115 c1in8A_ Probab=99.73   E-value=2.5e-15  Score=121.35  Aligned_columns=255  Identities=19%

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHC---CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHH
Q ss_conf             2222122222222211002333311---3456520221688888999999876338757986560563118966866654
Q batch____       134 VTASQFGMVGKSPAMQHLLSEIALV---APSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESEL  210 (441)
Q Consensus       134 ~~~~~~~lig~S~~~~~l~~~i~~~---A~~~~pvli~Ge~GtGK~~~A~~iH~~s~~~~~pfv~v~c~~~~~~~~~~~l  210 (441)
                      ......+++|.......+...+...   .....+|+|+|++||||+++|++|+...   +.+|+.++|............
T Consensus         4 rp~~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l---~~~~~~i~~~~~~~~~~~~~~   80 (298)
T c1in8A_           4 RPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQGDMAAI   80 (298)
T ss_dssp             SCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCSHHHHHHH
T ss_pred             CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCCCHHHHHH
T ss_conf             89997781270999999999999986338888857998698898889999999970---997999941553320124566


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEEECCCCCHHHHHH
Q ss_conf             17767778897622168165358885998276886999999999998519675668986556311177137889789988
Q batch____       211 FGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVN  290 (441)
Q Consensus       211 fg~~~~~~~~~~~~~~g~~~~a~~GtL~l~~i~~l~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~riI~~s~~~l~~~~~  290 (441)
                                       ......++++|+++++.++...|+.++..++++.       ......+.++............
T Consensus        81 -----------------~~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~  136 (298)
T c1in8A_          81 -----------------LTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQ-------IDIQPFTLVGATVRSGLLSSPL  136 (298)
T ss_dssp             -----------------HHTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSC-------CCCCCCEEEEEESCGGGSCHHH
T ss_pred             -----------------HHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCC-------CCCCEEEECCCCCCHHHCCCHH
T ss_conf             -----------------8851379989994236769899999999970553-------3444066526545856314643


Q ss_pred             CCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             68975568962173688515100471328999999999999993669988898999998738999828999999999998
Q batch____       291 AGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVV  370 (441)
Q Consensus       291 ~~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~~s~~a~~~L~~y~WpgNi~eL~~~i~~~~~  370 (441)
                      ...|..         .+..++.....      ...++...+.+.+.   .++.++++.+..+ |+||+|++.++++.++.
T Consensus       137 ~~~~~~---------~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~i~~~-~~g~~R~~~~ll~~~~~  197 (298)
T c1in8A_         137 RSRFGI---------ILELDFYTVKE------LKEIIKRAASLMDV---EIEDAAAEMIAKR-SRGTPRIAIRLTKRVRD  197 (298)
T ss_dssp             HTTCSE---------EEECCCCCHHH------HHHHHHHHHHHTTC---CBCHHHHHHHHHT-STTCHHHHHHHHHHHHH
T ss_pred             HHHHHH---------HCCCCCCCHHH------HHHHHHHHHHHCCC---CCCHHHHHHHHHH-CCCCHHHHHHHHHHHHH
T ss_conf             323443---------11367898999------99999999998298---5588999999998-39998999999999999


Q ss_pred             HCC---CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC---HHHHHHHHCCCHHHHHHHHC
Q ss_conf             668---98226889014431045676667752118999999999999982986---78999885899889998741
Q batch____       371 LLT---GEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGN---KTEAARQLGITRKTLLAKLS  440 (441)
Q Consensus       371 ~~~---~~~I~~~~l~~~~~~~~~~~~~~~~~~~l~~~Er~~i~~aL~~~~gn---~~~aA~~LGisR~tL~rklk  440 (441)
                      .+.   ...|+.+++...+.........      ..+.+++.+...+...+++   ....|+.||++.+++..+++
T Consensus       198 ~~~~~~~~~i~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~  267 (298)
T c1in8A_         198 MLTVVKADRINTDIVLKTMEVLNIDDEG------LDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYE  267 (298)
T ss_dssp             HHHHHTCSSBCHHHHHHHHHHHTCCTTC------CCHHHHHHHHHHHHHSTTCCBCHHHHHHHHTSCHHHHHHTTH
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHCCCCHH------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             9985298876989999999751255101------114689999999998176954799999985999899999976