Phyre 2 Results for P14375

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Email | l.a.kelley@imperial.ac.uk
Description | P14375
Date | Thu Jan 5 11:33:59 GMT 2012
Unique Job ID | f96fd4137ff0b0e9

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c1ny5A_
Top template information
PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
Confidence and coverage
Confidence: | 100.0% | Coverage: | 86%
381 residues ( 86% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
436 residues ( 99%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | T | H | D | N | I | D | I | L | V | V | D | D | D | I | S | H | C | T | I | L | Q | A | L | L | R | G | W | G | Y | N | V | A | L | A | N | S | G | R | Q | A | L | E | Q | V | R | E | Q | V | F | D | L | V | L | C | D | V | R | M | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | E | M | D | G | I | A | T | L | K | E | I | K | A | L | N | P | A | I | P | V | L | I | M | T | A | Y | S | S | V | E | T | A | V | E | A | L | K | T | G | A | L | D | Y | L | I | K | P | L | D | F | D | N | L | Q | A | T | L | E | K | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | L | A | H | T | H | S | I | D | A | E | T | P | A | V | T | A | S | Q | F | G | M | V | G | K | S | P | A | M | Q | H | L | L | S | E | I | A | L | V | A | P | S | E | A | T | V | L | I | H | G | D | S | G | T | G | K | E | L | V | A | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | A | I | H | A | S | S | A | R | S | E | K | P | L | V | T | L | N | C | A | A | L | N | E | S | L | L | E | S | E | L | F | G | H | E | K | G | A | F | T | G | A | D | K | R | R | E | G | R | F | V | E | A | D | G | G | T | L | F | L | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  | ? |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | E | I | G | D | I | S | P | M | M | Q | V | R | L | L | R | A | I | Q | E | R | E | V | Q | R | V | G | S | N | Q | I | I | S | V | D | V | R | L | I | A | A | T | H | R | D | L | A | A | E | V | N | A | G | R | F | R | Q | D | L | Y | Y
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | R | L | N | V | V | A | I | E | V | P | S | L | R | Q | R | R | E | D | I | P | L | L | A | G | H | F | L | Q | R | F | A | E | R | N | R | K | A | V | K | G | F | T | P | Q | A | M | D | L | L | I | H | Y | D | W | P | G | N | I | R | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | L | E | N | A | V | E | R | A | V | V | L | L | T | G | E | Y | I | S | E | R | E | L | P | L | A | I | A | S | T | P | I | P | L | G | Q | S | Q | D | I | Q | P | L | V | E | V | E | K | E | V | I | L | A | A | L | E | K | T | G | G | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | .
Sequence |  | K | T | E | A | A | R | Q | L | G | I | T | R | K | T | L | L | A | K | L | S | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c1ny5A_ |

### PDB 1ny5 chain A

Region: 6 - 386
Aligned: 381
Modelled: 381
Confidence: 100.0%
Identity: 43%
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state

Phyre2
2 |
| c3dzdA_ |

### PDB 3dzd chain A

Region: 7 - 379
Aligned: 367
Modelled: 373
Confidence: 100.0%
Identity: 42%
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state

Phyre2
3 |
| c2c99A_ |

### PDB 2c99 chain A

Region: 141 - 385
Aligned: 238
Modelled: 245
Confidence: 100.0%
Identity: 45%
PDB header:transcription regulation
Chain: A: PDB Molecule:psp operon transcriptional activator;
PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf

Phyre2
4 |
| d1ny5a2 |

### PDB 1ny5 chain A domain 2

Region: 140 - 386
Aligned: 247
Modelled: 247
Confidence: 100.0%
Identity: 50%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Extended AAA-ATPase domain

Phyre2
5 |
| c1ojlF_ |

### PDB 1ojl chain F

Region: 140 - 389
Aligned: 247
Modelled: 250
Confidence: 100.0%
Identity: 92%
PDB header:response regulator
Chain: F: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding

Phyre2
6 |
| c3co5B_ |

### PDB 3co5 chain B

Region: 144 - 312
Aligned: 132
Modelled: 146
Confidence: 99.9%
Identity: 25%
PDB header:transcription regulator
Chain: B: PDB Molecule:putative two-component system transcriptional response
PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae

Phyre2
7 |
| c2ayxA_ |

### PDB 2ayx chain A

Region: 1 - 129
Aligned: 129
Modelled: 129
Confidence: 99.9%
Identity: 31%
PDB header:transferase
Chain: A: PDB Molecule:sensor kinase protein rcsc;
PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain

Phyre2
8 |
| c1w25B_ |

### PDB 1w25 chain B

Region: 5 - 149
Aligned: 145
Modelled: 145
Confidence: 99.9%
Identity: 30%
PDB header:signaling protein
Chain: B: PDB Molecule:stalked-cell differentiation controlling protein;
PDBTitle: response regulator pled in complex with c-digmp

Phyre2
9 |
| c3eq2A_ |

### PDB 3eq2 chain A

Region: 7 - 133
Aligned: 124
Modelled: 127
Confidence: 99.9%
Identity: 31%
PDB header:signaling protein
Chain: A: PDB Molecule:probable two-component response regulator;
PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb

Phyre2
10 |
| d2ayxa1 |

### PDB 2ayx chain A domain 1

Region: 1 - 129
Aligned: 129
Modelled: 129
Confidence: 99.9%
Identity: 31%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
11 |
| d1ny5a1 |

### PDB 1ny5 chain A domain 1

Region: 6 - 131
Aligned: 126
Modelled: 126
Confidence: 99.9%
Identity: 32%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
12 |
| c2rjnA_ |

### PDB 2rjn chain A

Region: 4 - 135
Aligned: 132
Modelled: 132
Confidence: 99.9%
Identity: 24%
PDB header:hydrolase
Chain: A: PDB Molecule:response regulator receiver:metal-dependent
PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis

Phyre2
13 |
| c3breA_ |

### PDB 3bre chain A

Region: 5 - 130
Aligned: 126
Modelled: 126
Confidence: 99.9%
Identity: 21%
PDB header:signaling protein
Chain: A: PDB Molecule:probable two-component response regulator;
PDBTitle: crystal structure of p.aeruginosa pa3702

Phyre2
14 |
| d1ys7a2 |

### PDB 1ys7 chain A domain 2

Region: 7 - 124
Aligned: 118
Modelled: 118
Confidence: 99.9%
Identity: 35%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
15 |
| d1dbwa_ |

### PDB 1dbw chain A

Region: 1 - 123
Aligned: 121
Modelled: 123
Confidence: 99.9%
Identity: 29%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
16 |
| d1jbea_ |

### PDB 1jbe chain A

Region: 2 - 125
Aligned: 124
Modelled: 124
Confidence: 99.9%
Identity: 33%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
17 |
| d1kgsa2 |

### PDB 1kgs chain A domain 2

Region: 5 - 125
Aligned: 121
Modelled: 121
Confidence: 99.9%
Identity: 30%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
18 |
| d1mvoa_ |

### PDB 1mvo chain A

Region: 1 - 124
Aligned: 121
Modelled: 124
Confidence: 99.9%
Identity: 34%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
19 |
| d1qkka_ |

### PDB 1qkk chain A

Region: 7 - 132
Aligned: 126
Modelled: 126
Confidence: 99.9%
Identity: 28%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
20 |
| d1peya_ |

### PDB 1pey chain A

Region: 5 - 122
Aligned: 118
Modelled: 118
Confidence: 99.9%
Identity: 37%
Fold: Flavodoxin-like
Superfamily: CheY-like
Family: CheY-related

Phyre2
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56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
| c3pfiB_ |

### PDB 3pfi chain B

Region: 137 - 441
Aligned: 251
Modelled: 245
Confidence: 99.8%
Identity: 21%
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate

Phyre2
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
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137 |
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140 |
141 |
142 |
143 |
144 |
145 |
146 |
147 |
148 |
149 |
150 |
151 |
| d1ntca_ |

### PDB 1ntc chain A

Region: 353 - 441
Aligned: 86
Modelled: 86
Confidence: 99.3%
Identity: 27%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Family: FIS-like

Phyre2
152 |
153 |
154 |
155 |
156 |
157 |
158 |
159 |
160 |
161 |
162 |
163 |
164 |
165 |
166 |
167 |
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174 |
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176 |
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494 |
495 |
496 |
497 |
498 |
499 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1ny5A_ |
|  | 100.0 | 43 | PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
2 | c3dzdA_ |
|  | 100.0 | 42 | PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
3 | c2c99A_ |
|  | 100.0 | 45 | PDB header:transcription regulation Chain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
4 | d1ny5a2 |
|  | 100.0 | 50 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain
5 | c1ojlF_ |
|  | 100.0 | 92 | PDB header:response regulator Chain: F: PDB Molecule:transcriptional regulatory protein zrar; PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding
6 | c3co5B_ |
|  | 99.9 | 25 | PDB header:transcription regulator Chain: B: PDB Molecule:putative two-component system transcriptional response PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae
7 | c2ayxA_ |
|  | 99.9 | 31 | PDB header:transferase Chain: A: PDB Molecule:sensor kinase protein rcsc; PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain
8 | c1w25B_ |
|  | 99.9 | 30 | PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp
9 | c3eq2A_ |
|  | 99.9 | 31 | PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb
10 | d2ayxa1 |
|  | 99.9 | 31 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
11 | d1ny5a1 |
|  | 99.9 | 32 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
12 | c2rjnA_ |
|  | 99.9 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:response regulator receiver:metal-dependent PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis
13 | c3breA_ |
|  | 99.9 | 21 | PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: crystal structure of p.aeruginosa pa3702
14 | d1ys7a2 |
|  | 99.9 | 35 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
15 | d1dbwa_ |
|  | 99.9 | 29 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
16 | d1jbea_ |
|  | 99.9 | 33 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
17 | d1kgsa2 |
|  | 99.9 | 30 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
18 | d1mvoa_ |
|  | 99.9 | 34 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
19 | d1qkka_ |
|  | 99.9 | 28 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
20 | d1peya_ |
|  | 99.9 | 37 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
21 | d2a9pa1 |
| not modelled | 99.9 | 34 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
22 | c3cfyA_ |
| not modelled | 99.9 | 26 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative luxo repressor protein; PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus
23 | c3i5aA_ |
| not modelled | 99.9 | 23 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae
24 | c2zwmA_ |
| not modelled | 99.9 | 34 | PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis
25 | d1w25a1 |
| not modelled | 99.9 | 31 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
26 | c3r0jA_ |
| not modelled | 99.9 | 31 | PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis
27 | d2pl1a1 |
| not modelled | 99.9 | 25 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
28 | d1yioa2 |
| not modelled | 99.9 | 29 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
29 | c2qr3A_ |
| not modelled | 99.9 | 32 | PDB header:transcription Chain: A: PDB Molecule:two-component system response regulator; PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis
30 | d1krwa_ |
| not modelled | 99.9 | 40 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
31 | c3cu5B_ |
| not modelled | 99.9 | 29 | PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg
32 | c3hv2B_ |
| not modelled | 99.9 | 30 | PDB header:signaling protein Chain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5
33 | c2jrlA_ |
| not modelled | 99.9 | 34 | PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer
34 | c3gt7A_ |
| not modelled | 99.9 | 30 | PDB header:hydrolase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of signal receiver domain of signal2 transduction histidine kinase from syntrophus3 aciditrophicus
35 | c3jteA_ |
| not modelled | 99.9 | 30 | PDB header:protein binding Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver domain2 protein from clostridium thermocellum
36 | c3nhzA_ |
| not modelled | 99.9 | 38 | PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra
37 | c3eulB_ |
| not modelled | 99.9 | 23 | PDB header:transcription Chain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis
38 | c1a2oB_ |
| not modelled | 99.9 | 24 | PDB header:bacterial chemotaxis Chain: B: PDB Molecule:cheb methylesterase; PDBTitle: structural basis for methylesterase cheb regulation by a2 phosphorylation-activated domain
39 | d1zesa1 |
| not modelled | 99.8 | 31 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
40 | c3hdgE_ |
| not modelled | 99.8 | 23 | PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the n-terminal domain of an2 uncharacterized protein (ws1339) from wolinella3 succinogenes
41 | c2qzjC_ |
| not modelled | 99.8 | 27 | PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile
42 | c3t6kB_ |
| not modelled | 99.8 | 33 | PDB header:signaling protein Chain: B: PDB Molecule:response regulator receiver; PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution
43 | d1a04a2 |
| not modelled | 99.8 | 27 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
44 | d1u0sy_ |
| not modelled | 99.8 | 33 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
45 | d1p6qa_ |
| not modelled | 99.8 | 25 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
46 | d1s8na_ |
| not modelled | 99.8 | 30 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
47 | d1zh2a1 |
| not modelled | 99.8 | 31 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
48 | d1heya_ |
| not modelled | 99.8 | 31 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
49 | d1zgza1 |
| not modelled | 99.8 | 24 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
50 | c3crnA_ |
| not modelled | 99.8 | 26 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver domain protein, chey-like; PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1
51 | c3rqiA_ |
| not modelled | 99.8 | 27 | PDB header:transcription Chain: A: PDB Molecule:response regulator protein; PDBTitle: crystal structure of a response regulator protein from burkholderia2 pseudomallei with a phosphorylated aspartic acid, calcium ion and3 citrate
52 | c3kcnA_ |
| not modelled | 99.8 | 23 | PDB header:lyase Chain: A: PDB Molecule:adenylate cyclase homolog; PDBTitle: the crystal structure of adenylate cyclase from2 rhodopirellula baltica
53 | c3b2nA_ |
| not modelled | 99.8 | 21 | PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus
54 | c3cz5B_ |
| not modelled | 99.8 | 26 | PDB header:transcription regulator Chain: B: PDB Molecule:two-component response regulator, luxr family; PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1
55 | c2zayA_ |
| not modelled | 99.8 | 18 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans
56 | d1dz3a_ |
| not modelled | 99.8 | 26 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
57 | d1xhfa1 |
| not modelled | 99.8 | 22 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
58 | c1ys7B_ |
| not modelled | 99.8 | 33 | PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+
59 | c3lteH_ |
| not modelled | 99.8 | 23 | PDB header:transcription Chain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri
60 | c3c3mA_ |
| not modelled | 99.8 | 33 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1
61 | c3hdvB_ |
| not modelled | 99.8 | 25 | PDB header:transcription regulator Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator receiver protein from2 pseudomonas putida
62 | c3cnbC_ |
| not modelled | 99.8 | 24 | PDB header:dna binding protein Chain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h
63 | d1k66a_ |
| not modelled | 99.8 | 28 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
64 | c2gwrA_ |
| not modelled | 99.8 | 34 | PDB header:signaling protein Chain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis
65 | c1kgsA_ |
| not modelled | 99.8 | 26 | PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima
66 | c3h1gA_ |
| not modelled | 99.8 | 30 | PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori
67 | c2jk1A_ |
| not modelled | 99.8 | 22 | PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain
68 | c3cg4A_ |
| not modelled | 99.8 | 23 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey-like); PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1
69 | c2qv0A_ |
| not modelled | 99.8 | 22 | PDB header:transcription Chain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae
70 | d2r25b1 |
| not modelled | 99.8 | 28 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
71 | c2qxyB_ |
| not modelled | 99.8 | 26 | PDB header:transcription Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from thermotoga2 maritima
72 | c3a0rB_ |
| not modelled | 99.8 | 29 | PDB header:transferase Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360)
73 | c3pfiB_ |
|  | 99.8 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
74 | d1p2fa2 |
| not modelled | 99.8 | 28 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
75 | c3cg0A_ |
| not modelled | 99.8 | 26 | PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
76 | d1r6bx3 |
| not modelled | 99.8 | 19 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain
77 | c3khtA_ |
| not modelled | 99.8 | 20 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis
78 | c2rdmB_ |
| not modelled | 99.8 | 22 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein from2 sinorhizobium medicae wsm419
79 | c1zn2A_ |
| not modelled | 99.8 | 25 | PDB header:transcription regulator Chain: A: PDB Molecule:response regulatory protein; PDBTitle: low resolution structure of response regulator styr
80 | c3hzhA_ |
| not modelled | 99.8 | 22 | PDB header:signaling protein Chain: A: PDB Molecule:chemotaxis response regulator (chey-3); PDBTitle: crystal structure of the chex-chey-bef3-mg+2 complex from2 borrelia burgdorferi
81 | c3grcD_ |
| not modelled | 99.8 | 22 | PDB header:transferase Chain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666
82 | c3gl9B_ |
| not modelled | 99.8 | 31 | PDB header:signaling protein Chain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism
83 | c3f6cB_ |
| not modelled | 99.8 | 19 | PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
84 | c3t8yA_ |
| not modelled | 99.8 | 27 | PDB header:hydrolase Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate PDBTitle: crystal structure of the response regulator domain of thermotoga2 maritima cheb
85 | c3hebB_ |
| not modelled | 99.8 | 27 | PDB header:transcription regulator Chain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum
86 | d1mb3a_ |
| not modelled | 99.8 | 28 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
87 | c1p2fA_ |
| not modelled | 99.8 | 27 | PDB header:transcription Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog
88 | c2qvgA_ |
| not modelled | 99.8 | 26 | PDB header:transferase Chain: A: PDB Molecule:two component response regulator; PDBTitle: the crystal structure of a two-component response regulator2 from legionella pneumophila
89 | c2hqoA_ |
| not modelled | 99.8 | 22 | PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism
90 | d1i3ca_ |
| not modelled | 99.8 | 21 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
91 | c2oqrA_ |
| not modelled | 99.8 | 28 | PDB header:transcription,signaling protein Chain: A: PDB Molecule:sensory transduction protein regx3; PDBTitle: the structure of the response regulator regx3 from mycobacterium2 tuberculosis
92 | d1w25a2 |
| not modelled | 99.8 | 21 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
93 | c3q9sA_ |
| not modelled | 99.8 | 34 | PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra(1-215) from deinococcus radiodurans
94 | d2b4aa1 |
| not modelled | 99.8 | 25 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
95 | c2j48A_ |
| not modelled | 99.8 | 22 | PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein.
96 | d1a2oa1 |
| not modelled | 99.8 | 24 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related
97 | d1dcfa_ |
| not modelled | 99.8 | 20 | Fold:Flavodoxin-like Superfamily:CheY-like Family:Receiver domain of the ethylene receptor
98 | c3m6mF_ |
| not modelled | 99.8 | 30 | PDB header:lyase/transferase Chain: F: PDB Molecule:sensory/regulatory protein rpfc; PDBTitle: crystal structure of rpff complexed with rec domain of rpfc
99 | c3eodA_ |
| not modelled | 99.8 | 29 | PDB header:signaling protein Chain: A: PDB Molecule:protein hnr; PDBTitle: crystal structure of n-terminal domain of e. coli rssb
100 | c3mmnA_ |
| not modelled | 99.8 | 31 | PDB header:transferase Chain: A: PDB Molecule:histidine kinase homolog; PDBTitle: crystal structure of the receiver domain of the histidine kinase cki12 from arabidopsis thaliana complexed with mg2+
101 | c3n0rA_ |
| not modelled | 99.8 | 26 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution
102 | c3h5iA_ |
| not modelled | 99.8 | 29 | PDB header:transcription Chain: A: PDB Molecule:response regulator/sensory box protein/ggdef PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans
103 | c3nhmA_ |
| not modelled | 99.8 | 26 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from myxococcus xanthus
104 | c1qvrB_ |
| not modelled | 99.8 | 20 | PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
105 | c3luaA_ |
| not modelled | 99.8 | 20 | PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum
106 | c3c97A_ |
| not modelled | 99.8 | 21 | PDB header:signaling protein, transferase Chain: A: PDB Molecule:signal transduction histidine kinase; PDBTitle: crystal structure of the response regulator receiver domain2 of a signal transduction histidine kinase from aspergillus3 oryzae
107 | c2hqrA_ |
| not modelled | 99.8 | 18 | PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism
108 | c3snkA_ |
| not modelled | 99.8 | 18 | PDB header:signaling protein Chain: A: PDB Molecule:response regulator chey-like protein; PDBTitle: crystal structure of a response regulator chey-like protein (mll6475)2 from mesorhizobium loti at 2.02 a resolution
109 | c3ktoA_ |
| not modelled | 99.8 | 18 | PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver protein2 from pseudoalteromonas atlantica
110 | c3ilhA_ |
| not modelled | 99.8 | 18 | PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii
111 | c1r6bX_ |
| not modelled | 99.7 | 17 | PDB header:hydrolase Chain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa
112 | c3eqzB_ |
| not modelled | 99.7 | 21 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from colwellia2 psychrerythraea
113 | c3i42A_ |
| not modelled | 99.7 | 22 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey- PDBTitle: structure of response regulator receiver domain (chey-like)2 from methylobacillus flagellatus
114 | c3nbxX_ |
| not modelled | 99.7 | 20 | PDB header:hydrolase Chain: X: PDB Molecule:atpase rava; PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp
115 | c1in8A_ |
| not modelled | 99.7 | 19 | PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v
116 | c3pxiB_ |
| not modelled | 99.7 | 18 | PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc
117 | d1um8a_ |
| not modelled | 99.7 | 19 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain
118 | c3lufB_ |
| not modelled | 99.7 | 26 | PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein
119 | d1qvra3 |
| not modelled | 99.7 | 19 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain
120 | d1k68a_ |
| not modelled | 99.7 | 18 | Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0