123 c3pvsA_ Probab=99.70   E-value=1.9e-16  Score=128.84  Aligned_columns=246  Identities=15%

Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC-EEECCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHH
Q ss_conf             112222122222222211002333311345652-0221688888999999876338757986560563118966866654
Q batch____       132 PAVTASQFGMVGKSPAMQHLLSEIALVAPSEAT-VLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESEL  210 (441)
Q Consensus       132 ~~~~~~~~~lig~S~~~~~l~~~i~~~A~~~~p-vli~Ge~GtGK~~~A~~iH~~s~~~~~pfv~v~c~~~~~~~~~~~l  210 (441)
                      +.......+++|+...+.......+.+.....| ++|+|++||||+++|++|+...   +.+|+.+||.......+...+
T Consensus         6 r~RP~~l~divGq~~~~~~~~~L~~~i~~~~~~slIL~GppGtGKTtlA~~iA~~~---~~~fi~ina~~~~v~~ir~ii   82 (414)
T c3pvsA_           6 RMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA---NADVERISAVTSGVKEIREAI   82 (414)
T ss_dssp             HTCCCSTTTCCSCHHHHSTTSHHHHHHHHTCCCEEEEECSTTSSHHHHHHHHHHHT---TCEEEEEETTTCCHHHHHHHH
T ss_pred             HHCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHH
T ss_conf             64668775610829999889999999975999849997698898899999999971---998999975447989999999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEEECCCCCHHHHHH
Q ss_conf             17767778897622168165358885998276886999999999998519675668986556311177137889789988
Q batch____       211 FGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVN  290 (441)
Q Consensus       211 fg~~~~~~~~~~~~~~g~~~~a~~GtL~l~~i~~l~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~riI~~s~~~l~~~~~  290 (441)
                                  ..-..........+||||||+.+.      |+..++++.             +.+|++|+.+...   
T Consensus        83 ------------~~a~~~~~~~~~~ILfIDEi~rla------LL~~lE~~~-------------iilI~aTten~~~---  128 (414)
T c3pvsA_          83 ------------ERARQNRNAGRRTILFVDEVHRFA------FLPHIEDGT-------------ITFIGATTENPSF---  128 (414)
T ss_dssp             ------------HHHHHHHHTTCCEEEEEETTTCCC------CHHHHHTTS-------------CEEEEEESSCGGG---
T ss_pred             ------------HHHHHHHHCCCCCEEEEECHHHHH------HHHHHHCCC-------------EEEEEEECCCCHH---
T ss_conf             ------------998751112588089984135766------578754498-------------4899982676044---


Q ss_pred             CCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             68975568962173688515100471328999999999999993669988898999998738999828999999999998
Q batch____       291 AGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVV  370 (441)
Q Consensus       291 ~~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~~s~~a~~~L~~y~WpgNi~eL~~~i~~~~~  370 (441)
                        .+.+.|..|+..+.+.-|+    .+|+..++.+.+......++.....+++++++.|..+. .||+|.+.|.++.++.
T Consensus       129 --~i~~aL~SR~~vi~l~~ls----~edi~~il~~~l~~~~~~~~~~~i~i~d~al~~Ia~~s-~GD~R~aLn~LE~a~~  201 (414)
T c3pvsA_         129 --ELNSALLSRARVYLLKSLS----TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELV-NGDARRALNTLEMMAD  201 (414)
T ss_dssp             --SSCHHHHTTEEEEECCCCC----HHHHHHHHHHHHHCTTTSSTTSSEECCHHHHHHHHHHH-CSCHHHHHHHHHHHHH
T ss_pred             --HCCHHHHHHEEEEEECCCC----HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC-CCCHHHHHHHHHHHHH
T ss_conf             --1698888300067716899----89999999999999998708789866989999999857-9998999999999999


Q ss_pred             HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf             6689822688901443104567666775211899999999999998298678999
Q batch____       371 LLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNKTEAA  425 (441)
Q Consensus       371 ~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~l~~~Er~~i~~aL~~~~gn~~~aA  425 (441)
                      .+..+.++...+.................    +.-.+.|.....--.|+-..||
T Consensus       202 ~a~~~~~~~~~i~~~~v~~~~~~~~d~~g----d~hYd~iSA~~KSiRgsD~daa  252 (414)
T c3pvsA_         202 MAEVDDSGKRVLKPELLTEIAGERSARKG----DRFYDLISALHKSVRGSAPDAA  252 (414)
T ss_dssp             HSCBCTTSCEECCHHHHHHHHTCCCCCCC----HHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HCCCCCCCHHHCCHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHHCCCHHHH
T ss_conf             51466766554899999998622047666----7899999999998743786579