

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D A    ++  +  I+    KI        +CE C  PI +AR ++      C+ C+  
Sbjct: 55  VDSAILEQQRKELAEIDLALDKIKNGTYG--ICEMCEEPIGKARLEVKNFARFCITCREI 112

Query: 65  QERQRK 70
            E++++
Sbjct: 113 NEKEQQ 118


>UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 Tax=Nautilia
           profundicola AmH RepID=B9L783_NAUPA
          Length = 117

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 13/79 (16%)

Query: 3   DEADEAYSVTEQLTMTGI-----------NRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEAD A +  +      I           N   +KI+       +CE C +PI EAR KI
Sbjct: 41  DEADFAAASMDSGRDYQIYINQKKELEEINDALKKIDEGTFG--ICEMCEDPIQEARLKI 98

Query: 52  FPGVTLCVECQAYQERQRK 70
            P    C+ C+   E++ K
Sbjct: 99  KPYAKYCIICREIIEKEGK 117


>UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 Tax=Ralstonia
           RepID=B2UIX3_RALPJ
          Length = 120

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +  +  +N  R+++  H     +C  CG  IP  R +  P    C+ CQ   ER+
Sbjct: 66  RSELEQLNAARERMQQHSYG--ICVDCGEAIPFLRLQAQPTAMRCLPCQTACERR 118


>UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=38 Tax=Burkholderia
           RepID=A0AZX7_BURCH
          Length = 130

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A    +   +  I R +Q++         C  C   +   R    P    C  CQ+
Sbjct: 59  DVDHALIGMKLTELRAIGRAQQRMRDGSYG--ECIDCDGSVGYERLLARPTAERCTHCQS 116

Query: 64  YQERQ 68
             ER+
Sbjct: 117 LYERR 121


>UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID=C6J3C7_9BACL
          Length = 245

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           D A +   +L +  +    ++I         C  CG PI   R +  P    C +
Sbjct: 66  DLALAEHHELHLARVEDALERIEDGSYG--YCATCGKPISYERLRAIPETAYCKD 118


>UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Planctomyces maris DSM
           8797 RepID=A6C001_9PLAN
          Length = 141

 Score = 53.4 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            +  E   +  I R    I         CE+C   IP AR K  P    CV C   +E
Sbjct: 49  LAEIEYKELMQIRRAISLIQEGRYG--HCESCNKNIPIARLKAVPYAMFCVSCAEQRE 104


>UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
           sp. JS666 RepID=Q12E87_POLSJ
          Length = 134

 Score = 53.4 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D A    EQ+    + R+    N        C  CG  I   R    P    C  CQA 
Sbjct: 65  VDHAAHELEQVL-AALRRLDDATNGKSPGYGHCLDCGEAIDLRRLAALPATPYCTACQAI 123

Query: 65  QERQRK 70
            E +R+
Sbjct: 124 HEHERQ 129


>UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX4_9PROT
          Length = 116

 Score = 53.4 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
           ++  +  I    ++I        +CE C  PI E R KI P    C+ C+   E++ K
Sbjct: 61  QKQELKEIEEALKRIEEGSYG--ICEMCDEPIQEERLKIKPYAKYCIICREIIEKEEK 116


>UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01TC0_SOLUE
          Length = 136

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            S  +  T+  ++   ++I         C  CG PI  AR +  P    C   Q   E
Sbjct: 70  NSSVDSETLQQVDDALRRIEQGSYGK--CVICGKPIEPARLEAIPWTPYCKADQERLE 125


>UniRef50_Q1AWF1 Transcriptional regulators, TraR/DksA family n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AWF1_RUBXD
          Length = 130

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D    +  +  +  + R  QKI      V  C+  G PIP+ R +  P     VE Q 
Sbjct: 63  EMDATVGLQTRRRLEDVERALQKIEEGTYGV--CDDTGEPIPKGRLEAMPEAIRTVEAQQ 120

Query: 64  YQERQRK 70
             +R R+
Sbjct: 121 RHDRVRR 127


>UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacteria RepID=DKSA_CAUCN
          Length = 142

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 9/70 (12%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGI---------PVYLCEACGNPIPEARRKIF 52
           +D AD A S T++         ++K+ +                CE  G PI  AR +  
Sbjct: 60  ADLADRASSETDRALELRTRDRQRKLISKIDQALRRVEDGSYGYCEETGEPIGLARLEAR 119

Query: 53  PGVTLCVECQ 62
           P  T+ VE Q
Sbjct: 120 PTATMSVEAQ 129


>UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
           sp. JS666 RepID=Q12HC6_POLSJ
          Length = 130

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             +Q  +  I + ++++         C  CG PIP  R K  P  + C+ CQ   E+ R
Sbjct: 66  QRDQEELRAIQQAQERMADGSYGG--CIDCGQPIPFERLKAQPSASRCIACQTRFEQGR 122


>UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacter
           RepID=Q7VGT4_HELHP
          Length = 118

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
           I    QKI      V  CE C + I   R K+ P    C+ C+   E+ +K
Sbjct: 67  IRNALQKIKDGTFGV--CEMCDDEIDVERLKVKPHAKYCINCRELFEQTQK 115


>UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID=B0SIE7_LEPBA
          Length = 154

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 14/84 (16%)

Query: 1   MSDEADEAYS-----------VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           M D AD A               E  T+  I    +KI        +CE     IP AR 
Sbjct: 52  MGDIADIASELNSEALTSVLTENEIETLREIELALEKIENGTYG--ICEGTKKKIPLARL 109

Query: 50  KIFPGVTLCVECQAYQERQRKHYA 73
           K  P     VE       + ++ A
Sbjct: 110 KAIPWTRFTVEFAEQM-AKSRNRA 132


>UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 Tax=Akkermansia
           muciniphila ATCC BAA-835 RepID=B2ULP7_AKKM8
          Length = 207

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 4   EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+   EQ  +  I +   +I+       +CE     IP  R +  P   L VEC
Sbjct: 110 DRDFALSLLSKEQDGLYEIEQALARIDNGTYG--ICEMSYKVIPILRLEAIPFARLTVEC 167

Query: 62  QAYQERQR 69
           QA  E+++
Sbjct: 168 QAQWEKEK 175


>UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9
           Tax=Campylobacterales RepID=A0RMM0_CAMFF
          Length = 122

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 9/79 (11%)

Query: 2   SDEADEAYSVTEQLTMTGI-NRIRQKINAHGIP--------VYLCEACGNPIPEARRKIF 52
           SDE D A    + +    I  + R ++N               +C+ C + I   R K+ 
Sbjct: 40  SDEFDFASINADAILEHSISAKQRSELNEIDESLKKIANRTYGICDMCEDEIDIERLKVK 99

Query: 53  PGVTLCVECQAYQERQRKH 71
           P    C+ C+   E+  K+
Sbjct: 100 PNAKYCITCREIIEKNNKN 118


>UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromonas macleodii ATCC 27126
           RepID=UPI0001AEC064
          Length = 140

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 24/79 (30%), Gaps = 9/79 (11%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGI---------PVYLCEACGNPIPEARRKIFP 53
           DE D A    E      I    +K+                  C   G PI   R  I P
Sbjct: 57  DEVDRAQYEEESRLSLRILDRERKLLPKIDKSLRRIKDKSFGYCLETGEPIGIPRLLIRP 116

Query: 54  GVTLCVECQAYQERQRKHY 72
               C + +   E + +HY
Sbjct: 117 VSEYCADVKMVNEGREQHY 135


>UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=B4UII3_ANASK
          Length = 144

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             ++  +  I+    +I+A      +C  C   I   R    P   LC EC   +ER +
Sbjct: 78  ENQRRELVQIDAAIARIDAGEYG--ICRDCEQDIDPRRLAALPYAVLCTECAQRRERAQ 134


>UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1SGF0_9ACTO
          Length = 103

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
            T +  +    +  ++++     V  CE CG  IP AR +I P    CV CQ  +
Sbjct: 51  ETARQGVADTAQALKRMSEGTYGV--CERCGQDIPTARLEILPSARFCVPCQQRR 103


>UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LMB8_SYNFM
          Length = 122

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 9/77 (11%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAH---------GIPVYLCEACGNPIPEARRKIFP 53
           DE D     TEQ  +  ++   +++                 +CE CG  I   R K  P
Sbjct: 42  DEVDRTSIRTEQEFLLHMHCRNERLVQEILNGLQRIRTGDFGVCEECGKDIELNRLKAHP 101

Query: 54  GVTLCVECQAYQERQRK 70
             T C++C+   ER+ +
Sbjct: 102 SATQCIKCKKAAERKAR 118


>UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Herminiimonas
           arsenicoxydans RepID=A4G7K6_HERAR
          Length = 106

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
             + D+A    E + +  I    ++I+ H   +  C  CG  I  AR +  P    C +C
Sbjct: 40  PTDVDDAMIKMELVELADIEAAHRRIDNHQYGL--CIDCGCTIDYARLQASPTAKRCTQC 97

Query: 62  QAYQERQ 68
           Q   E++
Sbjct: 98  QRLHEQR 104


>UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2
           Tax=Nitrosomonadaceae RepID=Q2YD37_NITMU
          Length = 131

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 8   AYSVTEQLTMTG-INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           A  V  Q+     +    +++         C  CG  I   R  ++P    CV CQ   E
Sbjct: 63  ANLVDRQVNEMREVEAALKRLADLDYG--DCIDCGGEIGFDRLMVYPTAQRCVRCQEVHE 120

Query: 67  RQRKH 71
           +   H
Sbjct: 121 KTYMH 125


>UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           aespoeensis Aspo-2 RepID=D1UB56_9DELT
          Length = 116

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQLTMTGINRIR-----------QKINAHGIPVYLCEACGNPIPEARRK 50
            DE D A  + +Q     + R R           +++         C+ CG+PI  AR K
Sbjct: 35  PDETDFATQLAQQGVNLAMQRRRMARIKEYECAIKRLRETDYGT--CDECGDPIGLARLK 92

Query: 51  IFPGVTLCVECQAYQERQR 69
             P   LC+ CQ+  E + 
Sbjct: 93  ANPSARLCIVCQSAAEEED 111


>UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum
           RepID=C6HWS3_9BACT
          Length = 121

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A               E+  +  I+   ++I        +CE CG  I E R  
Sbjct: 38  PDPADLASVEEIQGFSYRLKEREKKLLRKIDEALERIEEG--SFGICERCGEAIEEKRML 95

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  T C+ C+   E   +
Sbjct: 96  ARPVTTYCIACKTILEEAER 115


>UniRef50_Q2W8C2 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W8C2_MAGSA
          Length = 128

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+ D A    E      +  +  ++        +C+ C +PI   R  + P    C  C 
Sbjct: 52  DDIDCAAERIEAFRDVALKAVLNRMTGPRSS-GICKTCYDPIEPQRIAVNPHARHCSFCA 110

Query: 63  AYQERQRKH 71
           A +E+ ++ 
Sbjct: 111 AEEEQAQRQ 119


>UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 Tax=Pseudomonas
           RepID=B1J6V4_PSEPW
          Length = 143

 Score = 52.2 bits (124), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
             E+  +  I+   ++++        C+  G PI   R  + P  TL +E +  QER+ +
Sbjct: 81  EREKKLLDKIDEALERLSRGEYG--WCKETGEPIGLRRLLLRPTATLSIEAKERQERRER 138

Query: 71  H 71
           H
Sbjct: 139 H 139


>UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter RepID=C5EYJ0_9HELI
          Length = 119

 Score = 52.2 bits (124), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M +  D          +  I R  +KI        +CE C  PI   R K  P    C+ 
Sbjct: 49  MKNTLDGLIFEHHHKELEYIERALEKIENGEYG--ICEMCDEPISIQRLKAKPHARFCII 106

Query: 61  CQAYQERQRKHY 72
           C+   E+  K  
Sbjct: 107 CREIVEKDLKGR 118


>UniRef50_UPI0001AEFD73 hypothetical protein SghaA1_01734 n=1 Tax=Streptomyces ghanaensis
           ATCC 14672 RepID=UPI0001AEFD73
          Length = 111

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +D+         +  +T I+    +++        C+ CG  IP  R +I P    CV C
Sbjct: 49  ADDLLMMQKYAVRQALTDIDAAFTRLDEGTYGT--CQGCGRDIPVERLEILPYARCCVPC 106

Query: 62  QA 63
           Q 
Sbjct: 107 QQ 108


>UniRef50_Q2SPX6 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396
          RepID=Q2SPX6_HAHCH
          Length = 78

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D+A  + E+L  + + R R            C  C + IP  R++   GV+ CVEC+
Sbjct: 4  DILDQAAELQERLNASALARQRAGSALGQPSRAHCIDCEDAIPPLRQQ-LGGVSRCVECE 62

Query: 63 AYQERQRKH 71
           Y +  ++ 
Sbjct: 63 DYYQHAQRQ 71


>UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 Tax=Micrococcineae
           RepID=D1C0D4_XYLCX
          Length = 157

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
             +  +       ++I A       CE  G PI +AR + FP  TL VE +A +ER+
Sbjct: 103 NMRDLLAQTKHAIERIKAGTYAT--CEMTGLPIGKARLQAFPRATLSVEAKAREERR 157


>UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1JWV8_DESAC
          Length = 139

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHYA 73
             +  IN    +I         C   G  I   R   +P   L VE Q  +E + + +A
Sbjct: 79  RLLAQINAALLRIKEGSYG--YCVETGEEIGLRRLLAYPAAFLLVEVQEAREHRSRSFA 135


>UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus subtilis group
           RepID=YTEA_BACSU
          Length = 239

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           E D A  + E+  +  I    + I        +CE  G  IP  R +  P  T 
Sbjct: 63  EKDIALDLHEREHLRDIEHSLKAIENGTYG--ICEVSGKEIPFERLEALPTATT 114


>UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=D2B0C3_STRRD
          Length = 110

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A  V+ +  +  + +  + +         C+ CG  IP  R K  P    C+ CQ   E
Sbjct: 51  LADIVSAERNLAVVRQALRDVTELTYGR--CDGCGLAIPFERLKARPLARFCMLCQRRHE 108

Query: 67  RQ 68
            +
Sbjct: 109 SR 110


>UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ESP2_OCEIH
          Length = 224

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A     +  +  IN     I        +C  CG  IP  R +  P    CV+
Sbjct: 62  EKDIALQEHTEKELEDINAALHAIEEGTYG--ICTVCGEDIPHERLEAIPTTDRCVK 116


>UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp.
          128-5-R1-1 RepID=A8V318_9AQUI
          Length = 133

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 19 GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           I+   ++I+        CE CG PI E R +  P  TLC E     E+
Sbjct: 52 KIDEALERISEGTYG--YCEVCGKPIEEERLEAIPWTTLCTEHAKEAEK 98


>UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 Tax=Opitutaceae
           RepID=B1ZV03_OPITP
          Length = 297

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  +EQ  +T I+   ++I+       +CE    PI + R    
Sbjct: 195 MADAGTDTFDRDFALSLVSSEQEALTEIDAAIKRIHDGTYG--ICEITQKPIAKERLLAV 252

Query: 53  PGVTLCVECQAYQERQR 69
           P      E Q   E+ R
Sbjct: 253 PFTRYSAEAQKDLEKNR 269


>UniRef50_C9R760 Putative uncharacterized protein n=1 Tax=Aggregatibacter
          actinomycetemcomitans D11S-1 RepID=C9R760_AGGAD
          Length = 72

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTM--TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          M+D  D+     E +           Q+          C  CG  I  +R K  P    C
Sbjct: 1  MNDIVDKTQQRQEIMWANWRKQQVSAQQFAVAMNTARYCIDCGVLIHPSRVKAMPHCVRC 60

Query: 59 VECQAYQERQRK 70
          + CQ   E  +K
Sbjct: 61 ISCQQLHEESQK 72


>UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231
           RepID=A4BMT6_9GAMM
          Length = 132

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + + A        +  I    +K+         C  CG  I   R +  P V  C  CQ 
Sbjct: 61  DLNIAEIDRHVREIQRIEAALRKLADGSYG--YCMDCGEAIAAQRLQANPAVARCYACQT 118

Query: 64  YQERQR 69
             E++ 
Sbjct: 119 RFEQEE 124


>UniRef50_Q0EWC9 Putative uncharacterized protein n=1 Tax=Mariprofundus
          ferrooxydans PV-1 RepID=Q0EWC9_9PROT
          Length = 73

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAH----GIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D  D      E      ++R+R +             +C  C   IP AR    P   
Sbjct: 1  MADPCDMGSEREEISRQEALDRVRYRPLEAPLLDEEYRRICRDCECLIPSARLAAVPHAV 60

Query: 57 LCVECQAYQE 66
           C  CQ   E
Sbjct: 61 RCASCQEEHE 70


>UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus
          RepID=A8FE57_BACP2
          Length = 135

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              +      I+   +++        +CE  G  IP  R K  P     ++ +  +E  
Sbjct: 32 LDQVDDQLEAEIDAALKRMEDGTYG--ICEKTGKEIPYERLKAVPYTRYSIDAKKNEETT 89

Query: 69 R 69
          +
Sbjct: 90 Q 90


>UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium
           DG1235 RepID=B5JMU6_9BACT
          Length = 280

 Score = 51.4 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 10/75 (13%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  +EQ  +  I     +I        +CE  G  I E R    
Sbjct: 176 MADAGTDTFDRDFALSMVSSEQDALQEIEEAIDRIFKGTYG--ICEMTGKQIREERLMAV 233

Query: 53  PGVTLCVECQAYQER 67
           P     ++ Q   E+
Sbjct: 234 PFTRYSMKTQEQIEK 248


>UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbachia
           RepID=C0R4V6_WOLWR
          Length = 130

 Score = 51.4 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHY 72
                I    +KI         C+  G  I   R K  P    C+E Q   E+++  Y
Sbjct: 71  DRKEKIKEALEKIKLGTYG--YCDGTGEEIGVERLKANPLAIYCIEEQERVEKEKNVY 126


>UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax=Cupriavidus
           RepID=Q473A0_RALEJ
          Length = 124

 Score = 51.4 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     +  +  I   R+++ A       C  CG  IP +R + +P    C +CQ   ER
Sbjct: 60  AMLEHYRTELADIRAARERMKAGQYGT--CTDCGEAIPYSRLQAYPTARRCADCQRGHER 117


>UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LTL7_DESBD
          Length = 133

 Score = 51.1 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 2   SDEADEAYSVTEQL-----------TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD+A S + +             +  I    + I+       +CE CG  I + R  
Sbjct: 41  PDLADQACSASSRDWNVIRYNRNVKLLKDITVALKAIDNDSYG--ICEMCGEHIADRRLL 98

Query: 51  IFPGVTLCVECQAYQER 67
             P    C+ECQ   +R
Sbjct: 99  AIPSALFCIECQEMIDR 115


>UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13 Tax=Clostridium
           RepID=C6Q1P6_9CLOT
          Length = 201

 Score = 51.1 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 22/71 (30%), Gaps = 13/71 (18%)

Query: 3   DEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             +D A  + ++                I      I+        C  CG  I E R + 
Sbjct: 49  HPSDIATEIFDKERGIAFKGNELSIIKKIENSLSNIDKGTYGK--CSICGKDIKEERLEF 106

Query: 52  FPGVTLCVECQ 62
            P    CVECQ
Sbjct: 107 IPYTDHCVECQ 117


>UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RLG0_CLOCL
          Length = 199

 Score = 51.1 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 6/64 (9%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ----A 63
           A    E   +  IN     +      +  C  C   I + R    P    C +CQ     
Sbjct: 66  ALKANETNMLGKINEALDALENGDYGL--CGNCQKEITKERLDFLPYAKYCAKCQGIMHT 123

Query: 64  YQER 67
            +ER
Sbjct: 124 LRER 127


>UniRef50_Q6U9H2 Putative uncharacterized protein n=2 Tax=unclassified T4-like
          viruses RepID=Q6U9H2_9CAUD
          Length = 84

 Score = 51.1 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 16 TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
              ++ IR      G     CE C  PIPEARR        CV+CQ   +
Sbjct: 19 LDNALDFIRST-QYKGDTPEFCEECDEPIPEARRMAISTA-YCVQCQTVHD 67


>UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           salexigens DSM 2638 RepID=C6C0K2_DESAD
          Length = 116

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A  V E   +  +     +++       +CE CG  I  AR K  P    CV CQ+ 
Sbjct: 49  INLALHVRETKLIIDMEETLSRVDNWDFG--ICEDCGEEIALARIKANPTTRFCVSCQSR 106

Query: 65  QE 66
            E
Sbjct: 107 ME 108


>UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1
           Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571
           RepID=C6PE95_CLOTS
          Length = 207

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           A    EQ  +  I+    ++        +C  C   I   R +  P  +LC  C
Sbjct: 67  ALKDNEQHVLRQIDDALLRMVKGQYG--ICNHCHKEIELDRLEALPYTSLCANC 118


>UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family protein n=3
           Tax=Proteobacteria RepID=Q0AHN9_NITEC
          Length = 135

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           I     +I      +  C  CG P+   R   +P    C  CQ  +ER
Sbjct: 80  IVAAEDRIATGKYGL--CIDCGEPVRYKRLDAYPTAKRCFTCQVRRER 125


>UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6FZV7_9DELT
          Length = 130

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M+     + +      +  I      I+       +CE C  PI   R ++ P V++CV+
Sbjct: 49  MTQSIASSRNRERAQKLAAIREALLLIDEDPEEYGMCEDCEEPIKRRRLELMPWVSVCVQ 108

Query: 61  CQAYQERQRK 70
           CQ  +ER  +
Sbjct: 109 CQEKRERDGR 118


>UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 Tax=Thiomonas
           intermedia K12 RepID=C7HYG4_THIIN
          Length = 128

 Score = 50.7 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D  + A +  +   +  I+   Q+++       +C  CG  I  AR      V  C  CQ
Sbjct: 56  DAVEIASTARDATELAAIDNALQRLD--TPDFGICIDCGADIEPARLLAESTVLRCTACQ 113

Query: 63  AYQERQ 68
              E Q
Sbjct: 114 QRFEHQ 119


>UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=A7HEW6_ANADF
          Length = 130

 Score = 50.7 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 23/56 (41%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +   +  I+R   K+ +      LCE C   I   R  + P  T C  CQA  E +
Sbjct: 63  QAELVARIDRALAKLASAPEDFGLCEDCEEEIAPGRLAVMPYATRCPACQAKTEPR 118


>UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3
           Tax=Epsilonproteobacteria RepID=Q30RD2_SULDN
          Length = 116

 Score = 50.7 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A    ++  +  IN    KI        +CE C +PI   R K+ P    C++C+  
Sbjct: 54  IESAIVHQQEQELREINVTLGKIATGDYG--ICEMCEDPIGFQRLKVKPHAIYCIDCREI 111

Query: 65  QERQR 69
            E+ R
Sbjct: 112 VEKSR 116


>UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 Tax=Desulfovibrio
           vulgaris RepID=A1VGY3_DESVV
          Length = 113

 Score = 50.3 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           T +  + G+    +++         C  CG  IP AR    P  + CV C  
Sbjct: 62  TARKRLAGLEYAVKRLGDDDPEYGYCVECGEAIPFARLMSMPEASRCVNCAE 113


>UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1 Tax=Acidothermus
           cellulolyticus 11B RepID=A0LSA0_ACIC1
          Length = 113

 Score = 50.3 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     Q     +    Q+I      +  C +CG P+PE R +  P    C+ CQA  E 
Sbjct: 54  ALLEVAQEQRRQVLEALQRIENGTYGL--CVSCGAPLPEGRLEAKPEAARCLSCQAKLEA 111

Query: 68  QR 69
            R
Sbjct: 112 GR 113


>UniRef50_C6BZJ9 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           salexigens DSM 2638 RepID=C6BZJ9_DESAD
          Length = 115

 Score = 50.3 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            +++     +  +  +     ++         CE CG  IP AR    P    CV C  +
Sbjct: 54  INKSSIAQSRQRILNLEDALNRLEKDSF-FGECEECGEDIPLARLLTLPESRYCVYCAEH 112

Query: 65  QE 66
            E
Sbjct: 113 LE 114


>UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus
           oremlandii OhILAs RepID=A8MH72_ALKOO
          Length = 226

 Score = 50.3 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
               E+  +  I+   QKIN        C+ CGN I E R +I P    C++C   +
Sbjct: 67  LENHEKNRLLEIDDAVQKINEGTYG--NCQICGNKILEERLEIMPASITCIDCAEKE 121


>UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1
           Tax=Geodermatophilus obscurus DSM 43160
           RepID=D2S7M9_9ACTO
          Length = 106

 Score = 50.3 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M D      + +   T+  I    ++I A       C  CG+ +P  R +  P    CV 
Sbjct: 44  MPDLVTVNRAASLLRTIEEIEAALERIAAGTYGT--CVRCGSAVPAERLEFRPFAAACVS 101

Query: 61  CQAYQ 65
           CQ  +
Sbjct: 102 CQETR 106


>UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9
           Tax=Gammaproteobacteria RepID=A8GD52_SERP5
          Length = 141

 Score = 49.9 bits (118), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEAD+A               E   +  I+    +++        C   G PI  AR  +
Sbjct: 59  DEADKAAREEDLRLLFRQLDRESRLLPKISAALTRLHNGEYG--YCRESGEPIGLARLLL 116

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P   L +E +  QE +  H
Sbjct: 117 RPTAELSIEAKTAQEMREPH 136


>UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudovibrio
           sp. JE062 RepID=B6R7R7_9RHOB
          Length = 118

 Score = 49.9 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +A        +  I+   Q+I         C  CG  IPEAR ++ P    CV C
Sbjct: 61  QANDRQRARELQRIDGALQRIKEEEYG--FCLECGEDIPEARLRVDPAALYCVSC 113


>UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGP9_BDEBA
          Length = 126

 Score = 49.9 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               ++  +  I R   KI         CE+C   I   R ++ P   LC++C   QE Q
Sbjct: 64  LHERDRTALYAIERALGKIADGTYG--QCESCSEIINARRLQVRPFTALCIDCMEEQESQ 121


>UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 Tax=Desulfovibrio
           vulgaris RepID=A1VFA5_DESVV
          Length = 118

 Score = 49.5 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A     +  +  +     + +        C+ CG+ I   R    P   LC+ C   +E
Sbjct: 55  RANIEQLKGRLRSLRTALARTDDEEFG--WCDECGDAIGVQRLLSVPTTRLCIACARRRE 112


>UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID=Q1D808_MYXXD
          Length = 130

 Score = 49.5 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
            +++  +  I+   ++++        C  CG  IP  R +  P    C E  +  E + +
Sbjct: 64  ESQRREIMLIDAALRRMDMGVFG--ECVDCGFEIPIERLEALPFAIRCEEDASIHELETR 121


>UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea
           34H RepID=Q48AS1_COLP3
          Length = 104

 Score = 49.5 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
              +L ++ +    ++I         C  C  PI   R    P  T C++C
Sbjct: 54  HEAKLELSLVKSALKRITEGLYGS--CVECEEPINPDRLSALPYTTKCIKC 102


>UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q021L0_SOLUE
          Length = 129

 Score = 49.5 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 13/77 (16%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D+  +   +                +    ++I        +C+ C   I   R +
Sbjct: 36  PDTLDQVQNAAARALAIRQLELDHKRMRGLRDALERIEDGSYG--ICQRCDEDISLKRLR 93

Query: 51  IFPGVTLCVECQAYQER 67
           + P  + C+ CQ   + 
Sbjct: 94  VVPWASYCLRCQESADH 110


>UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4
           Tax=Hydrogenothermaceae RepID=B2V854_SULSY
          Length = 147

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            S  E   +  I+   ++I        +CE CG  I E R +  P  TLC++    QE
Sbjct: 60  LSDVEIEILKAIDDTLERIQNGTYG--ICEVCGKEIEEERLEAVPWTTLCIQHAKEQE 115


>UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA family protein n=1
           Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CE0
          Length = 253

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 2/62 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D      E            +I+        C +CG  + E R    P V  CV C  
Sbjct: 61  ELDTTLLENETYLRDEAVAALGRIDDGTFGR--CTSCGGDVGEERLDALPYVRQCVACAQ 118

Query: 64  YQ 65
            +
Sbjct: 119 AE 120


>UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3
           Tax=Anaeromyxobacter RepID=B8J655_ANAD2
          Length = 122

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A +   +             +  +     +++A       C +CG PI  AR +
Sbjct: 43  PDPNDRATAEERRNWALRLRDRDRRLLGKVQAALARLDAGTFGT--CTSCGAPISAARLR 100

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC+ C+   ER  +  
Sbjct: 101 ARPVTDLCIACKTEAERVERPR 122


>UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q02C95_SOLUE
          Length = 128

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
             +  +     ++ +      +C AC   I E R +  P    CV+CQ   
Sbjct: 66  RQLRMVEEALDRLESGDFG--ICLACDESIAEKRLQALPWARYCVKCQDEM 114


>UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis
           HTCC2594 RepID=Q2NBT1_ERYLH
          Length = 104

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           DEA E      +  +  +     +I         C  CG PIP+ R +  P  T C++C
Sbjct: 47  DEALEGVDDVLRAEIQQVRYALARIENGSYGT--CAKCGEPIPKERLEARPIATRCIKC 103


>UniRef50_Q602X1 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus
          RepID=Q602X1_METCA
          Length = 91

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 16/86 (18%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYL----------CEACGN------PI 44
          M D AD +    E   + GI  +   +      V +          C  C N      PI
Sbjct: 1  MPDLADLSDERIEIERVAGIRAVLDSMRPDTPQVVIPGEDGLPMVVCYDCLNEYEVITPI 60

Query: 45 PEARRKIFPGVTLCVECQAYQERQRK 70
          P  R         C++CQ   ER+ K
Sbjct: 61 PPERLAANEHAIRCIDCQIEHEREAK 86


>UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus
           asiaticus 5a2 RepID=B3ES66_AMOA5
          Length = 138

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
             E      +     +IN        CE  G+PI   R   FP      E Q  ++
Sbjct: 81  QNEDFLKREVEDALYRINLGTYG--YCEETGDPIGVRRLLAFPMARYTTEVQKQKD 134


>UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01U65_SOLUE
          Length = 129

 Score = 49.1 bits (116), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 21/79 (26%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  DE     E+                +     ++      V  C  C   I   R  
Sbjct: 36  PDAIDEVQLAGERELAIRNLDRESNLLRNVKGALVRVADGSYGV--CMHCEEDIKPKRLD 93

Query: 51  IFPGVTLCVECQAYQERQR 69
             P    C++CQ   +R  
Sbjct: 94  AVPWTKYCIKCQEAADRHE 112


>UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2
           Tax=Streptosporangineae RepID=D1ACI4_THECD
          Length = 121

 Score = 49.1 bits (116), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +++AD A     +   + +    Q+I A       C  CG PI   R +  P    C+ C
Sbjct: 56  AEQADAALERLRRQRNSVLA-ALQRIAAGTYGR--CVTCGKPIAAGRLEARPDAARCLTC 112

Query: 62  QAYQERQRK 70
           QA  +R R+
Sbjct: 113 QARYDRARR 121


>UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus
           metalliredigens QYMF RepID=A6TRY0_ALKMQ
          Length = 224

 Score = 49.1 bits (116), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
               E+  +T I+R  +KI         C+ CG  IP+ R ++ P   +C+ C
Sbjct: 67  LENHERYRVTEIDRALEKIQEGTYG--ECQLCGQGIPDERLEVMPEANICMVC 117


>UniRef50_B8J2D3 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774
           RepID=B8J2D3_DESDA
          Length = 130

 Score = 49.1 bits (116), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 9/77 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRI---------RQKINAHGIPVYLCEACGNPIPEARRKIF 52
           SDEAD A  +          R          R            C  CG  IP  R    
Sbjct: 34  SDEADAASHMEAAYIACCRARRSVQRIHDLERLLHLLRHNGPRQCVDCGEDIPLKRLVAA 93

Query: 53  PGVTLCVECQAYQERQR 69
           PG   C  CQ  +ER  
Sbjct: 94  PGTVRCFSCQQQEERAA 110


>UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 Tax=Shewanella
           RepID=B1KFH6_SHEWM
          Length = 131

 Score = 48.8 bits (115), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 3/61 (4%)

Query: 9   YSVTEQLTMTGINRIRQKINA---HGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
                Q +   + +   +I            C  CG PI   R  I P   +C+ CQ+  
Sbjct: 69  QQEMAQASEVLMQQHIVRIKQIFLDTDEYGFCLECGEPIGLGRLTIHPTAEMCIGCQSEA 128

Query: 66  E 66
           E
Sbjct: 129 E 129


>UniRef50_B7J8S5 Putative uncharacterized protein n=1 Tax=Acidithiobacillus
          ferrooxidans ATCC 23270 RepID=B7J8S5_ACIF2
          Length = 104

 Score = 48.8 bits (115), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQ------KINAHGIPVYLCEACGNPIPEARRKIFPGV 55
          SD  D A  + EQ     ++  RQ      K +        C  C + IP  R +     
Sbjct: 6  SDILDIAADLAEQERAWRVSVARQAMQASEKPDEDVAGNRYCLDCADVIPPERVQAVQ-A 64

Query: 56 TLCVECQAYQERQR 69
            CV C   +E++ 
Sbjct: 65 VRCVVCAGIREKKA 78


>UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani
           RepID=Q3JAV6_NITOC
          Length = 132

 Score = 48.8 bits (115), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A        +  I +   +         +C  C   I   R +I P V  C +CQ 
Sbjct: 61  DIDLAIVDLHIEEIRNIEQALMRFPKGNYG--ICIDCNTDIDYQRLQINPTVKRCFDCQT 118

Query: 64  YQERQRKHYA 73
             ER  +  A
Sbjct: 119 RHERTHREKA 128


>UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=Bacillus pseudofirmus OF4
           RepID=UPI0001C4239D
          Length = 215

 Score = 48.8 bits (115), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 13/69 (18%)

Query: 3   DEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
              D A  + ++                IN+    I        +CE CG PIP  R + 
Sbjct: 50  HPGDLATELHDRELEAALDQHSKDELEEINQALAAIEDGTYG--ICEVCGEPIPFERLEA 107

Query: 52  FPGVTLCVE 60
            P     +E
Sbjct: 108 LPTARRRIE 116


>UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QJK4_DESAH
          Length = 114

 Score = 48.8 bits (115), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            +EA     ++T++ + R   +I        LC AC  PIP AR  I P   LCV+C
Sbjct: 54  MNEAALKRARITLSKLERALARI--GSPDFGLCSACEEPIPFARLMILPETELCVKC 108


>UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbinolicus DSM 2380
           RepID=Q3A5P4_PELCD
          Length = 127

 Score = 48.8 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
           +  +  I+   +++         CEACG  I  AR +I P    C+ C+   E++ K
Sbjct: 63  REEILEIDEALERLRDGSYGR--CEACGKTIDIARLEILPFTRRCLTCRQEAEKEAK 117


>UniRef50_A4TVR6 DnaK suppressor protein n=3 Tax=Magnetospirillum
          RepID=A4TVR6_9PROT
          Length = 76

 Score = 48.8 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D+ D A    +      +  +  +  +      +C ACG  I   R +  P    C EC 
Sbjct: 2  DDIDCAAERIDAFNAVALQAVLAR-TSGAPSSGICRACGCDIEPERLRATPHARHCKECA 60

Query: 63 AYQERQRKHY 72
          A  E + + +
Sbjct: 61 AEIEAENRRH 70


>UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Poribacteria sp. WGA-A3 RepID=D2MJ83_9BACT
          Length = 123

 Score = 48.4 bits (114), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   +           I+     +        +C  C   I E R  + P   LCVECQ 
Sbjct: 51  EMGISLQEKRNRERQMIDEALVSLEEGTYG--ICVECNTEISEKRLAVMPFARLCVECQE 108

Query: 64  YQERQRK 70
             E   K
Sbjct: 109 KIELLEK 115


>UniRef50_Q1VTU7 General stress protein, DnaK suppressor DskA n=1 Tax=Psychroflexus
           torquis ATCC 700755 RepID=Q1VTU7_9FLAO
          Length = 127

 Score = 48.4 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 22  RIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           R   KI      +  C+ C   IP AR +I PG   CV C
Sbjct: 82  RAMDKIEEGTYGL--CDVCKKEIPRARLEIVPGALSCVVC 119


>UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium tetani
           RepID=Q894D3_CLOTE
          Length = 210

 Score = 48.4 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
            A+   E   +  I    + I         C+ CG  I E R +  P    C+ECQ   
Sbjct: 64  LAFKGNEINILNKIESSLESIEKGQYG--NCKNCGKRINEDRLEFIPYAENCIECQKEL 120


>UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes
           RepID=Q7MQQ3_WOLSU
          Length = 113

 Score = 48.4 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +  +  +  +     +I++      +C+ C  PIP  R    P  T+CV+C   +
Sbjct: 60  LDLEARLKKLEYALTRIDSPDFG--ICQICDEPIPYKRLFALPEATICVDCANER 112


>UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           aespoeensis Aspo-2 RepID=D1U5V5_9DELT
          Length = 111

 Score = 48.4 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A     ++ +  +    ++++       LC  C  PIP AR K  P    CV+C  
Sbjct: 57  AQLSKTRVRLARLGEALRRVD-DDEDFGLCIDCSKPIPMARLKAMPETQYCVDCAE 111


>UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BN62_9GAMM
          Length = 122

 Score = 48.0 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     Q  +  I+   QKI+A       C+ACG  I  AR    P   LC+ CQ  QE+
Sbjct: 62  ANLAQCQERIRQIDEALQKIDAEDYG--YCDACGERIALARLNARPESPLCISCQEKQEQ 119


>UniRef50_B6YQN7 DnaK suppressor protein n=1 Tax=Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2 RepID=B6YQN7_AZOPC
          Length = 125

 Score = 47.6 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +       Q   + +    ++I        +C   G  IP+ R +  P  TL +E + 
Sbjct: 66  ETNRLAQRQLQFMQS-LKAALKRIENKTYG--ICRITGELIPKKRLRAVPHSTLSIEAKK 122

Query: 64  YQE 66
            +E
Sbjct: 123 KKE 125


>UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM
           5159 RepID=B9KZU6_THERP
          Length = 133

 Score = 47.6 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D+    T +  +  +    ++I+       +C  C  PI   R +  P    CV  Q 
Sbjct: 63  EYDQTMLRTLEEELHEVLAALERIDQGTYG--ICVDCKRPIERERLEAVPWAVRCVADQE 120

Query: 64  YQERQ 68
             ER+
Sbjct: 121 RFERE 125


>UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WGI4_BACSK
          Length = 174

 Score = 47.6 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
             +Q  +  I    ++I        +C   G PIP  R +  P      E Q  +E
Sbjct: 66  EADQKRLQDITEALERIEEGTYG--ICIDTGQPIPYERLEALPYAKRTPEAQREKE 119


>UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinomycetales
           RepID=A4F8B9_SACEN
          Length = 125

 Score = 47.6 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
             +  +  ++R   +++     +  CE CG+PI   R +  P  T C+ C  ++
Sbjct: 73  DARRDLEALDRAAARLDDGTYGL--CERCGSPIAPERLEALPATTTCIACATHR 124


>UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 Tax=Variovorax
           paradoxus S110 RepID=C5CLF2_VARPS
          Length = 130

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
            +  I   R+++         C  CG  IP  R +  P    C+ECQ   ER
Sbjct: 69  ELRDIEAARERLRTGEFGT--CIDCGVQIPLDRLEAMPASARCLECQQRHER 118


>UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2
           Tax=Gammaproteobacteria RepID=B8GMT5_THISH
          Length = 132

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           +     +I        +C  CG+ I   R   +P    C  CQA  E+
Sbjct: 77  VEAALLRIAGQSYG--ICTDCGDAIAYERLDAYPTAKRCARCQAQHEK 122


>UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 Tax=Moraxellaceae
           RepID=A5WFD1_PSYWF
          Length = 109

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           V  Q ++T +N    +I+        C  CG  I + R +  P  TLC+
Sbjct: 59  VEAQQSLTYVNNALSRIDNGTYG--ECTVCGEDIEDKRLEAVPYATLCM 105


>UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium
           Ellin514 RepID=B9XD69_9BACT
          Length = 184

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 10/75 (13%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+   +Q  +  I +  Q+I ++     +CE  G PI   R    
Sbjct: 77  MADAGTDTYDRDFALSMLSADQSAVYEIEQAIQRIESNTYG--ICEMTGKPIQSERLNAI 134

Query: 53  PGVTLCVECQAYQER 67
           P     VE +   ER
Sbjct: 135 PWTRFSVEAERELER 149


>UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BI57_9GAMM
          Length = 123

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 22  RIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
              ++I+        C  CG  I  +R +  P  + C+ CQ+  E + +
Sbjct: 74  AALKRIDEGDFG--FCLDCGEEIELSRLRACPTASRCIRCQSVLEAEVR 120


>UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepID=A3IED4_9BACI
          Length = 150

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 9/73 (12%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPV---------YLCEACGNPIPEARRKIFP 53
             AD A  +T+QLT   I+  R                     C  CG  IP  R +  P
Sbjct: 41  HPADNASDLTDQLTEMAIDEHRGDNAEEIKEALQAMADGTYGECTVCGKEIPIGRLEAMP 100

Query: 54  GVTLCVECQAYQE 66
               CVE    +E
Sbjct: 101 QALTCVEHAEKKE 113


>UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           vulgaris str. 'Miyazaki F' RepID=B8DQJ2_DESVM
          Length = 142

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 9/76 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIP---------VYLCEACGNPIPEARRKIF 52
           +DE + A  V+E      +     +                  +C+ACG+ IP  R    
Sbjct: 53  ADENEFASRVSELTLSMTLLDRAGRRIREIEGVLRAMDSRDYGVCDACGDDIPLPRLLAR 112

Query: 53  PGVTLCVECQAYQERQ 68
           P   LCV CQ  QE Q
Sbjct: 113 PTTRLCVHCQMEQETQ 128


>UniRef50_Q3Z6R5 DnaK suppressor protein, putative n=5 Tax=Dehalococcoides
           RepID=Q3Z6R5_DEHE1
          Length = 123

 Score = 47.2 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            A        +        K +     +  CE C  PI  AR +  P   LC++C++ 
Sbjct: 63  LAMEKKLLDQIAETEYALDKYDRGVYGL--CEMCKEPIDPARLEALPQARLCMQCKSK 118


>UniRef50_Q9ZBS4 Putative uncharacterized protein SCO6164 n=4 Tax=Streptomyces
           RepID=Q9ZBS4_STRCO
          Length = 108

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+   A     +  +  I+    ++         C  CG P+P  R +I P    CV CQ
Sbjct: 46  DQLMSAQKAAIERVLKEIDEAFARVEEGTYGA--CLGCGKPVPGERLEILPYTRYCVACQ 103

Query: 63  AY 64
             
Sbjct: 104 RR 105


>UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4
           Tax=Hydrogenothermaceae RepID=B2V8G8_SULSY
          Length = 118

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 13/69 (18%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +DE + A + T           E+  +  I +  QKI        +CE+CG  IP  R K
Sbjct: 40  ADEMERAEAETSRILTLRNLDRERKLLKRIEQTLQKIEYGVYG--ICESCGAEIPYERLK 97

Query: 51  IFPGVTLCV 59
           + P  +LC+
Sbjct: 98  VRPIASLCI 106


>UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 Tax=Exiguobacterium
           RepID=C4KZG3_EXISA
          Length = 183

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D+A +  ++  ++ +++    I         CE CG  I   R ++ P  TLC+E
Sbjct: 57  ERDQALNELDEEFLSDVDKALLAIQNGTYGK--CEVCGKDIELDRLEVIPEATLCIE 111


>UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X5B5_DESRD
          Length = 112

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
             +  + +  ++++A      LC  CG  I   R    P   +C+ C  
Sbjct: 64  HRLARLEQALKRLDADDPEYGLCVECGEEIALKRLLALPESEVCIHCAE 112


>UniRef50_C6NRK8 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus
          ATCC 51756 RepID=C6NRK8_9GAMM
          Length = 72

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 5/71 (7%)

Query: 7  EAYSVTEQLTMTGINRIRQ----KINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           A  + ++     + R+R     + +        C  CG P P  R         CV C 
Sbjct: 1  MAAELEQRYRELALARLRALPSEEPDEDANGNRFCLDCGEPTPADRVAAV-HAVRCVTCA 59

Query: 63 AYQERQRKHYA 73
            +ER  +  A
Sbjct: 60 TRRERLARQRA 70


>UniRef50_A1SCC2 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614
           RepID=A1SCC2_NOCSJ
          Length = 127

 Score = 46.1 bits (108), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D  + A+    +  +  +   R ++      V  C  C  PI   R +  P  T C++C 
Sbjct: 68  DPVEAAHRAAVEQIVDEVVTARHRLTVGLYGV--CTGCEEPIATERLEFRPWATTCIKCS 125

Query: 63  AY 64
             
Sbjct: 126 QR 127


>UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangium cellulosum 'So
           ce 56' RepID=A9G9K0_SORC5
          Length = 167

 Score = 45.7 bits (107), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 13/79 (16%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE DEA +                 +  I+R   K+      +  CE  G PI   R K+
Sbjct: 86  DEMDEANAEGATSLTSKLLERDVRVLAEIDRALAKMKEGSYGM--CEGTGEPIGYRRLKL 143

Query: 52  FPGVTLCVECQAYQERQRK 70
            P     V  Q   ER+ +
Sbjct: 144 RPWARYSVAYQEQIEREER 162


>UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobium
           RepID=Q1MI46_RHIL3
          Length = 107

 Score = 45.7 bits (107), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           DE            +  I+    ++N        C  C N I + R    P    C++C
Sbjct: 46  DEVLREMQAEGHNQIAAIDAAIGRLNDDTYGK--CVKCHNRIGKERLTAVPYTPFCIDC 102


>UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 Tax=Streptomyces
           RepID=C9NIY3_9ACTO
          Length = 131

 Score = 45.7 bits (107), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            +  +  ++R  +++         CE C  PIP  R ++ P  T CV C
Sbjct: 79  ARDHLAEVDRALERLERGDYGR--CERCREPIPPGRLEVRPAATTCVRC 125


>UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostridium
           RepID=Q182T9_CLOD6
          Length = 163

 Score = 45.7 bits (107), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           E+  +  I+    KI        +C+ C N I   R  I P  +LC +C   +
Sbjct: 76  EEGRLYQIDLALSKIENGTYG--ICDLCHNQIDLERLDILPDTSLCNDCAKKE 126


>UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1
           Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPY8_THISH
          Length = 114

 Score = 45.3 bits (106), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           A     +  +  ++   +++N       +C ACG  IPEAR KI P   LC  C + QE
Sbjct: 56  ALGNEARRELARVHEALKRMNEGEYG--ICAACGEAIPEARLKILPQARLCAACASRQE 112


>UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 Tax=Bacteroidetes
           RepID=C7PES3_CHIPD
          Length = 348

 Score = 45.3 bits (106), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 18  TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
             + +   +I        +C   G  I +AR +  P  TL +E +
Sbjct: 301 DHLEKALVRIENKTYG--ICRVTGKLIDKARLRAVPHATLSIEAK 343


>UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter keddieii DSM 10542
           RepID=D1BG79_SANKS
          Length = 129

 Score = 45.3 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           L +  ++    +I A       C  CG PI   R +  P   LC++C  
Sbjct: 79  LQLEEVDGALARIAAGTYGT--CTRCGRPISAGRLEARPSAPLCIDCAR 125


>UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 Tax=Chloroherpeton
           thalassium ATCC 35110 RepID=B3QWB1_CHLT3
          Length = 208

 Score = 45.3 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 10/63 (15%)

Query: 1   MSDEADEAYSVTEQLT--------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   E     ++          ++ I++  ++I        +C   G PIP+AR +  
Sbjct: 138 MADHGTETMDREQRFLFISRDEKYLSYIDKALERIKNKTYG--ICAISGKPIPKARLEAV 195

Query: 53  PGV 55
           P  
Sbjct: 196 PHT 198


>UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17
           RepID=A3JJC9_9ALTE
          Length = 111

 Score = 45.3 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           +A  V     +  I     +I+        C  CG PI   R ++ P    C+ C  
Sbjct: 57  QAGKVRADRQLRLIEAALLRIDNDEYG--DCRECGEPINPKRLEVDPTSLYCIHCAR 111


>UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus halophilus
           RepID=A1DZZ7_SPOHA
          Length = 227

 Score = 44.9 bits (105), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           E D A     +  ++ I     ++ A      +CE  G PIP  R + FP    
Sbjct: 60  EKDIALLGHLKEELSDIEYSLNQMKAGKYG--ICEKTGKPIPNERLEAFPTART 111


>UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3
           Tax=Anaeromyxobacter RepID=Q2IQL4_ANADE
          Length = 139

 Score = 44.9 bits (105), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +  +  I+   ++I         C ACG P+   R +  P    C+ C
Sbjct: 86  RRELAEIDAALERIQQGRYGT--CLACGGPMGLQRLRAIPEARYCIAC 131


>UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9B2U1_HERA2
          Length = 117

 Score = 44.9 bits (105), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 6/63 (9%)

Query: 2   SDEADE----AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           SD  +     A     Q  +  +     +I+       +C   G  IP  R ++ P   L
Sbjct: 53  SDIFEREKNFALIEDRQRLIGEVEAALDRIDHGTYG--ICLKTGKQIPIERLEVLPYAAL 110

Query: 58  CVE 60
            +E
Sbjct: 111 SIE 113


>UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 Tax=Citreicella sp.
           SE45 RepID=D0D572_9RHOB
          Length = 130

 Score = 44.9 bits (105), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 19  GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            I    ++++        C  CG  I EAR  I P   LC  C
Sbjct: 84  RIEAALRRMDEGEYG--YCLTCGEAISEARLDILPDAPLCAAC 124


>UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SL94_9BACT
          Length = 113

 Score = 44.9 bits (105), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +    E+    +++ +  +     +I      +  C  C   IPE R KI P  T+C++C
Sbjct: 51  AKSISESNLRNKRMRLQRLEAALLRIARGSFGL--CSVCEEDIPEKRLKIAPESTVCMDC 108

Query: 62  QAYQ 65
              Q
Sbjct: 109 MREQ 112


>UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 Tax=Rhodobacterales
           RepID=A1B0I3_PARDP
          Length = 106

 Score = 44.5 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           DE  +A     Q  +  I+   ++I++       C  CG+ I  AR  + P   LC  C
Sbjct: 46  DEVLQALGHAHQAELNRIDAALRRIDSGDYG--FCAGCGDVILPARLDLLPDTPLCAHC 102


>UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 Tax=Beutenbergia
           cavernae DSM 12333 RepID=C5C3L5_BEUC1
          Length = 111

 Score = 44.5 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           A   + +     ++    +I      V  CE CG PIP AR ++ P    CV C
Sbjct: 59  ALIASAEHEREELDAALARIEDGTHGV--CERCGRPIPAARLEVRPAARTCVGC 110


>UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD
          Length = 220

 Score = 44.1 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 13/68 (19%)

Query: 3   DEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  + E+                I +   ++        +CE  G  IP  R + 
Sbjct: 50  HPADTATDLYEREKDIALYEQMSREYEEIKQALDRMENGTYG--ICERTGEQIPYERLEA 107

Query: 52  FPGVTLCV 59
            P     V
Sbjct: 108 NPTARTTV 115


>UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1 Tax=Syntrophomonas
           wolfei subsp. wolfei str. Goettingen RepID=Q0AYC5_SYNWW
          Length = 147

 Score = 44.1 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 13/76 (17%)

Query: 3   DEADEAYSVTEQLTMTGI-----------NRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  VT++ T  GI           N    ++      V  CEACG  I  AR + 
Sbjct: 42  HPADIASEVTQRETNLGILEMLEYELEKVNDALSRLQNGQYGV--CEACGQKIEPARLER 99

Query: 52  FPGVTLCVECQAYQER 67
               TLC  C   Q++
Sbjct: 100 LVNTTLCTNCARSQQK 115


>UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WFI4_BACSK
          Length = 207

 Score = 44.1 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 9/67 (13%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGI---------PVYLCEACGNPIPEARRKIFP 53
             AD A  + E+     ++   +                   +CE  G  IP  R + +P
Sbjct: 41  HPADTATDLFEREKDQAVHNHIKDELHEVEHALEKFNDGSYGICEKTGKAIPYERLEAYP 100

Query: 54  GVTLCVE 60
                VE
Sbjct: 101 AARTVVE 107


>UniRef50_Q1QXM4 Transcriptional regulators, TraR/DksA family n=3
           Tax=Gammaproteobacteria RepID=Q1QXM4_CHRSD
          Length = 106

 Score = 43.7 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
                +  +  + R   +++        CE CG  I   R +  P  T C  C   
Sbjct: 53  LEDEARTELAQVERALARLDTGV--GDHCEICGGLIAPERLEALPYTTRCKACADR 106


>UniRef50_UPI00016C3E17 hypothetical protein GobsU_32959 n=1 Tax=Gemmata obscuriglobus
          UQM 2246 RepID=UPI00016C3E17
          Length = 76

 Score = 43.7 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 37 CEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          C  CGN IP  R +  P   +CV C    
Sbjct: 7  CARCGNEIPAERLQALPETQVCVACSRAM 35


>UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella
           woodyi ATCC 51908 RepID=B1KG10_SHEWM
          Length = 115

 Score = 43.7 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 13/69 (18%)

Query: 3   DEADEAYS-----------VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D A              +++  ++ I R   ++      +  CE  G PI   R  +
Sbjct: 49  DAVDLASQIAAQRAAHSVLESQRQQLSEIERAMARLKVGTYGL--CEQTGEPIGFERLAV 106

Query: 52  FPGVTLCVE 60
            P     V 
Sbjct: 107 LPWARHTVT 115


>UniRef50_UPI0001C31ADF transcriptional regulator, TraR/DksA family n=1 Tax=Conexibacter
           woesei DSM 14684 RepID=UPI0001C31ADF
          Length = 115

 Score = 43.7 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E DE  +      +  I R  Q++        +    G PIP+AR +  P     V  QA
Sbjct: 52  ERDEGLAEQLHEQLAAIARAEQRVADGTYGRSI--DSGEPIPDARLEAVPWAERTVAEQA 109

Query: 64  YQERQR 69
             ER R
Sbjct: 110 AYERGR 115


>UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LT72_DESBD
          Length = 110

 Score = 43.4 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + T+  + R   +++     V  C  CG  I   R  + P  TLCV+C  
Sbjct: 63  RRTLMRLERALDRVDDEHFGV--CAECGEDIAVGRLLVMPEATLCVDCAE 110


>UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax=Streptomyces
           viridochromogenes DSM 40736 RepID=UPI0001B515E7
          Length = 118

 Score = 43.4 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 2   SDEADE---AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
            DEA++   A   T +  +  I+    ++      V  C+ C   IP  R +I P    C
Sbjct: 53  PDEAEQLMSAQRDTIERVLKEIDAAFARVQDRSYGV--CQGCSTRIPVERLEILPYTRFC 110

Query: 59  VECQA 63
           V CQ 
Sbjct: 111 VPCQR 115


>UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobium etli CFN 42
           RepID=Q2K1F6_RHIEC
          Length = 106

 Score = 43.4 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+         +  +  I+   +++N        C  C +PI   R +  P    CV C 
Sbjct: 45  DQVLMEMRKEAREQIISIDAALERLNHGSFGR--CVRCLDPIDPGRLEAIPYTPYCVTCA 102

Query: 63  A 63
            
Sbjct: 103 R 103


>UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 Tax=Comamonadaceae
           RepID=A1WBE4_ACISJ
          Length = 150

 Score = 43.4 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 33  PVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
               C  CG P+  AR    P    C+ CQ+  E + 
Sbjct: 112 SYGECTDCGQPVGVARLLAQPAAARCIACQSKAEARG 148


>UniRef50_A3HVW0 DnaK suppressor protein, putative n=2 Tax=Bacteroidetes
           RepID=A3HVW0_9SPHI
          Length = 127

 Score = 43.4 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 17/65 (26%), Gaps = 6/65 (9%)

Query: 2   SDEADEAYSVTEQLTMTG----INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           +D  +                 +     +I      V  C   G  I + R K  P    
Sbjct: 61  ADTLERESQSQLAARQQKFIINLENALVRIKNGTYGV--CVDTGKLISKERLKAVPHTMH 118

Query: 58  CVECQ 62
            +E +
Sbjct: 119 SIEAK 123


>UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 Tax=Micrococcineae
           RepID=B8H9G6_ARTCA
          Length = 118

 Score = 43.4 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 17  MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           +  +     +I         C  CG PI E R +  P    C++
Sbjct: 70  LDQVEAALTRIADGTYGS--CAVCGRPIAEGRLEARPWTPYCID 111


>UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Saccharopolyspora
          erythraea NRRL 2338 RepID=A4FJQ8_SACEN
          Length = 56

 Score = 43.4 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
               +  +  I     ++      +  C ACG+ IP       P  TLC+ CQ 
Sbjct: 1  MMRGARRALADIEVALARMRDGMYGL--CRACGSDIPLQLLTAIPKTTLCLSCQR 53


>UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
           RepID=C9YVQ5_STRSW
          Length = 132

 Score = 43.4 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
              T +  +  I+    ++  H      C  C  PIP  R +I P    CV C+ 
Sbjct: 77  QRDTIERVLKEIDAAFVRVQEHTYGT--CLGCSKPIPVERLEILPYTRFCVPCRR 129


>UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax=Proteobacteria
           RepID=Q1NSE5_9DELT
          Length = 116

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
             +A S      +  I    ++I +       C  C + I + R +  P V  C++C   
Sbjct: 55  MSQAASRLTSQELQRIQAAFKRIESGDYG--YCVVCQDEISQGRLRFDPSVLTCIDCARN 112

Query: 65  QERQ 68
            E +
Sbjct: 113 AETK 116


>UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes RepID=D0JAK5_BLASB
          Length = 131

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 8/67 (11%)

Query: 10  SVTEQLTM------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
               Q+          +N    ++        +C      IP+ R    P  TL +E + 
Sbjct: 67  EQNAQILEHLQKFINSLNAALIRVENKDYG--ICRITKKLIPKGRLMAVPHTTLSIEGKK 124

Query: 64  YQERQRK 70
             E++ K
Sbjct: 125 LVEKRNK 131


>UniRef50_A4XRJ7 Transcriptional regulator, TraR/DksA family n=8
           Tax=Pseudomonadaceae RepID=A4XRJ7_PSEMY
          Length = 103

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D A++A                +L +  +N+   ++      +  C  CG PI EAR  
Sbjct: 31  PDFAEQAQQRQNDEVLEALLAEAELGLALVNQALARVADGSYGL--CLKCGEPISEARLN 88

Query: 51  IFPGVTLCVECQAYQ 65
             P    C+ C + +
Sbjct: 89  AIPAAEYCLGCASVR 103


>UniRef50_A1SED9 Putative DnaK suppressor protein n=1 Tax=Nocardioides sp. JS614
          RepID=A1SED9_NOCSJ
          Length = 92

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          D          + T+  I+  R +++        C  CG  IP  R +  P    CV C
Sbjct: 33 DPVVAVQRGALKQTIAEIDAARGRLSDGTFGT--CTGCGGAIPADRLEFRPWAGTCVSC 89


>UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=Oceanobacillus
           iheyensis RepID=Q8ENZ4_OCEIH
          Length = 116

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 20/66 (30%), Gaps = 13/66 (19%)

Query: 3   DEADEAYSVTEQLTMT-----------GINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD      EQ                I    QKI      +   E  G PIPE R ++
Sbjct: 43  HPADMGTEQFEQQRDAGLNLMRENQLKEIEDALQKIEDGTYGIS--EKSGEPIPEERLEV 100

Query: 52  FPGVTL 57
            P   L
Sbjct: 101 LPTARL 106


>UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. GAI101
           RepID=B7RRT7_9RHOB
          Length = 107

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           DE  E+  +  Q  +  +NR   +I        +C+ CG+ I + R +      LC  C
Sbjct: 47  DEVLESLGLAAQKEIMLLNRAITRIENGSYG--ICKKCGDQISKERLEAVLYTQLCKRC 103


>UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Psychromonas ingrahamii 37 RepID=A1SZ57_PSYIN
          Length = 115

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           + +  +++        +C  C   I   R +I P    C++C    
Sbjct: 70  VEQALKRLEKQIYG--ICVDCDEDINVHRLEIDPTAIRCIKCAQVL 113


>UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales RepID=A3X4N5_9RHOB
          Length = 104

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E   + E   +  I+    ++         C+ CG+ I   R  + P    C  C 
Sbjct: 46  DEVLETLGLNELEEVRQIDAALARLVEGSYG--YCQICGDEIAAKRLDLVPATPFCSGCA 103

Query: 63  A 63
           +
Sbjct: 104 S 104


>UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesiocystis pacifica
           SIR-1 RepID=A6FXL2_9DELT
          Length = 132

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 13/78 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A               ++  +  +     ++        +CE    PIP  R ++
Sbjct: 44  DVEDQAAEEAGRFQAKQLLTRDRARLAEVEAALSRVAEGEYG--ICEESDEPIPFRRLEL 101

Query: 52  FPGVTLCVECQAYQERQR 69
            P     V  Q   E + 
Sbjct: 102 EPTTRYTVAAQEALEAEG 119


>UniRef50_A7HD49 Transcriptional regulator, TraR/DksA family n=1
          Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HD49_ANADF
          Length = 102

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 10 SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          S   +  +  I+    +I         C  CG P+   R +  P    C+ C
Sbjct: 45 SELARRELADIDDALLRIQEGCYG--CCLNCGGPLGLQRLRAIPEARYCLAC 94


>UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 Tax=Nakamurella
           multipartita DSM 44233 RepID=C8XJQ6_NAKMY
          Length = 117

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
                Q  +  ++     ++A      +CE CG  I   R    P  T CV C   +
Sbjct: 63  MHRAAQQRVRDVDEALAALDAGRYG--ICERCGCAIAAGRLAALPTATRCVSCAGRR 117


>UniRef50_D1VL44 Transcriptional regulator, TraR/DksA family n=3 Tax=Actinomycetales
           RepID=D1VL44_9ACTO
          Length = 118

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A        +  I+    ++ A       CE CG PI   R    P V  C+ C +   
Sbjct: 59  RATLREATTRLAEIDAALARLAAGRFGS--CETCGGPIEPGRLDARPWVRSCIGCASRPG 116

Query: 67  RQ 68
           R+
Sbjct: 117 RR 118


>UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepID=Q3J1J5_RHOS4
          Length = 105

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           Q  +  I     +I+A       C  CG  I EAR  + P    C +C
Sbjct: 58  QQEIRAITAALARIDADEYG--FCVKCGAEIGEARLDVLPYTPFCRKC 103


>UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q8R9_SULNB
          Length = 114

 Score = 41.8 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
                 M  +     KI+       +C+ C   IP  R K+ P    CV C
Sbjct: 60  EEATKRMNRLKHAYLKIDTPEYG--ICKECEEDIPIERLKLVPESLYCVAC 108


>UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gammaproteobacteria
           RepID=A4A689_9GAMM
          Length = 106

 Score = 41.8 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           DE  +A  V  +  +  +     ++      V  C  CG  I  AR +  P  T C+ C
Sbjct: 48  DEVVDAIGVETREAIVALKAALLRMEEGSYGV--CVECGGTIAAARLEARPEATHCINC 104


>UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 Tax=Shewanella
           RepID=A1RF16_SHESW
          Length = 110

 Score = 41.8 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + +   +  +Q  +  I     +IN+       C  CG  I   R    P VT C+ C
Sbjct: 54  QMELETARRKQHQLQVIEGALLRINSDEYGS--CFVCGEDIDLNRLMFDPTVTRCINC 109


>UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 Tax=Rhizobiaceae
           RepID=A6U730_SINMW
          Length = 114

 Score = 41.8 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 13/71 (18%)

Query: 2   SDEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D          +             I+    +I A      +C  CG+ I   R +
Sbjct: 37  ADVPDRVTERESDEVLEGLGLAGQGEIRAIDAALNRIEAGTFG--ICARCGDAISPERLR 94

Query: 51  IFPGVTLCVEC 61
             P   LC  C
Sbjct: 95  AVPHAPLCQTC 105


>UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium
           ochraceum DSM 14365 RepID=D0LJW3_HALO1
          Length = 142

 Score = 41.8 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQL-----------TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DE D+A     Q             +  + R  QK+      V  CE  G PI   R  
Sbjct: 63  PDEGDQASQNANQAYLLRYADKQNKQLQQVRRALQKLQTGEYGV--CEGSGEPIGVQRLM 120

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
           + P     VE +   +R+R+H 
Sbjct: 121 LRPWTRYSVEYKEQIDRERRHR 142


>UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata
           D2 RepID=A4CBE2_9GAMM
          Length = 103

 Score = 41.8 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
             +  +  +N+  + ++     V  C+ C   I  AR +  P    C++C
Sbjct: 55  EAKSELQLVNQAIENLHQGHYGV--CQQCLKAIAPARLEALPYTQTCIDC 102


>UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bacteroidetes
           RepID=Q11YT2_CYTH3
          Length = 259

 Score = 41.8 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           A++  +Q  +  +     +I        +C   G  IP+ R K+ P     +E +  +
Sbjct: 203 AFAARQQKFILQLENAYARIQNGTYG--ICIVTGKLIPKERLKLVPHTQHTIEAKEQR 258


>UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 Tax=Pelobacter
           propionicus DSM 2379 RepID=A1ATM0_PELPD
          Length = 145

 Score = 41.4 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A S             E+  +  I+    +I      +         IP  R K 
Sbjct: 46  DIYDQASSERDRELGLLLGDREREKLHAIDEALLRIREGEYGICEECE--EEIPLGRLKA 103

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P    CV C++  E+ +  
Sbjct: 104 LPFARHCVRCKSDLEKLQAQ 123


>UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=Rhizobium etli GR56
           RepID=UPI00019074B1
          Length = 128

 Score = 41.4 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+            +  I+   +++         C  C  PI  AR    P    C  C 
Sbjct: 62  DQVLMEMRREAGAQIQLIDAALERLKHGTFGR--CVTCLAPIETARLDAIPYTPYCATCA 119

Query: 63  AYQERQR 69
              + +R
Sbjct: 120 RLADERR 126


>UniRef50_B7QWI5 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11
           RepID=B7QWI5_9RHOB
          Length = 107

 Score = 41.4 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M+++        E      I++   +++A    V  C  CG+ I E      PG + C  
Sbjct: 49  MAEQDCLTQQWAELRRD--IDQALARVDAG--SVGYCNICGDRITEGHLAAHPGTSFCAA 104

Query: 61  C 61
           C
Sbjct: 105 C 105


>UniRef50_Q144T3 Transcriptional regulators, TraR/DksA family n=2 Tax=Burkholderia
           RepID=Q144T3_BURXL
          Length = 126

 Score = 41.4 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E  +A     +  +  I R  QKI      +   +  G PIP+AR +  P     VE Q+
Sbjct: 63  EVSQALRDVNEHRIADIQRALQKIEQGTYGLS--DESGLPIPKARLEATPEAIFTVEEQS 120

Query: 64  YQE 66
            +E
Sbjct: 121 RRE 123


>UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11 Tax=Chlorobiaceae
           RepID=B3ELW2_CHLPB
          Length = 147

 Score = 41.0 bits (95), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 10/63 (15%)

Query: 1   MSD----EADEAYSVTEQLTMTG----INRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      D                 I++  ++I      V  C   G PIP+ R +  
Sbjct: 74  MADHGTETMDREQRFMFIARDEKYLGYIDQALERIRNKTYGV--CAKSGKPIPKKRLEAV 131

Query: 53  PGV 55
           P  
Sbjct: 132 PHT 134


>UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 Tax=Rhodothermaceae
           RepID=D0MD16_RHOM4
          Length = 149

 Score = 41.0 bits (95), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 1   MSDEADEAYSVTEQLTMTG--------INRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   +A    +   M          ++R  ++I        +C+  G PIP  R +  
Sbjct: 78  MADAGTDAMEREKLFLMIARQQKYISHLDRALERIKNKTYG--ICKVTGKPIPRERLEAV 135

Query: 53  PGVTLCVECQ 62
           P   + +E +
Sbjct: 136 PHTEVSIEAK 145


>UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3
           Tax=Alphaproteobacteria RepID=Q2GBE3_NOVAD
          Length = 104

 Score = 40.7 bits (94), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
            ++  +  +  ++R  ++I A       C  CG  I  AR +  P   LC++C   +
Sbjct: 49  QALLLRRQIASVDRALERIAAGTYG--ECIRCGGEIAPARLEARPEAALCIDCARQE 103


>UniRef50_C6XZU8 DnaK suppressor protein n=4 Tax=Bacteroidetes RepID=C6XZU8_PEDHD
          Length = 126

 Score = 40.7 bits (94), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 11/67 (16%)

Query: 8   AYSVTEQLTMTG---------INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
           A    EQL             +     +I        +C   G  I + R +  P  TL 
Sbjct: 61  ATLEKEQLNQLAARQKKFIENLEAALVRIENKTYG--ICRETGKLIQKERLRAVPHATLS 118

Query: 59  VECQAYQ 65
           +E +  Q
Sbjct: 119 MEAKLKQ 125


>UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFB9_DESAH
          Length = 177

 Score = 40.7 bits (94), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M+ +  +     ++L    +    ++I+        C   GN I   R ++ P  TL VE
Sbjct: 66  MAMQLTKLNHYHKKLKQVML--ALERIDEGNFG--YCLLSGNRIGLNRLEVLPWATLAVE 121

Query: 61  CQAYQER 67
            Q   ER
Sbjct: 122 TQEMLER 128


>UniRef50_C1RJC9 DnaK suppressor protein n=4 Tax=Micrococcineae RepID=C1RJC9_9CELL
          Length = 113

 Score = 40.7 bits (94), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           A        +  I+    ++ A       C   G P+ +AR +  P  T CV
Sbjct: 61  ALGAAATRRLAEIDAALARVAAGTYGR--CAVGGEPLDDARLEARPTATTCV 110


>UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xanthus DK 1622
          RepID=Q1CWM4_MYXXD
          Length = 101

 Score = 40.7 bits (94), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 2/51 (3%)

Query: 11 VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            E   +  I     +I         C  CG  I   R +  P    C+ C
Sbjct: 48 QAEAQELRDIEEALTRIAHGEFGR--CARCGGAIGRHRLRAVPEARHCLTC 96


>UniRef50_B4D7F0 Transcriptional regulator, TraR/DksA family n=1
          Tax=Chthoniobacter flavus Ellin428 RepID=B4D7F0_9BACT
          Length = 72

 Score = 40.7 bits (94), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 31 GIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
             V  C  CG  IP+ R  + P   +CV C    
Sbjct: 2  NPEVKNCRICGAEIPKERLDVIPDTEVCVRCSKKI 36


>UniRef50_Q080Q5 Transcriptional regulators, TraR/DksA family protein n=1
           Tax=Shewanella frigidimarina NCIMB 400
           RepID=Q080Q5_SHEFN
          Length = 123

 Score = 40.3 bits (93), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 2/53 (3%)

Query: 19  GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            ++    ++      +  C  C   I   R    P    C  C+    R+ +H
Sbjct: 67  KLDAAYCQLELGLYGL--CSDCEMDIEPPRLFADPTEQRCTGCEQKFRREHRH 117


>UniRef50_A6Q6G5 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q6G5_SULNB
          Length = 115

 Score = 40.3 bits (93), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
             ++ +T +     +I+       +C  C   I   R  + P    CVEC
Sbjct: 61  ESKVRLTRLQNALLRIDKPMFG--ICIECEEEIGTGRMSVRPESVRCVEC 108


>UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50 Tax=Bacteroidetes
           RepID=A5FM28_FLAJ1
          Length = 126

 Score = 40.3 bits (93), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           MS EA+   ++ ++  +  +     ++        +C+  G  I + R KI P  T+ +E
Sbjct: 63  MSKEANSQLAIRQEKFIRDLKNALFRVENKTYG--ICKVTGKLISKERLKIVPHATMSIE 120

Query: 61  CQAYQ 65
            +  Q
Sbjct: 121 AKNLQ 125


>UniRef50_A0YAF5 DnaK suppressor protein n=1 Tax=marine gamma proteobacterium
           HTCC2143 RepID=A0YAF5_9GAMM
          Length = 106

 Score = 40.3 bits (93), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 16/47 (34%), Gaps = 2/47 (4%)

Query: 18  TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
             I    +KI+        C  CG  I   R K  P    CV C + 
Sbjct: 61  QEIRSALEKIDNKTYGK--CSNCGEAINPIRLKAIPETIHCVSCASK 105


>UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S312_9GAMM
          Length = 107

 Score = 40.3 bits (93), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           DE  +A     + ++  I     KI         CE CG  I   R +  P    C+ C
Sbjct: 49  DEVIDAIGNETRQSLHAIQVALDKIADGTYG--DCEKCGANIEAGRLQAIPESNCCMSC 105


>UniRef50_A2SLK3 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum
           PM1 RepID=A2SLK3_METPP
          Length = 131

 Score = 39.5 bits (91), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 2/42 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +     +          C  CG PI  AR    P  + C +C
Sbjct: 76  VRAALARFETGRYG--HCVECGAPIEPARLIERPQASRCDDC 115


>UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 Tax=Silicibacter
           lacuscaerulensis ITI-1157 RepID=D0CY54_9RHOB
          Length = 112

 Score = 39.5 bits (91), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A      L    +N    +I+        CE CG+ I   R ++ P    CV C +
Sbjct: 58  AQQTRRDLEARRLNAALTRISKGEFG--YCEDCGDAIARGRLELDPAAGKCVSCAS 111


>UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae CT 5369-93
          RepID=D0HX41_VIBCH
          Length = 79

 Score = 39.5 bits (91), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 2/38 (5%)

Query: 19 GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
           I +   KI         CE+CG  I   R +  P   
Sbjct: 4  KIEKTLDKIKEEDFG--YCESCGVEIGIRRLEAPPTAI 39


>UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12
          RepID=A8LJD1_DINSH
          Length = 92

 Score = 39.1 bits (90), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 13 EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          E   +  +    ++I      +  C ACG  I   R    P   LC  C+
Sbjct: 42 ELRQLRRLELALKRIETGAYGL--CMACGGEISPGRLHACPATALCASCK 89


>UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6QA93_SULNB
          Length = 116

 Score = 38.7 bits (89), Expect = 0.052,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 2/47 (4%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           ++  +        KI        +CE  G  IP  R +  P     V
Sbjct: 66  QEDELKETQHALTKIKNGTYG--ICEKTGKSIPVERLEANPIARYVV 110


>UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteria
           RepID=C3KFN9_PSEFL
          Length = 119

 Score = 38.7 bits (89), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            ++A     Q     + +  ++ +        C  CG  I   R    P   LC+ C + 
Sbjct: 58  MNDAIRGRAQHERVRLQQALKRWHKGEYG--WCNQCGALIALGRLVFDPATPLCITCASR 115

Query: 65  QE 66
            E
Sbjct: 116 VE 117


>UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S3A6_9GAMM
          Length = 112

 Score = 38.7 bits (89), Expect = 0.063,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 16/57 (28%), Gaps = 4/57 (7%)

Query: 7   EAYSVTEQLTMT--GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            A     +       I     ++         C  CG+ I   R    P  T C+ C
Sbjct: 55  MAQETARRRQQQLQKIKSALYRLEDGNYG--YCFTCGDAIDIGRLNFDPASTRCIGC 109


>UniRef50_UPI00016C3638 transcriptional regulators, TraR/DksA family protein n=1
           Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3638
          Length = 122

 Score = 38.4 bits (88), Expect = 0.069,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   +  ++E+  +        + +        C+ CG  +   R    P    C++C  
Sbjct: 57  EVARSVLLSEEQILGEAQAALARFDEGTFGR--CQRCGRAVARTRLATIPYARNCIKCAR 114

Query: 64  YQE 66
             E
Sbjct: 115 AAE 117


>UniRef50_A3YDJ1 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3YDJ1_9GAMM
          Length = 113

 Score = 38.4 bits (88), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
               E L +  +     ++      +  C+ C  PI E R  I P +  C +C
Sbjct: 61  CRKAENLALEAVQYAISRLQESDYGL--CKTCSKPIEEKRLTILPDIKHCFDC 111


>UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FAI8_DESAA
          Length = 112

 Score = 38.0 bits (87), Expect = 0.092,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 8/56 (14%)

Query: 17  MTGINRIRQKINA--------HGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
              +   + ++N                C  C   IP  R  + P   +CV+C   
Sbjct: 56  EKALANAKARMNGLLRALDNIGDPDFGYCAICDEEIPIGRIMLVPESDVCVKCAQK 111


>UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SL78_9BACT
          Length = 144

 Score = 38.0 bits (87), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
            T+ L +  + +  Q+I+A    V +       I E R +  P    C EC+   E++ 
Sbjct: 84  ETDALKLRLVEQALQRIDAGSYGVCIECE--EDIEEKRLEYVPFARYCTECKTELEKKG 140


>UniRef50_Q1ZD90 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3
           RepID=Q1ZD90_9GAMM
          Length = 129

 Score = 38.0 bits (87), Expect = 0.099,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 3/72 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           S + D      +  ++  I+     ++     +  C  C   I   R K       C  C
Sbjct: 58  SKDIDLKALKDKIKSLKKIDAALSNLHLGMFGL--CSDCEEEIELERLKEDATQQRCQHC 115

Query: 62  QAYQERQR-KHY 72
                +Q  K Y
Sbjct: 116 AEKYNKQHFKQY 127


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P41065 Protein traR n=37 Tax=root RepID=TRAR_ECOLI            80   2e-14
UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 ...    77   2e-13
UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiob...    77   2e-13
UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=5...    76   5e-13
UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilu...    75   6e-13
UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacter...    75   7e-13
UniRef50_Q3ZL39 Putative uncharacterized protein n=1 Tax=Escheri...    74   1e-12
UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 ...    74   1e-12
UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campy...    74   2e-12
UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 ...    74   2e-12
UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 ...    73   2e-12
UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammapro...    73   3e-12
UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyce...    73   3e-12
UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotom...    72   4e-12
UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carbo...    72   4e-12
UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 ...    72   5e-12
UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 ...    72   5e-12
UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=6...    72   7e-12
UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B...    72   7e-12
UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 ...    72   7e-12
UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 ...    71   9e-12
UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 ...    71   1e-11
UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7...    71   1e-11
UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB...    71   1e-11
UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5...    71   1e-11
UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1...    71   1e-11
UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 ...    71   1e-11
UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibr...    71   2e-11
UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 ...    71   2e-11
UniRef50_A1JNK3 Hypothetical 8.2 kDa protein in gpa 5'region (Co...    70   2e-11
UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1 ...    70   2e-11
UniRef50_P41059 Uncharacterized 8.5 kDa protein in gpA 5'region ...    70   3e-11
UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 ...    70   3e-11
UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobact...    70   3e-11
UniRef50_A2I309 Conjugative transfer protein n=1 Tax=Vibrio phag...    70   3e-11
UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253...    69   3e-11
UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 ...    69   3e-11
UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gr...    69   4e-11
UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68...    69   4e-11
UniRef50_UPI0001827371 putative prophage protein n=1 Tax=Enterob...    69   4e-11
UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomyc...    69   4e-11
UniRef50_C9XYU8 Uncharacterized 8.5 kDa protein in gpA 5'region ...    69   4e-11
UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Helioba...    69   4e-11
UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 ...    69   5e-11
UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 ...    69   5e-11
UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 ...    69   5e-11
UniRef50_C6MQY5 Transcriptional regulator, TraR/DksA family n=1 ...    69   5e-11
UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID...    69   5e-11
UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 ...    69   5e-11
UniRef50_D2BWU8 Transcriptional regulator, TraR/DksA family n=4 ...    69   5e-11
UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solana...    69   6e-11
UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=...    69   6e-11
UniRef50_B3QCL2 Transcriptional regulator, TraR/DksA family n=14...    69   6e-11
UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gamm...    69   6e-11
UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia Re...    69   7e-11
UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobact...    68   7e-11
UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 ...    68   7e-11
UniRef50_A3YA40 C4-type zinc finger protein, DksA/TraR family pr...    68   7e-11
UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 ...    68   8e-11
UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria R...    68   8e-11
UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 ...    68   9e-11
UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacte...    68   9e-11
UniRef50_Q65AH5 TraR protein n=4 Tax=Enterobacteriaceae RepID=Q6...    68   9e-11
UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacte...    68   9e-11
UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 ...    68   9e-11
UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 ...    68   9e-11
UniRef50_Q125W5 Transcriptional regulators, TraR/DksA family n=1...    68   9e-11
UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 ...    68   1e-10
UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillu...    68   1e-10
UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35...    68   1e-10
UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Term...    68   1e-10
UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3...    67   1e-10
UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 ...    67   1e-10
UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YT...    67   1e-10
UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovib...    67   1e-10
UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 ...    67   1e-10
UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID...    67   1e-10
UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candida...    67   1e-10
UniRef50_Q7N7S5 Similar to unknown protein n=1 Tax=Photorhabdus ...    67   2e-10
UniRef50_B8F4E6 DnaK suppressor protein/ C4-type zinc finger pro...    67   2e-10
UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 ...    67   2e-10
UniRef50_B5XPP1 Phage/conjugal plasmid C-4 type zinc finger prot...    67   2e-10
UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3...    67   2e-10
UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 ...    67   2e-10
UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1...    67   2e-10
UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopi...    67   2e-10
UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA fami...    67   2e-10
UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae ...    67   2e-10
UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastop...    66   3e-10
UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteo...    66   3e-10
UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10...    66   3e-10
UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14...    66   3e-10
UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1...    66   3e-10
UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 ...    66   3e-10
UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ...    66   3e-10
UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 ...    66   3e-10
UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 ...    66   3e-10
UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemm...    66   3e-10
UniRef50_B8FC44 Transcriptional regulator, TraR/DksA family n=2 ...    66   4e-10
UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Br...    66   4e-10
UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 ...    66   4e-10
UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria R...    66   4e-10
UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1...    66   4e-10
UniRef50_A1VE28 Transcriptional regulator, TraR/DksA family n=12...    66   5e-10
UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Ther...    66   5e-10
UniRef50_Q4QK09 DnaK suppressor protein, bacteriophage PSP3 gp34...    66   5e-10
UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subt...    66   5e-10
UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 ...    66   5e-10
UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificac...    66   5e-10
UniRef50_A4SL94 Phage protein n=2 Tax=root RepID=A4SL94_AERS4          66   5e-10
UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 ...    66   5e-10
UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11...    66   5e-10
UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostri...    66   6e-10
UniRef50_B4F0L8 Phage protein n=4 Tax=Enterobacteriaceae RepID=B...    65   6e-10
UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 ...    65   6e-10
UniRef50_A8GA41 Transcriptional regulator, TraR/DksA family n=1 ...    65   7e-10
UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria...    65   7e-10
UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter ...    65   7e-10
UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 ...    65   7e-10
UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 ...    65   7e-10
UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1...    65   7e-10
UniRef50_C0QW50 DNA-binding transcriptional regulator of transcr...    65   8e-10
UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family pro...    65   9e-10
UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 ...    65   9e-10
UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobac...    65   9e-10
UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 ...    64   1e-09
UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verruco...    64   1e-09
UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR famil...    64   1e-09
UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family prot...    64   1e-09
UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID...    64   1e-09
UniRef50_Q88IG2 C4-type zinc finger protein, DksA/TraR family n=...    64   1e-09
UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 ...    64   1e-09
UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 ...    64   1e-09
UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bil...    64   1e-09
UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmati...    64   1e-09
UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus su...    64   1e-09
UniRef50_Q4FUG7 Possible phage TraR/DksA family protein n=1 Tax=...    64   2e-09
UniRef50_B9Z318 Transcriptional regulator, TraR/DksA family n=2 ...    64   2e-09
UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera a...    64   2e-09
UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 ...    64   2e-09
UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 ...    64   2e-09
UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n...    64   2e-09
UniRef50_A9QS46 Putative conjugal transfer protein TraR n=1 Tax=...    64   2e-09
UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium...    64   2e-09
UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=...    64   2e-09
UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marin...    64   2e-09
UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter Rep...    64   2e-09
UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus ...    63   2e-09
UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppress...    63   2e-09
UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacte...    63   3e-09
UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family ...    63   3e-09
UniRef50_A6UZ55 Conserved domain protein n=2 Tax=Pseudomonas Rep...    63   3e-09
UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces lim...    63   3e-09
UniRef50_Q1AWF1 Transcriptional regulators, TraR/DksA family n=1...    63   3e-09
UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydroge...    63   3e-09
UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 ...    63   3e-09
UniRef50_C5B4E4 Putative uncharacterized protein n=1 Tax=Methylo...    63   3e-09
UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=...    63   3e-09
UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26...    63   4e-09
UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuens...    62   4e-09
UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 ...    62   4e-09
UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candi...    62   4e-09
UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 ...    62   4e-09
UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 ...    62   5e-09
UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 ...    62   5e-09
UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacte...    62   5e-09
UniRef50_A7N392 Putative uncharacterized protein n=1 Tax=Vibrio ...    62   5e-09
UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3...    62   5e-09
UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomyc...    62   5e-09
UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 ...    62   5e-09
UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1...    62   5e-09
UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 ...    62   6e-09
UniRef50_C4GGH6 Putative uncharacterized protein n=1 Tax=Kingell...    62   6e-09
UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9...    62   6e-09
UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1...    62   7e-09
UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 ...    62   8e-09
UniRef50_B5EUP2 Zinc finger protein n=32 Tax=Proteobacteria RepI...    62   8e-09
UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 ...    61   8e-09
UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbac...    61   9e-09
UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 ...    61   1e-08
UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 ...    61   1e-08
UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=1...    61   1e-08
UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10...    61   1e-08
UniRef50_A4JDG9 Transcriptional regulator, TraR/DksA family n=4 ...    61   1e-08
UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 ...    61   1e-08
UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus c...    61   1e-08
UniRef50_A4XQ42 Transcriptional regulator, TraR/DksA family n=11...    61   1e-08
UniRef50_Q2W8C2 Putative uncharacterized protein n=1 Tax=Magneto...    61   1e-08
UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 ...    61   2e-08
UniRef50_UPI0001AEFD73 hypothetical protein SghaA1_01734 n=1 Tax...    61   2e-08
UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 ...    61   2e-08
UniRef50_Q2LQQ9 Hypothetical cytosolic protein n=1 Tax=Syntrophu...    61   2e-08
UniRef50_B6ICF8 TraR protein n=1 Tax=Escherichia coli SE11 RepID...    61   2e-08
UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus ...    61   2e-08
UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 ...    60   2e-08
UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 ...    60   2e-08
UniRef50_UPI0001826470 hypothetical protein EcanA3_08019 n=1 Tax...    60   2e-08
UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 ...    60   2e-08
UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 ...    60   2e-08
UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=3...    60   2e-08
UniRef50_C4LBC7 Transcriptional regulator, TraR/DksA family n=1 ...    60   2e-08
UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=...    60   2e-08
UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4...    60   2e-08
UniRef50_P41039 Uncharacterized protein ybiI n=135 Tax=Proteobac...    60   2e-08
UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermom...    60   2e-08
UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Plancto...    60   3e-08
UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitroco...    60   3e-08
UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitroso...    60   3e-08
UniRef50_A9N2T0 Putative uncharacterized protein n=1 Tax=Salmone...    59   3e-08
UniRef50_B3B1J8 Conserved domain protein n=5 Tax=Gammaproteobact...    59   3e-08
UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacter...    59   4e-08
UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromono...    59   4e-08
UniRef50_A1F607 Conserved domain protein n=3 Tax=Vibrio cholerae...    59   4e-08
UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1...    59   4e-08
UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostrid...    59   4e-08
UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Hermini...    59   4e-08
UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 ...    59   5e-08
UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13...    59   5e-08
UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromon...    59   5e-08
UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 ...    59   6e-08
UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 ...    59   6e-08
UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax...    59   6e-08
UniRef50_A9ID32 Putative uncharacterized protein n=1 Tax=Bordete...    59   6e-08
UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA fam...    59   7e-08
UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbi...    58   7e-08
UniRef50_Q48285 Haemophilus somnus cryptic prophage genes, capsi...    58   7e-08
UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythro...    58   8e-08
UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR fa...    58   8e-08
UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangi...    58   8e-08
UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 ...    58   9e-08
UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2...    58   9e-08
UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1...    58   9e-08
UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID...    58   9e-08
UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family pro...    58   1e-07
UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 ...    58   1e-07
UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 ...    58   1e-07
UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 ...    58   1e-07
UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 ...    58   1e-07
UniRef50_A7ZJE9 Phage/conjugal plasmid C-4 type zinc finger prot...    58   1e-07
UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1...    58   1e-07
UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 ...    58   1e-07
UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1 ...    57   1e-07
UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 ...    57   1e-07
UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 ...    57   1e-07
UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD     57   1e-07
UniRef50_D0KGB6 Transcriptional regulator, TraR/DksA family n=1 ...    57   1e-07
UniRef50_Q8EDR9 C4-type zinc finger protein, DksA/TraR family n=...    57   1e-07
UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium teta...    57   1e-07
UniRef50_Q9ZBS4 Putative uncharacterized protein SCO6164 n=4 Tax...    57   2e-07
UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 ...    57   2e-07
UniRef50_Q9MC51 Orf77 n=1 Tax=Pseudomonas phage D3 RepID=Q9MC51_...    57   2e-07
UniRef50_C6BZJ9 Transcriptional regulator, TraR/DksA family n=1 ...    57   2e-07
UniRef50_B5TA71 Gp07 n=2 Tax=root RepID=B5TA71_9CAUD                   57   2e-07
UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptun...    57   2e-07
UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=...    57   2e-07
UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 ...    57   2e-07
UniRef50_D1U4E4 Transcriptional regulator, TraR/DksA family n=1 ...    57   2e-07
UniRef50_Q52PP5 Putative uncharacterized protein n=1 Tax=Xanthom...    57   2e-07
UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candida...    57   2e-07
UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwell...    56   3e-07
UniRef50_B7V4J8 Repressor, PtrB n=8 Tax=Pseudomonas RepID=B7V4J8...    56   3e-07
UniRef50_B0TKU6 Transcriptional regulator, TraR/DksA family n=1 ...    56   3e-07
UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 ...    56   3e-07
UniRef50_A4TVR6 DnaK suppressor protein n=3 Tax=Magnetospirillum...    56   3e-07
UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 ...    56   3e-07
UniRef50_UPI0001C31ADF transcriptional regulator, TraR/DksA fami...    56   3e-07
UniRef50_C9R760 Putative uncharacterized protein n=1 Tax=Aggrega...    56   4e-07
UniRef50_Q9ZXI6 Orf39 n=3 Tax=root RepID=Q9ZXI6_9CAUD                  56   4e-07
UniRef50_P44221 Uncharacterized protein HI1497 n=3 Tax=Haemophil...    56   4e-07
UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4 ...    56   4e-07
UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepI...    56   4e-07
UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    56   4e-07
UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family prot...    56   4e-07
UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 ...    56   4e-07
UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 ...    56   5e-07
UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 ...    56   5e-07
UniRef50_Q602X1 Putative uncharacterized protein n=1 Tax=Methylo...    56   5e-07
UniRef50_C5S4P2 Putative uncharacterized protein n=2 Tax=Pasteur...    56   5e-07
UniRef50_A4XZG1 Transcriptional regulator, TraR/DksA family n=1 ...    56   5e-07
UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 ...    56   5e-07
UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3 ...    56   6e-07
UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2 ...    56   6e-07
UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 ...    56   6e-07
UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobi...    56   6e-07
UniRef50_A1B365 Transcriptional regulator, TraR/DksA family n=35...    56   6e-07
UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 ...    55   6e-07
UniRef50_Q0EWC9 Putative uncharacterized protein n=1 Tax=Maripro...    55   6e-07
UniRef50_B6YQN7 DnaK suppressor protein n=1 Tax=Candidatus Azoba...    55   6e-07
UniRef50_B2I3M6 Putative uncharacterized protein n=3 Tax=Acineto...    55   7e-07
UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 ...    55   7e-07
UniRef50_Q8H9Q7 ORF8 n=1 Tax=Vibrio phage VHML RepID=Q8H9Q7_9CAUD      55   7e-07
UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 ...    55   7e-07
UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 ...    55   8e-07
UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 ...    55   8e-07
UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 ...    55   9e-07
UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinom...    55   9e-07
UniRef50_A4NCL4 Putative uncharacterized protein n=1 Tax=Haemoph...    55   1e-06
UniRef50_Q1VTU7 General stress protein, DnaK suppressor DskA n=1...    55   1e-06
UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillu...    54   1e-06
UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinob...    54   1e-06
UniRef50_UPI000190AE5D hypothetical protein Salmoneentericaenter...    54   1e-06
UniRef50_Q3Z6R5 DnaK suppressor protein, putative n=5 Tax=Dehalo...    54   1e-06
UniRef50_B0V602 Putative uncharacterized protein n=1 Tax=Acineto...    54   1e-06
UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinel...    54   1e-06
UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus hal...    54   1e-06
UniRef50_C8N773 TraR/DksA family transcriptional regulator n=1 T...    54   1e-06
UniRef50_A5EYQ4 DksA-like zinc finger domain containing protein ...    54   1e-06
UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 ...    54   2e-06
UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 ...    54   2e-06
UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 ...    54   2e-06
UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 ...    54   2e-06
UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 ...    54   2e-06
UniRef50_B7J8S5 Putative uncharacterized protein n=1 Tax=Acidith...    54   2e-06
UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 ...    54   2e-06
UniRef50_B7WXU2 Transcriptional regulator, TraR/DksA family n=1 ...    54   2e-06
UniRef50_A8R990 Putative uncharacterized protein n=2 Tax=unclass...    53   2e-06
UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter ked...    53   2e-06
UniRef50_C4WG44 Transcriptional regulator, TraR/DksA family n=1 ...    53   2e-06
UniRef50_B6EIS7 Probable rRNA transcription initiatior protein,p...    53   3e-06
UniRef50_A1SCC2 Putative uncharacterized protein n=1 Tax=Nocardi...    53   3e-06
UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1...    53   3e-06
UniRef50_A3EVE8 Putative uncharacterized protein n=1 Tax=Leptosp...    53   3e-06
UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax...    53   3e-06
UniRef50_Q06424 Uncharacterized 8.2 kDa protein in gpA 5'region ...    52   5e-06
UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 ...    52   5e-06
UniRef50_B0ZSI9 Putative uncharacterized protein n=1 Tax=Halomon...    52   5e-06
UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 ...    52   6e-06
UniRef50_Q2WA51 DnaK suppressor protein n=1 Tax=Magnetospirillum...    52   6e-06
UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 ...    52   6e-06
UniRef50_B9JYG7 DnaK suppressor protein n=2 Tax=Agrobacterium vi...    51   1e-05
UniRef50_B8J2D3 Transcriptional regulator, TraR/DksA family n=1 ...    50   2e-05
UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 ...    50   2e-05
UniRef50_Q1GXR9 Transcriptional regulators, TraR/DksA family n=1...    50   3e-05
UniRef50_C6NRK8 Putative uncharacterized protein n=1 Tax=Acidith...    50   3e-05
UniRef50_Q1QXM4 Transcriptional regulators, TraR/DksA family n=3...    49   4e-05
UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio ac...    49   5e-05
UniRef50_Q6U9H2 Putative uncharacterized protein n=2 Tax=unclass...    49   6e-05
UniRef50_Q2SPX6 DnaK suppressor protein n=1 Tax=Hahella chejuens...    47   1e-04
UniRef50_Q0HYS5 Transcriptional regulators, TraR/DksA family n=3...    47   1e-04
UniRef50_UPI00016C3E17 hypothetical protein GobsU_32959 n=1 Tax=...    44   0.002

Sequences not found previously or not previously below threshold:

UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bactero...    56   5e-07
UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesio...    54   2e-06
UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobi...    54   2e-06
UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=...    53   3e-06
UniRef50_A1SED9 Putative DnaK suppressor protein n=1 Tax=Nocardi...    53   3e-06
UniRef50_A3HVW0 DnaK suppressor protein, putative n=2 Tax=Bacter...    53   3e-06
UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 ...    53   3e-06
UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11...    53   3e-06
UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 ...    52   4e-06
UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 ...    52   5e-06
UniRef50_Q144T3 Transcriptional regulators, TraR/DksA family n=2...    52   7e-06
UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=...    52   8e-06
UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. ...    51   1e-05
UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales ...    51   1e-05
UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes R...    51   1e-05
UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50...    50   2e-05
UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Strepto...    50   2e-05
UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM...    50   2e-05
UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfuro...    50   2e-05
UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 ...    50   2e-05
UniRef50_A7HD49 Transcriptional regulator, TraR/DksA family n=1 ...    50   3e-05
UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 ...    50   3e-05
UniRef50_A0YAF5 DnaK suppressor protein n=1 Tax=marine gamma pro...    49   3e-05
UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family prot...    49   4e-05
UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1 ...    49   4e-05
UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoa...    49   4e-05
UniRef50_B1FBH2 Transcriptional regulator, TraR/DksA family n=1 ...    49   4e-05
UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 ...    49   4e-05
UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax...    49   5e-05
UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gam...    49   5e-05
UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax...    49   6e-05
UniRef50_C6XZU8 DnaK suppressor protein n=4 Tax=Bacteroidetes Re...    49   6e-05
UniRef50_A4XRJ7 Transcriptional regulator, TraR/DksA family n=8 ...    49   7e-05
UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3 ...    48   7e-05
UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Sacchar...    48   8e-05
UniRef50_D1VL44 Transcriptional regulator, TraR/DksA family n=3 ...    48   8e-05
UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ...    48   9e-05
UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 ...    48   1e-04
UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepI...    48   1e-04
UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine ...    47   1e-04
UniRef50_C9MPK9 Putative DnaK suppressor protein n=2 Tax=Prevote...    47   1e-04
UniRef50_C1RJC9 DnaK suppressor protein n=4 Tax=Micrococcineae R...    47   2e-04
UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xant...    47   2e-04
UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio ac...    47   2e-04
UniRef50_Q8CJP0 Putative uncharacterized protein SCO6165 n=3 Tax...    46   5e-04
UniRef50_Q45478 Uncharacterized protein ylyA n=7 Tax=Bacillus Re...    45   6e-04
UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine ...    45   6e-04
UniRef50_A6W860 Transcriptional regulator, TraR/DksA family n=1 ...    45   6e-04
UniRef50_Q020R1 Serine phosphatase n=1 Tax=Candidatus Solibacter...    45   7e-04
UniRef50_A2SLK3 Putative uncharacterized protein n=1 Tax=Methyli...    45   7e-04
UniRef50_UPI00016C3638 transcriptional regulators, TraR/DksA fam...    45   8e-04
UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacte...    45   8e-04
UniRef50_A6Q6G5 Putative uncharacterized protein n=1 Tax=Sulfuro...    45   8e-04
UniRef50_Q2IF94 Transcriptional regulator, TraR/DksA family n=4 ...    45   0.001
UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 ...    45   0.001
UniRef50_B9JTX5 DnaK suppressor protein n=1 Tax=Agrobacterium vi...    45   0.001
UniRef50_Q1MZF4 DnaK suppressor protein n=1 Tax=Bermanella maris...    44   0.001
UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellov...    44   0.001
UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteri...    44   0.001
UniRef50_A0LA91 Transcriptional regulator, TraR/DksA family n=5 ...    44   0.001
UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 ...    44   0.001
UniRef50_UPI0001AEEFB7 hypothetical protein SghaA1_04058 n=2 Tax...    44   0.002
UniRef50_Q1ZD90 Putative uncharacterized protein n=1 Tax=Psychro...    44   0.002
UniRef50_B7QWI5 Putative uncharacterized protein n=1 Tax=Ruegeri...    44   0.002
UniRef50_A8LRU0 Putative uncharacterized protein n=3 Tax=Rhodoba...    44   0.002
UniRef50_A4C5Q6 Putative DksA-type zinc finger protein n=1 Tax=P...    44   0.002
UniRef50_Q0ALK2 Transcriptional regulators, TraR/DksA family n=1...    43   0.003
UniRef50_A9EK28 Putative uncharacterized protein n=2 Tax=Phaeoba...    43   0.003
UniRef50_Q1IQ14 Serine phosphatase n=1 Tax=Candidatus Koribacter...    43   0.003
UniRef50_Q080Q5 Transcriptional regulators, TraR/DksA family pro...    43   0.003
UniRef50_A9DDI2 DnaK suppressor protein, putative n=2 Tax=Rhizob...    43   0.003
UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae ...    43   0.004
UniRef50_C9YVQ6 Putative uncharacterized protein n=2 Tax=Strepto...    42   0.006
UniRef50_A3YDJ1 Putative uncharacterized protein n=1 Tax=Marinom...    42   0.007
UniRef50_C1AE46 Putative uncharacterized protein n=1 Tax=Gemmati...    41   0.009
UniRef50_B6BP36 Transcriptional regulator, TraR/DksA family n=1 ...    41   0.013
UniRef50_D2B0C4 Transcriptional regulator, TraR/DksA family n=1 ...    41   0.014
UniRef50_A7Z4G4 YlyA n=1 Tax=Bacillus amyloliquefaciens FZB42 Re...    41   0.014
UniRef50_B4D7F0 Transcriptional regulator, TraR/DksA family n=1 ...    40   0.016
UniRef50_Q12LK7 Putative uncharacterized protein n=1 Tax=Shewane...    40   0.016
UniRef50_A1SW83 DnaK suppressor n=1 Tax=Psychromonas ingrahamii ...    40   0.018
UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseu...    40   0.018
UniRef50_Q0HHY4 Transcriptional regulators, TraR/DksA family n=1...    40   0.019
UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1 ...    40   0.020
UniRef50_UPI0000D553E9 prokaryotic dksA/traR C4-type zinc finger...    40   0.022
UniRef50_C7MER6 DnaK suppressor protein n=1 Tax=Brachybacterium ...    40   0.025
UniRef50_A6WN37 Zinc finger-related protein n=4 Tax=Shewanella R...    40   0.028
UniRef50_Q88BV3 DnaK suppressor domain protein n=1 Tax=Pseudomon...    40   0.030
UniRef50_Q2N719 DnaK suppressor protein, putative n=9 Tax=Alphap...    40   0.030
UniRef50_Q1GF41 Transcriptional regulators TraR/DksA family n=2 ...    39   0.048
UniRef50_A1SEE1 Putative uncharacterized protein n=1 Tax=Nocardi...    39   0.057
UniRef50_B8CMX6 DksA-type zinc finger protein n=8 Tax=Shewanella...    39   0.061
UniRef50_A4A0C8 Putative uncharacterized protein n=1 Tax=Blastop...    39   0.071

>UniRef50_P41065 Protein traR n=37 Tax=root RepID=TRAR_ECOLI
          Length = 73

 Score = 79.8 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE
Sbjct: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60

Query: 61 CQAYQERQRKHYA 73
          CQAYQERQRKHYA
Sbjct: 61 CQAYQERQRKHYA 73


>UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 Tax=Verrucomicrobia
           RepID=B4D0A5_9BACT
          Length = 233

 Score = 77.1 bits (189), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 4   EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+   EQ  +  I    ++I      V  CE  G PI   R +  P     VEC
Sbjct: 134 DRDFALSLLSQEQDALYEIEEALKRIELGTYGV--CEMSGKPIAHPRLEALPFARYTVEC 191

Query: 62  QAYQERQRK 70
           Q+  E+Q K
Sbjct: 192 QSQIEKQGK 200


>UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67Q17_SYMTH
          Length = 269

 Score = 76.7 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D          +  I    Q+++       +CE CG PI   R K FP  T C+ CQ  +
Sbjct: 60  DLGLRSHMLRRIQEIESALQRMDQGTYG--ICEECGRPIDPERLKAFPSATTCITCQQRR 117

Query: 66  ERQRKHY 72
           E +   +
Sbjct: 118 EARPDRF 124


>UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=58
           Tax=Betaproteobacteria RepID=Q21SV6_RHOFD
          Length = 429

 Score = 75.5 bits (185), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  +  I +   +I++       C+  G  I   R  
Sbjct: 348 PDPADRATIEEEHALELRTRDRERKLLKKIEQSLARIDSGDYG--YCDETGEAIGVGRLL 405

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   L +E Q  +E ++K +
Sbjct: 406 ARPTANLSLEAQQRRELKQKMF 427


>UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilum infernorum V4
           RepID=B3DUR8_METI4
          Length = 249

 Score = 75.1 bits (184), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 4   EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+   E  ++  I+   ++I  +     +C+ CG PIP  R +  P     V+C
Sbjct: 147 DRDFALSLLSQENDSLIEIDDSLKRIEDNTYG--ICQMCGKPIPIIRLQAIPYARFTVDC 204

Query: 62  QAYQERQRKHY 72
           Q   E+  K Y
Sbjct: 205 QRQLEK-EKMY 214


>UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacteria
           RepID=A6T2Z9_JANMA
          Length = 310

 Score = 75.1 bits (184), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQK-----------INAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +K           I++       CE  G PI   R  
Sbjct: 229 PDPADRATIEEEHALELRTRDRERKLLKKVQQSLLSIDSGEYG--WCEETGEPIGVPRLL 286

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q  +E ++K Y
Sbjct: 287 ARPTATLSLEAQQRRELKQKLY 308


>UniRef50_Q3ZL39 Putative uncharacterized protein n=1 Tax=Escherichia blattae
          RepID=Q3ZL39_ESCBL
          Length = 76

 Score = 74.4 bits (182), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+   D A  +  +     +N+  +++         C  C  PIP AR +  P    CV 
Sbjct: 1  MTKAFDRASDLEMEERERLLNKHLRRVKELPESYGFCNDCEQPIPAARLQALPDAVTCVT 60

Query: 61 CQAYQERQRKH 71
          CQA +E +RKH
Sbjct: 61 CQAIREHRRKH 71


>UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 Tax=Ammonifex
           degensii KC4 RepID=C9R7U4_AMMDK
          Length = 176

 Score = 74.0 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  I    +++         CE+CG PIP  R +  P  TLC  C+  Q
Sbjct: 39  DLALREDALLKLQVIEDALRRLEEGTYG--YCESCGAPIPRERLEAVPYTTLCHACKERQ 96

Query: 66  ERQRKHY 72
           E +    
Sbjct: 97  EAKGVRR 103


>UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campylobacter
           RepID=A1VXK8_CAMJJ
          Length = 120

 Score = 74.0 bits (181), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A S   +  +  I     KI        +CE+C + I   R K+ P    C+ C+ 
Sbjct: 53  QIDFAISTNLKEELIEIEDSLDKIKNGTYG--ICESCDDEIDSQRLKVKPHARYCITCRQ 110

Query: 64  YQERQRKH 71
             E+ +KH
Sbjct: 111 IAEQGKKH 118


>UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7
           Tax=Cystobacterineae RepID=A7H9X1_ANADF
          Length = 120

 Score = 73.6 bits (180), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 1   MSDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           + DE D A S             E+  +  I++   +I        +CE C   I   R 
Sbjct: 39  LPDEIDLASSEYTQSMIFRLRDREKFLLAKIDKALARIENGTFG--ICERCEEEISVKRL 96

Query: 50  KIFPGVTLCVECQAYQERQRKHY 72
           +  P  TLC+ C+  QE++ K +
Sbjct: 97  EARPVTTLCIRCKEEQEQKEKSF 119


>UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 Tax=Roseiflexus
           RepID=A5UPY9_ROSS1
          Length = 121

 Score = 73.2 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A     +  +  +N   ++++       +C  CG PIP  R +  P  TLCV CQ+
Sbjct: 56  ERDLALRSNARELLEQVNAALRRLDEGTYG--ICADCGEPIPIERLEALPYATLCVRCQS 113

Query: 64  YQERQRK 70
            +ER R+
Sbjct: 114 TRERARR 120


>UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammaproteobacteria
           RepID=DKSA_BUCBP
          Length = 151

 Score = 72.8 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I +  +K+         CE+CG  I   R +
Sbjct: 70  PDPIDRAVQEEEFSFELRHRDRERKLIEKIEKTLKKVENKDFG--YCESCGIEIGIKRLE 127

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+   E + K 
Sbjct: 128 ARPTANLCIDCKTLSEIREKQ 148


>UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyces
           RepID=Q9S2X6_STRCO
          Length = 239

 Score = 72.8 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A + T +  ++   R   +++A    +  CE CGNPI +AR + FP  TLCVEC+ 
Sbjct: 176 EHELALAATAREVLSQTERALDRLDAGTYGL--CENCGNPIGKARMQAFPRATLCVECKQ 233

Query: 64  YQERQ 68
            QER+
Sbjct: 234 KQERR 238


>UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D3H2_PELTS
          Length = 242

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  I+R   KI         C+ CG  IP  R +  P    C +C+  +
Sbjct: 68  DFALRENAMLAVAAIDRALAKIENGTYGK--CDNCGREIPLERLEAVPSTVCCKKCKEAE 125

Query: 66  ERQRK 70
           E+  +
Sbjct: 126 EKNTR 130


>UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carboxydothermus
           hydrogenoformans Z-2901 RepID=Q3ABZ5_CARHZ
          Length = 213

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     +L +  I+     IN     +  C  CG  IP  R    P    CV CQ   
Sbjct: 59  DFALIDNLKLKLRQIDEAIALINQGKYGL--CIDCGQKIPVDRLFANPVAIRCVACQKRV 116

Query: 66  ERQ 68
           E +
Sbjct: 117 EER 119


>UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfotomaculum reducens MI-1 RepID=A4J571_DESRM
          Length = 234

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A       T+  I+    K+        +CE C   I + R +  P  T C++C++  
Sbjct: 64  DFALREDAITTLGAIDDALDKMEEGMYG--ICEVCHQEISQDRLEAIPYTTQCIDCKSRD 121

Query: 66  ERQRKHY 72
           E   K +
Sbjct: 122 EHLPKSH 128


>UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula
           staleyi DSM 6068 RepID=D2R2J7_9PLAN
          Length = 148

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE +   +  E   +  I+   +++ +       CE C  PIP  R +  P   +C++CQ
Sbjct: 53  DEINSQLAEVESRELAHIDTALERMRSGNYGA--CEGCNEPIPLLRLQALPYAVMCIKCQ 110

Query: 63  AYQERQR 69
              E+  
Sbjct: 111 REAEKNG 117


>UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=65
           Tax=Betaproteobacteria RepID=Q12EM6_POLSJ
          Length = 450

 Score = 71.7 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  +  I +   +I++       C+  G PI   R  
Sbjct: 369 PDPADRATIEEEHALELRTRDRERKLLKKIEQSIARIDSGDYG--YCDETGEPIGVGRLI 426

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   L +E Q  +E ++K +
Sbjct: 427 ARPTANLSLEAQQRRELKQKMF 448


>UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B6BSH6_9RICK
          Length = 180

 Score = 71.7 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTEQL-----------TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D+A S T++             ++ I++   +I         C     PI   R  
Sbjct: 98  ADIVDQASSYTDKNVEMKAINRQIKLISEIDKALARIREDIYG--YCLDTAEPIGLKRLM 155

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P     +  Q   E+  K +A
Sbjct: 156 ARPVAKYTIAAQEKHEKDEKVHA 178


>UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Halothermothrix
           orenii H 168 RepID=B8CWL7_HALOH
          Length = 228

 Score = 71.7 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D       Q+ +  +     ++      +  CE CG  I E R +  P  TLC  CQA
Sbjct: 60  EKDRGLRDNAQVLLNKVENALNRLEEGNYGL--CEKCGQEIREERLETIPYATLCERCQA 117

Query: 64  YQERQRKHY 72
            +E +  + 
Sbjct: 118 KEEGKDYNR 126


>UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LWG8_BACS4
          Length = 242

 Score = 71.3 bits (174), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A +   +  +  I+   + I         CE CG  IP  R +  P    C+  Q 
Sbjct: 62  EKDIALNEHSEQLLDEIDNALKAIEEGSYGK--CEVCGTDIPYERLEAIPNARRCI--QH 117

Query: 64  YQER 67
            +E+
Sbjct: 118 AEEK 121


>UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium
           Ellin514 RepID=B9XR79_9BACT
          Length = 192

 Score = 71.3 bits (174), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 10/80 (12%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  ++Q  +  I    ++I  +   V  CE  G PIP+AR +  
Sbjct: 82  MADSGTDNFDRDFALSLLSSDQDAIYEIEEALKRIEKNTYGV--CELTGKPIPKARLEAI 139

Query: 53  PGVTLCVECQAYQERQRKHY 72
           P     V+ QA  E++    
Sbjct: 140 PWTRFTVQAQAQLEKEGALR 159


>UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7
           Tax=Actinomycetales RepID=A0LTP3_ACIC1
          Length = 527

 Score = 71.3 bits (174), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +   +  +        +I         CE CGNPI + R +  P  TLCV C+ 
Sbjct: 465 EHEMSLANNARDLLVQTEHALARIADGTYGR--CENCGNPINKLRLQANPRATLCVSCKQ 522

Query: 64  YQERQ 68
            +ER+
Sbjct: 523 REERR 527


>UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB74
           RepID=B5GH83_9ACTO
          Length = 232

 Score = 71.3 bits (174), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A +   +  +    R   +++A    V  CE CG PI +AR + FP   LCV+C+ 
Sbjct: 170 EHELALAAGSRERLEQTERALLRMDAGTYGV--CENCGKPIGKARMQAFPHAILCVDCKQ 227

Query: 64  YQERQ 68
             ER+
Sbjct: 228 KSERR 232


>UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5 Tax=Clostridium
           RepID=A3DD29_CLOTH
          Length = 212

 Score = 70.9 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A  V E+  +  IN    K++        CE CG  I E R +  P   LC++C+ 
Sbjct: 61  ELNNALKVHEERLLEDINEALTKMDKGSFGK--CELCGKEIDEERLEALPYTRLCIDCEN 118

Query: 64  YQE 66
            +E
Sbjct: 119 AKE 121


>UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RK56_MOOTA
          Length = 251

 Score = 70.9 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     Q+ +  I    Q I         C  CG  IP  R +  P  TLC+EC+   
Sbjct: 63  DLALRDNVQVQLRKIEDALQSIAEGTYG--YCRRCGREIPRERLEAIPETTLCLECRRKM 120

Query: 66  ERQRKHYA 73
           E +   ++
Sbjct: 121 EGKADKHS 128


>UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 Tax=Clostridia
           RepID=A4XKS6_CALS8
          Length = 209

 Score = 70.5 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 13/78 (16%)

Query: 3   DEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  + E           +  +  I +   KI         C +C   IP  R   
Sbjct: 49  HPADIASDLFEVEKNMGLKADMKRKLELIEKALSKIEKGNFG--YCISCKKEIPFDRLLA 106

Query: 52  FPGVTLCVECQAYQERQR 69
            P    C+ECQ   E++ 
Sbjct: 107 IPYTEFCIECQKDMEKRE 124


>UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibrionales
           RepID=A7K6F3_VIBSE
          Length = 208

 Score = 70.5 bits (172), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I +   KI         CE+CG  I   R +
Sbjct: 67  PDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEDDFG--FCESCGVEIGVRRLE 124

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+   E + K 
Sbjct: 125 ARPTADLCIDCKTLAEIKEKQ 145


>UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 Tax=Dethiobacter
           alkaliphilus AHT 1 RepID=C0GJQ4_9FIRM
          Length = 203

 Score = 70.5 bits (172), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D +     Q+ +  +    +K++     +  CE CG PIPE R    P    CV+C+   
Sbjct: 62  DISLHEKNQMVLDKVEEALEKLDNDIYGM--CENCGKPIPEERLDALPYAEFCVQCKKKS 119

Query: 66  E 66
           E
Sbjct: 120 E 120


>UniRef50_A1JNK3 Hypothetical 8.2 kDa protein in gpa 5'region (Conserved
          hypothetical phage protein) n=1 Tax=Yersinia
          enterocolitica subsp. enterocolitica 8081
          RepID=A1JNK3_YERE8
          Length = 74

 Score = 70.1 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D A    E L    I + R K        ++C +C   IPE RR   PGV  CV 
Sbjct: 1  MPDLMDIAQERQEMLLAMQIAKARSKPI--TASAFICASCEAEIPEQRRITVPGVIFCVA 58

Query: 61 CQAYQERQRKHY 72
          CQ   E ++KHY
Sbjct: 59 CQQLHEEKKKHY 70


>UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfonatronospira thiodismutans ASO3-1
           RepID=C0GTL3_9DELT
          Length = 243

 Score = 69.8 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     +  +  I+    ++        +C++CG  I EAR +  P    C  C    E 
Sbjct: 57  ALDSQARSELNHIDHALDRMIIGNYG--ICDSCGQEISEARLQAVPWARYCRVCVNKAEE 114

Query: 68  Q 68
           +
Sbjct: 115 K 115


>UniRef50_P41059 Uncharacterized 8.5 kDa protein in gpA 5'region n=40 Tax=root
          RepID=CP80_BP186
          Length = 75

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A    ++     I+  R + +   +  ++CE C  PIPEARR+  PGV  CV 
Sbjct: 1  MADAMDLAQLREQEDRERHISNARSRRHE--VSAFICEECDAPIPEARRRAIPGVQCCVT 58

Query: 61 CQAYQERQRKHY 72
          CQ   E + KHY
Sbjct: 59 CQEILELKSKHY 70


>UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Desulforudis audaxviator MP104C RepID=B1I4J4_DESAP
          Length = 212

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     +  +  +     +++        C+ CG  I   R +  P  T C EC+A  
Sbjct: 67  DFALRENARFRLLAVEDALARMDRGTYGR--CDECGVDIDLERLEAVPFTTKCRECKARA 124

Query: 66  ERQRKH 71
           E + + 
Sbjct: 125 EGKDER 130


>UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobacteria
           RepID=Q1MS84_LAWIP
          Length = 133

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +           E+  +  I    Q+I+     V  CE CG+ I   R K
Sbjct: 52  ADPADRASAESDRAFTLRIRDRERRLIRKIQSALQRIDDGTYGV--CEDCGDDIGTPRLK 109

Query: 51  IFPGVTLCVECQAYQERQR 69
             P   LC+ C++ QE   
Sbjct: 110 ARPVTKLCINCKSRQEEGE 128


>UniRef50_A2I309 Conjugative transfer protein n=1 Tax=Vibrio phage VP882
          RepID=A2I309_9CAUD
          Length = 73

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSD AD+A  V EQ     +   +  IN        C+ C + IPEARR+  PGV LCV+
Sbjct: 1  MSDIADQAQDVIEQHLTASLANRKHNINPAIPSAKHCDDCESEIPEARRRSLPGVRLCVD 60

Query: 61 CQAYQERQRKH 71
          C + QE + +H
Sbjct: 61 CASLQEIKGRH 71


>UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253H0_CHLFF
          Length = 124

 Score = 69.4 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 2   SDEADEAYSVT----EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           +D  D   S+     E   +  INR  +KI        +C+  G  IP AR    P  T+
Sbjct: 51  TDTFDRTISLEVTTKEYELLRQINRALEKIEESSYG--ICDVSGEEIPLARLMAIPYATM 108

Query: 58  CVECQAYQER 67
            V+ Q+  E+
Sbjct: 109 TVKAQSQFEK 118


>UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7QCE7_CATAD
          Length = 275

 Score = 69.4 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A +   +  +    R   ++ A    V  CE+CG P+ + R + FP  TLC+ C+ 
Sbjct: 213 EHEMAIANNAREMLQQTERALARLAADTYGV--CESCGEPVGKYRLQAFPRATLCMSCKQ 270

Query: 64  YQERQ 68
            QER+
Sbjct: 271 KQERR 275


>UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gracilis RM3268
           RepID=C8PIH5_9PROT
          Length = 118

 Score = 69.4 bits (169), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D+ D A   T+                 I    ++I      +  CE+CG  I   R K
Sbjct: 40  ADDFDVASMNTDLSIEYSLNVNQQKAFLEIESALKRIENGTYGL--CESCGEQISLERLK 97

Query: 51  IFPGVTLCVECQAYQERQRK 70
           + P   LC+ C+   E+Q +
Sbjct: 98  VNPEARLCISCKEQAEKQNR 117


>UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68
           Tax=Alphaproteobacteria RepID=A7HW84_PARL1
          Length = 146

 Score = 69.4 bits (169), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A S TE+                I+   ++I+        CE  G PI   R  
Sbjct: 64  PDIADRASSETERSLELRTRDRQRKLVSKIDAAIRRIDEGTYG--YCEETGEPISLKRLD 121

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q   ER+ K Y
Sbjct: 122 ARPIATLSIEAQERHERREKVY 143


>UniRef50_UPI0001827371 putative prophage protein n=1 Tax=Enterobacter cancerogenus ATCC
          35316 RepID=UPI0001827371
          Length = 73

 Score = 69.4 bits (169), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A +  ++     I+  R++        +LCE C  PIPEARR   PGV LC+ 
Sbjct: 1  MADFIDLAQAREQEDRERHIHHARRRPA--SPSRFLCEECDAPIPEARRMAVPGVALCIT 58

Query: 61 CQAYQERQRKH 71
          CQ   E + KH
Sbjct: 59 CQEIAEMKNKH 69


>UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomycetales
           RepID=A1SL71_NOCSJ
          Length = 283

 Score = 69.4 bits (169), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + +     +E+  +  I R   +I+     V  CE+CGNPI + R   FP  TLC+ C+ 
Sbjct: 221 DHELTVLNSERDKLAQIERALARIDDGTYGV--CESCGNPIGKMRLMAFPRATLCMTCKQ 278

Query: 64  YQERQ 68
            +ER+
Sbjct: 279 REERR 283


>UniRef50_C9XYU8 Uncharacterized 8.5 kDa protein in gpA 5'region n=4
          Tax=Enterobacteriaceae RepID=C9XYU8_CROTZ
          Length = 74

 Score = 69.0 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D      E+     I++ R +        +LCE+C  PIPEARR   PGV LCV 
Sbjct: 1  MADVMDLVQQRVEEERERHIHKARSR--QAAPSRFLCESCNGPIPEARRAALPGVELCVT 58

Query: 61 CQAYQERQRKHY 72
          CQ  +E +  HY
Sbjct: 59 CQEIKELKSLHY 70


>UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Heliobacterium
           modesticaldum Ice1 RepID=B0TGP7_HELMI
          Length = 238

 Score = 69.0 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A        +  I + +++I+       +CE C   IP+AR    P  TLC+ECQ+++
Sbjct: 62  DLATRDRFSRELDEIAKAKRRISEGIYG--ICERCHQKIPDARMAAMPTATLCIECQSHE 119

Query: 66  ER 67
           E 
Sbjct: 120 EE 121


>UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 Tax=Paenibacillus
           RepID=C6D536_PAESJ
          Length = 234

 Score = 69.0 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A    E L +T I++  + ++        C ACG PIP+ R +  P    CVE    Q
Sbjct: 64  DLALLENEDLHLTRISQALEAMDNGTYG--QCRACGKPIPDERLEALPDSLYCVEHAPRQ 121

Query: 66  ERQRKH 71
           E   + 
Sbjct: 122 ETSHRQ 127


>UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermosinus
           carboxydivorans Nor1 RepID=A1HSA8_9FIRM
          Length = 227

 Score = 69.0 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  +    +K+ A      +C+ CG  I   R +  P    C+ C+   
Sbjct: 63  DLALRDNAHLLLEQVEHALEKVAAGNYG--ICDNCGREIGIERLQAIPYAARCIVCEKKY 120


>UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum
           RepID=C6I0P9_9BACT
          Length = 136

 Score = 69.0 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M +  D A           +++   ++         CE CG  I E R    P   LC++
Sbjct: 56  MGEGVDLALLEMRNRMKRSVDQALLRLEEGSYGN--CEDCGGEIEEKRLMAMPFAQLCIK 113

Query: 61  CQAYQERQRK 70
           CQ  +E   K
Sbjct: 114 CQRKKEELEK 123


>UniRef50_C6MQY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Geobacter sp.
          M18 RepID=C6MQY5_9DELT
          Length = 74

 Score = 69.0 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE D A  ++E+     +             +  CE CG PIPE RR+  PG T CV 
Sbjct: 1  MADEIDLAQEISERHLEAALAGHLDH-KPAAESLTHCEECGRPIPEGRRQAQPGCTRCVR 59

Query: 61 CQAYQE 66
          CQ+  E
Sbjct: 60 CQSGIE 65


>UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID=B0SIE7_LEPBA
          Length = 154

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 14/84 (16%)

Query: 1   MSDEADEAYS-----------VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           M D AD A               E  T+  I    +KI        +CE     IP AR 
Sbjct: 52  MGDIADIASELNSEALTSVLTENEIETLREIELALEKIENGTYG--ICEGTKKKIPLARL 109

Query: 50  KIFPGVTLCVECQAYQERQRKHYA 73
           K  P     VE       + ++ A
Sbjct: 110 KAIPWTRFTVEFAEQM-AKSRNRA 132


>UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8
           Tax=Deltaproteobacteria RepID=A1AL35_PELPD
          Length = 118

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A   +           E+  +  I     +I++      +CE CG+ I EAR K
Sbjct: 39  PDPTDRATQESDRNFELRIRDRERKLINKIKEALSRIDSGEFG--ICEECGDEIGEARLK 96

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           + P  TLC+ C+   E++ K 
Sbjct: 97  VRPVTTLCINCKLEAEKKEKR 117


>UniRef50_D2BWU8 Transcriptional regulator, TraR/DksA family n=4
          Tax=Enterobacteriaceae RepID=D2BWU8_DICD5
          Length = 69

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M DE D      EQ     I + R K       ++ C  CG PIPE RR+  PGVT C E
Sbjct: 1  MPDEIDRDQEFNEQRLEEMIEQNRFKPAT-TPSLHYCRLCGEPIPEKRRQTLPGVTTCTE 59

Query: 61 CQAYQERQRK 70
          CQA  ER+++
Sbjct: 60 CQAIIERRQR 69


>UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solanacearum UW551
           RepID=A3RXC3_RALSO
          Length = 224

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  +  + +  Q+I+        C+  G PI   R  
Sbjct: 143 PDPADRATIEEEHALELRTRDRERKLLKKVEQSIQRIDEGNYG--YCDETGEPIGVPRLL 200

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q  +E+++K +
Sbjct: 201 ARPTATLTLEAQERREKRQKLF 222


>UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=A1QYW3_BORT9
          Length = 127

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A S  E+  +  IN+   +I+ +      C AC   I   R    P   LC+ CQ  +E+
Sbjct: 64  ALSSVEKKKLHLINQALYRISQNTYGN--CLACDKSITRERLVAIPYAFLCISCQTKKEK 121

Query: 68  QRKH 71
           + K 
Sbjct: 122 KGKR 125


>UniRef50_B3QCL2 Transcriptional regulator, TraR/DksA family n=14
          Tax=Proteobacteria RepID=B3QCL2_RHOPT
          Length = 73

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ DEA ++ E+     I R   +I   G     C  CG PI EARRK  P  T CV+
Sbjct: 1  MTDQLDEAQALEERERDDCIARAAGQIK--GHGATHCVVCGEPIDEARRKAMPSATRCVD 58

Query: 61 CQAYQERQRKHY 72
          CQ  +ER  + +
Sbjct: 59 CQESRERWSRSH 70


>UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gammaproteobacteria
           RepID=A5EW31_DICNV
          Length = 143

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A    E           +  +  I++  ++I         CE C   I   R +
Sbjct: 58  ADLNDRASQEEEFSLELRTRDRERKLLRKIDKALERIKQGHFG--YCEQCDEEIGFHRLE 115

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC++C+   ER+ K +
Sbjct: 116 ARPTAELCIDCKHLAERKEKSF 137


>UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia RepID=Q2GEN7_NEOSM
          Length = 137

 Score = 68.6 bits (167), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D    A        ++ I+   +++         CE  G+ I   R  + P    CV+ Q
Sbjct: 61  DIIMSAQKRN--SLLSEIDEALERMEQGVYG--YCEETGDEIGFGRLDLEPTARYCVDVQ 116

Query: 63  AYQERQRK 70
              +++ +
Sbjct: 117 ERLDKKNR 124


>UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobacteria
           RepID=Q2LSS1_SYNAS
          Length = 150

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A   +           E+  +  +    ++I+     +  CE CG PI E R  
Sbjct: 69  PDPTDRASLESDRNFELRMRDRERKLIAKMQEAIKRIDEGEFGL--CEVCGGPISEKRLM 126

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  TLC++C+  QE+  K
Sbjct: 127 ARPVTTLCIDCKTKQEKLEK 146


>UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 Tax=Akkermansia
           muciniphila ATCC BAA-835 RepID=B2ULP7_AKKM8
          Length = 207

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 4   EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+   EQ  +  I +   +I+       +CE     IP  R +  P   L VEC
Sbjct: 110 DRDFALSLLSKEQDGLYEIEQALARIDNGTYG--ICEMSYKVIPILRLEAIPFARLTVEC 167

Query: 62  QAYQERQRKHYA 73
           QA  E+++   A
Sbjct: 168 QAQWEKEKGQNA 179


>UniRef50_A3YA40 C4-type zinc finger protein, DksA/TraR family protein n=1
          Tax=Marinomonas sp. MED121 RepID=A3YA40_9GAMM
          Length = 73

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI----PVYLCEACGNPIPEARRKIFPGVTLC 58
          DE D A    +      I    ++ +            C  CG  IP  R K  P V  C
Sbjct: 2  DEFDHAQQQEQAFRDKAIAHQLKQPSETPYEDEDGYRYCLDCGQDIPLKRIKALPHVVRC 61

Query: 59 VECQAYQER 67
          V CQ  +ER
Sbjct: 62 VSCQDKKER 70


>UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 Tax=Myxococcales
           RepID=D0LZD2_HALO1
          Length = 124

 Score = 68.2 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 13/83 (15%)

Query: 1   MSDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           ++DE D A S +           E+  +  ++   +K+        +CE C  PI + R 
Sbjct: 43  LADEMDLASSESYQSFEFRLRGREKSLLNKLDLALRKLGEGTFG--ICEVCEEPIGKKRL 100

Query: 50  KIFPGVTLCVECQAYQERQRKHY 72
           +  P  TLC++C+  QER  + +
Sbjct: 101 EARPETTLCIQCKEAQERDERVF 123


>UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria RepID=Q5UF45_9PROT
          Length = 202

 Score = 68.2 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I+   + +  +      CE+CG  I   R +
Sbjct: 121 PDSLDRAAKEEEFMLELRKRERERKLIAKIDLSLKDLEDNLYG--YCESCGVEIGIKRLE 178

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P  T C++C+   E + K 
Sbjct: 179 ARPTATKCIDCKTVDEIKEKQ 199


>UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfotomaculum acetoxidans DSM 771
           RepID=C8W4E4_DESAS
          Length = 231

 Score = 68.2 bits (166), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  +    + I        +C+ CG  I  AR    P  TLC EC+  Q
Sbjct: 63  DFALRDDAMLKIRAVEDALKNIEMGKYG--ICDICGKEIGYARLTALPRTTLCKECKEAQ 120

Query: 66  ER 67
           ER
Sbjct: 121 ER 122


>UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacteria
           RepID=A4SHJ5_AERS4
          Length = 128

 Score = 68.2 bits (166), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 1   MSDEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           M+DE D A     +             +  +    ++IN        CE+CG+ I   R 
Sbjct: 43  MADEIDRASIEEARRLELNRIEHDKLHLRKLQGALRRINEGDFG--YCESCGDEISLKRL 100

Query: 50  KIFPGVTLCVECQAYQERQRKH 71
           +  P    CVECQ+ +E    H
Sbjct: 101 QARPESRFCVECQSTKEFNDTH 122


>UniRef50_Q65AH5 TraR protein n=4 Tax=Enterobacteriaceae RepID=Q65AH5_YERPE
          Length = 88

 Score = 68.2 bits (166), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 34/72 (47%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE D      E L    I   RQ+    G     CE CGN IP  R++  PGV  C E
Sbjct: 15 MADELDLLQEQDELLNQLHIQAARQRSCLEGKSRKRCECCGNRIPLRRQQAIPGVRTCTE 74

Query: 61 CQAYQERQRKHY 72
          CQ   E ++K Y
Sbjct: 75 CQRVLEIRQKQY 86


>UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacteria
           RepID=A8PLZ9_9COXI
          Length = 295

 Score = 67.8 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 13/82 (15%)

Query: 1   MSDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           + D +D A    E           +  +  I     +++        C +CG  I   R 
Sbjct: 213 LPDMSDRATQEEEFNLELRARDRERKLIKKIEDALHQLDEGHYG--FCSSCGVEIGIRRL 270

Query: 50  KIFPGVTLCVECQAYQERQRKH 71
           +  P   LC++C+   E + K 
Sbjct: 271 EARPTANLCIDCKTLDEIREKQ 292


>UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2
           Tax=Desulfitobacterium hafniense RepID=B8FT18_DESHD
          Length = 222

 Score = 67.8 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A        +  I+   Q+       +  CE C   IP  R +  P  T+C EC   +
Sbjct: 59  DVAIHDRLHHRIQAIDSALQRYEEGKYGL--CEHCQKEIPLGRLEALPFTTVCTECSRLE 116

Query: 66  ERQRKH 71
           E + +H
Sbjct: 117 EMEEQH 122


>UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 Tax=Victivallis
           vadensis ATCC BAA-548 RepID=D1N407_9BACT
          Length = 133

 Score = 67.8 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            E +      E   +  I    +++         C+ CG PI E R  I P    CV+C+
Sbjct: 64  HEMELQLLSEEGDVLRLIEDAIKRLVDGEYGK--CQECGEPISEGRLAIRPYAVYCVKCK 121

Query: 63  AYQERQRKH 71
              E+Q  H
Sbjct: 122 EMHEKQGWH 130


>UniRef50_Q125W5 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
          sp. JS666 RepID=Q125W5_POLSJ
          Length = 79

 Score = 67.8 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGI------PVYLC--EACGNPIPEARRKIF 52
          M D+ D A    +      +     +                C  + CG PIPE RRK  
Sbjct: 1  MPDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKAL 60

Query: 53 PGVTLCVECQAYQERQRKH 71
          PGV  CVECQ   E++   
Sbjct: 61 PGVKFCVECQQRLEKKGMR 79


>UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q021M5_SOLUE
          Length = 143

 Score = 67.8 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D     TE+                +    Q+I      V  C  C N IP  R K
Sbjct: 54  ADSLDRIQHATEREMAIRRIELDFSKVQSVRSALQRIAEGTYGV--CSECDNEIPGKRLK 111

Query: 51  IFPGVTLCVECQAYQERQR 69
             P    C++CQ   +R+R
Sbjct: 112 AVPWTPYCLDCQDSADRRR 130


>UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillus
           RepID=Q2B4E3_9BACI
          Length = 252

 Score = 67.8 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D+A    +   +  +N+  Q I         C  CG  +P  R +  P    CV+
Sbjct: 63  EKDQAIEEHQNEELDKVNKALQAIEDGTYGK--CRECGKDLPFERLEAVPTALYCVD 117


>UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35 Tax=Proteobacteria
           RepID=B4SQA3_STRM5
          Length = 405

 Score = 67.8 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEA+ A   TE           +  +  I+   +++ A       C   G  I   R + 
Sbjct: 325 DEAERATRETENSLELRTRDRYRKLIGKIDSTLKRLEAGDYG--YCVDTGEEIGLERLEA 382

Query: 52  FPGVTLCVECQAYQERQRKH 71
                  ++ Q   E  +K 
Sbjct: 383 RLTAERTIDAQERWEHLQKQ 402


>UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H0G2_UNCTG
          Length = 119

 Score = 67.8 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE D A   +E+             +  IN    KI  +      CE C N I   R K+
Sbjct: 41  DEIDTASQNSEKEMYFELVASDKMTLDAINDALVKIEKNAYGK--CEGCSNNILLERLKV 98

Query: 52  FPGVTLCVECQAYQE 66
            P    C++CQ   E
Sbjct: 99  IPWAKYCIQCQEESE 113


>UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3 Tax=Comamonadaceae
           RepID=Q221D7_RHOFD
          Length = 124

 Score = 67.4 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + E + A    +   +  ++   ++I      +  C  CG  IP AR    P    C+ C
Sbjct: 55  ARELEFALDARDSEELDRLDAALRRIEDGSYGL--CVDCGVGIPAARLHAAPDALRCIAC 112

Query: 62  QAYQERQRKHYA 73
           Q   E+ +   A
Sbjct: 113 QEKLEKAQARQA 124


>UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermobaculum
           terrenum ATCC BAA-798 RepID=D1CBT8_THET1
          Length = 126

 Score = 67.4 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A     +  +  I    ++++       +C  CG  IP  R    P    CV  Q 
Sbjct: 62  EKEIALQRNLRSVLNEIEAALKRMDEGTYG--ICIDCGQEIPIERLMARPYAVRCVADQE 119

Query: 64  YQERQRK 70
             +R  +
Sbjct: 120 KYDRVHR 126


>UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YTEA B.subtilis
           ortholog n=1 Tax=Clostridium acetobutylicum
           RepID=Q97H97_CLOAB
          Length = 200

 Score = 67.4 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            A+   E+  +  I     K+   G    +CE CG PI E R +  P    CVECQ  
Sbjct: 64  MAFRKNEEALLNKIGNAIDKVEHGGYG--ICEVCGKPISEERLEFVPYAENCVECQNK 119


>UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovibrio yellowstonii
           DSM 11347 RepID=B5YGE3_THEYD
          Length = 129

 Score = 67.4 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           +S++       T +  +  I    +K+        +CE CG+ IPE R KI P    C +
Sbjct: 56  LSEDISLKQLSTHRDILKKIEEALRKLEEGTYG--ICEMCGDEIPEERLKILPFAIYCRD 113

Query: 61  CQAYQERQRK 70
           CQ   E   K
Sbjct: 114 CQEKIEMIEK 123


>UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=B8J371_DESDA
          Length = 120

 Score = 67.4 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +           E+  +  I     +I+       +CE CG+ I   R K
Sbjct: 39  ADPADRATAESDRAFTLRIRDRERRLIRKIQAALTRIDDGTYG--ICEDCGDDISIPRLK 96

Query: 51  IFPGVTLCVECQAYQERQR 69
             P   LC+ C+A QE   
Sbjct: 97  ARPVTRLCINCKAKQEEDE 115


>UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID=B2S244_TREPS
          Length = 120

 Score = 67.4 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 2   SDEADEAYSVT----EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           SD+ D     +    +   +  I     +I         C  CG  IPE R +  P   +
Sbjct: 48  SDDMDRKMLESLSAKDLRCLQQIESALLRIEQGRYGK--CADCGESIPEDRLRAIPYSLM 105

Query: 58  CVECQAYQERQRKHY 72
           C+ECQ+ +E +R+ +
Sbjct: 106 CIECQSARESKRRAF 120


>UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas
           acidaminovorans RepID=B0VG86_9BACT
          Length = 148

 Score = 67.4 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              +E+  +  +N   Q+I+       +CE CG  I E R +I P  T CV C+   E +
Sbjct: 85  MLESEREKIRQLNEALQRISDGTYG--ICEFCGEFIQENRLEIIPYATCCVACKEKNEDK 142

Query: 69  RKH 71
           ++ 
Sbjct: 143 KRR 145


>UniRef50_Q7N7S5 Similar to unknown protein n=1 Tax=Photorhabdus luminescens
          subsp. laumondii RepID=Q7N7S5_PHOLL
          Length = 83

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 1  MSDEAD--EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MSD+ D   A +VT       I  +R++++   + +  CE CG+ I E RR+I PGV LC
Sbjct: 1  MSDDIDDTRAQAVTAMWLEEQIAVVRREMHTGRVSLKYCEGCGDRIDEQRRQILPGVQLC 60

Query: 59 VECQAYQERQRKHY 72
          V CQ   E   +  
Sbjct: 61 VGCQEVAEHWEQVR 74


>UniRef50_B8F4E6 DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR
          family n=8 Tax=root RepID=B8F4E6_HAEPS
          Length = 72

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D+ D A  + E+     + ++R K       +  CE C  PIPEARR+   G T C++
Sbjct: 1  MKDQIDRANELAEKEREFALAKLRNKPT--ACSLIHCEDCDEPIPEARRQNVQGCTRCID 58

Query: 61 CQAYQERQRKHY 72
          CQ   E ++K Y
Sbjct: 59 CQQIYEYKQKGY 70


>UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=D2L3E3_9DELT
          Length = 131

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 2   SDEADEA-----------YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A               ++  +  IN    ++        +C+ CG  I  AR +
Sbjct: 39  ADVADRATAESDRHLTILMRERDRQLIGEINEALARVKDGDYG--ICQECGEEIGLARLR 96

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TLCV C++  E   + Y
Sbjct: 97  AQPTATLCVHCKSMLEEMGRPY 118


>UniRef50_B5XPP1 Phage/conjugal plasmid C-4 type zinc finger protein, TraR family
          n=14 Tax=Enterobacteriaceae RepID=B5XPP1_KLEP3
          Length = 69

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M DE D      EQ     I + R K       ++ C  CG PIPE RR+  PG+T C E
Sbjct: 1  MPDEIDRDQEFNEQRLEEMIEQSRFKP-GSAPSLFHCRVCGKPIPEKRRQTLPGITTCKE 59

Query: 61 CQAYQERQR 69
          CQ   ER  
Sbjct: 60 CQEKLERHS 68


>UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3 Tax=Clostridium
           RepID=A0Q071_CLONN
          Length = 206

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A    E   +  I+     +        +C  C N IP+ R +  P    CV C+  Q+
Sbjct: 64  IALEKAELEKLHEISESLYDMEHGTYG--ICRICKNQIPDDRLEAVPYAKYCVHCKNNQD 121

Query: 67  R 67
           +
Sbjct: 122 K 122


>UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 Tax=Geobacter
           RepID=B3EAN1_GEOLS
          Length = 218

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A S             E+  +  I+    +I        +CE C   IP  R K+
Sbjct: 120 DIYDQASSERDRELGLLLNDREREKLHSIDEALLRIAEGEYG--ICEECDEDIPMGRLKV 177

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P    CV+C++  E+ +  
Sbjct: 178 LPFTRHCVKCKSDLEKFQAQ 197


>UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20
           RepID=Q30V43_DESDG
          Length = 149

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D A        +  +     +I   G     CE CG+ I EAR K  P  TLC+ CQ  
Sbjct: 75  LDVALRGRLARQLAAVESALHRIATGGFGR--CEECGDEIGEARLKANPTTTLCIHCQED 132

Query: 65  QERQRKHY 72
           +E +    
Sbjct: 133 REAEAARR 140


>UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopirellula baltica
           RepID=Q7UR73_RHOBA
          Length = 140

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE +      E   +  I     +          CE CG PIP  R K  P    C+ C+
Sbjct: 53  DELNSQLVEVESRELLAIEEAIARFEEGRFG--DCEDCGKPIPLNRLKAIPYAVDCINCR 110

Query: 63  AYQERQ 68
              ER+
Sbjct: 111 RAAERE 116


>UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788757
          Length = 187

 Score = 66.7 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           D A   T +  +  I+   Q+++        C  CG  IP  R +  P    C+E
Sbjct: 66  DLAIQETLERELEQIDAALQRMDQGEYGT--CAECGREIPYERLEALPYTAYCLE 118


>UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae RepID=Q2GI38_EHRCR
          Length = 152

 Score = 66.7 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A                +  +  IN+  Q+I+        CE  G  I  AR +
Sbjct: 57  ADLTDMATKEHNIVLILNTRKRNEALIIEINKAIQRIDDGLYG--YCEETGEKIGIARLE 114

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P     +E Q  +E+Q+K Y+
Sbjct: 115 ANPITLYSIEEQERREKQQKLYS 137


>UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastopirellula marina DSM
           3645 RepID=A3ZQT2_9PLAN
          Length = 134

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE     +  E   +  I++  ++I         CE C   IP AR +  P  TLC++CQ
Sbjct: 54  DELSSQLAEVESRELAQIDKALERIRGGSFG--ECEGCTCKIPTARLQALPYATLCIKCQ 111

Query: 63  AYQER 67
              E 
Sbjct: 112 RELEE 116


>UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteobacteria
           RepID=DKSA_HAEIN
          Length = 145

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 9/81 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKI---------NAHGIPVYLCEACGNPIPEARRKIF 52
            D AD A    E           +K+                  C+ CG  I   R +  
Sbjct: 64  PDPADRATQEEEFSLELRNRDRERKLMKKIEATLKKLDTDDFGYCDCCGEEIGIRRLEAR 123

Query: 53  PGVTLCVECQAYQERQRKHYA 73
           P   LC++C+   E + K  A
Sbjct: 124 PTADLCIDCKTLAEIREKQVA 144


>UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10
           Tax=Thermoanaerobacteraceae RepID=B0K2T3_THEPX
          Length = 206

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A    E+  +  I    +++        +C  C  PI E R +  P   LC EC  
Sbjct: 63  EKNYALKDNEKYILRQIEDAFKRMEIGTYG--ICAHCHKPIEEERLEALPYTVLCAECAK 120


>UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14 Tax=Bacillaceae
           RepID=C9S0U4_GEOSY
          Length = 269

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A     +  +  I R    I         C  CG PIP  R +  P    C E
Sbjct: 63  EKDLALKEHAERELREIERALGAIADGTYGT--CRVCGRPIPYERLEALPTTLYCRE 117


>UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus
           Koribacter versatilis Ellin345 RepID=Q1IJ15_ACIBL
          Length = 121

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E     S  ++  +  +     +I         C +CG+ I   R +  P    C+ CQ 
Sbjct: 53  EFLFTQSANDRNLLQMVEGALIRIGEGTYG--ECVSCGSEINSKRLEAVPWARYCIGCQE 110

Query: 64  YQERQR 69
             E+  
Sbjct: 111 KIEKGE 116


>UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1AEE3_THECD
          Length = 114

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            D+     +   + T+  I     ++      +  CE CG PIPE R +I P    CV C
Sbjct: 49  PDDTALVQADALRQTLEDIEEALLRLRQGRYGL--CEKCGKPIPEGRLEILPYARCCVSC 106

Query: 62  QAYQ 65
           Q  +
Sbjct: 107 QQRR 110


>UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q9W6_SULNB
          Length = 118

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D A    ++  +  I+    KI        +CE C  PI +AR ++      C+ C+  
Sbjct: 55  VDSAILEQQRKELAEIDLALDKIKNGTYG--ICEMCEEPIGKARLEVKNFARFCITCREI 112

Query: 65  QERQRK 70
            E++++
Sbjct: 113 NEKEQQ 118


>UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 Tax=Proteobacteria
           RepID=B5EG80_GEOBB
          Length = 118

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A   +           E+  +  I     +I A      +CE C   I EAR K
Sbjct: 39  PDPTDRATQESDRTFELRIRDRERKLIVKIQEALARIEAGTFG--ICEVCEEDISEARLK 96

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  TLC++C+  QE++ +
Sbjct: 97  ARPVTTLCIDCKMEQEKKER 116


>UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 Tax=Chthoniobacter
           flavus Ellin428 RepID=B4D2T0_9BACT
          Length = 187

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +DE+       +Q  +  IN    KI      V  CE  G PIP  R K  P      E 
Sbjct: 83  ADES-RGVLSHDQDLLVEINHALSKIEEGTYGV--CELTGQPIPAERLKAVPWARFTREA 139

Query: 62  QAYQERQR 69
           QA  E + 
Sbjct: 140 QAEFEARG 147


>UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemmata obscuriglobus UQM
          2246 RepID=UPI00016C4B65
          Length = 95

 Score = 65.9 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           +  E   +  I R  +++ A       CE C   IP AR    P  T CV+CQ   ER
Sbjct: 1  MAELEAKELAQIERALRRLKAGTYGK--CEVCSIKIPVARLNALPFSTFCVDCQREMER 57


>UniRef50_B8FC44 Transcriptional regulator, TraR/DksA family n=2
          Tax=Proteobacteria RepID=B8FC44_DESAA
          Length = 69

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D A       T   I   R + +     +  C+ CG+PIPEARRK  PG T C++
Sbjct: 1  MPDPTDRAQEAAADYTRFSIEAARSRGSQST--LADCQDCGDPIPEARRKAVPGCTRCLD 58

Query: 61 CQAYQERQR 69
          CQ   E++R
Sbjct: 59 CQETYEQRR 67


>UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0ZG84_BREBN
          Length = 257

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A    ++ T+  I++  Q++      +  C  CG  IP  R +  P    C E
Sbjct: 63  EKDLALDSLDRETLKEIDQALQRMEEGTYGL--CTVCGEQIPVERLEALPQSQTCKE 117


>UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A2J0_NATTJ
          Length = 216

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           E D   S   +  +  I    +KI         CE+CG  I   R    P    C+ C
Sbjct: 60  EKDTTLSNLREQKLREIEIALEKIANGDYGK--CESCGKEINNERLDAVPYTRYCISC 115


>UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria RepID=Q3A0W2_PELCD
          Length = 118

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A   +           E+  +  I +  ++I         CE C  PI   R +
Sbjct: 39  PDPTDRASLESDRNFELRIRDRERKLIMKIRQALERIEQGTFG--ECECCEEPIGAERLR 96

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  TLC++C+  QER+ K
Sbjct: 97  ARPVTTLCIDCKTEQERKEK 116


>UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1 Tax=Thiomicrospira
           crunogena XCL-2 RepID=Q31G85_THICR
          Length = 142

 Score = 65.5 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D +D A    E           +  ++ I++  + I         C+  G  I  AR +
Sbjct: 61  ADPSDRASQEEEFALELRTRDRERKLISKIDKSLRDIEDGDYG--YCKMSGEEIGLARME 118

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P  TL VE +  QE + K 
Sbjct: 119 ARPTATLTVEMKTKQEMREKQ 139


>UniRef50_A1VE28 Transcriptional regulator, TraR/DksA family n=12
          Tax=Desulfovibrio RepID=A1VE28_DESVV
          Length = 78

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAH-----GIPVYLCEACGNPIPEARRKIFPGV 55
          M+D  D+A     +     I+  R ++ +            C  CG  IPEAR K  PG 
Sbjct: 6  MADIFDQASDYEARDREAAISAARNRLASGPGPEWIDGKPCCRECGEVIPEARVKALPGC 65

Query: 56 TLCVECQAYQE 66
           LC EC    E
Sbjct: 66 GLCRECAEEME 76


>UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Thermodesulfovibrio
           yellowstonii DSM 11347 RepID=B5YK78_THEYD
          Length = 123

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               E+  +  I +  +KIN       +CEACG  IP  R +  P   LC+EC+  QE  
Sbjct: 60  LRDRERKLLKKIEKTLEKINNGTYG--ICEACGAEIPIERLEARPVTDLCIECKTEQEEA 117

Query: 69  RK 70
            K
Sbjct: 118 EK 119


>UniRef50_Q4QK09 DnaK suppressor protein, bacteriophage PSP3 gp34 homolog n=7
          Tax=Haemophilus influenzae RepID=Q4QK09_HAEI8
          Length = 71

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A  + E      + + R       +    CE C  PIPE RR++  GVT CV 
Sbjct: 1  MTDQFDRAQQLEEMQREIALKKHR---TFKAVSRLYCEDCDAPIPEKRRQMIQGVTRCVT 57

Query: 61 CQAYQERQRKHY 72
          CQ   E Q++++
Sbjct: 58 CQQRFEIQQRNF 69


>UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subtilis group
           RepID=G16O_BACSU
          Length = 163

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D+     ++  +  +NR  QK+      V  CE  G  IP  R +  P   + VE QA  
Sbjct: 60  DQTVKEIDRELLEEVNRALQKMKDGTYGV--CEKTGQEIPYERLEAVPYARMTVEAQADV 117

Query: 66  E 66
           E
Sbjct: 118 E 118


>UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 Tax=Streptomyces
           RepID=D1X2L9_9ACTO
          Length = 248

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +   Q  +    R   ++ A    +  CE CG PI +AR + FP  TLCVE + 
Sbjct: 185 EHELSLAANAQEMLEQTERALARLEAGTYGL--CEICGKPIGKARMQAFPRATLCVEDKQ 242

Query: 64  YQERQR 69
            QER+ 
Sbjct: 243 KQERRG 248


>UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificaceae
           RepID=Y250_AQUAE
          Length = 145

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            S  E  T+  I+   +KI        +CE CG  IPE R    P    C +C    ER+
Sbjct: 60  LSNVEIATLREIDYALEKIEKGTYG--ICERCGEEIPEPRLCAIPWTRYCAKCAEEVERE 117

Query: 69  RKHY 72
              Y
Sbjct: 118 SGTY 121


>UniRef50_A4SL94 Phage protein n=2 Tax=root RepID=A4SL94_AERS4
          Length = 69

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 37/68 (54%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D+ D A     ++  T + R   K +  G+ ++ CE C +PIPEARR   PGV LCV CQ
Sbjct: 2  DDIDRANQHAARMLTTNLARQVGKGHYQGMSLHHCEECDDPIPEARRHHVPGVRLCVPCQ 61

Query: 63 AYQERQRK 70
             E+  +
Sbjct: 62 TRIEQLAR 69


>UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=D2L9K5_9DELT
          Length = 120

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +++             +  I     +I+        C  CG  I  AR K
Sbjct: 39  ADPADRATAESDRAFTLRLRDRERRLIKKIKEALDRIDEGTYG--ECVECGEDISVARMK 96

Query: 51  IFPGVTLCVECQAYQERQR 69
             P  TLC++C++ QE   
Sbjct: 97  ARPVTTLCIKCKSRQEADE 115


>UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11 Tax=Pseudomonas
           RepID=A5W685_PSEP1
          Length = 154

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SD AD A    E+             +  +     +I         C+  G PI   R  
Sbjct: 72  SDPADVASVEEERSWLVNAIDRDQRLLPQLEMALDRIADESFG--WCDDSGEPIGLKRLL 129

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           I P    C+E Q   E+  +H
Sbjct: 130 ISPTTKYCIEAQERHEQLDRH 150


>UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA
           RepID=C1I8K1_9CLOT
          Length = 204

 Score = 65.5 bits (159), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            A    E+  +  I+   + I+        C+ CG  I + R    P    C+EC
Sbjct: 64  RALEANERALLDKIDDAVRAIDEGSYGK--CQKCGKEIDKERLDFLPYALNCIEC 116


>UniRef50_B4F0L8 Phage protein n=4 Tax=Enterobacteriaceae RepID=B4F0L8_PROMH
          Length = 73

 Score = 65.1 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MS E D A   ++ L    I  +  +    G+  + CE CG  IPE RR    G T C +
Sbjct: 1  MSKEMDLACEQSQLLLDKQIKAVTGR--YIGVSAFECEDCGREIPEKRRIAVMGCTRCAD 58

Query: 61 CQAYQERQRKHY 72
          CQ   E + KHY
Sbjct: 59 CQTVYELKSKHY 70


>UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 Tax=Opitutaceae
           RepID=B1ZV03_OPITP
          Length = 297

 Score = 65.1 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  +EQ  +T I+   ++I+       +CE    PI + R    
Sbjct: 195 MADAGTDTFDRDFALSLVSSEQEALTEIDAAIKRIHDGTYG--ICEITQKPIAKERLLAV 252

Query: 53  PGVTLCVECQAYQERQR 69
           P      E Q   E+ R
Sbjct: 253 PFTRYSAEAQKDLEKNR 269


>UniRef50_A8GA41 Transcriptional regulator, TraR/DksA family n=1 Tax=Serratia
          proteamaculans 568 RepID=A8GA41_SERP5
          Length = 73

 Score = 65.1 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A      +    I   R  +         C  C   IPE RR+  PGV+ CV 
Sbjct: 1  MADTIDMAQERQALMLEKQIAHARPVVTQA--SAQFCADCDGEIPEVRRRAIPGVSRCVA 58

Query: 61 CQAYQERQRKHY 72
          CQ   E Q++H+
Sbjct: 59 CQEVSEAQQRHF 70


>UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria RepID=DKSA_ECO57
          Length = 151

 Score = 65.1 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I +  +K+         CE+CG  I   R +
Sbjct: 70  PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFG--YCESCGVEIGIRRLE 127

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P   LC++C+   E + K  A
Sbjct: 128 ARPTADLCIDCKTLAEIREKQMA 150


>UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter butzleri RM4018
           RepID=A8EWK7_ARCB4
          Length = 123

 Score = 65.1 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
            +   +  I    +KI        +C+ CG  IP  R K  P    C EC+   E++ 
Sbjct: 62  HQLDELKQIEEALKKITLGTYG--ICDMCGINIPLGRLKAKPFAKFCTECRTVYEQEN 117


>UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01TC0_SOLUE
          Length = 136

 Score = 65.1 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            S  +  T+  ++   ++I         C  CG PI  AR +  P    C   Q   E
Sbjct: 70  NSSVDSETLQQVDDALRRIEQGSYGK--CVICGKPIEPARLEAIPWTPYCKADQERLE 125


>UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 Tax=Geobacter
           RepID=C6E710_GEOSM
          Length = 130

 Score = 65.1 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M  +A  A +   +  +T +   ++++         CE CG  I   R ++ P    CV 
Sbjct: 57  MLSDAGLAIADIRRNQLTALEEAQRRVEQGTYGK--CENCGEVIDIQRLRLMPFAAYCVS 114

Query: 61  CQAYQERQRK 70
           CQ  +E   K
Sbjct: 115 CQKEKEGPGK 124


>UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F3S7_ACIC5
          Length = 139

 Score = 65.1 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D AD+A    +Q             ++ +    +++         C  CG  I   R + 
Sbjct: 56  DPADQAVMSYQQELIFSQGTNKHTQLSLVRLALERLEDGSYG--ECAECGEDISPRRLEA 113

Query: 52  FPGVTLCVECQAYQE 66
            P    C+ CQ   E
Sbjct: 114 VPWTPYCISCQEKVE 128


>UniRef50_C0QW50 DNA-binding transcriptional regulator of transcription, DnaK
           suppressor protein n=2 Tax=Brachyspira
           RepID=C0QW50_BRAHW
          Length = 121

 Score = 64.7 bits (157), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
           S  E+  +  +N   ++I         C  C   I E R    P    CV C +  E ++
Sbjct: 59  SQKEKDKLDMLNNALKRIEEGTYGK--CIDCKEEINEERLTALPYTLRCVNCMSKYEDKK 116

Query: 70  KH 71
           + 
Sbjct: 117 RR 118


>UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family protein n=1
           Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX5_9PROT
          Length = 123

 Score = 64.7 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D+A               E+  +  I++  ++I         C+ACG PI   R +
Sbjct: 42  PDPTDQASMEIDRNFDLKIKDRERRLIKKIDQAIERIQNGEFG--ECDACGGPISVKRLE 99

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TLC+EC+  QE++ +  
Sbjct: 100 ARPVTTLCIECKTAQEQEERTR 121


>UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2
           Tax=Planctomycetaceae RepID=D2R7B0_9PLAN
          Length = 123

 Score = 64.7 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 10/72 (13%)

Query: 1   MSD--------EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D        E   +    +  T+  I    ++I A    V  C  CG  IP+AR ++ 
Sbjct: 50  MADVGTDNFEQEFTLSLMEHDGSTLEQIEAALERIEAGAYGV--CTECGCKIPKARLEVL 107

Query: 53  PGVTLCVECQAY 64
           P    CV+C   
Sbjct: 108 PYTAHCVKCAEK 119


>UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ESP2_OCEIH
          Length = 224

 Score = 64.7 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A     +  +  IN     I        +C  CG  IP  R +  P    CV  + 
Sbjct: 62  EKDIALQEHTEKELEDINAALHAIEEGTYG--ICTVCGEDIPHERLEAIPTTDRCV--KH 117

Query: 64  YQERQRKHY 72
             E  R+ Y
Sbjct: 118 ANEGGRERY 126


>UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q029W8_SOLUE
          Length = 149

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 22/75 (29%), Gaps = 13/75 (17%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D +    E              +  I     +++     V  C  C  PI   R  
Sbjct: 59  SDEGDLSQQHHEEWIFLNRNTIDMKLLREIADALHRMDTGHYGV--CPECEEPISAKRLD 116

Query: 51  IFPGVTLCVECQAYQ 65
             P    CV CQ   
Sbjct: 117 AVPWARYCVTCQEKI 131


>UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium
           DG1235 RepID=B5JMU6_9BACT
          Length = 280

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 10/75 (13%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  +EQ  +  I     +I        +CE  G  I E R    
Sbjct: 176 MADAGTDTFDRDFALSMVSSEQDALQEIEEAIDRIFKGTYG--ICEMTGKQIREERLMAV 233

Query: 53  PGVTLCVECQAYQER 67
           P     ++ Q   E+
Sbjct: 234 PFTRYSMKTQEQIEK 248


>UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR family n=2
           Tax=Alcanivorax RepID=Q0VNX0_ALCBS
          Length = 140

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A               +Q  +  I    +++         C+  G+PI   R  
Sbjct: 55  ADPLDAAVEEETCRHQLRFMARQQALLGKIRGALRRLQNGDYG--YCKISGDPIGLPRLL 112

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P    C E +A  E+  +HYA
Sbjct: 113 ARPTTEYCAEVKARLEQNERHYA 135


>UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX4_9PROT
          Length = 116

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
           ++  +  I    ++I        +CE C  PI E R KI P    C+ C+   E++ K
Sbjct: 61  QKQELKEIEEALKRIEEGSYG--ICEMCDEPIQEERLKIKPYAKYCIICREIIEKEEK 116


>UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID=C6J3C7_9BACL
          Length = 245

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           D A +   +L +  +    ++I         C  CG PI   R +  P    C +
Sbjct: 66  DLALAEHHELHLARVEDALERIEDGSYG--YCATCGKPISYERLRAIPETAYCKD 118


>UniRef50_Q88IG2 C4-type zinc finger protein, DksA/TraR family n=1 Tax=Pseudomonas
          putida KT2440 RepID=Q88IG2_PSEPK
          Length = 72

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A    +      ++            +  C  CG  IPE RR    G   C+E
Sbjct: 1  MADIADLANDRAQWHLDLVLSARL--PAPECESLEDCVGCGGSIPEPRRLAVQGCQRCIE 58

Query: 61 CQAYQERQRKHYA 73
          CQ + E++   YA
Sbjct: 59 CQGFFEKKGARYA 71


>UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 Tax=Nautilia
           profundicola AmH RepID=B9L783_NAUPA
          Length = 117

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)

Query: 3   DEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEAD A +             ++  +  IN   +KI+       +CE C +PI EAR KI
Sbjct: 41  DEADFAAASMDSGRDYQIYINQKKELEEINDALKKIDEGTFG--ICEMCEDPIQEARLKI 98

Query: 52  FPGVTLCVECQAYQERQRK 70
            P    C+ C+   E++ K
Sbjct: 99  KPYAKYCIICREIIEKEGK 117


>UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 Tax=Burkholderia
           multivorans RepID=A9AKZ2_BURM1
          Length = 256

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A    +   +  I R +Q++         C  C  P+  AR +  P    C  CQA
Sbjct: 185 DVDHALIGMKLAELRAIRRAQQRMVDGSYG--DCIDCDGPVGYARLRARPTAERCTHCQA 242

Query: 64  YQERQ 68
             ER+
Sbjct: 243 LYERR 247


>UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bilis ATCC 43879
           RepID=C3XG00_9HELI
          Length = 122

 Score = 64.0 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D++     Q  M  I+    K +       +CE C + I   R +  P    C+ C+  
Sbjct: 54  FDDSMLERNQKEMKEISASLAKFDDGIYG--ICEMCEDEIGIERLQAKPHARFCINCREI 111

Query: 65  QERQRKH 71
            E+  K 
Sbjct: 112 YEKSEKQ 118


>UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A882_GEMAT
          Length = 127

 Score = 64.0 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 8/78 (10%)

Query: 1   MSDEADEAYSVT--------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D+  +A            E   +  +++  +++         C  CG  I   R    
Sbjct: 49  MADQGTDAMEREKAFLFASKEGRFLWHLDQALRRLYKAPATFGKCHQCGEDIAFERLDAL 108

Query: 53  PGVTLCVECQAYQERQRK 70
           P    C+ C+  +E  +K
Sbjct: 109 PNARYCIACKQREEDAKK 126


>UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus subtilis group
           RepID=YTEA_BACSU
          Length = 239

 Score = 64.0 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
           E D A  + E+  +  I    + I        +CE  G  IP  R +  P  T
Sbjct: 63  EKDIALDLHEREHLRDIEHSLKAIENGTYG--ICEVSGKEIPFERLEALPTAT 113


>UniRef50_Q4FUG7 Possible phage TraR/DksA family protein n=1 Tax=Psychrobacter
          arcticus 273-4 RepID=Q4FUG7_PSYA2
          Length = 66

 Score = 64.0 bits (155), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+AD A    +      ++R           +  C  CG  IP  R +   GVTLCV+
Sbjct: 1  MADDADRANDYVDLTMAHCLSRA---PKFDKPSLTECMECGEDIPAKR-QAMGGVTLCVD 56

Query: 61 CQAYQERQRK 70
          CQ+  E++ K
Sbjct: 57 CQSVFEKRGK 66


>UniRef50_B9Z318 Transcriptional regulator, TraR/DksA family n=2
          Tax=Chromobacterium group RepID=B9Z318_9NEIS
          Length = 68

 Score = 64.0 bits (155), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A  +  +     I   R  +    +    CE CG PIP AR+   PG T CV+CQ
Sbjct: 2  DPFDRAQELEMEQREAAIAAARDLVGRG-VSATECEDCGTPIPPARQLAAPGCTRCVDCQ 60

Query: 63 AYQERQRK 70
            +ER R+
Sbjct: 61 NRRERPRR 68


>UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera araneosa HTCC2155
           RepID=A6DK24_9BACT
          Length = 147

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +      E + +  + +  ++++        C  C + IPEAR    P   LCV C+ 
Sbjct: 69  EINLNVMSDEGIKVQLVQQAIERLDEGKYGR--CVDCRDDIPEARLDAIPYAKLCVACKE 126

Query: 64  YQERQR 69
            +E Q 
Sbjct: 127 TRESQG 132


>UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LGY5_SYNFM
          Length = 257

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
                +  +  I+    KI        +CE+CG+ I   R +  P   LCV+C    E++
Sbjct: 56  LDANRKKEVEQIDLALGKIAIGEYG--ICESCGDDIALKRLEAIPWARLCVDCARDFEQR 113


>UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WW56_ALIAD
          Length = 213

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 13/78 (16%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  +  +             +  +     +I         CE+CG PIP  R + 
Sbjct: 47  HPADVASELALRNQAVGERLRDERALADVEDALSRIRQGTYG--QCESCGRPIPPDRLEA 104

Query: 52  FPGVTLCVECQAYQERQR 69
            P    CV+C+   E ++
Sbjct: 105 IPTTRRCVDCEREVEARQ 122


>UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n=2
           Tax=Betaproteobacteria RepID=A1K6D2_AZOSB
          Length = 135

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
             +  I   R++I        +C  CG  IP AR +  P  T CV CQ+  ER
Sbjct: 71  RELRDIEAARERIAEGEAG--ICVDCGEEIPFARLEAQPTATRCVRCQSLYER 121


>UniRef50_A9QS46 Putative conjugal transfer protein TraR n=1 Tax=Pseudomonas
          syringae RepID=A9QS46_PSESX
          Length = 68

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A    + L    + + R +I    +    CE C NPIPE RR    G   C+ 
Sbjct: 1  MADDIDRATEQAQYLLDVALFKHR-RIPTSLVSSQFCEDCDNPIPEPRRAAIVGCETCIH 59

Query: 61 CQAYQERQR 69
          CQ+ +E++R
Sbjct: 60 CQSLREQRR 68


>UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium petroleiphilum PM1
           RepID=A2SLK5_METPP
          Length = 122

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE D       Q  +  ++   Q++N        CE CG PI   R +  P    C++CQ
Sbjct: 55  DELDITLISHWQRELDEVSAALQRLNTGSYG--HCERCGEPIGLPRLRALPEARHCLDCQ 112

Query: 63  AYQER 67
              +R
Sbjct: 113 EQADR 117


>UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=3
           Tax=Propionibacterium acnes RepID=D1YA14_PROAC
          Length = 159

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 13/77 (16%)

Query: 3   DEADEAYSVTEQLTMTGINR-----------IRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D   S  E+     + R             Q ++        CE+CG PI +AR + 
Sbjct: 85  DTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDRGTWGT--CESCGEPIGKARLQA 142

Query: 52  FPGVTLCVECQAYQERQ 68
           FP  T+CV+C+  QER+
Sbjct: 143 FPRATMCVKCKQRQERR 159


>UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marine bacterium 311
           RepID=Q6SHS2_9BACT
          Length = 190

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D++D A               E+  +T I++  + ++ H     L   CG  I   R +
Sbjct: 107 ADDSDRATHEEGFTLEIKTRERERKLLTKIDQSVKGLSNHDYGFCLNPNCGVEIGIRRLE 166

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+  +E   K 
Sbjct: 167 ARPTARLCIDCKTLEEITEKQ 187


>UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter RepID=C5EYJ0_9HELI
          Length = 119

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M +  D          +  I R  +KI        +CE C  PI   R K  P    C+ 
Sbjct: 49  MKNTLDGLIFEHHHKELEYIERALEKIENGEYG--ICEMCDEPISIQRLKAKPHARFCII 106

Query: 61  CQAYQERQRKHY 72
           C+   E+  K  
Sbjct: 107 CREIVEKDLKGR 118


>UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus
          RepID=A8FE57_BACP2
          Length = 135

 Score = 63.2 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          ++     +      I+   +++        +CE  G  IP  R K  P     ++ +  +
Sbjct: 29 EQTLDQVDDQLEAEIDAALKRMEDGTYG--ICEKTGKEIPYERLKAVPYTRYSIDAKKNE 86

Query: 66 ERQR 69
          E  +
Sbjct: 87 ETTQ 90


>UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppressor protein homolog
           n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7S0_PSEFS
          Length = 138

 Score = 63.2 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
           E+     I     +I         C+  G PI   R    P  +   E Q   ER  KH
Sbjct: 76  ERAEAMAIKAALVRIEEDAYG--WCDDSGEPIGLKRLLNNPTASRTTEAQTRFERLGKH 132


>UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacteria
           RepID=Q2SLB9_HAHCH
          Length = 141

 Score = 63.2 bits (153), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D A               EQ  +  I +  ++I         C   G PI   R  
Sbjct: 60  SDENDRASREEQSAIALRIVDREQKLLPKIQQSLKRIRLGTYG--YCLESGEPIGIPRLL 117

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P    C E +A +E +  HY
Sbjct: 118 ARPTAEYCAEVKALKEIKEHHY 139


>UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family n=1 Tax=Treponema
           denticola RepID=Q73KX9_TREDE
          Length = 119

 Score = 63.2 bits (153), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 3   DEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D AD A   T++  +             I+   ++I         C  C   IPE R K 
Sbjct: 42  DFADLASYSTDRDMLEFIGENNVKKLQKIDSALERIREGKYGK--CITCKEQIPEDRLKA 99

Query: 52  FPGVTLCVECQAYQERQ 68
            P    C+ CQA  E++
Sbjct: 100 LPYALKCIHCQAKSEKK 116


>UniRef50_A6UZ55 Conserved domain protein n=2 Tax=Pseudomonas RepID=A6UZ55_PSEA7
          Length = 69

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A +   Q     +   + ++   G  +  C+ CG  IPEARR    G+  C  
Sbjct: 1  MADCFDRAQARELQDRELALQAHQVRVRPSGPSLTHCQECGEQIPEARR-ALGGIIRCTP 59

Query: 61 CQAYQERQRK 70
          CQA  E+  +
Sbjct: 60 CQARFEKGGR 69


>UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZKC1_PLALI
          Length = 152

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            +  E   +  INR    I      V  C+ C   IP AR +  P  T+CVECQ  QE
Sbjct: 58  LAALETRELMQINRALALIEEGHYGV--CQKCSKAIPLARLQAVPFTTVCVECQRRQE 113


>UniRef50_Q1AWF1 Transcriptional regulators, TraR/DksA family n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AWF1_RUBXD
          Length = 130

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D    +  +  +  + R  QKI      V  C+  G PIP+ R +  P     VE Q 
Sbjct: 63  EMDATVGLQTRRRLEDVERALQKIEEGTYGV--CDDTGEPIPKGRLEAMPEAIRTVEAQQ 120

Query: 64  YQERQRK 70
             +R R+
Sbjct: 121 RHDRVRR 127


>UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp.
          128-5-R1-1 RepID=A8V318_9AQUI
          Length = 133

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 19 GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           I+   ++I+        CE CG PI E R +  P  TLC E     E+
Sbjct: 52 KIDEALERISEGTYG--YCEVCGKPIEEERLEAIPWTTLCTEHAKEAEK 98


>UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 Tax=Rhodopirellula
           baltica RepID=Q7UEL7_RHOBA
          Length = 121

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            + +E   +  I    +++         CE CG  IP  R ++ P    CV CQ   E
Sbjct: 59  MAESESRELADIEEALERLRDGTFG--DCEDCGKSIPMNRLQVVPHARRCVRCQKASE 114


>UniRef50_C5B4E4 Putative uncharacterized protein n=1 Tax=Methylobacterium
          extorquens AM1 RepID=C5B4E4_METEA
          Length = 73

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 28/67 (41%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D    + E      +  IR +     +    C+ CG  IP  RR+  P    CV 
Sbjct: 1  MADDVDMIQHLDEMAMDGKLAAIRSRTETTDLAPEDCDDCGGDIPMERRRAAPWTRRCVR 60

Query: 61 CQAYQER 67
          CQ   ER
Sbjct: 61 CQTLAER 67


>UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=A0RK79_BACAH
          Length = 243

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 13/72 (18%)

Query: 3   DEADEAYSVTEQL-----------TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  + E+             +       QKI A      +CE  G  IP  R + 
Sbjct: 49  HPADMATELYEREKDFGLIELWHKQLEDTKHALQKIEAGTYG--ICEVSGEEIPFERLEA 106

Query: 52  FPGVTLCVECQA 63
            P  T C++   
Sbjct: 107 MPTATTCIQHAT 118


>UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26
           Tax=Alphaproteobacteria RepID=Q1GI88_SILST
          Length = 158

 Score = 62.8 bits (152), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A   T++                I+   ++I+        C+  G PI   R  
Sbjct: 76  PDVADRASEETDRALELRTRDRQRKLVAKIDAAIRRIDEGEYG--YCDVTGEPISLKRLD 133

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  T+ +E Q   ER+ K +
Sbjct: 134 ARPIATMSLEAQERHERREKVH 155


>UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396
           RepID=Q2SPR7_HAHCH
          Length = 107

 Score = 62.4 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+   A  V  ++ +  + +  Q++      V  C ACG  IPE+R ++ P   LCV C 
Sbjct: 46  DDVLNALKVETEIEINQVKKALQRLQQGEYGV--CVACGEDIPESRLQVLPFAELCVSCA 103

Query: 63  AYQE 66
           +  E
Sbjct: 104 SKSE 107


>UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 Tax=Aquificales
           RepID=C1DXT7_SULAA
          Length = 144

 Score = 62.4 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
             ++ T+  I+   +KI++      +CE CG  I E R +  P V LC++C   +E
Sbjct: 56  QADRETLYLIDLALRKIDSGIYG--ICEECGAVIGEKRLEAIPWVRLCIDCSQNEE 109


>UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1Q506_9BACT
          Length = 140

 Score = 62.4 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 10/74 (13%)

Query: 1   MSDEADEAYSVTEQLTMTG--------INRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   + Y     + +          I+   ++I        +CEAC   I   R K  
Sbjct: 65  MADVGTDNYERELMIELMQSGEDSVRSIDDALERIEEGTFG--ICEACEKKINRERLKAV 122

Query: 53  PGVTLCVECQAYQE 66
           P  +LCV CQ  +E
Sbjct: 123 PYASLCVNCQREEE 136


>UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 Tax=Aquificaceae
           RepID=B4U7Z4_HYDS0
          Length = 118

 Score = 62.4 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
           E   +  I     +I         CE CG  IP  R K  P  ++C+ C+  +E   
Sbjct: 62  ETKLLKKIEYTLARIENGTYG--YCEVCGAEIPYERLKARPVTSMCIRCKELEEENE 116


>UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 Tax=Elusimicrobium
           minutum Pei191 RepID=B2KE71_ELUMP
          Length = 258

 Score = 62.4 bits (151), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D A    ++  +             I    +KI+        CE C   +P+ R K 
Sbjct: 184 DPIDTATQSLDKEILFEQTDNSHTQIDQIESALRKIDKGIYGK--CENCRQLLPKKRIKA 241

Query: 52  FPGVTLCVECQAYQE 66
            P    CV CQ+ +E
Sbjct: 242 LPFARYCVVCQSSKE 256


>UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus
           oremlandii OhILAs RepID=A8MH72_ALKOO
          Length = 226

 Score = 62.0 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
               E+  +  I+   QKIN        C+ CGN I E R +I P    C++C   +
Sbjct: 67  LENHEKNRLLEIDDAVQKINEGTYGN--CQICGNKILEERLEIMPASITCIDCAEKE 121


>UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacter
           RepID=Q7VGT4_HELHP
          Length = 118

 Score = 62.0 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
           +  +  I    QKI      V  CE C + I   R K+ P    C+ C+   E+ +K
Sbjct: 61  KDEIKDIRNALQKIKDGTFGV--CEMCDDEIDVERLKVKPHAKYCINCRELFEQTQK 115


>UniRef50_A7N392 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC
          BAA-1116 RepID=A7N392_VIBHB
          Length = 72

 Score = 62.0 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINR--IRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          M D  D A  +  QLT   +     R K  A       C  CG+PIPEARR+   G   C
Sbjct: 1  MPDVIDHACDIEAQLTEVALANQLARAKPKASRESAQECGECGDPIPEARRQHMTGCQYC 60

Query: 59 VECQAYQERQRK 70
            CQ+  E+ ++
Sbjct: 61 THCQSDLEKMKR 72


>UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3
           Tax=Epsilonproteobacteria RepID=Q30RD2_SULDN
          Length = 116

 Score = 62.0 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A    ++  +  IN    KI        +CE C +PI   R K+ P    C++C+  
Sbjct: 54  IESAIVHQQEQELREINVTLGKIATGDYG--ICEMCEDPIGFQRLKVKPHAIYCIDCREI 111

Query: 65  QERQR 69
            E+ R
Sbjct: 112 VEKSR 116


>UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomycetales
           RepID=A4XDN2_SALTO
          Length = 139

 Score = 62.0 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   A S+ E+  +T + R  ++++  G     CE CGNPIP  R   FP  TLCV C+ 
Sbjct: 79  EISLANSILER--ITQVERALERLDEGGYG--WCERCGNPIPVERLAAFPSATLCVTCKQ 134

Query: 64  YQERQ 68
             ER+
Sbjct: 135 LAERR 139


>UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula
           staleyi DSM 6068 RepID=D2R5D7_9PLAN
          Length = 150

 Score = 62.0 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             E   +  I+R  +K+ A    +  C++CG PI   R +  P    C+EC    ER+ 
Sbjct: 60  EVESRELMQIDRAIEKMRAGRYGL--CDSCGGPIKLIRLQAVPYAIECIECARRDERRE 116


>UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Cupriavidus
           metallidurans CH34 RepID=Q1LEV8_RALME
          Length = 123

 Score = 62.0 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     ++ +  I   R ++        +C  C  PIP  R + +P    C  CQ   E+
Sbjct: 60  AMREHYRVELEDIAAARGRMTLGSY--AICRECEEPIPFERLQAYPTAKRCTACQREHEQ 117

Query: 68  QR 69
           +R
Sbjct: 118 KR 119


>UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4
           Tax=Hydrogenothermaceae RepID=B2V854_SULSY
          Length = 147

 Score = 62.0 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            S  E   +  I+   ++I        +CE CG  I E R +  P  TLC++    QE
Sbjct: 60  LSDVEIEILKAIDDTLERIQNGTYG--ICEVCGKEIEEERLEAVPWTTLCIQHAKEQE 115


>UniRef50_C4GGH6 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC
          51147 RepID=C4GGH6_9NEIS
          Length = 75

 Score = 62.0 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 35/73 (47%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MS + D+A  + E+     ++   ++          C+ CG+ IPEARR+   G   C+E
Sbjct: 1  MSRQIDQACELEERYRQAALDYQAKQNYPQRPSASHCQDCGDIIPEARRRAALGCQYCIE 60

Query: 61 CQAYQERQRKHYA 73
          CQ   E  +  YA
Sbjct: 61 CQERIEHAKAQYA 73


>UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9
           Tax=Campylobacterales RepID=A0RMM0_CAMFF
          Length = 122

 Score = 62.0 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 13/81 (16%)

Query: 2   SDEADEAY-----------SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D A            S  ++  +  I+   +KI        +C+ C + I   R K
Sbjct: 40  SDEFDFASINADAILEHSISAKQRSELNEIDESLKKIANRTYG--ICDMCEDEIDIERLK 97

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           + P    C+ C+   E+  K+
Sbjct: 98  VKPNAKYCITCREIIEKNNKN 118


>UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
           sp. JS666 RepID=Q12HC6_POLSJ
          Length = 130

 Score = 61.7 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             +Q  +  I + ++++         C  CG PIP  R K  P  + C+ CQ   E+ R
Sbjct: 66  QRDQEELRAIQQAQERMADGSYGG--CIDCGQPIPFERLKAQPSASRCIACQTRFEQGR 122


>UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum
           RepID=C6HWS3_9BACT
          Length = 121

 Score = 61.7 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A               E+  +  I+   ++I        +CE CG  I E R  
Sbjct: 38  PDPADLASVEEIQGFSYRLKEREKKLLRKIDEALERIEEGSFG--ICERCGEAIEEKRML 95

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  T C+ C+   E   +
Sbjct: 96  ARPVTTYCIACKTILEEAER 115


>UniRef50_B5EUP2 Zinc finger protein n=32 Tax=Proteobacteria RepID=B5EUP2_VIBFM
          Length = 89

 Score = 61.7 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              +   +  INR R  ++        C  CG  IPEARR I PGV LCVECQA ++ +
Sbjct: 12 QEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVELCVECQAKEDAR 71

Query: 69 RKHYA 73
           K ++
Sbjct: 72 EKAFS 76


>UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 Tax=Fibrobacter
           succinogenes subsp. succinogenes S85 RepID=C9RQK2_FIBSS
          Length = 157

 Score = 61.3 bits (148), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +  E   +  +    ++I      V  C+ CG  IP+AR    P  T CV C+ 
Sbjct: 67  ETNLSLAAREGKYLVYLEEALKRIKNGTFGV--CKICGQLIPKARLMAVPTATKCVNCKE 124

Query: 64  YQERQR 69
             +++ 
Sbjct: 125 ETKKKE 130


>UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbachia
           RepID=C0R4V6_WOLWR
          Length = 130

 Score = 61.3 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHY 72
           +     I    +KI         C+  G  I   R K  P    C+E Q   E+++  Y
Sbjct: 70  KDRKEKIKEALEKIKLGTYG--YCDGTGEEIGVERLKANPLAIYCIEEQERVEKEKNVY 126


>UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter
           thermophilus DSM 20745 RepID=D1C120_SPHTD
          Length = 130

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 13/78 (16%)

Query: 3   DEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
              D+A  V EQ  +             I R   K++        CE C  PIP  R + 
Sbjct: 50  HIGDQADVVYEQERLLSVRDRLADRKVLIERAITKMDQGEYG--YCENCKRPIPPDRLEA 107

Query: 52  FPGVTLCVECQAYQERQR 69
            P    C++CQA  +R++
Sbjct: 108 LPFARYCIDCQADMDRRQ 125


>UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 Tax=Kangiella
           koreensis DSM 16069 RepID=C7R8Q8_KANKD
          Length = 120

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M     EA    ++  +  + +  ++I         C  C  PI   R ++ P   LC++
Sbjct: 52  MDQAMSEASVERDKKRLVAVRKALKRIEEGQYG--FCLECDEPISAKRLEVAPETELCLD 109

Query: 61  CQAYQERQRK 70
           CQ+++E   +
Sbjct: 110 CQSFKEEHDR 119


>UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=10
           Tax=Gammaproteobacteria RepID=Q0A892_ALHEH
          Length = 149

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DE D A    E              +  I++  ++I         CE  G PI   R  
Sbjct: 68  PDEHDRATLEEEYQLELRIRERETRLLRKIDQALRRIETGEYG--YCEVTGEPIGIPRLL 125

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E +   E + +  
Sbjct: 126 ARPTATLSIEAKERAEVEERTR 147


>UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10
           Tax=Actinomycetales RepID=A6WCW5_KINRD
          Length = 159

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +       +  +    R   ++ +    V  CE+C  P+ +AR + FP VTLCV C++
Sbjct: 97  EHEMTIVNNARELLEQTQRALVRLGSGVYGV--CESCDGPVGKARLQAFPRVTLCVRCKS 154

Query: 64  YQERQ 68
             ER+
Sbjct: 155 RGERR 159


>UniRef50_A4JDG9 Transcriptional regulator, TraR/DksA family n=4
          Tax=Proteobacteria RepID=A4JDG9_BURVG
          Length = 77

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLC--EACGNPIPEARRKIFPGVTLCVE 60
          D+ D A  + EQ     I    + +++       C  EACG PIPE RR+   G   CVE
Sbjct: 2  DDFDHASDIEEQYRALAIAAATRPVHSAAESESFCQNEACGEPIPEERRRAVSGCRFCVE 61

Query: 61 CQAYQER-QRKHYA 73
          CQ  +E+   + YA
Sbjct: 62 CQERREQVLNRRYA 75


>UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=B4UII3_ANASK
          Length = 144

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             ++  +  I+    +I+A      +C  C   I   R    P   LC EC   +ER +
Sbjct: 78  ENQRRELVQIDAAIARIDAGEYG--ICRDCEQDIDPRRLAALPYAVLCTECAQRRERAQ 134


>UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WGI4_BACSK
          Length = 174

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           ++ +  +Q  +  I    ++I        +C   G PIP  R +  P      E Q  +E
Sbjct: 62  QSLNEADQKRLQDITEALERIEEGTYG--ICIDTGQPIPYERLEALPYAKRTPEAQREKE 119


>UniRef50_A4XQ42 Transcriptional regulator, TraR/DksA family n=11
          Tax=Proteobacteria RepID=A4XQ42_PSEMY
          Length = 88

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D      +      I R R ++      +  CE C   IPEARR+  PGV LCV+CQA  
Sbjct: 9  DAVQEQIDSSIEDAIARARSQLPKG-ESLRHCEECDAVIPEARRQAIPGVRLCVKCQAEH 67

Query: 66 ERQRKHYA 73
          +R+   Y+
Sbjct: 68 DRENAAYS 75


>UniRef50_Q2W8C2 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W8C2_MAGSA
          Length = 128

 Score = 60.5 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+ D A    E      +  +  ++        +C+ C +PI   R  + P    C  C 
Sbjct: 52  DDIDCAAERIEAFRDVALKAVLNRMT-GPRSSGICKTCYDPIEPQRIAVNPHARHCSFCA 110

Query: 63  AYQERQRKH 71
           A +E+ ++ 
Sbjct: 111 AEEEQAQRQ 119


>UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1
           Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571
           RepID=C6PE95_CLOTS
          Length = 207

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A    EQ  +  I+    ++        +C  C   I   R +  P  +LC  C  
Sbjct: 63  EKNYALKDNEQHVLRQIDDALLRMVKGQYG--ICNHCHKEIELDRLEALPYTSLCANCAK 120


>UniRef50_UPI0001AEFD73 hypothetical protein SghaA1_01734 n=1 Tax=Streptomyces ghanaensis
           ATCC 14672 RepID=UPI0001AEFD73
          Length = 111

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +D+         +  +T I+    +++        C+ CG  IP  R +I P    CV C
Sbjct: 49  ADDLLMMQKYAVRQALTDIDAAFTRLDEGTYGT--CQGCGRDIPVERLEILPYARCCVPC 106

Query: 62  QA 63
           Q 
Sbjct: 107 QQ 108


>UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter
           thermophilus DSM 20745 RepID=D1C5L2_SPHTD
          Length = 132

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 13/78 (16%)

Query: 2   SDEADEAYSVTEQL-----------TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +  AD A  + E              +  ++    ++      V  C  CG  I  AR K
Sbjct: 54  THIADAASDLLEAQTTVGALARIDAELAEVDAALDRLERGTYGV--CIDCGEMIDPARLK 111

Query: 51  IFPGVTLCVECQAYQERQ 68
             P  T C+ CQ + E +
Sbjct: 112 ALPTATRCLRCQTHFEYR 129


>UniRef50_Q2LQQ9 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus
          SB RepID=Q2LQQ9_SYNAS
          Length = 86

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 15/84 (17%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINA---------------HGIPVYLCEACGNPIPEA 47
          DE D A           +    ++ +                      +C  CG  I  A
Sbjct: 2  DEIDHAQQHEAMHREIALREHFRRRDNYSERGRNPGLHPKGAGPGERRICRDCGEEIQPA 61

Query: 48 RRKIFPGVTLCVECQAYQERQRKH 71
          R    P    C+ECQ  +ER+ +H
Sbjct: 62 RLAAMPFAVRCIECQGIKERRERH 85


>UniRef50_B6ICF8 TraR protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF8_ECOSE
          Length = 74

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE +   S    L    I RIRQ++   GI    C+ CG P+P  RR++ PGV  CV 
Sbjct: 1  MADEIERFQSHQAMLEADRIQRIRQQLT--GISALFCDDCGAPVPAERRRLIPGVRKCVG 58

Query: 61 CQAYQERQRKHY 72
          CQ  QE Q +HY
Sbjct: 59 CQEVQEIQARHY 70


>UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGP9_BDEBA
          Length = 126

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               ++  +  I R   KI         CE+C   I   R ++ P   LC++C   QE Q
Sbjct: 64  LHERDRTALYAIERALGKIADGTYG--QCESCSEIINARRLQVRPFTALCIDCMEEQESQ 121


>UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 Tax=Pseudomonas
           RepID=B1J6V4_PSEPW
          Length = 143

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               E+  +  I+   ++++        C+  G PI   R  + P  TL +E +  QER+
Sbjct: 79  LLEREKKLLDKIDEALERLSRGEYG--WCKETGEPIGLRRLLLRPTATLSIEAKERQERR 136

Query: 69  RKH 71
            +H
Sbjct: 137 ERH 139


>UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LMB8_SYNFM
          Length = 122

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 13/79 (16%)

Query: 3   DEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE D     TEQ  +             I    Q+I      V  CE CG  I   R K 
Sbjct: 42  DEVDRTSIRTEQEFLLHMHCRNERLVQEILNGLQRIRTGDFGV--CEECGKDIELNRLKA 99

Query: 52  FPGVTLCVECQAYQERQRK 70
            P  T C++C+   ER+ +
Sbjct: 100 HPSATQCIKCKKAAERKAR 118


>UniRef50_UPI0001826470 hypothetical protein EcanA3_08019 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001826470
          Length = 71

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A  + E      ++    +IN + +    CE CG  IPE RR   PG   C ECQ
Sbjct: 2  DIIDTAAEIEELQRNAALSAH--RINRNAVSAERCEECGEDIPEPRRAAVPGCQTCSECQ 59

Query: 63 AYQERQRKHY 72
          +  E + K  
Sbjct: 60 SVIELKNKQR 69


>UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RLG0_CLOCL
          Length = 199

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 6/64 (9%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ----A 63
           A    E   +  IN     +      +  C  C   I + R    P    C +CQ     
Sbjct: 66  ALKANETNMLGKINEALDALENGDYGL--CGNCQKEITKERLDFLPYAKYCAKCQGIMHT 123

Query: 64  YQER 67
            +ER
Sbjct: 124 LRER 127


>UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X580_DESRD
          Length = 115

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 1   MSDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           ++D AD+A   T++             +  + +   ++      +  CE CG  I   R 
Sbjct: 38  LADPADQATLSTDRQLALLRQQRLLHQLHEVEQALHQLANGEYGL--CEECGEEIGVPRL 95

Query: 50  KIFPGVTLCVECQAYQERQR 69
              P   LC+ECQ   ER  
Sbjct: 96  VACPSARLCIECQEQLERAA 115


>UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=38 Tax=Burkholderia
           RepID=A0AZX7_BURCH
          Length = 130

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A    +   +  I R +Q++         C  C   +   R    P    C  CQ+
Sbjct: 59  DVDHALIGMKLTELRAIGRAQQRMRDGSYG--ECIDCDGSVGYERLLARPTAERCTHCQS 116

Query: 64  YQERQ 68
             ER+
Sbjct: 117 LYERR 121


>UniRef50_C4LBC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Tolumonas
          auensis DSM 9187 RepID=C4LBC7_TOLAT
          Length = 76

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 28/73 (38%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSD  D A  + +Q     + R  + +    +    C  C  PIP  R         CVE
Sbjct: 1  MSDVVDRANDLVQQRLDDEMARRHRDVEKPLVIHRFCFDCEQPIPAERLASIQSAKRCVE 60

Query: 61 CQAYQERQRKHYA 73
          CQA  E Q    A
Sbjct: 61 CQALFEEQEAIRA 73


>UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=Bacillus pseudofirmus OF4
           RepID=UPI0001C4239D
          Length = 215

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E + A     +  +  IN+    I        +CE CG PIP  R +  P     +E
Sbjct: 62  ELEAALDQHSKDELEEINQALAAIEDGTYG--ICEVCGEPIPFERLEALPTARRRIE 116


>UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4 Tax=Geobacter
           RepID=Q39WX5_GEOMG
          Length = 130

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A +   +  +T ++    ++         C+ CG  I E R ++ P    C+ CQ  +E
Sbjct: 63  MAVADIRRQELTRMDEALGRLKEGRYG--FCDECGAEIDEGRLRVAPYAPCCISCQTRRE 120


>UniRef50_P41039 Uncharacterized protein ybiI n=135 Tax=Proteobacteria
          RepID=YBII_ECOLI
          Length = 88

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D             I R R +I      +  CE CG PIP+ARR+  PGV LC+ CQ  +
Sbjct: 9  DAVNEQINSTIEDAIARARGEIPRG-ESLDECEECGAPIPQARREAIPGVRLCIHCQQEK 67

Query: 66 ERQRKHYA 73
          + Q+  Y 
Sbjct: 68 DLQKPAYT 75


>UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM
           5159 RepID=B9KZU6_THERP
          Length = 133

 Score = 59.7 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D+    T +  +  +    ++I+       +C  C  PI   R +  P    CV  Q 
Sbjct: 63  EYDQTMLRTLEEELHEVLAALERIDQGTYG--ICVDCKRPIERERLEAVPWAVRCVADQE 120

Query: 64  YQERQ 68
             ER+
Sbjct: 121 RFERE 125


>UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Planctomyces maris DSM
           8797 RepID=A6C001_9PLAN
          Length = 141

 Score = 59.7 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            +  E   +  I R    I         CE+C   IP AR K  P    CV C   +E
Sbjct: 49  LAEIEYKELMQIRRAISLIQEGRYG--HCESCNKNIPIARLKAVPYAMFCVSCAEQRE 104


>UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231
           RepID=A4BMT6_9GAMM
          Length = 132

 Score = 59.7 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + + A        +  I    +K+         C  CG  I   R +  P V  C  CQ 
Sbjct: 61  DLNIAEIDRHVREIQRIEAALRKLADGSYG--YCMDCGEAIAAQRLQANPAVARCYACQT 118

Query: 64  YQERQR 69
             E++ 
Sbjct: 119 RFEQEE 124


>UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani
           RepID=Q3JAV6_NITOC
          Length = 132

 Score = 59.7 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A        +  I +   +         +C  C   I   R +I P V  C +CQ 
Sbjct: 61  DIDLAIVDLHIEEIRNIEQALMRFPKGNYG--ICIDCNTDIDYQRLQINPTVKRCFDCQT 118

Query: 64  YQERQRKHYA 73
             ER  +  A
Sbjct: 119 RHERTHREKA 128


>UniRef50_A9N2T0 Putative uncharacterized protein n=1 Tax=Salmonella enterica
          subsp. enterica serovar Paratyphi B str. SPB7
          RepID=A9N2T0_SALPB
          Length = 84

 Score = 59.4 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 37/68 (54%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          + A + T   T  GIN IR K+++      +CE CG  IP AR+   PGV LC  CQ  +
Sbjct: 8  EMAQASTAIFTQRGINAIRAKVHSLRPSKEICECCGADIPAARQLAVPGVELCAACQDVK 67

Query: 66 ERQRKHYA 73
          E+Q  H A
Sbjct: 68 EKQDVHRA 75


>UniRef50_B3B1J8 Conserved domain protein n=5 Tax=Gammaproteobacteria
          RepID=B3B1J8_ECO57
          Length = 75

 Score = 59.4 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINA--HGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D++D A +V E+ +   +     +           +C  CG  IP AR    P    CV 
Sbjct: 2  DDSDRAQAVMERGSERALCNRLTRKRQAVDTPGRRVCADCGGEIPAARLVAVPDAIRCVN 61

Query: 61 CQAYQERQ 68
          CQ   E +
Sbjct: 62 CQNIMEAR 69


>UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacteria RepID=DKSA_CAUCN
          Length = 142

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 13/72 (18%)

Query: 2   SDEADEAYSVTEQLTMTG-----------INRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A S T++                I++  +++         CE  G PI  AR +
Sbjct: 60  ADLADRASSETDRALELRTRDRQRKLISKIDQALRRVEDGSYG--YCEETGEPIGLARLE 117

Query: 51  IFPGVTLCVECQ 62
             P  T+ VE Q
Sbjct: 118 ARPTATMSVEAQ 129


>UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium
           ochraceum DSM 14365 RepID=D0LUD2_HALO1
          Length = 127

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               E   +  I+   +++ A    +  CE CG  I   R    P  TLC++C++ +E+ 
Sbjct: 60  LHDRETFLLNKIDAALERLKAGT--IDECEECGGEISVQRLIARPVTTLCIDCKSEREQS 117

Query: 69  RKHYA 73
            +   
Sbjct: 118 EEGRT 122


>UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromonosporaceae
           RepID=A4X6U9_SALTO
          Length = 132

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4   EADEAYSVTEQLTMT--GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           E D A S+   +            ++         CE CG  IP  R +IFP  T CV C
Sbjct: 66  ERDTAQSLLRTILDRRAQFEHALTRLEEGTYG--FCEGCGASIPVERLEIFPSATTCVTC 123

Query: 62  QAYQERQR 69
           +  +ER+ 
Sbjct: 124 KQTRERRA 131


>UniRef50_A1F607 Conserved domain protein n=3 Tax=Vibrio cholerae
          RepID=A1F607_VIBCH
          Length = 76

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRI--------RQKINAHGIPVYLCEACGNPIPEARRKIF 52
          MSD  D+A    ++     +N          +++ +        C +CG+ IP+ R +  
Sbjct: 1  MSDLFDKAQERDQEFLALALNNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQ 60

Query: 53 PGVTLCVECQAYQE 66
          P    CV CQ+ +E
Sbjct: 61 PEAVRCVSCQSRKE 74


>UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1JWV8_DESAC
          Length = 139

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHYA 73
             +  IN    +I         C   G  I   R   +P   L VE Q  +E + + +A
Sbjct: 79  RLLAQINAALLRIKEGSYG--YCVETGEEIGLRRLLAYPAAFLLVEVQEAREHRSRSFA 135


>UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium
           Ellin514 RepID=B9XD69_9BACT
          Length = 184

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+   +Q  +  I +  Q+I ++     +CE  G PI   R    
Sbjct: 77  MADAGTDTYDRDFALSMLSADQSAVYEIEQAIQRIESNTYG--ICEMTGKPIQSERLNAI 134

Query: 53  PGVTLCVECQAYQERQR 69
           P     VE +   ER  
Sbjct: 135 PWTRFSVEAERELERNG 151


>UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostridium
           RepID=Q182T9_CLOD6
          Length = 163

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
               E+  +  I+    KI        +C+ C N I   R  I P  +LC +C   +
Sbjct: 72  LINHEEGRLYQIDLALSKIENGTYG--ICDLCHNQIDLERLDILPDTSLCNDCAKKE 126


>UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 Tax=Thiomonas
           intermedia K12 RepID=C7HYG4_THIIN
          Length = 128

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D  + A +  +   +  I+   Q+++       +C  CG  I  AR      V  C  CQ
Sbjct: 56  DAVEIASTARDATELAAIDNALQRLD--TPDFGICIDCGADIEPARLLAESTVLRCTACQ 113

Query: 63  AYQERQ 68
              E Q
Sbjct: 114 QRFEHQ 119


>UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Herminiimonas
           arsenicoxydans RepID=A4G7K6_HERAR
          Length = 106

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
             + D+A    E + +  I    ++I+ H   +  C  CG  I  AR +  P    C +C
Sbjct: 40  PTDVDDAMIKMELVELADIEAAHRRIDNHQYGL--CIDCGCTIDYARLQASPTAKRCTQC 97

Query: 62  QAYQERQ 68
           Q   E++
Sbjct: 98  QRLHEQR 104


>UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1SGF0_9ACTO
          Length = 103

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
              T +  +    +  ++++     V  CE CG  IP AR +I P    CV CQ  +
Sbjct: 49  LIETARQGVADTAQALKRMSEGTYGV--CERCGQDIPTARLEILPSARFCVPCQQRR 103


>UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus
           metalliredigens QYMF RepID=A6TRY0_ALKMQ
          Length = 224

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
               E+  +T I+R  +KI         C+ CG  IP+ R ++ P   +C+ C 
Sbjct: 67  LENHERYRVTEIDRALEKIQEGTYG--ECQLCGQGIPDERLEVMPEANICMVCA 118


>UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13 Tax=Clostridium
           RepID=C6Q1P6_9CLOT
          Length = 201

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   A+   E   +  I      I+        C  CG  I E R +  P    CVECQ 
Sbjct: 61  ERGIAFKGNELSIIKKIENSLSNIDKGTYGK--CSICGKDIKEERLEFIPYTDHCVECQK 118


>UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromonas macleodii ATCC 27126
           RepID=UPI0001AEC064
          Length = 140

 Score = 58.6 bits (141), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 13/81 (16%)

Query: 3   DEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE D A    E           +  +  I++  ++I         C   G PI   R  I
Sbjct: 57  DEVDRAQYEEESRLSLRILDRERKLLPKIDKSLRRIKDKSFG--YCLETGEPIGIPRLLI 114

Query: 52  FPGVTLCVECQAYQERQRKHY 72
            P    C + +   E + +HY
Sbjct: 115 RPVSEYCADVKMVNEGREQHY 135


>UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LTL7_DESBD
          Length = 133

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 2   SDEADEAYSVTEQL-----------TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD+A S + +             +  I    + I+       +CE CG  I + R  
Sbjct: 41  PDLADQACSASSRDWNVIRYNRNVKLLKDITVALKAIDNDSYG--ICEMCGEHIADRRLL 98

Query: 51  IFPGVTLCVECQAYQER 67
             P    C+ECQ   +R
Sbjct: 99  AIPSALFCIECQEMIDR 115


>UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           salexigens DSM 2638 RepID=C6C0K2_DESAD
          Length = 116

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A  V E   +  +     +++       +CE CG  I  AR K  P    CV CQ+ 
Sbjct: 49  INLALHVRETKLIIDMEETLSRVDNWDFG--ICEDCGEEIALARIKANPTTRFCVSCQSR 106

Query: 65  QER 67
            E 
Sbjct: 107 MEE 109


>UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax=Cupriavidus
           RepID=Q473A0_RALEJ
          Length = 124

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     +  +  I   R+++ A       C  CG  IP +R + +P    C +CQ   ER
Sbjct: 60  AMLEHYRTELADIRAARERMKAGQYGT--CTDCGEAIPYSRLQAYPTARRCADCQRGHER 117


>UniRef50_A9ID32 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM
          12804 RepID=A9ID32_BORPD
          Length = 94

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPV--YLCEACGNPIPEARRKIFPGVTLCVECQA 63
          + A  + E      +  +R +++          C  CG+ I  AR  + PG   C++CQ 
Sbjct: 23 ELAARLAEDERAAALEAVRARMSQEVRGSADGNCLDCGDAIAPARLAVLPGAARCMDCQT 82

Query: 64 YQERQRKHYA 73
            E+Q+  +A
Sbjct: 83 AHEKQQTRHA 92


>UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA family protein n=1
           Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CE0
          Length = 253

 Score = 58.6 bits (141), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 20/64 (31%), Gaps = 2/64 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           S E D      E            +I+        C +CG  + E R    P V  CV C
Sbjct: 59  SQELDTTLLENETYLRDEAVAALGRIDDGTFGR--CTSCGGDVGEERLDALPYVRQCVAC 116

Query: 62  QAYQ 65
              +
Sbjct: 117 AQAE 120


>UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbinolicus DSM 2380
           RepID=Q3A5P4_PELCD
          Length = 127

 Score = 58.2 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHYA 73
           +  +  I+   +++         CEACG  I  AR +I P    C+ C+   E++ K  A
Sbjct: 63  REEILEIDEALERLRDGSYGR--CEACGKTIDIARLEILPFTRRCLTCRQEAEKEAKTKA 120


>UniRef50_Q48285 Haemophilus somnus cryptic prophage genes, capsid scaffolding
          protein n=1 Tax=Histophilus somni RepID=Q48285_HAESO
          Length = 76

 Score = 58.2 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A   TE +    I + +QK       V  C  C   IPE R+K   G   C++
Sbjct: 1  MTDQVDRANEYTEIMQQLAIQKHQQKTREKS-TVKYCLDCQEEIPEIRQKN--GYCRCID 57

Query: 61 CQAYQERQRKHY 72
          CQ   E+ ++ Y
Sbjct: 58 CQRIIEKHQRIY 69


>UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis
           HTCC2594 RepID=Q2NBT1_ERYLH
          Length = 104

 Score = 58.2 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DEA E      +  +  +     +I         C  CG PIP+ R +  P  T C++C 
Sbjct: 47  DEALEGVDDVLRAEIQQVRYALARIENGSYGT--CAKCGEPIPKERLEARPIATRCIKCA 104


>UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR family n=2
           Tax=Cystobacterineae RepID=Q1D0G7_MYXXD
          Length = 130

 Score = 58.2 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 19/46 (41%)

Query: 17  MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           +  + +   K+         CE CG+ IP  R +  P    CV CQ
Sbjct: 66  LARVLKALGKLRDDPDAFGECEECGDEIPLGRLRAMPYAEFCVTCQ 111


>UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangium cellulosum 'So
           ce 56' RepID=A9G9K0_SORC5
          Length = 167

 Score = 58.2 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 13/79 (16%)

Query: 3   DEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE DEA +             +   +  I+R   K+      +  CE  G PI   R K+
Sbjct: 86  DEMDEANAEGATSLTSKLLERDVRVLAEIDRALAKMKEGSYGM--CEGTGEPIGYRRLKL 143

Query: 52  FPGVTLCVECQAYQERQRK 70
            P     V  Q   ER+ +
Sbjct: 144 RPWARYSVAYQEQIEREER 162


>UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 Tax=Ralstonia
           RepID=B2UIX3_RALPJ
          Length = 120

 Score = 58.2 bits (140), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +  +  +N  R+++  H     +C  CG  IP  R +  P    C+ CQ   ER+
Sbjct: 66  RSELEQLNAARERMQQHSYG--ICVDCGEAIPFLRLQAQPTAMRCLPCQTACERR 118


>UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2
           Tax=Nitrosomonadaceae RepID=Q2YD37_NITMU
          Length = 131

 Score = 58.2 bits (140), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
             M  +    +++         C  CG  I   R  ++P    CV CQ   E+   H
Sbjct: 71  NEMREVEAALKRLADLDYG--DCIDCGGEIGFDRLMVYPTAQRCVRCQEVHEKTYMH 125


>UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1 Tax=Acidothermus
           cellulolyticus 11B RepID=A0LSA0_ACIC1
          Length = 113

 Score = 58.2 bits (140), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     Q     +    Q+I      +  C +CG P+PE R +  P    C+ CQA  E 
Sbjct: 54  ALLEVAQEQRRQVLEALQRIENGTYGL--CVSCGAPLPEGRLEAKPEAARCLSCQAKLEA 111

Query: 68  QR 69
            R
Sbjct: 112 GR 113


>UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID=Q1D808_MYXXD
          Length = 130

 Score = 57.8 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           ++D    +   +++  +  I+   ++++        C  CG  IP  R +  P    C E
Sbjct: 54  LADYTLSSLMESQRREIMLIDAALRRMDMGVFG--ECVDCGFEIPIERLEALPFAIRCEE 111

Query: 61  CQAYQERQRK 70
             +  E + +
Sbjct: 112 DASIHELETR 121


>UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family protein n=3
           Tax=Proteobacteria RepID=Q0AHN9_NITEC
          Length = 135

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           +  EA  + +   +  I     +I      +  C  CG P+   R   +P    C  CQ 
Sbjct: 64  DITEAEVIRDIGEVRDIVAAEDRIATGKYGL--CIDCGEPVRYKRLDAYPTAKRCFTCQV 121

Query: 64  YQER 67
            +ER
Sbjct: 122 RRER 125


>UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q02C95_SOLUE
          Length = 128

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +   +  +     ++ +      +C AC   I E R +  P    CV+CQ   
Sbjct: 64  DYRQLRMVEEALDRLESGDFG--ICLACDESIAEKRLQALPWARYCVKCQDEM 114


>UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 Tax=Exiguobacterium
           RepID=C4KZG3_EXISA
          Length = 183

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D+A +  ++  ++ +++    I         CE CG  I   R ++ P  TLC+E   
Sbjct: 57  ERDQALNELDEEFLSDVDKALLAIQNGTYGK--CEVCGKDIELDRLEVIPEATLCIEHAR 114


>UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q021L0_SOLUE
          Length = 129

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
               +   M G+    ++I        +C+ C   I   R ++ P  + C+ CQ   + 
Sbjct: 54  QLELDHKRMRGLRDALERIEDGSYG--ICQRCDEDISLKRLRVVPWASYCLRCQESADH 110


>UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 Tax=Chloroherpeton
           thalassium ATCC 35110 RepID=B3QWB1_CHLT3
          Length = 208

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 10/72 (13%)

Query: 1   MSDEADEAYSVTEQLT--------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   E     ++          ++ I++  ++I        +C   G PIP+AR +  
Sbjct: 138 MADHGTETMDREQRFLFISRDEKYLSYIDKALERIKNKTYG--ICAISGKPIPKARLEAV 195

Query: 53  PGVTLCVECQAY 64
           P   + +E +  
Sbjct: 196 PHTGVRIEYKKR 207


>UniRef50_A7ZJE9 Phage/conjugal plasmid C-4 type zinc finger protein, TraR family
          n=45 Tax=root RepID=A7ZJE9_ECO24
          Length = 73

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A  + E    T I    +++N   I    C  CG+PI E RR +  G   C  
Sbjct: 1  MADIIDSASEIEELQRNTAIK--MRRLNHQAISATHCCECGDPIDERRRLVVQGCRTCAS 58

Query: 61 CQAYQERQRKHY 72
          CQ   E   K  
Sbjct: 59 CQEDLELISKQR 70


>UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
           sp. JS666 RepID=Q12E87_POLSJ
          Length = 134

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHG----IPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A        +  +    ++++            C  CG  I   R    P    C  CQA
Sbjct: 63  AKVDHAAHELEQVLAALRRLDDATNGKSPGYGHCLDCGEAIDLRRLAALPATPYCTACQA 122

Query: 64  YQERQRK 70
             E +R+
Sbjct: 123 IHEHERQ 129


>UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudovibrio
           sp. JE062 RepID=B6R7R7_9RHOB
          Length = 118

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +A        +  I+   Q+I         C  CG  IPEAR ++ P    CV C    
Sbjct: 61  QANDRQRARELQRIDGALQRIKEEEYG--FCLECGEDIPEARLRVDPAALYCVSCAKLF 117


>UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1
           Tax=Geodermatophilus obscurus DSM 43160
           RepID=D2S7M9_9ACTO
          Length = 106

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M D      + +   T+  I    ++I A       C  CG+ +P  R +  P    CV 
Sbjct: 44  MPDLVTVNRAASLLRTIEEIEAALERIAAGTYGT--CVRCGSAVPAERLEFRPFAAACVS 101

Query: 61  CQAYQ 65
           CQ  +
Sbjct: 102 CQETR 106


>UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01U65_SOLUE
          Length = 129

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               E   +  +     ++      V  C  C   I   R    P    C++CQ   +R 
Sbjct: 54  NLDRESNLLRNVKGALVRVADGSYGV--CMHCEEDIKPKRLDAVPWTKYCIKCQEAADRH 111

Query: 69  R 69
            
Sbjct: 112 E 112


>UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 Tax=Proteobacteria
           RepID=A0LCU1_MAGSM
          Length = 155

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A   T           E+  +  I+R  + I         C  CG  I   R +
Sbjct: 67  ADPTDRASLETDRNFELRTRDRERKLIGKIDRTIRTIEEDEYG--FCSGCGVEIGLGRLQ 124

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC++C+  +E+  + +
Sbjct: 125 ARPVTDLCIDCKTKEEQMERVH 146


>UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD
          Length = 220

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 17/57 (29%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A           I +   ++        +CE  G  IP  R +  P     V 
Sbjct: 62  EKDIALYEQMSREYEEIKQALDRMENGTYG--ICERTGEQIPYERLEANPTARTTVA 116


>UniRef50_D0KGB6 Transcriptional regulator, TraR/DksA family n=1
          Tax=Pectobacterium wasabiae WPP163 RepID=D0KGB6_PECWW
          Length = 79

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 1  MSDEAD--EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MS + D   A + TEQL  + ++ I + ++   I    C+ACGN IPEARR   PGV LC
Sbjct: 1  MSHDLDDEMAMATTEQLLQSSLSLILRNVHNGRISNTCCDACGNEIPEARRLAVPGVELC 60

Query: 59 VECQAYQERQRK 70
          V CQ  +E   K
Sbjct: 61 VGCQEVEEHLTK 72


>UniRef50_Q8EDR9 C4-type zinc finger protein, DksA/TraR family n=1 Tax=Shewanella
          oneidensis RepID=Q8EDR9_SHEON
          Length = 71

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIR----QKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M D+ D A  V +Q     ++R R    ++ + +      C  CG  I   R    P   
Sbjct: 1  MIDQFDRAQEVEQQFRDNALSRQRKHKVEQPDINNKGERCCLDCGVVIEARRLVFMPTAV 60

Query: 57 LCVECQAYQER 67
           CVECQ  +ER
Sbjct: 61 RCVECQTAKER 71


>UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium tetani
           RepID=Q894D3_CLOTE
          Length = 210

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   A+   E   +  I    + I         C+ CG  I E R +  P    C+ECQ 
Sbjct: 61  ERGLAFKGNEINILNKIESSLESIEKGQYGN--CKNCGKRINEDRLEFIPYAENCIECQK 118

Query: 64  Y 64
            
Sbjct: 119 E 119


>UniRef50_Q9ZBS4 Putative uncharacterized protein SCO6164 n=4 Tax=Streptomyces
           RepID=Q9ZBS4_STRCO
          Length = 108

 Score = 57.4 bits (138), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+   A     +  +  I+    ++         C  CG P+P  R +I P    CV CQ
Sbjct: 46  DQLMSAQKAAIERVLKEIDEAFARVEEGTYGA--CLGCGKPVPGERLEILPYTRYCVACQ 103

Query: 63  AY 64
             
Sbjct: 104 RR 105


>UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9
           Tax=Gammaproteobacteria RepID=A8GD52_SERP5
          Length = 141

 Score = 57.4 bits (138), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEAD+A               E   +  I+    +++        C   G PI  AR  +
Sbjct: 59  DEADKAAREEDLRLLFRQLDRESRLLPKISAALTRLHNGEYG--YCRESGEPIGLARLLL 116

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P   L +E +  QE +  H
Sbjct: 117 RPTAELSIEAKTAQEMREPH 136


>UniRef50_Q9MC51 Orf77 n=1 Tax=Pseudomonas phage D3 RepID=Q9MC51_BPD3
          Length = 67

 Score = 57.4 bits (138), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A    E+     +     ++   G  +Y CE CG  IP ARR++ PGV  C+ CQ
Sbjct: 2  DIVDIANDYAERELAERL---YSRVKYVGESLYECEDCGEEIPVARRELVPGVRKCLSCQ 58

Query: 63 AYQER 67
           Y E 
Sbjct: 59 EYLEE 63


>UniRef50_C6BZJ9 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           salexigens DSM 2638 RepID=C6BZJ9_DESAD
          Length = 115

 Score = 57.0 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            +++     +  +  +     ++         CE CG  IP AR    P    CV C  +
Sbjct: 54  INKSSIAQSRQRILNLEDALNRLEKDSF-FGECEECGEDIPLARLLTLPESRYCVYCAEH 112

Query: 65  QER 67
            E 
Sbjct: 113 LEE 115


>UniRef50_B5TA71 Gp07 n=2 Tax=root RepID=B5TA71_9CAUD
          Length = 74

 Score = 57.0 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 4  EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
          E + A  + +      I   R + +  G     C  CG PIP ARR   P  T C ECQ 
Sbjct: 6  EFELAQQIEQMQRDVAIELARAQCH--GAGAEECVECGEPIPAARRACVPYATRCTECQG 63

Query: 64 YQERQRKHY 72
            E++R  Y
Sbjct: 64 RFEQRRTGY 72


>UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BN62_9GAMM
          Length = 122

 Score = 57.0 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     Q  +  I+   QKI+A       C+ACG  I  AR    P   LC+ CQ  QE+
Sbjct: 62  ANLAQCQERIRQIDEALQKIDAEDYG--YCDACGERIALARLNARPESPLCISCQEKQEQ 119


>UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Desulfovibrio
           vulgaris RepID=Q72G22_DESVH
          Length = 176

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +DE + A  + E              +  +    +++ A+   V  CE CG  IP AR K
Sbjct: 87  ADENEFASRLAEMALSVTLLHRAEHRIGLLENALRRLEAYDYGV--CEGCGEDIPVARLK 144

Query: 51  IFPGVTLCVECQAYQE 66
             P   LCV CQ   E
Sbjct: 145 ASPATRLCVFCQQESE 160


>UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9B2U1_HERA2
          Length = 117

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           E + A     Q  +  +     +I+       +C   G  IP  R ++ P   L +E  
Sbjct: 59  EKNFALIEDRQRLIGEVEAALDRIDHGTYG--ICLKTGKQIPIERLEVLPYAALSIEAA 115


>UniRef50_D1U4E4 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
          aespoeensis Aspo-2 RepID=D1U4E4_9DELT
          Length = 66

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D  +   E      ++    +  A       C  CG PIPE RR   PGVTLCV 
Sbjct: 1  MPDFCDMGHEAEELARKAALSMAGTR-RADAPSRETCAECGAPIPEPRRVAVPGVTLCVA 59

Query: 61 CQAYQER 67
          CQA +E 
Sbjct: 60 CQAAKEE 66


>UniRef50_Q52PP5 Putative uncharacterized protein n=1 Tax=Xanthomonas phage Xp15
          RepID=Q52PP5_9CAUD
          Length = 77

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVY-LCEACGNPIPEARRKIFPGVTLCVE 60
          +DE+D A  + E      I ++ +        V   C  C   IP+ R     G   C+ 
Sbjct: 5  TDESDLASKLEELAKEDAIQKVLRDGKVPSDWVSPDCYDCDQEIPKDRLAT--GAFRCIH 62

Query: 61 CQAYQERQRKHY 72
          CQ   E  +++Y
Sbjct: 63 CQTKFEFNQRNY 74


>UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus
           asiaticus 5a2 RepID=B3ES66_AMOA5
          Length = 138

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
             E      +     +IN        CE  G+PI   R   FP      E Q  ++
Sbjct: 81  QNEDFLKREVEDALYRINLGTYG--YCEETGDPIGVRRLLAFPMARYTTEVQKQKD 134


>UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea
           34H RepID=Q48AS1_COLP3
          Length = 104

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
               +L ++ +    ++I         C  C  PI   R    P  T C++C 
Sbjct: 53  HHEAKLELSLVKSALKRITEGLYGS--CVECEEPINPDRLSALPYTTKCIKCA 103


>UniRef50_B7V4J8 Repressor, PtrB n=8 Tax=Pseudomonas RepID=B7V4J8_PSEA8
          Length = 66

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A  +        +    +   A       CE CG PIP+ARR+  PG + C++
Sbjct: 1  MADLADHANELVLARLDGLL--AARPALAIRESAEDCEDCGEPIPQARRRAAPGCSRCID 58

Query: 61 CQAYQERQ 68
          CQ   ER+
Sbjct: 59 CQDRHERR 66


>UniRef50_B0TKU6 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella
          halifaxensis HAW-EB4 RepID=B0TKU6_SHEHH
          Length = 68

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 31/67 (46%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          DE DE+  V  +     +     K+         C  CG  IPE RR+   GV LC++CQ
Sbjct: 2  DEGDESVRVQARALNQYLAGRATKLLVAKASASYCARCGEDIPEPRRQAVKGVQLCIDCQ 61

Query: 63 AYQERQR 69
             ER++
Sbjct: 62 TLSERKQ 68


>UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=D2B0C3_STRRD
          Length = 110

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A  V+ +  +  + +  + +         C+ CG  IP  R K  P    C+ CQ   E
Sbjct: 51  LADIVSAERNLAVVRQALRDVTELTYGR--CDGCGLAIPFERLKARPLARFCMLCQRRHE 108

Query: 67  RQ 68
            +
Sbjct: 109 SR 110


>UniRef50_A4TVR6 DnaK suppressor protein n=3 Tax=Magnetospirillum
          RepID=A4TVR6_9PROT
          Length = 76

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D+ D A    +      +  +  +  +      +C ACG  I   R +  P    C EC 
Sbjct: 2  DDIDCAAERIDAFNAVALQAVLAR-TSGAPSSGICRACGCDIEPERLRATPHARHCKECA 60

Query: 63 AYQERQRKHY 72
          A  E + + +
Sbjct: 61 AEIEAENRRH 70


>UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3
           Tax=Anaeromyxobacter RepID=B8J655_ANAD2
          Length = 122

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMT-----------GINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A +   +                +     +++A       C +CG PI  AR +
Sbjct: 43  PDPNDRATAEERRNWALRLRDRDRRLLGKVQAALARLDAGTFGT--CTSCGAPISAARLR 100

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC+ C+   ER  +  
Sbjct: 101 ARPVTDLCIACKTEAERVERPR 122


>UniRef50_UPI0001C31ADF transcriptional regulator, TraR/DksA family n=1 Tax=Conexibacter
           woesei DSM 14684 RepID=UPI0001C31ADF
          Length = 115

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E DE  +      +  I R  Q++        +    G PIP+AR +  P     V  QA
Sbjct: 52  ERDEGLAEQLHEQLAAIARAEQRVADGTYGRSI--DSGEPIPDARLEAVPWAERTVAEQA 109

Query: 64  YQERQR 69
             ER R
Sbjct: 110 AYERGR 115


>UniRef50_C9R760 Putative uncharacterized protein n=1 Tax=Aggregatibacter
          actinomycetemcomitans D11S-1 RepID=C9R760_AGGAD
          Length = 72

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTM--TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          M+D  D+     E +           Q+          C  CG  I  +R K  P    C
Sbjct: 1  MNDIVDKTQQRQEIMWANWRKQQVSAQQFAVAMNTARYCIDCGVLIHPSRVKAMPHCVRC 60

Query: 59 VECQAYQERQRK 70
          + CQ   E  +K
Sbjct: 61 ISCQQLHEESQK 72


>UniRef50_Q9ZXI6 Orf39 n=3 Tax=root RepID=Q9ZXI6_9CAUD
          Length = 68

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D+A    E +    +   ++           CE CG  IPEARR+  PG   C+ CQ
Sbjct: 2  DVIDQANERAENMVQAAL--AQRTNTRLAPSALWCEDCGEQIPEARRQAAPGCECCISCQ 59

Query: 63 AYQERQRKH 71
            +E   + 
Sbjct: 60 ELREHPARR 68


>UniRef50_P44221 Uncharacterized protein HI1497 n=3 Tax=Haemophilus
          RepID=Y1497_HAEIN
          Length = 75

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQ------KINAHGIPVYLCEACGNPIPEARRKIFPG 54
          M+D  D+     E L    +           +++A       C  CG PIP  R +  P 
Sbjct: 1  MADVLDQLNEREEALLQNILAPHLDTELSDDEVDAIAEAGRQCSECGLPIPTTRLRANPF 60

Query: 55 VTLCVECQAYQERQR 69
             CV CQ   E  R
Sbjct: 61 AHRCVSCQQDWEEGR 75


>UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=A7HEW6_ANADF
          Length = 130

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 23/56 (41%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +   +  I+R   K+ +      LCE C   I   R  + P  T C  CQA  E +
Sbjct: 63  QAELVARIDRALAKLASAPEDFGLCEDCEEEIAPGRLAVMPYATRCPACQAKTEPR 118


>UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepID=A3IED4_9BACI
          Length = 150

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 18/61 (29%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           + A           I    Q +         C  CG  IP  R +  P    CVE    +
Sbjct: 55  EMAIDEHRGDNAEEIKEALQAMADGTYG--ECTVCGKEIPIGRLEAMPQALTCVEHAEKK 112

Query: 66  E 66
           E
Sbjct: 113 E 113


>UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QJK4_DESAH
          Length = 114

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            +EA     ++T++ + R   +I        LC AC  PIP AR  I P   LCV+C 
Sbjct: 54  MNEAALKRARITLSKLERALARI--GSPDFGLCSACEEPIPFARLMILPETELCVKCA 109


>UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6FZV7_9DELT
          Length = 130

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M+     + +      +  I      I+       +CE C  PI   R ++ P V++CV+
Sbjct: 49  MTQSIASSRNRERAQKLAAIREALLLIDEDPEEYGMCEDCEEPIKRRRLELMPWVSVCVQ 108

Query: 61  CQAYQERQRK 70
           CQ  +ER  +
Sbjct: 109 CQEKRERDGR 118


>UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Poribacteria sp. WGA-A3 RepID=D2MJ83_9BACT
          Length = 123

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   +           I+     +        +C  C   I E R  + P   LCVECQ 
Sbjct: 51  EMGISLQEKRNRERQMIDEALVSLEEGTYG--ICVECNTEISEKRLAVMPFARLCVECQE 108

Query: 64  YQERQRK 70
             E   K
Sbjct: 109 KIELLEK 115


>UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           vulgaris str. 'Miyazaki F' RepID=B8DLC7_DESVM
          Length = 119

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            +  +    ++++        C+ CGN IP AR    P  T CV C + +E +   
Sbjct: 60  RLQVLRATLERLDDEDFG--YCDDCGNEIPAARLLAVPTTTRCVHCMSAREERGAQ 113


>UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           aespoeensis Aspo-2 RepID=D1UB56_9DELT
          Length = 116

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A        +       +++         C+ CG+PI  AR K  P   LC+ CQ+ 
Sbjct: 49  VNLAMQRRRMARIKEYECAIKRLRETDYGT--CDECGDPIGLARLKANPSARLCIVCQSA 106

Query: 65  QERQRKHY 72
            E +    
Sbjct: 107 AEEEDHAR 114


>UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bacteroidetes
           RepID=Q11YT2_CYTH3
          Length = 259

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           A++  +Q  +  +     +I        +C   G  IP+ R K+ P     +E +  +
Sbjct: 203 AFAARQQKFILQLENAYARIQNGTYG--ICIVTGKLIPKERLKLVPHTQHTIEAKEQR 258


>UniRef50_Q602X1 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus
          RepID=Q602X1_METCA
          Length = 91

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 16/86 (18%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYL----------CEACGN------PI 44
          M D AD +    E   + GI  +   +      V +          C  C N      PI
Sbjct: 1  MPDLADLSDERIEIERVAGIRAVLDSMRPDTPQVVIPGEDGLPMVVCYDCLNEYEVITPI 60

Query: 45 PEARRKIFPGVTLCVECQAYQERQRK 70
          P  R         C++CQ   ER+ K
Sbjct: 61 PPERLAANEHAIRCIDCQIEHEREAK 86


>UniRef50_C5S4P2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae
          RepID=C5S4P2_9PAST
          Length = 77

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 8/74 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQ------KINAHGIPVYLCEACGNPIPEARRKIFPG 54
          MSD+ D      EQL    +    +      +I    +    C  CG PIP  R +  P 
Sbjct: 1  MSDDVDRIMEQDEQLLSLQLAPHLENQLSDDEIEQIALSGRDCIECGLPIPIQRLRAVPF 60

Query: 55 VTLCV--ECQAYQE 66
             C+   CQ   E
Sbjct: 61 AVRCICCCCQQDYE 74


>UniRef50_A4XZG1 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudomonas
          mendocina ymp RepID=A4XZG1_PSEMY
          Length = 72

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPG--VTLC 58
          M+D  D A           +      +         CE CG+PIP  R +         C
Sbjct: 1  MADAVDIANDRMLDELDRRLANHA--LARQCPVAEECEDCGDPIPFERVQALAKLPCLRC 58

Query: 59 VECQAYQERQR 69
          VECQ Y ER+ 
Sbjct: 59 VECQGYHERKG 69


>UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 Tax=Desulfovibrio
           vulgaris RepID=A1VGY3_DESVV
          Length = 113

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           T +  + G+    +++         C  CG  IP AR    P  + CV C  
Sbjct: 62  TARKRLAGLEYAVKRLGDDDPEYGYCVECGEAIPFARLMSMPEASRCVNCAE 113


>UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3
           Tax=Anaeromyxobacter RepID=Q2IQL4_ANADE
          Length = 139

 Score = 55.5 bits (133), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +  +  I+   ++I         C ACG P+   R +  P    C+ C
Sbjct: 86  RRELAEIDAALERIQQGRYGT--CLACGGPMGLQRLRAIPEARYCIAC 131


>UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2
           Tax=Gammaproteobacteria RepID=B8GMT5_THISH
          Length = 132

 Score = 55.5 bits (133), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
             +  +     +I        +C  CG+ I   R   +P    C  CQA  E+
Sbjct: 72  EEVRDVEAALLRIAGQSYG--ICTDCGDAIAYERLDAYPTAKRCARCQAQHEK 122


>UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 Tax=Moraxellaceae
           RepID=A5WFD1_PSYWF
          Length = 109

 Score = 55.5 bits (133), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
             V  Q ++T +N    +I+        C  CG  I + R +  P  TLC++  +
Sbjct: 57  LLVEAQQSLTYVNNALSRIDNGTYG--ECTVCGEDIEDKRLEAVPYATLCMQHAS 109


>UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobium
           RepID=Q1MI46_RHIL3
          Length = 107

 Score = 55.5 bits (133), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 2/63 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE            +  I+    ++N        C  C N I + R    P    C++C 
Sbjct: 46  DEVLREMQAEGHNQIAAIDAAIGRLNDDTYGK--CVKCHNRIGKERLTAVPYTPFCIDCA 103

Query: 63  AYQ 65
              
Sbjct: 104 KSF 106


>UniRef50_A1B365 Transcriptional regulator, TraR/DksA family n=35
          Tax=Proteobacteria RepID=A1B365_PARDP
          Length = 91

 Score = 55.5 bits (133), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINA--HGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
          D      E  T   I R+R +            CE C  PIPEARR+  PGV LCV+CQ+
Sbjct: 9  DAVNEQIEVSTQEAIERMRLRNAQRGDRESAAFCEECDEPIPEARRRAIPGVRLCVDCQS 68

Query: 64 YQERQRK 70
           ++R  +
Sbjct: 69 GRDRAWR 75


>UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella
           woodyi ATCC 51908 RepID=B1KG10_SHEWM
          Length = 115

 Score = 55.1 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 13/69 (18%)

Query: 3   DEADEAYS-----------VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D A              +++  ++ I R   ++      +  CE  G PI   R  +
Sbjct: 49  DAVDLASQIAAQRAAHSVLESQRQQLSEIERAMARLKVGTYGL--CEQTGEPIGFERLAV 106

Query: 52  FPGVTLCVE 60
            P     V 
Sbjct: 107 LPWARHTVT 115


>UniRef50_Q0EWC9 Putative uncharacterized protein n=1 Tax=Mariprofundus
          ferrooxydans PV-1 RepID=Q0EWC9_9PROT
          Length = 73

 Score = 55.1 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINA----HGIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D  D      E      ++R+R +             +C  C   IP AR    P   
Sbjct: 1  MADPCDMGSEREEISRQEALDRVRYRPLEAPLLDEEYRRICRDCECLIPSARLAAVPHAV 60

Query: 57 LCVECQAYQE 66
           C  CQ   E
Sbjct: 61 RCASCQEEHE 70


>UniRef50_B6YQN7 DnaK suppressor protein n=1 Tax=Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2 RepID=B6YQN7_AZOPC
          Length = 125

 Score = 55.1 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 10/67 (14%)

Query: 8   AYSVTEQLTMTG--------INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           A S  E   +          +    ++I        +C   G  IP+ R +  P  TL +
Sbjct: 61  ALSREETNRLAQRQLQFMQSLKAALKRIENKTYG--ICRITGELIPKKRLRAVPHSTLSI 118

Query: 60  ECQAYQE 66
           E +  +E
Sbjct: 119 EAKKKKE 125


>UniRef50_B2I3M6 Putative uncharacterized protein n=3 Tax=Acinetobacter
          RepID=B2I3M6_ACIBC
          Length = 66

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D+A    + L    I     +    G     C  CG  IP  RR+   GV  C+E
Sbjct: 1  MTDLIDKAQESADYLLQQEIAN---RCRFEGESEKECVECGEEIP-ERRRALGGVKFCIE 56

Query: 61 CQAYQERQRK 70
          CQ   ER+R+
Sbjct: 57 CQTKLERKRR 66


>UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2
           Tax=Streptosporangineae RepID=D1ACI4_THECD
          Length = 121

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +++AD A     +   + +    Q+I A       C  CG PI   R +  P    C+ C
Sbjct: 56  AEQADAALERLRRQRNSVLA-ALQRIAAGTYGR--CVTCGKPIAAGRLEARPDAARCLTC 112

Query: 62  QAYQERQRK 70
           QA  +R R+
Sbjct: 113 QARYDRARR 121


>UniRef50_Q8H9Q7 ORF8 n=1 Tax=Vibrio phage VHML RepID=Q8H9Q7_9CAUD
          Length = 75

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          +D  D A ++++      ++RI+      G+  + C  CG+ IP+ RR++  GVT CV+C
Sbjct: 6  ADPLDRAAALSQAHLEVSLSRIK---KFEGVSAHECVECGSEIPKKRRELLQGVTDCVDC 62

Query: 62 QAYQERQRKHY 72
           A +E   K+Y
Sbjct: 63 AAIKETLSKNY 73


>UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           aespoeensis Aspo-2 RepID=D1U5V5_9DELT
          Length = 111

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A     ++ +  +    ++++       LC  C  PIP AR K  P    CV+C  
Sbjct: 57  AQLSKTRVRLARLGEALRRVDDD-EDFGLCIDCSKPIPMARLKAMPETQYCVDCAE 111


>UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 Tax=Bacteroidetes
           RepID=C7PES3_CHIPD
          Length = 348

 Score = 54.7 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            +  +   +  + +   +I        +C   G  I +AR +  P  TL +E +
Sbjct: 292 MASRQIQFIDHLEKALVRIENKTYG--ICRVTGKLIDKARLRAVPHATLSIEAK 343


>UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 Tax=Citreicella sp.
           SE45 RepID=D0D572_9RHOB
          Length = 130

 Score = 54.7 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E+   + Q  +  I    ++++        C  CG  I EAR  I P   LC  C 
Sbjct: 68  DEVLESLGTSGQAEIGRIEAALRRMDEGEYG--YCLTCGEAISEARLDILPDAPLCAACA 125


>UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 Tax=Rhodobacterales
           RepID=A1B0I3_PARDP
          Length = 106

 Score = 54.7 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  +A     Q  +  I+   ++I++       C  CG+ I  AR  + P   LC  C 
Sbjct: 46  DEVLQALGHAHQAELNRIDAALRRIDSGDYG--FCAGCGDVILPARLDLLPDTPLCAHCA 103

Query: 63  A 63
           A
Sbjct: 104 A 104


>UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinomycetales
           RepID=A4F8B9_SACEN
          Length = 125

 Score = 54.7 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +      +  +  ++R   +++     +  CE CG+PI   R +  P  T C+ C  ++
Sbjct: 68  QGLLADARRDLEALDRAAARLDDGTYGL--CERCGSPIAPERLEALPATTTCIACATHR 124


>UniRef50_A4NCL4 Putative uncharacterized protein n=1 Tax=Haemophilus influenzae
          3655 RepID=A4NCL4_HAEIN
          Length = 78

 Score = 54.7 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIR------QKINAHGIPVYLCEACGNPIPEARRKIFPG 54
          M+D  D+      Q+        R      + I         C+ CG  IP+AR    P 
Sbjct: 1  MTDILDQLVERESQIEALQQAARRINPLSAEAIQQIAEDGRNCDECGELIPKARLLAQPF 60

Query: 55 VTLCVECQAYQERQRKH 71
             CV+CQA  E+  K 
Sbjct: 61 ARCCVDCQALLEKTNKR 77


>UniRef50_Q1VTU7 General stress protein, DnaK suppressor DskA n=1 Tax=Psychroflexus
           torquis ATCC 700755 RepID=Q1VTU7_9FLAO
          Length = 127

 Score = 54.7 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 22  RIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           R   KI      +  C+ C   IP AR +I PG   CV C
Sbjct: 82  RAMDKIEEGTYGL--CDVCKKEIPRARLEIVPGALSCVVC 119


>UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WFI4_BACSK
          Length = 207

 Score = 54.3 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D+A     +  +  +    +K N       +CE  G  IP  R + +P     VE   
Sbjct: 53  EKDQAVHNHIKDELHEVEHALEKFNDGSYG--ICEKTGKAIPYERLEAYPAARTVVEESR 110

Query: 64  YQER 67
             E 
Sbjct: 111 PFEE 114


>UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17
           RepID=A3JJC9_9ALTE
          Length = 111

 Score = 54.3 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           +A  V     +  I     +I+        C  CG PI   R ++ P    C+ C  
Sbjct: 57  QAGKVRADRQLRLIEAALLRIDNDEYG--DCRECGEPINPKRLEVDPTSLYCIHCAR 111


>UniRef50_UPI000190AE5D hypothetical protein Salmoneentericaenterica_13393 n=2
          Tax=Salmonella enterica subsp. enterica serovar Typhi
          RepID=UPI000190AE5D
          Length = 75

 Score = 54.3 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)

Query: 1  MSDEADEAYSVTEQL-----TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGV 55
          MS + D++ +  E           I    +      +    C  CG+ IP++RR+  PGV
Sbjct: 1  MSIDVDDSMAQNESQVNIDNRFAEIRAALR--IKGHVSRRHCRDCGDEIPDSRRESIPGV 58

Query: 56 TLCVECQAYQERQRK 70
          +LC+ CQ ++E   K
Sbjct: 59 SLCMYCQEWRESGDK 73


>UniRef50_Q3Z6R5 DnaK suppressor protein, putative n=5 Tax=Dehalococcoides
           RepID=Q3Z6R5_DEHE1
          Length = 123

 Score = 54.3 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            A        +        K +     +  CE C  PI  AR +  P   LC++C++ 
Sbjct: 63  LAMEKKLLDQIAETEYALDKYDRGVYGL--CEMCKEPIDPARLEALPQARLCMQCKSK 118


>UniRef50_B0V602 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
          AYE RepID=B0V602_ACIBY
          Length = 72

 Score = 54.3 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A  +  +          Q  +     +  CE CGN IP  R++ +  VTLCVE
Sbjct: 7  MTDKIDIAQELQLKQVQ------IQPKDFSRPSLTECEECGNDIPIERQR-YGSVTLCVE 59

Query: 61 CQAYQERQRKHY 72
          C+  QE+  K Y
Sbjct: 60 CKNTQEKLSKRY 71


>UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes
           RepID=Q7MQQ3_WOLSU
          Length = 113

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
             +  +  +  +     +I++      +C+ C  PIP  R    P  T+CV+C   +
Sbjct: 58  LLLDLEARLKKLEYALTRIDSPDFG--ICQICDEPIPYKRLFALPEATICVDCANER 112


>UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus halophilus
           RepID=A1DZZ7_SPOHA
          Length = 227

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
           E D A     +  ++ I     ++ A      +CE  G PIP  R + FP   
Sbjct: 60  EKDIALLGHLKEELSDIEYSLNQMKAGKYG--ICEKTGKPIPNERLEAFPTAR 110


>UniRef50_C8N773 TraR/DksA family transcriptional regulator n=1
          Tax=Cardiobacterium hominis ATCC 15826
          RepID=C8N773_9GAMM
          Length = 69

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D AD+A  + E           ++          CE CG+PIPEARR+ +P  T C ECQ
Sbjct: 2  DIADKAAEIEEMNRAQA--LAARRRIPAAPGCAECEDCGDPIPEARRRAYPSATRCTECQ 59

Query: 63 AYQERQRKHY 72
          A  ER  K+ 
Sbjct: 60 ARHERHAKNR 69


>UniRef50_A5EYQ4 DksA-like zinc finger domain containing protein n=8 Tax=root
          RepID=A5EYQ4_VIBC3
          Length = 69

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI--PVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D  D+A     +     +   R +            C  C +PIP+ R++   G   C  
Sbjct: 2  DVIDDAAKTEAKFQQMALANHRARAMQTAYLPSRTHCLECDDPIPKERQEKVKGCQYCTP 61

Query: 61 CQAYQERQ 68
          CQA +E++
Sbjct: 62 CQAAKEQR 69


>UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 Tax=Micrococcineae
           RepID=D1C0D4_XYLCX
          Length = 157

 Score = 54.0 bits (129), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +       +  +       ++I A       CE  G PI +AR + FP  TL VE +A
Sbjct: 95  EQELTLVNNMRDLLAQTKHAIERIKAGTYAT--CEMTGLPIGKARLQAFPRATLSVEAKA 152

Query: 64  YQERQ 68
            +ER+
Sbjct: 153 REERR 157


>UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 Tax=Variovorax
           paradoxus S110 RepID=C5CLF2_VARPS
          Length = 130

 Score = 54.0 bits (129), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A    +   +  I   R+++         C  CG  IP  R +  P    C+ECQ   ER
Sbjct: 61  AEVERDVSELRDIEAARERLRTGEFGT--CIDCGVQIPLDRLEAMPASARCLECQQRHER 118


>UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1
           Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPY8_THISH
          Length = 114

 Score = 54.0 bits (129), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           A     +  +  ++   +++N       +C ACG  IPEAR KI P   LC  C + QE
Sbjct: 56  ALGNEARRELARVHEALKRMNEGEYG--ICAACGEAIPEARLKILPQARLCAACASRQE 112


>UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4
           Tax=Hydrogenothermaceae RepID=B2V8G8_SULSY
          Length = 118

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 13/69 (18%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +DE + A + T           E+  +  I +  QKI        +CE+CG  IP  R K
Sbjct: 40  ADEMERAEAETSRILTLRNLDRERKLLKRIEQTLQKIEYGVYG--ICESCGAEIPYERLK 97

Query: 51  IFPGVTLCV 59
           + P  +LC+
Sbjct: 98  VRPIASLCI 106


>UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesiocystis pacifica
           SIR-1 RepID=A6FXL2_9DELT
          Length = 132

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 13/78 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A               ++  +  +     ++        +CE    PIP  R ++
Sbjct: 44  DVEDQAAEEAGRFQAKQLLTRDRARLAEVEAALSRVAEGEYG--ICEESDEPIPFRRLEL 101

Query: 52  FPGVTLCVECQAYQERQR 69
            P     V  Q   E + 
Sbjct: 102 EPTTRYTVAAQEALEAEG 119


>UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 Tax=Desulfovibrio
           vulgaris RepID=A1VFA5_DESVV
          Length = 118

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A     +  +  +     + +        C+ CG+ I   R    P   LC+ C   +E
Sbjct: 55  RANIEQLKGRLRSLRTALARTDDEEFG--WCDECGDAIGVQRLLSVPTTRLCIACARRRE 112


>UniRef50_B7J8S5 Putative uncharacterized protein n=1 Tax=Acidithiobacillus
          ferrooxidans ATCC 23270 RepID=B7J8S5_ACIF2
          Length = 104

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQ------KINAHGIPVYLCEACGNPIPEARRKIFPGV 55
          SD  D A  + EQ     ++  RQ      K +        C  C + IP  R +     
Sbjct: 6  SDILDIAADLAEQERAWRVSVARQAMQASEKPDEDVAGNRYCLDCADVIPPERVQAVQ-A 64

Query: 56 TLCVECQAYQERQR 69
            CV C   +E++ 
Sbjct: 65 VRCVVCAGIREKKA 78


>UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobium etli CFN 42
           RepID=Q2K1F6_RHIEC
          Length = 106

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+         +  +  I+   +++N        C  C +PI   R +  P    CV C 
Sbjct: 45  DQVLMEMRKEAREQIISIDAALERLNHGSFGR--CVRCLDPIDPGRLEAIPYTPYCVTCA 102

Query: 63  A 63
            
Sbjct: 103 R 103


>UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 Tax=Streptomyces
           RepID=C9NIY3_9ACTO
          Length = 131

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
                +  +  ++R  +++         CE C  PIP  R ++ P  T CV C A
Sbjct: 75  LLARARDHLAEVDRALERLERGDYGR--CERCREPIPPGRLEVRPAATTCVRCAA 127


>UniRef50_B7WXU2 Transcriptional regulator, TraR/DksA family n=1 Tax=Comamonas
          testosteroni KF-1 RepID=B7WXU2_COMTE
          Length = 76

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKI----NAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D  D A +   QL    +    ++              C ACG  IPEARRK  PG  
Sbjct: 1  MTDFFDRAQARELQLREDALRDQTRRAGLSGKTEADSATEC-ACGALIPEARRKAVPGCQ 59

Query: 57 LCVECQAYQERQR 69
           CV+C++ QER++
Sbjct: 60 RCVKCESAQERKK 72


>UniRef50_A8R990 Putative uncharacterized protein n=2 Tax=unclassified T4-like
          viruses RepID=A8R990_9CAUD
          Length = 85

 Score = 53.2 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 24/59 (40%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
              E +    I   R+++         C  C   IPEARR+   GV  C+ CQ+  + 
Sbjct: 12 QLEMEAVVQAAIVHARKQVAVERESAKYCFDCDEEIPEARRQAIKGVIYCIGCQSMHDE 70


>UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter keddieii DSM 10542
           RepID=D1BG79_SANKS
          Length = 129

 Score = 53.2 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           L +  ++    +I A       C  CG PI   R +  P   LC++C  
Sbjct: 79  LQLEEVDGALARIAAGTYGT--CTRCGRPISAGRLEARPSAPLCIDCAR 125


>UniRef50_C4WG44 Transcriptional regulator, TraR/DksA family n=1 Tax=Ochrobactrum
          intermedium LMG 3301 RepID=C4WG44_9RHIZ
          Length = 76

 Score = 53.2 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          + A    EQ    GI   R  +         C  CG+ I   RR   P    CV+CQ   
Sbjct: 9  ELADMRAEQERDAGIAAARAPLKQT--GTLDCIRCGDEIEAERRAALPSARRCVDCQESF 66

Query: 66 ERQRKHY 72
          ER +   
Sbjct: 67 ERWQATR 73


>UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=Oceanobacillus
           iheyensis RepID=Q8ENZ4_OCEIH
          Length = 116

 Score = 53.2 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D   ++  +  +  I    QKI      +   E  G PIPE R ++ P   L V  + 
Sbjct: 55  QRDAGLNLMRENQLKEIEDALQKIEDGTYGIS--EKSGEPIPEERLEVLPTARLLVSEEE 112

Query: 64  Y 64
            
Sbjct: 113 E 113


>UniRef50_B6EIS7 Probable rRNA transcription initiatior protein,putative phage
          gene n=1 Tax=Aliivibrio salmonicida LFI1238
          RepID=B6EIS7_ALISL
          Length = 71

 Score = 53.2 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI--PVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D  D A ++  + T   +     K            C  C   IP+AR++   G   CV 
Sbjct: 2  DAFDRASALEAKQTEVALANHMAKQKNKVEIKSAEECIECEKAIPKARQEAVKGCQYCVN 61

Query: 61 CQAYQERQR 69
          CQ   ++ +
Sbjct: 62 CQELADKGK 70


>UniRef50_A1SCC2 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614
           RepID=A1SCC2_NOCSJ
          Length = 127

 Score = 53.2 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D  + A+    +  +  +   R ++      V  C  C  PI   R +  P  T C++C 
Sbjct: 68  DPVEAAHRAAVEQIVDEVVTARHRLTVGLYGV--CTGCEEPIATERLEFRPWATTCIKCS 125

Query: 63  AY 64
             
Sbjct: 126 QR 127


>UniRef50_A1SED9 Putative DnaK suppressor protein n=1 Tax=Nocardioides sp. JS614
          RepID=A1SED9_NOCSJ
          Length = 92

 Score = 53.2 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          D          + T+  I+  R +++        C  CG  IP  R +  P    CV C
Sbjct: 33 DPVVAVQRGALKQTIAEIDAARGRLSDGTFGT--CTGCGGAIPADRLEFRPWAGTCVSC 89


>UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1 Tax=Syntrophomonas
           wolfei subsp. wolfei str. Goettingen RepID=Q0AYC5_SYNWW
          Length = 147

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVTEQL-----------TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
             AD A  VT++             +  +N    ++      V  CEACG  I  AR + 
Sbjct: 42  HPADIASEVTQRETNLGILEMLEYELEKVNDALSRLQNGQYGV--CEACGQKIEPARLER 99

Query: 52  FPGVTLCVECQAYQERQRKH 71
               TLC  C   Q++  K 
Sbjct: 100 LVNTTLCTNCARSQQKGFKR 119


>UniRef50_A3EVE8 Putative uncharacterized protein n=1 Tax=Leptospirillum rubarum
          RepID=A3EVE8_9BACT
          Length = 52

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 25 QKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHY 72
           ++   G     C  CG  IP  RR++ PGV  C+ CQ  +ER    Y
Sbjct: 4  SRLQPKGDSALFCSDCGGVIPVKRRELVPGVKTCILCQKERERSSMEY 51


>UniRef50_A3HVW0 DnaK suppressor protein, putative n=2 Tax=Bacteroidetes
           RepID=A3HVW0_9SPHI
          Length = 127

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 17/65 (26%), Gaps = 6/65 (9%)

Query: 2   SDEADEAYSVTEQLTMTG----INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           +D  +                 +     +I      V  C   G  I + R K  P    
Sbjct: 61  ADTLERESQSQLAARQQKFIINLENALVRIKNGTYGV--CVDTGKLISKERLKAVPHTMH 118

Query: 58  CVECQ 62
            +E +
Sbjct: 119 SIEAK 123


>UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 Tax=Micrococcineae
           RepID=B8H9G6_ARTCA
          Length = 118

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 2/57 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           A        +  +     +I         C  CG PI E R +  P    C++  A 
Sbjct: 61  ALLNQSSAGLDQVEAALTRIADGTYGS--CAVCGRPIAEGRLEARPWTPYCIDHAAA 115


>UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BI57_9GAMM
          Length = 123

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 22  RIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
              ++I+        C  CG  I  +R +  P  + C+ CQ+  E + +
Sbjct: 74  AALKRIDEGDFG--FCLDCGEEIELSRLRACPTASRCIRCQSVLEAEVR 120


>UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11 Tax=Chlorobiaceae
           RepID=B3ELW2_CHLPB
          Length = 147

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 10/71 (14%)

Query: 1   MSDEADEAYSVTEQLT--------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   E     ++          +  I++  ++I      V  C   G PIP+ R +  
Sbjct: 74  MADHGTETMDREQRFMFIARDEKYLGYIDQALERIRNKTYGV--CAKSGKPIPKKRLEAV 131

Query: 53  PGVTLCVECQA 63
           P  ++ +E + 
Sbjct: 132 PHTSVRIEFKE 142


>UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium
           ochraceum DSM 14365 RepID=D0LJW3_HALO1
          Length = 142

 Score = 52.4 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DE D+A     Q             +  + R  QK+      V  CE  G PI   R  
Sbjct: 63  PDEGDQASQNANQAYLLRYADKQNKQLQQVRRALQKLQTGEYGV--CEGSGEPIGVQRLM 120

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
           + P     VE +   +R+R+H 
Sbjct: 121 LRPWTRYSVEYKEQIDRERRHR 142


>UniRef50_Q06424 Uncharacterized 8.2 kDa protein in gpA 5'region n=21 Tax=root
          RepID=YO82_BPP2
          Length = 74

 Score = 52.4 bits (125), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D       +L    IN    ++   G    +CE C  PIP ARR  +P  T CV 
Sbjct: 1  MPDNVDFIQEQQAELLERQINAA--RVKHCGASALVCEECDAPIPAARRAAYPSATRCVS 58

Query: 61 CQAYQERQRKHY 72
          CQ+  E + KHY
Sbjct: 59 CQSVFEAKNKHY 70


>UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           vulgaris str. 'Miyazaki F' RepID=B8DQJ2_DESVM
          Length = 142

 Score = 52.4 bits (125), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 13/76 (17%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +DE + A  V+E              +  I  + + +++    V  C+ACG+ IP  R  
Sbjct: 53  ADENEFASRVSELTLSMTLLDRAGRRIREIEGVLRAMDSRDYGV--CDACGDDIPLPRLL 110

Query: 51  IFPGVTLCVECQAYQE 66
             P   LCV CQ  QE
Sbjct: 111 ARPTTRLCVHCQMEQE 126


>UniRef50_B0ZSI9 Putative uncharacterized protein n=1 Tax=Halomonas phage phiHAP-1
          RepID=B0ZSI9_9CAUD
          Length = 75

 Score = 52.0 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINR--IRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MSD AD A     +L      R    Q           C  CG  I   RRK  P    C
Sbjct: 1  MSDVADIAGEEQARLEEERAARWAREQAARESQAGSEYCVECGFDIDPRRRKAMPSAIRC 60

Query: 59 VECQAYQERQRKHY 72
            CQ + +R  K Y
Sbjct: 61 FGCQEFVDRTAKGY 74


>UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 Tax=Rhizobiaceae
           RepID=A6U730_SINMW
          Length = 114

 Score = 52.0 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           SDE  E   +  Q  +  I+    +I A      +C  CG+ I   R +  P   LC  C
Sbjct: 48  SDEVLEGLGLAGQGEIRAIDAALNRIEAGTFG--ICARCGDAISPERLRAVPHAPLCQTC 105

Query: 62  QAY 64
            A 
Sbjct: 106 AAE 108


>UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 Tax=Shewanella
           RepID=B1KFH6_SHEWM
          Length = 131

 Score = 52.0 bits (124), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 3/61 (4%)

Query: 9   YSVTEQLTMTGINRIRQKINA---HGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
                Q +   + +   +I            C  CG PI   R  I P   +C+ CQ+  
Sbjct: 69  QQEMAQASEVLMQQHIVRIKQIFLDTDEYGFCLECGEPIGLGRLTIHPTAEMCIGCQSEA 128

Query: 66  E 66
           E
Sbjct: 129 E 129


>UniRef50_Q2WA51 DnaK suppressor protein n=1 Tax=Magnetospirillum magneticum AMB-1
          RepID=Q2WA51_MAGSA
          Length = 74

 Score = 52.0 bits (124), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 26/71 (36%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A    E      +   R +    G   Y C +CG  IP+ RR   PG   C  
Sbjct: 1  MADLADLAKEREEANREAALAAFRARARPTGESAYFCRSCGERIPDERRAAVPGTNHCTF 60

Query: 61 CQAYQERQRKH 71
          C         H
Sbjct: 61 CAQQITAASPH 71


>UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X5B5_DESRD
          Length = 112

 Score = 52.0 bits (124), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           +  +  + +  ++++A      LC  CG  I   R    P   +C+ C  
Sbjct: 63  KHRLARLEQALKRLDADDPEYGLCVECGEEIALKRLLALPESEVCIHCAE 112


>UniRef50_Q144T3 Transcriptional regulators, TraR/DksA family n=2 Tax=Burkholderia
           RepID=Q144T3_BURXL
          Length = 126

 Score = 51.6 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E  +A     +  +  I R  QKI      +   +  G PIP+AR +  P     VE Q+
Sbjct: 63  EVSQALRDVNEHRIADIQRALQKIEQGTYGLS--DESGLPIPKARLEATPEAIFTVEEQS 120

Query: 64  YQE 66
            +E
Sbjct: 121 RRE 123


>UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=Rhizobium etli GR56
           RepID=UPI00019074B1
          Length = 128

 Score = 51.6 bits (123), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+            +  I+   +++         C  C  PI  AR    P    C  C 
Sbjct: 62  DQVLMEMRREAGAQIQLIDAALERLKHGTFGR--CVTCLAPIETARLDAIPYTPYCATCA 119

Query: 63  AYQERQR 69
              + +R
Sbjct: 120 RLADERR 126


>UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. GAI101
           RepID=B7RRT7_9RHOB
          Length = 107

 Score = 51.3 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E+  +  Q  +  +NR   +I        +C+ CG+ I + R +      LC  C 
Sbjct: 47  DEVLESLGLAAQKEIMLLNRAITRIENGSYG--ICKKCGDQISKERLEAVLYTQLCKRCA 104

Query: 63  A 63
           A
Sbjct: 105 A 105


>UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales RepID=A3X4N5_9RHOB
          Length = 104

 Score = 51.3 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E   + E   +  I+    ++         C+ CG+ I   R  + P    C  C 
Sbjct: 46  DEVLETLGLNELEEVRQIDAALARLVEGSYG--YCQICGDEIAAKRLDLVPATPFCSGCA 103

Query: 63  A 63
           +
Sbjct: 104 S 104


>UniRef50_B9JYG7 DnaK suppressor protein n=2 Tax=Agrobacterium vitis S4
          RepID=B9JYG7_AGRVS
          Length = 72

 Score = 51.3 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 5  ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           + A    EQ     +   R  +         C  CG  IP+ARR  +P    C +CQ  
Sbjct: 7  FELAEERIEQERDAKVAAARADLKKA--GATECLDCGRAIPQARRFAYPSAIRCFDCQVS 64

Query: 65 QERQ 68
           ER+
Sbjct: 65 IERE 68


>UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes RepID=D0JAK5_BLASB
          Length = 131

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
              Q  +  +N    ++        +C      IP+ R    P  TL +E +   E++ K
Sbjct: 74  EHLQKFINSLNAALIRVENKDYG--ICRITKKLIPKGRLMAVPHTTLSIEGKKLVEKRNK 131


>UniRef50_B8J2D3 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774
           RepID=B8J2D3_DESDA
          Length = 130

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 9/77 (11%)

Query: 2   SDEADEAYSVTEQLTMTGINRI-RQKINAHG--------IPVYLCEACGNPIPEARRKIF 52
           SDEAD A  +          R   Q+I+                C  CG  IP  R    
Sbjct: 34  SDEADAASHMEAAYIACCRARRSVQRIHDLERLLHLLRHNGPRQCVDCGEDIPLKRLVAA 93

Query: 53  PGVTLCVECQAYQERQR 69
           PG   C  CQ  +ER  
Sbjct: 94  PGTVRCFSCQQQEERAA 110


>UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50 Tax=Bacteroidetes
           RepID=A5FM28_FLAJ1
          Length = 126

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           MS EA+   ++ ++  +  +     ++        +C+  G  I + R KI P  T+ +E
Sbjct: 63  MSKEANSQLAIRQEKFIRDLKNALFRVENKTYG--ICKVTGKLISKERLKIVPHATMSIE 120

Query: 61  CQAYQ 65
            +  Q
Sbjct: 121 AKNLQ 125


>UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
           RepID=C9YVQ5_STRSW
          Length = 132

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
              T +  +  I+    ++  H      C  C  PIP  R +I P    CV C+ 
Sbjct: 77  QRDTIERVLKEIDAAFVRVQEHTYGT--CLGCSKPIPVERLEILPYTRFCVPCRR 129


>UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFB9_DESAH
          Length = 177

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
              +  +    ++I+        C   GN I   R ++ P  TL VE Q   ER
Sbjct: 77  HKKLKQVMLALERIDEGNFG--YCLLSGNRIGLNRLEVLPWATLAVETQEMLER 128


>UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6QA93_SULNB
          Length = 116

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 2/54 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           D      ++  +        KI        +CE  G  IP  R +  P     V
Sbjct: 59  DNTLLKRQEDELKETQHALTKIKNGTYG--ICEKTGKSIPVERLEANPIARYVV 110


>UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 Tax=Pelobacter
           propionicus DSM 2379 RepID=A1ATM0_PELPD
          Length = 145

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A S             E+  +  I+    +I      +         IP  R K 
Sbjct: 46  DIYDQASSERDRELGLLLGDREREKLHAIDEALLRIREGEYGICEECE--EEIPLGRLKA 103

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P    CV C++  E+ +  
Sbjct: 104 LPFARHCVRCKSDLEKLQAQ 123


>UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 Tax=Beutenbergia
           cavernae DSM 12333 RepID=C5C3L5_BEUC1
          Length = 111

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           A   + +     ++    +I      V  CE CG PIP AR ++ P    CV C
Sbjct: 59  ALIASAEHEREELDAALARIEDGTHGV--CERCGRPIPAARLEVRPAARTCVGC 110


>UniRef50_Q1GXR9 Transcriptional regulators, TraR/DksA family n=1
          Tax=Methylobacillus flagellatus KT RepID=Q1GXR9_METFK
          Length = 72

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D A  +  +    GI   + +    G     C+ CG  I + RR    GV  C+ CQ   
Sbjct: 5  DWAQEMELREREAGIAEKQLQALRSGPGYSHCKDCGEEIEKERR-AIKGVKRCIFCQERY 63

Query: 66 ER 67
          ER
Sbjct: 64 ER 65


>UniRef50_C6NRK8 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus
          ATCC 51756 RepID=C6NRK8_9GAMM
          Length = 72

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%)

Query: 7  EAYSVTEQLTMTGINRIR----QKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           A  + ++     + R+R    ++ +        C  CG P P  R         CV C 
Sbjct: 1  MAAELEQRYRELALARLRALPSEEPDEDANGNRFCLDCGEPTPADRVAAV-HAVRCVTCA 59

Query: 63 AYQERQRKHYA 73
            +ER  +  A
Sbjct: 60 TRRERLARQRA 70


>UniRef50_A7HD49 Transcriptional regulator, TraR/DksA family n=1
          Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HD49_ANADF
          Length = 102

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 10 SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          S   +  +  I+    +I         C  CG P+   R +  P    C+ C
Sbjct: 45 SELARRELADIDDALLRIQEGCYG--CCLNCGGPLGLQRLRAIPEARYCLAC 94


>UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 Tax=Rhodothermaceae
           RepID=D0MD16_RHOM4
          Length = 149

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 10/70 (14%)

Query: 1   MSDEADEAYSVT--------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   +A            +Q  ++ ++R  ++I        +C+  G PIP  R +  
Sbjct: 78  MADAGTDAMEREKLFLMIARQQKYISHLDRALERIKNKTYG--ICKVTGKPIPRERLEAV 135

Query: 53  PGVTLCVECQ 62
           P   + +E +
Sbjct: 136 PHTEVSIEAK 145


>UniRef50_A0YAF5 DnaK suppressor protein n=1 Tax=marine gamma proteobacterium
           HTCC2143 RepID=A0YAF5_9GAMM
          Length = 106

 Score = 49.3 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 21/64 (32%), Gaps = 5/64 (7%)

Query: 4   EADEAYSVTEQLTMTGINR---IRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E DE      + T   I       +KI+        C  CG  I   R K  P    CV 
Sbjct: 44  ENDEVLEEIGRETSLAIQEIRSALEKIDNKTYGK--CSNCGEAINPIRLKAIPETIHCVS 101

Query: 61  CQAY 64
           C + 
Sbjct: 102 CASK 105


>UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Psychromonas ingrahamii 37 RepID=A1SZ57_PSYIN
          Length = 115

 Score = 49.3 bits (117), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + +  +++        +C  C   I   R +I P    C++C  
Sbjct: 70  VEQALKRLEKQIYG--ICVDCDEDINVHRLEIDPTAIRCIKCAQ 111


>UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LT72_DESBD
          Length = 110

 Score = 49.3 bits (117), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + T+  + R   +++     V  C  CG  I   R  + P  TLCV+C  
Sbjct: 63  RRTLMRLERALDRVDDEHFGV--CAECGEDIAVGRLLVMPEATLCVDCAE 110


>UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata
           D2 RepID=A4CBE2_9GAMM
          Length = 103

 Score = 49.3 bits (117), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+         +  +  +N+  + ++     V  C+ C   I  AR +  P    C++C 
Sbjct: 46  DQVLNTIRNEAKSELQLVNQAIENLHQGHYGV--CQQCLKAIAPARLEALPYTQTCIDCA 103


>UniRef50_B1FBH2 Transcriptional regulator, TraR/DksA family n=1 Tax=Burkholderia
           ambifaria IOP40-10 RepID=B1FBH2_9BURK
          Length = 127

 Score = 49.3 bits (117), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           A++A        +  I R  +KI+         +  G+ IP  R +  P     V+ ++ 
Sbjct: 64  ANQALRNVNARRIADIQRALEKIDDGTYGYS--DESGDLIPVGRLEAVPEAVYTVDEESR 121

Query: 65  QERQR 69
           +E  R
Sbjct: 122 RESGR 126


>UniRef50_Q1QXM4 Transcriptional regulators, TraR/DksA family n=3
           Tax=Gammaproteobacteria RepID=Q1QXM4_CHRSD
          Length = 106

 Score = 49.0 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
                +  +  + R   +++        CE CG  I   R +  P  T C  C   
Sbjct: 53  LEDEARTELAQVERALARLDTGV--GDHCEICGGLIAPERLEALPYTTRCKACADR 106


>UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 Tax=Nakamurella
           multipartita DSM 44233 RepID=C8XJQ6_NAKMY
          Length = 117

 Score = 49.0 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
                Q  +  ++     ++A      +CE CG  I   R    P  T CV C   +
Sbjct: 63  MHRAAQQRVRDVDEALAALDAGRYG--ICERCGCAIAAGRLAALPTATRCVSCAGRR 117


>UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax=Streptomyces
           viridochromogenes DSM 40736 RepID=UPI0001B515E7
          Length = 118

 Score = 49.0 bits (116), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 2   SDEADE---AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
            DEA++   A   T +  +  I+    ++      V  C+ C   IP  R +I P    C
Sbjct: 53  PDEAEQLMSAQRDTIERVLKEIDAAFARVQDRSYGV--CQGCSTRIPVERLEILPYTRFC 110

Query: 59  VECQA 63
           V CQ 
Sbjct: 111 VPCQR 115


>UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gammaproteobacteria
           RepID=A4A689_9GAMM
          Length = 106

 Score = 49.0 bits (116), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  +A  V  +  +  +     ++      V  C  CG  I  AR +  P  T C+ C 
Sbjct: 48  DEVVDAIGVETREAIVALKAALLRMEEGSYGV--CVECGGTIAAARLEARPEATHCINCA 105


>UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SL94_9BACT
          Length = 113

 Score = 49.0 bits (116), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
               +++ +  +     +I      +  C  C   IPE R KI P  T+C++C   Q
Sbjct: 58  NLRNKRMRLQRLEAALLRIARGSFGL--CSVCEEDIPEKRLKIAPESTVCMDCMREQ 112


>UniRef50_Q6U9H2 Putative uncharacterized protein n=2 Tax=unclassified T4-like
          viruses RepID=Q6U9H2_9CAUD
          Length = 84

 Score = 49.0 bits (116), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 18 TGINRIRQKINAHGI---PVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           G++     I +          CE C  PIPEARR        CV+CQ   +
Sbjct: 17 AGLDNALDFIRSTQYKGDTPEFCEECDEPIPEARRMAISTA-YCVQCQTVHD 67


>UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax=Proteobacteria
           RepID=Q1NSE5_9DELT
          Length = 116

 Score = 48.6 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           +A S      +  I    ++I +       C  C + I + R +  P V  C++C    E
Sbjct: 57  QAASRLTSQELQRIQAAFKRIESGDYG--YCVVCQDEISQGRLRFDPSVLTCIDCARNAE 114

Query: 67  RQ 68
            +
Sbjct: 115 TK 116


>UniRef50_C6XZU8 DnaK suppressor protein n=4 Tax=Bacteroidetes RepID=C6XZU8_PEDHD
          Length = 126

 Score = 48.6 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            +  ++  +  +     +I        +C   G  I + R +  P  TL +E +
Sbjct: 71  LAARQKKFIENLEAALVRIENKTYG--ICRETGKLIQKERLRAVPHATLSMEAK 122


>UniRef50_A4XRJ7 Transcriptional regulator, TraR/DksA family n=8
           Tax=Pseudomonadaceae RepID=A4XRJ7_PSEMY
          Length = 103

 Score = 48.6 bits (115), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D A++A                +L +  +N+   ++      +  C  CG PI EAR  
Sbjct: 31  PDFAEQAQQRQNDEVLEALLAEAELGLALVNQALARVADGSYGL--CLKCGEPISEARLN 88

Query: 51  IFPGVTLCVECQAYQ 65
             P    C+ C + +
Sbjct: 89  AIPAAEYCLGCASVR 103


>UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3
           Tax=Alphaproteobacteria RepID=Q2GBE3_NOVAD
          Length = 104

 Score = 48.2 bits (114), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D + E+ ++  +  +  ++R  ++I A       C  CG  I  AR +  P   LC++C 
Sbjct: 43  DASLESQALLLRRQIASVDRALERIAAGTYG--ECIRCGGEIAPARLEARPEAALCIDCA 100

Query: 63  AYQ 65
             +
Sbjct: 101 RQE 103


>UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Saccharopolyspora
          erythraea NRRL 2338 RepID=A4FJQ8_SACEN
          Length = 56

 Score = 48.2 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
               +  +  I     ++      +  C ACG+ IP       P  TLC+ CQ 
Sbjct: 1  MMRGARRALADIEVALARMRDGMYGL--CRACGSDIPLQLLTAIPKTTLCLSCQR 53


>UniRef50_D1VL44 Transcriptional regulator, TraR/DksA family n=3 Tax=Actinomycetales
           RepID=D1VL44_9ACTO
          Length = 118

 Score = 48.2 bits (114), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            A        +  I+    ++ A       CE CG PI   R    P V  C+ C + 
Sbjct: 59  RATLREATTRLAEIDAALARLAAGRFGS--CETCGGPIEPGRLDARPWVRSCIGCASR 114


>UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q8R9_SULNB
          Length = 114

 Score = 48.2 bits (114), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 2/54 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
                 M  +     KI+       +C+ C   IP  R K+ P    CV C   
Sbjct: 60  EEATKRMNRLKHAYLKIDTPEYG--ICKECEEDIPIERLKLVPESLYCVACMNE 111


>UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 Tax=Shewanella
           RepID=A1RF16_SHESW
          Length = 110

 Score = 47.8 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + +   +  +Q  +  I     +IN+       C  CG  I   R    P VT C+ C
Sbjct: 54  QMELETARRKQHQLQVIEGALLRINSDEYGS--CFVCGEDIDLNRLMFDPTVTRCINC 109


>UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepID=Q3J1J5_RHOS4
          Length = 105

 Score = 47.8 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           Q  +  I     +I+A       C  CG  I EAR  + P    C +C 
Sbjct: 58  QQEIRAITAALARIDADEYG--FCVKCGAEIGEARLDVLPYTPFCRKCA 104


>UniRef50_Q2SPX6 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396
          RepID=Q2SPX6_HAHCH
          Length = 78

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D+A  + E+L  + + R R            C  C + IP  R++   GV+ CVEC+
Sbjct: 4  DILDQAAELQERLNASALARQRAGSALGQPSRAHCIDCEDAIPPLRQQ-LGGVSRCVECE 62

Query: 63 AYQERQRKH 71
           Y +  ++ 
Sbjct: 63 DYYQHAQRQ 71


>UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S312_9GAMM
          Length = 107

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  +A     + ++  I     KI         CE CG  I   R +  P    C+ C 
Sbjct: 49  DEVIDAIGNETRQSLHAIQVALDKIADGTYG--DCEKCGANIEAGRLQAIPESNCCMSCA 106


>UniRef50_C9MPK9 Putative DnaK suppressor protein n=2 Tax=Prevotella
           RepID=C9MPK9_9BACT
          Length = 127

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            +  +Q  + G+     +I+     +      G  IP+ R ++ P  TL V  +      
Sbjct: 70  MAQRQQKFIKGLQAALVRIDNKTYGID--RITGELIPKERLRVVPHATLSVASKEA---- 123

Query: 69  RKHY 72
            KH+
Sbjct: 124 NKHH 127


>UniRef50_Q0HYS5 Transcriptional regulators, TraR/DksA family n=3 Tax=Shewanella
          RepID=Q0HYS5_SHESR
          Length = 68

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D         E            K          C  CG+ IPE RR+   GV LCV CQ
Sbjct: 5  DLVTREQLRAEHRFEQQRKAQAAKPVP--PSATDCAECGDEIPEGRRQAILGVRLCVTCQ 62

Query: 63 AYQERQ 68
           ++E Q
Sbjct: 63 TWRESQ 68


>UniRef50_C1RJC9 DnaK suppressor protein n=4 Tax=Micrococcineae RepID=C1RJC9_9CELL
          Length = 113

 Score = 47.0 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           A        +  I+    ++ A       C   G P+ +AR +  P  T CV 
Sbjct: 61  ALGAAATRRLAEIDAALARVAAGTYGR--CAVGGEPLDDARLEARPTATTCVA 111


>UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xanthus DK 1622
          RepID=Q1CWM4_MYXXD
          Length = 101

 Score = 47.0 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 2/53 (3%)

Query: 11 VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
            E   +  I     +I         C  CG  I   R +  P    C+ C A
Sbjct: 48 QAEAQELRDIEEALTRIAHGEFGR--CARCGGAIGRHRLRAVPEARHCLTCAA 98


>UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SL78_9BACT
          Length = 144

 Score = 46.6 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
            T+ L +  + +  Q+I+A    V +       I E R +  P    C EC+   E++ 
Sbjct: 84  ETDALKLRLVEQALQRIDAGSYGVCIECE--EDIEEKRLEYVPFARYCTECKTELEKKG 140


>UniRef50_Q8CJP0 Putative uncharacterized protein SCO6165 n=3 Tax=Streptomyces
           RepID=Q8CJP0_STRCO
          Length = 125

 Score = 45.9 bits (108), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            + + ++ +  +     +I         C  C   I   R  I P    C  CQ  +E  
Sbjct: 67  LAASARMVLADVEAALDRIAEGRYGN--CHLCRRAIDRERLVIVPQARYCARCQQVREAG 124

Query: 69  R 69
           R
Sbjct: 125 R 125


>UniRef50_Q45478 Uncharacterized protein ylyA n=7 Tax=Bacillus RepID=YLYA_BACSU
          Length = 124

 Score = 45.5 bits (107), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 14 QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          +  +  +     KI         CE  G PIP A+  + P   
Sbjct: 52 KEELQDVLLALSKIENGTFG--YCEETGAPIPLAKLAVLPTAR 92


>UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S3A6_9GAMM
          Length = 112

 Score = 45.1 bits (106), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 2/53 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            +   Q  +  I     ++         C  CG+ I   R    P  T C+ C
Sbjct: 59  TARRRQQQLQKIKSALYRLEDGNYG--YCFTCGDAIDIGRLNFDPASTRCIGC 109


>UniRef50_A6W860 Transcriptional regulator, TraR/DksA family n=1 Tax=Kineococcus
           radiotolerans SRS30216 RepID=A6W860_KINRD
          Length = 111

 Score = 45.1 bits (106), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 2/47 (4%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGV 55
                +  +  +    ++I A    +      G PIP  R + +P  
Sbjct: 59  LLEGARRRLDSVADALKRIEAGTYGLS--VVSGEPIPAERLEAYPDA 103


>UniRef50_Q020R1 Serine phosphatase n=1 Tax=Candidatus Solibacter usitatus
          Ellin6076 RepID=Q020R1_SOLUE
          Length = 328

 Score = 45.1 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 16 TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
           +  I+    +I        +CE+C + I + R    P +  C++  +  E +   
Sbjct: 38 LIAEIDAALARIEHGQFG--ICESCHDSIEQDRLAHNPLIRFCLDHLSQAELRAHQ 91


>UniRef50_A2SLK3 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum
           PM1 RepID=A2SLK3_METPP
          Length = 131

 Score = 45.1 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            A+ A    + + +  +     +          C  CG PI  AR    P  + C +C
Sbjct: 60  IAESAAPRPDAVVLGEVRAALARFETGRYG--HCVECGAPIEPARLIERPQASRCDDC 115


>UniRef50_UPI00016C3638 transcriptional regulators, TraR/DksA family protein n=1
           Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3638
          Length = 122

 Score = 45.1 bits (106), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   +  ++E+  +        + +        C+ CG  +   R    P    C++C  
Sbjct: 57  EVARSVLLSEEQILGEAQAALARFDEGTFGR--CQRCGRAVARTRLATIPYARNCIKCAR 114

Query: 64  YQE 66
             E
Sbjct: 115 AAE 117


>UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12
          RepID=A8LJD1_DINSH
          Length = 92

 Score = 44.7 bits (105), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 13 EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          E   +  +    ++I      +  C ACG  I   R    P   LC  C+
Sbjct: 42 ELRQLRRLELALKRIETGAYGL--CMACGGEISPGRLHACPATALCASCK 89


>UniRef50_A6Q6G5 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q6G5_SULNB
          Length = 115

 Score = 44.7 bits (105), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
             ++ +T +     +I+       +C  C   I   R  + P    CVEC 
Sbjct: 61  ESKVRLTRLQNALLRIDKPMFG--ICIECEEEIGTGRMSVRPESVRCVECA 109


>UniRef50_Q2IF94 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=Q2IF94_ANADE
          Length = 115

 Score = 44.7 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
           +  E+  +  I+R   K++A    V   E  G PI   R    P   
Sbjct: 64  AERERALLADIDRALAKLDAGTYGVS--ERTGEPIAYERLAAVPWTR 108


>UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 Tax=Silicibacter
           lacuscaerulensis ITI-1157 RepID=D0CY54_9RHOB
          Length = 112

 Score = 44.7 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A      L    +N    +I+        CE CG+ I   R ++ P    CV C +
Sbjct: 58  AQQTRRDLEARRLNAALTRISKGEFG--YCEDCGDAIARGRLELDPAAGKCVSCAS 111


>UniRef50_B9JTX5 DnaK suppressor protein n=1 Tax=Agrobacterium vitis S4
           RepID=B9JTX5_AGRVS
          Length = 105

 Score = 44.7 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E+     +  + GI     ++ A       C  C   I   R  + P    C +C 
Sbjct: 46  DEVLESLGQAGENELRGIEAALARMEAGSYGR--CVTCDAAIAPERLALLPATPFCQDCA 103


>UniRef50_Q1MZF4 DnaK suppressor protein n=1 Tax=Bermanella marisrubri
           RepID=Q1MZF4_9GAMM
          Length = 110

 Score = 44.3 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E  EA +   Q  +  I     ++        +CE C   I   R    P   LC  C  
Sbjct: 51  EVAEAIAQETQQELQQIKHAILRLKQGQY--QVCELCQQSIEPERLLALPYTALCASCAN 108

Query: 64  YQ 65
            Q
Sbjct: 109 EQ 110


>UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellovibrio bacteriovorus
           RepID=Q6MHM2_BDEBA
          Length = 135

 Score = 44.3 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            +     +  +  I     +I         CE     I   R +  P   L +E    +E
Sbjct: 69  LSMHERMRGQLMEIESALARIEGGTFG--YCEETEEAIEPERLRAIPWTRLSIEGAEIRE 126

Query: 67  RQRKHYA 73
              K YA
Sbjct: 127 SMNKRYA 133


>UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteria
           RepID=C3KFN9_PSEFL
          Length = 119

 Score = 44.3 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            ++A     Q     + +  ++ +        C  CG  I   R    P   LC+ C + 
Sbjct: 58  MNDAIRGRAQHERVRLQQALKRWHKGEYG--WCNQCGALIALGRLVFDPATPLCITCASR 115

Query: 65  QE 66
            E
Sbjct: 116 VE 117


>UniRef50_A0LA91 Transcriptional regulator, TraR/DksA family n=5 Tax=Bacteria
           RepID=A0LA91_MAGSM
          Length = 119

 Score = 44.3 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           Q  +  I+    ++         C  CG  I   R +  P V  C+ C +  E +
Sbjct: 67  QQELRRIDAALVRLTDGSFG--ECLVCGGQIAPQRLQWDPSVATCIGCASRAESR 119


>UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 Tax=Comamonadaceae
           RepID=A1WBE4_ACISJ
          Length = 150

 Score = 43.9 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 33  PVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
               C  CG P+  AR    P    C+ CQ+  E + + 
Sbjct: 112 SYGECTDCGQPVGVARLLAQPAAARCIACQSKAEARGER 150


>UniRef50_UPI0001AEEFB7 hypothetical protein SghaA1_04058 n=2 Tax=Streptomyces
           RepID=UPI0001AEEFB7
          Length = 131

 Score = 43.9 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 5/67 (7%)

Query: 6   DEAYSVTEQLT---MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D     T +L    +  +     +++       +C  C  P+   R  I P    C  CQ
Sbjct: 67  DRGARQTRRLRPMGLADVEAALTRMDTGTYG--ICHLCRRPVQRDRLLIVPQARYCARCQ 124

Query: 63  AYQERQR 69
             +E  R
Sbjct: 125 QVREAAR 131


>UniRef50_UPI00016C3E17 hypothetical protein GobsU_32959 n=1 Tax=Gemmata obscuriglobus
          UQM 2246 RepID=UPI00016C3E17
          Length = 76

 Score = 43.9 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 37 CEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          C  CGN IP  R +  P   +CV C    
Sbjct: 7  CARCGNEIPAERLQALPETQVCVACSRAM 35


>UniRef50_Q1ZD90 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3
           RepID=Q1ZD90_9GAMM
          Length = 129

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 3/70 (4%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D      +  ++  I+     ++     +  C  C   I   R K       C  C  
Sbjct: 60  DIDLKALKDKIKSLKKIDAALSNLHLGMFGL--CSDCEEEIELERLKEDATQQRCQHCAE 117

Query: 64  YQERQR-KHY 72
              +Q  K Y
Sbjct: 118 KYNKQHFKQY 127


>UniRef50_B7QWI5 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11
           RepID=B7QWI5_9RHOB
          Length = 107

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
                I++   +++A    V  C  CG+ I E      PG + C  C
Sbjct: 61  ELRRDIDQALARVDAG--SVGYCNICGDRITEGHLAAHPGTSFCAAC 105


>UniRef50_A8LRU0 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae
           RepID=A8LRU0_DINSH
          Length = 117

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           A  V  +     I     ++         C  CG  I   R  + P    C +C+
Sbjct: 64  ALEVRRRGRRARIVAALHRMETGEFG--YCVDCGGFIGLPRLDVDPTTAECRDCK 116


>UniRef50_A4C5Q6 Putative DksA-type zinc finger protein n=1 Tax=Pseudoalteromonas
           tunicata D2 RepID=A4C5Q6_9GAMM
          Length = 117

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 13/53 (24%), Gaps = 2/53 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
                +  I     + +        C  C   I  AR +  P    C  C   
Sbjct: 67  ELIAKLNRIEAALCQFDIGQFG--YCADCEEIIELARLENDPTEQRCASCAKK 117


>UniRef50_Q0ALK2 Transcriptional regulators, TraR/DksA family n=1 Tax=Maricaulis
           maris MCS10 RepID=Q0ALK2_MARMM
          Length = 107

 Score = 43.2 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           E  +A +    + +  I     +++        C  CG  I  AR  + P V  C  C 
Sbjct: 51  EMAKAANARRTVEVRRIEAALARVDEDDYG--WCVECGEVIEPARLALDPAVPRCAGCA 107


>UniRef50_A9EK28 Putative uncharacterized protein n=2 Tax=Phaeobacter gallaeciensis
           RepID=A9EK28_9RHOB
          Length = 102

 Score = 43.2 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +  ++   S         I+    +++        C+ CG+ I ++     P    C  C
Sbjct: 43  AQPSEAVLSRKWLELRRDIDCALARLDEGSYG--YCQICGDRISDSHLSTHPTTAFCASC 100

Query: 62  Q 62
            
Sbjct: 101 A 101


>UniRef50_Q1IQ14 Serine phosphatase n=1 Tax=Candidatus Koribacter versatilis
          Ellin345 RepID=Q1IQ14_ACIBL
          Length = 341

 Score = 43.2 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 7/58 (12%)

Query: 15 LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC-----QAYQER 67
            +  +++   K+      V  C+ C   I   R    P VT C+ C     Q   E+
Sbjct: 37 HLLHDVDQALAKLETGNFGV--CQNCHESIEVDRVMADPLVTFCLGCLTPAQQRSLEQ 92


>UniRef50_Q080Q5 Transcriptional regulators, TraR/DksA family protein n=1
           Tax=Shewanella frigidimarina NCIMB 400
           RepID=Q080Q5_SHEFN
          Length = 123

 Score = 42.8 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 2/54 (3%)

Query: 18  TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
             ++    ++      +  C  C   I   R    P    C  C+    R+ +H
Sbjct: 66  MKLDAAYCQLELGLYGL--CSDCEMDIEPPRLFADPTEQRCTGCEQKFRREHRH 117


>UniRef50_A9DDI2 DnaK suppressor protein, putative n=2 Tax=Rhizobiales
           RepID=A9DDI2_9RHIZ
          Length = 110

 Score = 42.8 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
               +  +  I    +++         C  CG PI   R +I P    CV C +
Sbjct: 59  ERARKRDLVRIEMAERRLADGEYG--FCAECGEPIAGKRLEIDPMAEKCVRCAS 110


>UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae CT 5369-93
          RepID=D0HX41_VIBCH
          Length = 79

 Score = 42.8 bits (100), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 2/40 (5%)

Query: 16 TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGV 55
           +  I +   KI         CE+CG  I   R +  P  
Sbjct: 1  MIKKIEKTLDKIKEEDFG--YCESCGVEIGIRRLEAPPTA 38


>UniRef50_C9YVQ6 Putative uncharacterized protein n=2 Tax=Streptomyces
           RepID=C9YVQ6_STRSW
          Length = 126

 Score = 42.0 bits (98), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            + + ++ +  +    ++++        C  C  PI      I P    C  C+  +E  
Sbjct: 68  LAASARMVLADVEAALERMDQGRYG--HCHLCHGPIDRDLLTIVPQARYCARCRHLREAG 125

Query: 69  R 69
           R
Sbjct: 126 R 126


>UniRef50_A3YDJ1 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3YDJ1_9GAMM
          Length = 113

 Score = 41.6 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 2/50 (4%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            E L +  +     ++      +  C+ C  PI E R  I P +  C +C
Sbjct: 64  AENLALEAVQYAISRLQESDYGL--CKTCSKPIEEKRLTILPDIKHCFDC 111


>UniRef50_C1AE46 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1AE46_GEMAT
          Length = 118

 Score = 41.2 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 7/61 (11%)

Query: 6   DEAYSVTEQ-------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
           D A    +          +  I+    ++        L E  G  IP AR +I P     
Sbjct: 58  DVANEELQASIATRRSAELVEIDFAIDRLTNSPDTFGLDENTGEEIPFARLEIIPWARTT 117

Query: 59  V 59
           V
Sbjct: 118 V 118


>UniRef50_B6BP36 Transcriptional regulator, TraR/DksA family n=1
           Tax=Campylobacterales bacterium GD 1 RepID=B6BP36_9PROT
          Length = 114

 Score = 40.9 bits (95), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
              Q+ +  +    QKI        +C  C   I   R  + P  T CV C
Sbjct: 60  HEAQIRVNKLKYAIQKI--GKDGYGICAECEEEIIFGRLMLLPESTHCVAC 108


>UniRef50_D2B0C4 Transcriptional regulator, TraR/DksA family n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=D2B0C4_STRRD
          Length = 120

 Score = 40.9 bits (95), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 2/51 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
              +  +  I    ++++        C  CG  I   R +  P    C  C
Sbjct: 66  ERARKAVAEIEAAIERLDFGLYGT--CRRCGAFIALDRLRRAPHARYCAVC 114


>UniRef50_A7Z4G4 YlyA n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z4G4_BACA2
          Length = 123

 Score = 40.9 bits (95), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D+ +       +  +  +     K   +      CE  G+PIP  +  + P   
Sbjct: 39 MNDQ-EATLIYHIKEELQDVLLALSKFENNMYG--YCEKTGDPIPIEKLAVLPTAR 91


>UniRef50_B4D7F0 Transcriptional regulator, TraR/DksA family n=1
          Tax=Chthoniobacter flavus Ellin428 RepID=B4D7F0_9BACT
          Length = 72

 Score = 40.5 bits (94), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 32 IPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
            V  C  CG  IP+ R  + P   +CV C    
Sbjct: 3  PEVKNCRICGAEIPKERLDVIPDTEVCVRCSKKI 36


>UniRef50_Q12LK7 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans
           OS217 RepID=Q12LK7_SHEDO
          Length = 141

 Score = 40.5 bits (94), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 2/57 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
             +  ++    ++      +  C  C   I  AR    P    C  C     RQ + 
Sbjct: 81  QRLMQLDAAYCQLELGLYGL--CADCETQIEAARLSQDPTAQRCNHCDNKYHRQHRQ 135


>UniRef50_A1SW83 DnaK suppressor n=1 Tax=Psychromonas ingrahamii 37
           RepID=A1SW83_PSYIN
          Length = 129

 Score = 40.5 bits (94), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 19/65 (29%), Gaps = 2/65 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D +    +   +  I+     I         C  C   I   + +       C  C+  
Sbjct: 61  LDVSSLAHKTNEIKSIDASLNDIELGLYG--FCSDCEAEISIDKLQENVTTKRCDICEKK 118

Query: 65  QERQR 69
            ++Q+
Sbjct: 119 YQKQK 123


>UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseudomonas syringae
           group RepID=Q48NH0_PSE14
          Length = 138

 Score = 40.5 bits (94), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DEAD A               ++ T++ + +  + +       +  +  G  I   R  
Sbjct: 54  PDEADFASDEENRAVAASMIERDRQTLSHVLKALEILALGDYGFF--QETGEAIGIKRLL 111

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           + P     VE     E +  H
Sbjct: 112 LVPESLYSVESMRALEAKGMH 132


>UniRef50_Q0HHY4 Transcriptional regulators, TraR/DksA family n=11 Tax=Shewanella
           RepID=Q0HHY4_SHESM
          Length = 119

 Score = 40.5 bits (94), Expect = 0.019,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 2/56 (3%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            +  ++    +++     +  C  C   I   R    P    C  C  + + + +H
Sbjct: 60  RLNRLDAASCQLDLGLYGL--CSDCETEIEAERLNQDPTEQRCSSCAEHYQHEHRH 113


>UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FAI8_DESAA
          Length = 112

 Score = 40.1 bits (93), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 2/53 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
             +  M G+ R    I         C  C   IP  R  + P   +CV+C   
Sbjct: 61  NAKARMNGLLRALDNI--GDPDFGYCAICDEEIPIGRIMLVPESDVCVKCAQK 111


>UniRef50_UPI0000D553E9 prokaryotic dksA/traR C4-type zinc finger family protein n=1
           Tax=Psychroflexus torquis ATCC 700755
           RepID=UPI0000D553E9
          Length = 109

 Score = 40.1 bits (93), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 16/56 (28%), Gaps = 2/56 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
                      +     +I         C  C   I EAR  + P  +LCV C   
Sbjct: 55  LLRNAAEKQKKLKLALHRI--GEPKFGFCSLCEQAIQEARLLLMPESSLCVGCARR 108


>UniRef50_C7MER6 DnaK suppressor protein n=1 Tax=Brachybacterium faecium DSM 4810
           RepID=C7MER6_BRAFD
          Length = 114

 Score = 40.1 bits (93), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 21  NRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           +    ++      +  C  CG PI  AR  + P  T C++C 
Sbjct: 74  DEASSRLARGEDGL--CRRCGRPIAPARLAVRPEATTCIDCA 113


>UniRef50_A6WN37 Zinc finger-related protein n=4 Tax=Shewanella RepID=A6WN37_SHEB8
          Length = 74

 Score = 39.7 bits (92), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 3  DEADEAYSVTEQLTMTGINRIR--QKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          DE D A ++  +     ++ +R   +   H     +C  C  P    R         C+ 
Sbjct: 2  DETDWASNMETRERAACVDAVRDAARHKQHSTGNGICIDCLEPNEPQRLNEL----RCIS 57

Query: 61 CQAYQERQRKHY 72
          CQ  +++++K  
Sbjct: 58 CQEDEDKRQKMR 69


>UniRef50_Q88BV3 DnaK suppressor domain protein n=1 Tax=Pseudomonas syringae pv.
          tomato RepID=Q88BV3_PSESM
          Length = 66

 Score = 39.7 bits (92), Expect = 0.030,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
             + +  ++ + ++ + +         C+  G  I   R  + P     VE     E +
Sbjct: 1  MIESGRQALSHVLKVLEILALGDYG--FCQETGEAIGLKRLLLVPESLYSVESMRVLEAK 58

Query: 69 RKH 71
            H
Sbjct: 59 GMH 61


>UniRef50_Q2N719 DnaK suppressor protein, putative n=9 Tax=Alphaproteobacteria
           RepID=Q2N719_ERYLH
          Length = 111

 Score = 39.7 bits (92), Expect = 0.030,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           I     +++        C  CG  I   R    P V  C+ C +
Sbjct: 67  IVAALTRLDEGEWG--YCIRCGEEIAAKRLAHDPSVPRCMGCAS 108


>UniRef50_Q1GF41 Transcriptional regulators TraR/DksA family n=2 Tax=Ruegeria
           RepID=Q1GF41_SILST
          Length = 102

 Score = 38.9 bits (90), Expect = 0.048,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 12/47 (25%), Gaps = 2/47 (4%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
             +  I     ++ A       C  CG  I        P    C  C
Sbjct: 56  REVKAILTALDRMEAGEYG--YCRICGADISSEHLSAHPESPFCEFC 100


>UniRef50_A1SEE1 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614
           RepID=A1SEE1_NOCSJ
          Length = 123

 Score = 38.6 bits (89), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 2/57 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           A+  + Q  +  I   + ++         C  CG     AR    P   LC  C A 
Sbjct: 69  AHRESVQRILQDIRAAQAELADGSYGS--CRRCGARTDLARALSRPWAPLCGSCSAR 123


>UniRef50_B8CMX6 DksA-type zinc finger protein n=8 Tax=Shewanella RepID=B8CMX6_SHEPW
          Length = 127

 Score = 38.6 bits (89), Expect = 0.061,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 19/63 (30%), Gaps = 2/63 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              +    +  ++  R ++      V  C  C   I        P    C+ C    +R+
Sbjct: 61  CDHSLFFKLMQLDAARCQLEIGLYGV--CSDCEENIEAELLAADPLEQRCLSCNNLHKRE 118

Query: 69  RKH 71
            + 
Sbjct: 119 HRQ 121


>UniRef50_A4A0C8 Putative uncharacterized protein n=1 Tax=Blastopirellula marina
          DSM 3645 RepID=A4A0C8_9PLAN
          Length = 129

 Score = 38.6 bits (89), Expect = 0.071,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 34 VYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            +C+ C  PIP  R ++FP    CV C+   +    H
Sbjct: 58 RRVCQVCRQPIPLERLEVFPDADTCVGCREKLDNADDH 95


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiob...    80   3e-14
UniRef50_P41065 Protein traR n=37 Tax=root RepID=TRAR_ECOLI            78   8e-14
UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 ...    77   1e-13
UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=5...    77   2e-13
UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 ...    76   2e-13
UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilu...    76   3e-13
UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 ...    76   4e-13
UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campy...    76   4e-13
UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammapro...    75   6e-13
UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacter...    75   7e-13
UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 ...    75   8e-13
UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotom...    74   1e-12
UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5...    74   1e-12
UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 ...    74   1e-12
UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 ...    74   1e-12
UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 ...    74   2e-12
UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B...    73   2e-12
UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=6...    73   2e-12
UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 ...    73   2e-12
UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carbo...    73   2e-12
UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyce...    73   3e-12
UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibr...    73   3e-12
UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7...    73   3e-12
UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1...    73   4e-12
UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 ...    72   4e-12
UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobact...    72   4e-12
UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gr...    72   4e-12
UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 ...    72   5e-12
UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 ...    72   5e-12
UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB...    72   6e-12
UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=...    72   6e-12
UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 ...    72   6e-12
UniRef50_Q3ZL39 Putative uncharacterized protein n=1 Tax=Escheri...    72   7e-12
UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 ...    72   7e-12
UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 ...    72   7e-12
UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 ...    71   8e-12
UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 ...    71   9e-12
UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomyc...    71   1e-11
UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobact...    71   1e-11
UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 ...    71   1e-11
UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillu...    71   1e-11
UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marin...    71   1e-11
UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 ...    71   1e-11
UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia Re...    71   2e-11
UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 ...    71   2e-11
UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 ...    70   2e-11
UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID...    70   2e-11
UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Helioba...    70   2e-11
UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1 ...    70   2e-11
UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria R...    70   2e-11
UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacte...    70   2e-11
UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 ...    70   2e-11
UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 ...    70   2e-11
UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 ...    70   2e-11
UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gamm...    70   2e-11
UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candida...    70   3e-11
UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 ...    70   3e-11
UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacte...    70   3e-11
UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Br...    70   3e-11
UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253...    70   3e-11
UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 ...    69   3e-11
UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solana...    69   3e-11
UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA fami...    69   3e-11
UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10...    69   4e-11
UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1...    69   4e-11
UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68...    69   4e-11
UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35...    69   4e-11
UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 ...    69   5e-11
UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family pro...    69   5e-11
UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Ther...    69   5e-11
UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobac...    69   5e-11
UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14...    69   5e-11
UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3...    69   5e-11
UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 ...    69   5e-11
UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID...    69   6e-11
UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastop...    69   6e-11
UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ...    69   6e-11
UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopi...    68   7e-11
UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3...    68   7e-11
UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 ...    68   7e-11
UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 ...    68   7e-11
UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificac...    68   8e-11
UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YT...    68   8e-11
UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 ...    68   8e-11
UniRef50_P41059 Uncharacterized 8.5 kDa protein in gpA 5'region ...    68   8e-11
UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteo...    68   8e-11
UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 ...    68   9e-11
UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovib...    68   9e-11
UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1...    68   1e-10
UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemm...    68   1e-10
UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bil...    67   1e-10
UniRef50_A1JNK3 Hypothetical 8.2 kDa protein in gpa 5'region (Co...    67   1e-10
UniRef50_UPI0001827371 putative prophage protein n=1 Tax=Enterob...    67   1e-10
UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 ...    67   1e-10
UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria R...    67   1e-10
UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Term...    67   1e-10
UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 ...    67   2e-10
UniRef50_A3YA40 C4-type zinc finger protein, DksA/TraR family pr...    67   2e-10
UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae ...    67   2e-10
UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria...    67   2e-10
UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 ...    67   2e-10
UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 ...    67   2e-10
UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 ...    67   2e-10
UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1...    67   2e-10
UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostri...    67   2e-10
UniRef50_A2I309 Conjugative transfer protein n=1 Tax=Vibrio phag...    67   2e-10
UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter ...    67   2e-10
UniRef50_D2BWU8 Transcriptional regulator, TraR/DksA family n=4 ...    66   3e-10
UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1...    66   3e-10
UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydroge...    66   3e-10
UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera a...    66   3e-10
UniRef50_B3QCL2 Transcriptional regulator, TraR/DksA family n=14...    66   3e-10
UniRef50_C6MQY5 Transcriptional regulator, TraR/DksA family n=1 ...    66   3e-10
UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 ...    66   3e-10
UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus su...    66   3e-10
UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus ...    66   3e-10
UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 ...    66   3e-10
UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family prot...    66   3e-10
UniRef50_C0QW50 DNA-binding transcriptional regulator of transcr...    66   3e-10
UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subt...    66   3e-10
UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 ...    66   4e-10
UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 ...    66   4e-10
UniRef50_C9XYU8 Uncharacterized 8.5 kDa protein in gpA 5'region ...    66   4e-10
UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 ...    66   4e-10
UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID...    66   4e-10
UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuens...    66   4e-10
UniRef50_Q65AH5 TraR protein n=4 Tax=Enterobacteriaceae RepID=Q6...    66   4e-10
UniRef50_Q7N7S5 Similar to unknown protein n=1 Tax=Photorhabdus ...    66   4e-10
UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 ...    66   4e-10
UniRef50_Q125W5 Transcriptional regulators, TraR/DksA family n=1...    66   5e-10
UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verruco...    66   5e-10
UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacte...    66   6e-10
UniRef50_Q1AWF1 Transcriptional regulators, TraR/DksA family n=1...    66   6e-10
UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 ...    66   6e-10
UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmati...    65   6e-10
UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter Rep...    65   6e-10
UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11...    65   6e-10
UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 ...    65   7e-10
UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium...    65   7e-10
UniRef50_A1VE28 Transcriptional regulator, TraR/DksA family n=12...    65   7e-10
UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n...    65   7e-10
UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 ...    65   8e-10
UniRef50_B5XPP1 Phage/conjugal plasmid C-4 type zinc finger prot...    65   8e-10
UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 ...    65   9e-10
UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 ...    65   9e-10
UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacte...    65   9e-10
UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 ...    64   1e-09
UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3...    64   1e-09
UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces lim...    64   1e-09
UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family ...    64   1e-09
UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomyc...    64   1e-09
UniRef50_B8FC44 Transcriptional regulator, TraR/DksA family n=2 ...    64   1e-09
UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candi...    64   1e-09
UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=...    64   1e-09
UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR famil...    64   1e-09
UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbac...    64   1e-09
UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 ...    64   2e-09
UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=1...    64   2e-09
UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 ...    64   2e-09
UniRef50_UPI0001AEFD73 hypothetical protein SghaA1_01734 n=1 Tax...    63   2e-09
UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=...    63   2e-09
UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 ...    63   2e-09
UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26...    63   3e-09
UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 ...    63   3e-09
UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9...    63   3e-09
UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 ...    63   3e-09
UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1...    63   3e-09
UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostrid...    63   3e-09
UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 ...    63   3e-09
UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 ...    63   4e-09
UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 ...    63   4e-09
UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10...    63   4e-09
UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppress...    63   4e-09
UniRef50_A4SL94 Phage protein n=2 Tax=root RepID=A4SL94_AERS4          62   4e-09
UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 ...    62   4e-09
UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 ...    62   4e-09
UniRef50_C5B4E4 Putative uncharacterized protein n=1 Tax=Methylo...    62   4e-09
UniRef50_A8GA41 Transcriptional regulator, TraR/DksA family n=1 ...    62   4e-09
UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13...    62   4e-09
UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1...    62   4e-09
UniRef50_B8F4E6 DnaK suppressor protein/ C4-type zinc finger pro...    62   4e-09
UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermom...    62   4e-09
UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitroso...    62   5e-09
UniRef50_Q4QK09 DnaK suppressor protein, bacteriophage PSP3 gp34...    62   5e-09
UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4...    62   5e-09
UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus ...    62   5e-09
UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus c...    62   5e-09
UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 ...    62   6e-09
UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 ...    62   6e-09
UniRef50_B4F0L8 Phage protein n=4 Tax=Enterobacteriaceae RepID=B...    62   6e-09
UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 ...    62   6e-09
UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=...    62   6e-09
UniRef50_Q4FUG7 Possible phage TraR/DksA family protein n=1 Tax=...    62   7e-09
UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 ...    62   7e-09
UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 ...    62   8e-09
UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 ...    62   8e-09
UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 ...    61   9e-09
UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythro...    61   9e-09
UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID...    61   9e-09
UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 ...    61   9e-09
UniRef50_B9Z318 Transcriptional regulator, TraR/DksA family n=2 ...    61   1e-08
UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitroco...    61   1e-08
UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbi...    61   1e-08
UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Hermini...    61   1e-08
UniRef50_Q2W8C2 Putative uncharacterized protein n=1 Tax=Magneto...    61   1e-08
UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacter...    61   1e-08
UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA fam...    61   1e-08
UniRef50_Q88IG2 C4-type zinc finger protein, DksA/TraR family n=...    61   1e-08
UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1...    61   1e-08
UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1...    61   2e-08
UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 ...    61   2e-08
UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 ...    61   2e-08
UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 ...    61   2e-08
UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromono...    61   2e-08
UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=3...    61   2e-08
UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromon...    61   2e-08
UniRef50_A9QS46 Putative conjugal transfer protein TraR n=1 Tax=...    60   2e-08
UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 ...    60   2e-08
UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Plancto...    60   2e-08
UniRef50_A6UZ55 Conserved domain protein n=2 Tax=Pseudomonas Rep...    60   2e-08
UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2...    60   2e-08
UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD     60   2e-08
UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 ...    60   2e-08
UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangi...    60   2e-08
UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1 ...    60   3e-08
UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobi...    60   3e-08
UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillu...    60   3e-08
UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 ...    60   3e-08
UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax...    60   3e-08
UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 ...    60   3e-08
UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium teta...    60   3e-08
UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 ...    59   3e-08
UniRef50_C6BZJ9 Transcriptional regulator, TraR/DksA family n=1 ...    59   3e-08
UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_C4GGH6 Putative uncharacterized protein n=1 Tax=Kingell...    59   4e-08
UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobi...    59   4e-08
UniRef50_A7N392 Putative uncharacterized protein n=1 Tax=Vibrio ...    59   4e-08
UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 ...    59   4e-08
UniRef50_Q9ZBS4 Putative uncharacterized protein SCO6164 n=4 Tax...    59   4e-08
UniRef50_UPI0001826470 hypothetical protein EcanA3_08019 n=1 Tax...    59   4e-08
UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwell...    59   5e-08
UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 ...    59   5e-08
UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 ...    59   5e-08
UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptun...    59   5e-08
UniRef50_A4JDG9 Transcriptional regulator, TraR/DksA family n=4 ...    59   6e-08
UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 ...    59   6e-08
UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1...    59   6e-08
UniRef50_B5EUP2 Zinc finger protein n=32 Tax=Proteobacteria RepI...    59   6e-08
UniRef50_A1F607 Conserved domain protein n=3 Tax=Vibrio cholerae...    59   6e-08
UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepI...    59   6e-08
UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family pro...    59   6e-08
UniRef50_B3B1J8 Conserved domain protein n=5 Tax=Gammaproteobact...    59   7e-08
UniRef50_Q2LQQ9 Hypothetical cytosolic protein n=1 Tax=Syntrophu...    58   7e-08
UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bactero...    58   7e-08
UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinob...    58   7e-08
UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3 ...    58   7e-08
UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 ...    58   7e-08
UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=...    58   8e-08
UniRef50_A9ID32 Putative uncharacterized protein n=1 Tax=Bordete...    58   8e-08
UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 ...    58   9e-08
UniRef50_A9N2T0 Putative uncharacterized protein n=1 Tax=Salmone...    58   9e-08
UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=...    58   9e-08
UniRef50_B6ICF8 TraR protein n=1 Tax=Escherichia coli SE11 RepID...    58   1e-07
UniRef50_A4XQ42 Transcriptional regulator, TraR/DksA family n=11...    58   1e-07
UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR fa...    58   1e-07
UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 ...    58   1e-07
UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 ...    58   1e-07
UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 ...    58   1e-07
UniRef50_A7ZJE9 Phage/conjugal plasmid C-4 type zinc finger prot...    58   1e-07
UniRef50_P41039 Uncharacterized protein ybiI n=135 Tax=Proteobac...    57   1e-07
UniRef50_C4LBC7 Transcriptional regulator, TraR/DksA family n=1 ...    57   1e-07
UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinom...    57   1e-07
UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 ...    57   1e-07
UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2 ...    57   2e-07
UniRef50_B6YQN7 DnaK suppressor protein n=1 Tax=Candidatus Azoba...    57   2e-07
UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM...    57   2e-07
UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 ...    57   2e-07
UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11...    57   2e-07
UniRef50_A1SED9 Putative DnaK suppressor protein n=1 Tax=Nocardi...    57   2e-07
UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinel...    57   2e-07
UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candida...    57   2e-07
UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 ...    57   2e-07
UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 ...    57   2e-07
UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter ked...    57   2e-07
UniRef50_Q48285 Haemophilus somnus cryptic prophage genes, capsi...    57   3e-07
UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 ...    57   3e-07
UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus hal...    56   3e-07
UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 ...    56   3e-07
UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 ...    56   3e-07
UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales ...    56   3e-07
UniRef50_A4TVR6 DnaK suppressor protein n=3 Tax=Magnetospirillum...    56   3e-07
UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 ...    56   3e-07
UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family prot...    56   3e-07
UniRef50_Q3Z6R5 DnaK suppressor protein, putative n=5 Tax=Dehalo...    56   4e-07
UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. ...    56   4e-07
UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 ...    56   4e-07
UniRef50_A3HVW0 DnaK suppressor protein, putative n=2 Tax=Bacter...    56   4e-07
UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 ...    56   4e-07
UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 ...    56   4e-07
UniRef50_C9R760 Putative uncharacterized protein n=1 Tax=Aggrega...    56   4e-07
UniRef50_Q8EDR9 C4-type zinc finger protein, DksA/TraR family n=...    56   5e-07
UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 ...    56   5e-07
UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax...    56   5e-07
UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=...    56   5e-07
UniRef50_B5TA71 Gp07 n=2 Tax=root RepID=B5TA71_9CAUD                   56   5e-07
UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 ...    56   5e-07
UniRef50_Q9MC51 Orf77 n=1 Tax=Pseudomonas phage D3 RepID=Q9MC51_...    56   5e-07
UniRef50_P44221 Uncharacterized protein HI1497 n=3 Tax=Haemophil...    56   6e-07
UniRef50_D1U4E4 Transcriptional regulator, TraR/DksA family n=1 ...    55   6e-07
UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1...    55   6e-07
UniRef50_D0KGB6 Transcriptional regulator, TraR/DksA family n=1 ...    55   6e-07
UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesio...    55   7e-07
UniRef50_Q1VTU7 General stress protein, DnaK suppressor DskA n=1...    55   7e-07
UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes R...    55   7e-07
UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 ...    55   7e-07
UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Sacchar...    55   7e-07
UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4 ...    55   7e-07
UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM...    55   8e-07
UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50...    55   8e-07
UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 ...    55   8e-07
UniRef50_A0YAF5 DnaK suppressor protein n=1 Tax=marine gamma pro...    55   9e-07
UniRef50_UPI000190AE5D hypothetical protein Salmoneentericaenter...    55   9e-07
UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 ...    54   1e-06
UniRef50_Q144T3 Transcriptional regulators, TraR/DksA family n=2...    54   1e-06
UniRef50_Q602X1 Putative uncharacterized protein n=1 Tax=Methylo...    54   1e-06
UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 ...    54   1e-06
UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoa...    54   1e-06
UniRef50_C5S4P2 Putative uncharacterized protein n=2 Tax=Pasteur...    54   1e-06
UniRef50_Q52PP5 Putative uncharacterized protein n=1 Tax=Xanthom...    54   1e-06
UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Strepto...    54   1e-06
UniRef50_Q0EWC9 Putative uncharacterized protein n=1 Tax=Maripro...    54   1e-06
UniRef50_A1SCC2 Putative uncharacterized protein n=1 Tax=Nocardi...    54   1e-06
UniRef50_B0V602 Putative uncharacterized protein n=1 Tax=Acineto...    54   2e-06
UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfuro...    54   2e-06
UniRef50_C4WG44 Transcriptional regulator, TraR/DksA family n=1 ...    54   2e-06
UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gam...    54   2e-06
UniRef50_A1B365 Transcriptional regulator, TraR/DksA family n=35...    54   2e-06
UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax...    54   2e-06
UniRef50_Q1ZD90 Putative uncharacterized protein n=1 Tax=Psychro...    53   2e-06
UniRef50_B1FBH2 Transcriptional regulator, TraR/DksA family n=1 ...    53   2e-06
UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 ...    53   3e-06
UniRef50_UPI0001C31ADF transcriptional regulator, TraR/DksA fami...    53   3e-06
UniRef50_Q8H9Q7 ORF8 n=1 Tax=Vibrio phage VHML RepID=Q8H9Q7_9CAUD      53   3e-06
UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 ...    53   3e-06
UniRef50_C9MPK9 Putative DnaK suppressor protein n=2 Tax=Prevote...    53   3e-06
UniRef50_A4NCL4 Putative uncharacterized protein n=1 Tax=Haemoph...    53   3e-06
UniRef50_B2I3M6 Putative uncharacterized protein n=3 Tax=Acineto...    53   3e-06
UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine ...    53   3e-06
UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax...    53   3e-06
UniRef50_B0TKU6 Transcriptional regulator, TraR/DksA family n=1 ...    53   3e-06
UniRef50_A7HD49 Transcriptional regulator, TraR/DksA family n=1 ...    53   3e-06
UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 ...    52   4e-06
UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 ...    52   4e-06
UniRef50_Q9ZXI6 Orf39 n=3 Tax=root RepID=Q9ZXI6_9CAUD                  52   4e-06
UniRef50_B7V4J8 Repressor, PtrB n=8 Tax=Pseudomonas RepID=B7V4J8...    52   4e-06
UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 ...    52   5e-06
UniRef50_C6XZU8 DnaK suppressor protein n=4 Tax=Bacteroidetes Re...    52   5e-06
UniRef50_Q020R1 Serine phosphatase n=1 Tax=Candidatus Solibacter...    52   5e-06
UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio ac...    52   5e-06
UniRef50_B7J8S5 Putative uncharacterized protein n=1 Tax=Acidith...    52   5e-06
UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio ac...    52   6e-06
UniRef50_A8R990 Putative uncharacterized protein n=2 Tax=unclass...    52   6e-06
UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteri...    52   8e-06
UniRef50_Q06424 Uncharacterized 8.2 kDa protein in gpA 5'region ...    52   8e-06
UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xant...    52   8e-06
UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1 ...    52   8e-06
UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 ...    52   8e-06
UniRef50_A5EYQ4 DksA-like zinc finger domain containing protein ...    51   8e-06
UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3 ...    51   9e-06
UniRef50_Q1QXM4 Transcriptional regulators, TraR/DksA family n=3...    51   9e-06
UniRef50_A4XZG1 Transcriptional regulator, TraR/DksA family n=1 ...    51   9e-06
UniRef50_B7QWI5 Putative uncharacterized protein n=1 Tax=Ruegeri...    51   9e-06
UniRef50_C8N773 TraR/DksA family transcriptional regulator n=1 T...    51   1e-05
UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family prot...    51   1e-05
UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepI...    51   1e-05
UniRef50_B9JTX5 DnaK suppressor protein n=1 Tax=Agrobacterium vi...    51   1e-05
UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine ...    51   1e-05
UniRef50_A4XRJ7 Transcriptional regulator, TraR/DksA family n=8 ...    51   1e-05
UniRef50_Q45478 Uncharacterized protein ylyA n=7 Tax=Bacillus Re...    51   1e-05
UniRef50_D1VL44 Transcriptional regulator, TraR/DksA family n=3 ...    51   1e-05
UniRef50_C1RJC9 DnaK suppressor protein n=4 Tax=Micrococcineae R...    51   1e-05
UniRef50_A3EVE8 Putative uncharacterized protein n=1 Tax=Leptosp...    51   2e-05
UniRef50_B6EIS7 Probable rRNA transcription initiatior protein,p...    50   2e-05
UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ...    50   2e-05
UniRef50_Q2WA51 DnaK suppressor protein n=1 Tax=Magnetospirillum...    50   2e-05
UniRef50_Q8CJP0 Putative uncharacterized protein SCO6165 n=3 Tax...    50   2e-05
UniRef50_B8J2D3 Transcriptional regulator, TraR/DksA family n=1 ...    50   2e-05
UniRef50_A0LA91 Transcriptional regulator, TraR/DksA family n=5 ...    50   2e-05
UniRef50_UPI00016C3638 transcriptional regulators, TraR/DksA fam...    50   3e-05
UniRef50_B0ZSI9 Putative uncharacterized protein n=1 Tax=Halomon...    50   3e-05
UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellov...    50   3e-05
UniRef50_B7WXU2 Transcriptional regulator, TraR/DksA family n=1 ...    49   3e-05
UniRef50_Q6U9H2 Putative uncharacterized protein n=2 Tax=unclass...    49   4e-05
UniRef50_B9JYG7 DnaK suppressor protein n=2 Tax=Agrobacterium vi...    49   4e-05
UniRef50_A2SLK3 Putative uncharacterized protein n=1 Tax=Methyli...    49   6e-05
UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 ...    49   6e-05
UniRef50_A6Q6G5 Putative uncharacterized protein n=1 Tax=Sulfuro...    48   9e-05
UniRef50_Q1MZF4 DnaK suppressor protein n=1 Tax=Bermanella maris...    48   1e-04
UniRef50_C6NRK8 Putative uncharacterized protein n=1 Tax=Acidith...    48   1e-04
UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacte...    47   1e-04
UniRef50_UPI0001AEEFB7 hypothetical protein SghaA1_04058 n=2 Tax...    47   1e-04
UniRef50_Q2IF94 Transcriptional regulator, TraR/DksA family n=4 ...    47   2e-04
UniRef50_Q1GXR9 Transcriptional regulators, TraR/DksA family n=1...    47   2e-04
UniRef50_A6W860 Transcriptional regulator, TraR/DksA family n=1 ...    47   2e-04
UniRef50_Q0HYS5 Transcriptional regulators, TraR/DksA family n=3...    46   3e-04
UniRef50_Q2SPX6 DnaK suppressor protein n=1 Tax=Hahella chejuens...    45   8e-04
UniRef50_UPI00016C3E17 hypothetical protein GobsU_32959 n=1 Tax=...    44   0.001
UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 ...    44   0.002

Sequences not found previously or not previously below threshold:

UniRef50_A9EK28 Putative uncharacterized protein n=2 Tax=Phaeoba...    50   3e-05
UniRef50_Q1IQ14 Serine phosphatase n=1 Tax=Candidatus Koribacter...    49   6e-05
UniRef50_Q0ALK2 Transcriptional regulators, TraR/DksA family n=1...    47   1e-04
UniRef50_C9YVQ6 Putative uncharacterized protein n=2 Tax=Strepto...    47   2e-04
UniRef50_A4C5Q6 Putative DksA-type zinc finger protein n=1 Tax=P...    47   3e-04
UniRef50_A7Z4G4 YlyA n=1 Tax=Bacillus amyloliquefaciens FZB42 Re...    46   3e-04
UniRef50_A8LRU0 Putative uncharacterized protein n=3 Tax=Rhodoba...    46   4e-04
UniRef50_Q080Q5 Transcriptional regulators, TraR/DksA family pro...    45   7e-04
UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae ...    45   9e-04
UniRef50_A1SW83 DnaK suppressor n=1 Tax=Psychromonas ingrahamii ...    45   9e-04
UniRef50_Q1GF41 Transcriptional regulators TraR/DksA family n=2 ...    44   0.001
UniRef50_A9DDI2 DnaK suppressor protein, putative n=2 Tax=Rhizob...    44   0.002
UniRef50_D2B0C4 Transcriptional regulator, TraR/DksA family n=1 ...    44   0.002
UniRef50_A3YDJ1 Putative uncharacterized protein n=1 Tax=Marinom...    44   0.002
UniRef50_Q12LK7 Putative uncharacterized protein n=1 Tax=Shewane...    43   0.002
UniRef50_UPI0000D553E9 prokaryotic dksA/traR C4-type zinc finger...    43   0.003
UniRef50_Q2N719 DnaK suppressor protein, putative n=9 Tax=Alphap...    43   0.004
UniRef50_B6BP36 Transcriptional regulator, TraR/DksA family n=1 ...    42   0.004
UniRef50_Q0HHY4 Transcriptional regulators, TraR/DksA family n=1...    42   0.005
UniRef50_B8CMX6 DksA-type zinc finger protein n=8 Tax=Shewanella...    42   0.006
UniRef50_Q88BV3 DnaK suppressor domain protein n=1 Tax=Pseudomon...    42   0.007
UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1 ...    42   0.007
UniRef50_B9MIL7 Transcriptional regulator, TraR/DksA family n=3 ...    41   0.011
UniRef50_C7MER6 DnaK suppressor protein n=1 Tax=Brachybacterium ...    41   0.011
UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseu...    41   0.012
UniRef50_B4D7F0 Transcriptional regulator, TraR/DksA family n=1 ...    41   0.012
UniRef50_A1SEE1 Putative uncharacterized protein n=1 Tax=Nocardi...    41   0.017
UniRef50_A6WN37 Zinc finger-related protein n=4 Tax=Shewanella R...    41   0.017
UniRef50_C1AE46 Putative uncharacterized protein n=1 Tax=Gemmati...    40   0.023
UniRef50_A6Q3X7 Putative uncharacterized protein n=1 Tax=Nitrati...    40   0.026
UniRef50_Q6LTF1 Hypothetical dksA-type zinc finger protein n=5 T...    40   0.031
UniRef50_Q3IKM8 Putative DksA-type zinc finger protein n=2 Tax=A...    39   0.039
UniRef50_A7GRL9 Transcriptional regulator, TraR/DksA family n=78...    39   0.040
UniRef50_A4A0C8 Putative uncharacterized protein n=1 Tax=Blastop...    39   0.062

>UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67Q17_SYMTH
          Length = 269

 Score = 79.8 bits (196), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D          +  I    Q+++       +CE CG PI   R K FP  T C+ CQ  +
Sbjct: 60  DLGLRSHMLRRIQEIESALQRMDQGTYG--ICEECGRPIDPERLKAFPSATTCITCQQRR 117

Query: 66  ERQRKHY 72
           E +   +
Sbjct: 118 EARPDRF 124


>UniRef50_P41065 Protein traR n=37 Tax=root RepID=TRAR_ECOLI
          Length = 73

 Score = 78.2 bits (192), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE
Sbjct: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60

Query: 61 CQAYQERQRKHYA 73
          CQAYQERQRKHYA
Sbjct: 61 CQAYQERQRKHYA 73


>UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 Tax=Verrucomicrobia
           RepID=B4D0A5_9BACT
          Length = 233

 Score = 77.5 bits (190), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 4   EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+   EQ  +  I    ++I      V  CE  G PI   R +  P     VEC
Sbjct: 134 DRDFALSLLSQEQDALYEIEEALKRIELGTYGV--CEMSGKPIAHPRLEALPFARYTVEC 191

Query: 62  QAYQERQRK 70
           Q+  E+Q K
Sbjct: 192 QSQIEKQGK 200


>UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=58
           Tax=Betaproteobacteria RepID=Q21SV6_RHOFD
          Length = 429

 Score = 77.1 bits (189), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  +  I +   +I++       C+  G  I   R  
Sbjct: 348 PDPADRATIEEEHALELRTRDRERKLLKKIEQSLARIDSGDYG--YCDETGEAIGVGRLL 405

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   L +E Q  +E ++K +
Sbjct: 406 ARPTANLSLEAQQRRELKQKMF 427


>UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7
           Tax=Cystobacterineae RepID=A7H9X1_ANADF
          Length = 120

 Score = 76.3 bits (187), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 1   MSDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           + DE D A S             E+  +  I++   +I        +CE C   I   R 
Sbjct: 39  LPDEIDLASSEYTQSMIFRLRDREKFLLAKIDKALARIENGTFG--ICERCEEEISVKRL 96

Query: 50  KIFPGVTLCVECQAYQERQRKHY 72
           +  P  TLC+ C+  QE++ K +
Sbjct: 97  EARPVTTLCIRCKEEQEQKEKSF 119


>UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilum infernorum V4
           RepID=B3DUR8_METI4
          Length = 249

 Score = 76.3 bits (187), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 4   EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+   E  ++  I+   ++I  +     +C+ CG PIP  R +  P     V+C
Sbjct: 147 DRDFALSLLSQENDSLIEIDDSLKRIEDNTYG--ICQMCGKPIPIIRLQAIPYARFTVDC 204

Query: 62  QAYQERQR 69
           Q   E+++
Sbjct: 205 QRQLEKEK 212


>UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 Tax=Ammonifex
           degensii KC4 RepID=C9R7U4_AMMDK
          Length = 176

 Score = 75.9 bits (186), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  I    +++         CE+CG PIP  R +  P  TLC  C+  Q
Sbjct: 39  DLALREDALLKLQVIEDALRRLEEGTYG--YCESCGAPIPRERLEAVPYTTLCHACKERQ 96

Query: 66  ERQRKHY 72
           E +    
Sbjct: 97  EAKGVRR 103


>UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campylobacter
           RepID=A1VXK8_CAMJJ
          Length = 120

 Score = 75.6 bits (185), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A S   +  +  I     KI        +CE+C + I   R K+ P    C+ C+ 
Sbjct: 53  QIDFAISTNLKEELIEIEDSLDKIKNGTYG--ICESCDDEIDSQRLKVKPHARYCITCRQ 110

Query: 64  YQERQRKH 71
             E+ +KH
Sbjct: 111 IAEQGKKH 118


>UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammaproteobacteria
           RepID=DKSA_BUCBP
          Length = 151

 Score = 75.2 bits (184), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I +  +K+         CE+CG  I   R +
Sbjct: 70  PDPIDRAVQEEEFSFELRHRDRERKLIEKIEKTLKKVENKDFG--YCESCGIEIGIKRLE 127

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+   E + K 
Sbjct: 128 ARPTANLCIDCKTLSEIREKQ 148


>UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacteria
           RepID=A6T2Z9_JANMA
          Length = 310

 Score = 74.8 bits (183), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  +  + +    I++       CE  G PI   R  
Sbjct: 229 PDPADRATIEEEHALELRTRDRERKLLKKVQQSLLSIDSGEYG--WCEETGEPIGVPRLL 286

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q  +E ++K Y
Sbjct: 287 ARPTATLSLEAQQRRELKQKLY 308


>UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LWG8_BACS4
          Length = 242

 Score = 74.8 bits (183), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A +   +  +  I+   + I         CE CG  IP  R +  P    C++   
Sbjct: 62  EKDIALNEHSEQLLDEIDNALKAIEEGSYGK--CEVCGTDIPYERLEAIPNARRCIQHAE 119

Query: 64  YQERQRKH 71
            +    K 
Sbjct: 120 EKSVSNKR 127


>UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5D3H2_PELTS
          Length = 242

 Score = 74.4 bits (182), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  I+R   KI         C+ CG  IP  R +  P    C +C+  +
Sbjct: 68  DFALRENAMLAVAAIDRALAKIENGTYGK--CDNCGREIPLERLEAVPSTVCCKKCKEAE 125

Query: 66  ERQRK 70
           E+  +
Sbjct: 126 EKNTR 130


>UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5 Tax=Clostridium
           RepID=A3DD29_CLOTH
          Length = 212

 Score = 74.4 bits (182), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A  V E+  +  IN    K++        CE CG  I E R +  P   LC++C+ 
Sbjct: 61  ELNNALKVHEERLLEDINEALTKMDKGSFGK--CELCGKEIDEERLEALPYTRLCIDCEN 118

Query: 64  YQE 66
            +E
Sbjct: 119 AKE 121


>UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula
           staleyi DSM 6068 RepID=D2R2J7_9PLAN
          Length = 148

 Score = 74.0 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE +   +  E   +  I+   +++ +       CE C  PIP  R +  P   +C++CQ
Sbjct: 53  DEINSQLAEVESRELAHIDTALERMRSGNYGA--CEGCNEPIPLLRLQALPYAVMCIKCQ 110

Query: 63  AYQERQR 69
              E+  
Sbjct: 111 REAEKNG 117


>UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfotomaculum reducens MI-1 RepID=A4J571_DESRM
          Length = 234

 Score = 74.0 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A       T+  I+    K+        +CE C   I + R +  P  T C++C++  
Sbjct: 64  DFALREDAITTLGAIDDALDKMEEGMYG--ICEVCHQEISQDRLEAIPYTTQCIDCKSRD 121

Query: 66  ERQRKHY 72
           E   K +
Sbjct: 122 EHLPKSH 128


>UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 Tax=Roseiflexus
           RepID=A5UPY9_ROSS1
          Length = 121

 Score = 73.6 bits (180), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A     +  +  +N   ++++       +C  CG PIP  R +  P  TLCV CQ+
Sbjct: 56  ERDLALRSNARELLEQVNAALRRLDEGTYG--ICADCGEPIPIERLEALPYATLCVRCQS 113

Query: 64  YQERQRK 70
            +ER R+
Sbjct: 114 TRERARR 120


>UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B6BSH6_9RICK
          Length = 180

 Score = 73.2 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYS-----------VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D+A S             +   ++ I++   +I         C     PI   R  
Sbjct: 98  ADIVDQASSYTDKNVEMKAINRQIKLISEIDKALARIREDIYG--YCLDTAEPIGLKRLM 155

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P     +  Q   E+  K +A
Sbjct: 156 ARPVAKYTIAAQEKHEKDEKVHA 178


>UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=65
           Tax=Betaproteobacteria RepID=Q12EM6_POLSJ
          Length = 450

 Score = 73.2 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  +  I +   +I++       C+  G PI   R  
Sbjct: 369 PDPADRATIEEEHALELRTRDRERKLLKKIEQSIARIDSGDYG--YCDETGEPIGVGRLI 426

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   L +E Q  +E ++K +
Sbjct: 427 ARPTANLSLEAQQRRELKQKMF 448


>UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Halothermothrix
           orenii H 168 RepID=B8CWL7_HALOH
          Length = 228

 Score = 73.2 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D       Q+ +  +     ++      +  CE CG  I E R +  P  TLC  CQA
Sbjct: 60  EKDRGLRDNAQVLLNKVENALNRLEEGNYGL--CEKCGQEIREERLETIPYATLCERCQA 117

Query: 64  YQERQRKHY 72
            +E +  + 
Sbjct: 118 KEEGKDYNR 126


>UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carboxydothermus
           hydrogenoformans Z-2901 RepID=Q3ABZ5_CARHZ
          Length = 213

 Score = 73.2 bits (179), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     +L +  I+     IN     +  C  CG  IP  R    P    CV CQ   
Sbjct: 59  DFALIDNLKLKLRQIDEAIALINQGKYGL--CIDCGQKIPVDRLFANPVAIRCVACQKRV 116

Query: 66  ERQ 68
           E +
Sbjct: 117 EER 119


>UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyces
           RepID=Q9S2X6_STRCO
          Length = 239

 Score = 73.2 bits (179), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A + T +  ++   R   +++A    +  CE CGNPI +AR + FP  TLCVEC+ 
Sbjct: 176 EHELALAATAREVLSQTERALDRLDAGTYGL--CENCGNPIGKARMQAFPRATLCVECKQ 233

Query: 64  YQERQ 68
            QER+
Sbjct: 234 KQERR 238


>UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibrionales
           RepID=A7K6F3_VIBSE
          Length = 208

 Score = 72.9 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I +   KI         CE+CG  I   R +
Sbjct: 67  PDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEDDFG--FCESCGVEIGVRRLE 124

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+   E + K 
Sbjct: 125 ARPTADLCIDCKTLAEIKEKQ 145


>UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7
           Tax=Actinomycetales RepID=A0LTP3_ACIC1
          Length = 527

 Score = 72.9 bits (178), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +   +  +        +I         CE CGNPI + R +  P  TLCV C+ 
Sbjct: 465 EHEMSLANNARDLLVQTEHALARIADGTYGR--CENCGNPINKLRLQANPRATLCVSCKQ 522

Query: 64  YQERQ 68
            +ER+
Sbjct: 523 REERR 527


>UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RK56_MOOTA
          Length = 251

 Score = 72.9 bits (178), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     Q+ +  I    Q I         C  CG  IP  R +  P  TLC+EC+   
Sbjct: 63  DLALRDNVQVQLRKIEDALQSIAEGTYG--YCRRCGREIPRERLEAIPETTLCLECRRKM 120

Query: 66  ERQRKHYA 73
           E +   ++
Sbjct: 121 EGKADKHS 128


>UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 Tax=Clostridia
           RepID=A4XKS6_CALS8
          Length = 209

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +       +  +  I +   KI         C +C   IP  R    P    C+ECQ 
Sbjct: 61  EKNMGLKADMKRKLELIEKALSKIEKGNFG--YCISCKKEIPFDRLLAIPYTEFCIECQK 118

Query: 64  YQERQR 69
             E++ 
Sbjct: 119 DMEKRE 124


>UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobacteria
           RepID=Q1MS84_LAWIP
          Length = 133

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A +             E+  +  I    Q+I+     V  CE CG+ I   R K
Sbjct: 52  ADPADRASAESDRAFTLRIRDRERRLIRKIQSALQRIDDGTYGV--CEDCGDDIGTPRLK 109

Query: 51  IFPGVTLCVECQAYQERQR 69
             P   LC+ C++ QE   
Sbjct: 110 ARPVTKLCINCKSRQEEGE 128


>UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gracilis RM3268
           RepID=C8PIH5_9PROT
          Length = 118

 Score = 72.5 bits (177), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D+ D A               +Q     I    ++I      +  CE+CG  I   R K
Sbjct: 40  ADDFDVASMNTDLSIEYSLNVNQQKAFLEIESALKRIENGTYGL--CESCGEQISLERLK 97

Query: 51  IFPGVTLCVECQAYQERQRK 70
           + P   LC+ C+   E+Q +
Sbjct: 98  VNPEARLCISCKEQAEKQNR 117


>UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium
           Ellin514 RepID=B9XR79_9BACT
          Length = 192

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 10/80 (12%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  ++Q  +  I    ++I  +   V  CE  G PIP+AR +  
Sbjct: 82  MADSGTDNFDRDFALSLLSSDQDAIYEIEEALKRIEKNTYGV--CELTGKPIPKARLEAI 139

Query: 53  PGVTLCVECQAYQERQRKHY 72
           P     V+ QA  E++    
Sbjct: 140 PWTRFTVQAQAQLEKEGALR 159


>UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 Tax=Geobacter
           RepID=B3EAN1_GEOLS
          Length = 218

 Score = 72.1 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A S             E+  +  I+    +I        +CE C   IP  R K+
Sbjct: 120 DIYDQASSERDRELGLLLNDREREKLHSIDEALLRIAEGEYG--ICEECDEDIPMGRLKV 177

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P    CV+C++  E+ +  
Sbjct: 178 LPFTRHCVKCKSDLEKFQAQ 197


>UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB74
           RepID=B5GH83_9ACTO
          Length = 232

 Score = 72.1 bits (176), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A +   +  +    R   +++A    V  CE CG PI +AR + FP   LCV+C+ 
Sbjct: 170 EHELALAAGSRERLEQTERALLRMDAGTYGV--CENCGKPIGKARMQAFPHAILCVDCKQ 227

Query: 64  YQERQ 68
             ER+
Sbjct: 228 KSERR 232


>UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=A1QYW3_BORT9
          Length = 127

 Score = 72.1 bits (176), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A S  E+  +  IN+   +I+ +      C AC   I   R    P   LC+ CQ  +E+
Sbjct: 64  ALSSVEKKKLHLINQALYRISQNTYGN--CLACDKSITRERLVAIPYAFLCISCQTKKEK 121

Query: 68  QRKH 71
           + K 
Sbjct: 122 KGKR 125


>UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2
           Tax=Desulfitobacterium hafniense RepID=B8FT18_DESHD
          Length = 222

 Score = 71.7 bits (175), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A        +  I+   Q+       +  CE C   IP  R +  P  T+C EC   +
Sbjct: 59  DVAIHDRLHHRIQAIDSALQRYEEGKYGL--CEHCQKEIPLGRLEALPFTTVCTECSRLE 116

Query: 66  ERQRKH 71
           E + +H
Sbjct: 117 EMEEQH 122


>UniRef50_Q3ZL39 Putative uncharacterized protein n=1 Tax=Escherichia blattae
          RepID=Q3ZL39_ESCBL
          Length = 76

 Score = 71.7 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+   D A  +  +     +N+  +++         C  C  PIP AR +  P    CV 
Sbjct: 1  MTKAFDRASDLEMEERERLLNKHLRRVKELPESYGFCNDCEQPIPAARLQALPDAVTCVT 60

Query: 61 CQAYQERQRKH 71
          CQA +E +RKH
Sbjct: 61 CQAIREHRRKH 71


>UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Desulforudis audaxviator MP104C RepID=B1I4J4_DESAP
          Length = 212

 Score = 71.7 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A     +  +  +     +++        C+ CG  I   R +  P  T C EC+A  
Sbjct: 67  DFALRENARFRLLAVEDALARMDRGTYGR--CDECGVDIDLERLEAVPFTTKCRECKARA 124

Query: 66  ERQRKH 71
           E + + 
Sbjct: 125 EGKDER 130


>UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 Tax=Dethiobacter
           alkaliphilus AHT 1 RepID=C0GJQ4_9FIRM
          Length = 203

 Score = 71.7 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D +     Q+ +  +    +K++     +  CE CG PIPE R    P    CV+C+   
Sbjct: 62  DISLHEKNQMVLDKVEEALEKLDNDIYGM--CENCGKPIPEERLDALPYAEFCVQCKKKS 119

Query: 66  E 66
           E
Sbjct: 120 E 120


>UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum
           RepID=C6I0P9_9BACT
          Length = 136

 Score = 71.3 bits (174), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M +  D A           +++   ++         CE CG  I E R    P   LC++
Sbjct: 56  MGEGVDLALLEMRNRMKRSVDQALLRLEEGSYGN--CEDCGGEIEEKRLMAMPFAQLCIK 113

Query: 61  CQAYQERQRK 70
           CQ  +E   K
Sbjct: 114 CQRKKEELEK 123


>UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8
           Tax=Deltaproteobacteria RepID=A1AL35_PELPD
          Length = 118

 Score = 71.3 bits (174), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A               E+  +  I     +I++      +CE CG+ I EAR K
Sbjct: 39  PDPTDRATQESDRNFELRIRDRERKLINKIKEALSRIDSGEFG--ICEECGDEIGEARLK 96

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           + P  TLC+ C+   E++ K 
Sbjct: 97  VRPVTTLCINCKLEAEKKEKR 117


>UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomycetales
           RepID=A1SL71_NOCSJ
          Length = 283

 Score = 71.3 bits (174), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + +     +E+  +  I R   +I+     V  CE+CGNPI + R   FP  TLC+ C+ 
Sbjct: 221 DHELTVLNSERDKLAQIERALARIDDGTYGV--CESCGNPIGKMRLMAFPRATLCMTCKQ 278

Query: 64  YQERQ 68
            +ER+
Sbjct: 279 REERR 283


>UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobacteria
           RepID=Q2LSS1_SYNAS
          Length = 150

 Score = 70.9 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 13/80 (16%)

Query: 2   SDEADEA-----------YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A               E+  +  +    ++I+     +  CE CG PI E R  
Sbjct: 69  PDPTDRASLESDRNFELRMRDRERKLIAKMQEAIKRIDEGEFGL--CEVCGGPISEKRLM 126

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  TLC++C+  QE+  K
Sbjct: 127 ARPVTTLCIDCKTKQEKLEK 146


>UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 Tax=Paenibacillus
           RepID=C6D536_PAESJ
          Length = 234

 Score = 70.9 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A    E L +T I++  + ++        C ACG PIP+ R +  P    CVE    Q
Sbjct: 64  DLALLENEDLHLTRISQALEAMDNGTYG--QCRACGKPIPDERLEALPDSLYCVEHAPRQ 121

Query: 66  ERQRKHYA 73
           E   +  A
Sbjct: 122 ETSHRQPA 129


>UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillus
           RepID=Q2B4E3_9BACI
          Length = 252

 Score = 70.9 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           E D+A    +   +  +N+  Q I         C  CG  +P  R +  P    CV+  
Sbjct: 63  EKDQAIEEHQNEELDKVNKALQAIEDGTYGK--CRECGKDLPFERLEAVPTALYCVDHA 119


>UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marine bacterium 311
           RepID=Q6SHS2_9BACT
          Length = 190

 Score = 70.5 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D++D A               E+  +T I++  + ++ H     L   CG  I   R +
Sbjct: 107 ADDSDRATHEEGFTLEIKTRERERKLLTKIDQSVKGLSNHDYGFCLNPNCGVEIGIRRLE 166

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P   LC++C+  +E   K 
Sbjct: 167 ARPTARLCIDCKTLEEITEKQ 187


>UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7QCE7_CATAD
          Length = 275

 Score = 70.5 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A +   +  +    R   ++ A    V  CE+CG P+ + R + FP  TLC+ C+ 
Sbjct: 213 EHEMAIANNAREMLQQTERALARLAADTYGV--CESCGEPVGKYRLQAFPRATLCMSCKQ 270

Query: 64  YQERQ 68
            QER+
Sbjct: 271 KQERR 275


>UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia RepID=Q2GEN7_NEOSM
          Length = 137

 Score = 70.5 bits (172), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D    A        ++ I+   +++         CE  G+ I   R  + P    CV+ Q
Sbjct: 61  DIIMSAQKRN--SLLSEIDEALERMEQGVYG--YCEETGDEIGFGRLDLEPTARYCVDVQ 116

Query: 63  AYQERQRK 70
              +++ +
Sbjct: 117 ERLDKKNR 124


>UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=D2L3E3_9DELT
          Length = 131

 Score = 70.5 bits (172), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 2   SDEADEA-----------YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A               ++  +  IN    ++        +C+ CG  I  AR +
Sbjct: 39  ADVADRATAESDRHLTILMRERDRQLIGEINEALARVKDGDYG--ICQECGEEIGLARLR 96

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TLCV C++  E   + Y
Sbjct: 97  AQPTATLCVHCKSMLEEMGRPY 118


>UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=B8J371_DESDA
          Length = 120

 Score = 70.2 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A +             E+  +  I     +I+       +CE CG+ I   R K
Sbjct: 39  ADPADRATAESDRAFTLRIRDRERRLIRKIQAALTRIDDGTYG--ICEDCGDDISIPRLK 96

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC+ C+A QE      
Sbjct: 97  ARPVTRLCINCKAKQEEDEHLR 118


>UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID=B0SIE7_LEPBA
          Length = 154

 Score = 70.2 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 14/84 (16%)

Query: 1   MSDEADEAYS-----------VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           M D AD A               E  T+  I    +KI        +CE     IP AR 
Sbjct: 52  MGDIADIASELNSEALTSVLTENEIETLREIELALEKIENGTYG--ICEGTKKKIPLARL 109

Query: 50  KIFPGVTLCVECQAYQERQRKHYA 73
           K  P     VE       + ++ A
Sbjct: 110 KAIPWTRFTVEFAEQM-AKSRNRA 132


>UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Heliobacterium
           modesticaldum Ice1 RepID=B0TGP7_HELMI
          Length = 238

 Score = 70.2 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A        +  I + +++I+       +CE C   IP+AR    P  TLC+ECQ+++
Sbjct: 62  DLATRDRFSRELDEIAKAKRRISEGIYG--ICERCHQKIPDARMAAMPTATLCIECQSHE 119

Query: 66  ER 67
           E 
Sbjct: 120 EE 121


>UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfonatronospira thiodismutans ASO3-1
           RepID=C0GTL3_9DELT
          Length = 243

 Score = 70.2 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     +  +  I+    ++        +C++CG  I EAR +  P    C  C    E 
Sbjct: 57  ALDSQARSELNHIDHALDRMIIGNYG--ICDSCGQEISEARLQAVPWARYCRVCVNKAEE 114

Query: 68  Q 68
           +
Sbjct: 115 K 115


>UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria RepID=Q5UF45_9PROT
          Length = 202

 Score = 70.2 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I+   + +  +      CE+CG  I   R +
Sbjct: 121 PDSLDRAAKEEEFMLELRKRERERKLIAKIDLSLKDLEDNLYG--YCESCGVEIGIKRLE 178

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P  T C++C+   E + K 
Sbjct: 179 ARPTATKCIDCKTVDEIKEKQ 199


>UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacteria
           RepID=A4SHJ5_AERS4
          Length = 128

 Score = 70.2 bits (171), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 1   MSDEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           M+DE D A     +             +  +    ++IN        CE+CG+ I   R 
Sbjct: 43  MADEIDRASIEEARRLELNRIEHDKLHLRKLQGALRRINEGDFG--YCESCGDEISLKRL 100

Query: 50  KIFPGVTLCVECQAYQERQRKH 71
           +  P    CVECQ+ +E    H
Sbjct: 101 QARPESRFCVECQSTKEFNDTH 122


>UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 Tax=Akkermansia
           muciniphila ATCC BAA-835 RepID=B2ULP7_AKKM8
          Length = 207

 Score = 69.8 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 4   EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + D A S+   EQ  +  I +   +I+       +CE     IP  R +  P   L VEC
Sbjct: 110 DRDFALSLLSKEQDGLYEIEQALARIDNGTYG--ICEMSYKVIPILRLEAIPFARLTVEC 167

Query: 62  QAYQERQRKHYA 73
           QA  E+++   A
Sbjct: 168 QAQWEKEKGQNA 179


>UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermosinus
           carboxydivorans Nor1 RepID=A1HSA8_9FIRM
          Length = 227

 Score = 69.8 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  +    +K+ A      +C+ CG  I   R +  P    C+ C+   
Sbjct: 63  DLALRDNAHLLLEQVEHALEKVAAGNYG--ICDNCGREIGIERLQAIPYAARCIVCEKKY 120


>UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfotomaculum acetoxidans DSM 771
           RepID=C8W4E4_DESAS
          Length = 231

 Score = 69.8 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D A      L +  +    + I        +C+ CG  I  AR    P  TLC EC+  Q
Sbjct: 63  DFALRDDAMLKIRAVEDALKNIEMGKYG--ICDICGKEIGYARLTALPRTTLCKECKEAQ 120

Query: 66  ER 67
           ER
Sbjct: 121 ER 122


>UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gammaproteobacteria
           RepID=A5EW31_DICNV
          Length = 143

 Score = 69.8 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A    E           +  +  I++  ++I         CE C   I   R +
Sbjct: 58  ADLNDRASQEEEFSLELRTRDRERKLLRKIDKALERIKQGHFG--YCEQCDEEIGFHRLE 115

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC++C+   ER+ K +
Sbjct: 116 ARPTAELCIDCKHLAERKEKSF 137


>UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas
           acidaminovorans RepID=B0VG86_9BACT
          Length = 148

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              +E+  +  +N   Q+I+       +CE CG  I E R +I P  T CV C+   E +
Sbjct: 85  MLESEREKIRQLNEALQRISDGTYG--ICEFCGEFIQENRLEIIPYATCCVACKEKNEDK 142

Query: 69  RKH 71
           ++ 
Sbjct: 143 KRR 145


>UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 Tax=Victivallis
           vadensis ATCC BAA-548 RepID=D1N407_9BACT
          Length = 133

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 1   MSD--------EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D        E +      E   +  I    +++         C+ CG PI E R  I 
Sbjct: 54  MADVSSDNSRHEMELQLLSEEGDVLRLIEDAIKRLVDGEYGK--CQECGEPISEGRLAIR 111

Query: 53  PGVTLCVECQAYQERQRKH 71
           P    CV+C+   E+Q  H
Sbjct: 112 PYAVYCVKCKEMHEKQGWH 130


>UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacteria
           RepID=A8PLZ9_9COXI
          Length = 295

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 13/82 (15%)

Query: 1   MSDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           + D +D A    E           +  +  I     +++        C +CG  I   R 
Sbjct: 213 LPDMSDRATQEEEFNLELRARDRERKLIKKIEDALHQLDEGHYG--FCSSCGVEIGIRRL 270

Query: 50  KIFPGVTLCVECQAYQERQRKH 71
           +  P   LC++C+   E + K 
Sbjct: 271 EARPTANLCIDCKTLDEIREKQ 292


>UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0ZG84_BREBN
          Length = 257

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           E D A    ++ T+  I++  Q++      +  C  CG  IP  R +  P    C E  
Sbjct: 63  EKDLALDSLDRETLKEIDQALQRMEEGTYGL--CTVCGEQIPVERLEALPQSQTCKEHA 119


>UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253H0_CHLFF
          Length = 124

 Score = 69.8 bits (170), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 2   SDEADEAYSVT----EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           +D  D   S+     E   +  INR  +KI        +C+  G  IP AR    P  T+
Sbjct: 51  TDTFDRTISLEVTTKEYELLRQINRALEKIEESSYG--ICDVSGEEIPLARLMAIPYATM 108

Query: 58  CVECQAYQERQ 68
            V+ Q+  E+ 
Sbjct: 109 TVKAQSQFEKG 119


>UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 Tax=Myxococcales
           RepID=D0LZD2_HALO1
          Length = 124

 Score = 69.4 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 13/83 (15%)

Query: 1   MSDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           ++DE D A S             E+  +  ++   +K+        +CE C  PI + R 
Sbjct: 43  LADEMDLASSESYQSFEFRLRGREKSLLNKLDLALRKLGEGTFG--ICEVCEEPIGKKRL 100

Query: 50  KIFPGVTLCVECQAYQERQRKHY 72
           +  P  TLC++C+  QER  + +
Sbjct: 101 EARPETTLCIQCKEAQERDERVF 123


>UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solanacearum UW551
           RepID=A3RXC3_RALSO
          Length = 224

 Score = 69.4 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  +  + +  Q+I+        C+  G PI   R  
Sbjct: 143 PDPADRATIEEEHALELRTRDRERKLLKKVEQSIQRIDEGNYG--YCDETGEPIGVPRLL 200

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q  +E+++K +
Sbjct: 201 ARPTATLTLEAQERREKRQKLF 222


>UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788757
          Length = 187

 Score = 69.4 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           D A   T +  +  I+   Q+++        C  CG  IP  R +  P    C+E
Sbjct: 66  DLAIQETLERELEQIDAALQRMDQGEYGT--CAECGREIPYERLEALPYTAYCLE 118


>UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10
           Tax=Thermoanaerobacteraceae RepID=B0K2T3_THEPX
          Length = 206

 Score = 69.4 bits (169), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A    E+  +  I    +++        +C  C  PI E R +  P   LC EC  
Sbjct: 63  EKNYALKDNEKYILRQIEDAFKRMEIGTYG--ICAHCHKPIEEERLEALPYTVLCAECAK 120


>UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20
           RepID=Q30V43_DESDG
          Length = 149

 Score = 69.0 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D A        +  +     +I   G     CE CG+ I EAR K  P  TLC+ CQ  
Sbjct: 75  LDVALRGRLARQLAAVESALHRIATGGFGR--CEECGDEIGEARLKANPTTTLCIHCQED 132

Query: 65  QERQRKHY 72
           +E +    
Sbjct: 133 REAEAARR 140


>UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68
           Tax=Alphaproteobacteria RepID=A7HW84_PARL1
          Length = 146

 Score = 69.0 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A S TE+              + I+   ++I+        CE  G PI   R  
Sbjct: 64  PDIADRASSETERSLELRTRDRQRKLVSKIDAAIRRIDEGTYG--YCEETGEPISLKRLD 121

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E Q   ER+ K Y
Sbjct: 122 ARPIATLSIEAQERHERREKVY 143


>UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35 Tax=Proteobacteria
           RepID=B4SQA3_STRM5
          Length = 405

 Score = 69.0 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEA+ A   TE           +  +  I+   +++ A       C   G  I   R + 
Sbjct: 325 DEAERATRETENSLELRTRDRYRKLIGKIDSTLKRLEAGDYG--YCVDTGEEIGLERLEA 382

Query: 52  FPGVTLCVECQAYQERQRKH 71
                  ++ Q   E  +K 
Sbjct: 383 RLTAERTIDAQERWEHLQKQ 402


>UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A2J0_NATTJ
          Length = 216

 Score = 69.0 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           E D   S   +  +  I    +KI         CE+CG  I   R    P    C+ C
Sbjct: 60  EKDTTLSNLREQKLREIEIALEKIANGDYGK--CESCGKEINNERLDAVPYTRYCISC 115


>UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family protein n=1
           Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX5_9PROT
          Length = 123

 Score = 69.0 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D      E+  +  I++  ++I         C+ACG PI   R +  P  TLC+EC+  
Sbjct: 56  FDLKIKDRERRLIKKIDQAIERIQNGEFG--ECDACGGPISVKRLEARPVTTLCIECKTA 113

Query: 65  QERQRKHY 72
           QE++ +  
Sbjct: 114 QEQEERTR 121


>UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Thermodesulfovibrio
           yellowstonii DSM 11347 RepID=B5YK78_THEYD
          Length = 123

 Score = 69.0 bits (168), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 2   SDEADEA----YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           S E D +        E+  +  I +  +KIN       +CEACG  IP  R +  P   L
Sbjct: 49  SQEIDRSFLLRLRDRERKLLKKIEKTLEKINNGTYG--ICEACGAEIPIERLEARPVTDL 106

Query: 58  CVECQAYQERQRK 70
           C+EC+  QE   K
Sbjct: 107 CIECKTEQEEAEK 119


>UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ESP2_OCEIH
          Length = 224

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D A     +  +  IN     I        +C  CG  IP  R +  P    CV+   
Sbjct: 62  EKDIALQEHTEKELEDINAALHAIEEGTYG--ICTVCGEDIPHERLEAIPTTDRCVKHAN 119

Query: 64  YQERQRKHY 72
             E  R+ Y
Sbjct: 120 --EGGRERY 126


>UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14 Tax=Bacillaceae
           RepID=C9S0U4_GEOSY
          Length = 269

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A     +  +  I R    I         C  CG PIP  R +  P    C E
Sbjct: 63  EKDLALKEHAERELREIERALGAIADGTYGT--CRVCGRPIPYERLEALPTTLYCRE 117


>UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3 Tax=Comamonadaceae
           RepID=Q221D7_RHOFD
          Length = 124

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + E + A    +   +  ++   ++I      +  C  CG  IP AR    P    C+ C
Sbjct: 55  ARELEFALDARDSEELDRLDAALRRIEDGSYGL--CVDCGVGIPAARLHAAPDALRCIAC 112

Query: 62  QAYQERQRKHYA 73
           Q   E+ +   A
Sbjct: 113 QEKLEKAQARQA 124


>UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermobaculum
           terrenum ATCC BAA-798 RepID=D1CBT8_THET1
          Length = 126

 Score = 68.6 bits (167), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A     +  +  I    ++++       +C  CG  IP  R    P    CV  Q 
Sbjct: 62  EKEIALQRNLRSVLNEIEAALKRMDEGTYG--ICIDCGQEIPIERLMARPYAVRCVADQE 119

Query: 64  YQERQRK 70
             +R  +
Sbjct: 120 KYDRVHR 126


>UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID=B2S244_TREPS
          Length = 120

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 2   SDEADEAYSVT----EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTL 57
           SD+ D     +    +   +  I     +I         C  CG  IPE R +  P   +
Sbjct: 48  SDDMDRKMLESLSAKDLRCLQQIESALLRIEQGRYGK--CADCGESIPEDRLRAIPYSLM 105

Query: 58  CVECQAYQERQRKHY 72
           C+ECQ+ +E +R+ +
Sbjct: 106 CIECQSARESKRRAF 120


>UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastopirellula marina DSM
           3645 RepID=A3ZQT2_9PLAN
          Length = 134

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE     +  E   +  I++  ++I         CE C   IP AR +  P  TLC++CQ
Sbjct: 54  DELSSQLAEVESRELAQIDKALERIRGGSFG--ECEGCTCKIPTARLQALPYATLCIKCQ 111

Query: 63  AYQERQR 69
              E   
Sbjct: 112 RELEELG 118


>UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q9W6_SULNB
          Length = 118

 Score = 68.6 bits (167), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D A    ++  +  I+    KI        +CE C  PI +AR ++      C+ C+  
Sbjct: 55  VDSAILEQQRKELAEIDLALDKIKNGTYG--ICEMCEEPIGKARLEVKNFARFCITCREI 112

Query: 65  QERQRK 70
            E++++
Sbjct: 113 NEKEQQ 118


>UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopirellula baltica
           RepID=Q7UR73_RHOBA
          Length = 140

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE +      E   +  I     +          CE CG PIP  R K  P    C+ C+
Sbjct: 53  DELNSQLVEVESRELLAIEEAIARFEEGRFG--DCEDCGKPIPLNRLKAIPYAVDCINCR 110

Query: 63  AYQERQ 68
              ER+
Sbjct: 111 RAAERE 116


>UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3 Tax=Clostridium
           RepID=A0Q071_CLONN
          Length = 206

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A    E   +  I+     +        +C  C N IP+ R +  P    CV C+  Q+
Sbjct: 64  IALEKAELEKLHEISESLYDMEHGTYG--ICRICKNQIPDDRLEAVPYAKYCVHCKNNQD 121

Query: 67  R 67
           +
Sbjct: 122 K 122


>UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 Tax=Opitutaceae
           RepID=B1ZV03_OPITP
          Length = 297

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 10/79 (12%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  +EQ  +T I+   ++I+       +CE    PI + R    
Sbjct: 195 MADAGTDTFDRDFALSLVSSEQEALTEIDAAIKRIHDGTYG--ICEITQKPIAKERLLAV 252

Query: 53  PGVTLCVECQAYQERQRKH 71
           P      E Q   E+ R  
Sbjct: 253 PFTRYSAEAQKDLEKNRYR 271


>UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1AEE3_THECD
          Length = 114

 Score = 68.2 bits (166), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            D+     +   + T+  I     ++      +  CE CG PIPE R +I P    CV C
Sbjct: 49  PDDTALVQADALRQTLEDIEEALLRLRQGRYGL--CEKCGKPIPEGRLEILPYARCCVSC 106

Query: 62  QAYQ 65
           Q  +
Sbjct: 107 QQRR 110


>UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificaceae
           RepID=Y250_AQUAE
          Length = 145

 Score = 68.2 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            S  E  T+  I+   +KI        +CE CG  IPE R    P    C +C    ER+
Sbjct: 60  LSNVEIATLREIDYALEKIEKGTYG--ICERCGEEIPEPRLCAIPWTRYCAKCAEEVERE 117

Query: 69  RKHY 72
              Y
Sbjct: 118 SGTY 121


>UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YTEA B.subtilis
           ortholog n=1 Tax=Clostridium acetobutylicum
           RepID=Q97H97_CLOAB
          Length = 200

 Score = 68.2 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
            A+   E+  +  I     K+   G    +CE CG PI E R +  P    CVECQ   
Sbjct: 64  MAFRKNEEALLNKIGNAIDKVEHGGYG--ICEVCGKPISEERLEFVPYAENCVECQNKL 120


>UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 Tax=Proteobacteria
           RepID=B5EG80_GEOBB
          Length = 118

 Score = 68.2 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A               E+  +  I     +I A      +CE C   I EAR K
Sbjct: 39  PDPTDRATQESDRTFELRIRDRERKLIVKIQEALARIEAGTFG--ICEVCEEDISEARLK 96

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  TLC++C+  QE++ +
Sbjct: 97  ARPVTTLCIDCKMEQEKKER 116


>UniRef50_P41059 Uncharacterized 8.5 kDa protein in gpA 5'region n=40 Tax=root
          RepID=CP80_BP186
          Length = 75

 Score = 68.2 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A    ++     I+  R + +   +  ++CE C  PIPEARR+  PGV  CV 
Sbjct: 1  MADAMDLAQLREQEDRERHISNARSRRHE--VSAFICEECDAPIPEARRRAIPGVQCCVT 58

Query: 61 CQAYQERQRKHY 72
          CQ   E + KHY
Sbjct: 59 CQEILELKSKHY 70


>UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteobacteria
           RepID=DKSA_HAEIN
          Length = 145

 Score = 68.2 bits (166), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A    E           +  M  I    +K++        C+ CG  I   R +
Sbjct: 64  PDPADRATQEEEFSLELRNRDRERKLMKKIEATLKKLDTDDFG--YCDCCGEEIGIRRLE 121

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P   LC++C+   E + K  A
Sbjct: 122 ARPTADLCIDCKTLAEIREKQVA 144


>UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q021M5_SOLUE
          Length = 143

 Score = 67.8 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQLT-MTGIN----------RIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D     TE+   +  I              Q+I      V  C  C N IP  R K
Sbjct: 54  ADSLDRIQHATEREMAIRRIELDFSKVQSVRSALQRIAEGTYGV--CSECDNEIPGKRLK 111

Query: 51  IFPGVTLCVECQAYQERQR 69
             P    C++CQ   +R+R
Sbjct: 112 AVPWTPYCLDCQDSADRRR 130


>UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovibrio yellowstonii
           DSM 11347 RepID=B5YGE3_THEYD
          Length = 129

 Score = 67.8 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           +S++       T +  +  I    +K+        +CE CG+ IPE R KI P    C +
Sbjct: 56  LSEDISLKQLSTHRDILKKIEEALRKLEEGTYG--ICEMCGDEIPEERLKILPFAIYCRD 113

Query: 61  CQAYQERQRK 70
           CQ   E   K
Sbjct: 114 CQEKIEMIEK 123


>UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus
           Koribacter versatilis Ellin345 RepID=Q1IJ15_ACIBL
          Length = 121

 Score = 67.8 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E     S  ++  +  +     +I         C +CG+ I   R +  P    C+ CQ 
Sbjct: 53  EFLFTQSANDRNLLQMVEGALIRIGEGTYG--ECVSCGSEINSKRLEAVPWARYCIGCQE 110

Query: 64  YQERQR 69
             E+  
Sbjct: 111 KIEKGE 116


>UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemmata obscuriglobus UQM
          2246 RepID=UPI00016C4B65
          Length = 95

 Score = 67.8 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +  E   +  I R  +++ A       CE C   IP AR    P  T CV+CQ   ER 
Sbjct: 1  MAELEAKELAQIERALRRLKAGTYGK--CEVCSIKIPVARLNALPFSTFCVDCQREMERD 58

Query: 69 R 69
           
Sbjct: 59 G 59


>UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bilis ATCC 43879
           RepID=C3XG00_9HELI
          Length = 122

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D++     Q  M  I+    K +       +CE C + I   R +  P    C+ C+  
Sbjct: 54  FDDSMLERNQKEMKEISASLAKFDDGIYG--ICEMCEDEIGIERLQAKPHARFCINCREI 111

Query: 65  QERQRKH 71
            E+  K 
Sbjct: 112 YEKSEKQ 118


>UniRef50_A1JNK3 Hypothetical 8.2 kDa protein in gpa 5'region (Conserved
          hypothetical phage protein) n=1 Tax=Yersinia
          enterocolitica subsp. enterocolitica 8081
          RepID=A1JNK3_YERE8
          Length = 74

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D A    E L    I + R K        ++C +C   IPE RR   PGV  CV 
Sbjct: 1  MPDLMDIAQERQEMLLAMQIAKARSKP--ITASAFICASCEAEIPEQRRITVPGVIFCVA 58

Query: 61 CQAYQERQRKHY 72
          CQ   E ++KHY
Sbjct: 59 CQQLHEEKKKHY 70


>UniRef50_UPI0001827371 putative prophage protein n=1 Tax=Enterobacter cancerogenus ATCC
          35316 RepID=UPI0001827371
          Length = 73

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A +  ++     I+  R++        +LCE C  PIPEARR   PGV LC+ 
Sbjct: 1  MADFIDLAQAREQEDRERHIHHARRRPA--SPSRFLCEECDAPIPEARRMAVPGVALCIT 58

Query: 61 CQAYQERQRKH 71
          CQ   E + KH
Sbjct: 59 CQEIAEMKNKH 69


>UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2
           Tax=Planctomycetaceae RepID=D2R7B0_9PLAN
          Length = 123

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 10/73 (13%)

Query: 1   MSD--------EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D        E   +    +  T+  I    ++I A    V  C  CG  IP+AR ++ 
Sbjct: 50  MADVGTDNFEQEFTLSLMEHDGSTLEQIEAALERIEAGAYGV--CTECGCKIPKARLEVL 107

Query: 53  PGVTLCVECQAYQ 65
           P    CV+C    
Sbjct: 108 PYTAHCVKCAEKA 120


>UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria RepID=Q3A0W2_PELCD
          Length = 118

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A               E+  +  I +  ++I         CE C  PI   R +
Sbjct: 39  PDPTDRASLESDRNFELRIRDRERKLIMKIRQALERIEQGTFG--ECECCEEPIGAERLR 96

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  TLC++C+  QER+ K
Sbjct: 97  ARPVTTLCIDCKTEQERKEK 116


>UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Termite group 1
           bacterium phylotype Rs-D17 RepID=B1H0G2_UNCTG
          Length = 119

 Score = 67.5 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE D A   +E+             +  IN    KI  +      CE C N I   R K+
Sbjct: 41  DEIDTASQNSEKEMYFELVASDKMTLDAINDALVKIEKNAYGK--CEGCSNNILLERLKV 98

Query: 52  FPGVTLCVECQAYQE 66
            P    C++CQ   E
Sbjct: 99  IPWAKYCIQCQEESE 113


>UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio
           RepID=D2L9K5_9DELT
          Length = 120

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D AD A + +++             +  I     +I+        C  CG  I  AR K
Sbjct: 39  ADPADRATAESDRAFTLRLRDRERRLIKKIKEALDRIDEGTYG--ECVECGEDISVARMK 96

Query: 51  IFPGVTLCVECQAYQERQR 69
             P  TLC++C++ QE   
Sbjct: 97  ARPVTTLCIKCKSRQEADE 115


>UniRef50_A3YA40 C4-type zinc finger protein, DksA/TraR family protein n=1
          Tax=Marinomonas sp. MED121 RepID=A3YA40_9GAMM
          Length = 73

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI----PVYLCEACGNPIPEARRKIFPGVTLC 58
          DE D A    +      I    ++ +            C  CG  IP  R K  P V  C
Sbjct: 2  DEFDHAQQQEQAFRDKAIAHQLKQPSETPYEDEDGYRYCLDCGQDIPLKRIKALPHVVRC 61

Query: 59 VECQAYQER 67
          V CQ  +ER
Sbjct: 62 VSCQDKKER 70


>UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae RepID=Q2GI38_EHRCR
          Length = 152

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A                +  +  IN+  Q+I+        CE  G  I  AR +
Sbjct: 57  ADLTDMATKEHNIVLILNTRKRNEALIIEINKAIQRIDDGLYG--YCEETGEKIGIARLE 114

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P     +E Q  +E+Q+K Y+
Sbjct: 115 ANPITLYSIEEQERREKQQKLYS 137


>UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria RepID=DKSA_ECO57
          Length = 151

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A    E           +  +  I +  +K+         CE+CG  I   R +
Sbjct: 70  PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFG--YCESCGVEIGIRRLE 127

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P   LC++C+   E + K  A
Sbjct: 128 ARPTADLCIDCKTLAEIREKQMA 150


>UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LGY5_SYNFM
          Length = 257

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
                +  +  I+    KI        +CE+CG+ I   R +  P   LCV+C    E++
Sbjct: 56  LDANRKKEVEQIDLALGKIAIGEYG--ICESCGDDIALKRLEAIPWARLCVDCARDFEQR 113

Query: 69  R 69
            
Sbjct: 114 H 114


>UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WW56_ALIAD
          Length = 213

 Score = 67.1 bits (163), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
            + ++  +  +     +I         CE+CG PIP  R +  P    CV+C+   E ++
Sbjct: 65  RLRDERALADVEDALSRIRQGTYG--QCESCGRPIPPDRLEAIPTTRRCVDCEREVEARQ 122


>UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 Tax=Chthoniobacter
           flavus Ellin428 RepID=B4D2T0_9BACT
          Length = 187

 Score = 66.7 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +DE+       +Q  +  IN    KI      V  CE  G PIP  R K  P      E 
Sbjct: 83  ADES-RGVLSHDQDLLVEINHALSKIEEGTYGV--CELTGQPIPAERLKAVPWARFTREA 139

Query: 62  QAYQERQR 69
           QA  E + 
Sbjct: 140 QAEFEARG 147


>UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1 Tax=Thiomicrospira
           crunogena XCL-2 RepID=Q31G85_THICR
          Length = 142

 Score = 66.7 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D +D A    E           +  ++ I++  + I         C+  G  I  AR +
Sbjct: 61  ADPSDRASQEEEFALELRTRDRERKLISKIDKSLRDIEDGDYG--YCKMSGEEIGLARME 118

Query: 51  IFPGVTLCVECQAYQERQRKH 71
             P  TL VE +  QE + K 
Sbjct: 119 ARPTATLTVEMKTKQEMREKQ 139


>UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA
           RepID=C1I8K1_9CLOT
          Length = 204

 Score = 66.7 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           E   A    E+  +  I+   + I+        C+ CG  I + R    P    C+EC
Sbjct: 61  EKGRALEANERALLDKIDDAVRAIDEGSYGK--CQKCGKEIDKERLDFLPYALNCIEC 116


>UniRef50_A2I309 Conjugative transfer protein n=1 Tax=Vibrio phage VP882
          RepID=A2I309_9CAUD
          Length = 73

 Score = 66.7 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSD AD+A  V EQ     +   +  IN        C+ C + IPEARR+  PGV LCV+
Sbjct: 1  MSDIADQAQDVIEQHLTASLANRKHNINPAIPSAKHCDDCESEIPEARRRSLPGVRLCVD 60

Query: 61 CQAYQERQRKH 71
          C + QE + +H
Sbjct: 61 CASLQEIKGRH 71


>UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter butzleri RM4018
           RepID=A8EWK7_ARCB4
          Length = 123

 Score = 66.7 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
            +   +  I    +KI        +C+ CG  IP  R K  P    C EC+   E++ 
Sbjct: 62  HQLDELKQIEEALKKITLGTYG--ICDMCGINIPLGRLKAKPFAKFCTECRTVYEQEN 117


>UniRef50_D2BWU8 Transcriptional regulator, TraR/DksA family n=4
          Tax=Enterobacteriaceae RepID=D2BWU8_DICD5
          Length = 69

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M DE D      EQ     I + R K       ++ C  CG PIPE RR+  PGVT C E
Sbjct: 1  MPDEIDRDQEFNEQRLEEMIEQNRFKPAT-TPSLHYCRLCGEPIPEKRRQTLPGVTTCTE 59

Query: 61 CQAYQERQRK 70
          CQA  ER+++
Sbjct: 60 CQAIIERRQR 69


>UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1 Tax=Acidobacterium
           capsulatum ATCC 51196 RepID=C1F3S7_ACIC5
          Length = 139

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D AD+A    +Q             ++ +    +++         C  CG  I   R + 
Sbjct: 56  DPADQAVMSYQQELIFSQGTNKHTQLSLVRLALERLEDGSYG--ECAECGEDISPRRLEA 113

Query: 52  FPGVTLCVECQAYQE 66
            P    C+ CQ   E
Sbjct: 114 VPWTPYCISCQEKVE 128


>UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp.
          128-5-R1-1 RepID=A8V318_9AQUI
          Length = 133

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 18 TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
            I+   ++I+        CE CG PI E R +  P  TLC E     E+
Sbjct: 51 KKIDEALERISEGTYG--YCEVCGKPIEEERLEAIPWTTLCTEHAKEAEK 98


>UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera araneosa HTCC2155
           RepID=A6DK24_9BACT
          Length = 147

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +      E + +  + +  ++++        C  C + IPEAR    P   LCV C+ 
Sbjct: 69  EINLNVMSDEGIKVQLVQQAIERLDEGKYGR--CVDCRDDIPEARLDAIPYAKLCVACKE 126

Query: 64  YQERQR 69
            +E Q 
Sbjct: 127 TRESQG 132


>UniRef50_B3QCL2 Transcriptional regulator, TraR/DksA family n=14
          Tax=Proteobacteria RepID=B3QCL2_RHOPT
          Length = 73

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ DEA ++ E+     I R   +I   G     C  CG PI EARRK  P  T CV+
Sbjct: 1  MTDQLDEAQALEERERDDCIARAAGQIK--GHGATHCVVCGEPIDEARRKAMPSATRCVD 58

Query: 61 CQAYQERQRKHY 72
          CQ  +ER  + +
Sbjct: 59 CQESRERWSRSH 70


>UniRef50_C6MQY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Geobacter sp.
          M18 RepID=C6MQY5_9DELT
          Length = 74

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE D A  ++E+     +             +  CE CG PIPE RR+  PG T CV 
Sbjct: 1  MADEIDLAQEISERHLEAALAGHLDH-KPAAESLTHCEECGRPIPEGRRQAQPGCTRCVR 59

Query: 61 CQAYQE 66
          CQ+  E
Sbjct: 60 CQSGIE 65


>UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01TC0_SOLUE
          Length = 136

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLT-----------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D +   T               +  ++   ++I         C  CG PI  AR + 
Sbjct: 53  DPLDRSVDDTAADEGLHNSSVDSETLQQVDDALRRIEQGSYGK--CVICGKPIEPARLEA 110

Query: 52  FPGVTLCVECQAYQE 66
            P    C   Q   E
Sbjct: 111 IPWTPYCKADQERLE 125


>UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus subtilis group
           RepID=YTEA_BACSU
          Length = 239

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
           E D A  + E+  +  I    + I        +CE  G  IP  R +  P  T
Sbjct: 63  EKDIALDLHEREHLRDIEHSLKAIENGTYG--ICEVSGKEIPFERLEALPTAT 113


>UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus
          RepID=A8FE57_BACP2
          Length = 135

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          ++     +      I+   +++        +CE  G  IP  R K  P     ++ +  +
Sbjct: 29 EQTLDQVDDQLEAEIDAALKRMEDGTYG--ICEKTGKEIPYERLKAVPYTRYSIDAKKNE 86

Query: 66 ERQR 69
          E  +
Sbjct: 87 ETTQ 90


>UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 Tax=Geobacter
           RepID=C6E710_GEOSM
          Length = 130

 Score = 66.3 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M  +A  A +   +  +T +   ++++         CE CG  I   R ++ P    CV 
Sbjct: 57  MLSDAGLAIADIRRNQLTALEEAQRRVEQGTYGK--CENCGEVIDIQRLRLMPFAAYCVS 114

Query: 61  CQAYQERQRK 70
           CQ  +E   K
Sbjct: 115 CQKEKEGPGK 124


>UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX4_9PROT
          Length = 116

 Score = 65.9 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
           ++  +  I    ++I        +CE C  PI E R KI P    C+ C+   E++ K
Sbjct: 61  QKQELKEIEEALKRIEEGSYG--ICEMCDEPIQEERLKIKPYAKYCIICREIIEKEEK 116


>UniRef50_C0QW50 DNA-binding transcriptional regulator of transcription, DnaK
           suppressor protein n=2 Tax=Brachyspira
           RepID=C0QW50_BRAHW
          Length = 121

 Score = 65.9 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
           S  E+  +  +N   ++I         C  C   I E R    P    CV C +  E ++
Sbjct: 59  SQKEKDKLDMLNNALKRIEEGTYGK--CIDCKEEINEERLTALPYTLRCVNCMSKYEDKK 116

Query: 70  KH 71
           + 
Sbjct: 117 RR 118


>UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subtilis group
           RepID=G16O_BACSU
          Length = 163

 Score = 65.9 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           D+     ++  +  +NR  QK+      V  CE  G  IP  R +  P   + VE QA  
Sbjct: 60  DQTVKEIDRELLEEVNRALQKMKDGTYGV--CEKTGQEIPYERLEAVPYARMTVEAQADV 117

Query: 66  E 66
           E
Sbjct: 118 E 118


>UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 Tax=Aquificaceae
           RepID=B4U7Z4_HYDS0
          Length = 118

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             E   +  I     +I         CE CG  IP  R K  P  ++C+ C+  +E   
Sbjct: 60  DRETKLLKKIEYTLARIENGTYG--YCEVCGAEIPYERLKARPVTSMCIRCKELEEENE 116


>UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 Tax=Streptomyces
           RepID=D1X2L9_9ACTO
          Length = 248

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +   Q  +    R   ++ A    +  CE CG PI +AR + FP  TLCVE + 
Sbjct: 185 EHELSLAANAQEMLEQTERALARLEAGTYGL--CEICGKPIGKARMQAFPRATLCVEDKQ 242

Query: 64  YQERQR 69
            QER+ 
Sbjct: 243 KQERRG 248


>UniRef50_C9XYU8 Uncharacterized 8.5 kDa protein in gpA 5'region n=4
          Tax=Enterobacteriaceae RepID=C9XYU8_CROTZ
          Length = 74

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D      E+     I++ R +        +LCE+C  PIPEARR   PGV LCV 
Sbjct: 1  MADVMDLVQQRVEEERERHIHKARSR--QAAPSRFLCESCNGPIPEARRAALPGVELCVT 58

Query: 61 CQAYQERQRKHY 72
          CQ  +E +  HY
Sbjct: 59 CQEIKELKSLHY 70


>UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q029W8_SOLUE
          Length = 149

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 22/75 (29%), Gaps = 13/75 (17%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D +    E              +  I     +++     V  C  C  PI   R  
Sbjct: 59  SDEGDLSQQHHEEWIFLNRNTIDMKLLREIADALHRMDTGHYGV--CPECEEPISAKRLD 116

Query: 51  IFPGVTLCVECQAYQ 65
             P    CV CQ   
Sbjct: 117 AVPWARYCVTCQEKI 131


>UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID=C6J3C7_9BACL
          Length = 245

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           D A +   +L +  +    ++I         C  CG PI   R +  P    C +
Sbjct: 66  DLALAEHHELHLARVEDALERIEDGSYG--YCATCGKPISYERLRAIPETAYCKD 118


>UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396
           RepID=Q2SPR7_HAHCH
          Length = 107

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+   A  V  ++ +  + +  Q++      V  C ACG  IPE+R ++ P   LCV C 
Sbjct: 46  DDVLNALKVETEIEINQVKKALQRLQQGEYGV--CVACGEDIPESRLQVLPFAELCVSCA 103

Query: 63  AYQE 66
           +  E
Sbjct: 104 SKSE 107


>UniRef50_Q65AH5 TraR protein n=4 Tax=Enterobacteriaceae RepID=Q65AH5_YERPE
          Length = 88

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 34/72 (47%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE D      E L    I   RQ+    G     CE CGN IP  R++  PGV  C E
Sbjct: 15 MADELDLLQEQDELLNQLHIQAARQRSCLEGKSRKRCECCGNRIPLRRQQAIPGVRTCTE 74

Query: 61 CQAYQERQRKHY 72
          CQ   E ++K Y
Sbjct: 75 CQRVLEIRQKQY 86


>UniRef50_Q7N7S5 Similar to unknown protein n=1 Tax=Photorhabdus luminescens
          subsp. laumondii RepID=Q7N7S5_PHOLL
          Length = 83

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 1  MSDEAD--EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MSD+ D   A +VT       I  +R++++   + +  CE CG+ I E RR+I PGV LC
Sbjct: 1  MSDDIDDTRAQAVTAMWLEEQIAVVRREMHTGRVSLKYCEGCGDRIDEQRRQILPGVQLC 60

Query: 59 VECQAYQERQRKHY 72
          V CQ   E   +  
Sbjct: 61 VGCQEVAEHWEQVR 74


>UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 Tax=Nautilia
           profundicola AmH RepID=B9L783_NAUPA
          Length = 117

 Score = 65.9 bits (160), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)

Query: 3   DEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEAD A +             ++  +  IN   +KI+       +CE C +PI EAR KI
Sbjct: 41  DEADFAAASMDSGRDYQIYINQKKELEEINDALKKIDEGTFG--ICEMCEDPIQEARLKI 98

Query: 52  FPGVTLCVECQAYQERQRK 70
            P    C+ C+   E++ K
Sbjct: 99  KPYAKYCIICREIIEKEGK 117


>UniRef50_Q125W5 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
          sp. JS666 RepID=Q125W5_POLSJ
          Length = 79

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGI------PVYLC--EACGNPIPEARRKIF 52
          M D+ D A    +      +     +                C  + CG PIPE RRK  
Sbjct: 1  MPDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKAL 60

Query: 53 PGVTLCVECQAYQERQRKH 71
          PGV  CVECQ   E++   
Sbjct: 61 PGVKFCVECQQRLEKKGMR 79


>UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium
           DG1235 RepID=B5JMU6_9BACT
          Length = 280

 Score = 65.5 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 10/75 (13%)

Query: 1   MSD------EADEAYSV--TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A S+  +EQ  +  I     +I        +CE  G  I E R    
Sbjct: 176 MADAGTDTFDRDFALSMVSSEQDALQEIEEAIDRIFKGTYG--ICEMTGKQIREERLMAV 233

Query: 53  PGVTLCVECQAYQER 67
           P     ++ Q   E+
Sbjct: 234 PFTRYSMKTQEQIEK 248


>UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacter
           RepID=Q7VGT4_HELHP
          Length = 118

 Score = 65.5 bits (159), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            +       +  +  I    QKI      V  CE C + I   R K+ P    C+ C+  
Sbjct: 52  LEMGMIDLYKDEIKDIRNALQKIKDGTFGV--CEMCDDEIDVERLKVKPHAKYCINCREL 109

Query: 65  QERQRK 70
            E+ +K
Sbjct: 110 FEQTQK 115


>UniRef50_Q1AWF1 Transcriptional regulators, TraR/DksA family n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AWF1_RUBXD
          Length = 130

 Score = 65.5 bits (159), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D    +  +  +  + R  QKI      V  C+  G PIP+ R +  P     VE Q 
Sbjct: 63  EMDATVGLQTRRRLEDVERALQKIEEGTYGV--CDDTGEPIPKGRLEAMPEAIRTVEAQQ 120

Query: 64  YQERQRK 70
             +R R+
Sbjct: 121 RHDRVRR 127


>UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 Tax=Rhodopirellula
           baltica RepID=Q7UEL7_RHOBA
          Length = 121

 Score = 65.5 bits (159), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            + +E   +  I    +++         CE CG  IP  R ++ P    CV CQ   E
Sbjct: 59  MAESESRELADIEEALERLRDGTFG--DCEDCGKSIPMNRLQVVPHARRCVRCQKASE 114


>UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A882_GEMAT
          Length = 127

 Score = 65.2 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 8/78 (10%)

Query: 1   MSDEADEAYSVT--------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D+  +A            E   +  +++  +++         C  CG  I   R    
Sbjct: 49  MADQGTDAMEREKAFLFASKEGRFLWHLDQALRRLYKAPATFGKCHQCGEDIAFERLDAL 108

Query: 53  PGVTLCVECQAYQERQRK 70
           P    C+ C+  +E  +K
Sbjct: 109 PNARYCIACKQREEDAKK 126


>UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter RepID=C5EYJ0_9HELI
          Length = 119

 Score = 65.2 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M +  D          +  I R  +KI        +CE C  PI   R K  P    C+ 
Sbjct: 49  MKNTLDGLIFEHHHKELEYIERALEKIENGEYG--ICEMCDEPISIQRLKAKPHARFCII 106

Query: 61  CQAYQERQRKHY 72
           C+   E+  K  
Sbjct: 107 CREIVEKDLKGR 118


>UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11 Tax=Pseudomonas
           RepID=A5W685_PSEP1
          Length = 154

 Score = 65.2 bits (158), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SD AD A    E+             +  +     +I         C+  G PI   R  
Sbjct: 72  SDPADVASVEEERSWLVNAIDRDQRLLPQLEMALDRIADESFG--WCDDSGEPIGLKRLL 129

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           I P    C+E Q   E+  +H
Sbjct: 130 ISPTTKYCIEAQERHEQLDRH 150


>UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4
           Tax=Hydrogenothermaceae RepID=B2V854_SULSY
          Length = 147

 Score = 65.2 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           ++E     S  E   +  I+   ++I        +CE CG  I E R +  P  TLC++ 
Sbjct: 53  TEEILAQLSDVEIEILKAIDDTLERIQNGTYG--ICEVCGKEIEEERLEAVPWTTLCIQH 110

Query: 62  QAYQE 66
              QE
Sbjct: 111 AKEQE 115


>UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium petroleiphilum PM1
           RepID=A2SLK5_METPP
          Length = 122

 Score = 65.2 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE D       Q  +  ++   Q++N        CE CG PI   R +  P    C++CQ
Sbjct: 55  DELDITLISHWQRELDEVSAALQRLNTGSYG--HCERCGEPIGLPRLRALPEARHCLDCQ 112

Query: 63  AYQER 67
              +R
Sbjct: 113 EQADR 117


>UniRef50_A1VE28 Transcriptional regulator, TraR/DksA family n=12
          Tax=Desulfovibrio RepID=A1VE28_DESVV
          Length = 78

 Score = 65.2 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 5/71 (7%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHG-----IPVYLCEACGNPIPEARRKIFPGV 55
          M+D  D+A     +     I+  R ++ +            C  CG  IPEAR K  PG 
Sbjct: 6  MADIFDQASDYEARDREAAISAARNRLASGPGPEWIDGKPCCRECGEVIPEARVKALPGC 65

Query: 56 TLCVECQAYQE 66
           LC EC    E
Sbjct: 66 GLCRECAEEME 76


>UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n=2
           Tax=Betaproteobacteria RepID=A1K6D2_AZOSB
          Length = 135

 Score = 65.2 bits (158), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
            +   +  I   R++I        +C  CG  IP AR +  P  T CV CQ+  ER  
Sbjct: 68  RDVRELRDIEAARERIAEGEAG--ICVDCGEEIPFARLEAQPTATRCVRCQSLYERTH 123


>UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1
           Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571
           RepID=C6PE95_CLOTS
          Length = 207

 Score = 64.8 bits (157), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + A    EQ  +  I+    ++        +C  C   I   R +  P  +LC  C  
Sbjct: 63  EKNYALKDNEQHVLRQIDDALLRMVKGQYG--ICNHCHKEIELDRLEALPYTSLCANCAK 120


>UniRef50_B5XPP1 Phage/conjugal plasmid C-4 type zinc finger protein, TraR family
          n=14 Tax=Enterobacteriaceae RepID=B5XPP1_KLEP3
          Length = 69

 Score = 64.8 bits (157), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M DE D      EQ     I + R K  +    ++ C  CG PIPE RR+  PG+T C E
Sbjct: 1  MPDEIDRDQEFNEQRLEEMIEQSRFKPGS-APSLFHCRVCGKPIPEKRRQTLPGITTCKE 59

Query: 61 CQAYQERQR 69
          CQ   ER  
Sbjct: 60 CQEKLERHS 68


>UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 Tax=Fibrobacter
           succinogenes subsp. succinogenes S85 RepID=C9RQK2_FIBSS
          Length = 157

 Score = 64.8 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + +  E   +  +    ++I      V  C+ CG  IP+AR    P  T CV C+ 
Sbjct: 67  ETNLSLAAREGKYLVYLEEALKRIKNGTFGV--CKICGQLIPKARLMAVPTATKCVNCKE 124

Query: 64  YQERQR 69
             +++ 
Sbjct: 125 ETKKKE 130


>UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum
           RepID=C6HWS3_9BACT
          Length = 121

 Score = 64.8 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 13/80 (16%)

Query: 2   SDEADEA-----------YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A               E+  +  I+   ++I        +CE CG  I E R  
Sbjct: 38  PDPADLASVEEIQGFSYRLKEREKKLLRKIDEALERIEEGSFG--ICERCGEAIEEKRML 95

Query: 51  IFPGVTLCVECQAYQERQRK 70
             P  T C+ C+   E   +
Sbjct: 96  ARPVTTYCIACKTILEEAER 115


>UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacteria
           RepID=Q2SLB9_HAHCH
          Length = 141

 Score = 64.8 bits (157), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D A               EQ  +  I +  ++I         C   G PI   R  
Sbjct: 60  SDENDRASREEQSAIALRIVDREQKLLPKIQQSLKRIRLGTYG--YCLESGEPIGIPRLL 117

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P    C E +A +E +  HY
Sbjct: 118 ARPTAEYCAEVKALKEIKEHHY 139


>UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus
           oremlandii OhILAs RepID=A8MH72_ALKOO
          Length = 226

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
               E+  +  I+   QKIN        C+ CGN I E R +I P    C++C   +
Sbjct: 67  LENHEKNRLLEIDDAVQKINEGTYGN--CQICGNKILEERLEIMPASITCIDCAEKE 121


>UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3
           Tax=Epsilonproteobacteria RepID=Q30RD2_SULDN
          Length = 116

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A    ++  +  IN    KI        +CE C +PI   R K+ P    C++C+  
Sbjct: 54  IESAIVHQQEQELREINVTLGKIATGDYG--ICEMCEDPIGFQRLKVKPHAIYCIDCREI 111

Query: 65  QERQR 69
            E+ R
Sbjct: 112 VEKSR 116


>UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces limnophilus DSM 3776
           RepID=C1ZKC1_PLALI
          Length = 152

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            +  E   +  INR    I      V  C+ C   IP AR +  P  T+CVECQ  QE
Sbjct: 58  LAALETRELMQINRALALIEEGHYGV--CQKCSKAIPLARLQAVPFTTVCVECQRRQE 113


>UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family n=1 Tax=Treponema
           denticola RepID=Q73KX9_TREDE
          Length = 119

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 3   DEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D AD A   T++             +  I+   ++I         C  C   IPE R K 
Sbjct: 42  DFADLASYSTDRDMLEFIGENNVKKLQKIDSALERIREGKYGK--CITCKEQIPEDRLKA 99

Query: 52  FPGVTLCVECQAYQERQ 68
            P    C+ CQA  E++
Sbjct: 100 LPYALKCIHCQAKSEKK 116


>UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomycetales
           RepID=A4XDN2_SALTO
          Length = 139

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E + + + +    +T + R  ++++  G     CE CGNPIP  R   FP  TLCV C+ 
Sbjct: 77  EQEISLANSILERITQVERALERLDEGGYG--WCERCGNPIPVERLAAFPSATLCVTCKQ 134

Query: 64  YQERQ 68
             ER+
Sbjct: 135 LAERR 139


>UniRef50_B8FC44 Transcriptional regulator, TraR/DksA family n=2
          Tax=Proteobacteria RepID=B8FC44_DESAA
          Length = 69

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D A       T   I   R + +     +  C+ CG+PIPEARRK  PG T C++
Sbjct: 1  MPDPTDRAQEAAADYTRFSIEAARSRGSQST--LADCQDCGDPIPEARRKAVPGCTRCLD 58

Query: 61 CQAYQERQRKH 71
          CQ   E++R  
Sbjct: 59 CQETYEQRRGR 69


>UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1Q506_9BACT
          Length = 140

 Score = 64.4 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 10/74 (13%)

Query: 1   MSDEADEAYSVTEQLTMTG--------INRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   + Y     + +          I+   ++I        +CEAC   I   R K  
Sbjct: 65  MADVGTDNYERELMIELMQSGEDSVRSIDDALERIEEGTFG--ICEACEKKINRERLKAV 122

Query: 53  PGVTLCVECQAYQE 66
           P  +LCV CQ  +E
Sbjct: 123 PYASLCVNCQREEE 136


>UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=A0RK79_BACAH
          Length = 243

 Score = 64.0 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D          +       QKI A      +CE  G  IP  R +  P  T C++   
Sbjct: 61  EKDFGLIELWHKQLEDTKHALQKIEAGTYG--ICEVSGEEIPFERLEAMPTATTCIQHAT 118


>UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR family n=2
           Tax=Alcanivorax RepID=Q0VNX0_ALCBS
          Length = 140

 Score = 64.0 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 13/83 (15%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A               +Q  +  I    +++         C+  G+PI   R  
Sbjct: 55  ADPLDAAVEEETCRHQLRFMARQQALLGKIRGALRRLQNGDYG--YCKISGDPIGLPRLL 112

Query: 51  IFPGVTLCVECQAYQERQRKHYA 73
             P    C E +A  E+  +HYA
Sbjct: 113 ARPTTEYCAEVKARLEQNERHYA 135


>UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbachia
           RepID=C0R4V6_WOLWR
          Length = 130

 Score = 64.0 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D  +E      +     I    +KI         C+  G  I   R K  P    C+E Q
Sbjct: 59  DSGNEELIKRRKDRKEKIKEALEKIKLGTYG--YCDGTGEEIGVERLKANPLAIYCIEEQ 116

Query: 63  AYQERQRKHY 72
              E+++  Y
Sbjct: 117 ERVEKEKNVY 126


>UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula
           staleyi DSM 6068 RepID=D2R5D7_9PLAN
          Length = 150

 Score = 64.0 bits (155), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E        E   +  I+R  +K+ A    +  C++CG PI   R +  P    C+EC  
Sbjct: 53  EIGSQMVEVESRELMQIDRAIEKMRAGRYGL--CDSCGGPIKLIRLQAVPYAIECIECAR 110

Query: 64  YQERQR 69
             ER+ 
Sbjct: 111 RDERRE 116


>UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=10
           Tax=Gammaproteobacteria RepID=Q0A892_ALHEH
          Length = 149

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DE D A    E              +  I++  ++I         CE  G PI   R  
Sbjct: 68  PDEHDRATLEEEYQLELRIRERETRLLRKIDQALRRIETGEYG--YCEVTGEPIGIPRLL 125

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  TL +E +   E + +  
Sbjct: 126 ARPTATLSIEAKERAEVEERTR 147


>UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LMB8_SYNFM
          Length = 122

 Score = 63.6 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 3   DEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE D     TEQ  +             I    Q+I      V  CE CG  I   R K 
Sbjct: 42  DEVDRTSIRTEQEFLLHMHCRNERLVQEILNGLQRIRTGDFGV--CEECGKDIELNRLKA 99

Query: 52  FPGVTLCVECQAYQERQRKHYA 73
            P  T C++C+   ER+ +  A
Sbjct: 100 HPSATQCIKCKKAAERKARFKA 121


>UniRef50_UPI0001AEFD73 hypothetical protein SghaA1_01734 n=1 Tax=Streptomyces ghanaensis
           ATCC 14672 RepID=UPI0001AEFD73
          Length = 111

 Score = 63.2 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +D+         +  +T I+    +++        C+ CG  IP  R +I P    CV C
Sbjct: 49  ADDLLMMQKYAVRQALTDIDAAFTRLDEGTYGT--CQGCGRDIPVERLEILPYARCCVPC 106

Query: 62  QA 63
           Q 
Sbjct: 107 QQ 108


>UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=Bacillus pseudofirmus OF4
           RepID=UPI0001C4239D
          Length = 215

 Score = 63.2 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           E + A     +  +  IN+    I        +CE CG PIP  R +  P     +E  
Sbjct: 62  ELEAALDQHSKDELEEINQALAAIEDGTYG--ICEVCGEPIPFERLEALPTARRRIEHA 118


>UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 Tax=Aquificales
           RepID=C1DXT7_SULAA
          Length = 144

 Score = 63.2 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
             ++ T+  I+   +KI++      +CE CG  I E R +  P V LC++C   +E
Sbjct: 56  QADRETLYLIDLALRKIDSGIYG--ICEECGAVIGEKRLEAIPWVRLCIDCSQNEE 109


>UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26
           Tax=Alphaproteobacteria RepID=Q1GI88_SILST
          Length = 158

 Score = 63.2 bits (153), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD A               ++  +  I+   ++I+        C+  G PI   R  
Sbjct: 76  PDVADRASEETDRALELRTRDRQRKLVAKIDAAIRRIDEGEYG--YCDVTGEPISLKRLD 133

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P  T+ +E Q   ER+ K +
Sbjct: 134 ARPIATMSLEAQERHERREKVH 155


>UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 Tax=Burkholderia
           multivorans RepID=A9AKZ2_BURM1
          Length = 256

 Score = 63.2 bits (153), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A    +   +  I R +Q++         C  C  P+  AR +  P    C  CQA
Sbjct: 185 DVDHALIGMKLAELRAIRRAQQRMVDGSYG--DCIDCDGPVGYARLRARPTAERCTHCQA 242

Query: 64  YQERQ 68
             ER+
Sbjct: 243 LYERR 247


>UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9
           Tax=Campylobacterales RepID=A0RMM0_CAMFF
          Length = 122

 Score = 63.2 bits (153), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           SDE D A               ++  +  I+   +KI        +C+ C + I   R K
Sbjct: 40  SDEFDFASINADAILEHSISAKQRSELNEIDESLKKIANRTYG--ICDMCEDEIDIERLK 97

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           + P    C+ C+   E+  K+
Sbjct: 98  VKPNAKYCITCREIIEKNNKN 118


>UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=B4UII3_ANASK
          Length = 144

 Score = 63.2 bits (153), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               ++  +  I+    +I+A      +C  C   I   R    P   LC EC   +ER 
Sbjct: 76  LGENQRRELVQIDAAIARIDAGEYG--ICRDCEQDIDPRRLAALPYAVLCTECAQRRERA 133

Query: 69  R 69
           +
Sbjct: 134 Q 134


>UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
           sp. JS666 RepID=Q12HC6_POLSJ
          Length = 130

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
             +Q  +  I + ++++         C  CG PIP  R K  P  + C+ CQ   E+ R
Sbjct: 66  QRDQEELRAIQQAQERMADGSYGG--CIDCGQPIPFERLKAQPSASRCIACQTRFEQGR 122


>UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostridium
           RepID=Q182T9_CLOD6
          Length = 163

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +    E+  +  I+    KI        +C+ C N I   R  I P  +LC +C   +
Sbjct: 71  SLINHEEGRLYQIDLALSKIENGTYG--ICDLCHNQIDLERLDILPDTSLCNDCAKKE 126


>UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium
           ochraceum DSM 14365 RepID=D0LUD2_HALO1
          Length = 127

 Score = 62.8 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               E   +  I+   +++ A    +  CE CG  I   R    P  TLC++C++ +E+ 
Sbjct: 60  LHDRETFLLNKIDAALERLKAGT--IDECEECGGEISVQRLIARPVTTLCIDCKSEREQS 117

Query: 69  RKHYA 73
            +   
Sbjct: 118 EEGRT 122


>UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 Tax=Kangiella
           koreensis DSM 16069 RepID=C7R8Q8_KANKD
          Length = 120

 Score = 62.8 bits (152), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M     EA    ++  +  + +  ++I         C  C  PI   R ++ P   LC++
Sbjct: 52  MDQAMSEASVERDKKRLVAVRKALKRIEEGQYG--FCLECDEPISAKRLEVAPETELCLD 109

Query: 61  CQAYQERQRK 70
           CQ+++E   +
Sbjct: 110 CQSFKEEHDR 119


>UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 Tax=Pseudomonas
           RepID=B1J6V4_PSEPW
          Length = 143

 Score = 62.8 bits (152), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               E+  +  I+   ++++        C+  G PI   R  + P  TL +E +  QER+
Sbjct: 79  LLEREKKLLDKIDEALERLSRGEYG--WCKETGEPIGLRRLLLRPTATLSIEAKERQERR 136

Query: 69  RKH 71
            +H
Sbjct: 137 ERH 139


>UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10
           Tax=Actinomycetales RepID=A6WCW5_KINRD
          Length = 159

 Score = 62.8 bits (152), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +       +  +    R   ++ +    V  CE+C  P+ +AR + FP VTLCV C++
Sbjct: 97  EHEMTIVNNARELLEQTQRALVRLGSGVYGV--CESCDGPVGKARLQAFPRVTLCVRCKS 154

Query: 64  YQERQ 68
             ER+
Sbjct: 155 RGERR 159


>UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppressor protein homolog
           n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7S0_PSEFS
          Length = 138

 Score = 62.8 bits (152), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
           E+     I     +I         C+  G PI   R    P  +   E Q   ER  KH
Sbjct: 76  ERAEAMAIKAALVRIEEDAYG--WCDDSGEPIGLKRLLNNPTASRTTEAQTRFERLGKH 132


>UniRef50_A4SL94 Phage protein n=2 Tax=root RepID=A4SL94_AERS4
          Length = 69

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/68 (38%), Positives = 37/68 (54%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D+ D A     ++  T + R   K +  G+ ++ CE C +PIPEARR   PGV LCV CQ
Sbjct: 2  DDIDRANQHAARMLTTNLARQVGKGHYQGMSLHHCEECDDPIPEARRHHVPGVRLCVPCQ 61

Query: 63 AYQERQRK 70
             E+  +
Sbjct: 62 TRIEQLAR 69


>UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter
           thermophilus DSM 20745 RepID=D1C120_SPHTD
          Length = 130

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   +           I R   K++        CE C  PIP  R +  P    C++CQA
Sbjct: 62  ERLLSVRDRLADRKVLIERAITKMDQGEYG--YCENCKRPIPPDRLEALPFARYCIDCQA 119

Query: 64  YQERQR 69
             +R++
Sbjct: 120 DMDRRQ 125


>UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           salexigens DSM 2638 RepID=C6C0K2_DESAD
          Length = 116

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A  V E   +  +     +++       +CE CG  I  AR K  P    CV CQ+ 
Sbjct: 49  INLALHVRETKLIIDMEETLSRVDNWDFG--ICEDCGEEIALARIKANPTTRFCVSCQSR 106

Query: 65  QER 67
            E 
Sbjct: 107 MEE 109


>UniRef50_C5B4E4 Putative uncharacterized protein n=1 Tax=Methylobacterium
          extorquens AM1 RepID=C5B4E4_METEA
          Length = 73

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 29/73 (39%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D    + E      +  IR +     +    C+ CG  IP  RR+  P    CV 
Sbjct: 1  MADDVDMIQHLDEMAMDGKLAAIRSRTETTDLAPEDCDDCGGDIPMERRRAAPWTRRCVR 60

Query: 61 CQAYQERQRKHYA 73
          CQ   ER     A
Sbjct: 61 CQTLAERAFGGRA 73


>UniRef50_A8GA41 Transcriptional regulator, TraR/DksA family n=1 Tax=Serratia
          proteamaculans 568 RepID=A8GA41_SERP5
          Length = 73

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A      +    I     +          C  C   IPE RR+  PGV+ CV 
Sbjct: 1  MADTIDMAQERQALMLEKQIAHA--RPVVTQASAQFCADCDGEIPEVRRRAIPGVSRCVA 58

Query: 61 CQAYQERQRKHY 72
          CQ   E Q++H+
Sbjct: 59 CQEVSEAQQRHF 70


>UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13 Tax=Clostridium
           RepID=C6Q1P6_9CLOT
          Length = 201

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   A+   E   +  I      I+        C  CG  I E R +  P    CVECQ 
Sbjct: 61  ERGIAFKGNELSIIKKIENSLSNIDKGTYGK--CSICGKDIKEERLEFIPYTDHCVECQK 118


>UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Cupriavidus
           metallidurans CH34 RepID=Q1LEV8_RALME
          Length = 123

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     ++ +  I   R ++        +C  C  PIP  R + +P    C  CQ   E+
Sbjct: 60  AMREHYRVELEDIAAARGRMTLGSY--AICRECEEPIPFERLQAYPTAKRCTACQREHEQ 117

Query: 68  QR 69
           +R
Sbjct: 118 KR 119


>UniRef50_B8F4E6 DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR
          family n=8 Tax=root RepID=B8F4E6_HAEPS
          Length = 72

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D+ D A  + E+     + ++R K  A    +  CE C  PIPEARR+   G T C++
Sbjct: 1  MKDQIDRANELAEKEREFALAKLRNKPTA--CSLIHCEDCDEPIPEARRQNVQGCTRCID 58

Query: 61 CQAYQERQRKHY 72
          CQ   E ++K Y
Sbjct: 59 CQQIYEYKQKGY 70


>UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM
           5159 RepID=B9KZU6_THERP
          Length = 133

 Score = 62.5 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D+    T +  +  +    ++I+       +C  C  PI   R +  P    CV  Q 
Sbjct: 63  EYDQTMLRTLEEELHEVLAALERIDQGTYG--ICVDCKRPIERERLEAVPWAVRCVADQE 120

Query: 64  YQERQ 68
             ER+
Sbjct: 121 RFERE 125


>UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani
           RepID=Q3JAV6_NITOC
          Length = 132

 Score = 62.1 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A        +  I +   +         +C  C   I   R +I P V  C +CQ 
Sbjct: 61  DIDLAIVDLHIEEIRNIEQALMRFPKGNYG--ICIDCNTDIDYQRLQINPTVKRCFDCQT 118

Query: 64  YQERQRKHYA 73
             ER  +  A
Sbjct: 119 RHERTHREKA 128


>UniRef50_Q4QK09 DnaK suppressor protein, bacteriophage PSP3 gp34 homolog n=7
          Tax=Haemophilus influenzae RepID=Q4QK09_HAEI8
          Length = 71

 Score = 62.1 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A  + E      + + R       +    CE C  PIPE RR++  GVT CV 
Sbjct: 1  MTDQFDRAQQLEEMQREIALKKHR---TFKAVSRLYCEDCDAPIPEKRRQMIQGVTRCVT 57

Query: 61 CQAYQERQRKHY 72
          CQ   E Q++++
Sbjct: 58 CQQRFEIQQRNF 69


>UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4 Tax=Geobacter
           RepID=Q39WX5_GEOMG
          Length = 130

 Score = 62.1 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A +   +  +T ++    ++         C+ CG  I E R ++ P    C+ CQ  +E
Sbjct: 63  MAVADIRRQELTRMDEALGRLKEGRYG--FCDECGAEIDEGRLRVAPYAPCCISCQTRRE 120


>UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGP9_BDEBA
          Length = 126

 Score = 62.1 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               ++  +  I R   KI         CE+C   I   R ++ P   LC++C   QE Q
Sbjct: 64  LHERDRTALYAIERALGKIADGTYG--QCESCSEIINARRLQVRPFTALCIDCMEEQESQ 121


>UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WGI4_BACSK
          Length = 174

 Score = 62.1 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           ++ +  +Q  +  I    ++I        +C   G PIP  R +  P      E Q  +E
Sbjct: 62  QSLNEADQKRLQDITEALERIEEGTYG--ICIDTGQPIPYERLEALPYAKRTPEAQREKE 119


>UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter
           thermophilus DSM 20745 RepID=D1C5L2_SPHTD
          Length = 132

 Score = 62.1 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            +  ++    ++      V  C  CG  I  AR K  P  T C+ CQ + E +
Sbjct: 79  ELAEVDAALDRLERGTYGV--CIDCGEMIDPARLKALPTATRCLRCQTHFEYR 129


>UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 Tax=Exiguobacterium
           RepID=C4KZG3_EXISA
          Length = 183

 Score = 62.1 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D+A +  ++  ++ +++    I         CE CG  I   R ++ P  TLC+E   
Sbjct: 57  ERDQALNELDEEFLSDVDKALLAIQNGTYGK--CEVCGKDIELDRLEVIPEATLCIEHAR 114


>UniRef50_B4F0L8 Phage protein n=4 Tax=Enterobacteriaceae RepID=B4F0L8_PROMH
          Length = 73

 Score = 62.1 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MS E D A   ++ L    I  +  +    G+  + CE CG  IPE RR    G T C +
Sbjct: 1  MSKEMDLACEQSQLLLDKQIKAVTGR--YIGVSAFECEDCGREIPEKRRIAVMGCTRCAD 58

Query: 61 CQAYQERQRKHY 72
          CQ   E + KHY
Sbjct: 59 CQTVYELKSKHY 70


>UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RLG0_CLOCL
          Length = 199

 Score = 62.1 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 6/64 (9%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ----A 63
           A    E   +  IN     +      +  C  C   I + R    P    C +CQ     
Sbjct: 66  ALKANETNMLGKINEALDALENGDYGL--CGNCQKEITKERLDFLPYAKYCAKCQGIMHT 123

Query: 64  YQER 67
            +ER
Sbjct: 124 LRER 127


>UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=3
           Tax=Propionibacterium acnes RepID=D1YA14_PROAC
          Length = 159

 Score = 62.1 bits (150), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 13/77 (16%)

Query: 3   DEADEAYSVTEQLTMTGINR-----------IRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D   S  E+     + R             Q ++        CE+CG PI +AR + 
Sbjct: 85  DTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDRGTWGT--CESCGEPIGKARLQA 142

Query: 52  FPGVTLCVECQAYQERQ 68
           FP  T+CV+C+  QER+
Sbjct: 143 FPRATMCVKCKQRQERR 159


>UniRef50_Q4FUG7 Possible phage TraR/DksA family protein n=1 Tax=Psychrobacter
          arcticus 273-4 RepID=Q4FUG7_PSYA2
          Length = 66

 Score = 61.7 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+AD A    +      ++R           +  C  CG  IP  R +   GVTLCV+
Sbjct: 1  MADDADRANDYVDLTMAHCLSRA---PKFDKPSLTECMECGEDIPAKR-QAMGGVTLCVD 56

Query: 61 CQAYQERQRK 70
          CQ+  E++ K
Sbjct: 57 CQSVFEKRGK 66


>UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X580_DESRD
          Length = 115

 Score = 61.7 bits (149), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 1   MSDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARR 49
           ++D AD+A   T++             +  + +   ++      +  CE CG  I   R 
Sbjct: 38  LADPADQATLSTDRQLALLRQQRLLHQLHEVEQALHQLANGEYGL--CEECGEEIGVPRL 95

Query: 50  KIFPGVTLCVECQAYQERQR 69
              P   LC+ECQ   ER  
Sbjct: 96  VACPSARLCIECQEQLERAA 115


>UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 Tax=Elusimicrobium
           minutum Pei191 RepID=B2KE71_ELUMP
          Length = 258

 Score = 61.7 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 13/75 (17%)

Query: 3   DEADEAYSVTEQLTM-----------TGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D A    ++  +             I    +KI+        CE C   +P+ R K 
Sbjct: 184 DPIDTATQSLDKEILFEQTDNSHTQIDQIESALRKIDKGIYGK--CENCRQLLPKKRIKA 241

Query: 52  FPGVTLCVECQAYQE 66
            P    CV CQ+ +E
Sbjct: 242 LPFARYCVVCQSSKE 256


>UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus
           metalliredigens QYMF RepID=A6TRY0_ALKMQ
          Length = 224

 Score = 61.7 bits (149), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
               E+  +T I+R  +KI         C+ CG  IP+ R ++ P   +C+ C 
Sbjct: 67  LENHERYRVTEIDRALEKIQEGTYG--ECQLCGQGIPDERLEVMPEANICMVCA 118


>UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 Tax=Micromonospora
           aurantiaca ATCC 27029 RepID=D1SGF0_9ACTO
          Length = 103

 Score = 61.3 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
              T +  +    +  ++++     V  CE CG  IP AR +I P    CV CQ  +
Sbjct: 49  LIETARQGVADTAQALKRMSEGTYGV--CERCGQDIPTARLEILPSARFCVPCQQRR 103


>UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis
           HTCC2594 RepID=Q2NBT1_ERYLH
          Length = 104

 Score = 61.3 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DEA E      +  +  +     +I         C  CG PIP+ R +  P  T C++C 
Sbjct: 47  DEALEGVDDVLRAEIQQVRYALARIENGSYGT--CAKCGEPIPKERLEARPIATRCIKCA 104


>UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID=Q1D808_MYXXD
          Length = 130

 Score = 61.3 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           ++D    +   +++  +  I+   ++++        C  CG  IP  R +  P    C E
Sbjct: 54  LADYTLSSLMESQRREIMLIDAALRRMDMGVFG--ECVDCGFEIPIERLEALPFAIRCEE 111

Query: 61  CQAYQERQRK 70
             +  E + +
Sbjct: 112 DASIHELETR 121


>UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 Tax=Chloroherpeton
           thalassium ATCC 35110 RepID=B3QWB1_CHLT3
          Length = 208

 Score = 61.3 bits (148), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 10/72 (13%)

Query: 1   MSDEADEAYSVTEQLT--------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   E     ++          ++ I++  ++I        +C   G PIP+AR +  
Sbjct: 138 MADHGTETMDREQRFLFISRDEKYLSYIDKALERIKNKTYG--ICAISGKPIPKARLEAV 195

Query: 53  PGVTLCVECQAY 64
           P   + +E +  
Sbjct: 196 PHTGVRIEYKKR 207


>UniRef50_B9Z318 Transcriptional regulator, TraR/DksA family n=2
          Tax=Chromobacterium group RepID=B9Z318_9NEIS
          Length = 68

 Score = 61.3 bits (148), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A  +  +     I   R  +    +    CE CG PIP AR+   PG T CV+CQ
Sbjct: 2  DPFDRAQELEMEQREAAIAAARDLVGRG-VSATECEDCGTPIPPARQLAAPGCTRCVDCQ 60

Query: 63 AYQERQRK 70
            +ER R+
Sbjct: 61 NRRERPRR 68


>UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231
           RepID=A4BMT6_9GAMM
          Length = 132

 Score = 61.3 bits (148), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + + A        +  I    +K+         C  CG  I   R +  P V  C  CQ 
Sbjct: 61  DLNIAEIDRHVREIQRIEAALRKLADGSYG--YCMDCGEAIAAQRLQANPAVARCYACQT 118

Query: 64  YQERQR 69
             E++ 
Sbjct: 119 RFEQEE 124


>UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbinolicus DSM 2380
           RepID=Q3A5P4_PELCD
          Length = 127

 Score = 61.3 bits (148), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHYA 73
           +  +  I+   +++         CEACG  I  AR +I P    C+ C+   E++ K  A
Sbjct: 63  REEILEIDEALERLRDGSYGR--CEACGKTIDIARLEILPFTRRCLTCRQEAEKEAKTKA 120


>UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Herminiimonas
           arsenicoxydans RepID=A4G7K6_HERAR
          Length = 106

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
             + D+A    E + +  I    ++I+ H   +  C  CG  I  AR +  P    C +C
Sbjct: 40  PTDVDDAMIKMELVELADIEAAHRRIDNHQYGL--CIDCGCTIDYARLQASPTAKRCTQC 97

Query: 62  QAYQERQRK 70
           Q   E++  
Sbjct: 98  QRLHEQRHH 106


>UniRef50_Q2W8C2 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W8C2_MAGSA
          Length = 128

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+ D A    E      +  +  ++        +C+ C +PI   R  + P    C  C 
Sbjct: 52  DDIDCAAERIEAFRDVALKAVLNRMT-GPRSSGICKTCYDPIEPQRIAVNPHARHCSFCA 110

Query: 63  AYQERQRKH 71
           A +E+ ++ 
Sbjct: 111 AEEEQAQRQ 119


>UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacteria RepID=DKSA_CAUCN
          Length = 142

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 4   EADEAYSVT----EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           E D A  +     ++  ++ I++  +++         CE  G PI  AR +  P  T+ V
Sbjct: 69  ETDRALELRTRDRQRKLISKIDQALRRVEDGSYG--YCEETGEPIGLARLEARPTATMSV 126

Query: 60  ECQ 62
           E Q
Sbjct: 127 EAQ 129


>UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA family protein n=1
           Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CE0
          Length = 253

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 20/64 (31%), Gaps = 2/64 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           S E D      E            +I+        C +CG  + E R    P V  CV C
Sbjct: 59  SQELDTTLLENETYLRDEAVAALGRIDDGTFGR--CTSCGGDVGEERLDALPYVRQCVAC 116

Query: 62  QAYQ 65
              +
Sbjct: 117 AQAE 120


>UniRef50_Q88IG2 C4-type zinc finger protein, DksA/TraR family n=1 Tax=Pseudomonas
          putida KT2440 RepID=Q88IG2_PSEPK
          Length = 72

 Score = 60.9 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A    +      ++            +  C  CG  IPE RR    G   C+E
Sbjct: 1  MADIADLANDRAQWHLDLVLSARL--PAPECESLEDCVGCGGSIPEPRRLAVQGCQRCIE 58

Query: 61 CQAYQERQRKHYA 73
          CQ + E++   YA
Sbjct: 59 CQGFFEKKGARYA 71


>UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1JWV8_DESAC
          Length = 139

 Score = 60.5 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               +   +  IN    +I         C   G  I   R   +P   L VE Q  +E +
Sbjct: 73  SHDRKSRLLAQINAALLRIKEGSYG--YCVETGEEIGLRRLLAYPAAFLLVEVQEAREHR 130

Query: 69  RKHYA 73
            + +A
Sbjct: 131 SRSFA 135


>UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1 Tax=Acidothermus
           cellulolyticus 11B RepID=A0LSA0_ACIC1
          Length = 113

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     Q     +    Q+I      +  C +CG P+PE R +  P    C+ CQA  E 
Sbjct: 54  ALLEVAQEQRRQVLEALQRIENGTYGL--CVSCGAPLPEGRLEAKPEAARCLSCQAKLEA 111

Query: 68  QR 69
            R
Sbjct: 112 GR 113


>UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LTL7_DESBD
          Length = 133

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D AD+A S + +             +  I    + I+       +CE CG  I + R  
Sbjct: 41  PDLADQACSASSRDWNVIRYNRNVKLLKDITVALKAIDNDSYG--ICEMCGEHIADRRLL 98

Query: 51  IFPGVTLCVECQAYQER 67
             P    C+ECQ   +R
Sbjct: 99  AIPSALFCIECQEMIDR 115


>UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 Tax=Thiomonas
           intermedia K12 RepID=C7HYG4_THIIN
          Length = 128

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D  + A +  +   +  I+   Q+++       +C  CG  I  AR      V  C  CQ
Sbjct: 56  DAVEIASTARDATELAAIDNALQRLDTPDFG--ICIDCGADIEPARLLAESTVLRCTACQ 113

Query: 63  AYQERQRK 70
              E Q  
Sbjct: 114 QRFEHQHH 121


>UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium
           Ellin514 RepID=B9XD69_9BACT
          Length = 184

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 1   MSD------EADEA--YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D      + D A      +Q  +  I +  Q+I ++     +CE  G PI   R    
Sbjct: 77  MADAGTDTYDRDFALSMLSADQSAVYEIEQAIQRIESNTYG--ICEMTGKPIQSERLNAI 134

Query: 53  PGVTLCVECQAYQERQR 69
           P     VE +   ER  
Sbjct: 135 PWTRFSVEAERELERNG 151


>UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromonosporaceae
           RepID=A4X6U9_SALTO
          Length = 132

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 4   EADEAYS--VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           E D A S   T             ++         CE CG  IP  R +IFP  T CV C
Sbjct: 66  ERDTAQSLLRTILDRRAQFEHALTRLEEGTYG--FCEGCGASIPVERLEIFPSATTCVTC 123

Query: 62  QAYQERQR 69
           +  +ER+ 
Sbjct: 124 KQTRERRA 131


>UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=38 Tax=Burkholderia
           RepID=A0AZX7_BURCH
          Length = 130

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D A    +   +  I R +Q++         C  C   +   R    P    C  CQ+
Sbjct: 59  DVDHALIGMKLTELRAIGRAQQRMRDGSYG--ECIDCDGSVGYERLLARPTAERCTHCQS 116

Query: 64  YQERQ 68
             ER+
Sbjct: 117 LYERR 121


>UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromonas macleodii ATCC 27126
           RepID=UPI0001AEC064
          Length = 140

 Score = 60.5 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 13/81 (16%)

Query: 3   DEADEAYSVTE-----------QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE D A    E           +  +  I++  ++I         C   G PI   R  I
Sbjct: 57  DEVDRAQYEEESRLSLRILDRERKLLPKIDKSLRRIKDKSFG--YCLETGEPIGIPRLLI 114

Query: 52  FPGVTLCVECQAYQERQRKHY 72
            P    C + +   E + +HY
Sbjct: 115 RPVSEYCADVKMVNEGREQHY 135


>UniRef50_A9QS46 Putative conjugal transfer protein TraR n=1 Tax=Pseudomonas
          syringae RepID=A9QS46_PSESX
          Length = 68

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A    + L    + + R +I    +    CE C NPIPE RR    G   C+ 
Sbjct: 1  MADDIDRATEQAQYLLDVALFKHR-RIPTSLVSSQFCEDCDNPIPEPRRAAIVGCETCIH 59

Query: 61 CQAYQERQR 69
          CQ+ +E++R
Sbjct: 60 CQSLREQRR 68


>UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudovibrio
           sp. JE062 RepID=B6R7R7_9RHOB
          Length = 118

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +A        +  I+   Q+I         C  CG  IPEAR ++ P    CV C    
Sbjct: 61  QANDRQRARELQRIDGALQRIKEEEYG--FCLECGEDIPEARLRVDPAALYCVSCAKLF 117


>UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Planctomyces maris DSM
           8797 RepID=A6C001_9PLAN
          Length = 141

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            +  E   +  I R    I         CE+C   IP AR K  P    CV C   +E
Sbjct: 49  LAEIEYKELMQIRRAISLIQEGRYG--HCESCNKNIPIARLKAVPYAMFCVSCAEQRE 104


>UniRef50_A6UZ55 Conserved domain protein n=2 Tax=Pseudomonas RepID=A6UZ55_PSEA7
          Length = 69

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A +   Q     +   + ++   G  +  C+ CG  IPEARR    G+  C  
Sbjct: 1  MADCFDRAQARELQDRELALQAHQVRVRPSGPSLTHCQECGEQIPEARR-ALGGIIRCTP 59

Query: 61 CQAYQERQRK 70
          CQA  E+  +
Sbjct: 60 CQARFEKGGR 69


>UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2
           Tax=Nitrosomonadaceae RepID=Q2YD37_NITMU
          Length = 131

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               +   M  +    +++         C  CG  I   R  ++P    CV CQ   E+ 
Sbjct: 65  LVDRQVNEMREVEAALKRLADLDYG--DCIDCGGEIGFDRLMVYPTAQRCVRCQEVHEKT 122

Query: 69  RKH 71
             H
Sbjct: 123 YMH 125


>UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD
          Length = 220

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 17/57 (29%), Gaps = 2/57 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           E D A           I +   ++        +CE  G  IP  R +  P     V 
Sbjct: 62  EKDIALYEQMSREYEEIKQALDRMENGTYG--ICERTGEQIPYERLEANPTARTTVA 116


>UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 Tax=Proteobacteria
           RepID=A0LCU1_MAGSM
          Length = 155

 Score = 60.1 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +D  D A               E+  +  I+R  + I         C  CG  I   R +
Sbjct: 67  ADPTDRASLETDRNFELRTRDRERKLIGKIDRTIRTIEEDEYG--FCSGCGVEIGLGRLQ 124

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC++C+  +E+  + +
Sbjct: 125 ARPVTDLCIDCKTKEEQMERVH 146


>UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangium cellulosum 'So
           ce 56' RepID=A9G9K0_SORC5
          Length = 167

 Score = 59.8 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 13/79 (16%)

Query: 3   DEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DE DEA +             +   +  I+R   K+      +  CE  G PI   R K+
Sbjct: 86  DEMDEANAEGATSLTSKLLERDVRVLAEIDRALAKMKEGSYGM--CEGTGEPIGYRRLKL 143

Query: 52  FPGVTLCVECQAYQERQRK 70
            P     V  Q   ER+ +
Sbjct: 144 RPWARYSVAYQEQIEREER 162


>UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1
           Tax=Geodermatophilus obscurus DSM 43160
           RepID=D2S7M9_9ACTO
          Length = 106

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M D      + +   T+  I    ++I A       C  CG+ +P  R +  P    CV 
Sbjct: 44  MPDLVTVNRAASLLRTIEEIEAALERIAAGTYGT--CVRCGSAVPAERLEFRPFAAACVS 101

Query: 61  CQAYQ 65
           CQ  +
Sbjct: 102 CQETR 106


>UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobium
           RepID=Q1MI46_RHIL3
          Length = 107

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 2/63 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE            +  I+    ++N        C  C N I + R    P    C++C 
Sbjct: 46  DEVLREMQAEGHNQIAAIDAAIGRLNDDTYGK--CVKCHNRIGKERLTAVPYTPFCIDCA 103

Query: 63  AYQ 65
              
Sbjct: 104 KSF 106


>UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WFI4_BACSK
          Length = 207

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E D+A     +  +  +    +K N       +CE  G  IP  R + +P     VE   
Sbjct: 53  EKDQAVHNHIKDELHEVEHALEKFNDGSYG--ICEKTGKAIPYERLEAYPAARTVVEESR 110

Query: 64  YQER 67
             E 
Sbjct: 111 PFEE 114


>UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 Tax=Herpetosiphon
           aurantiacus ATCC 23779 RepID=A9B2U1_HERA2
          Length = 117

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           E + A     Q  +  +     +I+       +C   G  IP  R ++ P   L +E  
Sbjct: 59  EKNFALIEDRQRLIGEVEAALDRIDHGTYG--ICLKTGKQIPIERLEVLPYAALSIEAA 115


>UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax=Cupriavidus
           RepID=Q473A0_RALEJ
          Length = 124

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     +  +  I   R+++ A       C  CG  IP +R + +P    C +CQ   ER
Sbjct: 60  AMLEHYRTELADIRAARERMKAGQYGT--CTDCGEAIPYSRLQAYPTARRCADCQRGHER 117


>UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           aespoeensis Aspo-2 RepID=D1UB56_9DELT
          Length = 116

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            + A        +       +++         C+ CG+PI  AR K  P   LC+ CQ+ 
Sbjct: 49  VNLAMQRRRMARIKEYECAIKRLRETDYGT--CDECGDPIGLARLKANPSARLCIVCQSA 106

Query: 65  QERQRKHY 72
            E +    
Sbjct: 107 AEEEDHAR 114


>UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium tetani
           RepID=Q894D3_CLOTE
          Length = 210

 Score = 59.8 bits (144), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   A+   E   +  I    + I         C+ CG  I E R +  P    C+ECQ 
Sbjct: 61  ERGLAFKGNEINILNKIESSLESIEKGQYGN--CKNCGKRINEDRLEFIPYAENCIECQK 118

Query: 64  YQ 65
             
Sbjct: 119 EL 120


>UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 Tax=Moraxellaceae
           RepID=A5WFD1_PSYWF
          Length = 109

 Score = 59.4 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
             V  Q ++T +N    +I+        C  CG  I + R +  P  TLC++  +
Sbjct: 57  LLVEAQQSLTYVNNALSRIDNGTYG--ECTVCGEDIEDKRLEAVPYATLCMQHAS 109


>UniRef50_C6BZJ9 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           salexigens DSM 2638 RepID=C6BZJ9_DESAD
          Length = 115

 Score = 59.4 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            +++     +  +  +     ++         CE CG  IP AR    P    CV C  +
Sbjct: 54  INKSSIAQSRQRILNLEDALNRLEKDSF-FGECEECGEDIPLARLLTLPESRYCVYCAEH 112

Query: 65  QER 67
            E 
Sbjct: 113 LEE 115


>UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q021L0_SOLUE
          Length = 129

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
               +   M G+    ++I        +C+ C   I   R ++ P  + C+ CQ   + 
Sbjct: 54  QLELDHKRMRGLRDALERIEDGSYG--ICQRCDEDISLKRLRVVPWASYCLRCQESADH 110


>UniRef50_C4GGH6 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC
          51147 RepID=C4GGH6_9NEIS
          Length = 75

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 35/73 (47%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MS + D+A  + E+     ++   ++          C+ CG+ IPEARR+   G   C+E
Sbjct: 1  MSRQIDQACELEERYRQAALDYQAKQNYPQRPSASHCQDCGDIIPEARRRAALGCQYCIE 60

Query: 61 CQAYQERQRKHYA 73
          CQ   E  +  YA
Sbjct: 61 CQERIEHAKAQYA 73


>UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobium etli CFN 42
           RepID=Q2K1F6_RHIEC
          Length = 106

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+         +  +  I+   +++N        C  C +PI   R +  P    CV C 
Sbjct: 45  DQVLMEMRKEAREQIISIDAALERLNHGSFGR--CVRCLDPIDPGRLEAIPYTPYCVTCA 102

Query: 63  A 63
            
Sbjct: 103 R 103


>UniRef50_A7N392 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC
          BAA-1116 RepID=A7N392_VIBHB
          Length = 72

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINR--IRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          M D  D A  +  QLT   +     R K  A       C  CG+PIPEARR+   G   C
Sbjct: 1  MPDVIDHACDIEAQLTEVALANQLARAKPKASRESAQECGECGDPIPEARRQHMTGCQYC 60

Query: 59 VECQAYQERQRK 70
            CQ+  E+ ++
Sbjct: 61 THCQSDLEKMKR 72


>UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 Tax=Citreicella sp.
           SE45 RepID=D0D572_9RHOB
          Length = 130

 Score = 59.4 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E+   + Q  +  I    ++++        C  CG  I EAR  I P   LC  C 
Sbjct: 68  DEVLESLGTSGQAEIGRIEAALRRMDEGEYG--YCLTCGEAISEARLDILPDAPLCAACA 125


>UniRef50_Q9ZBS4 Putative uncharacterized protein SCO6164 n=4 Tax=Streptomyces
           RepID=Q9ZBS4_STRCO
          Length = 108

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+   A     +  +  I+    ++         C  CG P+P  R +I P    CV CQ
Sbjct: 46  DQLMSAQKAAIERVLKEIDEAFARVEEGTYGA--CLGCGKPVPGERLEILPYTRYCVACQ 103

Query: 63  AYQ 65
              
Sbjct: 104 RRA 106


>UniRef50_UPI0001826470 hypothetical protein EcanA3_08019 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001826470
          Length = 71

 Score = 59.0 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A  + E      ++    +IN + +    CE CG  IPE RR   PG   C ECQ
Sbjct: 2  DIIDTAAEIEELQRNAALSAH--RINRNAVSAERCEECGEDIPEPRRAAVPGCQTCSECQ 59

Query: 63 AYQERQRKHY 72
          +  E + K  
Sbjct: 60 SVIELKNKQR 69


>UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea
           34H RepID=Q48AS1_COLP3
          Length = 104

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D   +      +L ++ +    ++I         C  C  PI   R    P  T C++C 
Sbjct: 46  DGVLDEIHHEAKLELSLVKSALKRITEGLYGS--CVECEEPINPDRLSALPYTTKCIKCA 103


>UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q02C95_SOLUE
          Length = 128

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +   +  +     ++ +      +C AC   I E R +  P    CV+CQ   
Sbjct: 64  DYRQLRMVEEALDRLESGDFG--ICLACDESIAEKRLQALPWARYCVKCQDEM 114


>UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01U65_SOLUE
          Length = 129

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               E   +  +     ++      V  C  C   I   R    P    C++CQ   +R 
Sbjct: 54  NLDRESNLLRNVKGALVRVADGSYGV--CMHCEEDIKPKRLDAVPWTKYCIKCQEAADRH 111

Query: 69  R 69
            
Sbjct: 112 E 112


>UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BN62_9GAMM
          Length = 122

 Score = 59.0 bits (142), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A     Q  +  I+   QKI+A       C+ACG  I  AR    P   LC+ CQ  QE+
Sbjct: 62  ANLAQCQERIRQIDEALQKIDAEDYG--YCDACGERIALARLNARPESPLCISCQEKQEQ 119


>UniRef50_A4JDG9 Transcriptional regulator, TraR/DksA family n=4
          Tax=Proteobacteria RepID=A4JDG9_BURVG
          Length = 77

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLC--EACGNPIPEARRKIFPGVTLCVE 60
          D+ D A  + EQ     I    + +++       C  EACG PIPE RR+   G   CVE
Sbjct: 2  DDFDHASDIEEQYRALAIAAATRPVHSAAESESFCQNEACGEPIPEERRRAVSGCRFCVE 61

Query: 61 CQAYQER-QRKHYA 73
          CQ  +E+   + YA
Sbjct: 62 CQERREQVLNRRYA 75


>UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 Tax=Ralstonia
           RepID=B2UIX3_RALPJ
          Length = 120

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +  +  +N  R+++  H     +C  CG  IP  R +  P    C+ CQ   ER+
Sbjct: 66  RSELEQLNAARERMQQHSYG--ICVDCGEAIPFLRLQAQPTAMRCLPCQTACERR 118


>UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas
           sp. JS666 RepID=Q12E87_POLSJ
          Length = 134

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHG----IPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A        +  +    ++++            C  CG  I   R    P    C  CQA
Sbjct: 63  AKVDHAAHELEQVLAALRRLDDATNGKSPGYGHCLDCGEAIDLRRLAALPATPYCTACQA 122

Query: 64  YQERQRK 70
             E +R+
Sbjct: 123 IHEHERQ 129


>UniRef50_B5EUP2 Zinc finger protein n=32 Tax=Proteobacteria RepID=B5EUP2_VIBFM
          Length = 89

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 34/65 (52%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              +   +  INR R  ++        C  CG  IPEARR I PGV LCVECQA ++ +
Sbjct: 12 QEQIDATVIDAINRARSHLHHEHNDTNYCLECGELIPEARRNIIPGVELCVECQAKEDAR 71

Query: 69 RKHYA 73
           K ++
Sbjct: 72 EKAFS 76


>UniRef50_A1F607 Conserved domain protein n=3 Tax=Vibrio cholerae
          RepID=A1F607_VIBCH
          Length = 76

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRI--------RQKINAHGIPVYLCEACGNPIPEARRKIF 52
          MSD  D+A    ++     +N          +++ +        C +CG+ IP+ R +  
Sbjct: 1  MSDLFDKAQERDQEFLALALNNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQ 60

Query: 53 PGVTLCVECQAYQE 66
          P    CV CQ+ +E
Sbjct: 61 PEAVRCVSCQSRKE 74


>UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepID=A3IED4_9BACI
          Length = 150

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 18/61 (29%), Gaps = 2/61 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           + A           I    Q +         C  CG  IP  R +  P    CVE    +
Sbjct: 55  EMAIDEHRGDNAEEIKEALQAMADGTYG--ECTVCGKEIPIGRLEAMPQALTCVEHAEKK 112

Query: 66  E 66
           E
Sbjct: 113 E 113


>UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family protein n=3
           Tax=Proteobacteria RepID=Q0AHN9_NITEC
          Length = 135

 Score = 58.6 bits (141), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           +  EA  + +   +  I     +I      +  C  CG P+   R   +P    C  CQ 
Sbjct: 64  DITEAEVIRDIGEVRDIVAAEDRIATGKYGL--CIDCGEPVRYKRLDAYPTAKRCFTCQV 121

Query: 64  YQER 67
            +ER
Sbjct: 122 RRER 125


>UniRef50_B3B1J8 Conserved domain protein n=5 Tax=Gammaproteobacteria
          RepID=B3B1J8_ECO57
          Length = 75

 Score = 58.6 bits (141), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINA--HGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D++D A +V E+ +   +     +           +C  CG  IP AR    P    CV 
Sbjct: 2  DDSDRAQAVMERGSERALCNRLTRKRQAVDTPGRRVCADCGGEIPAARLVAVPDAIRCVN 61

Query: 61 CQAYQERQR 69
          CQ   E + 
Sbjct: 62 CQNIMEARH 70


>UniRef50_Q2LQQ9 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus
          SB RepID=Q2LQQ9_SYNAS
          Length = 86

 Score = 58.2 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 15/84 (17%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINA---------------HGIPVYLCEACGNPIPEA 47
          DE D A           +    ++ +                      +C  CG  I  A
Sbjct: 2  DEIDHAQQHEAMHREIALREHFRRRDNYSERGRNPGLHPKGAGPGERRICRDCGEEIQPA 61

Query: 48 RRKIFPGVTLCVECQAYQERQRKH 71
          R    P    C+ECQ  +ER+ +H
Sbjct: 62 RLAAMPFAVRCIECQGIKERRERH 85


>UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bacteroidetes
           RepID=Q11YT2_CYTH3
          Length = 259

 Score = 58.2 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           A++  +Q  +  +     +I        +C   G  IP+ R K+ P     +E +  +
Sbjct: 203 AFAARQQKFILQLENAYARIQNGTYG--ICIVTGKLIPKERLKLVPHTQHTIEAKEQR 258


>UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17
           RepID=A3JJC9_9ALTE
          Length = 111

 Score = 58.2 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           +A  V     +  I     +I+        C  CG PI   R ++ P    C+ C  
Sbjct: 57  QAGKVRADRQLRLIEAALLRIDNDEYG--DCRECGEPINPKRLEVDPTSLYCIHCAR 111


>UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3
           Tax=Anaeromyxobacter RepID=Q2IQL4_ANADE
          Length = 139

 Score = 58.2 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +  +  I+   ++I         C ACG P+   R +  P    C+ C
Sbjct: 86  RRELAEIDAALERIQQGRYGT--CLACGGPMGLQRLRAIPEARYCIAC 131


>UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 Tax=Bacteroidetes
           RepID=C7PES3_CHIPD
          Length = 348

 Score = 58.2 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            +  +   +  + +   +I        +C   G  I +AR +  P  TL +E +
Sbjct: 292 MASRQIQFIDHLEKALVRIENKTYG--ICRVTGKLIDKARLRAVPHATLSIEAK 343


>UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Desulfovibrio
           vulgaris RepID=Q72G22_DESVH
          Length = 176

 Score = 58.2 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
                +  +  +    +++ A+   V  CE CG  IP AR K  P   LCV CQ   E
Sbjct: 105 LLHRAEHRIGLLENALRRLEAYDYGV--CEGCGEDIPVARLKASPATRLCVFCQQESE 160


>UniRef50_A9ID32 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM
          12804 RepID=A9ID32_BORPD
          Length = 94

 Score = 58.2 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 4  EADEAYSVTEQLTMTGINRIRQKINAHGIPVYL--CEACGNPIPEARRKIFPGVTLCVEC 61
          + + A  + E      +  +R +++          C  CG+ I  AR  + PG   C++C
Sbjct: 21 QYELAARLAEDERAAALEAVRARMSQEVRGSADGNCLDCGDAIAPARLAVLPGAARCMDC 80

Query: 62 QAYQERQRKHYA 73
          Q   E+Q+  +A
Sbjct: 81 QTAHEKQQTRHA 92


>UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9
           Tax=Gammaproteobacteria RepID=A8GD52_SERP5
          Length = 141

 Score = 58.2 bits (140), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           DEAD+A               E   +  I+    +++        C   G PI  AR  +
Sbjct: 59  DEADKAAREEDLRLLFRQLDRESRLLPKISAALTRLHNGEYG--YCRESGEPIGLARLLL 116

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P   L +E +  QE +  H
Sbjct: 117 RPTAELSIEAKTAQEMREPH 136


>UniRef50_A9N2T0 Putative uncharacterized protein n=1 Tax=Salmonella enterica
          subsp. enterica serovar Paratyphi B str. SPB7
          RepID=A9N2T0_SALPB
          Length = 84

 Score = 57.8 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 37/68 (54%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          + A + T   T  GIN IR K+++      +CE CG  IP AR+   PGV LC  CQ  +
Sbjct: 8  EMAQASTAIFTQRGINAIRAKVHSLRPSKEICECCGADIPAARQLAVPGVELCAACQDVK 67

Query: 66 ERQRKHYA 73
          E+Q  H A
Sbjct: 68 EKQDVHRA 75


>UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=Rhizobium etli GR56
           RepID=UPI00019074B1
          Length = 128

 Score = 57.8 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+            +  I+   +++         C  C  PI  AR    P    C  C 
Sbjct: 62  DQVLMEMRREAGAQIQLIDAALERLKHGTFGR--CVTCLAPIETARLDAIPYTPYCATCA 119

Query: 63  AYQERQR 69
              + +R
Sbjct: 120 RLADERR 126


>UniRef50_B6ICF8 TraR protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF8_ECOSE
          Length = 74

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+DE +   S    L    I RIRQ++   GI    C+ CG P+P  RR++ PGV  CV 
Sbjct: 1  MADEIERFQSHQAMLEADRIQRIRQQLT--GISALFCDDCGAPVPAERRRLIPGVRKCVG 58

Query: 61 CQAYQERQRKHY 72
          CQ  QE Q +HY
Sbjct: 59 CQEVQEIQARHY 70


>UniRef50_A4XQ42 Transcriptional regulator, TraR/DksA family n=11
          Tax=Proteobacteria RepID=A4XQ42_PSEMY
          Length = 88

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D      +      I R R ++      +  CE C   IPEARR+  PGV LCV+CQA  
Sbjct: 9  DAVQEQIDSSIEDAIARARSQLPKGE-SLRHCEECDAVIPEARRQAIPGVRLCVKCQAEH 67

Query: 66 ERQRKHYA 73
          +R+   Y+
Sbjct: 68 DRENAAYS 75


>UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR family n=2
           Tax=Cystobacterineae RepID=Q1D0G7_MYXXD
          Length = 130

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 19/46 (41%)

Query: 17  MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           +  + +   K+         CE CG+ IP  R +  P    CV CQ
Sbjct: 66  LARVLKALGKLRDDPDAFGECEECGDEIPLGRLRAMPYAEFCVTCQ 111


>UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 Tax=Rhodobacterales
           RepID=A1B0I3_PARDP
          Length = 106

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  +A     Q  +  I+   ++I++       C  CG+ I  AR  + P   LC  C 
Sbjct: 46  DEVLQALGHAHQAELNRIDAALRRIDSGDYG--FCAGCGDVILPARLDLLPDTPLCAHCA 103

Query: 63  A 63
           A
Sbjct: 104 A 104


>UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus
           Poribacteria sp. WGA-A3 RepID=D2MJ83_9BACT
          Length = 123

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   +           I+     +        +C  C   I E R  + P   LCVECQ 
Sbjct: 51  EMGISLQEKRNRERQMIDEALVSLEEGTYG--ICVECNTEISEKRLAVMPFARLCVECQE 108

Query: 64  YQERQRK 70
             E   K
Sbjct: 109 KIELLEK 115


>UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 Tax=Rhizobiaceae
           RepID=A6U730_SINMW
          Length = 114

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           SDE  E   +  Q  +  I+    +I A      +C  CG+ I   R +  P   LC  C
Sbjct: 48  SDEVLEGLGLAGQGEIRAIDAALNRIEAGTFG--ICARCGDAISPERLRAVPHAPLCQTC 105

Query: 62  QAYQ 65
            A  
Sbjct: 106 AAEL 109


>UniRef50_A7ZJE9 Phage/conjugal plasmid C-4 type zinc finger protein, TraR family
          n=45 Tax=root RepID=A7ZJE9_ECO24
          Length = 73

 Score = 57.8 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D A  + E    T I    +++N   I    C  CG+PI E RR +  G   C  
Sbjct: 1  MADIIDSASEIEELQRNTAIK--MRRLNHQAISATHCCECGDPIDERRRLVVQGCRTCAS 58

Query: 61 CQAYQERQRKHY 72
          CQ   E   K  
Sbjct: 59 CQEDLELISKQR 70


>UniRef50_P41039 Uncharacterized protein ybiI n=135 Tax=Proteobacteria
          RepID=YBII_ECOLI
          Length = 88

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D             I R R +I      +  CE CG PIP+ARR+  PGV LC+ CQ  +
Sbjct: 9  DAVNEQINSTIEDAIARARGEIPRGE-SLDECEECGAPIPQARREAIPGVRLCIHCQQEK 67

Query: 66 ERQRKHYA 73
          + Q+  Y 
Sbjct: 68 DLQKPAYT 75


>UniRef50_C4LBC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Tolumonas
          auensis DSM 9187 RepID=C4LBC7_TOLAT
          Length = 76

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 28/73 (38%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          MSD  D A  + +Q     + R  + +    +    C  C  PIP  R         CVE
Sbjct: 1  MSDVVDRANDLVQQRLDDEMARRHRDVEKPLVIHRFCFDCEQPIPAERLASIQSAKRCVE 60

Query: 61 CQAYQERQRKHYA 73
          CQA  E Q    A
Sbjct: 61 CQALFEEQEAIRA 73


>UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinomycetales
           RepID=A4F8B9_SACEN
          Length = 125

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +      +  +  ++R   +++     +  CE CG+PI   R +  P  T C+ C  ++
Sbjct: 68  QGLLADARRDLEALDRAAARLDDGTYGL--CERCGSPIAPERLEALPATTTCIACATHR 124


>UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3
           Tax=Anaeromyxobacter RepID=B8J655_ANAD2
          Length = 122

 Score = 57.4 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQLTMT-----------GINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D  D A +   +                +     +++A       C +CG PI  AR +
Sbjct: 43  PDPNDRATAEERRNWALRLRDRDRRLLGKVQAALARLDAGTFGT--CTSCGAPISAARLR 100

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
             P   LC+ C+   ER  +  
Sbjct: 101 ARPVTDLCIACKTEAERVERPR 122


>UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2
           Tax=Gammaproteobacteria RepID=B8GMT5_THISH
          Length = 132

 Score = 57.1 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
             +  +     +I        +C  CG+ I   R   +P    C  CQA  E+
Sbjct: 72  EEVRDVEAALLRIAGQSYG--ICTDCGDAIAYERLDAYPTAKRCARCQAQHEK 122


>UniRef50_B6YQN7 DnaK suppressor protein n=1 Tax=Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2 RepID=B6YQN7_AZOPC
          Length = 125

 Score = 57.1 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 10/67 (14%)

Query: 8   AYSVTEQLTMTG--------INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           A S  E   +          +    ++I        +C   G  IP+ R +  P  TL +
Sbjct: 61  ALSREETNRLAQRQLQFMQSLKAALKRIENKTYG--ICRITGELIPKKRLRAVPHSTLSI 118

Query: 60  ECQAYQE 66
           E +  +E
Sbjct: 119 EAKKKKE 125


>UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QJK4_DESAH
          Length = 114

 Score = 57.1 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            +EA     ++T++ + R   +I        LC AC  PIP AR  I P   LCV+C 
Sbjct: 54  MNEAALKRARITLSKLERALARI--GSPDFGLCSACEEPIPFARLMILPETELCVKCA 109


>UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           vulgaris str. 'Miyazaki F' RepID=B8DLC7_DESVM
          Length = 119

 Score = 57.1 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
              +  +  +    ++++        C+ CGN IP AR    P  T CV C + +E +  
Sbjct: 55  QRTETRLQVLRATLERLDDEDFG--YCDDCGNEIPAARLLAVPTTTRCVHCMSAREERGA 112

Query: 71  H 71
            
Sbjct: 113 Q 113


>UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11 Tax=Chlorobiaceae
           RepID=B3ELW2_CHLPB
          Length = 147

 Score = 57.1 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 10/71 (14%)

Query: 1   MSDEADEAYSVTEQLT--------MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   E     ++          +  I++  ++I      V  C   G PIP+ R +  
Sbjct: 74  MADHGTETMDREQRFMFIARDEKYLGYIDQALERIRNKTYGV--CAKSGKPIPKKRLEAV 131

Query: 53  PGVTLCVECQA 63
           P  ++ +E + 
Sbjct: 132 PHTSVRIEFKE 142


>UniRef50_A1SED9 Putative DnaK suppressor protein n=1 Tax=Nocardioides sp. JS614
          RepID=A1SED9_NOCSJ
          Length = 92

 Score = 57.1 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          D          + T+  I+  R +++        C  CG  IP  R +  P    CV C
Sbjct: 33 DPVVAVQRGALKQTIAEIDAARGRLSDGTFGT--CTGCGGAIPADRLEFRPWAGTCVSC 89


>UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes
           RepID=Q7MQQ3_WOLSU
          Length = 113

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
             +  +  +  +     +I++      +C+ C  PIP  R    P  T+CV+C   +
Sbjct: 58  LLLDLEARLKKLEYALTRIDSPDFG--ICQICDEPIPYKRLFALPEATICVDCANER 112


>UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus
           asiaticus 5a2 RepID=B3ES66_AMOA5
          Length = 138

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
             E      +     +IN        CE  G+PI   R   FP      E Q  ++
Sbjct: 81  QNEDFLKREVEDALYRINLGTYG--YCEETGDPIGVRRLLAFPMARYTTEVQKQKD 134


>UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 Tax=Streptomyces
           RepID=C9NIY3_9ACTO
          Length = 131

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           +     +  +  ++R  +++         CE C  PIP  R ++ P  T CV C A
Sbjct: 74  SLLARARDHLAEVDRALERLERGDYGR--CERCREPIPPGRLEVRPAATTCVRCAA 127


>UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1
           Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPY8_THISH
          Length = 114

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E  +A     +  +  ++   +++N       +C ACG  IPEAR KI P   LC  C +
Sbjct: 52  EVVDALGNEARRELARVHEALKRMNEGEYG--ICAACGEAIPEARLKILPQARLCAACAS 109

Query: 64  YQE 66
            QE
Sbjct: 110 RQE 112


>UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter keddieii DSM 10542
           RepID=D1BG79_SANKS
          Length = 129

 Score = 56.7 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
            +  ++    +I A       C  CG PI   R +  P   LC++C  
Sbjct: 80  QLEEVDGALARIAAGTYGT--CTRCGRPISAGRLEARPSAPLCIDCAR 125


>UniRef50_Q48285 Haemophilus somnus cryptic prophage genes, capsid scaffolding
          protein n=1 Tax=Histophilus somni RepID=Q48285_HAESO
          Length = 76

 Score = 56.7 bits (136), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A   TE +    I + +QK       V  C  C   IPE R+K   G   C++
Sbjct: 1  MTDQVDRANEYTEIMQQLAIQKHQQKTREKS-TVKYCLDCQEEIPEIRQKN--GYCRCID 57

Query: 61 CQAYQERQRKHY 72
          CQ   E+ ++ Y
Sbjct: 58 CQRIIEKHQRIY 69


>UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=D2B0C3_STRRD
          Length = 110

 Score = 56.7 bits (136), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A  V+ +  +  + +  + +         C+ CG  IP  R K  P    C+ CQ   E
Sbjct: 51  LADIVSAERNLAVVRQALRDVTELTYGR--CDGCGLAIPFERLKARPLARFCMLCQRRHE 108

Query: 67  RQ 68
            +
Sbjct: 109 SR 110


>UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus halophilus
           RepID=A1DZZ7_SPOHA
          Length = 227

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
           E D A     +  ++ I     ++ A      +CE  G PIP  R + FP   
Sbjct: 60  EKDIALLGHLKEELSDIEYSLNQMKAGKYG--ICEKTGKPIPNERLEAFPTAR 110


>UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 Tax=Micrococcineae
           RepID=B8H9G6_ARTCA
          Length = 118

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 2/57 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           A        +  +     +I         C  CG PI E R +  P    C++  A 
Sbjct: 61  ALLNQSSAGLDQVEAALTRIADGTYGS--CAVCGRPIAEGRLEARPWTPYCIDHAAA 115


>UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 Tax=Variovorax
           paradoxus S110 RepID=C5CLF2_VARPS
          Length = 130

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
           A    +   +  I   R+++         C  CG  IP  R +  P    C+ECQ   ER
Sbjct: 61  AEVERDVSELRDIEAARERLRTGEFGT--CIDCGVQIPLDRLEAMPASARCLECQQRHER 118

Query: 68  QR 69
             
Sbjct: 119 TH 120


>UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales RepID=A3X4N5_9RHOB
          Length = 104

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E   + E   +  I+    ++         C+ CG+ I   R  + P    C  C 
Sbjct: 46  DEVLETLGLNELEEVRQIDAALARLVEGSYG--YCQICGDEIAAKRLDLVPATPFCSGCA 103

Query: 63  A 63
           +
Sbjct: 104 S 104


>UniRef50_A4TVR6 DnaK suppressor protein n=3 Tax=Magnetospirillum
          RepID=A4TVR6_9PROT
          Length = 76

 Score = 56.3 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D+ D A    +      +  +  +  +      +C ACG  I   R +  P    C EC 
Sbjct: 2  DDIDCAAERIDAFNAVALQAVLAR-TSGAPSSGICRACGCDIEPERLRATPHARHCKECA 60

Query: 63 AYQERQRKHY 72
          A  E + + +
Sbjct: 61 AEIEAENRRH 70


>UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 Tax=Desulfovibrio
           vulgaris RepID=A1VFA5_DESVV
          Length = 118

 Score = 55.9 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            A     +  +  +     + +        C+ CG+ I   R    P   LC+ C   +E
Sbjct: 55  RANIEQLKGRLRSLRTALARTDDEEFG--WCDECGDAIGVQRLLSVPTTRLCIACARRRE 112

Query: 67  RQ 68
            Q
Sbjct: 113 DQ 114


>UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6FZV7_9DELT
          Length = 130

 Score = 55.9 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           M+     + +      +  I      I+       +CE C  PI   R ++ P V++CV+
Sbjct: 49  MTQSIASSRNRERAQKLAAIREALLLIDEDPEEYGMCEDCEEPIKRRRLELMPWVSVCVQ 108

Query: 61  CQAYQERQRK 70
           CQ  +ER  +
Sbjct: 109 CQEKRERDGR 118


>UniRef50_Q3Z6R5 DnaK suppressor protein, putative n=5 Tax=Dehalococcoides
           RepID=Q3Z6R5_DEHE1
          Length = 123

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
            A        +        K +     +  CE C  PI  AR +  P   LC++C++  
Sbjct: 63  LAMEKKLLDQIAETEYALDKYDRGVYGL--CEMCKEPIDPARLEALPQARLCMQCKSKA 119


>UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. GAI101
           RepID=B7RRT7_9RHOB
          Length = 107

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E+  +  Q  +  +NR   +I        +C+ CG+ I + R +      LC  C 
Sbjct: 47  DEVLESLGLAAQKEIMLLNRAITRIENGSYG--ICKKCGDQISKERLEAVLYTQLCKRCA 104

Query: 63  A 63
           A
Sbjct: 105 A 105


>UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 Tax=Desulfovibrio
           vulgaris RepID=A1VGY3_DESVV
          Length = 113

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
            +E    T +  + G+    +++         C  CG  IP AR    P  + CV C  
Sbjct: 55  VNEVALATARKRLAGLEYAVKRLGDDDPEYGYCVECGEAIPFARLMSMPEASRCVNCAE 113


>UniRef50_A3HVW0 DnaK suppressor protein, putative n=2 Tax=Bacteroidetes
           RepID=A3HVW0_9SPHI
          Length = 127

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 2/54 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            +  +Q  +  +     +I      V  C   G  I + R K  P     +E +
Sbjct: 72  LAARQQKFIINLENALVRIKNGTYGV--CVDTGKLISKERLKAVPHTMHSIEAK 123


>UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2
           Tax=Streptosporangineae RepID=D1ACI4_THECD
          Length = 121

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +++AD A     +     +    Q+I A       C  CG PI   R +  P    C+ C
Sbjct: 56  AEQADAALERLRRQR-NSVLAALQRIAAGTYGR--CVTCGKPIAAGRLEARPDAARCLTC 112

Query: 62  QAYQERQRK 70
           QA  +R R+
Sbjct: 113 QARYDRARR 121


>UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 Tax=Pelobacter
           propionicus DSM 2379 RepID=A1ATM0_PELPD
          Length = 145

 Score = 55.9 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 13/80 (16%)

Query: 3   DEADEAYSV-----------TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D+A S             E+  +  I+    +I      +         IP  R K 
Sbjct: 46  DIYDQASSERDRELGLLLGDREREKLHAIDEALLRIREGEYGICEECE--EEIPLGRLKA 103

Query: 52  FPGVTLCVECQAYQERQRKH 71
            P    CV C++  E+ +  
Sbjct: 104 LPFARHCVRCKSDLEKLQAQ 123


>UniRef50_C9R760 Putative uncharacterized protein n=1 Tax=Aggregatibacter
          actinomycetemcomitans D11S-1 RepID=C9R760_AGGAD
          Length = 72

 Score = 55.5 bits (133), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTM--TGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          M+D  D+     E +           Q+          C  CG  I  +R K  P    C
Sbjct: 1  MNDIVDKTQQRQEIMWANWRKQQVSAQQFAVAMNTARYCIDCGVLIHPSRVKAMPHCVRC 60

Query: 59 VECQAYQERQRK 70
          + CQ   E  +K
Sbjct: 61 ISCQQLHEESQK 72


>UniRef50_Q8EDR9 C4-type zinc finger protein, DksA/TraR family n=1 Tax=Shewanella
          oneidensis RepID=Q8EDR9_SHEON
          Length = 71

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIR----QKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M D+ D A  V +Q     ++R R    ++ + +      C  CG  I   R    P   
Sbjct: 1  MIDQFDRAQEVEQQFRDNALSRQRKHKVEQPDINNKGERCCLDCGVVIEARRLVFMPTAV 60

Query: 57 LCVECQAYQER 67
           CVECQ  +ER
Sbjct: 61 RCVECQTAKER 71


>UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella
           woodyi ATCC 51908 RepID=B1KG10_SHEWM
          Length = 115

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 13/69 (18%)

Query: 3   DEADEAYS-----------VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKI 51
           D  D A              +++  ++ I R   ++      +  CE  G PI   R  +
Sbjct: 49  DAVDLASQIAAQRAAHSVLESQRQQLSEIERAMARLKVGTYGL--CEQTGEPIGFERLAV 106

Query: 52  FPGVTLCVE 60
            P     V 
Sbjct: 107 LPWARHTVT 115


>UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BI57_9GAMM
          Length = 123

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
                   +       ++I+        C  CG  I  +R +  P  + C+ CQ+  E +
Sbjct: 61  NLARHDEEIADCLAALKRIDEGDFG--FCLDCGEEIELSRLRACPTASRCIRCQSVLEAE 118

Query: 69  RKHYA 73
            +  A
Sbjct: 119 VRKTA 123


>UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=Oceanobacillus
           iheyensis RepID=Q8ENZ4_OCEIH
          Length = 116

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + D   ++  +  +  I    QKI      +   E  G PIPE R ++ P   L V  + 
Sbjct: 55  QRDAGLNLMRENQLKEIEDALQKIEDGTYGIS--EKSGEPIPEERLEVLPTARLLVSEEE 112

Query: 64  Y 64
            
Sbjct: 113 E 113


>UniRef50_B5TA71 Gp07 n=2 Tax=root RepID=B5TA71_9CAUD
          Length = 74

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 4  EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
          E + A  + +      I   R + +  G     C  CG PIP ARR   P  T C ECQ 
Sbjct: 6  EFELAQQIEQMQRDVAIELARAQCH--GAGAEECVECGEPIPAARRACVPYATRCTECQG 63

Query: 64 YQERQRKHY 72
            E++R  Y
Sbjct: 64 RFEQRRTGY 72


>UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4
           Tax=Hydrogenothermaceae RepID=B2V8G8_SULSY
          Length = 118

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 13/69 (18%)

Query: 2   SDEADEA-----------YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
           +DE + A               E+  +  I +  QKI        +CE+CG  IP  R K
Sbjct: 40  ADEMERAEAETSRILTLRNLDRERKLLKRIEQTLQKIEYGVYG--ICESCGAEIPYERLK 97

Query: 51  IFPGVTLCV 59
           + P  +LC+
Sbjct: 98  VRPIASLCI 106


>UniRef50_Q9MC51 Orf77 n=1 Tax=Pseudomonas phage D3 RepID=Q9MC51_BPD3
          Length = 67

 Score = 55.5 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D A    E+     +     ++   G  +Y CE CG  IP ARR++ PGV  C+ CQ
Sbjct: 2  DIVDIANDYAERELAERL---YSRVKYVGESLYECEDCGEEIPVARRELVPGVRKCLSCQ 58

Query: 63 AYQER 67
           Y E 
Sbjct: 59 EYLEE 63


>UniRef50_P44221 Uncharacterized protein HI1497 n=3 Tax=Haemophilus
          RepID=Y1497_HAEIN
          Length = 75

 Score = 55.5 bits (133), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQ------KINAHGIPVYLCEACGNPIPEARRKIFPG 54
          M+D  D+     E L    +           +++A       C  CG PIP  R +  P 
Sbjct: 1  MADVLDQLNEREEALLQNILAPHLDTELSDDEVDAIAEAGRQCSECGLPIPTTRLRANPF 60

Query: 55 VTLCVECQAYQERQR 69
             CV CQ   E  R
Sbjct: 61 AHRCVSCQQDWEEGR 75


>UniRef50_D1U4E4 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
          aespoeensis Aspo-2 RepID=D1U4E4_9DELT
          Length = 66

 Score = 55.1 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D  +   E      ++    +  A       C  CG PIPE RR   PGVTLCV 
Sbjct: 1  MPDFCDMGHEAEELARKAALSMAGTR-RADAPSRETCAECGAPIPEPRRVAVPGVTLCVA 59

Query: 61 CQAYQER 67
          CQA +E 
Sbjct: 60 CQAAKEE 66


>UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1 Tax=Syntrophomonas
           wolfei subsp. wolfei str. Goettingen RepID=Q0AYC5_SYNWW
          Length = 147

 Score = 55.1 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +       +  +  +N    ++      V  CEACG  I  AR +     TLC  C  
Sbjct: 54  ETNLGILEMLEYELEKVNDALSRLQNGQYGV--CEACGQKIEPARLERLVNTTLCTNCAR 111

Query: 64  YQERQRKHYA 73
            Q++  K  A
Sbjct: 112 SQQKGFKRPA 121


>UniRef50_D0KGB6 Transcriptional regulator, TraR/DksA family n=1
          Tax=Pectobacterium wasabiae WPP163 RepID=D0KGB6_PECWW
          Length = 79

 Score = 55.1 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 1  MSDEAD--EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MS + D   A + TEQL  + ++ I + ++   I    C+ACGN IPEARR   PGV LC
Sbjct: 1  MSHDLDDEMAMATTEQLLQSSLSLILRNVHNGRISNTCCDACGNEIPEARRLAVPGVELC 60

Query: 59 VECQAYQERQRK 70
          V CQ  +E   K
Sbjct: 61 VGCQEVEEHLTK 72


>UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesiocystis pacifica
           SIR-1 RepID=A6FXL2_9DELT
          Length = 132

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
               ++  +  +     ++        +CE    PIP  R ++ P     V  Q   E +
Sbjct: 61  LLTRDRARLAEVEAALSRVAEGEYG--ICEESDEPIPFRRLELEPTTRYTVAAQEALEAE 118

Query: 69  R 69
            
Sbjct: 119 G 119


>UniRef50_Q1VTU7 General stress protein, DnaK suppressor DskA n=1 Tax=Psychroflexus
           torquis ATCC 700755 RepID=Q1VTU7_9FLAO
          Length = 127

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 22  RIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           R   KI      +  C+ C   IP AR +I PG   CV C
Sbjct: 82  RAMDKIEEGTYGL--CDVCKKEIPRARLEIVPGALSCVVC 119


>UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes RepID=D0JAK5_BLASB
          Length = 131

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK 70
              Q  +  +N    ++        +C      IP+ R    P  TL +E +   E++ K
Sbjct: 74  EHLQKFINSLNAALIRVENKDYG--ICRITKKLIPKGRLMAVPHTTLSIEGKKLVEKRNK 131


>UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           aespoeensis Aspo-2 RepID=D1U5V5_9DELT
          Length = 111

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A     ++ +  +    ++++       LC  C  PIP AR K  P    CV+C  
Sbjct: 57  AQLSKTRVRLARLGEALRRVDDDED-FGLCIDCSKPIPMARLKAMPETQYCVDCAE 111


>UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Saccharopolyspora
          erythraea NRRL 2338 RepID=A4FJQ8_SACEN
          Length = 56

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
               +  +  I     ++      +  C ACG+ IP       P  TLC+ CQ 
Sbjct: 1  MMRGARRALADIEVALARMRDGMYGL--CRACGSDIPLQLLTAIPKTTLCLSCQR 53


>UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=A7HEW6_ANADF
          Length = 130

 Score = 55.1 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 23/56 (41%)

Query: 13  EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +   +  I+R   K+ +      LCE C   I   R  + P  T C  CQA  E +
Sbjct: 63  QAELVARIDRALAKLASAPEDFGLCEDCEEEIAPGRLAVMPYATRCPACQAKTEPR 118


>UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFB9_DESAH
          Length = 177

 Score = 54.8 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQER 67
             +  +    ++I+        C   GN I   R ++ P  TL VE Q   ER
Sbjct: 78  KKLKQVMLALERIDEGNFG--YCLLSGNRIGLNRLEVLPWATLAVETQEMLER 128


>UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50 Tax=Bacteroidetes
           RepID=A5FM28_FLAJ1
          Length = 126

 Score = 54.8 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1   MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           MS EA+   ++ ++  +  +     ++        +C+  G  I + R KI P  T+ +E
Sbjct: 63  MSKEANSQLAIRQEKFIRDLKNALFRVENKTYG--ICKVTGKLISKERLKIVPHATMSIE 120

Query: 61  CQAYQ 65
            +  Q
Sbjct: 121 AKNLQ 125


>UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 Tax=Micrococcineae
           RepID=D1C0D4_XYLCX
          Length = 157

 Score = 54.8 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E +       +  +       ++I A       CE  G PI +AR + FP  TL VE +A
Sbjct: 95  EQELTLVNNMRDLLAQTKHAIERIKAGTY--ATCEMTGLPIGKARLQAFPRATLSVEAKA 152

Query: 64  YQERQ 68
            +ER+
Sbjct: 153 REERR 157


>UniRef50_A0YAF5 DnaK suppressor protein n=1 Tax=marine gamma proteobacterium
           HTCC2143 RepID=A0YAF5_9GAMM
          Length = 106

 Score = 54.8 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E       L +  I    +KI+        C  CG  I   R K  P    CV C 
Sbjct: 46  DEVLEEIGRETSLAIQEIRSALEKIDNKTYGK--CSNCGEAINPIRLKAIPETIHCVSCA 103

Query: 63  AY 64
           + 
Sbjct: 104 SK 105


>UniRef50_UPI000190AE5D hypothetical protein Salmoneentericaenterica_13393 n=2
          Tax=Salmonella enterica subsp. enterica serovar Typhi
          RepID=UPI000190AE5D
          Length = 75

 Score = 54.8 bits (131), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 1  MSDEADEAYSVTEQL-----TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGV 55
          MS + D++ +  E           I     +I    +    C  CG+ IP++RR+  PGV
Sbjct: 1  MSIDVDDSMAQNESQVNIDNRFAEIRAAL-RIK-GHVSRRHCRDCGDEIPDSRRESIPGV 58

Query: 56 TLCVECQAYQERQRK 70
          +LC+ CQ ++E   K
Sbjct: 59 SLCMYCQEWRESGDK 73


>UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           vulgaris str. 'Miyazaki F' RepID=B8DQJ2_DESVM
          Length = 142

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
                     +  I  + + +++    V  C+ACG+ IP  R    P   LCV CQ  QE
Sbjct: 69  MTLLDRAGRRIREIEGVLRAMDSRDYGV--CDACGDDIPLPRLLARPTTRLCVHCQMEQE 126


>UniRef50_Q144T3 Transcriptional regulators, TraR/DksA family n=2 Tax=Burkholderia
           RepID=Q144T3_BURXL
          Length = 126

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E  +A     +  +  I R  QKI      +   +  G PIP+AR +  P     VE Q+
Sbjct: 63  EVSQALRDVNEHRIADIQRALQKIEQGTYGLS--DESGLPIPKARLEATPEAIFTVEEQS 120

Query: 64  YQE 66
            +E
Sbjct: 121 RRE 123


>UniRef50_Q602X1 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus
          RepID=Q602X1_METCA
          Length = 91

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 16/86 (18%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYL----------CEACGN------PI 44
          M D AD +    E   + GI  +   +      V +          C  C N      PI
Sbjct: 1  MPDLADLSDERIEIERVAGIRAVLDSMRPDTPQVVIPGEDGLPMVVCYDCLNEYEVITPI 60

Query: 45 PEARRKIFPGVTLCVECQAYQERQRK 70
          P  R         C++CQ   ER+ K
Sbjct: 61 PPERLAANEHAIRCIDCQIEHEREAK 86


>UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium
           ochraceum DSM 14365 RepID=D0LJW3_HALO1
          Length = 142

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 13/82 (15%)

Query: 2   SDEADEAYSVTEQ-----------LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DE D+A     Q             +  + R  QK+      V  CE  G PI   R  
Sbjct: 63  PDEGDQASQNANQAYLLRYADKQNKQLQQVRRALQKLQTGEYGV--CEGSGEPIGVQRLM 120

Query: 51  IFPGVTLCVECQAYQERQRKHY 72
           + P     VE +   +R+R+H 
Sbjct: 121 LRPWTRYSVEYKEQIDRERRHR 142


>UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata
           D2 RepID=A4CBE2_9GAMM
          Length = 103

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D+         +  +  +N+  + ++     V  C+ C   I  AR +  P    C++C 
Sbjct: 46  DQVLNTIRNEAKSELQLVNQAIENLHQGHYGV--CQQCLKAIAPARLEALPYTQTCIDCA 103


>UniRef50_C5S4P2 Putative uncharacterized protein n=2 Tax=Pasteurellaceae
          RepID=C5S4P2_9PAST
          Length = 77

 Score = 54.4 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 8/74 (10%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQK------INAHGIPVYLCEACGNPIPEARRKIFPG 54
          MSD+ D      EQL    +    +       I    +    C  CG PIP  R +  P 
Sbjct: 1  MSDDVDRIMEQDEQLLSLQLAPHLENQLSDDEIEQIALSGRDCIECGLPIPIQRLRAVPF 60

Query: 55 VTLCV--ECQAYQE 66
             C+   CQ   E
Sbjct: 61 AVRCICCCCQQDYE 74


>UniRef50_Q52PP5 Putative uncharacterized protein n=1 Tax=Xanthomonas phage Xp15
          RepID=Q52PP5_9CAUD
          Length = 77

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVY-LCEACGNPIPEARRKIFPGVTLCVE 60
          +DE+D A  + E      I ++ +        V   C  C   IP+ R     G   C+ 
Sbjct: 5  TDESDLASKLEELAKEDAIQKVLRDGKVPSDWVSPDCYDCDQEIPKDRLAT--GAFRCIH 62

Query: 61 CQAYQERQRKHY 72
          CQ   E  +++Y
Sbjct: 63 CQTKFEFNQRNY 74


>UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
           RepID=C9YVQ5_STRSW
          Length = 132

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
              T +  +  I+    ++  H      C  C  PIP  R +I P    CV C+ 
Sbjct: 77  QRDTIERVLKEIDAAFVRVQEHTYGT--CLGCSKPIPVERLEILPYTRFCVPCRR 129


>UniRef50_Q0EWC9 Putative uncharacterized protein n=1 Tax=Mariprofundus
          ferrooxydans PV-1 RepID=Q0EWC9_9PROT
          Length = 73

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINA----HGIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D  D      E      ++R+R +             +C  C   IP AR    P   
Sbjct: 1  MADPCDMGSEREEISRQEALDRVRYRPLEAPLLDEEYRRICRDCECLIPSARLAAVPHAV 60

Query: 57 LCVECQAYQE 66
           C  CQ   E
Sbjct: 61 RCASCQEEHE 70


>UniRef50_A1SCC2 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614
           RepID=A1SCC2_NOCSJ
          Length = 127

 Score = 54.0 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D  + A+    +  +  +   R ++      V  C  C  PI   R +  P  T C++C 
Sbjct: 68  DPVEAAHRAAVEQIVDEVVTARHRLTVGLYGV--CTGCEEPIATERLEFRPWATTCIKCS 125

Query: 63  AY 64
             
Sbjct: 126 QR 127


>UniRef50_B0V602 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
          AYE RepID=B0V602_ACIBY
          Length = 72

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D+ D A  +  +          Q  +     +  CE CGN IP  R++ +  VTLCVE
Sbjct: 7  MTDKIDIAQELQLKQVQ------IQPKDFSRPSLTECEECGNDIPIERQR-YGSVTLCVE 59

Query: 61 CQAYQERQRKHY 72
          C+  QE+  K Y
Sbjct: 60 CKNTQEKLSKRY 71


>UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6QA93_SULNB
          Length = 116

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 2/54 (3%)

Query: 6   DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           D      ++  +        KI        +CE  G  IP  R +  P     V
Sbjct: 59  DNTLLKRQEDELKETQHALTKIKNGTYG--ICEKTGKSIPVERLEANPIARYVV 110


>UniRef50_C4WG44 Transcriptional regulator, TraR/DksA family n=1 Tax=Ochrobactrum
          intermedium LMG 3301 RepID=C4WG44_9RHIZ
          Length = 76

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          + A    EQ    GI   R  +         C  CG+ I   RR   P    CV+CQ   
Sbjct: 9  ELADMRAEQERDAGIAAARAPLKQT--GTLDCIRCGDEIEAERRAALPSARRCVDCQESF 66

Query: 66 ERQRKHY 72
          ER +   
Sbjct: 67 ERWQATR 73


>UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gammaproteobacteria
           RepID=A4A689_9GAMM
          Length = 106

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  +A  V  +  +  +     ++      V  C  CG  I  AR +  P  T C+ C 
Sbjct: 48  DEVVDAIGVETREAIVALKAALLRMEEGSYGV--CVECGGTIAAARLEARPEATHCINCA 105


>UniRef50_A1B365 Transcriptional regulator, TraR/DksA family n=35
          Tax=Proteobacteria RepID=A1B365_PARDP
          Length = 91

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINA--HGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
          D      E  T   I R+R +            CE C  PIPEARR+  PGV LCV+CQ+
Sbjct: 9  DAVNEQIEVSTQEAIERMRLRNAQRGDRESAAFCEECDEPIPEARRRAIPGVRLCVDCQS 68

Query: 64 YQERQRK 70
           ++R  +
Sbjct: 69 GRDRAWR 75


>UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax=Proteobacteria
           RepID=Q1NSE5_9DELT
          Length = 116

 Score = 53.6 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           +A S      +  I    ++I +       C  C + I + R +  P V  C++C    E
Sbjct: 57  QAASRLTSQELQRIQAAFKRIESGDYG--YCVVCQDEISQGRLRFDPSVLTCIDCARNAE 114

Query: 67  RQ 68
            +
Sbjct: 115 TK 116


>UniRef50_Q1ZD90 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3
           RepID=Q1ZD90_9GAMM
          Length = 129

 Score = 53.2 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 3/72 (4%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           S + D      +  ++  I+     ++     +  C  C   I   R K       C  C
Sbjct: 58  SKDIDLKALKDKIKSLKKIDAALSNLHLGMFGL--CSDCEEEIELERLKEDATQQRCQHC 115

Query: 62  QAYQERQR-KHY 72
                +Q  K Y
Sbjct: 116 AEKYNKQHFKQY 127


>UniRef50_B1FBH2 Transcriptional regulator, TraR/DksA family n=1 Tax=Burkholderia
           ambifaria IOP40-10 RepID=B1FBH2_9BURK
          Length = 127

 Score = 53.2 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           A++A        +  I R  +KI+         +  G+ IP  R +  P     V+ ++ 
Sbjct: 64  ANQALRNVNARRIADIQRALEKIDDGTYGYS--DESGDLIPVGRLEAVPEAVYTVDEESR 121

Query: 65  QERQR 69
           +E  R
Sbjct: 122 RESGR 126


>UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 Tax=Nakamurella
           multipartita DSM 44233 RepID=C8XJQ6_NAKMY
          Length = 117

 Score = 53.2 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
                Q  +  ++     ++A      +CE CG  I   R    P  T CV C   +
Sbjct: 63  MHRAAQQRVRDVDEALAALDAGRYG--ICERCGCAIAAGRLAALPTATRCVSCAGRR 117


>UniRef50_UPI0001C31ADF transcriptional regulator, TraR/DksA family n=1 Tax=Conexibacter
           woesei DSM 14684 RepID=UPI0001C31ADF
          Length = 115

 Score = 53.2 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E DE  +      +  I R  Q++        +    G PIP+AR +  P     V  QA
Sbjct: 52  ERDEGLAEQLHEQLAAIARAEQRVADGTYGRSI--DSGEPIPDARLEAVPWAERTVAEQA 109

Query: 64  YQERQR 69
             ER R
Sbjct: 110 AYERGR 115


>UniRef50_Q8H9Q7 ORF8 n=1 Tax=Vibrio phage VHML RepID=Q8H9Q7_9CAUD
          Length = 75

 Score = 53.2 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 5/72 (6%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQKINA-HGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          +D  D A ++++      +     +I    G+  + C  CG+ IP+ RR++  GVT CV+
Sbjct: 6  ADPLDRAAALSQ----AHLEVSLSRIKKFEGVSAHECVECGSEIPKKRRELLQGVTDCVD 61

Query: 61 CQAYQERQRKHY 72
          C A +E   K+Y
Sbjct: 62 CAAIKETLSKNY 73


>UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium
           retbaense DSM 5692 RepID=C8X5B5_DESRD
          Length = 112

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
            +     +  +  + +  ++++A      LC  CG  I   R    P   +C+ C  
Sbjct: 56  MSSLNKTKHRLARLEQALKRLDADDPEYGLCVECGEEIALKRLLALPESEVCIHCAE 112


>UniRef50_C9MPK9 Putative DnaK suppressor protein n=2 Tax=Prevotella
           RepID=C9MPK9_9BACT
          Length = 127

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            +  +Q  + G+     +I+     +      G  IP+ R ++ P  TL V  +      
Sbjct: 70  MAQRQQKFIKGLQAALVRIDNKTYGID--RITGELIPKERLRVVPHATLSVASKEA---- 123

Query: 69  RKHY 72
            KH+
Sbjct: 124 NKHH 127


>UniRef50_A4NCL4 Putative uncharacterized protein n=1 Tax=Haemophilus influenzae
          3655 RepID=A4NCL4_HAEIN
          Length = 78

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIR------QKINAHGIPVYLCEACGNPIPEARRKIFPG 54
          M+D  D+      Q+        R      + I         C+ CG  IP+AR    P 
Sbjct: 1  MTDILDQLVERESQIEALQQAARRINPLSAEAIQQIAEDGRNCDECGELIPKARLLAQPF 60

Query: 55 VTLCVECQAYQERQRKH 71
             CV+CQA  E+  K 
Sbjct: 61 ARCCVDCQALLEKTNKR 77


>UniRef50_B2I3M6 Putative uncharacterized protein n=3 Tax=Acinetobacter
          RepID=B2I3M6_ACIBC
          Length = 66

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D  D+A    + L    I     +    G     C  CG  IP  RR+   GV  C+E
Sbjct: 1  MTDLIDKAQESADYLLQQEIAN---RCRFEGESEKECVECGEEIP-ERRRALGGVKFCIE 56

Query: 61 CQAYQERQRK 70
          CQ   ER+R+
Sbjct: 57 CQTKLERKRR 66


>UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S312_9GAMM
          Length = 107

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  +A     + ++  I     KI         CE CG  I   R +  P    C+ C 
Sbjct: 49  DEVIDAIGNETRQSLHAIQVALDKIADGTYG--DCEKCGANIEAGRLQAIPESNCCMSCA 106


>UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax=Streptomyces
           viridochromogenes DSM 40736 RepID=UPI0001B515E7
          Length = 118

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 2   SDEADE---AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
            DEA++   A   T +  +  I+    ++      V  C+ C   IP  R +I P    C
Sbjct: 53  PDEAEQLMSAQRDTIERVLKEIDAAFARVQDRSYGV--CQGCSTRIPVERLEILPYTRFC 110

Query: 59  VECQA 63
           V CQ 
Sbjct: 111 VPCQR 115


>UniRef50_B0TKU6 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella
          halifaxensis HAW-EB4 RepID=B0TKU6_SHEHH
          Length = 68

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 31/67 (46%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          DE DE+  V  +     +     K+         C  CG  IPE RR+   GV LC++CQ
Sbjct: 2  DEGDESVRVQARALNQYLAGRATKLLVAKASASYCARCGEDIPEPRRQAVKGVQLCIDCQ 61

Query: 63 AYQERQR 69
             ER++
Sbjct: 62 TLSERKQ 68


>UniRef50_A7HD49 Transcriptional regulator, TraR/DksA family n=1
          Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HD49_ANADF
          Length = 102

 Score = 52.8 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 10 SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
          S   +  +  I+    +I         C  CG P+   R +  P    C+ C
Sbjct: 45 SELARRELADIDDALLRIQEGCYG--CCLNCGGPLGLQRLRAIPEARYCLAC 94


>UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 Tax=Beutenbergia
           cavernae DSM 12333 RepID=C5C3L5_BEUC1
          Length = 111

 Score = 52.4 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           A   + +     ++    +I      V  CE CG PIP AR ++ P    CV C
Sbjct: 59  ALIASAEHEREELDAALARIEDGTHGV--CERCGRPIPAARLEVRPAARTCVGC 110


>UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 Tax=Shewanella
           RepID=A1RF16_SHESW
          Length = 110

 Score = 52.4 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + +   +  +Q  +  I     +IN+       C  CG  I   R    P VT C+ C
Sbjct: 54  QMELETARRKQHQLQVIEGALLRINSDEYGS--CFVCGEDIDLNRLMFDPTVTRCINC 109


>UniRef50_Q9ZXI6 Orf39 n=3 Tax=root RepID=Q9ZXI6_9CAUD
          Length = 68

 Score = 52.4 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D+A    E +    +   ++           CE CG  IPEARR+  PG   C+ CQ
Sbjct: 2  DVIDQANERAENMVQAAL--AQRTNTRLAPSALWCEDCGEQIPEARRQAAPGCECCISCQ 59

Query: 63 AYQERQRKH 71
            +E   + 
Sbjct: 60 ELREHPARR 68


>UniRef50_B7V4J8 Repressor, PtrB n=8 Tax=Pseudomonas RepID=B7V4J8_PSEA8
          Length = 66

 Score = 52.4 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A  +        +    +   A       CE CG PIP+ARR+  PG + C++
Sbjct: 1  MADLADHANELVLARLDGLL--AARPALAIRESAEDCEDCGEPIPQARRRAAPGCSRCID 58

Query: 61 CQAYQERQ 68
          CQ   ER+
Sbjct: 59 CQDRHERR 66


>UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 Tax=Rhodothermaceae
           RepID=D0MD16_RHOM4
          Length = 149

 Score = 52.4 bits (125), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 10/70 (14%)

Query: 1   MSDEADEAYSVT--------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIF 52
           M+D   +A            +Q  ++ ++R  ++I        +C+  G PIP  R +  
Sbjct: 78  MADAGTDAMEREKLFLMIARQQKYISHLDRALERIKNKTYG--ICKVTGKPIPRERLEAV 135

Query: 53  PGVTLCVECQ 62
           P   + +E +
Sbjct: 136 PHTEVSIEAK 145


>UniRef50_C6XZU8 DnaK suppressor protein n=4 Tax=Bacteroidetes RepID=C6XZU8_PEDHD
          Length = 126

 Score = 52.1 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
            +  ++  +  +     +I        +C   G  I + R +  P  TL +E +
Sbjct: 71  LAARQKKFIENLEAALVRIENKTYG--ICRETGKLIQKERLRAVPHATLSMEAK 122


>UniRef50_Q020R1 Serine phosphatase n=1 Tax=Candidatus Solibacter usitatus
          Ellin6076 RepID=Q020R1_SOLUE
          Length = 328

 Score = 52.1 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 16 TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
           +  I+    +I        +CE+C + I + R    P +  C++  +  E +   
Sbjct: 38 LIAEIDAALARIEHGQFG--ICESCHDSIEQDRLAHNPLIRFCLDHLSQAELRAHQ 91


>UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SL78_9BACT
          Length = 144

 Score = 52.1 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQR 69
            T+ L +  + +  Q+I+A    V +         E R +  P    C EC+   E++ 
Sbjct: 84  ETDALKLRLVEQALQRIDAGSYGVCIECEEDIE--EKRLEYVPFARYCTECKTELEKKG 140


>UniRef50_B7J8S5 Putative uncharacterized protein n=1 Tax=Acidithiobacillus
          ferrooxidans ATCC 23270 RepID=B7J8S5_ACIF2
          Length = 104

 Score = 52.1 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 2  SDEADEAYSVTEQLTMTGINRIRQ------KINAHGIPVYLCEACGNPIPEARRKIFPGV 55
          SD  D A  + EQ     ++  RQ      K +        C  C + IP  R +     
Sbjct: 6  SDILDIAADLAEQERAWRVSVARQAMQASEKPDEDVAGNRYCLDCADVIPPERVQAV-QA 64

Query: 56 TLCVECQAYQERQR 69
            CV C   +E++ 
Sbjct: 65 VRCVVCAGIREKKA 78


>UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SL94_9BACT
          Length = 113

 Score = 52.1 bits (124), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
             E+    +++ +  +     +I      +  C  C   IPE R KI P  T+C++C   
Sbjct: 54  ISESNLRNKRMRLQRLEAALLRIARGSFGL--CSVCEEDIPEKRLKIAPESTVCMDCMRE 111

Query: 65  Q 65
           Q
Sbjct: 112 Q 112


>UniRef50_A8R990 Putative uncharacterized protein n=2 Tax=unclassified T4-like
          viruses RepID=A8R990_9CAUD
          Length = 85

 Score = 51.7 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
              E +    I   R+++         C  C   IPEARR+   GV  C+ CQ+  +  
Sbjct: 12 QLEMEAVVQAAIVHARKQVAVERESAKYCFDCDEEIPEARRQAIKGVIYCIGCQSMHDEI 71

Query: 69 RKH 71
           K 
Sbjct: 72 FKR 74


>UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteria
           RepID=C3KFN9_PSEFL
          Length = 119

 Score = 51.7 bits (123), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            ++A     Q     + +  ++ +        C  CG  I   R    P   LC+ C + 
Sbjct: 58  MNDAIRGRAQHERVRLQQALKRWHKGEYG--WCNQCGALIALGRLVFDPATPLCITCASR 115

Query: 65  QE 66
            E
Sbjct: 116 VE 117


>UniRef50_Q06424 Uncharacterized 8.2 kDa protein in gpA 5'region n=21 Tax=root
          RepID=YO82_BPP2
          Length = 74

 Score = 51.7 bits (123), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M D  D       +L    IN    ++   G    +CE C  PIP ARR  +P  T CV 
Sbjct: 1  MPDNVDFIQEQQAELLERQINAA--RVKHCGASALVCEECDAPIPAARRAAYPSATRCVS 58

Query: 61 CQAYQERQRKHY 72
          CQ+  E + KHY
Sbjct: 59 CQSVFEAKNKHY 70


>UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xanthus DK 1622
          RepID=Q1CWM4_MYXXD
          Length = 101

 Score = 51.7 bits (123), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 2/53 (3%)

Query: 11 VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
            E   +  I     +I         C  CG  I   R +  P    C+ C A
Sbjct: 48 QAEAQELRDIEEALTRIAHGEFGR--CARCGGAIGRHRLRAVPEARHCLTCAA 98


>UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LT72_DESBD
          Length = 110

 Score = 51.7 bits (123), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 14  QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + T+  + R   +++     V  C  CG  I   R  + P  TLCV+C  
Sbjct: 63  RRTLMRLERALDRVDDEHFGV--CAECGEDIAVGRLLVMPEATLCVDCAE 110


>UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 Tax=Shewanella
           RepID=B1KFH6_SHEWM
          Length = 131

 Score = 51.7 bits (123), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 3/61 (4%)

Query: 9   YSVTEQLTMTGINRIRQKINA---HGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
                Q +   + +   +I            C  CG PI   R  I P   +C+ CQ+  
Sbjct: 69  QQEMAQASEVLMQQHIVRIKQIFLDTDEYGFCLECGEPIGLGRLTIHPTAEMCIGCQSEA 128

Query: 66  E 66
           E
Sbjct: 129 E 129


>UniRef50_A5EYQ4 DksA-like zinc finger domain containing protein n=8 Tax=root
          RepID=A5EYQ4_VIBC3
          Length = 69

 Score = 51.3 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI--PVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D  D+A     +     +   R +            C  C +PIP+ R++   G   C  
Sbjct: 2  DVIDDAAKTEAKFQQMALANHRARAMQTAYLPSRTHCLECDDPIPKERQEKVKGCQYCTP 61

Query: 61 CQAYQERQ 68
          CQA +E++
Sbjct: 62 CQAAKEQR 69


>UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3
           Tax=Alphaproteobacteria RepID=Q2GBE3_NOVAD
          Length = 104

 Score = 51.3 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D + E+ ++  +  +  ++R  ++I A       C  CG  I  AR +  P   LC++C 
Sbjct: 43  DASLESQALLLRRQIASVDRALERIAAGTYG--ECIRCGGEIAPARLEARPEAALCIDCA 100

Query: 63  AYQ 65
             +
Sbjct: 101 RQE 103


>UniRef50_Q1QXM4 Transcriptional regulators, TraR/DksA family n=3
           Tax=Gammaproteobacteria RepID=Q1QXM4_CHRSD
          Length = 106

 Score = 51.3 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE         +  +  + R   +++        CE CG  I   R +  P  T C  C 
Sbjct: 47  DEVIARLEDEARTELAQVERALARLDTGV--GDHCEICGGLIAPERLEALPYTTRCKACA 104

Query: 63  AY 64
             
Sbjct: 105 DR 106


>UniRef50_A4XZG1 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudomonas
          mendocina ymp RepID=A4XZG1_PSEMY
          Length = 72

 Score = 51.3 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPG--VTLC 58
          M+D  D A           +      +         CE CG+PIP  R +         C
Sbjct: 1  MADAVDIANDRMLDELDRRLANHA--LARQCPVAEECEDCGDPIPFERVQALAKLPCLRC 58

Query: 59 VECQAYQERQR 69
          VECQ Y ER+ 
Sbjct: 59 VECQGYHERKG 69


>UniRef50_B7QWI5 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11
           RepID=B7QWI5_9RHOB
          Length = 107

 Score = 51.3 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
                I++   +++A  +    C  CG+ I E      PG + C  C
Sbjct: 61  ELRRDIDQALARVDAGSVG--YCNICGDRITEGHLAAHPGTSFCAAC 105


>UniRef50_C8N773 TraR/DksA family transcriptional regulator n=1
          Tax=Cardiobacterium hominis ATCC 15826
          RepID=C8N773_9GAMM
          Length = 69

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D AD+A  + E           ++          CE CG+PIPEARR+ +P  T C ECQ
Sbjct: 2  DIADKAAEIEEMNRAQA--LAARRRIPAAPGCAECEDCGDPIPEARRRAYPSATRCTECQ 59

Query: 63 AYQERQRKHY 72
          A  ER  K+ 
Sbjct: 60 ARHERHAKNR 69


>UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family protein n=1
           Tax=Psychromonas ingrahamii 37 RepID=A1SZ57_PSYIN
          Length = 115

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           + +  +++        +C  C   I   R +I P    C++C  
Sbjct: 70  VEQALKRLEKQIYG--ICVDCDEDINVHRLEIDPTAIRCIKCAQ 111


>UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepID=Q3J1J5_RHOS4
          Length = 105

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           ++E  E+   + Q  +  I     +I+A       C  CG  I EAR  + P    C +C
Sbjct: 46  TEEVLESMGTSGQQEIRAITAALARIDADEYG--FCVKCGAEIGEARLDVLPYTPFCRKC 103

Query: 62  Q 62
            
Sbjct: 104 A 104


>UniRef50_B9JTX5 DnaK suppressor protein n=1 Tax=Agrobacterium vitis S4
           RepID=B9JTX5_AGRVS
          Length = 105

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 3   DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           DE  E+     +  + GI     ++ A       C  C   I   R  + P    C +C 
Sbjct: 46  DEVLESLGQAGENELRGIEAALARMEAGSYGR--CVTCDAAIAPERLALLPATPFCQDCA 103


>UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S3A6_9GAMM
          Length = 112

 Score = 50.9 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           + +  +  +   Q  +  I     ++         C  CG+ I   R    P  T C+ C
Sbjct: 52  AQQMAQETARRRQQQLQKIKSALYRLEDGNYG--YCFTCGDAIDIGRLNFDPASTRCIGC 109


>UniRef50_A4XRJ7 Transcriptional regulator, TraR/DksA family n=8
           Tax=Pseudomonadaceae RepID=A4XRJ7_PSEMY
          Length = 103

 Score = 50.5 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            D A++A                +L +  +N+   ++      +  C  CG PI EAR  
Sbjct: 31  PDFAEQAQQRQNDEVLEALLAEAELGLALVNQALARVADGSYGL--CLKCGEPISEARLN 88

Query: 51  IFPGVTLCVECQAYQ 65
             P    C+ C + +
Sbjct: 89  AIPAAEYCLGCASVR 103


>UniRef50_Q45478 Uncharacterized protein ylyA n=7 Tax=Bacillus RepID=YLYA_BACSU
          Length = 124

 Score = 50.5 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 14 QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          +  +  +     KI         CE  G PIP A+  + P   
Sbjct: 52 KEELQDVLLALSKIENGTFG--YCEETGAPIPLAKLAVLPTAR 92


>UniRef50_D1VL44 Transcriptional regulator, TraR/DksA family n=3 Tax=Actinomycetales
           RepID=D1VL44_9ACTO
          Length = 118

 Score = 50.5 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            A        +  I+    ++ A       CE CG PI   R    P V  C+ C + 
Sbjct: 59  RATLREATTRLAEIDAALARLAAGRFGS--CETCGGPIEPGRLDARPWVRSCIGCASR 114


>UniRef50_C1RJC9 DnaK suppressor protein n=4 Tax=Micrococcineae RepID=C1RJC9_9CELL
          Length = 113

 Score = 50.5 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
           A        +  I+    ++ A       C   G P+ +AR +  P  T CV 
Sbjct: 61  ALGAAATRRLAEIDAALARVAAGTYGR--CAVGGEPLDDARLEARPTATTCVA 111


>UniRef50_A3EVE8 Putative uncharacterized protein n=1 Tax=Leptospirillum rubarum
          RepID=A3EVE8_9BACT
          Length = 52

 Score = 50.5 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 25 QKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKHY 72
           ++   G     C  CG  IP  RR++ PGV  C+ CQ  +ER    Y
Sbjct: 4  SRLQPKGDSALFCSDCGGVIPVKRRELVPGVKTCILCQKERERSSMEY 51


>UniRef50_B6EIS7 Probable rRNA transcription initiatior protein,putative phage
          gene n=1 Tax=Aliivibrio salmonicida LFI1238
          RepID=B6EIS7_ALISL
          Length = 71

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGI--PVYLCEACGNPIPEARRKIFPGVTLCVE 60
          D  D A ++  + T   +     K            C  C   IP+AR++   G   CV 
Sbjct: 2  DAFDRASALEAKQTEVALANHMAKQKNKVEIKSAEECIECEKAIPKARQEAVKGCQYCVN 61

Query: 61 CQAYQERQR 69
          CQ   ++ +
Sbjct: 62 CQELADKGK 70


>UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q8R9_SULNB
          Length = 114

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 2/55 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
                 M  +     KI+       +C+ C   IP  R K+ P    CV C    
Sbjct: 60  EEATKRMNRLKHAYLKIDTPEYG--ICKECEEDIPIERLKLVPESLYCVACMNEL 112


>UniRef50_Q2WA51 DnaK suppressor protein n=1 Tax=Magnetospirillum magneticum AMB-1
          RepID=Q2WA51_MAGSA
          Length = 74

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 26/71 (36%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          M+D AD A    E      +   R +    G   Y C +CG  IP+ RR   PG   C  
Sbjct: 1  MADLADLAKEREEANREAALAAFRARARPTGESAYFCRSCGERIPDERRAAVPGTNHCTF 60

Query: 61 CQAYQERQRKH 71
          C         H
Sbjct: 61 CAQQITAASPH 71


>UniRef50_Q8CJP0 Putative uncharacterized protein SCO6165 n=3 Tax=Streptomyces
           RepID=Q8CJP0_STRCO
          Length = 125

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            + + ++ +  +     +I         C  C   I   R  I P    C  CQ  +E  
Sbjct: 67  LAASARMVLADVEAALDRIAEGRYGN--CHLCRRAIDRERLVIVPQARYCARCQQVREAG 124

Query: 69  R 69
           R
Sbjct: 125 R 125


>UniRef50_B8J2D3 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774
           RepID=B8J2D3_DESDA
          Length = 130

 Score = 50.1 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 9/77 (11%)

Query: 2   SDEADEAYSVTEQLTMT-GINRIRQKINAHG--------IPVYLCEACGNPIPEARRKIF 52
           SDEAD A  +           R  Q+I+                C  CG  IP  R    
Sbjct: 34  SDEADAASHMEAAYIACCRARRSVQRIHDLERLLHLLRHNGPRQCVDCGEDIPLKRLVAA 93

Query: 53  PGVTLCVECQAYQERQR 69
           PG   C  CQ  +ER  
Sbjct: 94  PGTVRCFSCQQQEERAA 110


>UniRef50_A0LA91 Transcriptional regulator, TraR/DksA family n=5 Tax=Bacteria
           RepID=A0LA91_MAGSM
          Length = 119

 Score = 49.7 bits (118), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
           +  Q  +  I+    ++         C  CG  I   R +  P V  C+ C +  E +
Sbjct: 64  LRRQQELRRIDAALVRLTDGSFG--ECLVCGGQIAPQRLQWDPSVATCIGCASRAESR 119


>UniRef50_A9EK28 Putative uncharacterized protein n=2 Tax=Phaeobacter gallaeciensis
           RepID=A9EK28_9RHOB
          Length = 102

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 2   SDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
           +  ++   S         I+    +++        C+ CG+ I ++     P    C  C
Sbjct: 43  AQPSEAVLSRKWLELRRDIDCALARLDEGSYG--YCQICGDRISDSHLSTHPTTAFCASC 100

Query: 62  Q 62
            
Sbjct: 101 A 101


>UniRef50_UPI00016C3638 transcriptional regulators, TraR/DksA family protein n=1
           Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3638
          Length = 122

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E   +  ++E+  +        + +        C+ CG  +   R    P    C++C  
Sbjct: 57  EVARSVLLSEEQILGEAQAALARFDEGTFGR--CQRCGRAVARTRLATIPYARNCIKCAR 114

Query: 64  YQERQR 69
             E   
Sbjct: 115 AAEAGH 120


>UniRef50_B0ZSI9 Putative uncharacterized protein n=1 Tax=Halomonas phage phiHAP-1
          RepID=B0ZSI9_9CAUD
          Length = 75

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 1  MSDEADEAYSVTEQLTMTGINR--IRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLC 58
          MSD AD A     +L      R    Q           C  CG  I   RRK  P    C
Sbjct: 1  MSDVADIAGEEQARLEEERAARWAREQAARESQAGSEYCVECGFDIDPRRRKAMPSAIRC 60

Query: 59 VECQAYQERQRKHY 72
            CQ + +R  K Y
Sbjct: 61 FGCQEFVDRTAKGY 74


>UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellovibrio bacteriovorus
           RepID=Q6MHM2_BDEBA
          Length = 135

 Score = 49.7 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
            +     +  +  I     +I         CE     I   R +  P   L +E    +E
Sbjct: 69  LSMHERMRGQLMEIESALARIEGGTFG--YCEETEEAIEPERLRAIPWTRLSIEGAEIRE 126

Query: 67  RQRKHYA 73
              K YA
Sbjct: 127 SMNKRYA 133


>UniRef50_B7WXU2 Transcriptional regulator, TraR/DksA family n=1 Tax=Comamonas
          testosteroni KF-1 RepID=B7WXU2_COMTE
          Length = 76

 Score = 49.4 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKI----NAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D  D A +   QL    +    ++              C ACG  IPEARRK  PG  
Sbjct: 1  MTDFFDRAQARELQLREDALRDQTRRAGLSGKTEADSATEC-ACGALIPEARRKAVPGCQ 59

Query: 57 LCVECQAYQERQRKH 71
           CV+C++ QER++  
Sbjct: 60 RCVKCESAQERKKGR 74


>UniRef50_Q6U9H2 Putative uncharacterized protein n=2 Tax=unclassified T4-like
          viruses RepID=Q6U9H2_9CAUD
          Length = 84

 Score = 49.4 bits (117), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 18 TGINRIRQKINAHGI---PVYLCEACGNPIPEARRKIFPGVTLCVECQAYQE 66
           G++     I +          CE C  PIPEARR        CV+CQ   +
Sbjct: 17 AGLDNALDFIRSTQYKGDTPEFCEECDEPIPEARRMAISTA-YCVQCQTVHD 67


>UniRef50_B9JYG7 DnaK suppressor protein n=2 Tax=Agrobacterium vitis S4
          RepID=B9JYG7_AGRVS
          Length = 72

 Score = 49.4 bits (117), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 5  ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           + A    EQ     +   R  +         C  CG  IP+ARR  +P    C +CQ  
Sbjct: 7  FELAEERIEQERDAKVAAARADLKKA--GATECLDCGRAIPQARRFAYPSAIRCFDCQVS 64

Query: 65 QERQ 68
           ER+
Sbjct: 65 IERE 68


>UniRef50_A2SLK3 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum
           PM1 RepID=A2SLK3_METPP
          Length = 131

 Score = 48.6 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            A+ A    + + +  +     +          C  CG PI  AR    P  + C +C
Sbjct: 60  IAESAAPRPDAVVLGEVRAALARFETGRYG--HCVECGAPIEPARLIERPQASRCDDC 115


>UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 Tax=Silicibacter
           lacuscaerulensis ITI-1157 RepID=D0CY54_9RHOB
          Length = 112

 Score = 48.6 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           A      L    +N    +I+        CE CG+ I   R ++ P    CV C +
Sbjct: 58  AQQTRRDLEARRLNAALTRISKGEFG--YCEDCGDAIARGRLELDPAAGKCVSCAS 111


>UniRef50_Q1IQ14 Serine phosphatase n=1 Tax=Candidatus Koribacter versatilis
          Ellin345 RepID=Q1IQ14_ACIBL
          Length = 341

 Score = 48.6 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 7/58 (12%)

Query: 15 LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC-----QAYQER 67
            +  +++   K+      V  C+ C   I   R    P VT C+ C     Q   E+
Sbjct: 37 HLLHDVDQALAKLETGNFGV--CQNCHESIEVDRVMADPLVTFCLGCLTPAQQRSLEQ 92


>UniRef50_A6Q6G5 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
           RepID=A6Q6G5_SULNB
          Length = 115

 Score = 47.8 bits (113), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
              ++ +T +     +I+       +C  C   I   R  + P    CVEC 
Sbjct: 60  DESKVRLTRLQNALLRIDKPMFG--ICIECEEEIGTGRMSVRPESVRCVECA 109


>UniRef50_Q1MZF4 DnaK suppressor protein n=1 Tax=Bermanella marisrubri
           RepID=Q1MZF4_9GAMM
          Length = 110

 Score = 47.8 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           E  EA +   Q  +  I     ++        +CE C   I   R    P   LC  C  
Sbjct: 51  EVAEAIAQETQQELQQIKHAILRLKQGQY--QVCELCQQSIEPERLLALPYTALCASCAN 108

Query: 64  YQ 65
            Q
Sbjct: 109 EQ 110


>UniRef50_C6NRK8 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus
          ATCC 51756 RepID=C6NRK8_9GAMM
          Length = 72

 Score = 47.8 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%)

Query: 7  EAYSVTEQLTMTGINRIR----QKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           A  + ++     + R+R    ++ +        C  CG P P  R         CV C 
Sbjct: 1  MAAELEQRYRELALARLRALPSEEPDEDANGNRFCLDCGEPTPADRVAAV-HAVRCVTCA 59

Query: 63 AYQERQRKHYA 73
            +ER  +  A
Sbjct: 60 TRRERLARQRA 70


>UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12
          RepID=A8LJD1_DINSH
          Length = 92

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 13 EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          E   +  +    ++I      +  C ACG  I   R    P   LC  C+
Sbjct: 42 ELRQLRRLELALKRIETGAYGL--CMACGGEISPGRLHACPATALCASCK 89


>UniRef50_UPI0001AEEFB7 hypothetical protein SghaA1_04058 n=2 Tax=Streptomyces
           RepID=UPI0001AEEFB7
          Length = 131

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 5/67 (7%)

Query: 6   DEAYSVTEQLT---MTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           D     T +L    +  +     +++       +C  C  P+   R  I P    C  CQ
Sbjct: 67  DRGARQTRRLRPMGLADVEAALTRMDTGTYG--ICHLCRRPVQRDRLLIVPQARYCARCQ 124

Query: 63  AYQERQR 69
             +E  R
Sbjct: 125 QVREAAR 131


>UniRef50_Q0ALK2 Transcriptional regulators, TraR/DksA family n=1 Tax=Maricaulis
           maris MCS10 RepID=Q0ALK2_MARMM
          Length = 107

 Score = 47.4 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           E  +A +    + +  I     +++        C  CG  I  AR  + P V  C  C 
Sbjct: 51  EMAKAANARRTVEVRRIEAALARVDEDDYG--WCVECGEVIEPARLALDPAVPRCAGCA 107


>UniRef50_C9YVQ6 Putative uncharacterized protein n=2 Tax=Streptomyces
           RepID=C9YVQ6_STRSW
          Length = 126

 Score = 47.0 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
            + + ++ +  +    ++++        C  C  PI      I P    C  C+  +E  
Sbjct: 68  LAASARMVLADVEAALERMDQGRYG--HCHLCHGPIDRDLLTIVPQARYCARCRHLREAG 125

Query: 69  R 69
           R
Sbjct: 126 R 126


>UniRef50_Q2IF94 Transcriptional regulator, TraR/DksA family n=4
           Tax=Anaeromyxobacter RepID=Q2IF94_ANADE
          Length = 115

 Score = 46.7 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
           +  E+  +  I+R   K++A    V   E  G PI   R    P   
Sbjct: 64  AERERALLADIDRALAKLDAGTYGVS--ERTGEPIAYERLAAVPWTR 108


>UniRef50_Q1GXR9 Transcriptional regulators, TraR/DksA family n=1
          Tax=Methylobacillus flagellatus KT RepID=Q1GXR9_METFK
          Length = 72

 Score = 46.7 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 6  DEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          D A  +  +    GI   + +    G     C+ CG  I + RR    GV  C+ CQ   
Sbjct: 5  DWAQEMELREREAGIAEKQLQALRSGPGYSHCKDCGEEIEKERR-AIKGVKRCIFCQERY 63

Query: 66 ER 67
          ER
Sbjct: 64 ER 65


>UniRef50_A6W860 Transcriptional regulator, TraR/DksA family n=1 Tax=Kineococcus
           radiotolerans SRS30216 RepID=A6W860_KINRD
          Length = 111

 Score = 46.7 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 2/47 (4%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGV 55
                +  +  +    ++I A    +      G PIP  R + +P  
Sbjct: 59  LLEGARRRLDSVADALKRIEAGTYGLS--VVSGEPIPAERLEAYPDA 103


>UniRef50_A4C5Q6 Putative DksA-type zinc finger protein n=1 Tax=Pseudoalteromonas
           tunicata D2 RepID=A4C5Q6_9GAMM
          Length = 117

 Score = 46.7 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 13/53 (24%), Gaps = 2/53 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
                +  I     + +        C  C   I  AR +  P    C  C   
Sbjct: 67  ELIAKLNRIEAALCQFDIGQFG--YCADCEEIIELARLENDPTEQRCASCAKK 117


>UniRef50_A7Z4G4 YlyA n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z4G4_BACA2
          Length = 123

 Score = 46.3 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 1  MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          M+D+ +       +  +  +     K   +      CE  G+PIP  +  + P   
Sbjct: 39 MNDQ-EATLIYHIKEELQDVLLALSKFENNMYG--YCEKTGDPIPIEKLAVLPTAR 91


>UniRef50_Q0HYS5 Transcriptional regulators, TraR/DksA family n=3 Tax=Shewanella
          RepID=Q0HYS5_SHESR
          Length = 68

 Score = 46.3 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D         E            K          C  CG+ IPE RR+   GV LCV CQ
Sbjct: 5  DLVTREQLRAEHRFEQQRKAQAAKPVP--PSATDCAECGDEIPEGRRQAILGVRLCVTCQ 62

Query: 63 AYQERQ 68
           ++E Q
Sbjct: 63 TWRESQ 68


>UniRef50_A8LRU0 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae
           RepID=A8LRU0_DINSH
          Length = 117

 Score = 45.9 bits (108), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           A  V  +     I     ++         C  CG  I   R  + P    C +C+
Sbjct: 64  ALEVRRRGRRARIVAALHRMETGEFG--YCVDCGGFIGLPRLDVDPTTAECRDCK 116


>UniRef50_Q080Q5 Transcriptional regulators, TraR/DksA family protein n=1
           Tax=Shewanella frigidimarina NCIMB 400
           RepID=Q080Q5_SHEFN
          Length = 123

 Score = 45.1 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 2/53 (3%)

Query: 19  GINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            ++    ++      +  C  C   I   R    P    C  C+    R+ +H
Sbjct: 67  KLDAAYCQLELGLYGL--CSDCEMDIEPPRLFADPTEQRCTGCEQKFRREHRH 117


>UniRef50_Q2SPX6 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396
          RepID=Q2SPX6_HAHCH
          Length = 78

 Score = 44.7 bits (105), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 3  DEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
          D  D+A  + E+L  + + R R            C  C + IP  R++   GV+ CVEC+
Sbjct: 4  DILDQAAELQERLNASALARQRAGSALGQPSRAHCIDCEDAIPPLRQQ-LGGVSRCVECE 62

Query: 63 AYQERQRKH 71
           Y +  ++ 
Sbjct: 63 DYYQHAQRQ 71


>UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae CT 5369-93
          RepID=D0HX41_VIBCH
          Length = 79

 Score = 44.7 bits (105), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 2/40 (5%)

Query: 16 TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGV 55
           +  I +   KI         CE+CG  I   R +  P  
Sbjct: 1  MIKKIEKTLDKIKEEDFG--YCESCGVEIGIRRLEAPPTA 38


>UniRef50_A1SW83 DnaK suppressor n=1 Tax=Psychromonas ingrahamii 37
           RepID=A1SW83_PSYIN
          Length = 129

 Score = 44.7 bits (105), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 19/65 (29%), Gaps = 2/65 (3%)

Query: 5   ADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
            D +    +   +  I+     I         C  C   I   + +       C  C+  
Sbjct: 61  LDVSSLAHKTNEIKSIDASLNDIELGLYG--FCSDCEAEISIDKLQENVTTKRCDICEKK 118

Query: 65  QERQR 69
            ++Q+
Sbjct: 119 YQKQK 123


>UniRef50_Q1GF41 Transcriptional regulators TraR/DksA family n=2 Tax=Ruegeria
           RepID=Q1GF41_SILST
          Length = 102

 Score = 44.4 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 12/47 (25%), Gaps = 2/47 (4%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
             +  I     ++ A       C  CG  I        P    C  C
Sbjct: 56  REVKAILTALDRMEAGEYG--YCRICGADISSEHLSAHPESPFCEFC 100


>UniRef50_UPI00016C3E17 hypothetical protein GobsU_32959 n=1 Tax=Gemmata obscuriglobus
          UQM 2246 RepID=UPI00016C3E17
          Length = 76

 Score = 44.4 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 37 CEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          C  CGN IP  R +  P   +CV C    
Sbjct: 7  CARCGNEIPAERLQALPETQVCVACSRAM 35


>UniRef50_A9DDI2 DnaK suppressor protein, putative n=2 Tax=Rhizobiales
           RepID=A9DDI2_9RHIZ
          Length = 110

 Score = 44.0 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
               +  +  I    +++         C  CG PI   R +I P    CV C +
Sbjct: 59  ERARKRDLVRIEMAERRLADGEYG--FCAECGEPIAGKRLEIDPMAEKCVRCAS 110


>UniRef50_D2B0C4 Transcriptional regulator, TraR/DksA family n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=D2B0C4_STRRD
          Length = 120

 Score = 44.0 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 2/51 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
              +  +  I    ++++        C  CG  I   R +  P    C  C
Sbjct: 66  ERARKAVAEIEAAIERLDFGLYGT--CRRCGAFIALDRLRRAPHARYCAVC 114


>UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 Tax=Comamonadaceae
           RepID=A1WBE4_ACISJ
          Length = 150

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 29  AHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
                   C  CG P+  AR    P    C+ CQ+  E + + 
Sbjct: 110 DGSYG--ECTDCGQPVGVARLLAQPAAARCIACQSKAEARGER 150


>UniRef50_A3YDJ1 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3YDJ1_9GAMM
          Length = 113

 Score = 43.6 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 10  SVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
              E L +  +     ++      +  C+ C  PI E R  I P +  C +C
Sbjct: 62  RKAENLALEAVQYAISRLQESDYGL--CKTCSKPIEEKRLTILPDIKHCFDC 111


>UniRef50_Q12LK7 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans
           OS217 RepID=Q12LK7_SHEDO
          Length = 141

 Score = 43.2 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 2/57 (3%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
             +  ++    ++      +  C  C   I  AR    P    C  C     RQ + 
Sbjct: 81  QRLMQLDAAYCQLELGLYGL--CADCETQIEAARLSQDPTAQRCNHCDNKYHRQHRQ 135


>UniRef50_UPI0000D553E9 prokaryotic dksA/traR C4-type zinc finger family protein n=1
           Tax=Psychroflexus torquis ATCC 700755
           RepID=UPI0000D553E9
          Length = 109

 Score = 43.2 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 16/56 (28%), Gaps = 2/56 (3%)

Query: 9   YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
                      +     +I         C  C   I EAR  + P  +LCV C   
Sbjct: 55  LLRNAAEKQKKLKLALHRIGEPKFG--FCSLCEQAIQEARLLLMPESSLCVGCARR 108


>UniRef50_Q2N719 DnaK suppressor protein, putative n=9 Tax=Alphaproteobacteria
           RepID=Q2N719_ERYLH
          Length = 111

 Score = 42.8 bits (100), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 20  INRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
           I     +++        C  CG  I   R    P V  C+ C +
Sbjct: 67  IVAALTRLDEGEWG--YCIRCGEEIAAKRLAHDPSVPRCMGCAS 108


>UniRef50_B6BP36 Transcriptional regulator, TraR/DksA family n=1
           Tax=Campylobacterales bacterium GD 1 RepID=B6BP36_9PROT
          Length = 114

 Score = 42.4 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 11  VTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
              Q+ +  +    QKI   G    +C  C   I   R  + P  T CV C
Sbjct: 60  HEAQIRVNKLKYAIQKIGKDGYG--ICAECEEEIIFGRLMLLPESTHCVAC 108


>UniRef50_Q0HHY4 Transcriptional regulators, TraR/DksA family n=11 Tax=Shewanella
           RepID=Q0HHY4_SHESM
          Length = 119

 Score = 42.4 bits (99), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 2/56 (3%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            +  ++    +++     +  C  C   I   R    P    C  C  + + + +H
Sbjct: 60  RLNRLDAASCQLDLGLYGL--CSDCETEIEAERLNQDPTEQRCSSCAEHYQHEHRH 113


>UniRef50_B8CMX6 DksA-type zinc finger protein n=8 Tax=Shewanella RepID=B8CMX6_SHEPW
          Length = 127

 Score = 42.0 bits (98), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            +  ++  R ++      V  C  C   I        P    C+ C    +R+ + 
Sbjct: 68  KLMQLDAARCQLEIGLYGV--CSDCEENIEAELLAADPLEQRCLSCNNLHKREHRQ 121


>UniRef50_Q88BV3 DnaK suppressor domain protein n=1 Tax=Pseudomonas syringae pv.
          tomato RepID=Q88BV3_PSESM
          Length = 66

 Score = 41.7 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 9  YSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQ 68
             + +  ++ + ++ + +         C+  G  I   R  + P     VE     E +
Sbjct: 1  MIESGRQALSHVLKVLEILALGDYG--FCQETGEAIGLKRLLLVPESLYSVESMRVLEAK 58

Query: 69 RKH 71
            H
Sbjct: 59 GMH 61


>UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FAI8_DESAA
          Length = 112

 Score = 41.7 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 2/54 (3%)

Query: 12  TEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
             +  M G+ R    I         C  C   IP  R  + P   +CV+C    
Sbjct: 61  NAKARMNGLLRALDNIGDPDFG--YCAICDEEIPIGRIMLVPESDVCVKCAQKA 112


>UniRef50_B9MIL7 Transcriptional regulator, TraR/DksA family n=3 Tax=Burkholderiales
           RepID=B9MIL7_DIAST
          Length = 111

 Score = 41.3 bits (96), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 7   EAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQ 65
           +       +    +     ++++    +  C AC + +        P V  C EC   +
Sbjct: 54  QGLRERLTIRKRKVEAALARLDSGTYGL--CCACHSDLEPELLNADPAVVFCQECATAR 110


>UniRef50_C7MER6 DnaK suppressor protein n=1 Tax=Brachybacterium faecium DSM 4810
           RepID=C7MER6_BRAFD
          Length = 114

 Score = 41.3 bits (96), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 21  NRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQ 62
           +    ++      +  C  CG PI  AR  + P  T C++C 
Sbjct: 74  DEASSRLARGEDGL--CRRCGRPIAPARLAVRPEATTCIDCA 113


>UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseudomonas syringae
           group RepID=Q48NH0_PSE14
          Length = 138

 Score = 40.9 bits (95), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 13/81 (16%)

Query: 2   SDEADEAYSVT-----------EQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRK 50
            DEAD A               ++ T++ + +  + +       +  +  G  I   R  
Sbjct: 54  PDEADFASDEENRAVAASMIERDRQTLSHVLKALEILALGDYGFF--QETGEAIGIKRLL 111

Query: 51  IFPGVTLCVECQAYQERQRKH 71
           + P     VE     E +  H
Sbjct: 112 LVPESLYSVESMRALEAKGMH 132


>UniRef50_B4D7F0 Transcriptional regulator, TraR/DksA family n=1
          Tax=Chthoniobacter flavus Ellin428 RepID=B4D7F0_9BACT
          Length = 72

 Score = 40.9 bits (95), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 37 CEACGNPIPEARRKIFPGVTLCVECQAYQ 65
          C  CG  IP+ R  + P   +CV C    
Sbjct: 8  CRICGAEIPKERLDVIPDTEVCVRCSKKI 36


>UniRef50_A1SEE1 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614
           RepID=A1SEE1_NOCSJ
          Length = 123

 Score = 40.5 bits (94), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 2/57 (3%)

Query: 8   AYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAY 64
           A+  + Q  +  I   + ++         C  CG     AR    P   LC  C A 
Sbjct: 69  AHRESVQRILQDIRAAQAELADGSYGS--CRRCGARTDLARALSRPWAPLCGSCSAR 123


>UniRef50_A6WN37 Zinc finger-related protein n=4 Tax=Shewanella RepID=A6WN37_SHEB8
          Length = 74

 Score = 40.5 bits (94), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 3  DEADEAYSVTEQLTMTGINRIR--QKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE 60
          DE D A ++  +     ++ +R   +   H     +C  C  P    R         C+ 
Sbjct: 2  DETDWASNMETRERAACVDAVRDAARHKQHSTGNGICIDCLEPNEPQRLNEL----RCIS 57

Query: 61 CQAYQERQRKHY 72
          CQ  +++++K  
Sbjct: 58 CQEDEDKRQKMR 69


>UniRef50_C1AE46 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1AE46_GEMAT
          Length = 118

 Score = 40.1 bits (93), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 2   SDEADEAYSVTEQ-LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCV 59
           ++E  +A   T +   +  I+    ++        L E  G  IP AR +I P     V
Sbjct: 60  ANEELQASIATRRSAELVEIDFAIDRLTNSPDTFGLDENTGEEIPFARLEIIPWARTTV 118


>UniRef50_A6Q3X7 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2
           RepID=A6Q3X7_NITSB
          Length = 104

 Score = 39.7 bits (92), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 3/50 (6%)

Query: 4   EADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFP 53
           + D+A           I R  +KI         C   G+ IP  + +  P
Sbjct: 54  DTDKALLQKLNEEKKQILRALRKIKNGTYG--QCSD-GSAIPLEKLEADP 100


>UniRef50_Q6LTF1 Hypothetical dksA-type zinc finger protein n=5 Tax=Photobacterium
           RepID=Q6LTF1_PHOPR
          Length = 120

 Score = 39.7 bits (92), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 14/46 (30%), Gaps = 2/46 (4%)

Query: 16  TMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVEC 61
            M  ++     I      +  C  C   I E+  K  P    C  C
Sbjct: 68  RMEKVDAAVCSIKLGMYGL--CVDCEEEIDESELKADPAQPRCHAC 111


>UniRef50_Q3IKM8 Putative DksA-type zinc finger protein n=2 Tax=Alteromonadales
           RepID=Q3IKM8_PSEHT
          Length = 108

 Score = 39.3 bits (91), Expect = 0.039,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 2/49 (4%)

Query: 15  LTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQA 63
             MT +     +I         C  C   I  A  ++ P    C +C  
Sbjct: 62  QRMTTLEAAVSQIEIGQYG--YCCDCEESITTALLELDPATQRCEQCAK 108


>UniRef50_A7GRL9 Transcriptional regulator, TraR/DksA family n=78 Tax=Bacillus
          RepID=A7GRL9_BACCN
          Length = 109

 Score = 39.3 bits (91), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 14 QLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVT 56
          +  +  + R   K+      V  CE  G  I   R K+ P   
Sbjct: 57 REDLKDVERALFKMEIDMYGV--CEETGEMISLKRMKMLPTAR 97


>UniRef50_A4A0C8 Putative uncharacterized protein n=1 Tax=Blastopirellula marina
          DSM 3645 RepID=A4A0C8_9PLAN
          Length = 129

 Score = 38.6 bits (89), Expect = 0.062,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 34 VYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRKH 71
            +C+ C  PIP  R ++FP    CV C+   +    H
Sbjct: 58 RRVCQVCRQPIPLERLEVFPDADTCVGCREKLDNADDH 95


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.315    0.167    0.638 

Lambda     K      H
   0.267   0.0514    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 757,496,213
Number of Sequences: 3077464
Number of extensions: 35506624
Number of successful extensions: 125284
Number of sequences better than 1.0e-01: 454
Number of HSP's better than  0.1 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 123014
Number of HSP's gapped (non-prelim): 1412
length of query: 73
length of database: 1,040,396,356
effective HSP length: 44
effective length of query: 29
effective length of database: 904,987,940
effective search space: 26244650260
effective search space used: 26244650260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 88 (38.2 bits)
