199 c1s3sA_ Probab=98.56   E-value=1.7e-07  Score=69.26  Aligned_columns=234  Identities=20%

Q ss_pred             CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-----------CCCCCCCEEECCCCCCCHHHHHHHHH
Q ss_conf             0011012333222222211222212222222221100233331-----------13456520221688888999999876
Q batch____       115 ATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIAL-----------VAPSEATVLIHGDSGTGKELVARAIH  183 (441)
Q Consensus       115 ~~i~~al~~~~~~~~~~~~~~~~~~~lig~S~~~~~l~~~i~~-----------~A~~~~pvli~Ge~GtGK~~~A~~iH  183 (441)
                      ..+.-....................++.|......++.+.+..           -...+..+|++|++||||+++|+++.
T Consensus       158 t~i~~~~~~~~~~~~~~~~~~~~~~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia  237 (436)
T c1s3sA_         158 TVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA  237 (436)
T ss_dssp             CEEECCSCCBCCCTTCCCTTSCCGGGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf             13785155444321012356789534205499999999999975018898974889987538986799899789999998


Q ss_pred             HCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECHHHC-----------CHHHHHH
Q ss_conf             33875798656056311896686665417767778897622168165358885998276886-----------9999999
Q batch____       184 ASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDI-----------SPMMQVR  252 (441)
Q Consensus       184 ~~s~~~~~pfv~v~c~~~~~~~~~~~lfg~~~~~~~~~~~~~~g~~~~a~~GtL~l~~i~~l-----------~~~~Q~~  252 (441)
                      ...   ..+|+.++|         +++++.-.|...+................+|||++|.+           ....-..
T Consensus       238 ~~~---~~~~~~i~~---------~~l~~~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~  305 (436)
T c1s3sA_         238 NET---GAFFFLING---------PEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQ  305 (436)
T ss_dssp             HHH---TCEEEEEEH---------HHHHTSCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHH
T ss_pred             HHC---CCCEEEEEH---------HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf             744---995899730---------68700100158888999999997509948984000032102578874588999999


Q ss_pred             HHHHHHCCCEEECCCCCEEEEEEEEEECCCCCHH---HHHHCCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             9999851967566898655631117713788978---9988689755689621736885151004713289999999999
Q batch____       253 LLRAIQEREVQRVGSNQIISVDVRLIAATHRDLA---AEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQR  329 (441)
Q Consensus       253 L~~~l~~~~~~~~~~~~~~~~~~riI~~s~~~l~---~~~~~~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~  329 (441)
                      ++..+..         .....++-+|++|+.+-.   .+...|+|..       .+.+.+|.-.+|.    .+++.++  
T Consensus       306 ~~~~~~~---------~~~~~~v~vi~tt~~~~~l~~~l~r~~rf~~-------~i~~~~P~~~~R~----~Il~~~~--  363 (436)
T c1s3sA_         306 LLTLMDG---------LKQRAHVIVMAATNRPNSIDPALRRFGRFDR-------EVDIGIPDATGRL----EILQIHT--  363 (436)
T ss_dssp             HHHHHHH---------CCGGGCEEEEEEESCGGGSCGGGTSTTSSCE-------EEECCCCCHHHHH----HHHHHTT--
T ss_pred             HHHHHCC---------CCCCCCEEEEEECCCHHHCCHHHHCCCCCEE-------EEECCCCCHHHHH----HHHHHHH--
T ss_conf             9864302---------2246987999844895888824204240303-------6667898999999----9999984--


Q ss_pred             HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC--------------------CCCCCCHHHHHHHHHC
Q ss_conf             9999366998889899999873899982899999999999866--------------------8982268890144310
Q batch____       330 FAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLL--------------------TGEYISERELPLAIAS  388 (441)
Q Consensus       330 ~~~~~~~~~~~~s~~a~~~L~~y~WpgNi~eL~~~i~~~~~~~--------------------~~~~I~~~~l~~~~~~  388 (441)
                            +..+--+.-.+..|....=--...+|.+++.+++..+                    ....|+.+|+..++.+
T Consensus       364 ------~~~~l~~d~~~~~la~~t~g~~~~dl~~l~~~a~~~a~~r~~~~~~~~~~~~~~~~~~~~~v~~~df~~al~~  436 (436)
T c1s3sA_         364 ------KNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ  436 (436)
T ss_dssp             ------TTSEECTTCCHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHTTTTTCSSCCCBHHHHHHCEECHHHHHHHHCC
T ss_pred             ------CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHC
T ss_conf             ------3898988668788998768998899999999999999998886402002103876673010169989988609