BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (107 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria ... 220 1e-56 UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=E... 152 3e-36 UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmanie... 146 2e-34 UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobact... 135 5e-31 UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonu... 130 2e-29 UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular or... 125 4e-28 UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobac... 124 6e-28 UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=So... 117 1e-25 UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=S... 117 1e-25 UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=P... 111 6e-24 UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria... 110 1e-23 UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterob... 110 2e-23 UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 ... 109 2e-23 UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mir... 109 3e-23 UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia... 109 3e-23 UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwa... 109 3e-23 UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=E... 109 3e-23 UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID... 108 4e-23 UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA... 106 2e-22 UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=D... 105 4e-22 UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriace... 103 2e-21 UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Pr... 102 3e-21 UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwin... 102 3e-21 UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Entero... 102 4e-21 UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=S... 101 9e-21 UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=S... 100 3e-20 UniRef50_C8QA11 Transcriptional regulator, AraC family n=1 Tax=P... 99 4e-20 UniRef50_B2Q528 Putative uncharacterized protein n=1 Tax=Provide... 99 5e-20 UniRef50_P0ACH6 Multiple antibiotic resistance protein marA n=13... 97 2e-19 UniRef50_A2TEG4 AraC-like protein (Fragment) n=1 Tax=Serratia ma... 94 9e-19 UniRef50_UPI0001A4290C hypothetical protein PcarcW_09175 n=1 Tax... 94 1e-18 UniRef50_A4WA37 Transcriptional regulator, AraC family n=3 Tax=E... 94 1e-18 UniRef50_C4X996 Regulatory protein n=4 Tax=Klebsiella RepID=C4X9... 93 2e-18 UniRef50_C8QG57 Transcriptional regulator, AraC family n=1 Tax=P... 92 4e-18 UniRef50_D0ZAS7 Transcriptional regulator, AraC family n=2 Tax=E... 92 5e-18 UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=... 92 7e-18 UniRef50_C8Q9G3 Transcriptional regulator, AraC family n=1 Tax=P... 92 7e-18 UniRef50_D2BST7 Transcriptional regulator, AraC family n=2 Tax=E... 90 3e-17 UniRef50_C5BDV7 Transcriptional regulator, AraC family n=45 Tax=... 89 4e-17 UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Cl... 89 5e-17 UniRef50_C2LMQ2 Regulatory protein n=1 Tax=Proteus mirabilis ATC... 89 5e-17 UniRef50_C1FM43 AraC-family transcriptional regulator n=2 Tax=Cl... 87 1e-16 UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=... 87 2e-16 UniRef50_B0MIQ9 Putative uncharacterized protein n=1 Tax=Anaeros... 86 3e-16 UniRef50_UPI0001A437FB DNA-binding transcriptional activator Mar... 85 6e-16 UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Ba... 85 8e-16 UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostri... 84 1e-15 UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=C... 84 1e-15 UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escheri... 84 2e-15 UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=B... 84 2e-15 UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Cl... 84 2e-15 UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC... 84 2e-15 UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=A... 83 2e-15 UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1... 83 3e-15 UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=C... 83 3e-15 UniRef50_A6FJ46 Uncharacterized protein conserved in bacteria n=... 83 3e-15 UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=... 82 4e-15 UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=C... 82 4e-15 UniRef50_A8FAK8 Possible AraC family transcriptional regulator n... 82 5e-15 UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Ba... 82 5e-15 UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridial... 82 5e-15 UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=... 82 6e-15 UniRef50_B7GST4 Transcription activator, effector binding n=1 Ta... 82 7e-15 UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio ... 82 8e-15 UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=D... 81 9e-15 UniRef50_C1FTY8 Transcriptional regulator, AraC family n=16 Tax=... 81 1e-14 UniRef50_C8QF79 Transcriptional regulator, AraC family n=1 Tax=P... 81 1e-14 UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B... 81 1e-14 UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=... 80 1e-14 UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=C... 80 2e-14 UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2... 80 2e-14 UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostri... 80 2e-14 UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family pr... 79 4e-14 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 79 4e-14 UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 T... 79 5e-14 UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Pa... 79 5e-14 UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio ... 79 5e-14 UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp... 79 6e-14 UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=K... 78 7e-14 UniRef50_A6M032 Transcription activator, effector binding n=19 T... 78 8e-14 UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostri... 78 8e-14 UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmone... 78 8e-14 UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio ... 78 9e-14 UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Ta... 78 9e-14 UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escheri... 78 1e-13 UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus... 78 1e-13 UniRef50_A4BA46 Transcriptional regulator, AraC family protein n... 77 2e-13 UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Ta... 77 2e-13 UniRef50_UPI0001789CA8 transcriptional regulator, AraC family n=... 77 2e-13 UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n... 77 2e-13 UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=... 77 2e-13 UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC ... 76 3e-13 UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC... 76 3e-13 UniRef50_B0SDP4 Transcriptional regulator, AraC family n=2 Tax=L... 76 3e-13 UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 ... 76 4e-13 UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=S... 75 5e-13 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 75 5e-13 UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevi... 75 6e-13 UniRef50_C6LAX2 Regulatory protein SoxS n=1 Tax=Bryantella forma... 75 6e-13 UniRef50_C6MNU8 Transcriptional regulator, AraC family n=1 Tax=G... 75 7e-13 UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n... 75 8e-13 UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=C... 75 9e-13 UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteri... 75 9e-13 UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vi... 74 1e-12 UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=C... 74 1e-12 UniRef50_Q12PA0 Transcriptional regulator, AraC family n=1 Tax=S... 74 1e-12 UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=D... 74 1e-12 UniRef50_C0BW87 Putative uncharacterized protein n=2 Tax=Clostri... 74 1e-12 UniRef50_C6PRW6 Transcriptional regulator, AraC family n=1 Tax=C... 74 2e-12 UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 T... 74 2e-12 UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Des... 74 2e-12 UniRef50_B0NCA1 Putative uncharacterized protein n=1 Tax=Clostri... 74 2e-12 UniRef50_UPI0001C3596C AraC family transcriptional regulator n=1... 74 2e-12 UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepI... 74 2e-12 UniRef50_A9KPU7 Transcriptional regulator, AraC family n=1 Tax=C... 73 3e-12 UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1... 73 3e-12 UniRef50_A9IAC9 Transcriptional regulator, AraC family n=1 Tax=B... 73 3e-12 UniRef50_C4IAX6 Transcriptional regulator, AraC family n=2 Tax=C... 72 4e-12 UniRef50_A6UD97 Transcription activator effector binding n=14 Ta... 72 4e-12 UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n... 72 4e-12 UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1... 72 4e-12 UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX 72 4e-12 UniRef50_A1ZSG3 Transcriptional regulator, AraC type, putative n... 72 5e-12 UniRef50_C1FNH9 Transcriptional regulator, AraC family n=11 Tax=... 72 5e-12 UniRef50_A5Z7H2 Putative uncharacterized protein n=1 Tax=Eubacte... 72 6e-12 UniRef50_UPI0001973804 AraC-family transcriptional regulator n=1... 72 6e-12 UniRef50_B6FT88 Putative uncharacterized protein n=1 Tax=Clostri... 72 6e-12 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 72 6e-12 UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=... 72 7e-12 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 72 7e-12 UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Cl... 72 8e-12 UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobac... 72 8e-12 UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostri... 71 9e-12 UniRef50_B8I4L9 Transcriptional regulator, AraC family n=2 Tax=C... 71 9e-12 UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=F... 71 1e-11 UniRef50_UPI0001789679 transcriptional regulator, AraC family n=... 71 1e-11 UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostri... 71 1e-11 UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reineke... 71 1e-11 UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curviba... 71 1e-11 UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=C... 71 1e-11 UniRef50_UPI0001745354 AraC family transcriptional regulatory pr... 71 1e-11 UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID... 70 1e-11 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 70 1e-11 UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostri... 70 2e-11 UniRef50_C5BA25 DNA-binding transcriptional dual regulator n=2 T... 70 2e-11 UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n... 70 2e-11 UniRef50_A0AHP4 Complete genome n=16 Tax=Listeria RepID=A0AHP4_L... 70 2e-11 UniRef50_Q15WE0 Transcriptional regulator, AraC family n=2 Tax=G... 70 2e-11 UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=C... 70 2e-11 UniRef50_A5FBU0 Transcriptional regulator, AraC family n=1 Tax=F... 70 2e-11 UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID... 70 2e-11 UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryan... 70 2e-11 UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus ... 70 2e-11 UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1... 70 2e-11 UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 ... 70 2e-11 UniRef50_B6FV70 Putative uncharacterized protein n=3 Tax=Clostri... 70 2e-11 UniRef50_B5JGT3 Bacterial transcription activator, effector bind... 70 2e-11 UniRef50_C6IFE4 AraC family transcription regulator n=9 Tax=Bact... 69 3e-11 UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=B... 69 4e-11 UniRef50_A6TN59 Helix-turn-helix-domain containing protein, AraC... 69 4e-11 UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=F... 69 4e-11 UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=C... 69 4e-11 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 69 4e-11 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 69 5e-11 UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 T... 69 5e-11 UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostri... 69 5e-11 UniRef50_C6LHX0 Transcriptional regulator, AraC family n=1 Tax=B... 69 5e-11 UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicu... 69 6e-11 UniRef50_UPI0001C352BF transcriptional regulator, AraC family pr... 69 6e-11 UniRef50_D0LEJ4 Helix-turn-helix-domain containing protein AraC ... 69 7e-11 UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Ba... 68 7e-11 UniRef50_A9KR86 Transcriptional regulator, AraC family n=21 Tax=... 68 7e-11 UniRef50_UPI0001C3636B helix-turn-helix domain-containing protei... 68 7e-11 UniRef50_D2LQS1 Transcriptional regulator, AraC family n=1 Tax=B... 68 7e-11 UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=C... 68 8e-11 UniRef50_A1ZL96 Transcriptional regulator, AraC-type n=1 Tax=Mic... 68 8e-11 UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 ... 68 1e-10 UniRef50_Q13JQ4 Transcriptional regulator, AraC family n=11 Tax=... 68 1e-10 UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_E... 68 1e-10 UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=S... 68 1e-10 UniRef50_B7GNV2 Transcriptional regulator, AraC family n=1 Tax=B... 67 1e-10 UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) pro... 67 1e-10 UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Er... 67 1e-10 UniRef50_C3PJK8 HTH-type transcriptional regulator n=2 Tax=Coryn... 67 1e-10 UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=C... 67 1e-10 UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salm... 67 1e-10 UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 T... 67 1e-10 UniRef50_B6GD23 Putative uncharacterized protein n=1 Tax=Collins... 67 1e-10 UniRef50_A7B0M3 Putative uncharacterized protein n=3 Tax=Clostri... 67 1e-10 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 67 2e-10 UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID... 67 2e-10 UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=S... 67 2e-10 UniRef50_C4IM74 Transcriptional regulator, AraC family n=2 Tax=C... 67 2e-10 UniRef50_C5RQY0 Transcriptional regulator, AraC family n=1 Tax=C... 67 2e-10 UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Ple... 67 2e-10 UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=P... 67 2e-10 UniRef50_A6TUU5 Transcription activator, effector binding n=1 Ta... 67 2e-10 UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=... 67 2e-10 UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. ... 67 2e-10 UniRef50_C6D8S9 Two component transcriptional regulator, AraC fa... 67 2e-10 UniRef50_C6D6D8 Transcriptional regulator, AraC family n=1 Tax=P... 67 2e-10 UniRef50_C5EMR3 Transcriptional regulator n=4 Tax=Clostridiales ... 67 2e-10 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 67 2e-10 UniRef50_C6CVD2 Two component transcriptional regulator, AraC fa... 67 2e-10 UniRef50_A8MLY7 Transcriptional regulator, AraC family n=1 Tax=A... 67 2e-10 UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=B... 67 2e-10 UniRef50_Q187G0 AraC-family transcriptional regulator n=37 Tax=r... 67 3e-10 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 67 3e-10 UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=P... 66 3e-10 UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides R... 66 3e-10 UniRef50_A9KR14 Transcriptional regulator, AraC family n=1 Tax=C... 66 3e-10 UniRef50_C4Z408 Two-component system, response regulator YesN n=... 66 3e-10 UniRef50_B5CW93 Sensor protein n=1 Tax=Bacteroides plebeius DSM ... 66 3e-10 UniRef50_A6M0H0 Transcription activator, effector binding n=2 Ta... 66 3e-10 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 66 3e-10 UniRef50_D1BNL8 Transcriptional regulator, AraC family n=5 Tax=V... 66 4e-10 UniRef50_C0CRX4 Putative uncharacterized protein n=1 Tax=Blautia... 66 4e-10 UniRef50_C9AWD9 AraC-family transcriptional regulator n=5 Tax=Fi... 66 4e-10 UniRef50_A4QAY1 Putative uncharacterized protein n=1 Tax=Coryneb... 66 4e-10 UniRef50_Q2SKI5 AraC-type DNA-binding domain-containing protein ... 66 4e-10 UniRef50_Q63B02 Transcriptional regulator, AraC family n=72 Tax=... 66 4e-10 UniRef50_O31249 Transcriptional regulator (XylS/AraC family) n=5... 66 4e-10 UniRef50_D1T3G0 Transcriptional regulator, AraC family n=1 Tax=A... 66 4e-10 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 66 4e-10 UniRef50_A6LX85 Transcription activator, effector binding n=2 Ta... 66 4e-10 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 65 5e-10 UniRef50_C5RPC5 Transcriptional regulator, AraC family n=2 Tax=B... 65 5e-10 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 65 6e-10 UniRef50_A9DRZ1 Transcriptional regulator, AraC family protein n... 65 6e-10 UniRef50_C1PBK0 Transcriptional regulator, AraC family n=1 Tax=B... 65 6e-10 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 65 6e-10 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 65 7e-10 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 65 7e-10 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 65 7e-10 UniRef50_A1RF43 Transcriptional regulator, AraC family n=2 Tax=S... 65 7e-10 UniRef50_A4CH99 Transcriptional regulator n=1 Tax=Robiginitalea ... 65 7e-10 UniRef50_UPI000178A004 two component transcriptional regulator, ... 65 7e-10 UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n... 65 8e-10 UniRef50_C0WE40 Putative uncharacterized protein n=1 Tax=Acidami... 65 8e-10 UniRef50_Q1QTE9 Transcriptional regulator, AraC family n=1 Tax=C... 65 8e-10 UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=D... 65 9e-10 UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=B... 65 9e-10 UniRef50_C7PQL4 Transcriptional regulator, AraC family n=1 Tax=C... 65 9e-10 UniRef50_Q17ZT7 AraC-family transcriptional regulator n=4 Tax=Cl... 65 9e-10 UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Ta... 65 9e-10 UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=... 65 9e-10 UniRef50_C6LJK3 Transcriptional regulator, AraC family n=1 Tax=B... 65 9e-10 UniRef50_B8I9A3 Transcriptional regulator, AraC family n=1 Tax=C... 65 1e-09 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 65 1e-09 UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=L... 65 1e-09 >UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria RepID=SOXS_ECO57 Length = 107 Score = 220 bits (560), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/107 (100%), Positives = 107/107 (100%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL Sbjct: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL Sbjct: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 >UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=C8QFY6_9ENTR Length = 142 Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 72/107 (67%), Positives = 86/107 (80%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++II L WID+++D+ L+ID VA KSGYSKW+LQRMFRTVT QTLG YIR+RRL Sbjct: 1 MMQEEIIHSLTHWIDQNLDKTLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LAA LR T+RP+FDIAM GY SQQTFSRVFRRQF +TP+ YRH + Sbjct: 61 LAAEALRQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRHTM 107 >UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmaniensis RepID=B2VKB8_ERWT9 Length = 141 Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/105 (66%), Positives = 82/105 (78%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H II L WID ++ + L+ID VA KSGYSKW+LQRMFRTVT QTLG YIR+RRL LA Sbjct: 2 HDDIINTLTHWIDNNLGKNLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLTLA 61 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A LR + RP+FDIAM GY SQQTFSRVFRRQF +TP+DYR+ + Sbjct: 62 AEALRQSHRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTDYRNTM 106 >UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobacteriaceae RepID=B4EY53_PROMH Length = 300 Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 63/104 (60%), Positives = 80/104 (76%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+AW+D ++DQPL++D VA K+GYSKW+LQRMF+ VT Q +G YIR RRL Sbjct: 1 MDQTNIIRDLLAWLDNNLDQPLSLDNVATKAGYSKWHLQRMFKEVTGQAIGSYIRSRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AAV LR T RPI DIA+ + SQQTF+R F++QFDRTP+ YR Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFDRTPALYR 104 >UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TW49_9ENTR Length = 305 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 61/104 (58%), Positives = 76/104 (73%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+ WID H+DQPL +D VA K+GYSKW+LQRMF+ +T Q +G YIR RRL Sbjct: 1 MDQNNIIRDLLYWIDTHLDQPLFLDNVAAKAGYSKWHLQRMFKNITQQAIGSYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AAV LR T RPI DIA+ + SQQTF+R F++QF TP+ YR Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFGITPALYR 104 >UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular organisms RepID=C4X304_KLEPN Length = 289 Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 58/104 (55%), Positives = 77/104 (74%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL++W++ H+DQPL++D VA K+GYSKW+LQRMF+ VT +G YIR RRL Sbjct: 1 MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +AV LR T RPI DIA+ + SQQTF+R F++QF TP+ YR Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYR 104 >UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobacteriaceae RepID=ROB_ECO57 Length = 289 Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 58/104 (55%), Positives = 77/104 (74%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+ W++ H+DQPL++D VA K+GYSKW+LQRMF+ VT +G YIR RRL Sbjct: 1 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +AV LR T RPI DIA+ + SQQTF+R F++QF +TP+ YR Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYR 104 >UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NSQ1_SODGM Length = 201 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 54/104 (51%), Positives = 75/104 (72%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M IIQDL++W++ H+D PL ++ VA++SGYSKW+LQR F+ T Q +G YIR RRL Sbjct: 1 MDQAGIIQDLLSWLEGHLDTPLTLNRVAERSGYSKWHLQRKFKLATGQAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A + LR T R + DIA+ G+ SQQTF+R F++QF +TP+ YR Sbjct: 61 RAVLALRLTSRSVADIALQYGFDSQQTFTRPFKKQFIQTPALYR 104 >UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GJ26_SERP5 Length = 288 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 52/99 (52%), Positives = 75/99 (75%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I++L+ WI++++ PL++D+V+ KSGYSKWYLQRMF+T T +L YIR RRL LAA L Sbjct: 8 IRELLVWIEDNLTNPLSLDIVSAKSGYSKWYLQRMFKTQTGLSLASYIRARRLYLAAFAL 67 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 R T++ I DI+++ + +QQTFSR F++ F +PS YRH Sbjct: 68 RFTQKTILDISIEYQFDNQQTFSRCFKKHFAESPSVYRH 106 >UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QBQ6_9ENTR Length = 288 Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 49/101 (48%), Positives = 72/101 (71%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ I DL+ WI+ ++ LNID+++ KSGYSKW++QRMF+ +T QTL Y R+RRL ++A Sbjct: 8 KQYINDLVDWIEANLTDELNIDLISLKSGYSKWHMQRMFKEMTGQTLASYTRKRRLTMSA 67 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + LR T P+ DIA+ G+ +QQ F+RVF+ F TP YR Sbjct: 68 MALRLTRMPLIDIAVRFGFDNQQNFTRVFKNHFSLTPGAYR 108 >UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria RepID=RAMA_KLEPN Length = 113 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 49/100 (49%), Positives = 75/100 (75%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++I ++ WID+++ QPL ID +A+ +GYSKW+LQR+F ++LG YIR+R+LLLAA Sbjct: 6 QVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKLLLAAR 65 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +LR T++ ++DI + G+ SQQTF+RVF R F++ P YR Sbjct: 66 DLRDTDQRVYDICLKYGFDSQQTFTRVFTRTFNQPPGAYR 105 >UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B6XK96_9ENTR Length = 310 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/106 (48%), Positives = 74/106 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +I+++I WI+++++ L++D VA KSGY+KW+ QR+F+T T LG YIR RRL Sbjct: 17 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKTQTGLALGAYIRARRLS 76 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AV LR T I DI++ + SQQTF R F++QF TPS+YR R Sbjct: 77 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKR 122 >UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 Tax=Enterobacteriaceae RepID=D1NY75_9ENTR Length = 123 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 4 QKIIQDLIAWIDEHI--DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + ++ ++I W++ + ++ + ID +A KSGYSKW+LQR+F+ + TLG+Y+R+RRLL Sbjct: 3 ESVVNEIIRWLESQLQRNEGIKIDTIADKSGYSKWHLQRVFKELKGCTLGEYVRKRRLLE 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA LR PI DIA+ G+ SQ TF+R+F++ FD TP+ +R Sbjct: 63 AAKSLREGNLPILDIALQYGFSSQATFTRIFKKHFDTTPAKFR 105 >UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mirabilis RepID=C2LM40_PROMI Length = 298 Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 74/106 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +++D+I WI++++D L++D++A+KSGY+KW+ QR+F+ T +LG Y+ RRL Sbjct: 1 MLQENVVKDIIVWIEQNLDSRLSLDIIAEKSGYTKWHFQRLFKAYTGISLGKYVLARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR T + DI++ + SQQTF R F++QF+ TPS+YR + Sbjct: 61 CGAYALRITRSSLLDISLKYHFDSQQTFCRAFKKQFNITPSEYRKK 106 >UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia RepID=D1P487_9ENTR Length = 295 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 50/106 (47%), Positives = 73/106 (68%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +I+++I WI+++++ L++D VA KSGY+KW+ QR+F+ T LG YIR RRL Sbjct: 1 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKNQTGLALGSYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AV LR T I DI++ + SQQTF R F++QF TPS+YR R Sbjct: 61 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKR 106 >UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwardsiella RepID=C5BEG3_EDWI9 Length = 122 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 47/104 (45%), Positives = 76/104 (73%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 HQ ++ LI WI++++D+ + ID +A+++GYSKWYLQR+F+ VT +L Y+R+RRL+ A Sbjct: 7 HQLLVDALIQWIEQNLDKRILIDDIAERAGYSKWYLQRLFKEVTGYSLAAYVRKRRLIRA 66 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A EL+ + + I +I + G+ SQQTFSR F+R++ +P YR + Sbjct: 67 AAELQRSNKKIMEIMLQYGFDSQQTFSRAFKRRYGTSPGSYRQQ 110 >UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=Enterobacteriaceae RepID=A8GD44_SERP5 Length = 118 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 47/104 (45%), Positives = 73/104 (70%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ I DLI WID ++++ L+I+ VA ++GYSKW+LQRMF+ T LG+YIR ++L Sbjct: 1 MNSTGFITDLIEWIDNNLEEKLDINTVAGRAGYSKWHLQRMFKRQTGYALGEYIRMQKLR 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 ++A L + PI +A+ LG+ SQQ+F+R F+R + +TP D+R Sbjct: 61 VSAERLANSGEPIVSVAISLGFDSQQSFNRSFKRHYGQTPGDWR 104 >UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID=TETD_ECOLX Length = 138 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 52/102 (50%), Positives = 72/102 (70%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H +I+D++ WI+ ++DQ L +D VA K+GY+KWY QR+F+ VT TL YIR RRL A Sbjct: 26 HTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRARRLTKA 85 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AVELR T++ I +IA+ + SQQ+F+R F+ F TPS YR Sbjct: 86 AVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYR 127 >UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA n=49 Tax=Enterobacteriaceae RepID=YKGA_ECOLI Length = 239 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 76/106 (71%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M QKI+Q L+ WI+ +++ P++I+ +A+KSGYS+ +Q +FR H LG+YIR+RRL Sbjct: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA+ +R T + + DIA+ L + SQQ+FSR F++ F +P +YRHR Sbjct: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 >UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6C946_DICDC Length = 313 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 49/100 (49%), Positives = 68/100 (68%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I DL+ WI+ H++ PL I V KSGYSKW+LQRMF+ T +LG YIR RRL AAV Sbjct: 10 RFIADLVGWIESHLESPLMISDVTAKSGYSKWHLQRMFKKETGISLGTYIRNRRLSQAAV 69 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 EL+ T + I ++A+ + SQQ+F+R F++ F +P YR Sbjct: 70 ELKLTSQTIQEVALRYCFDSQQSFTRTFKKHFGTSPGHYR 109 >UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriaceae RepID=PQRA_PROVU Length = 122 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Query: 4 QKIIQDLIAWIDEHI--DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + ++ D++ W++ + ++ + ID +A KSGYSKW+LQR+F+ TLG+Y+R+RRLL Sbjct: 3 ENVVNDILKWLETQLQRNEGIKIDTIANKSGYSKWHLQRIFKDFKGCTLGEYVRKRRLLE 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA L+ + I DIA+ G+ SQ TF+R+F++ F+ TP+ +R Sbjct: 63 AAKSLQEKDMSILDIALMYGFSSQATFTRIFKKHFNTTPAKFR 105 >UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Proteus RepID=B4EVW5_PROMH Length = 304 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 49/100 (49%), Positives = 72/100 (72%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++I++L+ WI+ ++++PL +D VA KSGY+KW+LQR+F+ T TL YIR RRL AA Sbjct: 20 EVIKELLLWIEVNLEKPLLLDDVAIKSGYTKWHLQRVFKQATGLTLASYIRGRRLTKAAT 79 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 ELR T+ P+ IA+ + SQQ+F+R F+ F TPS+YR Sbjct: 80 ELRLTKLPVLTIALRYQFDSQQSFTRRFKAVFGVTPSEYR 119 >UniRef50_B2VHH7 Putative transcriptional regulator n=1 Tax=Erwinia tasmaniensis RepID=B2VHH7_ERWT9 Length = 110 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 49/103 (47%), Positives = 67/103 (65%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +I+ ++ WI+ HI++ LNI+ VA KSGYSKW+LQR F+ TL +IR RRL AA Sbjct: 3 NEIVDVIVDWIECHIEEGLNIEAVAAKSGYSKWHLQRAFKAQKGITLATFIRGRRLEQAA 62 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + + I I+ +LG+ SQQ F RVF++ F TP DYR R Sbjct: 63 QSLVNSTKSIMAISTELGFSSQQCFQRVFKKHFHITPRDYRIR 105 >UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Enterobacter cloacae RepID=Q6WFA3_ENTCL Length = 134 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 70/102 (68%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +++D++ W++ + L ++ +A+KSGYS+W+ QR+F+ T LG+Y+R RRL AAVE Sbjct: 10 VVKDIVQWVENSLTSTLLVEEIAEKSGYSRWHFQRIFKHATGIALGEYVRARRLTCAAVE 69 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ T + + +IA+ G+ SQQTF+R F+ +F P YR ++ Sbjct: 70 LKLTTKTVLEIALHYGFESQQTFTRSFKNKFHLPPGRYRKQI 111 >UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8GHJ0_SERP5 Length = 140 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 45/98 (45%), Positives = 67/98 (68%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I +++ WI+ ++ LNI +AKKSGYS++++QR+F+ TL YIR RR+ AA+ L Sbjct: 9 INEMLKWIEGNLGAELNIKTIAKKSGYSRFHIQRLFKLHAGLTLAQYIRMRRVTEAAIAL 68 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 R T+R I DIA+D G+ SQQ F+R F++Q TP + R Sbjct: 69 RFTDRKIMDIALDYGFDSQQVFTRTFKKQLKTTPGELR 106 >UniRef50_A8G9B3 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8G9B3_SERP5 Length = 292 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/104 (50%), Positives = 73/104 (70%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M Q++I L+AWI++++DQPL +D +A KSGYSKW+LQR+F+ +T + LG Y R+RRL Sbjct: 1 MYQQQVITALLAWIEQNLDQPLTLDDIAAKSGYSKWHLQRLFKELTGEILGTYARRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA ELR T + IA + SQQTF+R F++QF P+ YR Sbjct: 61 AAARELRLTNHGVAFIADKYQFDSQQTFTRCFKKQFGMPPAGYR 104 >UniRef50_C8QA11 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QA11_9ENTR Length = 132 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 67/100 (67%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I L+ WI+ +I+Q L ++ VA+++GYS+W+LQR+FR+ T LG YIR+R+L + + L Sbjct: 8 IHQLLLWIEANIEQKLILETVAQRAGYSQWHLQRLFRSYTGIALGSYIRERKLTASVIAL 67 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 T P+ IA+ G+ SQQT+ R FRR F+ P +R + Sbjct: 68 LTDNTPLMHIALQFGFDSQQTYCRTFRRMFNLPPGAFRRK 107 >UniRef50_B2Q528 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q528_PROST Length = 117 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 4/108 (3%) Query: 1 MSH----QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQ 56 MSH + +IQD++ WID ++D+PLNI ++ ++GYSKWY QR+F+ +LG Y+ Sbjct: 1 MSHHTIRENVIQDILLWIDMNVDKPLNIAEISHRAGYSKWYFQRIFKNTVGVSLGQYLLI 60 Query: 57 RRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 RLL + +L+ T I DIA G+ QQ +R F+R+ TP+ YR Sbjct: 61 NRLLKVSSDLKQTNDKIIDIAFRYGFDGQQGLTRAFKRKLKVTPAKYR 108 >UniRef50_P0ACH6 Multiple antibiotic resistance protein marA n=133 Tax=Bacteria RepID=MARA_ECO57 Length = 127 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 66/98 (67%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++ WI+++++ PL+++ V+++SGYSKW+LQRMF+ T +LG YIR R++ A +L Sbjct: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKL 70 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + + PI +A G+ SQQT +R F+ FD P YR Sbjct: 71 KESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 >UniRef50_A2TEG4 AraC-like protein (Fragment) n=1 Tax=Serratia marcescens RepID=A2TEG4_SERMA Length = 122 Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 44/74 (59%), Positives = 55/74 (74%) Query: 31 SGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSR 90 SGYSKW+LQRMFR+ T LG YIR+RRL AA LR+T RPI DIA+ + SQ +FSR Sbjct: 1 SGYSKWHLQRMFRSTTGHALGSYIRERRLSQAAQALRSTPRPILDIALQYHFDSQPSFSR 60 Query: 91 VFRRQFDRTPSDYR 104 F++QF +TP+ YR Sbjct: 61 AFKKQFGKTPAVYR 74 >UniRef50_UPI0001A4290C hypothetical protein PcarcW_09175 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A4290C Length = 126 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 64/101 (63%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 +II+DL WI+ +++ L ID V+ KSG+SKW+LQR+F T +G YIR RRL LA+ Sbjct: 6 EIIKDLRLWIESNLENDLVIDAVSSKSGFSKWHLQRIFVQETGIPIGRYIRNRRLQLASE 65 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 EL T+ I DI + G+ +QQ F+R F R F P +R Sbjct: 66 ELAVTKNTISDIPLKYGFSNQQAFTRTFTRHFRMPPGQWRE 106 >UniRef50_A4WA37 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=A4WA37_ENT38 Length = 120 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 69/104 (66%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + DL+ WID ++D L+I+ VA++SGYSKW+LQR+F+ T L YIR ++L Sbjct: 1 MNTGAFMHDLLDWIDNNLDSRLDIESVARRSGYSKWHLQRLFKEHTGYPLAGYIRAQKLQ 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + L ++ PI ++A+ LG+ SQQ+F+R F+R + + P +R Sbjct: 61 KSVERLTHSDEPILNVAIALGFDSQQSFNRSFKRLYGQAPGAWR 104 >UniRef50_C4X996 Regulatory protein n=4 Tax=Klebsiella RepID=C4X996_KLEPN Length = 176 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 59/99 (59%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++Q ++ WI+ HI L++ +AKKSGYS WY QR F VT TL Y+ +R++ +A + Sbjct: 30 VVQGIVDWIEAHIFDTLSVSAIAKKSGYSHWYFQRQFAMVTGCTLASYVSRRKMTIATIY 89 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L T+ I I+ LGY Q F R F R F +P+ YR Sbjct: 90 LTQTQASIQSISQCLGYEGQAAFCRTFHRHFGMSPTRYR 128 >UniRef50_C8QG57 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QG57_9ENTR Length = 164 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 68/104 (65%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ +I + WI E++DQ L+ID +A+KSGYSKWYLQ++F ++TL YIR+++L Sbjct: 7 NEGVILAVTDWIVENLDQRLSIDDIAQKSGYSKWYLQKLFARCHNETLARYIRKKKLAAC 66 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 VEL+ +E I +A+ + SQQ+F+R F++ TP R + Sbjct: 67 VVELKNSEATIISLAVKYHFESQQSFTRSFKQMMGCTPLSCRKK 110 >UniRef50_D0ZAS7 Transcriptional regulator, AraC family n=2 Tax=Edwardsiella RepID=D0ZAS7_EDWTE Length = 135 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 69/107 (64%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I L WID ++ ++D VA ++GYSKW+LQRMF+ T LG+YIR ++L Sbjct: 19 MYNTDFISALRTWIDSNVAAISSLDDVAARAGYSKWHLQRMFKAHTGVRLGEYIRNKKLD 78 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +A L+ + I DIA+ +G+ SQ++F+R F+R+FD TP ++ + Sbjct: 79 ESARRLKVCQGSILDIALSMGFDSQRSFTRSFKRRFDVTPGVWKKEV 125 >UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=Providencia RepID=AARP_PROST Length = 135 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 68/99 (68%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 II +++ WI+ ++ L++D +A+ SGY+KW+LQR+FR + LG+YIR+RR+ AA E Sbjct: 20 IISEILVWIEGNLTNRLSLDDIAQHSGYTKWHLQRVFRKIVGMPLGEYIRRRRICEAAKE 79 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+TT + DIA+ + SQQ+F++ F+ +PS YR Sbjct: 80 LQTTNLQVIDIALKYQFDSQQSFAKRFKAYLGISPSLYR 118 >UniRef50_C8Q9G3 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q9G3_9ENTR Length = 144 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 66/100 (66%), Gaps = 1/100 (1%) Query: 6 IIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++ D+I WI+EH+ D+ + + + KSGY W+ QR+FR VT LG+Y+R RR++ A Sbjct: 25 VVDDIIHWIEEHLYDETIRVSTITGKSGYGHWHFQRIFREVTGYNLGEYMRLRRVIRATF 84 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + +E+ + +IA+ G+ SQQTF+RV+++ TP + R Sbjct: 85 AIIHSEKTLLEIAVANGFTSQQTFTRVYKKYMHATPGEIR 124 >UniRef50_D2BST7 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=D2BST7_DICD5 Length = 113 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 67/101 (66%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +++I ++I WID++I Q L+ID VA +SGYSKW+LQR+F + + YIR ++L LAA Sbjct: 5 EELITEIIQWIDDNIHQQLSIDDVAARSGYSKWHLQRVFFQKNGKNIAAYIRDKKLALAA 64 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +L ++ + DI G+ SQQ+F+R F +++ P YR Sbjct: 65 YDLVESKDRVLDIGFRYGFDSQQSFTRSFSKKYSIPPQKYR 105 >UniRef50_C5BDV7 Transcriptional regulator, AraC family n=45 Tax=Enterobacteriaceae RepID=C5BDV7_EDWI9 Length = 132 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 64/99 (64%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ L WI+ H+ + + +D +A+ SGYS W++Q++FR T +LG YIR R+L AA Sbjct: 10 LVCALSEWIERHLGRDIYLDELARYSGYSLWHMQKIFRETTGMSLGRYIRLRKLTGAARR 69 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LR ++ I DIA+ G+ SQ F+ +FR+ F TP+ YR Sbjct: 70 LRHSDEGIIDIALCYGFASQSHFTYMFRKHFGMTPTRYR 108 >UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ6_9FIRM Length = 289 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 71/102 (69%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 +IIQ+++ +ID H++ L+ + +++++GYS+++L RMF ++T +L YI++RRL AA Sbjct: 6 QIIQEVVDYIDSHLEDRLDAESISRQAGYSRYHLSRMFTSITGLSLHTYIQRRRLTEAAR 65 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +L T+RP+ DIA+ GY SQQ F+ FR F TP +R + Sbjct: 66 QLVFTDRPVMDIALSAGYGSQQAFTVGFRALFRTTPRAFRKK 107 >UniRef50_C2LMQ2 Regulatory protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LMQ2_PROMI Length = 285 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 64/102 (62%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H KII D++ WI++++ +P++ V KKSGYS+ Y Q +F T T+ YI R+L ++ Sbjct: 2 HDKIINDILDWIEDNLTKPISTIDVIKKSGYSQRYFQDLFLHKTKSTIAKYILSRKLSMS 61 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A+ L+ T I +I+ D + SQQ FSR F+R F TP YR Sbjct: 62 AILLKLTRYSISEISNDYSFTSQQNFSRAFKRYFKVTPEFYR 103 >UniRef50_C1FM43 AraC-family transcriptional regulator n=2 Tax=Clostridium botulinum RepID=C1FM43_CLOBJ Length = 135 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/104 (43%), Positives = 66/104 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +I ++I I+ ++ Q +N+D +A K GYSK++L R+F T+ YI+ RRL Sbjct: 1 MDMKDLILEIIEHIESNLGQEMNLDTIADKFGYSKFHLNRIFFENVGATIYKYIQFRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +AA +L TT +PI +IA D GY SQQ FS FR+ + TP YR Sbjct: 61 VAAEKLVTTGKPIVEIAYDTGYQSQQAFSIAFRQFYGYTPLQYR 104 >UniRef50_B2K4J9 Transcriptional regulator, AraC family n=34 Tax=Enterobacteriaceae RepID=B2K4J9_YERPB Length = 297 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 61/89 (68%) Query: 17 HIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDI 76 ++++ +D VAK SGYSKW+LQR F+++ L YIR R L AAV LR + +PI I Sbjct: 19 NLEKRPTLDDVAKISGYSKWHLQRKFKSIVGLQLASYIRGRVLTRAAVALRISRKPIITI 78 Query: 77 AMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + +LG+ SQQTF+R F+++F TP+ +R Sbjct: 79 SDELGFDSQQTFTRTFKKRFGVTPNSFRQ 107 >UniRef50_B0MIQ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MIQ9_9FIRM Length = 167 Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 1 MSHQK-IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 M QK I++ ++ +I+++I +++D++AK GYSK+YL R+F T T+ Y++ RRL Sbjct: 26 MKQQKEIVEKVVNYIEDNIKSEISVDIIAKNIGYSKFYLNRIFSERTGITIYKYLQSRRL 85 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +AA +L T PI +IA + GY SQQ FS F++ + P YR+ Sbjct: 86 TIAAEKLIKTNEPITEIAYEAGYDSQQAFSLAFKQLYVYPPKIYRN 131 >UniRef50_UPI0001A437FB DNA-binding transcriptional activator MarA n=1 Tax=Pectobacterium carotovorum subsp. brasiliensis PBR1692 RepID=UPI0001A437FB Length = 135 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 61/102 (59%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 HQ II +LI WI + D P+ +VA+++G+S+W++QR+F+ T TLG YI+ +L A Sbjct: 8 HQGIIDELIRWIAQQHDNPVTTAMVAERAGFSRWHMQRVFKQRTGITLGKYIKDVKLGKA 67 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +EL P+ A+ GY SQQTF+R + TP + Sbjct: 68 VLELIKGNEPVIITALQNGYESQQTFTRAIKNYTGLTPGKIK 109 >UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Bacteria RepID=Q17ZV7_CLOD6 Length = 289 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 73/99 (73%), Gaps = 1/99 (1%) Query: 7 IQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I+ + +I++H+ D+ L+++V++K+ GYSK++L RMF +V ++ +YI++RRL AA Sbjct: 8 IEKTLDYIEKHLLDEMLDLNVISKEIGYSKYHLHRMFTSVVGFSVHNYIQRRRLTEAARM 67 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L TE+PI +IA+ GY +Q++FSR F++ F R+P+ +R Sbjct: 68 LIFTEKPIIEIALISGYDTQRSFSRGFKKMFKRSPNFFR 106 >UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RX40_9CLOT Length = 140 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 70/107 (65%), Gaps = 1/107 (0%) Query: 1 MSHQK-IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 M +QK ++ +I +I+EH+++ LN++ +A+ +GYS+++L R+F T T+ Y+++RRL Sbjct: 1 MKNQKHTVRKVIDYIEEHLEEKLNLEQIAEHAGYSRFHLNRIFMEETGGTIHKYVQERRL 60 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AA +L T+ I IA D GY SQQ FS F++ + P YR R Sbjct: 61 TMAAEKLVDTDMDITQIAYDAGYQSQQAFSLAFKQVYLCPPGAYRKR 107 >UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=Clostridiales RepID=C9XKB1_CLODC Length = 294 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 63/94 (67%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 I +I+EH+ + L++D++A YSK++L R F T T+ DYI++R+L AA L ++ Sbjct: 20 IDYIEEHLSEKLDLDIIANAVHYSKYHLHRTFTTSVGLTMHDYIKRRKLTEAAKLLVFSK 79 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +PI +IA+ GY SQQ F+ +F+ + ++P+ YR Sbjct: 80 KPIIEIALIAGYESQQAFTSIFKAMYKKSPNKYR 113 >UniRef50_B6ICR1 Putative transcription regulator n=1 Tax=Escherichia coli SE11 RepID=B6ICR1_ECOSE Length = 294 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 66/106 (62%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II D++ WI+ HI+ + I+ V SGYS+ Y+Q +F+ T +LG Y+++RRL Sbjct: 1 MLQTMIINDILIWIENHIEDGIIIEDVVNLSGYSRRYIQYLFKKETGLSLGGYLKRRRLC 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A+ +R T + DIA+ L + SQQ+FSR F++ F+ P YR R Sbjct: 61 RGAMYVRLTTMRMLDIAVRLRFDSQQSFSREFKKVFNCPPYIYRTR 106 >UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=Bacillales RepID=C6CRA3_PAESJ Length = 297 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 64/104 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M H IQ I +I+E + + L+++ +A ++G+S ++ QR+F +T T+ +YIR+RRL Sbjct: 11 MEHYTRIQYAITFIEEQLQEALSLEAIAIRAGFSLYHFQRLFHAITGFTVQEYIRKRRLS 70 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA ELR T + DI++ Y SQ+ F+R F F P+ YR Sbjct: 71 RAAEELRVTRHTVLDISVSYQYGSQEAFTRAFAGYFGMAPAQYR 114 >UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q180J9_CLOD6 Length = 160 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 67/101 (66%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I ++I +I+E++ + LN+D +A + YSK++L RMF V T+ YI++RRL AA + Sbjct: 7 VIMEIIDYIEENLTENLNLDKIAYIANYSKYHLHRMFTNVVGCTIHQYIQRRRLTEAARQ 66 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T++ I DIA+ +GY + Q+F+ FR + +P YR++ Sbjct: 67 LIFTDKYIIDIAITVGYSTHQSFTLAFRNLYKESPQVYRNK 107 >UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LY67_CLOB8 Length = 291 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 69/104 (66%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + + D I ++++H+ + ++++ +AK+ +SK++ R+F+ V + +GDY +RRL Sbjct: 1 MNTKNYVLDAIEYLEKHLLEGVSLEQLAKQFNFSKFHYARLFKAVLGENIGDYQMKRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +AA+ L T I +IA+ GY SQ++F+R+F+ F TP DYR Sbjct: 61 IAAMSLLETRDSILNIAIMCGYSSQESFTRMFKAYFGITPKDYR 104 >UniRef50_B5EUU0 Transcriptional regulator, AraC family n=3 Tax=Aliivibrio RepID=B5EUU0_VIBFM Length = 299 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 70/100 (70%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I++++ +I ++ID+PL ++++A+ S +S+W LQR+F+ T + Y+R++RL ++A+E+ Sbjct: 14 IENILVFIHQNIDKPLTVEILAEMSCWSRWQLQRVFQNYTGMNVAQYVREQRLSMSALEV 73 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 ++ + DIA G+ S+ FSR F++ F ++P +Y+ + Sbjct: 74 LDKKKRMLDIAYSYGFTSEIAFSRAFKQYFHKSPREYQKQ 113 >UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K6U1_BACHD Length = 300 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 65/104 (62%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MS+ + +Q I +I+ H+ +P++++ VA + YS ++ R+F+ T+ +YI++RRL Sbjct: 1 MSYIQSVQRAIDYIETHLHEPISLEKVAAHASYSYFHFHRLFKATVGCTMSEYIKRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA L T+ I DIA + GY SQ+ F+R F++ F+ P YR Sbjct: 61 KAAYALLETKASIIDIAFEYGYESQEAFTRAFKQWFNVLPGKYR 104 >UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM10_CLOPH Length = 136 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 41/92 (44%), Positives = 58/92 (63%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I+E+ + +D +AK GYSK++L RMF T T+ YI +RRL AA L T++ Sbjct: 11 YIEENFKDDITLDDIAKNVGYSKYHLNRMFLENTGLTIHKYICERRLTEAADLLLYTDQS 70 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 I DIA+ +GY SQQ F+ F++ FD TP YR Sbjct: 71 IVDIALSIGYTSQQAFTLAFKQMFDCTPYKYR 102 >UniRef50_A6FJ46 Uncharacterized protein conserved in bacteria n=1 Tax=Moritella sp. PE36 RepID=A6FJ46_9GAMM Length = 312 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 64/97 (65%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I L+ +I+E+IDQPL+++ +A KS +S+W LQR+F T L Y+R+ +L LAA +L Sbjct: 15 IGKLLDFINENIDQPLSVEQLADKSCWSRWQLQRVFHHETGLNLAQYVRELKLSLAAEQL 74 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 ++ + DIA+ LG+ S+ +FSR F+ F +P Y Sbjct: 75 LGSKSRVVDIALALGFSSEVSFSRTFKNMFAYSPMAY 111 >UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=A7GBT6_CLOBL Length = 289 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 69/104 (66%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + K ++ I +I+E+++Q L + VAK GYS ++ R+F + +T+G+YIR+R++ Sbjct: 1 MDYIKSLEKAIMYIEENLNQDLKTEDVAKSIGYSYYHFTRLFEGLLGETIGNYIRKRKIT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +L T++ I DIA+D + S + F+R F++ +D +P++YR Sbjct: 61 KTAQDLIYTDKRIIDIALDFQFKSPEAFARAFKKIYDISPTEYR 104 >UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=Clostridiales RepID=B8FSY0_DESHD Length = 291 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 65/104 (62%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++K ++ + +I+ H+ + ++ VAK +GYS ++L R F + +++G YI++RRL Sbjct: 1 MDYRKALEHAVMYIENHLGSDIKVEDVAKAAGYSYYHLNRQFTAILGESIGSYIKKRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA ++ T R I DIAM+ G+ S + FSR F+ + +P YR Sbjct: 61 DAAKKILYTNRKIIDIAMENGFESPEAFSRAFKAIYKVSPQTYR 104 >UniRef50_A8FAK8 Possible AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK8_BACP2 Length = 295 Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 70/105 (66%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H+K IQ+ + +I++H+ L + +AK +GYS+++ R+F+ V +++ DY+R+RR+ A Sbjct: 6 HEKTIQETLNYIEQHLKDDLPLQTLAKHAGYSRFHFHRIFKKVIKKSVVDYLRERRMTQA 65 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A +L T++ DIA + SQ++F+R F++ +D +P+ YR L Sbjct: 66 AKDLIHTDQRAIDIAFQYRFSSQESFTRAFKKIYDMSPARYRKLL 110 >UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Bacteria RepID=C3RPB0_9MOLU Length = 286 Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 65/100 (65%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ + +I+E+ D+ ++ID +A + SK+Y QR+F +T +T+ DY++ RRL AA +L Sbjct: 7 IQVTLDYIEENYDKEIDIDKLAAIAHLSKYYYQRLFFRLTKKTVNDYVKLRRLEKAANQL 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + TE+ I DIA+ G+ F+R F+ + TP DYR++ Sbjct: 67 KNTEKRILDIAIACGFSGHSAFTRAFKEVYKITPDDYRNQ 106 >UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERZ6_9FIRM Length = 164 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 67/104 (64%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++Q +++ + +I+ H+++ + +D +AK+ YSK+Y+ R+F T T+ YI+ RRL Sbjct: 19 MTNQTVVEKIADYIENHLEEDIPLDKIAKELNYSKFYIARVFADNTGHTIYKYIQGRRLT 78 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LAA +L T++PI +IA + Y SQQ F+ F + + TP YR Sbjct: 79 LAARKLAETDKPIVEIAYEARYGSQQAFTLAFSQFYLCTPQTYR 122 >UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=Bacillales RepID=C6CRY2_PAESJ Length = 301 Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 69/100 (69%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ I +I+ HI + L++ +A+ + S ++ R+F+++ +T+ +Y+R+RRL ++A ++ Sbjct: 9 IQQTIDYIEAHISEELSLSRLAQVAKLSDFHFHRVFQSMAGETVMEYVRKRRLAISAYQV 68 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 ++ + DIA+D G+ + +TF+R F+R F+ TP++YR R Sbjct: 69 ANSDAKLIDIALDTGFQNHETFTRAFKRMFEMTPAEYRKR 108 >UniRef50_B7GST4 Transcription activator, effector binding n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GST4_BIFLI Length = 286 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 66/98 (67%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ I +I+ H+++ + ++ V++++GYS +Y+ R+F +V +++G YI +RRL A+ +L Sbjct: 7 LERAITYIEAHLNEYIGLNEVSRETGYSYYYMTRLFSSVLGESVGHYINRRRLYNASEKL 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +++ + DIA+D GY S + FSR F+ F +P YR Sbjct: 67 IHSDQKVIDIALDCGYESSEAFSRAFKAVFGYSPVAYR 104 >UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSU9_9VIBR Length = 310 Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 66/98 (67%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++++I +HI +PL++D +A++S +S+W LQR+F+T T + Y+R+ +L AA L Sbjct: 17 ISKVLSFIHQHISEPLSLDDIARQSCWSRWQLQRVFQTETGMAVATYVRELKLSQAAERL 76 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T + DIA++LG+ S+ +FSR F++ F +P YR Sbjct: 77 IDTSDRVIDIALELGFSSEISFSRSFKQVFGLSPRAYR 114 >UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUU7_DESHD Length = 129 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 67/104 (64%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++ + D + +I+E++D ++++ +A+K+ SK+Y R+F VT +++ YI +RR+ Sbjct: 1 MDYRAKVYDSLDYIEENLDDRIDLEDLAQKAYLSKYYYHRLFHKVTGESVTRYITRRRMA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA EL TE+PI DIA+ Y SQ++F+R F R + P YR Sbjct: 61 KAAEELVETEQPIIDIALKYQYASQESFTRAFMRIYGLAPGKYR 104 >UniRef50_C1FTY8 Transcriptional regulator, AraC family n=16 Tax=Firmicutes RepID=C1FTY8_CLOBJ Length = 321 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 4/107 (3%) Query: 4 QKIIQDLIAWIDEHI----DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 QK IQ ++ ID+ I D+ L + ++++ GYS++Y R F+ ++ DY+R R+L Sbjct: 5 QKQIQIIVDEIDKCIKNYNDEALTLRFLSRRLGYSEFYTTRKFKEISGMQFRDYLRHRKL 64 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A E+R +E+ I DIA D G+ S + F+R F+R + TPS+YR + Sbjct: 65 AFALKEVRDSEKSILDIAFDYGFSSHEAFTRAFKRTYGVTPSEYRKK 111 >UniRef50_C8QF79 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QF79_9ENTR Length = 109 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 63/101 (62%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++II+DL WID ++ +I+ VA +SGYS+W++Q MF+ V ++ Y+RQRRL AA Sbjct: 5 EQIIEDLTHWIDLNLHAVHSIEDVAARSGYSRWHIQHMFKQVNRVSILAYVRQRRLERAA 64 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +L + I IA+ G+ SQQ FSR F + PS +R Sbjct: 65 KDLTEGQESISAIALRHGFGSQQAFSRAFIKWQKMKPSTFR 105 >UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B8K3P3_VIBPA Length = 306 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 64/98 (65%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++ +I H+D PL++D +A +S +S+W LQR+F+ T T+ +Y+RQ +L LAA L Sbjct: 14 ISKVLGFIHRHLDTPLSLDEIAAQSCWSRWQLQRVFQAETGLTVANYVRQLKLSLAAELL 73 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T++ + DIA+ G+ S+ FSR F++ F +P YR Sbjct: 74 LDTDQRVIDIALATGFNSEIAFSRAFKQFFACSPRVYR 111 >UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=Bacillus cereus group RepID=B7JL95_BACC0 Length = 299 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 62/102 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++++I+ I +I+ H+ + L + VA S S ++ R+F+ ++ DYIR+RRL A Sbjct: 5 YKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTHA 64 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L +TER + DIAM G+ SQ+ F+R F+R F P YR Sbjct: 65 AQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYR 106 >UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KJQ6_CLOPH Length = 265 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 59/105 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M QK + I +I++++ +N+ A G S W QR+F +TH L +YIRQR+L Sbjct: 1 MDWQKGMNSAIDYIEKNLTGNVNVRTAAGFVGCSTWEFQRIFSFLTHIPLSEYIRQRKLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA E++ + I DIA+ GY S FSR F + F PS R+ Sbjct: 61 LAAQEIKDNDVKIIDIALKYGYESPAAFSRAFNKLFGIAPSSVRN 105 >UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368D7 Length = 320 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 65/104 (62%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I ++ +++EH+ + +N + +A+ +G S +Y QR+F+ +T + + +Y++ RRL Sbjct: 1 MHAWEAIDGVLDFMEEHLREEMNTEALAQSAGLSPFYFQRLFKRLTGRPVLEYVKMRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LAA L E+ I DIA+D G+ S +F+R F+ + +P YR Sbjct: 61 LAASALEDREKRILDIAVDYGFSSHASFTRAFKEAYGISPEKYR 104 >UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9U5_9CLOT Length = 142 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 63/101 (62%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I++ +I +I+ +++ L+++ +A +GYS+++L R+F T T+ Y++ RRL AA + Sbjct: 7 IVRQVITYIESNLEGDLDLEKIAASAGYSRFHLNRIFAGETGCTIYKYLQARRLTSAAEK 66 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T PI IA + GY SQQ FS F+R + +P YR R Sbjct: 67 LAKTHTPIAQIACESGYSSQQAFSLAFKRAYLCSPKVYRDR 107 >UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EC6 Length = 292 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 64/106 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + IQ+ I +I+ +I + L+ + +A ++ S +Y Q++F + TLG+YIR RRL Sbjct: 1 MNWAEGIQNAINYIENNITEELDNNSIAAQACCSSYYFQKIFSLLCDMTLGEYIRNRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LA EL +T+ + DIAM GY + ++F+R F +PS+ R Sbjct: 61 LAGSELISTDIKVIDIAMKYGYSTPESFTRAFTLFHGVSPSEARKN 106 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 L +I+ H + L++D +A ++G+SK++ R+F+ +T T +Y+ RRLL A L Sbjct: 186 LCNYINAHCTEDLSLDELANEAGFSKYHFARLFKEITGTTCHNYLLGRRLLFAKTLLADF 245 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 PI ++AM G+ S TF+R+F+ Q TPS++R Sbjct: 246 SLPITEVAMRSGFNSLATFNRIFKFQIGCTPSEFR 280 >UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WGK8_BACSK Length = 280 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 61/96 (63%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 D I +I+ H+D L +D +A + S+++ QRMFR +T + +YIR RR+ +AA EL Sbjct: 3 DSIEYIENHLDNELLLDEIAAVACMSRFHFQRMFRMLTGYAVSEYIRNRRITVAAQELVH 62 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 ++ + D+AM GY S ++F++ FRR +PSD + Sbjct: 63 SKSKVIDVAMKYGYESPESFTKAFRRIHGISPSDAK 98 >UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK7_9BACL Length = 304 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 65/104 (62%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +Q+ + + +ID H+ LN+D +A+ S +SK++ R+F +VT +T YI ++RL A Sbjct: 4 YQERVDQVCKYIDAHLHHKLNLDQLAELSHFSKYHFSRIFASVTGETPFAYITKQRLARA 63 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR T + + +IA+ G+ S +F+ F++ F RTP++ R + Sbjct: 64 AAYLRETNQSVLEIALGCGFESASSFNAAFKKHFGRTPTEMREQ 107 >UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7JZZ4_VIBSE Length = 310 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 62/98 (63%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++ +I ++D L++D ++K S +S+W LQR+F+ T ++ YIR+ +L LAA L Sbjct: 14 IHSVLDYIHNNLDIALSVDEISKASCWSRWQLQRVFQQHTGVSVAHYIRELKLSLAAERL 73 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T DIA+++G+ S+ FSR F+ F ++P DYR Sbjct: 74 IHTSDRSLDIAIEMGFASEHAFSRAFKNMFSKSPRDYR 111 >UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6N3_9CLOT Length = 288 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 64/104 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I+ + +I+ ++ + +++ +AK++GYS ++ R+F+ + ++ DY+R+RR Sbjct: 4 MCYINSIKKALNYIENNLQEDIDLSAIAKEAGYSLYHFHRIFKGIVGDSMKDYVRKRRFT 63 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA EL T + I +I + GY S++ FSR F + + R PS+ R Sbjct: 64 EAAKELVYTNKSIVEIGIKYGYESREGFSRAFEKVYGRNPSEVR 107 >UniRef50_D0YAG4 Transcriptional regulator, AraC family n=6 Tax=Klebsiella RepID=D0YAG4_KLEVA Length = 299 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 63/101 (62%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q + ++AW++++I +ID +A+ GYS+ ++ +F +G YIR RRL +AA Sbjct: 3 QMLYLKMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAA 62 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 V LR T +PI IA L Y S QTFSR F+++F +P +YR Sbjct: 63 VSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYR 103 >UniRef50_A6M032 Transcription activator, effector binding n=19 Tax=Bacteria RepID=A6M032_CLOB8 Length = 285 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 61/98 (62%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I + I++I+E+I + + I +A+K+ S +Y Q+ F + T+G+YIRQRRL LA +L Sbjct: 7 IGEAISYIEENITEEITIKNIAEKTFMSPFYFQKGFAMLCGFTVGEYIRQRRLTLAGSDL 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +T+ I DIA+ GY S +F++ F R TP+ R Sbjct: 67 VSTDEKIIDIALKYGYASPDSFTKAFTRFHGVTPTAVR 104 >UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0CY04_9CLOT Length = 295 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 65/102 (63%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ I +I+ H+D+ +++ V+++ GYS +++ R+F V + +G YI +RRL A Sbjct: 10 HLTPLERAIEYIETHLDENIDLGDVSREMGYSYYHMTRLFSAVLGEPVGRYISRRRLYRA 69 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +L ++R I DIA++ G+ S + FSR F+ F TP+ YR Sbjct: 70 AQQLVHSDRRIIDIALESGFQSPEAFSRAFKALFKTTPAGYR 111 >UniRef50_A9MRK1 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MRK1_SALAR Length = 286 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 1 MSHQK-IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 MS++K I+Q + WI++HI++ ID + +GYS+ +Q MF+ +G Y+RQR++ Sbjct: 1 MSYEKKIVQHFVRWIEDHIEEDKTIDDLVNYTGYSRRAVQLMFKKEYGVPVGTYMRQRKM 60 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA LR T+ + +IA + + Q F R F+ F+ TP++YR+ Sbjct: 61 CRAATLLRLTKLSVIEIAHRVHFSGTQNFGRAFKHAFNMTPTEYRN 106 >UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D8X3_9VIBR Length = 295 Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 67/102 (65%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ ++ +I +++D+PL + +A S +S+W LQR+F+ T+ L Y+R+++L A Sbjct: 9 HLNRVEKIVDYIHQNLDKPLTVTELADISCWSRWQLQRVFQEQTNHNLAQYVREQKLSRA 68 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +L +++ + DIA+D G+ S+ +FSR F++ F +P YR Sbjct: 69 AEQLLKSDQKVTDIALDFGFNSEVSFSRAFKQLFAISPRQYR 110 >UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYZ8_CLOB8 Length = 290 Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 65/106 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++II I +I+ ++ +PL ++ VA YS ++ R F+ V +T+G YIR RRL Sbjct: 1 MKDKQIIGRAIIFIETNLYEPLTVESVASAVSYSYYHFHRYFQVVMGETIGSYIRSRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L +++ I DIA+ L + S ++F+R F++++ TP +YR Sbjct: 61 QAAYNLVHSKKRILDIAILLYFESAESFTRAFKKRYGITPMEYREN 106 >UniRef50_B7LRE5 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LRE5_ESCF3 Length = 266 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 61/96 (63%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 ++ AWI+++I+ P+N++ + K SGYS+ +L +F T ++ +Y+R +RL A L+ Sbjct: 3 NIFAWINKNIESPINVEDLVKISGYSRRHLHTLFMQYTGHSVAEYVRLKRLSYTAHLLKL 62 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T + DI++ Y S Q+FSRVF+R + TP YR Sbjct: 63 TNLSVLDISLRYHYDSPQSFSRVFKRYYQMTPLAYR 98 >UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BTE5_9BACI Length = 303 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 65/103 (63%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 +I+ ++ +I ++ + L++ VVAKK+G S ++ RMF+ V +TL Y+ + +L AA Sbjct: 21 EIVIPILVYIQANLHEDLDLKVVAKKAGLSPFHFHRMFKNVVGETLKQYVLRIKLEKAAF 80 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ + I I+ +LG+ + ++F+R F+R+F TP DYR + Sbjct: 81 ALKYWDEKILSISNELGFKNPESFTRAFKREFQYTPKDYRQQF 123 >UniRef50_A4BA46 Transcriptional regulator, AraC family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BA46_9GAMM Length = 293 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 60/100 (60%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + L+ +I HI +P+++D +A +S +S+W LQR+F T T+ Y+R+ +L LAA L Sbjct: 10 LDQLLDYIHRHIHEPMSLDTLAAQSAWSRWQLQRVFVAYTGYTVAQYVRELKLSLAADCL 69 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + DIA+ G+ S+ FSR F++ F +P YR R Sbjct: 70 LENSDRVLDIALSFGFGSEVAFSRAFKQFFKVSPHQYRKR 109 >UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Tax=Klebsiella RepID=A6TGX0_KLEP7 Length = 122 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q ++ DL+ WID ++D+ L +D ++ SGYS W+L R+FR ++ +YIRQ+R+ L Sbjct: 14 QSVLSDLLLWIDNNLDKKLTVDDLSDISGYSPWHLFRLFRHYFDRSPMEYIRQQRMSLCC 73 Query: 64 VELRTTER-PIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L TT I DI M +GY F+R F++ TP+ YR++ Sbjct: 74 RLLLTTPGYRIVDICMMVGYDDLSAFNRTFKKYHALTPTQYRYQ 117 >UniRef50_UPI0001789CA8 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789CA8 Length = 125 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 65/101 (64%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +++Q ++ W++ ++ + ++ ++++ GYS +Y R F +T TL DY+ RR+ AA Sbjct: 5 NEMVQHMVDWVEANLTESSSLLKMSEQFGYSPYYCSRQFNQLTGMTLRDYVWTRRISRAA 64 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +ELR T++ + DIA+ G+ SQ+ F+R F + F +P+ Y+ Sbjct: 65 LELRDTDQRVLDIAVKYGFSSQEAFTRAFTKAFQLSPAAYQ 105 >UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMZ0_9PLAN Length = 286 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 56/91 (61%) Query: 14 IDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPI 73 I H+D+ L+++ +A + YS + R+FR + ++ DY+R+ R+ AA LR R + Sbjct: 19 IQHHLDEDLSLEHLAAAADYSPCHFHRIFRGIVGESADDYVRRLRMERAAQSLRYRRRSV 78 Query: 74 FDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 DIA+D GY S + F+R F R F TPSDY+ Sbjct: 79 LDIALDAGYGSHEAFTRAFVRTFGVTPSDYQ 109 >UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=Firmicutes RepID=B7HW35_BACC7 Length = 281 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 64/100 (64%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + + + +I+ +D+ ++ +AK + S+++ RMF +++ +L +YIR+RRL LAA E+ Sbjct: 7 MNNALEYIENSLDEDIDYKKIAKAASCSEFHFSRMFSSISGVSLSEYIRRRRLTLAAFEI 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + + I D+A+ GYVS FSR F++ TPS+ R++ Sbjct: 67 QKGDIRIIDVAIKYGYVSSDAFSRAFKKMHGITPSNARNK 106 >UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Marinomonas RepID=A6VR73_MARMS Length = 306 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 65/100 (65%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ ++ +I E++D+ +++ +A+KS +S+W QR+F T ++ YIR+ RL AA L Sbjct: 10 IEKVLDYIHENLDESIHVSSLAEKSCWSRWQFQRVFGQATGLSVAQYIRELRLSKAAELL 69 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +++ DIA+ G+ S+ +FSR F++ F+ TP DYR R Sbjct: 70 LSSKNRHVDIAIQCGFDSEISFSRAFKQMFNCTPRDYRQR 109 >UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Clostridium RepID=A6M0I1_CLOB8 Length = 127 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 67/104 (64%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+++ I+ I +I+ ++++ + + +A K+ SK++ R+F +V + + +YIR++RL Sbjct: 1 MNYEACIKKSIEYIENNLNKKIQLKELADKAFLSKYHFHRVFHSVVGEPVAEYIRKKRLE 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA EL TTE I DIA+ + +Q++F++ F++ + P ++R Sbjct: 61 EAANELLTTENKIIDIALKYQFSNQESFTKAFKKLYGIPPKEFR 104 >UniRef50_B0SDP4 Transcriptional regulator, AraC family n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDP4_LEPBA Length = 289 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 59/93 (63%) Query: 14 IDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPI 73 I+E +++ + ++ +A +GYS W+ R F++V + + YI++ RL AA EL+ + PI Sbjct: 17 IEEQLEKEIGLNQIAFLTGYSDWHFHRFFKSVQKENIKTYIKRLRLEKAAYELKISNFPI 76 Query: 74 FDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +I M+ G+ S + F++ F+R TPS++R + Sbjct: 77 LEIGMEAGFSSHEAFTKAFKRVIGITPSEFRKK 109 >UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 Tax=Bacillaceae RepID=B1HRP5_LYSSC Length = 287 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MS + IQ I ++++H+ + + I+ +A++ S ++ QR F +T ++ DY+R+RRL Sbjct: 1 MSWIESIQKAINFMEDHLLENITIEQIAQEVNSSVFHFQRTFAILTDMSIADYLRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA EL T++ I D+A GY + + F++ FR+Q TPS+ R R Sbjct: 61 LAAQELMDTDQKIIDLAYKYGYETPEAFTKAFRKQHYVTPSEARKR 106 >UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CLS6_SHEPW Length = 303 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 67/100 (67%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ ++ +I H+DQPL+++ +A+ S S+W LQR+F+ T + Y+R+ +L +AA ++ Sbjct: 10 IERVLNFIHTHLDQPLSLEDIAEHSQCSRWQLQRIFQQQTGLNVAQYVRELKLSIAADKV 69 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + + + DIA +LG+ S+ +FSR F++ F +P +Y+ R Sbjct: 70 LSGQSRMLDIAYELGFNSEVSFSRSFKQLFGVSPREYQRR 109 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 66/103 (64%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S++ IQ I +I+E + + + +A+ +G+S+ + R+F+ + T+ +Y+R+RRL Sbjct: 3 SYETQIQRSIDYIEEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLAR 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA +L T+ I DIA + G+ S +TF+R F++ F TPS+YR Sbjct: 63 AAYQLSHTDEKIIDIAFEHGFQSHETFTRAFKKLFQMTPSEYR 105 >UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5D7_BREBN Length = 285 Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 64/104 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++ + I +++I++ + + + +D VA +GYSK++ QR+F VT +T+G YI +RRL Sbjct: 1 MNYMEQITYALSFIEKQLTEKVTLDEVASAAGYSKYHFQRLFFHVTGETVGQYISKRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA L ++ + ++A G+ S + F+R F ++F PS R Sbjct: 61 EAAKALSLEQKSVTEVAFTYGFDSHEAFTRAFTKRFGLPPSALR 104 >UniRef50_C6LAX2 Regulatory protein SoxS n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAX2_9FIRM Length = 167 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 D++ +I H + +++ VA + G K+ L R+F V + DY+ RL A L + Sbjct: 52 DILTYIANHYREDISLSSVAAQFGTGKFVLSRIFSNVLGVSFTDYVNSLRLSHAQHLLAS 111 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T+R I DIA++ GY +QQTF+RVF+ +F TP ++R Sbjct: 112 TDRNILDIALECGYHNQQTFNRVFKARFSCTPKEFR 147 >UniRef50_C6MNU8 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. M18 RepID=C6MNU8_9DELT Length = 262 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 59/105 (56%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H I+D+ AWID + +Q +N+D +A + G S+ L R FR ++ Y+ RRL A Sbjct: 148 HSDKIRDICAWIDANSNQSVNLDALALRFGMSRSLLTREFRKYAGTSIVSYVNSRRLQNA 207 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L + + I ++++D G+VS F + F+ + TP+++R L Sbjct: 208 GTALMSPGKSILEVSLDFGFVSLANFYKQFKSLYGMTPAEFRSHL 252 >UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FWZ8_9DELT Length = 318 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 2/106 (1%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNI--DVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRR 58 + H+KI + + + ++ P N+ D +A+ +G SK++ R F V T G Y+R R Sbjct: 208 VGHRKIARSVEYIRNLEVEGPSNVTLDDLAQVAGLSKYHFLRQFSQVVGMTPGAYLRTLR 267 Query: 59 LLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L AA +LRTT+ PI ++A+ +G+ +FSR F R TPS+Y+ Sbjct: 268 LCHAARKLRTTDLPILEVALSVGFADHPSFSRAFARHMGMTPSEYQ 313 >UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=Clostridium RepID=A7FVD8_CLOB1 Length = 294 Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 63/96 (65%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ + + +I+ ++ +NID ++K + S+++ QR+F ++T T+ YI+ RRL LAA E Sbjct: 6 LLNNTLEYIERNLHTAINIDDISKVACSSRYHFQRVFHSLTGFTVTQYIKNRRLTLAAEE 65 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 L +T+R I DIA+ GY S + F++ F+R +PS Sbjct: 66 LVSTDRRIIDIALKYGYESPEAFTKAFKRLHGISPS 101 >UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteria RepID=A8FZF8_SHESH Length = 300 Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 66/99 (66%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I +++++ +QPLN+ VA K+ S ++ R+F+ VT++TL +Y+R+ RL A +L Sbjct: 9 LKPVIRYLEQNFNQPLNLPEVAAKANISPYHFHRIFKAVTNETLAEYLRRLRLERIATDL 68 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + I ++A++ G+ S Q+ ++ F+++F TPS+ R Sbjct: 69 FYKQVSITELALENGFSSSQSLAKAFKQRFGLTPSELRE 107 >UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSN9_9VIBR Length = 284 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 59/94 (62%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 I +I++H+ +++ +A S YS ++ R+F+ + T +Y+R+RRL +AA L T E Sbjct: 8 IEYIEQHLYDKISVHQIAAASHYSTYHYSRVFKALVGDTPKEYLRKRRLTMAAKRLLTEE 67 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 I D+AMD + SQ+ F+R F+ F+ TP+ YR Sbjct: 68 VGILDLAMDCQFDSQEAFTRAFKALFNMTPAQYR 101 >UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RP62_CLOCL Length = 292 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 63/99 (63%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 +Q+ I +++++I + +N D +A+ + S ++ QRMF +T T+G+YIR RRL LAA EL Sbjct: 7 MQNAINYMEDNILEEINYDKIAQCAYSSTYHFQRMFSMLTGFTVGEYIRNRRLTLAAQEL 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 ++ I DIA+ GY + + F++ F+R TP+ R Sbjct: 67 SFSKERITDIAIKYGYGTSEAFTKAFQRFHGITPTAARE 105 >UniRef50_Q12PA0 Transcriptional regulator, AraC family n=1 Tax=Shewanella denitrificans OS217 RepID=Q12PA0_SHEDO Length = 209 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 60/98 (61%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 KII + +I +H DQ +++D +A SG+SK++ R+F T LG++I++ +L A Sbjct: 11 KIISQVGQYIYDHSDQTISLDALASYSGFSKYHFNRIFFAATGYQLGEFIQRHKLDKALQ 70 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD 102 ++ I D+A+ +GY S +FSR F++ F TPS+ Sbjct: 71 LIKQGNHNIIDVAISVGYDSPSSFSRAFKKNFSVTPSE 108 >UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN17_DESAA Length = 290 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 58/95 (61%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I +H+D P+ ++ +AK + +S ++ R+F +T + L +YIR+ L AA ELR + +P Sbjct: 18 FIQDHLDDPMTLEELAKVACFSPFHFHRIFTAMTGEPLKEYIRRLLLERAAHELRYSSQP 77 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + +A++ GY + + F+R FR F P YR L Sbjct: 78 VVQVALNAGYQTHEAFTRAFRNMFGVPPRQYRTEL 112 >UniRef50_C0BW87 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0BW87_9CLOT Length = 333 Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 34/101 (33%), Positives = 60/101 (59%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q I+ ++ + I + + L + ++++ GYS++Y R F+ + DY+R R+L A Sbjct: 9 QMIVDEIDSCIKNYNGEDLTLRFLSRRLGYSEFYTTRKFKEILGIQFRDYLRLRKLAFAL 68 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 E+R +E+ I DIA D G+ S + F+R F+ + TPS+YR Sbjct: 69 KEIRDSEKSILDIAFDYGFSSHEAFTRAFKGTYGVTPSEYR 109 >UniRef50_C6PRW6 Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRW6_9CLOT Length = 286 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 1/96 (1%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ LI +I+E++ L+++ ++K YS +Y QR+F TVT ++ DYI +RRL+ A E Sbjct: 7 VVNLLIEYIEENLQSDLSLESLSKLVNYSTYYTQRIFSTVTCMSIHDYITERRLIRAGEE 66 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 + + I D+A+ GY S F++ F+++F PS Sbjct: 67 ILNGGK-IIDVALKYGYSSHNGFTKAFKKKFGLLPS 101 >UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C357C1 Length = 307 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 66/101 (65%), Gaps = 1/101 (0%) Query: 7 IQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I +I +I+EH+ ++ ++++ +A YS+++L RMF +V L Y+ +RRL AA Sbjct: 26 IAAVIDYIEEHLMEEKMDLESIASIFHYSRYHLHRMFASVAGFPLHTYLTRRRLTEAARL 85 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+RP+ +IA+ GY +Q++FSR F++ F +PS YR + Sbjct: 86 LVWTDRPVLEIALASGYETQRSFSRAFQKYFQHSPSRYRKK 126 >UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V01_DESDG Length = 308 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 58/98 (59%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I I W++EH+++ +++D +A ++ +S ++ R+FR V +++ YIR+ RL A L Sbjct: 24 IMRAILWLEEHMNEAVSLDDMAAQAHFSPYHFHRIFRGVAGESVMAYIRRLRLEKAVHRL 83 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + DIA D GY + + FSR FR QF +PS R Sbjct: 84 AYGSASVTDIAFDAGYEAHEAFSRAFRAQFGMSPSALR 121 >UniRef50_B0NCA1 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCA1_EUBSP Length = 274 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 60/105 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 S II ++++ H + + +D++A+ G SK+ L R+F H+ Y+ ++R+ Sbjct: 156 FSSGDIIYRTVSYVAAHFKEEITLDMMARDLGVSKYVLSRVFSATFHKNYNQYLNEQRMN 215 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L ++ PI DI +D G+ SQ+TF+RVF+ + +P +YR+ Sbjct: 216 YVISLLECSDEPITDICLDAGFQSQRTFNRVFQEMYKMSPREYRN 260 >UniRef50_UPI0001C3596C AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3596C Length = 304 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I H +PL++ ++ + GYS + RMFR TL DY++Q+RL AA E+R R Sbjct: 6 YIRLHAKEPLSVQGLSNRFGYSACHFSRMFRAEMGVTLMDYVKQQRLFGAAREIREG-RK 64 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 I D A+D GY + F+R FR QF +P+ Sbjct: 65 ILDAALDYGYETHSGFTRAFRAQFGYSPA 93 >UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepID=B7VRB4_VIBSL Length = 290 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 62/94 (65%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 +A+I ++ L+++ +A +S +S+W LQR+F+ T T+ +Y+R+ +L AA EL + Sbjct: 1 MAYIHANLSSALSLEDLATQSCWSRWQLQRVFQAETGLTVANYVRELKLSQAAEELLDGK 60 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + DIA+ LG+ S+ +FSR F++ F +PS YR Sbjct: 61 DRVIDIALGLGFNSEISFSRSFKQMFGVSPSQYR 94 >UniRef50_A9KPU7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KPU7_CLOPH Length = 294 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 66/106 (62%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 ++++K+I+D + I++++ L++D +AK+ G SK++ R+F+ +T L Y+R R+L Sbjct: 3 IANRKLIEDAVILIEDNLKTNLSLDEIAKQIGISKFHFHRIFKAITGSPLITYVRGRKLT 62 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + EL + I DIA D + +Q++ R F++ F TPS +R + Sbjct: 63 SSLNELLDDKLKIIDIAYDYNFEYEQSYERAFKQLFGLTPSAFRQK 108 >UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HZR5_LYSSC Length = 294 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 60/104 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + Q +I +I+E + + + ++ + +GYSK++L R+F+ T T+G+YIR RRL Sbjct: 1 MEYSQATQRIITYIEEQLMEEIELEFMPSITGYSKFHLSRIFKQETGLTIGEYIRMRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +AA L + I IA + SQ+ F+R F+ + P YR Sbjct: 61 VAASCLIYSNASIITIAFKFQFQSQEAFTRAFKEVYALPPGKYR 104 >UniRef50_A9IAC9 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IAC9_BORPD Length = 268 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 64/105 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H+ I+++++WI+ ++ + + I+ ++ + S+ L R FR T ++L Y RR+ A Sbjct: 158 HKAKIKEIMSWIEGNLTEHITIERISDQFAISRSLLTREFRGHTGKSLVGYCNGRRVQKA 217 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A+ L TTE P+ DIA+D G+ + F R F+ +F TP+ +R ++ Sbjct: 218 AIALATTEAPVIDIALDCGFSNISHFHRQFKSRFGITPAVFRRKI 262 >UniRef50_C4IAX6 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=C4IAX6_CLOBU Length = 437 Score = 72.4 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 64/103 (62%), Gaps = 1/103 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IIQ I +I+E++ LN +V+AK++ +S +Y R+F+++T + YI++R+LL Sbjct: 1 MENIDIIQKSIDYIEENLKNELNAEVLAKRAAFSVFYYYRVFQSMTGLPVMQYIQKRKLL 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A E+ RP+F + D GY + F + F+++F +P+ Y Sbjct: 61 HAIYEMEMG-RPMFIVEADYGYETHSGFYKAFKKEFGCSPTKY 102 >UniRef50_A6UD97 Transcription activator effector binding n=14 Tax=Proteobacteria RepID=A6UD97_SINMW Length = 279 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 57/98 (58%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I I +I+ H + +++D +A +G S+++L R+F +++ YIR RRL AA++L Sbjct: 4 IARAIWFIESHFAEDISLDDIAAAAGLSRYHLSRVFGLSAGRSISAYIRGRRLSGAALDL 63 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 I ++A++ GY S + F+R FR QF TP R Sbjct: 64 ANGTSGILEVALEAGYGSHEAFTRAFREQFGVTPESIR 101 >UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n=2 Tax=Rhodobacterales RepID=A3VBK3_9RHOB Length = 278 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 67/102 (65%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++K + ++ ++ +++D L++D +A + S+++ R+F VT + + +IR+ RL A Sbjct: 5 YEKRLLRVLDYVYDNLDGDLSLDTLADVAALSRFHFHRVFTAVTGEPVAHFIRRVRLHRA 64 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +EL +++ P+ ++A +GY + ++FSR FR F RTPS++R Sbjct: 65 GLELLSSDAPVAEVAAKMGYDNARSFSRSFRDAFGRTPSEFR 106 >UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35507 Length = 307 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 63/101 (62%), Gaps = 1/101 (0%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 L+++I++H +PL ++ +A +G+SK++ R+F+ T+ T DY+ ++R + AA L Sbjct: 197 FNSLLSYINDHFAEPLTLEKMADYTGFSKYHFTRLFKQHTNSTFYDYLSRKR-IQAAQTL 255 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 TT+ I IA G+ + +F+R F++ + +PS+YR + Sbjct: 256 LTTDASITSIAFQTGFNNSTSFTRCFKKYTNYSPSEYRTKF 296 >UniRef50_Q49JG3 LdaA n=9 Tax=Enterobacteriaceae RepID=Q49JG3_ECOLX Length = 309 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 1/99 (1%) Query: 7 IQDLIAWIDEHID-QPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I ++ +I+++I+ P++I+ + + SGYS+ YLQ +F +G YI++RR+ AAV Sbjct: 8 INAILDYIEDNIEISPIDINSLVEYSGYSRRYLQLLFFDYIGMPVGKYIQRRRVSRAAVL 67 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LR T P+ I+ L Y SQQTF+R F++ TP YR Sbjct: 68 LRLTNLPLVTISEKLCYDSQQTFTREFKKHTGNTPLQYR 106 >UniRef50_A1ZSG3 Transcriptional regulator, AraC type, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSG3_9SPHI Length = 292 Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 63/104 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H + ++ L+ ++ + +PL+ VA + YS + R+FR V H+++G YI++ L A Sbjct: 6 HIERLRSLLNLLENNFTKPLSSSEVAAATFYSYRNINRIFRAVFHKSIGRYIKELLLQEA 65 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A L +++ I DIA +L Y Q F++ FRR+FD +PS +R + Sbjct: 66 ARRLAYSDKAITDIAFELNYSDLQAFNKAFRREFDCSPSQFRQQ 109 >UniRef50_C1FNH9 Transcriptional regulator, AraC family n=11 Tax=Clostridiaceae RepID=C1FNH9_CLOBJ Length = 129 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 59/102 (57%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 K I++++ WI+++I + + ++ GYS +Y F T YI +RRL LAA+ Sbjct: 4 KTIENMVNWIEDNIMRNPTLTEMSNYVGYSPFYCSSKFHENIGITFKQYISKRRLSLAAI 63 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +++ T+ DIA+ G+ SQ+ F+R F + TP++YR + Sbjct: 64 KVKDTKVRFLDIALKYGFSSQEAFTRAFVSNYGCTPNEYRKK 105 >UniRef50_A5Z7H2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7H2_9FIRM Length = 292 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 63/96 (65%), Gaps = 1/96 (1%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ ++ +I+EH+++ LNI +A+ +GYS+++ RMF+ T++T+ +Y+ +RRL+ A + Sbjct: 2 VMNHVLKYIEEHLEESLNIKRLAEIAGYSEYHFIRMFKRYTNETVMEYVCRRRLIRACED 61 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 + R I D+A+ G+ S FS+ F R+F PS Sbjct: 62 ILLGMR-IIDVAIKYGWQSHSAFSKSFNREFGFPPS 96 >UniRef50_UPI0001973804 AraC-family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973804 Length = 329 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 60/99 (60%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I+ + + +I+E++D L++ VA SK++L R F T+ DY+R+R+L AA Sbjct: 51 IVSEALFYIEENLDSRLDLQTVASALHCSKYHLHRSFAKTAGLTIHDYVRRRQLTEAARL 110 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L +++P+ +IA+ GY SQQ F+ F+ + TP +YR Sbjct: 111 LVFSKKPVIEIALMSGYESQQAFAGSFKSMYKMTPGEYR 149 >UniRef50_B6FT88 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT88_9CLOT Length = 293 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 59/99 (59%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I +A++ H + L + VA+ G +K+ L ++F + H Y+ + RL A Sbjct: 177 LIYAAMAYLLSHFQEELTLGKVAEALGINKYTLSKIFSGIFHTNFNQYLNEIRLNYATSL 236 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L TE I DI ++ G+ SQ+TF+R F+++++RTPS+YR Sbjct: 237 LENTEMRITDIYLEAGFESQRTFNRTFQQRYNRTPSEYR 275 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 58/98 (59%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 +++ +ID H + L +D +A SG+SK++ R+F+ T T DY+ RR+ A L Sbjct: 204 FNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAAEELL 263 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 E I +IA+ G+ S TF+R+F+++ TPS+YR Sbjct: 264 ANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYR 301 >UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EE80 Length = 285 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 59/98 (60%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + + I +I+ +I + ++ AK + S ++ QRMF +T TL +YIR+RRL LAA EL Sbjct: 7 MNEAIGYIEANITEEIDYAEAAKVACCSAYHFQRMFPFITDVTLSEYIRRRRLTLAAYEL 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + ++ + D+A+ GY S + F+R F+ TP+ R Sbjct: 67 QNSDIKVIDLALKYGYDSPEAFARAFQNMHGTTPTAAR 104 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 61/98 (62%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+++I +I++H + L I+ +++ GYSK + +F+ T + ++I Q RL A EL Sbjct: 204 IREIIDYINQHYAENLTIEKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEEL 263 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 R + +P+ +IA +G+ + F+R F+ +D+TPS YR Sbjct: 264 RNSVKPVLEIATTVGFNNLSNFNRQFKHYYDQTPSQYR 301 >UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=Q18D16_CLOD6 Length = 303 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 62/98 (63%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ + I+ ++ + ++I+ +A K+ S +Y QR+F+ + ++T+ +YI+ RRL A+ L Sbjct: 7 IQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLARASEYL 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + I D+A++ G+ S +TF+R F++ + TP YR Sbjct: 67 AEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEKYR 104 >UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobacteria RepID=A0KJN2_AERHH Length = 325 Score = 71.6 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 63/100 (63%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ ++ +I ++D PL + +A++S +S+W LQR+F T T+ Y+R+ +L AA L Sbjct: 47 IERVLDYIHANLDLPLGLAELAEQSCWSRWQLQRVFLHETGLTVAHYVRELKLSQAAEAL 106 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + + + D+A+ G+ S+ +FSR F++QF +P YR R Sbjct: 107 LSGRQRVLDLALCYGFGSEVSFSRAFKQQFGCSPLAYRKR 146 >UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z0_9CLOT Length = 334 Score = 71.2 bits (173), Expect = 9e-12, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 58/105 (55%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 QK+I +I +I+ H + + +A+ SG + Y+ F+ T DY+ ++RL A Sbjct: 188 QQKLIHTMIKYINHHFRDKVTLSQLAELSGMNLCYVSTFFKAHTGVGFQDYLTRKRLAYA 247 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A ++ TE I DIAMD G+ + F++ FR+ F+ +P YR L Sbjct: 248 AYQINNTEDSIVDIAMDSGFPDVKAFNQAFRKYFNLSPGQYRSEL 292 >UniRef50_B8I4L9 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I4L9_CLOCE Length = 452 Score = 71.2 bits (173), Expect = 9e-12, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 64/106 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++ + IQ I +I+ +++ +NID A+ + S RMF +T ++ +YIR RR+ Sbjct: 1 MNYYERIQKSIDYIESNVENKINIDFAAQTAFMSLSNFYRMFFALTGYSVKEYIRLRRIS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA++++ T+ + DIA+ + S +FSR F+R PSDYR + Sbjct: 61 LAAIDIQGTDTCLIDIAIKFDFESGDSFSRAFKRITGFLPSDYRKK 106 >UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KRM0_CLOPH Length = 296 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 58/91 (63%) Query: 14 IDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPI 73 I+EH +P+N+D +A+ +G+SK++ R+F+ + + DY+ ++R++ A L I Sbjct: 191 INEHCTEPINVDDLAQLAGFSKYHFMRLFKEFSGISYYDYLNKQRIMHAEKLLIDPNLTI 250 Query: 74 FDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +IAM G+ S TF+R+F+ Q TPS+Y+ Sbjct: 251 TEIAMHSGFNSLATFNRIFKEQKQCTPSEYK 281 >UniRef50_UPI0001789679 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789679 Length = 289 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 57/104 (54%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+H +II+ + I+E+++QPL++ VA SK+Y R+F + +L YI RRL Sbjct: 1 MNHHRIIEQALIHIEENLEQPLSVSSVALTFNMSKYYFHRLFSAMMGCSLNQYILSRRLN 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A + + DIA L + +Q +F+R F++ + PS R Sbjct: 61 AALSLIHNNNLSLTDIAYQLAFGTQASFTRAFKQHYGVAPSSLR 104 >UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUD7_9FIRM Length = 286 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 62/106 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + + ++I+ + +I+++I PL + +A+ S YL ++ VT + + DYI++RR+ Sbjct: 173 LEYHEVIKKVENYINQNISGPLPLKDIAQHVFMSSAYLSTTYKNVTGRNITDYIQERRVS 232 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +RTT I DIA + G+ F++VF+++ TP +YR R Sbjct: 233 AACFLIRTTSGSISDIAQETGFSDANYFTKVFKKKTGMTPREYRQR 278 >UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y7_9GAMM Length = 297 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 57/98 (58%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ L+ I+ ++ +N+ +A S W+ QR F+++ TLG YIR RRL AA L Sbjct: 8 IQTLVDRIEANLADDVNVLGLADAFHMSPWHFQRTFKSLIGDTLGGYIRGRRLTRAAQLL 67 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + R + DIA+ +G+ S + FSR F+ F+ TP +R Sbjct: 68 LESRRSVIDIAVSVGFNSHEAFSRSFKAYFNVTPKAFR 105 >UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDH7_9BURK Length = 319 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 60/93 (64%), Gaps = 1/93 (1%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTER- 71 +ID H+D +++ +A + +S ++ R+F TLGDY+R+RRL +AA++L R Sbjct: 24 YIDSHLDGDIDLAALADVAHFSPFHFHRLFAAWMGATLGDYVRRRRLEVAALQLAGNTRI 83 Query: 72 PIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + ++A+ +G+ S + F+R F+ +F ++PS +R Sbjct: 84 SVLEVALGVGFGSGEAFARAFKLRFGQSPSAWR 116 >UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHL6_9CLOT Length = 290 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 58/98 (59%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + + I ++++++ ++ D VA+K+ S ++ QRMF +T L +YIR+RRL LAA EL Sbjct: 7 MNEAICYVEDNLAGEIDFDEVARKACCSTYHFQRMFSFITEVPLSEYIRRRRLTLAAFEL 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + + + ++A GY S F+R F+ TP+ R Sbjct: 67 QNSSVKVIELAFKYGYESPDAFTRAFQNLHGVTPTSAR 104 >UniRef50_UPI0001745354 AraC family transcriptional regulatory protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745354 Length = 293 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 57/94 (60%) Query: 14 IDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPI 73 ++ ++ P + ++A++ G +YL R+F + +T+ + +RQRR+ LAA L T+ I Sbjct: 196 LERDLENPPTLQMLAREVGCGPFYLSRLFASQMGRTIPELLRQRRMELAAKLLSTSRESI 255 Query: 74 FDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +IA+ +GY S F+R F R+F TPS YR R Sbjct: 256 SNIALRVGYESFSAFTRGFVREFGVTPSGYRKRC 289 >UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID=A8FAK9_BACP2 Length = 290 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 64/104 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + IQ I +I+E++ ++I ++ KS +S ++ QR+F+ +T ++ +YIR RRL Sbjct: 1 MDYYERIQHSIEFIEENLQNNISIKEISSKSCFSAFHFQRLFQAITGFSVQEYIRNRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA L+ T++ + IA+ Y SQ+ F+R F + F TP +R Sbjct: 61 EAARLLKETKQNVLHIAIAFQYGSQEAFTRAFVQFFGVTPGRFR 104 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 60/102 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +Q+L+ +I+ H + +++D +AK G+SK+YL R+F DYI + R+ A Sbjct: 159 YNSTMQNLLKYIEIHYHEKISLDSIAKDLGFSKFYLSRIFSNKIGYQFNDYINRLRINKA 218 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L T+ P+ IA++ G+ SQ+ F+R+F+ TP+ +R Sbjct: 219 QKLLSETDLPVTIIALECGFESQRNFNRIFKELTALTPTKFR 260 >UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N339_9FIRM Length = 211 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I + + +I+EH+ + + I VA ++ S +Y Q+ FR + ++ +YIR RRL LA E+ Sbjct: 7 ISNALKYIEEHLKEDIKIVDVANEAYVSSFYFQKAFRILCGFSVAEYIRYRRLSLAGSEV 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 TT + I +IA++ GY S +F++ F R TP+ Sbjct: 67 ITTNKKIIEIALEYGYDSPDSFTKAFTRFHGVTPT 101 >UniRef50_C5BA25 DNA-binding transcriptional dual regulator n=2 Tax=Edwardsiella RepID=C5BA25_EDWI9 Length = 119 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 51/92 (55%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 WI H+ + V SGYS+ Y R F TL +YIR RL L+ +L TE Sbjct: 17 WIANHVHLGIKSADVIAISGYSRSYFLREFELAMGTTLANYIRLERLKLSLQQLEETELR 76 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 I +I+ LGY SQ TF ++F+ Q+ +PS+YR Sbjct: 77 IKEISHALGYPSQSTFCQIFKNQYRVSPSEYR 108 >UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTK0_9PROT Length = 330 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 64/95 (67%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 ++ I ++D+ +++D +A + +S+++ R+FR +T +T+G+++R+ +L AA +LR T Sbjct: 45 VLVHIQRNLDRAMSLDELADVAAFSRFHFARIFRAMTGETVGEHVRRLKLERAAGKLRHT 104 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + + +IA+D G+ + + FSR F+ QF PS +R Sbjct: 105 RQTVTEIALDAGFDTPEAFSRTFKAQFGDPPSRFR 139 >UniRef50_A0AHP4 Complete genome n=16 Tax=Listeria RepID=A0AHP4_LISW6 Length = 294 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 61/104 (58%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K I+ + +I++++++P+++D VA S +Y ++F+ + +Y+ Q+++LLA Sbjct: 190 NKEIRKALKYIEKNLNRPISLDEVASHVYLSSYYFSKLFKKEMNVNFINYVNQKKMLLAK 249 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ I ++A +LG+ F +VFR++FD TP YR L Sbjct: 250 DMLKNPRWSIDNVARNLGFTQTSYFCKVFRKEFDVTPKGYRETL 293 >UniRef50_Q15WE0 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q15WE0_PSEA6 Length = 350 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 5/101 (4%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I++++ +I+EHID PL +A + +S ++ QR F T + +Y+ RL A EL Sbjct: 22 IENVLTYINEHIDHPLLATDLADVACFSVFHFQRAFTLYTGYNVAEYVLLTRLRKAVYEL 81 Query: 67 RTTERP---IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 R RP + DIA+ G+ Q+F+R F+RQF + PS +R Sbjct: 82 RY--RPSMSVLDIALSCGFSHHQSFTRAFKRQFCQAPSIFR 120 >UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ15_CLOCL Length = 290 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 59/98 (60%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + I +I+E++D + + VA+++ S+++ RMF +T L +YIR+R+L LA EL Sbjct: 13 MNSAINYIEENLDGEIEMGEVARRACCSEYHFTRMFSFITDIPLNEYIRRRKLTLAGFEL 72 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + ++ I D+A GY S +F+R F+ TPS+ R Sbjct: 73 KNSDIKIIDLANKYGYDSPNSFTRAFQGMHGVTPSEAR 110 >UniRef50_A5FBU0 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBU0_FLAJ1 Length = 357 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 63/101 (62%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I++L I + ++P I ++KKSG S LQ F+ + ++T+ DYI R+L A + + Sbjct: 250 IKELSEVIKANPEEPFTIKSLSKKSGLSPNKLQEGFKMIHNRTVNDYITHMRVLKAEILI 309 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 RT++ I +I +G+ S+ FS++F+++F+ +P +Y+ L Sbjct: 310 RTSDLNISEIVYCIGFTSRSYFSKIFKQKFNCSPKEYKFNL 350 >UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHZ9_9MOLU Length = 280 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 59/96 (61%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 I +I+ H+ + ++ + +AK +G ++ Q+ F +T+ +L +YIR+RR+ LAAV+L+T E Sbjct: 11 IEYIENHLTEKIDYEQLAKIAGCPSYHFQKTFLYMTNISLSEYIRKRRISLAAVDLQTGE 70 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 I DIA+ GY S F+R F+ PS R + Sbjct: 71 DKIIDIALKYGYESPTAFNRAFQAVHGIAPSLVRKK 106 >UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAW9_9FIRM Length = 303 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +ID H+ + L+I +A +G +K YLQ +F H T+G YI Q+RL A L + Sbjct: 182 YIDRHLLEELSIPAIAACAGVNKSYLQALFSRTMHCTIGSYINQKRLNQAVFLLTNSSLS 241 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + D+A GY S+Q F+ F++ + +PS YR Sbjct: 242 VTDVAFASGYNSRQHFAHTFQKFYGISPSHYR 273 >UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7H0_9BACL Length = 301 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 60/106 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ IQ I +I+E + + L + VAK YS+++ R F +T+ YIR+RRL Sbjct: 1 MNQINTIQKSIDYIEERLGEGLTLAEVAKAMFYSEYHFHRTFLFFVGETMTSYIRKRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA L ++ I DIA+ G+ S + F+R FR+ + P++ R R Sbjct: 61 LAAELLAHSDLKIVDIALRCGFGSHEAFTRAFRKMYGILPTECRRR 106 >UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K766_BACHD Length = 297 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 67/105 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + +I+E++ + + ++ +AK + +S ++ R+F+ + +++ DYIR+RRL Sbjct: 1 MDYVVCIQRTLDYIEENLQEQMTLEQLAKIACFSPFHYHRVFQAIVGESVMDYIRKRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L T+ + IA+++G+ Q++F+R F++ + +P YR+ Sbjct: 61 CAAERLFYTDEKVITIAIEVGFQYQESFNRAFKKIYGVSPRQYRN 105 >UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97LX8_CLOAB Length = 288 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 62/98 (63%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + + + +++E++++ + VA + SK+Y R+F+ +T TLGDYIR+R+L LA ++ Sbjct: 7 MNNALRYVEENLERNIESGEVANAAHMSKFYFLRIFKILTGMTLGDYIRERKLSLATKDI 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +T + I DI+ GY + + F++ F+R +P++ R Sbjct: 67 VSTNQKIIDISYKYGYETPEAFTKAFKRLNGISPTEAR 104 >UniRef50_B6FV70 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B6FV70_9CLOT Length = 309 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 1/94 (1%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I D++ +I+ ++ L+ID +A + SK+Y+ R+F++ T +LG+YI Q+RLL A +L Sbjct: 193 IADILHYINANLSAHLSIDDLASRFYLSKYYMMRLFKSETGYSLGNYITQKRLLFAK-DL 251 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTP 100 P+ + D G+ TFSR +R+ F +P Sbjct: 252 ILQGSPVLEACFDCGFQDYSTFSRAYRKCFHESP 285 >UniRef50_B5JGT3 Bacterial transcription activator, effector binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGT3_9BACT Length = 318 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 59/104 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + I+ I PL+I+ +A + S W+ QR F + + +G YIR+RR+ Sbjct: 22 MRQIQAIQTQLDRIESLITAPLSIEKLALDASMSYWHFQRTFTAMVGEPVGRYIRRRRIA 81 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA+ L E + D+A+D + S + F+R F+ + TPSD+R Sbjct: 82 HAAMRLLDYESTLLDLALDYQFESHEAFTRAFKNELSVTPSDWR 125 >UniRef50_C6IFE4 AraC family transcription regulator n=9 Tax=Bacteroides RepID=C6IFE4_9BACE Length = 377 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 63/104 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H K+IQ++I +I+ H+ + LN D ++ SG SK++ +R+FRT T + +G YI++ R+ Sbjct: 105 HHKMIQNIIVYINGHLTEVLNTDTLSSMSGLSKFHFRRVFRTATGENIGSYIQRLRMEHV 164 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A L +T+ + I Y ++ + ++ F++ F + S YR + Sbjct: 165 AHLLISTDYTLKQIIEQTSYQTKYSIAKAFKKHFGISTSQYREK 208 >UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=A9KRP2_CLOPH Length = 292 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 58/102 (56%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 K ++I +I++++ ++ D +++ +G S + QRMF + + L +YIR RRL LAA Sbjct: 5 KKFNEVIKYIEDNLKGEISYDTISQIAGCSIYNFQRMFSYIADKPLSEYIRNRRLTLAAF 64 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 ++ ++ I DI+ GY SQ FSR FR PS R+ Sbjct: 65 DIMNSKDRIIDISFKYGYESQDAFSRAFRSFHGVLPSAARNE 106 >UniRef50_A6TN59 Helix-turn-helix-domain containing protein, AraC type n=7 Tax=Clostridia RepID=A6TN59_ALKMQ Length = 303 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 60/99 (60%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 +Q + +I+++++ P+ + +AK +GYS+W+ R+F+ +T + +Y+R RL AA+ L Sbjct: 10 VQRMQDYIEQNLNCPITLSDLAKVAGYSQWHSARIFKELTGKAPFEYMRALRLTKAALLL 69 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 R + D+A D + S + F+R F +QF +P Y + Sbjct: 70 RDKRTKVIDVAFDFVFDSHEGFTRAFSKQFGVSPKKYSN 108 >UniRef50_A9KR18 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KR18_CLOPH Length = 301 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 56/93 (60%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I+ ++ + ++ +VA+K+ S + QRMF +T + +YIR+RRL AA+EL+ T Sbjct: 13 YIENNLTEDIDFTIVAQKACCSSYNFQRMFSFITDVPIAEYIRRRRLTQAAIELQNTNAK 72 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + D+A+ GY S +FSR F TP++ + Sbjct: 73 VIDVALKYGYDSTVSFSRAFSNIHGITPNEAKQ 105 >UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHI4_CLOPH Length = 259 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 63/103 (61%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +++ I+ ++ ++DEH + +++ +A G++ Y+ R+F H TL Y+ + R+ Sbjct: 153 TYEDILPSILLYVDEHYLEQFSLEDLASHLGFNPSYVSRLFSERVHCTLTHYVMELRVNY 212 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L+ TE+ I +IA + G+ +Q++F+RVF + + TP +YR Sbjct: 213 AKHLLQNTEKSITEIAYECGFATQRSFNRVFLQLVNTTPREYR 255 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 QK+ Q L A ++ P ++ +A+ G S W+L R F+ T + ++ +R+ A Sbjct: 208 QKVKQHLQA----NLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSEWFIHQRIQRAC 263 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LR T P+ DIA ++GY S FS+VFRR+ P+ YR R Sbjct: 264 RLLRETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYRRR 306 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 55/95 (57%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 + +ID H + + +D +AK +G+SK++ R+F+ T+ T Y+ Q+R+ LA L Sbjct: 186 ICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIELALTLLADP 245 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + + AM G+ + TF RVF+ + TP+++R Sbjct: 246 NISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFR 280 >UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3592F Length = 284 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 63/105 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H + + ++ ++ H D+PL+++ VA + G+S YL R+F+ + + DY++ R+ A Sbjct: 168 HLEKLSEITEYMKNHYDEPLSLEKVADRFGFSPTYLSRIFKRYANISYRDYLQDLRVEYA 227 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 E+ T+ + DIA++ G+ + F++ F +++ PS+YR +L Sbjct: 228 VKEMVHTDHELGDIAVNHGFADSRAFAKAFAKRYGCLPSEYRKKL 272 >UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=Q24TQ4_DESHY Length = 305 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 60/98 (61%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ + + + H+ + ++ ++VAK++ S ++ QR+F + +LGDYIR RRL AA +L Sbjct: 21 IQRSLDYTEAHLTEKIDYEMVAKQAYSSAFHFQRVFSILCGFSLGDYIRMRRLARAAEDL 80 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T+ I IA+ GY + ++FSR F R TP++ R Sbjct: 81 LCTDEKIIHIALKYGYDTPESFSRAFLRFHGITPTEAR 118 >UniRef50_C6LHX0 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHX0_9FIRM Length = 399 Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 62/98 (63%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I H++ L++ ++A+++GY++ YL + F+ T T +YIR++RL AA L Sbjct: 298 VRACCEYISLHLEDRLSLSMLARQTGYTENYLSKKFKRETSLTPNEYIRRQRLEQAAFLL 357 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 RTT+ + +I+ L + SQ F+ FRR F TP++YR Sbjct: 358 RTTQDDVQNISERLQFCSQSYFADHFRRYFGVTPTEYR 395 >UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9YCD3_9FIRM Length = 310 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Query: 7 IQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I + +I+EH+ D+ L+++ V GYSK++ R+F +T + YI++RR+ AA Sbjct: 26 ISRAVDYIEEHLQDETLDLNAVTAAVGYSKYHWHRLFTALTGVPVHRYIQRRRMSEAARR 85 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T PI IA+D GY +Q++FSR F+ + +P YR R Sbjct: 86 LVFTADPILRIALDSGYQTQRSFSRQFQAVYHCSPKRYRRR 126 >UniRef50_UPI0001C352BF transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C352BF Length = 296 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 60/106 (56%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S+ I +I +IDE++D+ L + +A K Y++ Y+ R+F+++ +L YI +R+ Sbjct: 183 SNAGIYNSIIDFIDENLDKELKLKNIANKFNYNEQYIARLFKSLGSVSLHQYILNQRISQ 242 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L T I +IA LGY F ++++R+ TPS+YR+ Sbjct: 243 ANYYLSETSLSIKEIAQKLGYHDSHNFMKIYKRETGLTPSEYRNSF 288 >UniRef50_D0LEJ4 Helix-turn-helix-domain containing protein AraC type n=5 Tax=Actinobacteria (class) RepID=D0LEJ4_GORB4 Length = 164 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 52/91 (57%) Query: 14 IDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPI 73 +D +P+ +D +A +G S+ + R F T ++ Y++ RRL AA LR+T+R + Sbjct: 17 VDVRFAEPVTVDHMAAAAGLSRAHFTRAFTTAFGESPHAYLQTRRLERAAAMLRSTDRSV 76 Query: 74 FDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 DI M +G S +F+ F R F RTP+ YR Sbjct: 77 ADICMAVGLSSVGSFTTSFTRAFGRTPTAYR 107 >UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Bacteroidales RepID=Q8A6I0_BACTN Length = 285 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 63/104 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +QK + ++ +I++H+ + +++ +A+ S +S +Y R+ + + +G +I + R A Sbjct: 11 YQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTFIVRTRTEAA 70 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR ++ PI DIA +GY S + S+VFR+ + +P +YR+ Sbjct: 71 ARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNN 114 >UniRef50_A9KR86 Transcriptional regulator, AraC family n=21 Tax=Clostridiales RepID=A9KR86_CLOPH Length = 298 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +++++ I+ + +I+EHI + + ++ VA + GYS ++ R+F ++ +YIR RRL Sbjct: 5 LNYREDIETCVEYIEEHIKENITMEEVASQIGYSLYHFSRVFSLCKGISVMEYIRNRRLS 64 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LAA +L R I DIA D + + F+ FR F +P+ + R+ Sbjct: 65 LAATQLFQG-RKIIDIAFDYEFETPSGFANSFRNAFGYSPTQFMKRM 110 >UniRef50_UPI0001C3636B helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3636B Length = 274 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 61/106 (57%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S ++++ + + EH ++ + + +A G+S+ Y + + T+ +Y+ R++ Sbjct: 162 SDAELLERMRTYFAEHYNEKIGLADMASHLGFSESYCSKYIKKKTNMNFLEYLNSCRIMR 221 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A LRTTE + +IA +G+ S Q+F+RVF+ D +P++YR RL Sbjct: 222 AETLLRTTENSVTEIAYAIGFTSIQSFNRVFKSFCDESPTEYRKRL 267 >UniRef50_D2LQS1 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQS1_BACS4 Length = 301 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 62/104 (59%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + IQD +++ HI++ +NI+ + + YSK++ R+F+ V ++ +Y+++R+L Sbjct: 1 MDYLEKIQDFSDYVEAHIEEDMNINAIINQLYYSKFHFYRVFKAVVGLSVHEYVKRRKLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA L T+ I IA+ G+ SQ+ F R F++ + P +R Sbjct: 61 RAADCLLHTKDSILTIALQFGFQSQEVFIRNFKKIYGVPPGKFR 104 >UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I706_CLOCE Length = 284 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 57/94 (60%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 I +I+ ++ ++ + A+ + S ++ QRMF ++T L +YIR+RRL LAA EL+T++ Sbjct: 11 IDYIESNLADKISYNKAAQIACCSTYHFQRMFSSITDVPLSEYIRRRRLTLAAFELQTSD 70 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + D+A GY S + FSR F++ P+ R Sbjct: 71 IKVIDVAFKYGYESPEAFSRAFKKLHGVMPTSAR 104 >UniRef50_A1ZL96 Transcriptional regulator, AraC-type n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZL96_9SPHI Length = 290 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 61/104 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +Q IQ ++ +I +H+ +PL++ +A+ +S ++ R+ R ++ LG YI++ R+ A Sbjct: 11 YQTRIQKVLEYIRQHLSEPLDVARLAEIGNFSVFHFHRIIRAYLNEPLGAYIKRVRMETA 70 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A L + PI D++ +GY +FS FR+ F ++P +R + Sbjct: 71 AQLLTYSHTPIHDLSYQMGYELPSSFSHAFRKYFGKSPQAFREQ 114 >UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 Tax=Clostridium botulinum RepID=B2TL55_CLOBB Length = 282 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 + +I+++I + L+I+ VAK + S ++ QRM+ +T T+ +Y+R+RRL LAA ++ + E Sbjct: 11 VEYIEDNITEKLDIEKVAKIALSSPFHFQRMYHVITGVTIVEYVRRRRLTLAAQDIISGE 70 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + I ++A GY + + F++ FRR + +PS R Sbjct: 71 K-IINVAYKYGYETPEAFTKAFRRMYGMSPSAARE 104 >UniRef50_Q13JQ4 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=Q13JQ4_BURXL Length = 281 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 54/105 (51%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +H + + +I+ H + L +D +A S+++L R F T ++ Y+R RRL Sbjct: 3 AHMNPVGKALWFIESHFARELTLDEIANCGCVSRFHLARAFEAATGFSVMRYVRGRRLSE 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L + I +A+D GY S + F+R FR QF TP R R Sbjct: 63 AARRLASGAPDILAVAIDAGYGSHEAFTRAFREQFGLTPDALRAR 107 >UniRef50_B3IA10 LdaA n=1 Tax=Escherichia coli E22 RepID=B3IA10_ECOLX Length = 327 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Query: 7 IQDLIAWIDEHIDQ-PLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 + + +ID+++D+ +NID + SGYS+ YLQ +F+ +G YI+ RR+ AAV Sbjct: 46 VNAITQYIDDNLDKTSINIDDLVAYSGYSRRYLQLLFKRHIGMAVGRYIQLRRVSRAAVF 105 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LR T+ + +I+ L Y S QTFSR F++ TP YR Sbjct: 106 LRLTDLSLSEISERLLYDSPQTFSREFKKNTGYTPLQYR 144 >UniRef50_D1ARB2 Transcriptional regulator, AraC family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARB2_SEBTE Length = 285 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 57/100 (57%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + + + +I+ +++ + I +A+ S++ +QR+F ++ TLG+YIR RRL AAV++ Sbjct: 7 LNNALEYIENNLENDVKIKKIAQICLCSEYNVQRVFSIISGVTLGEYIRNRRLSKAAVDI 66 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 R T I DIA Y S FS+ F+ +P D R R Sbjct: 67 RETNMRIIDIAFKYNYESADAFSKAFKNFHGISPKDGRVR 106 >UniRef50_B7GNV2 Transcriptional regulator, AraC family n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GNV2_BIFLI Length = 291 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 57/102 (55%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++I+ + ++ H +PL+ V++K GYS+ + R+F + T DY+ + RLL A Sbjct: 186 RVIRRIRHYVQRHYREPLSTAQVSQKFGYSREHFSRIFSKYSGVTFKDYVTRVRLLAACD 245 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ PI I + G+ S QT F R+F TPS+YR R Sbjct: 246 LLTNTDMPINQIVRESGFPSSQTMRGSFDREFACTPSEYRSR 287 >UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) protein n=2 Tax=Bacillus RepID=Q2B3U5_9BACI Length = 297 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 62/104 (59%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +++ IIQ I I+ + + L++D +A+ +G+SK++ R+F+ T+ +YIR RR+ Sbjct: 4 VAYSSIIQKSIEHIESSLHEDLSLDHIAQTAGFSKFHYHRIFQKEVGVTVSEYIRYRRIA 63 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +A L T+ I DIA+ + SQ+ F+R F++ + P YR Sbjct: 64 NSAHMLLYTDEKILDIALYFQFESQEAFTRSFKKYYHLPPGKYR 107 >UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I3_ERYRH Length = 288 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 59/100 (59%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 +Q+ I +I+ H+D L ++ +A S YS ++ +F +T + DY+R+RRL A + Sbjct: 13 LQNAIDYIETHLDSSLKLEDIAIHSNYSPYHFHNLFSALTGMGVMDYVRRRRLSEAGMLF 72 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + + + D+A+ Y S ++FS+ F++Q TPS+ + R Sbjct: 73 ISQKVKVIDLAVHYDYESAESFSKAFKKQHHYTPSEIKKR 112 >UniRef50_C3PJK8 HTH-type transcriptional regulator n=2 Tax=Corynebacterium aurimucosum ATCC 700975 RepID=C3PJK8_CORA7 Length = 412 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 54/98 (55%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 +I ++DEH Q + + +A +GYS Y +F +V + +YI + RL A LR T Sbjct: 224 VIEYVDEHYQQKITLRNLADFAGYSPAYFSDLFSSVVGIPVSEYITRVRLAEAVQLLRRT 283 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + PI D+A+ G+ + S FRR F +T S YR +L Sbjct: 284 DWPITDVALAAGFPDNKALSLAFRRAFSKTASQYRKQL 321 >UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IEN8_9CLOT Length = 279 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 55/91 (60%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 I +I+ H+ + + D +A+ + YS ++ QR F +T T+ +Y+R RRL LAA EL + Sbjct: 11 IDYIEVHLSENIVCDDIAQSAFYSSFHFQRTFSLLTGMTVSEYVRNRRLSLAAQELLNYD 70 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 + D+A+ GY + ++F++ FRR PS Sbjct: 71 SKVIDVALKYGYDTPESFAKAFRRFHGVLPS 101 >UniRef50_B5RA11 Putative transcriptional regulator n=35 Tax=Salmonella enterica RepID=B5RA11_SALG2 Length = 285 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 64/104 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + II ++ I++++++ ++I+ + +GYS+ LQ F+ ++G YIRQR+L Sbjct: 2 MMKKAIIISVLEQIEKNLEERIDIEKLVVITGYSRRSLQDFFKEKCGVSIGKYIRQRKLS 61 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +A L+ T + + DIA +G+ S Q++SR ++ F P++YR Sbjct: 62 RSATLLKLTSQSVTDIAFRMGFDSVQSYSRELKKTFGVNPNNYR 105 >UniRef50_Q5WCV1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCV1_BACSK Length = 293 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 61/104 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + H + ++ WI++H+ +P N+ ++A+ SK Y+ ++FR T ++ DY+ RR+ Sbjct: 180 LRHIHYAERIMGWIEDHLTEPFNLSLLAQDLYLSKSYVSKVFRRETGSSITDYLTARRMK 239 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L+TT PI +I+ +G + F ++F+R+ + TP YR Sbjct: 240 EACHLLQTTSLPIDEISQRIGLTNVSYFIQMFKRKTNATPHQYR 283 >UniRef50_B6GD23 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GD23_9ACTN Length = 305 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I++H+D +++ A+ + S+ +RMF V L +YIR+RRL AA+ L ER Sbjct: 23 YIEKHLDDDIDVVEAARLATCSEGQFRRMFSYVAGVGLTEYIRRRRLSCAALALSRGER- 81 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + D+A+ GY S F+R FR F +PSD R Sbjct: 82 VIDVAIRCGYASSTAFTRAFREAFGVSPSDAR 113 >UniRef50_A7B0M3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7B0M3_RUMGN Length = 281 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I DLI +I++H+ + L++D ++ + SK+Y+ R+F+ T T+G+YI RRLLLA L Sbjct: 181 IVDLIQYINQHLTESLDVDFLSSRVYLSKYYMMRLFKAETGYTIGNYITYRRLLLART-L 239 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTP 100 PI + G+ TFSR ++ +F P Sbjct: 240 ILDGMPITQACLASGFQDYSTFSRAYKTEFHEPP 273 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 59/102 (57%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +Q++ +I++H + L ++ AK G+SK++ R+F+ + T +Y+ ++R+ A Sbjct: 186 YQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRVKCA 245 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L +TE I D+AM+ G+ S +F R F+ +PS++R Sbjct: 246 EGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RI67_9MOLU Length = 263 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 59/99 (59%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 II+ ++ +I++H D L++ ++A +S+ YL RMF+ T TL YI + RL A + Sbjct: 163 IIKQIVTYIEQHYDDELSLTILANHFHFSEVYLSRMFKEKTGITLLSYINKIRLNHAYND 222 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L T I +IA++ G+ + + F+++F+ + PS YR Sbjct: 223 LMNTSLTINEIALNHGFKNVKAFNKIFKEYYHDIPSKYR 261 >UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CMD7_SHEPW Length = 302 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 59/101 (58%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ ++ +I ++ DQ + ID VAK +G Y+ ++F+ + ++ YI Q RL A L Sbjct: 190 IQTILKYIADNYDQKITIDDVAKLTGLHPNYVMKLFQGIMKISIKQYINQLRLQHAQALL 249 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 T P+ +IA++ G+ S F +F+R+F+ TP +R+ + Sbjct: 250 VDTNNPVLNIALEAGFGSISRFYDIFQREFNMTPLQFRNSI 290 >UniRef50_C4IM74 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=C4IM74_CLOBU Length = 277 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 64/108 (59%), Gaps = 2/108 (1%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M +I+ I +I +HID+ + I VA++ +SK+Y R+F+ T +++ +I++ +L Sbjct: 1 MKTNEIVNRSITYIMKHIDENITIGDVAEQCHFSKYYFSRIFKNETGESIYGFIKRLKLE 60 Query: 61 LAAVELRTT-ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +A L+ ER I DI D GY +S+VF++ + +P ++R+ + Sbjct: 61 QSAFRLKVERERTITDIGFDYGYCP-SNYSQVFKKHHNESPIEFRNNI 107 >UniRef50_C5RQY0 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQY0_CLOCL Length = 286 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 56/89 (62%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I+EHI + + V++ + YS ++ R+F + L +YIR+R+L LAA+EL++ + Sbjct: 13 YIEEHICDDIALADVSEVTTYSSYHFGRLFYYIAEMPLSEYIRKRKLTLAAMELQSNDVK 72 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 + D+A+ GY + +F+R F RQ TP+ Sbjct: 73 VIDLAVKYGYDNADSFTRAFVRQHGVTPT 101 >UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAG6_9DELT Length = 279 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 63/101 (62%), Gaps = 1/101 (0%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q+I++ ++ + H+D+ ++ + +A +G S + R+FR +T +++ ++R+ RL AA Sbjct: 9 QRILR-VVDHVQAHLDEDVDPETLADIAGLSLHHFHRVFRGLTGESVMGFVRRLRLERAA 67 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 ++L+ E P+ +A++ GY S + F+R FR +F P YR Sbjct: 68 MQLKLGEAPVTQVALEAGYGSHEAFTRAFRNRFGVPPRAYR 108 >UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9BU22_DELAS Length = 326 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 1/99 (1%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++ +ID H+DQPL+ +A + +S+++ R+F +TLG Y ++RRL AA L Sbjct: 18 INRVLNYIDAHLDQPLDGAHLADIANFSRFHFHRIFAAWMGETLGSYAQRRRLEKAAFRL 77 Query: 67 RT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 ++ + + A+ G+ S + F+R F+ +F TPS +R Sbjct: 78 SCGSKETVLETALATGFQSGEAFARAFKLKFGCTPSAWR 116 >UniRef50_A6TUU5 Transcription activator, effector binding n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUU5_ALKMQ Length = 291 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 63/93 (67%), Gaps = 1/93 (1%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA-VELRTTER 71 +I+ H+D+ L + +++++ +S+++ QR++ ++T ++L +I++ RL AA + L +R Sbjct: 19 YIENHLDESLTVKRLSQRANFSEYHFQRIYGSMTGESLYGFIKRIRLEKAAHILLFDKDR 78 Query: 72 PIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 PI DIAM +G+ +Q +F++ F+ ++ S YR Sbjct: 79 PIIDIAMSVGFSNQTSFAKAFKSKYGVCSSSYR 111 >UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EAC Length = 447 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 58/104 (55%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M +I+Q I ++++H+ +PL ++ +A + S L R+F ++T + +YIR+RR+ Sbjct: 1 MQTGEIVQRAIDFVEDHLTEPLALEEIAGVAAMSLPNLYRLFHSITGHPVKEYIRKRRIS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA LR T+ P DI G+ S F + F+R TP YR Sbjct: 61 EAASCLRNTDLPTIDIGYRCGFESYPAFMKTFKRCTGLTPGAYR 104 >UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I964_9CLOT Length = 286 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 60/101 (59%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++ + IQ I +++ HI + +N + VA+ S ++ R+F +T T +YIR+RRL Sbjct: 1 MNYIQSIQKSIDYMENHILEDINYEDVARHVYMSNYHFHRLFSMITGITANEYIRKRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 +A E+ ++ + DI++ GY S ++FS+ F R TP+ Sbjct: 61 MAGQEISMSDAKVLDISLKYGYDSPESFSKAFMRFHGVTPN 101 >UniRef50_C6D8S9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S9_PAESJ Length = 534 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 57/100 (57%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I + +I+E++ LN + +A+ + YL R+FR T ++L DY+ RR+ + EL Sbjct: 430 IAKVQGYIEENLQHDLNREEIARHVYLNPAYLSRLFRKETGKSLTDYMVDRRMFRSIREL 489 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + T I DIA+ +GY S FS+ F++ TP DYR + Sbjct: 490 KLTNHKISDIAISVGYASFSHFSKQFKKSTGMTPQDYRKK 529 >UniRef50_C6D6D8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6D8_PAESJ Length = 413 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 55/101 (54%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ + +I H+DQPL + +A+ S +L R F+ T DY+ +R+ + + L Sbjct: 311 IRKAVDYISLHLDQPLTLSGLAETVEVSASHLSRQFKLETGMGFTDYVNWKRIEESKLYL 370 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 ++ PI DIA +G+ F RVF++ DRTPS Y H L Sbjct: 371 QSGTLPITDIAFLVGFNDLNYFGRVFKKYTDRTPSQYVHSL 411 >UniRef50_C5EMR3 Transcriptional regulator n=4 Tax=Clostridiales RepID=C5EMR3_9FIRM Length = 301 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 55/99 (55%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + +Q + +I EH+D+ ++ +A S YS WY R+F T DY+R+ RL +A+ Sbjct: 13 EAVQRMQDYIAEHLDEEISPGALAACSLYSPWYSYRLFVRYVGMTPSDYVRRFRLSRSAL 72 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 LR + + DIA ++G+ S + R F R+F P +Y Sbjct: 73 RLRDGKVKVVDIAFEMGFKSVDGYQRAFSREFGCNPKEY 111 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 58/100 (58%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ LI +I+ H L ID +++ GYSK + +F+ T + +++ Q RL A L Sbjct: 191 IRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELL 250 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + RPI +IA ++G+ + F+R F+R ++ TPS YR + Sbjct: 251 IHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKK 290 >UniRef50_C6CVD2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVD2_PAESJ Length = 536 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 39/104 (37%), Positives = 61/104 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ I+Q + A+I EH+++ L+ + +A + + YL R+FR T L DYI + R+ Sbjct: 426 MTVSPIVQKVKAYIAEHLNEELSREQLASIAFVNPAYLSRLFRKETGMVLTDYILKERME 485 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA L TT+R I +IA L Y + F+R+FR+ TP +YR Sbjct: 486 RAAELLATTDRSISEIADGLSYGNFSYFARLFRKVHGVTPQEYR 529 >UniRef50_A8MLY7 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MLY7_ALKOO Length = 308 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 61/98 (62%), Gaps = 1/98 (1%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + II + + +I+ +I++P+ + +AK +GYS ++ RMF+ + +Y+++R+L+ A+ Sbjct: 7 KTIIFNSLKYIETNINEPIMAEDIAKNAGYSLYHFSRMFKKQMGLPIMEYVKERKLIRAS 66 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 E+ + I D A++ GY S F++ F+ +F +P+ Sbjct: 67 EEI-VNGKKIIDTALNYGYQSHSGFTKAFKNKFGFSPA 103 >UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=Bacteria RepID=A5G790_GEOUR Length = 294 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 61/103 (59%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S+Q+ + ++ I +++D+PL I+ +A+ + S ++ R+F +T+ Y+R+ RL Sbjct: 16 SYQERLNRVLIHIQKNLDEPLTIERLAEVACLSPFHFHRIFSAHVGETVTGYVRRLRLER 75 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA + T + D A+ +GY + F+R FR +F +PS++R Sbjct: 76 AATRIAFTGESVTDTALGVGYETPAAFTRAFRERFGMSPSEFR 118 >UniRef50_Q187G0 AraC-family transcriptional regulator n=37 Tax=root RepID=Q187G0_CLOD6 Length = 288 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 54/104 (51%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ K I +++ +D ++ V + SGYS R+F +T TL +Y+R RRL Sbjct: 1 MNIIKSFNSTIDYLETVLDDEIDEKKVTRISGYSYSMFSRLFSILTEMTLSEYLRSRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA+ LR T+ I D+A GY S +F F+ TPS+ R Sbjct: 61 EAAIILRDTDEKIIDVAFKFGYESSDSFGTAFKNFHGFTPSEVR 104 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 55/100 (55%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+D++ WID ++ + + +A + QR+F H +Y+++RR+ LAA L Sbjct: 195 IKDMLGWIDRNLKDEITVSGIAGSANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELL 254 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 RTT R + DIA++ G+ S F + F+ TP+ YR + Sbjct: 255 RTTHRQVTDIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXJ2_PAESJ Length = 289 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 55/101 (54%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +IQ ++ +H QPL +D +A+ G +K++L R+F+ + Y+R RR+ A Sbjct: 177 LIQRAKDFMKQHYAQPLTLDQLAEHCGVNKYHLCRLFQKSDQTSPLAYLRDRRMEAAVAL 236 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LRTTE P+ I G+ + F +VFR TP +YR + Sbjct: 237 LRTTELPVQTIGEMCGFENSSYFGKVFREYMSMTPKEYRMK 277 >UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides RepID=C6IS69_9BACE Length = 315 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++ +ID H+DQPL + +A+ + +S ++ R+F + +T DYI++ R+ AA L Sbjct: 15 INRVMDYIDIHLDQPLELKSIAEIANFSPFHFHRIFTFLIGETPIDYIQRLRIEKAACRL 74 Query: 67 R-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 R + I +IA G+ + FSRVF++ F TPS +R Sbjct: 75 RENMDISISEIADSCGFCTVSLFSRVFKKFFGLTPSQFR 113 >UniRef50_A9KR14 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KR14_CLOPH Length = 281 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 55/94 (58%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I+E++ ++ D AK + S+ L MF VT L +YIR+RRL LAA+EL+ ++ Sbjct: 13 YIEENLSNEIDFDYAAKLALCSRNDLSNMFFIVTGIQLSEYIRRRRLSLAALELQNSDEK 72 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 I +I+M GY S F+R F+ Q +P R R Sbjct: 73 IINISMKYGYSSPTAFNRAFQNQHKVSPQYARSR 106 >UniRef50_C4Z408 Two-component system, response regulator YesN n=15 Tax=Clostridiales RepID=C4Z408_EUBE2 Length = 266 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 57/105 (54%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + + ++ ++++ + + ++D +A+ G SK+ L R F H+ Y+ RL Sbjct: 154 VGSKDLVYQAVSYVSGNFRKNFSLDDMARDLGVSKYVLSRTFSKTFHRNFNQYLNDTRLN 213 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L T I +I D G+ SQ+TF+RVF+ ++ TPS+YR+ Sbjct: 214 YACYRLENTSDAITNICYDSGFESQRTFNRVFKERYKVTPSEYRN 258 >UniRef50_B5CW93 Sensor protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CW93_9BACE Length = 1430 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Query: 4 QKIIQDLIAWIDEHIDQP-LNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ I+ L +++ +I P L++D++ K G + L M + ++ Q+LGD+IR RL A Sbjct: 1327 KEFIESLNGFLENNISNPDLSVDMLCKHFGLGRTRLYAMVKEISGQSLGDFIRDMRLNKA 1386 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A L+ T+ I +I + G+ S FS+VF+ +F TPSD+ Sbjct: 1387 AYLLKHTDMNITEIIYETGFGSNSHFSKVFKNKFGITPSDF 1427 >UniRef50_A6M0H0 Transcription activator, effector binding n=2 Tax=Clostridium RepID=A6M0H0_CLOB8 Length = 297 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 64/97 (65%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ I + +A+I++++ +++ ++ +G SK+YL R+F+++T +++ +Y++ R+L + Sbjct: 5 KETIIETVAYIEDNLYNKISLADISLHTGISKYYLHRIFKSLTGESIMEYVQGRKLTSSL 64 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTP 100 EL T I DIA++ G+ +Q++ R F++ F TP Sbjct: 65 NELINTTMRIIDIALEYGFDYEQSYIRAFKKCFGHTP 101 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 63/101 (62%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I +I+++ +P+ + +A+ + S+ Y R F+ +T ++ +Y+ R+ AA L Sbjct: 190 LKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRL 249 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 R T+ I ++A+D+G+ S F+ VFR++F TP +YR RL Sbjct: 250 RQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRL 290 >UniRef50_D1BNL8 Transcriptional regulator, AraC family n=5 Tax=Veillonella RepID=D1BNL8_VEIPT Length = 340 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 58/98 (59%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 +IA+IDEH +Q + ++ +AK GY+ Y + F+ + +Y+ + R+ A V L +T Sbjct: 179 MIAYIDEHYEQKIELEDIAKIGGYNIAYTSQFFKRQMGISFVEYVLRLRIRDATVRLAST 238 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + + IA D G+ + F+ F++ F+ TP++YR ++ Sbjct: 239 DEAVARIASDCGFADVKAFNVAFKKHFNMTPTEYRKQV 276 >UniRef50_C0CRX4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRX4_9FIRM Length = 280 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H + I L+ +I+ H+++ + ++ +A + YS++Y+ R+FR ++ +TL +YI+++R+ A Sbjct: 177 HAQTIAALLKYINTHLNEEITLEQLAAEVNYSEYYVSRLFRKISGKTLTNYIQEKRIEEA 236 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + +R PI A +G+ + F + F++ P+DY+ R Sbjct: 237 SCLIRGG-LPINQAAEQVGFNNYSYFYKTFKKIIGCNPADYQAR 279 >UniRef50_C9AWD9 AraC-family transcriptional regulator n=5 Tax=Firmicutes RepID=C9AWD9_ENTCA Length = 300 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 64/106 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ I +I++++ +PL I+ +A+ + S +Y QR+F + ++ +YI+ RRL Sbjct: 1 MHAWEAIQKSIDYIEDNLTEPLEIETLAQVASLSVFYYQRLFTRLVKISVREYIKLRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A+ L+ ++ + D+A ++G+ S FSR F+ + +PS Y+ + Sbjct: 61 RGALLLKNQKKRVIDVAFEVGFSSHAVFSRTFKTVYRISPSLYQKK 106 >UniRef50_A4QAY1 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum R RepID=A4QAY1_CORGB Length = 282 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 1/86 (1%) Query: 19 DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAM 78 D +++D +A+++ ++++L++MF T+ +L +YIR RRL LAA +L+ + + D+A+ Sbjct: 14 DLEVDVDKLARRALTTEYHLRKMFGTLAGMSLAEYIRNRRLTLAAADLKAGQ-AVLDVAV 72 Query: 79 DLGYVSQQTFSRVFRRQFDRTPSDYR 104 GY S + F+R FRR PS R Sbjct: 73 KYGYASSEAFARAFRRFHAVNPSQAR 98 >UniRef50_Q2SKI5 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKI5_HAHCH Length = 243 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 53/94 (56%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 ++D H+ P+ +D VA + S+ +L +F++ T DY+R +R+ LA L + Sbjct: 147 FLDAHLGDPITLDQVATAANLSRRHLSDLFKSAFGMTPMDYLRDKRMRLALELLENSPLS 206 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 I IA+D G+ +Q FS FRR F ++P +R R Sbjct: 207 IQQIALDAGFQNQAAFSDRFRRHFGKSPKHFRPR 240 >UniRef50_Q63B02 Transcriptional regulator, AraC family n=72 Tax=Bacillus RepID=Q63B02_BACCZ Length = 367 Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ +I WI+ ++ + ++D +++ GYS +Y F VT ++ Y+ RRL L+ +L Sbjct: 8 IQQMIDWIEVNLKKEFSLDELSRYMGYSPYYCSFKFHQVTGFSIRRYVLLRRLYLSIEDL 67 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + R I DIA+D Y SQ+ +SR F+ F P +++ Sbjct: 68 KNG-RKIIDIALDYNYSSQEAYSRAFKNVFGMNPREFQ 104 >UniRef50_O31249 Transcriptional regulator (XylS/AraC family) n=5 Tax=Acinetobacter RepID=O31249_ACIAD Length = 306 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 59/98 (60%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + + +A I + ++P ++ +A + S+ +F+++ H+T Y++Q RL LA L Sbjct: 206 LSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLL 265 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +T++ I IA +GY S+ FS+ F+RQF+++P YR Sbjct: 266 KTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKHYR 303 >UniRef50_D1T3G0 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3G0_9BURK Length = 285 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 53/92 (57%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +IDEHI QP+++ +A+ +GYS + R+FR ++ Y+ +RR+ A L R Sbjct: 190 YIDEHIGQPISVAEMARTTGYSTHHFARLFRQSFQKSPHQYVIERRIERARQLLLDPGRS 249 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + D+A + G+ +Q S FRR+ TP ++R Sbjct: 250 VADVAAECGFATQAHLSSAFRRRLGLTPGEFR 281 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 56/94 (59%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 +A+++EH+ +P N+ +++ G S+++ R+F+ T + Y ++R+ A + L+ T+ Sbjct: 236 VAYLEEHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLLLQETD 295 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 I I M +GY S F++VFRR+ PS YR Sbjct: 296 TSIIKIGMSVGYSSPSHFAQVFRRETGLPPSHYR 329 >UniRef50_A6LX85 Transcription activator, effector binding n=2 Tax=Bacteria RepID=A6LX85_CLOB8 Length = 297 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 56/100 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MS K +Q I +++ H+ + +N + VAK+ S + R+F + T +YIR R+L Sbjct: 1 MSFGKSLQSAIDYMESHLLEKINYENVAKEVHMSCYNFHRIFSLMAGITANEYIRNRKLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTP 100 LA EL+ T+ I D+A GY + ++F++ F R +P Sbjct: 61 LAGQELQLTDSKIIDVAFKYGYETPESFAKAFSRFHGVSP 100 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 57/98 (58%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ ++ +IDEH D+ L I +A S+ + R F+++ T +YI +RL AA L Sbjct: 189 IKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLL 248 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 R T+R I DI+M +G+ F ++F+R TPS++R Sbjct: 249 RETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFR 286 >UniRef50_C5RPC5 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C5RPC5_CLOCL Length = 395 Score = 65.5 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M QK + + +I+ ++ ++ AK S+W +R+F + L +YIR+RRL+ Sbjct: 1 MDWQKCMNQALDYIENNLACDIDYCAAAKIMNCSEWEFRRIFSFLAQIPLSEYIRRRRLV 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +AA++++ E+ I D+A+ GY SQ FSR F R PS R Sbjct: 61 MAAIDIKKGEK-IIDVAIRYGYESQAAFSRAFSRFHGIAPSLAR 103 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 52/100 (52%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ ++ W+ H +PL + A +S + R FR +T Q+ ++ + RL AA L Sbjct: 186 LKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEAL 245 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 RTT+ + IA G+ + F+R F+ F TP DYR + Sbjct: 246 RTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_A9DRZ1 Transcriptional regulator, AraC family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DRZ1_9RHOB Length = 315 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 53/101 (52%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K++ + +DE+I+ P+ I V+A+ G S LQR F T G R RRL+ A Sbjct: 213 SKLVSRALVLMDENIEAPVPIPVIAQHLGCSLKSLQRRFARSLDATPGQVYRHRRLIAAR 272 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +T+ I +IA GY + + +R F+ QF +TP D R Sbjct: 273 SLAESTDLSIAEIAARCGYENASSMTRAFKTQFGKTPMDMR 313 >UniRef50_C1PBK0 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK0_BACCO Length = 768 Score = 65.1 bits (157), Expect = 6e-10, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 65/107 (60%), Gaps = 4/107 (3%) Query: 2 SHQKI----IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQR 57 +H +I +++++A+I ++ +P+ + +A + S +YL R F+ ++ YI+Q Sbjct: 157 AHSRINDERMKEILAYIGKNYRKPITLAEIANRHYLSLYYLSRYFKEQVGESFSQYIKQL 216 Query: 58 RLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 RL A EL T+ PI I+++ G+ + + F++ F+ ++ +TPS+YR Sbjct: 217 RLKSAVRELVYTDHPITRISLNNGFPNVKAFNKAFKEKYRQTPSEYR 263 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 55/95 (57%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +ID H +PL ++ VA+++G S +Y ++F+ T DY+ R+ A L T++ Sbjct: 416 YIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQS 475 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + +I +GY FSRVF++Q +PS+YR ++ Sbjct: 476 LKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKV 510 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 57/92 (61%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +++ H+D+ +D +A+++G SK++ R+FR T + Y + R+ +A LR T R Sbjct: 215 FMEAHLDEEFRLDELAREAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLLRETSRS 274 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + ++ +++GY S F++VF+R+ PS+YR Sbjct: 275 VIEVGLEVGYSSPSHFAQVFQREAGVPPSEYR 306 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 62/101 (61%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + ++ +I E+ Q L+ID+++ K S YL R F+ T+ +YI RL + +L Sbjct: 184 LTEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDL 243 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 T++ I +IA++ G+ ++++F++VF+ ++ TP+ YR ++ Sbjct: 244 MNTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKI 284 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 61/107 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + ++ +I +I H +P+ + +A S+ R F+++T QT DY+ R+ Sbjct: 186 MTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVR 245 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA LR+ + I DIA+D+G+ F RVFR+ + TPS+YR +L Sbjct: 246 QAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_A1RF43 Transcriptional regulator, AraC family n=2 Tax=Shewanella RepID=A1RF43_SHESW Length = 293 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 57/103 (55%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 HQ ++ ++ I+++ LN++ +A K+ S +Y R F+ +T Y+ +R+ A Sbjct: 184 HQATMEMILNHINQNFSDNLNLEQMASKANLSMFYFSRTFKELTGTGFTAYLINKRMTEA 243 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T I IA +GY FSR+F++ F+R+PS++R+ Sbjct: 244 HCLLEQTNWSIEKIARSVGYNDVHYFSRLFKKTFNRSPSEFRN 286 >UniRef50_A4CH99 Transcriptional regulator n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CH99_9FLAO Length = 373 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 61/102 (59%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I++D+ I E + ++ ++K +G S++ LQ F+++ +T+ DY+R RL A Sbjct: 266 IVRDIARQISEQVAGDYSLPALSKATGLSQYKLQEGFKSLYTRTVADYVRHVRLETARNL 325 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LR T+ I ++ +G+ S+ FS +F++Q+ +PSD+ +L Sbjct: 326 LRKTDMNISEVVYSVGFNSRSYFSNIFKKQYGLSPSDFISKL 367 >UniRef50_UPI000178A004 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A004 Length = 514 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 57/94 (60%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 + WI +H+ +P+++ V+A++ G S Y+ ++FR T T+ YI + R+ A LR + Sbjct: 418 VQWIKDHLKEPISLPVIAEQVGLSPHYISKLFREETGSTVNQYITRLRMEKAIELLRHSN 477 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + +++IA ++G S + F+ FR +P+DY+ Sbjct: 478 KKVYEIAEEVGIPSYRYFTVTFRNWTGVSPTDYK 511 >UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CWX4_9VIBR Length = 316 Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 55/102 (53%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++I+ + +ID H +PL + +A++SG S Y+ RMF+ V DY+ R+ A Sbjct: 185 ELIKTCLTYIDSHYMEPLTLTDIAERSGLSYHYVSRMFKRVCGFNFKDYLTFIRVSKALP 244 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T PI DIA G+ + FR+ +D+TP+ +R + Sbjct: 245 LLCDTTFPITDIAHKCGFSEHKLLIAAFRKYYDQTPTAFRKK 286 >UniRef50_C0WE40 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WE40_9FIRM Length = 283 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 54/105 (51%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 HQ I + L+ +I H + I +A + YS R+F+ H+T+ ++ + RL A Sbjct: 177 HQSITKTLMGFIKAHYHENFAITDLAAFTSYSGSECCRIFKETVHETIYQFLNKYRLEKA 236 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AV LR TE P+ +A G+ S F + F+ Q RTP +R L Sbjct: 237 AVLLRNTELPVSAVAQRTGFSSTSYFIKCFKLQTMRTPLQFRKEL 281 >UniRef50_Q1QTE9 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTE9_CHRSD Length = 318 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 54/94 (57%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 +AW++ H +QPL+ +A+++ SK L R+F+ T G+Y ++ RL A LR + Sbjct: 220 LAWLERHPEQPLDGAQLAREACMSKARLYRLFQREVGCTPGEYQQRLRLARARQWLRDAD 279 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 PI +I LGY S F+R F+ + TP DYR Sbjct: 280 APITEICYSLGYRSLSHFTRRFKAAYGLTPGDYR 313 >UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY5_DESVM Length = 436 Score = 64.7 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I +I +I + +D +A + +S ++ R+F + +TL +IR+ R+ AA L Sbjct: 75 INRVIDYIVADPARDFTLDELAGAAPFSPFHFHRIFAGLVGETLHAFIRRLRMDRAANML 134 Query: 67 R-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + D+AMD G+ S Q F+R FR +FD TPS+YR R Sbjct: 135 AFAPALSVTDVAMDCGFSSSQNFARAFRERFDMTPSEYRRR 175 >UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7P5_BACCO Length = 292 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 58/103 (56%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S +K I+ + +I +HI QP+ ++ VA S +Y ++F+ T +T ++ ++++ L Sbjct: 183 SSKKEIKQALQYIQKHIHQPVTLEEVAGHVYLSPYYFSKLFKKETGETFVSFVNRQKMNL 242 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L + P+ IA LG+ FS+VF+R + TP+ YR Sbjct: 243 AKDMLANDDLPVSYIAHSLGFREISYFSKVFKRYYQTTPTSYR 285 >UniRef50_C7PQL4 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PQL4_CHIPD Length = 332 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 55/99 (55%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQD+ +I H+ Q L+I ++KK+ + ++ F+ V +I R+ AA L Sbjct: 225 IQDVANYITHHLHQSLSIADLSKKARLNLDKFEKTFKQVMGSAPQKFIEDTRMQEAARLL 284 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 RTT+ PI D+A +GY Q F++VF+R F TP YR Sbjct: 285 RTTDIPIADVAYKVGYADQGYFTKVFKRVFGVTPRKYRQ 323 >UniRef50_Q17ZT7 AraC-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q17ZT7_CLOD6 Length = 306 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA-AVE 65 +QD +I+EH+ +PL++D ++ +G+SK++ R+F+ + +TL Y+ + +L A A Sbjct: 17 VQD---YIEEHLHEPLSLDELSNIAGFSKFHFHRIFKAIEKETLAQYVNRLKLENATAFL 73 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + T+ + DIA G+ FSR F+ + +P YR+ Sbjct: 74 IHRTDMTVTDIAHYFGFTDSAVFSRAFKNYYKISPIKYRNN 114 >UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019685E3 Length = 329 Score = 64.7 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 64/103 (62%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S+ K + ++ +I ++ + + + +A + S ++ R+F++V ++ +G+Y+++ RL Sbjct: 49 SYLKPVNQVVDYIQSNLQEKIELTTLANLANISHFHFHRIFKSVMNENVGEYVQRVRLER 108 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA +L+TT + +IA +GY +Q S+ F++ F+ +PS YR Sbjct: 109 AAFKLQTTNLNLTEIAEQVGYQTQFALSKAFKKYFNISPSTYR 151 >UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=B2SZ92_BURPP Length = 314 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 54/91 (59%) Query: 14 IDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPI 73 I +H+D+PL+ID +A+ + S ++ R+++ + +T+ +R+ RL AA L PI Sbjct: 47 IYDHLDEPLDIDRLAEIACLSPYHWHRIYQAMYGETVATTVRRLRLHRAAGYLANGSMPI 106 Query: 74 FDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +IA GY S Q+FSR FR F P+ YR Sbjct: 107 VEIAERSGYSSLQSFSRTFRAVFGVPPAQYR 137 >UniRef50_C6LJK3 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LJK3_9FIRM Length = 320 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 61/106 (57%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S ++ +D+ +I+EH+D+ L I +A++ S L++ F +V +++ Y+R ++ Sbjct: 211 SQVELAKDVCRFINEHMDRRLTIRQLAEQFYVSPARLKKCFYSVYGESIQTYLRAYKMRA 270 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA L+TT+ P+ IA GY + FSR FR +P++YR + Sbjct: 271 AAQLLKTTDTPVAQIAASFGYDNSSKFSRAFREVMGVSPTEYRKSI 316 >UniRef50_B8I9A3 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A3_CLOCE Length = 307 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 54/92 (58%) Query: 13 WIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERP 72 +I+EH+ + LN++++A+ +G + YLQ +F + + Y+ + R+ AA L + Sbjct: 181 YINEHLYEDLNVEMIAEYTGINHSYLQTLFSKQFNCGIIAYVNKLRMEHAAFLLNNSNMS 240 Query: 73 IFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 I D+A LGY S+Q F +F + ++ +P YR Sbjct: 241 ITDMAFHLGYNSRQHFGYIFEKHYNMSPQQYR 272 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 56/102 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 K+IQ + +I+E+ + ++ VA+ S +YL ++F+ Y+ ++++ A Sbjct: 148 KVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKKMQKAKE 207 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ P+ IA++L Y FS+VF++ TPS+YR R Sbjct: 208 LLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKR 249 >UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=C7GHR9_9FIRM Length = 273 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 56/102 (54%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I + + ++ ++ + ++++ +A SK+ L RMF H Y+ RL A Sbjct: 159 LIYNAVEYVAKNFREKISLEKMAYDLCVSKYVLSRMFAKTFHCNFSKYVNGVRLNYAVAA 218 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L T I +I +D G+ SQ+TF+RVF+ ++ TP +YR R+ Sbjct: 219 LENTMDSITNICLDCGFESQRTFNRVFKDRYKITPREYRKRM 260 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria ... 169 3e-41 UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1... 165 4e-40 UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobact... 159 2e-38 UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1... 159 2e-38 UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonu... 158 6e-38 UniRef50_A8FAK8 Possible AraC family transcriptional regulator n... 157 1e-37 UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Pa... 156 1e-37 UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=... 156 2e-37 UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia... 156 2e-37 UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterob... 156 3e-37 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 155 3e-37 UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular or... 154 6e-37 UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobac... 154 1e-36 UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=E... 153 2e-36 UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=D... 153 2e-36 UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus ... 152 3e-36 UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 ... 152 4e-36 UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=B... 151 7e-36 UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostri... 151 9e-36 UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=D... 150 1e-35 UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B... 150 1e-35 UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwa... 150 1e-35 UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio ... 150 1e-35 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 150 1e-35 UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmanie... 150 1e-35 UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mir... 149 2e-35 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 149 3e-35 UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Des... 148 4e-35 UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2... 148 4e-35 UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides R... 148 4e-35 UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=P... 148 7e-35 UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio ... 147 8e-35 UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=R... 147 9e-35 UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Pr... 147 9e-35 UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC... 147 1e-34 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 147 1e-34 UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=... 147 1e-34 UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC ... 147 1e-34 UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Ba... 147 1e-34 UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=... 147 1e-34 UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=S... 146 3e-34 UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) pro... 146 3e-34 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 145 3e-34 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 145 4e-34 UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=C... 145 4e-34 UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curviba... 145 5e-34 UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 T... 145 5e-34 UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA... 145 5e-34 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 144 5e-34 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 144 6e-34 UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 ... 144 7e-34 UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=So... 144 7e-34 UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria... 144 7e-34 UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Ba... 144 8e-34 UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=C... 144 8e-34 UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family pr... 144 8e-34 UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 T... 144 8e-34 UniRef50_C6CVD2 Two component transcriptional regulator, AraC fa... 144 9e-34 UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=E... 144 9e-34 UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=D... 144 1e-33 UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostri... 144 1e-33 UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobac... 144 1e-33 UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=... 143 1e-33 UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Cl... 143 1e-33 UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. ... 143 1e-33 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 143 2e-33 UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=D... 143 2e-33 UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=S... 143 2e-33 UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=... 143 2e-33 UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Entero... 143 2e-33 UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=... 143 2e-33 UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1... 143 2e-33 UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n... 143 2e-33 UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=B... 143 2e-33 UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=D... 143 2e-33 UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostri... 142 3e-33 UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=C... 142 3e-33 UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reineke... 142 3e-33 UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=D... 142 3e-33 UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n... 142 3e-33 UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp... 142 4e-33 UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=... 141 4e-33 UniRef50_B7GST4 Transcription activator, effector binding n=1 Ta... 141 5e-33 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 141 7e-33 UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Ple... 141 7e-33 UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=C... 141 8e-33 UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepI... 141 9e-33 UniRef50_A6M032 Transcription activator, effector binding n=19 T... 141 9e-33 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 140 1e-32 UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n... 140 1e-32 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 140 1e-32 UniRef50_C6D8S9 Two component transcriptional regulator, AraC fa... 140 1e-32 UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=... 140 1e-32 UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Ta... 140 1e-32 UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=B... 140 1e-32 UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 ... 140 2e-32 UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus... 140 2e-32 UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n... 140 2e-32 UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Ta... 140 2e-32 UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID... 139 2e-32 UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID... 139 2e-32 UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=... 139 2e-32 UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostri... 139 2e-32 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 139 2e-32 UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=C... 139 2e-32 UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=C... 139 2e-32 UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=D... 139 2e-32 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 139 2e-32 UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Cl... 139 2e-32 UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 ... 139 2e-32 UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=... 139 3e-32 UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verruco... 139 3e-32 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 139 3e-32 UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n... 138 4e-32 UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriace... 138 4e-32 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 138 4e-32 UniRef50_A4WA37 Transcriptional regulator, AraC family n=3 Tax=E... 138 4e-32 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 138 5e-32 UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=P... 138 5e-32 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 138 5e-32 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 138 5e-32 UniRef50_D2LQS1 Transcriptional regulator, AraC family n=1 Tax=B... 138 5e-32 UniRef50_A4BA46 Transcriptional regulator, AraC family protein n... 138 5e-32 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 138 6e-32 UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridial... 138 6e-32 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 138 6e-32 UniRef50_UPI0001B9ECE6 two component transcriptional regulator, ... 138 6e-32 UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=F... 138 7e-32 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 138 7e-32 UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1... 138 8e-32 UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=C... 138 8e-32 UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicu... 138 8e-32 UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=... 137 9e-32 UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Cl... 137 9e-32 UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 T... 137 9e-32 UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID... 137 1e-31 UniRef50_C6CSY2 Two component transcriptional regulator, AraC fa... 137 1e-31 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 137 1e-31 UniRef50_Q17ZT7 AraC-family transcriptional regulator n=4 Tax=Cl... 137 1e-31 UniRef50_A9IAC9 Transcriptional regulator, AraC family n=1 Tax=B... 137 1e-31 UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteri... 137 1e-31 UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 ... 137 1e-31 UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Er... 136 2e-31 UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=C... 136 2e-31 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 136 2e-31 UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=S... 136 2e-31 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 136 2e-31 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 136 2e-31 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 136 2e-31 UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevi... 136 2e-31 UniRef50_C6LAX2 Regulatory protein SoxS n=1 Tax=Bryantella forma... 136 2e-31 UniRef50_UPI000174581F Two-component response regulator n=1 Tax=... 136 2e-31 UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=P... 136 2e-31 UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=B... 136 2e-31 UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n... 136 2e-31 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 136 2e-31 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 136 2e-31 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 136 2e-31 UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC... 136 2e-31 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 136 3e-31 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 136 3e-31 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 135 3e-31 UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=C... 135 3e-31 UniRef50_Q1GMI1 Transcriptional regulator, AraC family n=6 Tax=R... 135 4e-31 UniRef50_B5WD53 Transcriptional regulator, AraC family n=4 Tax=P... 135 4e-31 UniRef50_P96662 Uncharacterized HTH-type transcriptional regulat... 135 4e-31 UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=B... 135 5e-31 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 135 5e-31 UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 T... 135 5e-31 UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostri... 135 5e-31 UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=C... 135 5e-31 UniRef50_B3CE13 Putative uncharacterized protein n=1 Tax=Bactero... 135 5e-31 UniRef50_UPI0001789679 transcriptional regulator, AraC family n=... 134 6e-31 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 134 6e-31 UniRef50_UPI0001C36936 two component transcriptional regulator, ... 134 6e-31 UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=S... 134 6e-31 UniRef50_C6CVB2 Two component transcriptional regulator, AraC fa... 134 6e-31 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 134 6e-31 UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Ba... 134 8e-31 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 134 1e-30 UniRef50_A1ZNF5 Transcriptional regulator n=1 Tax=Microscilla ma... 134 1e-30 UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio ... 134 1e-30 UniRef50_A6TN59 Helix-turn-helix-domain containing protein, AraC... 133 1e-30 UniRef50_B1KWH9 Transcriptional regulator, AraC family n=2 Tax=F... 133 1e-30 UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Ca... 133 1e-30 UniRef50_Q5WCU8 AraC/XylS family transcriptional regulator n=1 T... 133 1e-30 UniRef50_UPI0001973804 AraC-family transcriptional regulator n=1... 133 2e-30 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 133 2e-30 UniRef50_B0SZN8 Transcriptional regulator, AraC family n=11 Tax=... 133 2e-30 UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostri... 133 2e-30 UniRef50_C5BDV7 Transcriptional regulator, AraC family n=45 Tax=... 133 2e-30 UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vi... 133 2e-30 Sequences not found previously or not previously below threshold: UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=C... 146 3e-34 UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=De... 143 2e-33 UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=S... 143 2e-33 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 143 3e-33 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 142 4e-33 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 140 1e-32 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 140 2e-32 UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=P... 139 2e-32 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 139 3e-32 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 139 4e-32 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 138 4e-32 UniRef50_C6CT66 Two component transcriptional regulator, AraC fa... 138 4e-32 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 138 5e-32 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 138 5e-32 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 138 5e-32 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 137 9e-32 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 137 1e-31 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 136 1e-31 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 136 1e-31 UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n... 136 2e-31 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 136 2e-31 UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=R... 136 2e-31 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 136 2e-31 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 136 3e-31 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 136 3e-31 UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=P... 136 3e-31 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 136 3e-31 UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobact... 136 3e-31 UniRef50_B6R4C2 Transcription activator, effector binding n=1 Ta... 136 3e-31 UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales Re... 136 3e-31 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 135 3e-31 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 135 4e-31 UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=C... 135 4e-31 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 135 4e-31 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 135 5e-31 UniRef50_A7VR09 Putative uncharacterized protein n=1 Tax=Clostri... 135 5e-31 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 135 5e-31 UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=C... 134 6e-31 UniRef50_UPI000178A7F3 two component transcriptional regulator, ... 134 6e-31 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 134 7e-31 UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=B... 134 7e-31 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 134 8e-31 UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Fla... 134 8e-31 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 134 9e-31 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 134 9e-31 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 134 1e-30 UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n... 134 1e-30 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 134 1e-30 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 134 1e-30 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 134 1e-30 UniRef50_Q18AY3 AraC-family transcriptional regulator n=15 Tax=B... 134 1e-30 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 133 1e-30 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 133 1e-30 UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=A... 133 1e-30 UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=A... 133 2e-30 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 133 2e-30 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 133 2e-30 UniRef50_Q2BBL2 Transcriptional regulator, AraC family protein n... 133 2e-30 >UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria RepID=SOXS_ECO57 Length = 107 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 107/107 (100%), Positives = 107/107 (100%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL Sbjct: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL Sbjct: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 >UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K6U1_BACHD Length = 300 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 38/105 (36%), Positives = 65/105 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MS+ + +Q I +I+ H+ +P++++ VA + YS ++ R+F+ T+ +YI++RRL Sbjct: 1 MSYIQSVQRAIDYIETHLHEPISLEKVAAHASYSYFHFHRLFKATVGCTMSEYIKRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L T+ I DIA + GY SQ+ F+R F++ F+ P YR Sbjct: 61 KAAYALLETKASIIDIAFEYGYESQEAFTRAFKQWFNVLPGKYRQ 105 >UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobacteriaceae RepID=B4EY53_PROMH Length = 300 Score = 159 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 80/105 (76%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+AW+D ++DQPL++D VA K+GYSKW+LQRMF+ VT Q +G YIR RRL Sbjct: 1 MDQTNIIRDLLAWLDNNLDQPLSLDNVATKAGYSKWHLQRMFKEVTGQAIGSYIRSRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AAV LR T RPI DIA+ + SQQTF+R F++QFDRTP+ YR Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFDRTPALYRR 105 >UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K766_BACHD Length = 297 Score = 159 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 67/105 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + +I+E++ + + ++ +AK + +S ++ R+F+ + +++ DYIR+RRL Sbjct: 1 MDYVVCIQRTLDYIEENLQEQMTLEQLAKIACFSPFHYHRVFQAIVGESVMDYIRKRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L T+ + IA+++G+ Q++F+R F++ + +P YR+ Sbjct: 61 CAAERLFYTDEKVITIAIEVGFQYQESFNRAFKKIYGVSPRQYRN 105 >UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TW49_9ENTR Length = 305 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 76/105 (72%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+ WID H+DQPL +D VA K+GYSKW+LQRMF+ +T Q +G YIR RRL Sbjct: 1 MDQNNIIRDLLYWIDTHLDQPLFLDNVAAKAGYSKWHLQRMFKNITQQAIGSYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AAV LR T RPI DIA+ + SQQTF+R F++QF TP+ YR Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFGITPALYRR 105 >UniRef50_A8FAK8 Possible AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK8_BACP2 Length = 295 Score = 157 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 70/105 (66%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H+K IQ+ + +I++H+ L + +AK +GYS+++ R+F+ V +++ DY+R+RR+ A Sbjct: 6 HEKTIQETLNYIEQHLKDDLPLQTLAKHAGYSRFHFHRIFKKVIKKSVVDYLRERRMTQA 65 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A +L T++ DIA + SQ++F+R F++ +D +P+ YR L Sbjct: 66 AKDLIHTDQRAIDIAFQYRFSSQESFTRAFKKIYDMSPARYRKLL 110 >UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK7_9BACL Length = 304 Score = 156 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 65/105 (61%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +Q+ + + +ID H+ LN+D +A+ S +SK++ R+F +VT +T YI ++RL Sbjct: 3 DYQERVDQVCKYIDAHLHHKLNLDQLAELSHFSKYHFSRIFASVTGETPFAYITKQRLAR 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA LR T + + +IA+ G+ S +F+ F++ F RTP++ R + Sbjct: 63 AAAYLRETNQSVLEIALGCGFESASSFNAAFKKHFGRTPTEMREQ 107 >UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=Bacillus cereus group RepID=B7JL95_BACC0 Length = 299 Score = 156 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 62/103 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++++I+ I +I+ H+ + L + VA S S ++ R+F+ ++ DYIR+RRL A Sbjct: 5 YKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTHA 64 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L +TER + DIAM G+ SQ+ F+R F+R F P YR Sbjct: 65 AQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYRK 107 >UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia RepID=D1P487_9ENTR Length = 295 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 50/106 (47%), Positives = 73/106 (68%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +I+++I WI+++++ L++D VA KSGY+KW+ QR+F+ T LG YIR RRL Sbjct: 1 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKNQTGLALGSYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AV LR T I DI++ + SQQTF R F++QF TPS+YR R Sbjct: 61 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKR 106 >UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B6XK96_9ENTR Length = 310 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 74/106 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +I+++I WI+++++ L++D VA KSGY+KW+ QR+F+T T LG YIR RRL Sbjct: 17 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKTQTGLALGAYIRARRLS 76 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AV LR T I DI++ + SQQTF R F++QF TPS+YR R Sbjct: 77 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKR 122 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 155 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 55/99 (55%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 +ID H +PL ++ VA+++G S +Y ++F+ T DY+ R+ A L Sbjct: 412 KAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAE 471 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 T++ + +I +GY FSRVF++Q +PS+YR ++ Sbjct: 472 TDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKV 510 >UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular organisms RepID=C4X304_KLEPN Length = 289 Score = 154 bits (392), Expect = 6e-37, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 77/105 (73%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL++W++ H+DQPL++D VA K+GYSKW+LQRMF+ VT +G YIR RRL Sbjct: 1 MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +AV LR T RPI DIA+ + SQQTF+R F++QF TP+ YR Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRR 105 >UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobacteriaceae RepID=ROB_ECO57 Length = 289 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 77/105 (73%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+ W++ H+DQPL++D VA K+GYSKW+LQRMF+ VT +G YIR RRL Sbjct: 1 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +AV LR T RPI DIA+ + SQQTF+R F++QF +TP+ YR Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRR 105 >UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=C8QFY6_9ENTR Length = 142 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 72/107 (67%), Positives = 86/107 (80%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++II L WID+++D+ L+ID VA KSGYSKW+LQRMFRTVT QTLG YIR+RRL Sbjct: 1 MMQEEIIHSLTHWIDQNLDKTLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LAA LR T+RP+FDIAM GY SQQTFSRVFRRQF +TP+ YRH + Sbjct: 61 LAAEALRQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRHTM 107 >UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN17_DESAA Length = 290 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 63/105 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +++ I + +I +H+D P+ ++ +AK + +S ++ R+F +T + L +YIR+ L A Sbjct: 8 YEERIIRVQMFIQDHLDDPMTLEELAKVACFSPFHFHRIFTAMTGEPLKEYIRRLLLERA 67 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A ELR + +P+ +A++ GY + + F+R FR F P YR L Sbjct: 68 AHELRYSSQPVVQVALNAGYQTHEAFTRAFRNMFGVPPRQYRTEL 112 >UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7H0_9BACL Length = 301 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 60/106 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ IQ I +I+E + + L + VAK YS+++ R F +T+ YIR+RRL Sbjct: 1 MNQINTIQKSIDYIEERLGEGLTLAEVAKAMFYSEYHFHRTFLFFVGETMTSYIRKRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA L ++ I DIA+ G+ S + F+R FR+ + P++ R R Sbjct: 61 LAAELLAHSDLKIVDIALRCGFGSHEAFTRAFRKMYGILPTECRRR 106 >UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 Tax=Bacillaceae RepID=B1HRP5_LYSSC Length = 287 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MS + IQ I ++++H+ + + I+ +A++ S ++ QR F +T ++ DY+R+RRL Sbjct: 1 MSWIESIQKAINFMEDHLLENITIEQIAQEVNSSVFHFQRTFAILTDMSIADYLRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA EL T++ I D+A GY + + F++ FR+Q TPS+ R R Sbjct: 61 LAAQELMDTDQKIIDLAYKYGYETPEAFTKAFRKQHYVTPSEARKR 106 >UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=Bacteria RepID=A5G790_GEOUR Length = 294 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 62/105 (59%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S+Q+ + ++ I +++D+PL I+ +A+ + S ++ R+F +T+ Y+R+ RL Sbjct: 16 SYQERLNRVLIHIQKNLDEPLTIERLAEVACLSPFHFHRIFSAHVGETVTGYVRRLRLER 75 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA + T + D A+ +GY + F+R FR +F +PS++R + Sbjct: 76 AATRIAFTGESVTDTALGVGYETPAAFTRAFRERFGMSPSEFRGQ 120 >UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RX40_9CLOT Length = 140 Score = 151 bits (382), Expect = 9e-36, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 70/107 (65%), Gaps = 1/107 (0%) Query: 1 MSHQK-IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 M +QK ++ +I +I+EH+++ LN++ +A+ +GYS+++L R+F T T+ Y+++RRL Sbjct: 1 MKNQKHTVRKVIDYIEEHLEEKLNLEQIAEHAGYSRFHLNRIFMEETGGTIHKYVQERRL 60 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AA +L T+ I IA D GY SQQ FS F++ + P YR R Sbjct: 61 TMAAEKLVDTDMDITQIAYDAGYQSQQAFSLAFKQVYLCPPGAYRKR 107 >UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6C946_DICDC Length = 313 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 69/102 (67%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I DL+ WI+ H++ PL I V KSGYSKW+LQRMF+ T +LG YIR RRL AAV Sbjct: 10 RFIADLVGWIESHLESPLMISDVTAKSGYSKWHLQRMFKKETGISLGTYIRNRRLSQAAV 69 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 EL+ T + I ++A+ + SQQ+F+R F++ F +P YR + Sbjct: 70 ELKLTSQTIQEVALRYCFDSQQSFTRTFKKHFGTSPGHYRKQ 111 >UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B8K3P3_VIBPA Length = 306 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 39/101 (38%), Positives = 64/101 (63%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 I ++ +I H+D PL++D +A +S +S+W LQR+F+ T T+ +Y+RQ +L LAA Sbjct: 12 NRISKVLGFIHRHLDTPLSLDEIAAQSCWSRWQLQRVFQAETGLTVANYVRQLKLSLAAE 71 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T++ + DIA+ G+ S+ FSR F++ F +P YR Sbjct: 72 LLLDTDQRVIDIALATGFNSEIAFSRAFKQFFACSPRVYRK 112 >UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwardsiella RepID=C5BEG3_EDWI9 Length = 122 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 47/104 (45%), Positives = 76/104 (73%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 HQ ++ LI WI++++D+ + ID +A+++GYSKWYLQR+F+ VT +L Y+R+RRL+ A Sbjct: 7 HQLLVDALIQWIEQNLDKRILIDDIAERAGYSKWYLQRLFKEVTGYSLAAYVRKRRLIRA 66 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A EL+ + + I +I + G+ SQQTFSR F+R++ +P YR + Sbjct: 67 AAELQRSNKKIMEIMLQYGFDSQQTFSRAFKRRYGTSPGSYRQQ 110 >UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSU9_9VIBR Length = 310 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 67/101 (66%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I ++++I +HI +PL++D +A++S +S+W LQR+F+T T + Y+R+ +L AA Sbjct: 16 RISKVLSFIHQHISEPLSLDDIARQSCWSRWQLQRVFQTETGMAVATYVRELKLSQAAER 75 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T + DIA++LG+ S+ +FSR F++ F +P YR + Sbjct: 76 LIDTSDRVIDIALELGFSSEISFSRSFKQVFGLSPRAYRKQ 116 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 67/105 (63%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S++ IQ I +I+E + + + +A+ +G+S+ + R+F+ + T+ +Y+R+RRL Sbjct: 3 SYETQIQRSIDYIEEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLAR 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L T+ I DIA + G+ S +TF+R F++ F TPS+YR + Sbjct: 63 AAYQLSHTDEKIIDIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQ 107 >UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmaniensis RepID=B2VKB8_ERWT9 Length = 141 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 70/105 (66%), Positives = 82/105 (78%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H II L WID ++ + L+ID VA KSGYSKW+LQRMFRTVT QTLG YIR+RRL LA Sbjct: 2 HDDIINTLTHWIDNNLGKNLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLTLA 61 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A LR + RP+FDIAM GY SQQTFSRVFRRQF +TP+DYR+ + Sbjct: 62 AEALRQSHRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTDYRNTM 106 >UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mirabilis RepID=C2LM40_PROMI Length = 298 Score = 149 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 74/106 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +++D+I WI++++D L++D++A+KSGY+KW+ QR+F+ T +LG Y+ RRL Sbjct: 1 MLQENVVKDIIVWIEQNLDSRLSLDIIAEKSGYTKWHFQRLFKAYTGISLGKYVLARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR T + DI++ + SQQTF R F++QF+ TPS+YR + Sbjct: 61 CGAYALRITRSSLLDISLKYHFDSQQTFCRAFKKQFNITPSEYRKK 106 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 56/101 (55%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +IQ I++I+EH ++ +N++ +A + Y +F+ + +Y+ + R+ + + Sbjct: 311 LIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIRIEQSKLL 370 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L+ T+ I +IA+++G+ Q FS+VF+ TP YR Sbjct: 371 LKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQN 411 >UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V01_DESDG Length = 308 Score = 148 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 61/104 (58%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +++ I I W++EH+++ +++D +A ++ +S ++ R+FR V +++ YIR+ RL Sbjct: 19 TYRMRIMRAILWLEEHMNEAVSLDDMAAQAHFSPYHFHRIFRGVAGESVMAYIRRLRLEK 78 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L + DIA D GY + + FSR FR QF +PS R Sbjct: 79 AVHRLAYGSASVTDIAFDAGYEAHEAFSRAFRAQFGMSPSALRR 122 >UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368D7 Length = 320 Score = 148 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 65/105 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I ++ +++EH+ + +N + +A+ +G S +Y QR+F+ +T + + +Y++ RRL Sbjct: 1 MHAWEAIDGVLDFMEEHLREEMNTEALAQSAGLSPFYFQRLFKRLTGRPVLEYVKMRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA L E+ I DIA+D G+ S +F+R F+ + +P YR Sbjct: 61 LAASALEDREKRILDIAVDYGFSSHASFTRAFKEAYGISPEKYRK 105 >UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides RepID=C6IS69_9BACE Length = 315 Score = 148 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 1/106 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + ++ I ++ +ID H+DQPL + +A+ + +S ++ R+F + +T DYI++ R+ Sbjct: 9 IEYRSRINRVMDYIDIHLDQPLELKSIAEIANFSPFHFHRIFTFLIGETPIDYIQRLRIE 68 Query: 61 LAAVELRTT-ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA LR + I +IA G+ + FSRVF++ F TPS +R Sbjct: 69 KAACRLRENMDISISEIADSCGFCTVSLFSRVFKKFFGLTPSQFRK 114 >UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QBQ6_9ENTR Length = 288 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 72/102 (70%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ I DL+ WI+ ++ LNID+++ KSGYSKW++QRMF+ +T QTL Y R+RRL ++A Sbjct: 8 KQYINDLVDWIEANLTDELNIDLISLKSGYSKWHMQRMFKEMTGQTLASYTRKRRLTMSA 67 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + LR T P+ DIA+ G+ +QQ F+RVF+ F TP YR Sbjct: 68 MALRLTRMPLIDIAVRFGFDNQQNFTRVFKNHFSLTPGAYRR 109 >UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D8X3_9VIBR Length = 295 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 67/102 (65%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ ++ +I +++D+PL + +A S +S+W LQR+F+ T+ L Y+R+++L A Sbjct: 9 HLNRVEKIVDYIHQNLDKPLTVTELADISCWSRWQLQRVFQEQTNHNLAQYVREQKLSRA 68 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +L +++ + DIA+D G+ S+ +FSR F++ F +P YR Sbjct: 69 AEQLLKSDQKVTDIALDFGFNSEVSFSRAFKQLFAISPRQYR 110 >UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=Rhodobacteraceae RepID=B6R2M9_9RHOB Length = 283 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 64/103 (62%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++K + ++ +I ++D L++D +A + S+++ R+F+++ +TL IR+ RL A Sbjct: 10 YEKRMLRVLEYIYNNLDGDLSLDALADVACMSRFHWHRVFQSMRGETLATSIRRIRLNRA 69 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A++L +++PI +IA GY S Q+FSR F+ ++ P +R Sbjct: 70 ALDLIQSKQPITEIAEQYGYPSAQSFSRAFKGEYGMAPGQFRE 112 >UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Proteus RepID=B4EVW5_PROMH Length = 304 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 49/103 (47%), Positives = 73/103 (70%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + ++I++L+ WI+ ++++PL +D VA KSGY+KW+LQR+F+ T TL YIR RRL A Sbjct: 18 NIEVIKELLLWIEVNLEKPLLLDDVAIKSGYTKWHLQRVFKQATGLTLASYIRGRRLTKA 77 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A ELR T+ P+ IA+ + SQQ+F+R F+ F TPS+YR Sbjct: 78 ATELRLTKLPVLTIALRYQFDSQQSFTRRFKAVFGVTPSEYRK 120 >UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Clostridium RepID=A6M0I1_CLOB8 Length = 127 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+++ I+ I +I+ ++++ + + +A K+ SK++ R+F +V + + +YIR++RL Sbjct: 1 MNYEACIKKSIEYIENNLNKKIQLKELADKAFLSKYHFHRVFHSVVGEPVAEYIRKKRLE 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA EL TTE I DIA+ + +Q++F++ F++ + P ++R Sbjct: 61 EAANELLTTENKIIDIALKYQFSNQESFTKAFKKLYGIPPKEFRKN 106 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 53/101 (52%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I +IDEH PL ++ VA+ G S +Y ++F+ T DY+ + R+ A E+ Sbjct: 411 IGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKEM 470 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + + +I +GY FSRVF++ +P++YR +L Sbjct: 471 ADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKKL 511 >UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=Firmicutes RepID=B7HW35_BACC7 Length = 281 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 66/106 (62%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + + + +I+ +D+ ++ +AK + S+++ RMF +++ +L +YIR+RRL Sbjct: 1 MDWLERMNNALEYIENSLDEDIDYKKIAKAASCSEFHFSRMFSSISGVSLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA E++ + I D+A+ GYVS FSR F++ TPS+ R++ Sbjct: 61 LAAFEIQKGDIRIIDVAIKYGYVSSDAFSRAFKKMHGITPSNARNK 106 >UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Marinomonas RepID=A6VR73_MARMS Length = 306 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 69/109 (63%), Gaps = 3/109 (2%) Query: 1 MSHQKI---IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQR 57 M++Q I+ ++ +I E++D+ +++ +A+KS +S+W QR+F T ++ YIR+ Sbjct: 1 MANQDRLTRIEKVLDYIHENLDESIHVSSLAEKSCWSRWQFQRVFGQATGLSVAQYIREL 60 Query: 58 RLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 RL AA L +++ DIA+ G+ S+ +FSR F++ F+ TP DYR R Sbjct: 61 RLSKAAELLLSSKNRHVDIAIQCGFDSEISFSRAFKQMFNCTPRDYRQR 109 >UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Bacteria RepID=C3RPB0_9MOLU Length = 286 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + +I+E+ D+ ++ID +A + SK+Y QR+F +T +T+ DY++ RRL Sbjct: 1 MYAWQEIQVTLDYIEENYDKEIDIDKLAAIAHLSKYYYQRLFFRLTKKTVNDYVKLRRLE 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L+ TE+ I DIA+ G+ F+R F+ + TP DYR++ Sbjct: 61 KAANQLKNTEKRILDIAIACGFSGHSAFTRAFKEVYKITPDDYRNQ 106 >UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=A7GBT6_CLOBL Length = 289 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 69/106 (65%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + K ++ I +I+E+++Q L + VAK GYS ++ R+F + +T+G+YIR+R++ Sbjct: 1 MDYIKSLEKAIMYIEENLNQDLKTEDVAKSIGYSYYHFTRLFEGLLGETIGNYIRKRKIT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +L T++ I DIA+D + S + F+R F++ +D +P++YR Sbjct: 61 KTAQDLIYTDKRIIDIALDFQFKSPEAFARAFKKIYDISPTEYRKN 106 >UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V467_SPHWW Length = 296 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 62/104 (59%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++Q + +++ HI + +++D++A+++G S+++ R+F+ T Y+ +RR++ A Sbjct: 193 SPVLQRVKDYVEAHIAEDISLDMLAREAGVSRFHFIRLFKDSVGMTPHAYLIERRMVRAC 252 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L T++ I +IA++ G+ F+ FRR + P ++R RL Sbjct: 253 NLLMHTKQSIGEIAVNCGFEDPSYFAARFRRLYRMCPREFRKRL 296 >UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) protein n=2 Tax=Bacillus RepID=Q2B3U5_9BACI Length = 297 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 62/105 (59%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +++ IIQ I I+ + + L++D +A+ +G+SK++ R+F+ T+ +YIR RR+ Sbjct: 4 VAYSSIIQKSIEHIESSLHEDLSLDHIAQTAGFSKFHYHRIFQKEVGVTVSEYIRYRRIA 63 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +A L T+ I DIA+ + SQ+ F+R F++ + P YR Sbjct: 64 NSAHMLLYTDEKILDIALYFQFESQEAFTRSFKKYYHLPPGKYRK 108 >UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=Cyanobacteria RepID=B0C3V1_ACAM1 Length = 283 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 54/98 (55%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 +Q ++ +ID H+D + + +A+ S ++ R+F+ T ++ Y+ Q+R+ A L Sbjct: 184 LQQVLDYIDAHLDCEIKLADLAQILDMSPFHFSRLFKLSTGKSPHQYLIQQRIEHAKQLL 243 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + T+R I DIA + G+ S S+ FR+ TP YR Sbjct: 244 KQTDRRIIDIAYECGFNSHSHLSKQFRQMMGVTPKVYR 281 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 56/102 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 K+IQ + +I+E+ + ++ VA+ S +YL ++F+ Y+ ++++ A Sbjct: 148 KVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKKMQKAKE 207 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ P+ IA++L Y FS+VF++ TPS+YR R Sbjct: 208 LLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKR 249 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + IQ I +I+EH D L+I VA+ + YL +F+ T +T Y+ + +L Sbjct: 396 YVNSIQQAIDYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQK 455 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A V LR T+ I +I +G+ FS VF++ F +PS++R Sbjct: 456 AQVLLRNTDMKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQN 500 >UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=Clostridium RepID=A7FVD8_CLOB1 Length = 294 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 65/105 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++ + + +I+ ++ +NID ++K + S+++ QR+F ++T T+ YI+ RRL Sbjct: 1 METIMLLNNTLEYIERNLHTAINIDDISKVACSSRYHFQRVFHSLTGFTVTQYIKNRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL +T+R I DIA+ GY S + F++ F+R +PS + Sbjct: 61 LAAEELVSTDRRIIDIALKYGYESPEAFTKAFKRLHGISPSALKK 105 >UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDH7_9BURK Length = 319 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + + ++ +ID H+D +++ +A + +S ++ R+F TLGDY+R+RRL +A Sbjct: 14 YTQRMNRVMDYIDSHLDGDIDLAALADVAHFSPFHFHRLFAAWMGATLGDYVRRRRLEVA 73 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A++L T + ++A+ +G+ S + F+R F+ +F ++PS +R Sbjct: 74 ALQLAGNTRISVLEVALGVGFGSGEAFARAFKLRFGQSPSAWR 116 >UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C357C1 Length = 307 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 69/106 (65%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 ++ + I +I +I+EH+ ++ ++++ +A YS+++L RMF +V L Y+ +RRL Sbjct: 21 NNIEEIAAVIDYIEEHLMEEKMDLESIASIFHYSRYHLHRMFASVAGFPLHTYLTRRRLT 80 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L T+RP+ +IA+ GY +Q++FSR F++ F +PS YR + Sbjct: 81 EAARLLVWTDRPVLEIALASGYETQRSFSRAFQKYFQHSPSRYRKK 126 >UniRef50_P77601 Putative HTH-type transcriptional regulator ykgA n=49 Tax=Enterobacteriaceae RepID=YKGA_ECOLI Length = 239 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 76/106 (71%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M QKI+Q L+ WI+ +++ P++I+ +A+KSGYS+ +Q +FR H LG+YIR+RRL Sbjct: 12 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC 71 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA+ +R T + + DIA+ L + SQQ+FSR F++ F +P +YRHR Sbjct: 72 RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHR 117 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 144 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 61/100 (61%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ + +++ H+D+ +D +A+++G SK++ R+FR T + Y + R+ +A L Sbjct: 209 LRRITDFMEAHLDEEFRLDELAREAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLL 268 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 R T R + ++ +++GY S F++VF+R+ PS+YR + Sbjct: 269 RETSRSVIEVGLEVGYSSPSHFAQVFQREAGVPPSEYRRQ 308 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 144 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 57/102 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q +++ +A+I H PL +A G S+ YL FR T +Y+ + R+L A Sbjct: 1094 QMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQAR 1153 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L +++ I +IA+++G+ S FSRVFR++ ++P +YR Sbjct: 1154 HLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRR 1195 >UniRef50_D1NY75 Multiple antibiotic resistance protein MarA n=5 Tax=Enterobacteriaceae RepID=D1NY75_9ENTR Length = 123 Score = 144 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 75/107 (70%), Gaps = 3/107 (2%) Query: 1 MSHQKIIQDLIAWIDEHI--DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRR 58 MS + ++ ++I W++ + ++ + ID +A KSGYSKW+LQR+F+ + TLG+Y+R+RR Sbjct: 1 MS-ESVVNEIIRWLESQLQRNEGIKIDTIADKSGYSKWHLQRVFKELKGCTLGEYVRKRR 59 Query: 59 LLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LL AA LR PI DIA+ G+ SQ TF+R+F++ FD TP+ +R Sbjct: 60 LLEAAKSLREGNLPILDIALQYGFSSQATFTRIFKKHFDTTPAKFRQ 106 >UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NSQ1_SODGM Length = 201 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 75/105 (71%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M IIQDL++W++ H+D PL ++ VA++SGYSKW+LQR F+ T Q +G YIR RRL Sbjct: 1 MDQAGIIQDLLSWLEGHLDTPLTLNRVAERSGYSKWHLQRKFKLATGQAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A + LR T R + DIA+ G+ SQQTF+R F++QF +TP+ YR Sbjct: 61 RAVLALRLTSRSVADIALQYGFDSQQTFTRPFKKQFIQTPALYRR 105 >UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria RepID=RAMA_KLEPN Length = 113 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 49/101 (48%), Positives = 75/101 (74%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++I ++ WID+++ QPL ID +A+ +GYSKW+LQR+F ++LG YIR+R+LLLAA Sbjct: 6 QVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKLLLAAR 65 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +LR T++ ++DI + G+ SQQTF+RVF R F++ P YR Sbjct: 66 DLRDTDQRVYDICLKYGFDSQQTFTRVFTRTFNQPPGAYRK 106 >UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Bacteroidales RepID=Q8A6I0_BACTN Length = 285 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 63/104 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +QK + ++ +I++H+ + +++ +A+ S +S +Y R+ + + +G +I + R A Sbjct: 11 YQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTFIVRTRTEAA 70 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR ++ PI DIA +GY S + S+VFR+ + +P +YR+ Sbjct: 71 ARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNN 114 >UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=Clostridiales RepID=B8FSY0_DESHD Length = 291 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 65/106 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++K ++ + +I+ H+ + ++ VAK +GYS ++L R F + +++G YI++RRL Sbjct: 1 MDYRKALEHAVMYIENHLGSDIKVEDVAKAAGYSYYHLNRQFTAILGESIGSYIKKRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA ++ T R I DIAM+ G+ S + FSR F+ + +P YR Sbjct: 61 DAAKKILYTNRKIIDIAMENGFESPEAFSRAFKAIYKVSPQTYRQN 106 >UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EC6 Length = 292 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 64/106 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + IQ+ I +I+ +I + L+ + +A ++ S +Y Q++F + TLG+YIR RRL Sbjct: 1 MNWAEGIQNAINYIENNITEELDNNSIAAQACCSSYYFQKIFSLLCDMTLGEYIRNRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LA EL +T+ + DIAM GY + ++F+R F +PS+ R Sbjct: 61 LAGSELISTDIKVIDIAMKYGYSTPESFTRAFTLFHGVSPSEARKN 106 >UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WGK8_BACSK Length = 280 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 37/99 (37%), Positives = 62/99 (62%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + D I +I+ H+D L +D +A + S+++ QRMFR +T + +YIR RR+ +AA EL Sbjct: 1 MLDSIEYIENHLDNELLLDEIAAVACMSRFHFQRMFRMLTGYAVSEYIRNRRITVAAQEL 60 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 ++ + D+AM GY S ++F++ FRR +PSD + Sbjct: 61 VHSKSKVIDVAMKYGYESPESFTKAFRRIHGISPSDAKK 99 >UniRef50_C6CVD2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVD2_PAESJ Length = 536 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ I+Q + A+I EH+++ L+ + +A + + YL R+FR T L DYI + R+ Sbjct: 426 MTVSPIVQKVKAYIAEHLNEELSREQLASIAFVNPAYLSRLFRKETGMVLTDYILKERME 485 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L TT+R I +IA L Y + F+R+FR+ TP +YR Sbjct: 486 RAAELLATTDRSISEIADGLSYGNFSYFARLFRKVHGVTPQEYRK 530 >UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=Enterobacteriaceae RepID=A8GD44_SERP5 Length = 118 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 73/105 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ I DLI WID ++++ L+I+ VA ++GYSKW+LQRMF+ T LG+YIR ++L Sbjct: 1 MNSTGFITDLIEWIDNNLEEKLDINTVAGRAGYSKWHLQRMFKRQTGYALGEYIRMQKLR 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 ++A L + PI +A+ LG+ SQQ+F+R F+R + +TP D+R Sbjct: 61 VSAERLANSGEPIVSVAISLGFDSQQSFNRSFKRHYGQTPGDWRR 105 >UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUU7_DESHD Length = 129 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 67/105 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++ + D + +I+E++D ++++ +A+K+ SK+Y R+F VT +++ YI +RR+ Sbjct: 1 MDYRAKVYDSLDYIEENLDDRIDLEDLAQKAYLSKYYYHRLFHKVTGESVTRYITRRRMA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA EL TE+PI DIA+ Y SQ++F+R F R + P YR Sbjct: 61 KAAEELVETEQPIIDIALKYQYASQESFTRAFMRIYGLAPGKYRK 105 >UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0CY04_9CLOT Length = 295 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 65/103 (63%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ I +I+ H+D+ +++ V+++ GYS +++ R+F V + +G YI +RRL A Sbjct: 10 HLTPLERAIEYIETHLDENIDLGDVSREMGYSYYHMTRLFSAVLGEPVGRYISRRRLYRA 69 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A +L ++R I DIA++ G+ S + FSR F+ F TP+ YR Sbjct: 70 AQQLVHSDRRIIDIALESGFQSPEAFSRAFKALFKTTPAGYRK 112 >UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobacteria RepID=A0KJN2_AERHH Length = 325 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 64/105 (60%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S I+ ++ +I ++D PL + +A++S +S+W LQR+F T T+ Y+R+ +L Sbjct: 42 SQLTRIERVLDYIHANLDLPLGLAELAEQSCWSRWQLQRVFLHETGLTVAHYVRELKLSQ 101 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L + + + D+A+ G+ S+ +FSR F++QF +P YR R Sbjct: 102 AAEALLSGRQRVLDLALCYGFGSEVSFSRAFKQQFGCSPLAYRKR 146 >UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=B2SZ92_BURPP Length = 314 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 60/104 (57%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ + ++ I +H+D+PL+ID +A+ + S ++ R+++ + +T+ +R+ RL A Sbjct: 36 YETRLGRVLDHIYDHLDEPLDIDRLAEIACLSPYHWHRIYQAMYGETVATTVRRLRLHRA 95 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A L PI +IA GY S Q+FSR FR F P+ YR + Sbjct: 96 AGYLANGSMPIVEIAERSGYSSLQSFSRTFRAVFGVPPAQYRKQ 139 >UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ6_9FIRM Length = 289 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 42/105 (40%), Positives = 73/105 (69%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++ +IIQ+++ +ID H++ L+ + +++++GYS+++L RMF ++T +L YI++RRL Sbjct: 3 TNIQIIQEVVDYIDSHLEDRLDAESISRQAGYSRYHLSRMFTSITGLSLHTYIQRRRLTE 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L T+RP+ DIA+ GY SQQ F+ FR F TP +R + Sbjct: 63 AARQLVFTDRPVMDIALSAGYGSQQAFTVGFRALFRTTPRAFRKK 107 >UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I964_9CLOT Length = 286 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++ + IQ I +++ HI + +N + VA+ S ++ R+F +T T +YIR+RRL Sbjct: 1 MNYIQSIQKSIDYMENHILEDINYEDVARHVYMSNYHFHRLFSMITGITANEYIRKRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +A E+ ++ + DI++ GY S ++FS+ F R TP+ R Sbjct: 61 MAGQEISMSDAKVLDISLKYGYDSPESFSKAFMRFHGVTPNIARR 105 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 64/103 (62%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ +I +I+++ +P+ + +A+ + S+ Y R F+ +T ++ +Y+ R+ AA Sbjct: 188 ERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAAS 247 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LR T+ I ++A+D+G+ S F+ VFR++F TP +YR RL Sbjct: 248 RLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRL 290 >UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY5_DESVM Length = 436 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ I +I +I + +D +A + +S ++ R+F + +TL +IR+ R+ A Sbjct: 71 YEARINRVIDYIVADPARDFTLDELAGAAPFSPFHFHRIFAGLVGETLHAFIRRLRMDRA 130 Query: 63 AVELRT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A L + D+AMD G+ S Q F+R FR +FD TPS+YR R Sbjct: 131 ANMLAFAPALSVTDVAMDCGFSSSQNFARAFRERFDMTPSEYRRR 175 >UniRef50_A8GJ26 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GJ26_SERP5 Length = 288 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 52/104 (50%), Positives = 77/104 (74%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + I++L+ WI++++ PL++D+V+ KSGYSKWYLQRMF+T T +L YIR RRL L Sbjct: 3 TQENHIRELLVWIEDNLTNPLSLDIVSAKSGYSKWYLQRMFKTQTGLSLASYIRARRLYL 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA LR T++ I DI+++ + +QQTFSR F++ F +PS YRH Sbjct: 63 AAFALRFTQKTILDISIEYQFDNQQTFSRCFKKHFAESPSVYRH 106 >UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=Firmicutes RepID=Q81BV9_BACCR Length = 296 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + I + +I+ +I+ L+I+ +A +G+SK++ R+F+ + +++L Y+ + +L A Sbjct: 10 YLRRIYKVQDYIESNINDSLSIEELADVAGFSKFHFHRIFKGIVNESLSRYVNRLKLERA 69 Query: 63 AVELRT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T+ I DIA G+ FSR F+ + +PS YR+ Sbjct: 70 THLLTYRTDMTITDIAYHFGFTDSAVFSRTFKNYYGVSPSQYRN 113 >UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XUB5_DESMR Length = 292 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 59/104 (56%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 Q+ + + ++ +D+ L + +A + +S ++ R+F +T +T+G Y+R+ RL Sbjct: 8 DWQRRVLAAMRLMEARLDEELALSDIAGAAHFSPYHFHRIFVGMTGETVGAYLRRLRLER 67 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L ++P+ +A++ G+ S + F+R FR + +PS +R Sbjct: 68 AAQRLCYGDQPVTTVALEAGFESPEAFARAFRAVYGVSPSAWRQ 111 >UniRef50_Q6WFA3 Putative transcription factor Roh n=1 Tax=Enterobacter cloacae RepID=Q6WFA3_ENTCL Length = 134 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 70/102 (68%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +++D++ W++ + L ++ +A+KSGYS+W+ QR+F+ T LG+Y+R RRL AAVE Sbjct: 10 VVKDIVQWVENSLTSTLLVEEIAEKSGYSRWHFQRIFKHATGIALGEYVRARRLTCAAVE 69 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ T + + +IA+ G+ SQQTF+R F+ +F P YR ++ Sbjct: 70 LKLTTKTVLEIALHYGFESQQTFTRSFKNKFHLPPGRYRKQI 111 >UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=Bacillales RepID=C6CRY2_PAESJ Length = 301 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 70/105 (66%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + IQ I +I+ HI + L++ +A+ + S ++ R+F+++ +T+ +Y+R+RRL + Sbjct: 4 DYLAQIQQTIDYIEAHISEELSLSRLAQVAKLSDFHFHRVFQSMAGETVMEYVRKRRLAI 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +A ++ ++ + DIA+D G+ + +TF+R F+R F+ TP++YR R Sbjct: 64 SAYQVANSDAKLIDIALDTGFQNHETFTRAFKRMFEMTPAEYRKR 108 >UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HZR5_LYSSC Length = 294 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + Q +I +I+E + + + ++ + +GYSK++L R+F+ T T+G+YIR RRL Sbjct: 1 MEYSQATQRIITYIEEQLMEEIELEFMPSITGYSKFHLSRIFKQETGLTIGEYIRMRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +AA L + I IA + SQ+ F+R F+ + P YR + Sbjct: 61 VAASCLIYSNASIITIAFKFQFQSQEAFTRAFKEVYALPPGKYRKLM 107 >UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n=2 Tax=Rhodobacterales RepID=A3VBK3_9RHOB Length = 278 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 67/103 (65%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++K + ++ ++ +++D L++D +A + S+++ R+F VT + + +IR+ RL Sbjct: 4 DYEKRLLRVLDYVYDNLDGDLSLDTLADVAALSRFHFHRVFTAVTGEPVAHFIRRVRLHR 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +EL +++ P+ ++A +GY + ++FSR FR F RTPS++R Sbjct: 64 AGLELLSSDAPVAEVAAKMGYDNARSFSRSFRDAFGRTPSEFR 106 >UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=Bacillales RepID=C6CRA3_PAESJ Length = 297 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 40/105 (38%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M H IQ I +I+E + + L+++ +A ++G+S ++ QR+F +T T+ +YIR+RRL Sbjct: 11 MEHYTRIQYAITFIEEQLQEALSLEAIAIRAGFSLYHFQRLFHAITGFTVQEYIRKRRLS 70 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA ELR T + DI++ Y SQ+ F+R F F P+ YR Sbjct: 71 RAAEELRVTRHTVLDISVSYQYGSQEAFTRAFAGYFGMAPAQYRK 115 >UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLA7_SORC5 Length = 346 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +Q+ + +I +I H + L++D +A + +S ++ R+F+++T + L ++I++ RL A Sbjct: 36 YQRRVNRVIDYIQAHRAEDLSLDTLAAVAAFSPFHFHRVFKSMTGENLREFIQRTRLETA 95 Query: 63 AVELRT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L I +IA++ G+ S F+R F+ +F + S +R+ Sbjct: 96 ASHLVQRPHADILEIALENGFSSASAFARAFKERFGMSASAWRN 139 >UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAH3_9DELT Length = 285 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 57/104 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 H + + ++ I H+D P+ + +A + +S ++ R+F + +++ +IR+ RL Sbjct: 11 DHAERMDRVLEHIQAHLDDPMQLLDLADIACFSPYHFHRIFSGMIGESVKSHIRRLRLER 70 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA+ L+ E P+ DIA G+ + ++F+R F F +P +R Sbjct: 71 AAITLKLGEAPVTDIAFQAGFETHESFTRAFNAMFGLSPQRFRQ 114 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 55/102 (53%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 II +I+E+ + +++D V+++ S +Y ++F+ T + +Y+ + RL A Sbjct: 429 IIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNAREL 488 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ + I +I GY FSR+F++ TPS++R RL Sbjct: 489 LQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRERL 530 >UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=Q24TQ4_DESHY Length = 305 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M IQ + + + H+ + ++ ++VAK++ S ++ QR+F + +LGDYIR RRL Sbjct: 15 MDWITGIQRSLDYTEAHLTEKIDYEMVAKQAYSSAFHFQRVFSILCGFSLGDYIRMRRLA 74 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA +L T+ I IA+ GY + ++FSR F R TP++ R Sbjct: 75 RAAEDLLCTDEKIIHIALKYGYDTPESFSRAFLRFHGITPTEARR 119 >UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I706_CLOCE Length = 284 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 59/104 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I +I+ ++ ++ + A+ + S ++ QRMF ++T L +YIR+RRL Sbjct: 1 MDWLNRMNKAIDYIESNLADKISYNKAAQIACCSTYHFQRMFSSITDVPLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LAA EL+T++ + D+A GY S + FSR F++ P+ R Sbjct: 61 LAAFELQTSDIKVIDVAFKYGYESPEAFSRAFKKLHGVMPTSAR 104 >UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y7_9GAMM Length = 297 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 57/98 (58%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 IQ L+ I+ ++ +N+ +A S W+ QR F+++ TLG YIR RRL AA L Sbjct: 8 IQTLVDRIEANLADDVNVLGLADAFHMSPWHFQRTFKSLIGDTLGGYIRGRRLTRAAQLL 67 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + R + DIA+ +G+ S + FSR F+ F+ TP +R Sbjct: 68 LESRRSVIDIAVSVGFNSHEAFSRSFKAYFNVTPKAFR 105 >UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC0_DESAD Length = 297 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 66/104 (63%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + + +++ +I ++D L+ + +A+ + +S + R+F+ + ++L +++R+ RL A Sbjct: 8 YNERMMEVLLYIQRNLDGDLSPETLAELACFSVAHFHRIFKGMVGESLKEHVRRLRLERA 67 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + L + + +IA+D G+ S +TFSR F+++F +PSD+R+ Sbjct: 68 SYRLCYSNTTVMEIALDAGFESPETFSRAFKKRFLVSPSDFRNN 111 >UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GKR6_9DELT Length = 306 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 65/105 (61%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL- 61 +++ I +I++++ + L+++ VA+++ +S ++ R++ +T ++L +I + RL Sbjct: 7 YRRRINRAQDYIEQNLGRSLSLEEVAQQAAFSPYHFHRLYTAMTGESLYQFILRLRLEKA 66 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AAV + R I +IA++ G+ S TF+R F+ +F + S+YR R Sbjct: 67 AAVAVACPHRSITEIALETGFSSPATFARAFKAKFGVSASEYRGR 111 >UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6N3_9CLOT Length = 288 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I+ + +I+ ++ + +++ +AK++GYS ++ R+F+ + ++ DY+R+RR Sbjct: 4 MCYINSIKKALNYIENNLQEDIDLSAIAKEAGYSLYHFHRIFKGIVGDSMKDYVRKRRFT 63 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA EL T + I +I + GY S++ FSR F + + R PS+ R Sbjct: 64 EAAKELVYTNKSIVEIGIKYGYESREGFSRAFEKVYGRNPSEVRR 108 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 47/106 (44%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + H+ II I ++ + + ++ A G S Y R+F+ ++ Y+ R+ Sbjct: 305 VKHRDIICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRIS 364 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ I +I G+ Q F++VFR+ TP +R R Sbjct: 365 RGRAMLLDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFRAR 410 >UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EE80 Length = 285 Score = 141 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + + I +I+ +I + ++ AK + S ++ QRMF +T TL +YIR+RRL Sbjct: 1 MDWVQRMNEAIGYIEANITEEIDYAEAAKVACCSAYHFQRMFPFITDVTLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL+ ++ + D+A+ GY S + F+R F+ TP+ R Sbjct: 61 LAAYELQNSDIKVIDLALKYGYDSPEAFARAFQNMHGTTPTAARQ 105 >UniRef50_B7GST4 Transcription activator, effector binding n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GST4_BIFLI Length = 286 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 67/105 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++ I +I+ H+++ + ++ V++++GYS +Y+ R+F +V +++G YI +RRL Sbjct: 1 MKRYPPLERAITYIEAHLNEYIGLNEVSRETGYSYYYMTRLFSSVLGESVGHYINRRRLY 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A+ +L +++ + DIA+D GY S + FSR F+ F +P YR Sbjct: 61 NASEKLIHSDQKVIDIALDCGYESSEAFSRAFKAVFGYSPVAYRK 105 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 58/100 (58%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++Q + +I E++++ ++ + VA G + YL R+F+ T Q L DY+ + ++ A Sbjct: 429 VVQKSVQYIKENVEEDISREDVAAHVGLNPAYLSRLFKKETGQNLIDYLIETKMARARQL 488 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L TT + IA +GY + F+++F++Q+ P +YR+ Sbjct: 489 LDTTGMTVSAIAQQVGYSNFSHFTKMFKKQYGINPQEYRN 528 >UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAG6_9DELT Length = 279 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 61/102 (59%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I ++ + H+D+ ++ + +A +G S + R+FR +T +++ ++R+ RL AA+ Sbjct: 9 QRILRVVDHVQAHLDEDVDPETLADIAGLSLHHFHRVFRGLTGESVMGFVRRLRLERAAM 68 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +L+ E P+ +A++ GY S + F+R FR +F P YR + Sbjct: 69 QLKLGEAPVTQVALEAGYGSHEAFTRAFRNRFGVPPRAYREQ 110 >UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM10_CLOPH Length = 136 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 60/98 (61%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I + +I+E+ + +D +AK GYSK++L RMF T T+ YI +RRL AA L Sbjct: 5 ISKVKKYIEENFKDDITLDDIAKNVGYSKYHLNRMFLENTGLTIHKYICERRLTEAADLL 64 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T++ I DIA+ +GY SQQ F+ F++ FD TP YR Sbjct: 65 LYTDQSIVDIALSIGYTSQQAFTLAFKQMFDCTPYKYR 102 >UniRef50_B7VRB4 Transcription activator n=6 Tax=Vibrionales RepID=B7VRB4_VIBSL Length = 290 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 62/95 (65%) Query: 11 IAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTE 70 +A+I ++ L+++ +A +S +S+W LQR+F+ T T+ +Y+R+ +L AA EL + Sbjct: 1 MAYIHANLSSALSLEDLATQSCWSRWQLQRVFQAETGLTVANYVRELKLSQAAEELLDGK 60 Query: 71 RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + DIA+ LG+ S+ +FSR F++ F +PS YR Sbjct: 61 DRVIDIALGLGFNSEISFSRSFKQMFGVSPSQYRK 95 >UniRef50_A6M032 Transcription activator, effector binding n=19 Tax=Bacteria RepID=A6M032_CLOB8 Length = 285 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 63/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I + I++I+E+I + + I +A+K+ S +Y Q+ F + T+G+YIRQRRL Sbjct: 1 MKWIEGIGEAISYIEENITEEITIKNIAEKTFMSPFYFQKGFAMLCGFTVGEYIRQRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LA +L +T+ I DIA+ GY S +F++ F R TP+ R Sbjct: 61 LAGSDLVSTDEKIIDIALKYGYASPDSFTKAFTRFHGVTPTAVRK 105 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 60/102 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + +++ +ID H + L +D +A SG+SK++ R+F+ T T DY+ RR+ A Sbjct: 200 YLQKFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAA 259 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L E I +IA+ G+ S TF+R+F+++ TPS+YR Sbjct: 260 EELLANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYR 301 >UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTK0_9PROT Length = 330 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 67/102 (65%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ + ++ I ++D+ +++D +A + +S+++ R+FR +T +T+G+++R+ +L A Sbjct: 38 YESRLLRVLVHIQRNLDRAMSLDELADVAAFSRFHFARIFRAMTGETVGEHVRRLKLERA 97 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +LR T + + +IA+D G+ + + FSR F+ QF PS +R Sbjct: 98 AGKLRHTRQTVTEIALDAGFDTPEAFSRTFKAQFGDPPSRFR 139 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 61/107 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + ++ +I +I H +P+ + +A S+ R F+++T QT DY+ R+ Sbjct: 186 MTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVR 245 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA LR+ + I DIA+D+G+ F RVFR+ + TPS+YR +L Sbjct: 246 QAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 55/103 (53%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ ++ L+ +++EH + + ++ A+ YS + + F+ Y+ + RL AA Sbjct: 232 RERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAA 291 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L TT P+ +A G+ + F+R+FRR++ +TP +YR Sbjct: 292 GMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_C6D8S9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S9_PAESJ Length = 534 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 57/103 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 I + +I+E++ LN + +A+ + YL R+FR T ++L DY+ RR+ + Sbjct: 427 SNTIAKVQGYIEENLQHDLNREEIARHVYLNPAYLSRLFRKETGKSLTDYMVDRRMFRSI 486 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 EL+ T I DIA+ +GY S FS+ F++ TP DYR + Sbjct: 487 RELKLTNHKISDIAISVGYASFSHFSKQFKKSTGMTPQDYRKK 529 >UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=Gammaproteobacteria RepID=B5XU59_KLEP3 Length = 289 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + Q + +I H+D+PL+++ ++ + S ++ R F T L YI+ RL A Sbjct: 10 YVGRFQRVCRYIARHLDEPLSLEALSAIAHSSPYHFHRQFSAYTGIPLYRYIQWLRLRRA 69 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + DIA+D G+ + ++FSR FR FD++P+ +R + Sbjct: 70 CWRLAFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQ 114 >UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019685E3 Length = 329 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 64/103 (62%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S+ K + ++ +I ++ + + + +A + S ++ R+F++V ++ +G+Y+++ RL Sbjct: 49 SYLKPVNQVVDYIQSNLQEKIELTTLANLANISHFHFHRIFKSVMNENVGEYVQRVRLER 108 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA +L+TT + +IA +GY +Q S+ F++ F+ +PS YR Sbjct: 109 AAFKLQTTNLNLTEIAEQVGYQTQFALSKAFKKYFNISPSTYR 151 >UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=B3QWJ9_CHLT3 Length = 331 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I I +I+ H+ + L+++ +AK + +S ++ R+F + +TL +I++ R+ A Sbjct: 16 YICRINRAIDYIETHLSEKLSLETIAKAAFFSPFHFHRIFHGLVGETLNRFIKRLRVEKA 75 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L ++ + DIA+D G+ + T SR F+ F +P+ +R Sbjct: 76 ARMLADNPKQTVSDIALDCGFSTTSTLSRAFKETFSMSPTAWRK 119 >UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97LX8_CLOAB Length = 288 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + + + +++E++++ + VA + SK+Y R+F+ +T TLGDYIR+R+L Sbjct: 1 MNWIGDMNNALRYVEENLERNIESGEVANAAHMSKFYFLRIFKILTGMTLGDYIRERKLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LA ++ +T + I DI+ GY + + F++ F+R +P++ R Sbjct: 61 LATKDIVSTNQKIIDISYKYGYETPEAFTKAFKRLNGISPTEARK 105 >UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BTE5_9BACI Length = 303 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 65/103 (63%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 +I+ ++ +I ++ + L++ VVAKK+G S ++ RMF+ V +TL Y+ + +L AA Sbjct: 21 EIVIPILVYIQANLHEDLDLKVVAKKAGLSPFHFHRMFKNVVGETLKQYVLRIKLEKAAF 80 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ + I I+ +LG+ + ++F+R F+R+F TP DYR + Sbjct: 81 ALKYWDEKILSISNELGFKNPESFTRAFKREFQYTPKDYRQQF 123 >UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMZ0_9PLAN Length = 286 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 59/101 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ I + I H+D+ L+++ +A + YS + R+FR + ++ DY+R+ R+ A Sbjct: 8 YEAKILRVQLLIQHHLDEDLSLEHLAAAADYSPCHFHRIFRGIVGESADDYVRRLRMERA 67 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A LR R + DIA+D GY S + F+R F R F TPSDY Sbjct: 68 AQSLRYRRRSVLDIALDAGYGSHEAFTRAFVRTFGVTPSDY 108 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 50/102 (49%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I I +I+++ + + + ++ ++ +Y ++F+ T + Y+ + R+ A Sbjct: 409 NNDSINKAIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKA 468 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+ T + I +I+ +G+ F + F++ TPS +R Sbjct: 469 CQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFR 510 >UniRef50_A6LYZ8 Transcription activator, effector binding n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYZ8_CLOB8 Length = 290 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 65/106 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++II I +I+ ++ +PL ++ VA YS ++ R F+ V +T+G YIR RRL Sbjct: 1 MKDKQIIGRAIIFIETNLYEPLTVESVASAVSYSYYHFHRYFQVVMGETIGSYIRSRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L +++ I DIA+ L + S ++F+R F++++ TP +YR Sbjct: 61 QAAYNLVHSKKRILDIAILLYFESAESFTRAFKKRYGITPMEYREN 106 >UniRef50_P28816 Transposon Tn10 tetD protein n=29 Tax=root RepID=TETD_ECOLX Length = 138 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 52/104 (50%), Positives = 72/104 (69%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H +I+D++ WI+ ++DQ L +D VA K+GY+KWY QR+F+ VT TL YIR RRL A Sbjct: 26 HTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRARRLTKA 85 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AVELR T++ I +IA+ + SQQ+F+R F+ F TPS YR Sbjct: 86 AVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRN 129 >UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A9KFE4_COXBN Length = 284 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+++ + +I +I +H+D+ L + ++ + +SK++ R+F T +L YIR RL Sbjct: 1 MNYEYQLIKVIEFIGKHLDEKLTLAQLSDVACFSKYHFHRLFTAYTGLSLQQYIRWLRLK 60 Query: 61 LAAVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 AA +L ++ I +IA++ G+ S + F+R F++ +P+ + Sbjct: 61 RAAHQLIVDKDKTIIEIAINAGFESNEAFTRAFKQVCGVSPTKF 104 >UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID=A8FAK9_BACP2 Length = 290 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + IQ I +I+E++ ++I ++ KS +S ++ QR+F+ +T ++ +YIR RRL Sbjct: 1 MDYYERIQHSIEFIEENLQNNISIKEISSKSCFSAFHFQRLFQAITGFSVQEYIRNRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L+ T++ + IA+ Y SQ+ F+R F + F TP +R Sbjct: 61 EAARLLKETKQNVLHIAIAFQYGSQEAFTRAFVQFFGVTPGRFRK 105 >UniRef50_P43463 HTH-type transcriptional activator aarP n=3 Tax=Providencia RepID=AARP_PROST Length = 135 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 42/102 (41%), Positives = 68/102 (66%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 II +++ WI+ ++ L++D +A+ SGY+KW+LQR+FR + LG+YIR+RR+ A Sbjct: 17 QSSIISEILVWIEGNLTNRLSLDDIAQHSGYTKWHLQRVFRKIVGMPLGEYIRRRRICEA 76 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A EL+TT + DIA+ + SQQ+F++ F+ +PS YR Sbjct: 77 AKELQTTNLQVIDIALKYQFDSQQSFAKRFKAYLGISPSLYR 118 >UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUD7_9FIRM Length = 286 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 62/106 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + + ++I+ + +I+++I PL + +A+ S YL ++ VT + + DYI++RR+ Sbjct: 173 LEYHEVIKKVENYINQNISGPLPLKDIAQHVFMSSAYLSTTYKNVTGRNITDYIQERRVS 232 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +RTT I DIA + G+ F++VF+++ TP +YR R Sbjct: 233 AACFLIRTTSGSISDIAQETGFSDANYFTKVFKKKTGMTPREYRQR 278 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 58/99 (58%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +A+++EH+ +P N+ +++ G S+++ R+F+ T + Y ++R+ A + L Sbjct: 232 LRRAVAYLEEHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLLL 291 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + T+ I I M +GY S F++VFRR+ PS YR Sbjct: 292 QETDTSIIKIGMSVGYSSPSHFAQVFRRETGLPPSHYRR 330 >UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RP62_CLOCL Length = 292 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 38/105 (36%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M +Q+ I +++++I + +N D +A+ + S ++ QRMF +T T+G+YIR RRL Sbjct: 1 MDWINSMQNAINYMEDNILEEINYDKIAQCAYSSTYHFQRMFSMLTGFTVGEYIRNRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL ++ I DIA+ GY + + F++ F+R TP+ R Sbjct: 61 LAAQELSFSKERITDIAIKYGYGTSEAFTKAFQRFHGITPTAARE 105 >UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ15_CLOCL Length = 290 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 60/104 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I +I+E++D + + VA+++ S+++ RMF +T L +YIR+R+L Sbjct: 7 MVWLDRMNSAINYIEENLDGEIEMGEVARRACCSEYHFTRMFSFITDIPLNEYIRRRKLT 66 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LA EL+ ++ I D+A GY S +F+R F+ TPS+ R Sbjct: 67 LAGFELKNSDIKIIDLANKYGYDSPNSFTRAFQGMHGVTPSEAR 110 >UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=Desulfovibrio vulgaris RepID=Q72FD7_DESVH Length = 326 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ + LI I ++ PL ++ +A S +S ++L R+F TV +TL +IR+ R+ A Sbjct: 10 YESRVNRLIDHIVNNLSGPLTLEEMAAVSSFSPFHLHRIFSTVMGETLAAFIRRVRIERA 69 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AV L R + DIA G+ S Q +R F R P YR Sbjct: 70 AVLLLWNPTRSVTDIAFACGFSSSQNLARAFTRHMGMPPGVYRR 113 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 54/99 (54%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++ +I+ H D+ L++ +A + S +YL +F VT TL YI + R+ A L Sbjct: 183 IAEVARYINAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALL 242 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 R TE P+ +IA +GY S F RVF++ +P YR Sbjct: 243 RETELPVTEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRR 281 >UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=Q18D16_CLOD6 Length = 303 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 64/104 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + I+ ++ + ++I+ +A K+ S +Y QR+F+ + ++T+ +YI+ RRL Sbjct: 1 MHAWESIQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A+ L + I D+A++ G+ S +TF+R F++ + TP YR Sbjct: 61 RASEYLAEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEKYR 104 >UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 Tax=Clostridium botulinum RepID=B2TL55_CLOBB Length = 282 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 1/105 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + +I+++I + L+I+ VAK + S ++ QRM+ +T T+ +Y+R+RRL Sbjct: 1 MDWLDSMNKAVEYIEDNITEKLDIEKVAKIALSSPFHFQRMYHVITGVTIVEYVRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA ++ + E I ++A GY + + F++ FRR + +PS R Sbjct: 61 LAAQDIISGE-KIINVAYKYGYETPEAFTKAFRRMYGMSPSAARE 104 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 53/103 (51%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H I I +I+++ +Q +++ ++ ++ +Y ++F+ T + Y+ + R+ A Sbjct: 410 HNDSINKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVSYKTYLTKLRIQKA 469 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ + + I +IA +G+ F + F++ TPS +R+ Sbjct: 470 CELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRN 512 >UniRef50_UPI0001787EAC transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EAC Length = 447 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 58/105 (55%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M +I+Q I ++++H+ +PL ++ +A + S L R+F ++T + +YIR+RR+ Sbjct: 1 MQTGEIVQRAIDFVEDHLTEPLALEEIAGVAAMSLPNLYRLFHSITGHPVKEYIRKRRIS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA LR T+ P DI G+ S F + F+R TP YR Sbjct: 61 EAASCLRNTDLPTIDIGYRCGFESYPAFMKTFKRCTGLTPGAYRK 105 >UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745884 Length = 295 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 58/104 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q + ++ +I +H+ +P+N D VA + S R FR+ T +T Y+ + RL AA Sbjct: 189 QARVDRVMQFIHKHLCEPINRDQVAAIAALSPGAFSRFFRSRTGRTFPAYLNELRLGRAA 248 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L TT+ + D+A D G+ + F+R+F + TPS++R RL Sbjct: 249 RLLSTTDLRVVDVAADCGFRNLAHFNRLFLKWKGVTPSEFRKRL 292 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 57/103 (55%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + + +ID H + + +D +AK +G+SK++ R+F+ T+ T Y+ Q+R+ LA Sbjct: 179 YLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIELA 238 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L + + AM G+ + TF RVF+ + TP+++R Sbjct: 239 LTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRK 281 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 54/102 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ +I EH P+ + +A+ ++ Y R F+ +T+ +YI R+ AA Sbjct: 220 ENLKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIGKTITEYINVIRVEKAAT 279 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L TE I DIA G+ + F R F+++ TPS+YR + Sbjct: 280 ALAETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRKK 321 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 54/102 (52%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I +I+++ + L + VAK S +Y +MF+ T +Y+ + R+ A Sbjct: 223 VIARAKRYIEDNQAEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNL 282 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L + ++A ++G+ S F+RVF++ ++P++YR +L Sbjct: 283 LLNPNLRVSEVAFEVGFQSLTHFNRVFKKIVGQSPTEYREQL 324 >UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIJ9_9SPHI Length = 309 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 H K + ++ ++++H+++ L+++ +A + YS ++ R+FR+V +++L YI ++R+ Sbjct: 10 DHIKRLNKVLQFVEDHLEEELSLEKIAAIACYSPFHFHRIFRSVVNESLNVYIVRKRIEK 69 Query: 62 AA-VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA + +R I ++++ G+ +FSR F++ + +PSD+R + Sbjct: 70 AASILIRKPGISITELSVMYGFNGNTSFSRAFKKYYGMSPSDFRAQ 115 >UniRef50_C6CT66 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CT66_PAESJ Length = 262 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 52/105 (49%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +++ I +++EH+ +P+ + +A + Y +F+ T T DY+ +RR+ A Sbjct: 150 YSAPVKEAIQYLEEHLHEPVTMRDIADHLHMNASYFSVLFKEQTGLTFSDYLTRRRVQRA 209 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L T I +IA GY + + F +VFR +P YR + Sbjct: 210 KELLTNTRLSINEIAEKAGYQTAKYFVKVFRSHEGVSPGQYRKNV 254 >UniRef50_Q52620 Regulatory protein pqrA n=6 Tax=Enterobacteriaceae RepID=PQRA_PROVU Length = 122 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 43/105 (40%), Positives = 72/105 (68%), Gaps = 2/105 (1%) Query: 4 QKIIQDLIAWIDEHI--DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + ++ D++ W++ + ++ + ID +A KSGYSKW+LQR+F+ TLG+Y+R+RRLL Sbjct: 3 ENVVNDILKWLETQLQRNEGIKIDTIANKSGYSKWHLQRIFKDFKGCTLGEYVRKRRLLE 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L+ + I DIA+ G+ SQ TF+R+F++ F+ TP+ +R Sbjct: 63 AAKSLQEKDMSILDIALMYGFSSQATFTRIFKKHFNTTPAKFREN 107 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 53/102 (51%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ W+ H +PL + A +S + R FR +T Q+ ++ + RL AA Sbjct: 184 QRLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAE 243 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LRTT+ + IA G+ + F+R F+ F TP DYR + Sbjct: 244 ALRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_A4WA37 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=A4WA37_ENT38 Length = 120 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 70/107 (65%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + DL+ WID ++D L+I+ VA++SGYSKW+LQR+F+ T L YIR ++L Sbjct: 1 MNTGAFMHDLLDWIDNNLDSRLDIESVARRSGYSKWHLQRLFKEHTGYPLAGYIRAQKLQ 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + L ++ PI ++A+ LG+ SQQ+F+R F+R + + P +R + Sbjct: 61 KSVERLTHSDEPILNVAIALGFDSQQSFNRSFKRLYGQAPGAWRRSI 107 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 138 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 57/100 (57%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I +I+ ++ + ++++ VA S +YL ++F+ Y+ R++ LA L Sbjct: 244 MKAVIDYIERNLKKGISLEDVANHVNISTYYLSKIFKKEMGVNFITYVTDRKMDLAKEML 303 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 T+ P+ +IA+DL Y FS+ F+++ TPS+YR + Sbjct: 304 VNTDIPVLNIALDLAYNEANYFSKAFKKKTGLTPSEYREK 343 >UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9BU22_DELAS Length = 326 Score = 138 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + I ++ +ID H+DQPL+ +A + +S+++ R+F +TLG Y ++RRL A Sbjct: 14 YARRINRVLNYIDAHLDQPLDGAHLADIANFSRFHFHRIFAAWMGETLGSYAQRRRLEKA 73 Query: 63 AVELRT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L ++ + + A+ G+ S + F+R F+ +F TPS +R Sbjct: 74 AFRLSCGSKETVLETALATGFQSGEAFARAFKLKFGCTPSAWR 116 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 138 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 62/103 (60%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ +I ++++HI+ L++ AK + S ++ R+F+ V +T +Y R+ A Sbjct: 176 ERIKPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEK 235 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L TT+R I +IA + G+ S F+RVF+++ + P++YR ++ Sbjct: 236 LLITTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKKM 278 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 54/100 (54%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 +Q + + ++ P ++ +A+ G S W+L R F+ T + ++ +R+ A L Sbjct: 207 LQKVKQHLQANLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSEWFIHQRIQRACRLL 266 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 R T P+ DIA ++GY S FS+VFRR+ P+ YR R Sbjct: 267 RETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYRRR 306 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 54/103 (52%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + +++ +++ E+ + +++D V+K+ S +Y ++F+ + + +Y+ R+ A Sbjct: 426 ESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKAK 485 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L E I +I + GY FSR+F++ TP +YR R Sbjct: 486 ELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRER 528 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 55/100 (55%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +++ +I +H+ + ++ + +A + YL R+F+ T ++ DY+ Q+RL +AA Sbjct: 427 VVEQAKTYIHQHLAEEISREDIASHVYLNPDYLTRIFKRETGMSISDYLLQQRLRIAAEL 486 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T+ + +A +GY + FSR+F++ P +YR Sbjct: 487 LANTDLAVSAVASRIGYANFSHFSRIFKKYMGINPLEYRQ 526 >UniRef50_D2LQS1 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQS1_BACS4 Length = 301 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 62/105 (59%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + IQD +++ HI++ +NI+ + + YSK++ R+F+ V ++ +Y+++R+L Sbjct: 1 MDYLEKIQDFSDYVEAHIEEDMNINAIINQLYYSKFHFYRVFKAVVGLSVHEYVKRRKLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L T+ I IA+ G+ SQ+ F R F++ + P +R Sbjct: 61 RAADCLLHTKDSILTIALQFGFQSQEVFIRNFKKIYGVPPGKFRK 105 >UniRef50_A4BA46 Transcriptional regulator, AraC family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BA46_9GAMM Length = 293 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 60/102 (58%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + L+ +I HI +P+++D +A +S +S+W LQR+F T T+ Y+R+ +L LAA Sbjct: 8 NRLDQLLDYIHRHIHEPMSLDTLAAQSAWSRWQLQRVFVAYTGYTVAQYVRELKLSLAAD 67 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + DIA+ G+ S+ FSR F++ F +P YR R Sbjct: 68 CLLENSDRVLDIALSFGFGSEVAFSRAFKQFFKVSPHQYRKR 109 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 51/95 (53%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 + +I + ++Q + + +A+ G S+ + R F+ T Y+ Q+R+ A L+ T Sbjct: 195 VTRYIADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQT 254 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 ++ + DIA+ G+ S FSR FR+ TPS YR Sbjct: 255 QQSLVDIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 58/103 (56%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ + +I+ + ++ID++AK + SK+Y R+F+ +TH T DYI + R+ A Sbjct: 182 EKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIE 241 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 ++ T I +IA ++G+ + F +VF+ TP Y+ + Sbjct: 242 LIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_C5ERZ6 Right origin-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERZ6_9FIRM Length = 164 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++Q +++ + +I+ H+++ + +D +AK+ YSK+Y+ R+F T T+ YI+ RRL Sbjct: 19 MTNQTVVEKIADYIENHLEEDIPLDKIAKELNYSKFYIARVFADNTGHTIYKYIQGRRLT 78 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA +L T++PI +IA + Y SQQ F+ F + + TP YR Sbjct: 79 LAARKLAETDKPIVEIAYEARYGSQQAFTLAFSQFYLCTPQTYRKN 124 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 59/102 (57%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ LI +I+ H L ID +++ GYSK + +F+ T + +++ Q RL A Sbjct: 189 EKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACE 248 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + RPI +IA ++G+ + F+R F+R ++ TPS YR + Sbjct: 249 LLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKK 290 >UniRef50_UPI0001B9ECE6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECE6 Length = 519 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 57/104 (54%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +S +Q I++I EH+ Q L++ VAK + Y MF+ T Q +++ Q +L Sbjct: 411 VSTTSPVQRAISFIHEHLGQSLSLQQVAKHVHMNPNYFSEMFKKETGQNYIEFVTQAKLR 470 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A LR T I +IA ++GY + F+R+F++ TPS+YR Sbjct: 471 KAMHLLRETPAKISEIANEIGYEDIKYFNRLFKKWTGLTPSEYR 514 >UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=Firmicutes RepID=C1FU00_CLOBJ Length = 290 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 59/101 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + + +I+++I + ++++ V+K + S ++ QRMF + L +YIR+RR+ Sbjct: 7 MEWIERLNSAVNYIEKNIRETIDLEEVSKIACCSTYHFQRMFAYIADIPLSEYIRRRRMS 66 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 LAAV+L++ + DI++ GY S F+R F+ PS Sbjct: 67 LAAVDLQSGNEKVIDISLKYGYDSPTAFNRAFKSVHGIAPS 107 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 61/103 (59%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 Q+ L +I+ H + L++D +A ++G+SK++ R+F+ +T T +Y+ RRLL A Sbjct: 179 QQERFSMLCNYINAHCTEDLSLDELANEAGFSKYHFARLFKEITGTTCHNYLLGRRLLFA 238 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L PI ++AM G+ S TF+R+F+ Q TPS++R Sbjct: 239 KTLLADFSLPITEVAMRSGFNSLATFNRIFKFQIGCTPSEFRK 281 >UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35507 Length = 307 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + L+++I++H +PL ++ +A +G+SK++ R+F+ T+ T DY+ ++R+ Sbjct: 192 DYYQKFNSLLSYINDHFAEPLTLEKMADYTGFSKYHFTRLFKQHTNSTFYDYLSRKRI-Q 250 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA L TT+ I IA G+ + +F+R F++ + +PS+YR + Sbjct: 251 AAQTLLTTDASITSIAFQTGFNNSTSFTRCFKKYTNYSPSEYRTKF 296 >UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IEN8_9CLOT Length = 279 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 59/105 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + I +I+ H+ + + D +A+ + YS ++ QR F +T T+ +Y+R RRL Sbjct: 1 MDWVRSLNYAIDYIEVHLSENIVCDDIAQSAFYSSFHFQRTFSLLTGMTVSEYVRNRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL + + D+A+ GY + ++F++ FRR PS + Sbjct: 61 LAAQELLNYDSKVIDVALKYGYDTPESFAKAFRRFHGVLPSQAKK 105 >UniRef50_B9YCD3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9YCD3_9FIRM Length = 310 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +++ I + +I+EH+ D+ L+++ V GYSK++ R+F +T + YI++RR+ Sbjct: 21 DNREQISRAVDYIEEHLQDETLDLNAVTAAVGYSKYHWHRLFTALTGVPVHRYIQRRRMS 80 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L T PI IA+D GY +Q++FSR F+ + +P YR R Sbjct: 81 EAARRLVFTADPILRIALDSGYQTQRSFSRQFQAVYHCSPKRYRRR 126 >UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=Pseudomonas RepID=A5W8X4_PSEP1 Length = 291 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 52/98 (53%) Query: 8 QDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELR 67 + L+ +++ H+DQP+ ++ +A + S+++ RMFR Y+ RRL A LR Sbjct: 190 RQLVDYLEAHLDQPITLEELALRCNLSEYHFARMFRASFGLPPHQYLLARRLHRACQLLR 249 Query: 68 TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 P+ +IA+ G+ S FS FR+ TP +YR Sbjct: 250 LGVLPLGEIALLCGFASASHFSNRFRQALGATPGEYRK 287 >UniRef50_Q180J9 AraC-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q180J9_CLOD6 Length = 160 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 69/105 (65%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++ +I ++I +I+E++ + LN+D +A + YSK++L RMF V T+ YI++RRL Sbjct: 3 TNTDVIMEIIDYIEENLTENLNLDKIAYIANYSKYHLHRMFTNVVGCTIHQYIQRRRLTE 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L T++ I DIA+ +GY + Q+F+ FR + +P YR++ Sbjct: 63 AARQLIFTDKYIIDIAITVGYSTHQSFTLAFRNLYKESPQVYRNK 107 >UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PRZ9_9FIRM Length = 248 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 56/103 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++ K I + +I HI + + I+ +A + G S YL R+F+ T ++ YIRQ+++ + Sbjct: 136 TNSKHINEGKDYIYAHIKERITIEDLADELGVSPSYLSRLFKKETGMSVSAYIRQQKIEI 195 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A LR ++ + DIA L + SQ F + FR TP YR Sbjct: 196 AKNLLRFSDSSLIDIANQLAFSSQSHFIQQFREVTGMTPKKYR 238 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 49/101 (48%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +IIQ + +I H+ L++ +A S ++L +FR TL +I+ RL A Sbjct: 225 SRIIQAAVDYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEMGMTLTAFIKSLRLKKAR 284 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L + + +IA +G+ FS+ FR + PS+YR Sbjct: 285 ELLLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEYR 325 >UniRef50_C3RHZ9 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHZ9_9MOLU Length = 280 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 62/106 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + I +I+ H+ + ++ + +AK +G ++ Q+ F +T+ +L +YIR+RR+ Sbjct: 1 MEWIERLNTTIEYIENHLTEKIDYEQLAKIAGCPSYHFQKTFLYMTNISLSEYIRKRRIS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAAV+L+T E I DIA+ GY S F+R F+ PS R + Sbjct: 61 LAAVDLQTGEDKIIDIALKYGYESPTAFNRAFQAVHGIAPSLVRKK 106 >UniRef50_C6CSY2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSY2_PAESJ Length = 533 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 58/102 (56%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + +++A++D H + + + +A + YL R F+ T +Y+ ++R+ A Sbjct: 421 SNPMSEIVAYLDGHYFEDVGLIDMATRYHMDPSYLSRQFKAATGVNFIEYVTRKRMEKAC 480 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LR ++R + DIA +GY +Q+ FS+VF++ +TPS++R Sbjct: 481 ELLRESDRKVSDIAELVGYENQRYFSQVFKKFTGQTPSEFRE 522 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 1/102 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H + + ++ I+ HI +PL ++ +A ++G S+ + R+FR T +Y++ +R+ LA Sbjct: 196 HSEFVS-IVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQNKRVELA 254 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L T + + DIA +GY F VFR+ TPS YR Sbjct: 255 CQLLTGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYR 296 >UniRef50_Q17ZT7 AraC-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q17ZT7_CLOD6 Length = 306 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I + +I+EH+ +PL++D ++ +G+SK++ R+F+ + +TL Y+ + +L A Sbjct: 10 YLNRICKVQDYIEEHLHEPLSLDELSNIAGFSKFHFHRIFKAIEKETLAQYVNRLKLENA 69 Query: 63 -AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A + T+ + DIA G+ FSR F+ + +P YR+ Sbjct: 70 TAFLIHRTDMTVTDIAHYFGFTDSAVFSRAFKNYYKISPIKYRNN 114 >UniRef50_A9IAC9 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IAC9_BORPD Length = 268 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 64/105 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H+ I+++++WI+ ++ + + I+ ++ + S+ L R FR T ++L Y RR+ A Sbjct: 158 HKAKIKEIMSWIEGNLTEHITIERISDQFAISRSLLTREFRGHTGKSLVGYCNGRRVQKA 217 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A+ L TTE P+ DIA+D G+ + F R F+ +F TP+ +R ++ Sbjct: 218 AIALATTEAPVIDIALDCGFSNISHFHRQFKSRFGITPAVFRRKI 262 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 52/100 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 K I+ ++++I + + + I+ +A YSK Y + F+ + Y+ RL +AA Sbjct: 194 KKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAE 253 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L TT I DIA G+ + F+R F++++ +P YR Sbjct: 254 LLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteria RepID=A8FZF8_SHESH Length = 300 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 68/104 (65%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + ++ +I +++++ +QPLN+ VA K+ S ++ R+F+ VT++TL +Y+R+ RL Sbjct: 4 DYLQRLKPVIRYLEQNFNQPLNLPEVAAKANISPYHFHRIFKAVTNETLAEYLRRLRLER 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A +L + I ++A++ G+ S Q+ ++ F+++F TPS+ R Sbjct: 64 IATDLFYKQVSITELALENGFSSSQSLAKAFKQRFGLTPSELRE 107 >UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 Tax=Clostridium RepID=Q0TRX2_CLOP1 Length = 250 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 60/104 (57%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + +KI+ + +ID+++D+ L ++ +A S Y R+F+ T +T+ YI ++++ Sbjct: 146 NEEKIVDKVSKYIDDNMDKMLKLEELASICNLSPGYFSRVFKKETGKTVITYINEKKVER 205 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L+ ++ PI +I++DLG+ F RVF++ TP +R Sbjct: 206 AKKLLKESKDPIINISLDLGFDDCGYFIRVFKKITGLTPKAFRE 249 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 136 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +SH K ++ I++I E++DQ L + ++ G S +Y R F+ T Y+ R+ Sbjct: 199 LSHWK-LRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYVMNCRIE 257 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L +T + I I +G+ SQ F+ VFR+ TP YR ++ Sbjct: 258 RAKKLLGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQV 304 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 136 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 49/97 (50%) Query: 8 QDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELR 67 Q+++ +ID++ + + VA +S YL ++F+ YI + R+ A L Sbjct: 145 QEVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILI 204 Query: 68 TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + I +IA +GY F +VF++ + TPS+YR Sbjct: 205 NSNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYR 241 >UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE Length = 294 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 51/99 (51%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I +I+ ++ Q L+I +A + SK Y R F+ + Y+ Q+R+ A L Sbjct: 195 LKRVIDYIEANLAQDLSIFDLASLTNMSKSYFSRSFKQSVGISPYQYVIQQRVERAKQLL 254 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + I DIA+D G+ +Q ++ FR+ TP Y+ Sbjct: 255 KQQSISISDIALDCGFANQTHLTKAFRQMTGTTPKAYQK 293 >UniRef50_C8P1I3 AraC family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I3_ERYRH Length = 288 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 62/106 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + +Q+ I +I+ H+D L ++ +A S YS ++ +F +T + DY+R+RRL Sbjct: 7 MNTLEHLQNAIDYIETHLDSSLKLEDIAIHSNYSPYHFHNLFSALTGMGVMDYVRRRRLS 66 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A + + + + D+A+ Y S ++FS+ F++Q TPS+ + R Sbjct: 67 EAGMLFISQKVKVIDLAVHYDYESAESFSKAFKKQHHYTPSEIKKR 112 >UniRef50_C9XKB1 AraC-family transcriptional regulator n=18 Tax=Clostridiales RepID=C9XKB1_CLODC Length = 294 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 69/107 (64%), Gaps = 3/107 (2%) Query: 1 MSHQKIIQ--DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRR 58 MS+ K+I I +I+EH+ + L++D++A YSK++L R F T T+ DYI++R+ Sbjct: 9 MSY-KVINVITAIDYIEEHLSEKLDLDIIANAVHYSKYHLHRTFTTSVGLTMHDYIKRRK 67 Query: 59 LLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L AA L +++PI +IA+ GY SQQ F+ +F+ + ++P+ YR Sbjct: 68 LTEAAKLLVFSKKPIIEIALIAGYESQQAFTSIFKAMYKKSPNKYRK 114 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 57/104 (54%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +++IQ + +I+ + ++ +++ +A+ S Y R F+ + +Y+ + R+ A Sbjct: 194 KELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAK 253 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ T+ I DIA+ +G+ +QQ F+ +F++ TP YR + Sbjct: 254 ELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNV 297 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 56/100 (56%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ I +I EH + ++++ VA + G + YL +F + ++R+ R+ A L Sbjct: 418 IKRAINYIREHYKEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFRISHAKRLL 477 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + T+ +++IA ++GY + F+RVF+ + +P DYR + Sbjct: 478 KGTDMKVYEIAEEVGYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_B8CLS6 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CLS6_SHEPW Length = 303 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 67/101 (66%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I+ ++ +I H+DQPL+++ +A+ S S+W LQR+F+ T + Y+R+ +L +AA + Sbjct: 9 RIERVLNFIHTHLDQPLSLEDIAEHSQCSRWQLQRIFQQQTGLNVAQYVRELKLSIAADK 68 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + + + + DIA +LG+ S+ +FSR F++ F +P +Y+ R Sbjct: 69 VLSGQSRMLDIAYELGFNSEVSFSRSFKQLFGVSPREYQRR 109 >UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=Rhizobiales RepID=B2IKR9_BEII9 Length = 292 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 53/100 (53%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ +I+ + + +D +A ++ S ++ R+F+ T + Y+ RR+ A Sbjct: 188 RRLKRVLDFIEARLATDIALDDLAAEACLSPFHFSRLFKDATGLSPHRYVTDRRVQAARD 247 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +L + +IA+D G+ SQ F RVFR+ TP YR Sbjct: 248 KLALRHSSLIEIALDTGFGSQANFIRVFRKATGLTPGQYR 287 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 52/101 (51%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ + +I++H+DQ L + +A++ G S++Y R+F+ Y ++R+ A Sbjct: 209 LLNRALEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPHQYAIKQRIKKAKGL 268 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LR T PI IA G+ + S+ FR+ TP +R + Sbjct: 269 LRQTNTPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQ 309 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 55/101 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ +++++ EH ++I+ +A YSK Y + F+ + Y+ RL +AA Sbjct: 189 EKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAK 248 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L TT I +IA++ G+ + F+R F++++ TP YR Sbjct: 249 LLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRK 289 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 59/102 (57%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +Q++ +I++H + L ++ AK G+SK++ R+F+ + T +Y+ ++R+ A Sbjct: 186 YQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRVKCA 245 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L +TE I D+AM+ G+ S +F R F+ +PS++R Sbjct: 246 EGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 58/106 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 Q ++ ++ +H +PL +D +AK G S +Y+ ++F+ T +Y+ Q R+ Sbjct: 412 DEQSLMLLARDYVHDHFREPLTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRVEH 471 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L T++ + +I ++GY FSRVF++ ++PSDYR + Sbjct: 472 AKQLLSLTQKSLKEITYEIGYKDPNYFSRVFKKLTGKSPSDYRKSI 517 >UniRef50_C0Z5D7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5D7_BREBN Length = 285 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++ + I +++I++ + + + +D VA +GYSK++ QR+F VT +T+G YI +RRL Sbjct: 1 MNYMEQITYALSFIEKQLTEKVTLDEVASAAGYSKYHFQRLFFHVTGETVGQYISKRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L ++ + ++A G+ S + F+R F ++F PS R Sbjct: 61 EAAKALSLEQKSVTEVAFTYGFDSHEAFTRAFTKRFGLPPSALRR 105 >UniRef50_C6LAX2 Regulatory protein SoxS n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAX2_9FIRM Length = 167 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 D++ +I H + +++ VA + G K+ L R+F V + DY+ RL A L + Sbjct: 52 DILTYIANHYREDISLSSVAAQFGTGKFVLSRIFSNVLGVSFTDYVNSLRLSHAQHLLAS 111 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 T+R I DIA++ GY +QQTF+RVF+ +F TP ++R Sbjct: 112 TDRNILDIALECGYHNQQTFNRVFKARFSCTPKEFRK 148 >UniRef50_UPI000174581F Two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174581F Length = 268 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 58/101 (57%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ I +H+ QPL ++ VA+ SG S ++ ++F+ T T +Y+ + R+ A L Sbjct: 155 VRRARQHITQHLAQPLCLEEVARHSGVSPFHFCKIFKRFTGLTFTEYVNRARVEKAKQLL 214 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + + ++A D+G+ S F+R FRR D++P+++R + Sbjct: 215 IKPQSRVTEVAYDVGFQSLSQFNRSFRRVMDQSPTEFRSSM 255 >UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=Q31GA4_THICR Length = 288 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + + +I H++ L+++ +++ + +SK++ R F T T T+G ++ +RL A Sbjct: 9 YINRMNRVCDYILAHLNDDLSVEKLSEVACFSKFHFHRQFSTYTGMTVGKFVLMQRLKQA 68 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + +L + DIA++ + S + FSR F+ F +TPS +R Sbjct: 69 SKQLAFNQPMRVIDIALEAHFESPEAFSRAFKNTFGQTPSQFRQ 112 >UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7P5_BACCO Length = 292 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 58/103 (56%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S +K I+ + +I +HI QP+ ++ VA S +Y ++F+ T +T ++ ++++ L Sbjct: 183 SSKKEIKQALQYIQKHIHQPVTLEEVAGHVYLSPYYFSKLFKKETGETFVSFVNRQKMNL 242 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L + P+ IA LG+ FS+VF+R + TP+ YR Sbjct: 243 AKDMLANDDLPVSYIAHSLGFREISYFSKVFKRYYQTTPTSYR 285 >UniRef50_A6FWZ8 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FWZ8_9DELT Length = 318 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 6/109 (5%) Query: 1 MSHQKIIQDLIAWIDEHID----QPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQ 56 + H+K I + +I +++ + +D +A+ +G SK++ R F V T G Y+R Sbjct: 208 VGHRK-IARSVEYI-RNLEVEGPSNVTLDDLAQVAGLSKYHFLRQFSQVVGMTPGAYLRT 265 Query: 57 RRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 RL AA +LRTT+ PI ++A+ +G+ +FSR F R TPS+Y+ Sbjct: 266 LRLCHAARKLRTTDLPILEVALSVGFADHPSFSRAFARHMGMTPSEYQK 314 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 53/101 (52%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H++I+ + +I +P+++ VA + S+ Y +F+ VT DY+ RL A Sbjct: 410 HERIVLQAVRYIKARFTEPISLQEVADEVAVSRNYFSELFKRVTGHNFIDYVIDLRLKRA 469 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 L TT ++++A G+ + FS++F++ TP++Y Sbjct: 470 KELLSTTSLRVYEVADRSGFNDVKYFSKLFKKMVGMTPAEY 510 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 58/103 (56%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I+ ++ +IDEH D+ L I +A S+ + R F+++ T +YI +RL A Sbjct: 185 QIRQIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKA 244 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A LR T+R I DI+M +G+ F ++F+R TPS++R Sbjct: 245 ARLLRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 55/101 (54%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ ++ +I E+ + + ++ V+K S +YL ++F+ T DYI ++ A Sbjct: 245 LLNPVLIYISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKIEKAKQL 304 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ I +I+M LGY FS+VF++ TPS YR++ Sbjct: 305 LENTDMSIINISMSLGYDESGYFSKVFKKVVGVTPSAYRNK 345 >UniRef50_A6LY67 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LY67_CLOB8 Length = 291 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 69/104 (66%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + + D I ++++H+ + ++++ +AK+ +SK++ R+F+ V + +GDY +RRL Sbjct: 1 MNTKNYVLDAIEYLEKHLLEGVSLEQLAKQFNFSKFHYARLFKAVLGENIGDYQMKRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +AA+ L T I +IA+ GY SQ++F+R+F+ F TP DYR Sbjct: 61 IAAMSLLETRDSILNIAIMCGYSSQESFTRMFKAYFGITPKDYR 104 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 64/104 (61%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++I ++ ++D H + +++ VA + YL ++F++VT + +Y+ ++R+ Sbjct: 430 DSSQLIWHIVDYLDAHYFEDISLIDVATRFHLDPSYLSKLFKSVTSENFIEYVTRKRIEK 489 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A LR++ER I +I+ +GY +Q+ FS+VF++ +TPS+YR Sbjct: 490 ACELLRSSERKISEISELIGYENQRYFSQVFKKSTGQTPSEYRE 533 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 50/101 (49%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ +I EH PL ++ V+ G+S Y +F+ T Q +Y+ + R+ A Sbjct: 430 RPIRTAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSLFKKETGQNFLEYLSEVRMNRAKE 489 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LR T + ++ + +GY + F++ F++ P ++R Sbjct: 490 LLRETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPGEFRK 530 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 60/102 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +Q+L+ +I+ H + +++D +AK G+SK+YL R+F DYI + R+ A Sbjct: 159 YNSTMQNLLKYIEIHYHEKISLDSIAKDLGFSKFYLSRIFSNKIGYQFNDYINRLRINKA 218 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L T+ P+ IA++ G+ SQ+ F+R+F+ TP+ +R Sbjct: 219 QKLLSETDLPVTIIALECGFESQRNFNRIFKELTALTPTKFR 260 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 60/102 (58%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+D++ +I+++ ++ L++D ++++ SK+YL R+F+ + +YI + R+ A Sbjct: 184 ERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAME 243 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ + +IA + G+ + F +VF++ TP +R + Sbjct: 244 LLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2P5_PAESJ Length = 189 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 49/96 (51%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 A+I+ H + L + +A S ++LQR F+ +T T YI+Q R+ A L + Sbjct: 88 QARAYIEAHYYEQLTLSHLADVLHLSPYHLQRTFKRLTGLTPAAYIQQIRIREAMKLLAS 147 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T P+ DIA +GY + F+ F+ TP+ YR Sbjct: 148 THLPVTDIAGQVGYTNAAHFTTRFQNVTGLTPTQYR 183 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 54/100 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ I++ +PL + +A G S + R F+ +T + Y+ +RRL AA Sbjct: 269 ERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAE 328 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LR T+ I IA + G+ + F+R F++++ TP YR Sbjct: 329 NLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobacteria RepID=POCR_SALTY Length = 303 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 52/105 (49%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ + +ID H+ L ++ VA S +Y ++F+ ++ ++R++ A Sbjct: 190 HDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSA 249 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L ++ I IA +LG+ F +VFR+ + TP YR ++ Sbjct: 250 RELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQI 294 >UniRef50_B6R4C2 Transcription activator, effector binding n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4C2_9RHOB Length = 296 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + I + +I+ +I + L++ +A + +S ++ R+FR +T +T+ + + R+ A Sbjct: 11 YTQRINRAMDYIERNICEELSLAQIADAACFSPYHFHRIFRAMTGETVNQFTSRLRVEKA 70 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L+ I D A+D+G+ S TF+R F+ +F S +R Sbjct: 71 ARRLKQNPSISITDAALDMGFASPSTFARSFQARFGMPASQWRR 114 >UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales RepID=A8I184_AZOC5 Length = 310 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 50/100 (50%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I +I++++ +++ ++ + S + R FR+ +I RL A L Sbjct: 208 MRRVIDYINDNLASEISLSDLSDIACLSHHHFARAFRSAVGVPPHRFISSLRLQRAQEML 267 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 T+ + +IA + SQ TF+R FRR +P +YR + Sbjct: 268 AHTQSSLTEIAYSCRFSSQSTFTRAFRRHVGMSPGEYRRK 307 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 50/99 (50%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 II +I ++ + ++++ VA+ G S +Y ++F+ +Y+ R+ A Sbjct: 424 IITRAQDYIRQNFRKDISLEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRL 483 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L E I + +D GY + FSR+F++ TP+++R Sbjct: 484 LSERELSIKQVCVDSGYANPNYFSRIFKKWVGITPTEFR 522 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 54/103 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++ ++ +IDEH+ L + +A+ + S+ + R F+ +TH+ Y+ +RR+ AA Sbjct: 191 DTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAAD 250 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ R I I MDLG+ F +VFR TP YR L Sbjct: 251 LLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 293 >UniRef50_C7IHL6 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHL6_9CLOT Length = 290 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 60/104 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + + I ++++++ ++ D VA+K+ S ++ QRMF +T L +YIR+RRL Sbjct: 1 MNWLDKMNEAICYVEDNLAGEIDFDEVARKACCSTYHFQRMFSFITEVPLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LAA EL+ + + ++A GY S F+R F+ TP+ R Sbjct: 61 LAAFELQNSSVKVIELAFKYGYESPDAFTRAFQNLHGVTPTSAR 104 >UniRef50_Q1GMI1 Transcriptional regulator, AraC family n=6 Tax=Rhodobacteraceae RepID=Q1GMI1_SILST Length = 277 Score = 135 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 60/105 (57%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S++ I ++ +I ++ L++D +A + S+++ R+FR +T +T G +R+ RL Sbjct: 4 SYEDRILRVLRYIHDNPAGDLSLDRLADVAAMSRFHWHRVFRALTGETCGQSVRRIRLHR 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AAV L ++ I +IA +GY S+ +FSR F + P +R + Sbjct: 64 AAVALAHSDASIEEIAATVGYPSRHSFSRAFTAAYGDAPGAFRAK 108 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 135 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 50/102 (49%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 +IIQ++ +I EH L+++ VA K S+ YL + F+T T +YI R+ A Sbjct: 173 RIIQEVATYIYEHYADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACN 232 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T + I DIA + G+ F FR+ +P YR Sbjct: 233 LLLETNKSITDIAFECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1I0_9CAUL Length = 301 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 49/99 (49%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + +Q ++ +I+++I+ L I+ +A + S ++ R F+ Y+ RR+ A Sbjct: 199 RRLQRVLDFIEDNIEAALGIEDLAAIACLSPFHFARAFKVAMGVPPHRYVAGRRMSRAKS 258 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 L P+ +IA G+ S +F R F+R +P+ Y Sbjct: 259 LLAGGAVPVAEIAYRCGFSSVSSFGRAFKRASGVSPAAY 297 >UniRef50_B5WD53 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=B5WD53_9BURK Length = 416 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 56/97 (57%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 ++ I +H+D+PL+I +A+ + S ++ R+++ + +T+ +R+ RL AA L + Sbjct: 1 MLDHIYDHLDEPLDIGRLAEIACLSPYHWHRIYQAMYGETVATTVRRLRLHRAAGFLANS 60 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 PI IA GY S Q+FSR FR F P+ YR + Sbjct: 61 SMPIAQIAERSGYSSLQSFSRTFRAVFGVPPAQYRSQ 97 >UniRef50_P96662 Uncharacterized HTH-type transcriptional regulator ydeE n=105 Tax=Firmicutes RepID=YDEE_BACSU Length = 290 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 58/104 (55%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M K + + +I+E++ ++ AK + S+++ +RMF + +L +YIR+RRL Sbjct: 1 MDLLKSMNRALKYIEENLTNDIDFQEAAKLAFCSEYHFKRMFSFLAGISLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LAA EL+ + + DIA+ GY S +F+R F+ PS R Sbjct: 61 LAAFELKDSNVKVIDIAIKYGYNSPDSFARAFQNLHGINPSKAR 104 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 52/103 (50%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +I +I+ + Q L ++ VA++ S Y ++F+ DY+ + RL A Sbjct: 435 NSSLIDRASKYIEANFSQDLTLEEVARQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAA 494 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T+ P+ +IA +GY + F +VF++Q TPS +R Sbjct: 495 RELLLNTKLPVAEIATRVGYRDARYFGQVFKKQEGYTPSVFRK 537 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 54/100 (54%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + L+ +I +H P+ + VA++ ++ YL F + + +Y+ + RL A L Sbjct: 416 MDRLLEYIQDHYADPITLTGVARQFHFNASYLSSYFASYNGEGFSEYLNKIRLEKAMELL 475 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 TTE I +I+ +GY Q F++VF++Q +PS +R + Sbjct: 476 LTTELTISEISASVGYSDQSYFTKVFKKQTGISPSQFRRQ 515 >UniRef50_A9KRP2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=A9KRP2_CLOPH Length = 292 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 59/105 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M K ++I +I++++ ++ D +++ +G S + QRMF + + L +YIR RRL Sbjct: 1 MDWIKKFNEVIKYIEDNLKGEISYDTISQIAGCSIYNFQRMFSYIADKPLSEYIRNRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA ++ ++ I DI+ GY SQ FSR FR PS R+ Sbjct: 61 LAAFDIMNSKDRIIDISFKYGYESQDAFSRAFRSFHGVLPSAARN 105 >UniRef50_A7VR09 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR09_9CLOT Length = 568 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 54/106 (50%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + ++ +I EHI Q L+++ +A+ S + R F+ +TL +I + ++ Sbjct: 454 TSSDFVERTKEYIFEHIGQDLSLEDIAEHFYLSPSHFSRTFKAQAGETLIRFISRCKMEY 513 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA L T I+D+ +GY S + F+++F+ PS YR R+ Sbjct: 514 AAQLLSNTNLKIYDVCEQVGYKSLRHFNKLFKAYTGMQPSGYRQRM 559 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 54/96 (56%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 + +I+EH +PL+++ VA +G+SK++ R+F+ T Y+ Q+R+ A L Sbjct: 186 ICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDK 245 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + DI++ G+ + +F R+FR+ TP++ R Sbjct: 246 NLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRK 281 >UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDY5_9LACT Length = 512 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 57/105 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + IQ +I +ID H + L+ +A S +L R+F+ T +TL YI +R+ Sbjct: 405 NQKNSIQRIIEYIDHHYKEDLSRSTLADMVYLSADHLARIFKKETGETLVKYITDKRINA 464 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + L T+ PI +A ++GY + F+++F+ + +P DYR + Sbjct: 465 SKELLSETKTPIAQVASEVGYDNYSYFTKIFKEKIGVSPGDYRKQ 509 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 53/99 (53%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I ++E + + ++ +A+ S+++ RMF+ T + Y R+ A L Sbjct: 278 LRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIGLRMARARQLL 337 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 T R I DI +++GY S FS+VFRR+ TPS YR Sbjct: 338 LETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPSIYRQ 376 >UniRef50_C0D9U5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9U5_9CLOT Length = 142 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 38/105 (36%), Positives = 65/105 (61%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + I++ +I +I+ +++ L+++ +A +GYS+++L R+F T T+ Y++ RRL Sbjct: 3 TQRDIVRQVITYIESNLEGDLDLEKIAASAGYSRFHLNRIFAGETGCTIYKYLQARRLTS 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L T PI IA + GY SQQ FS F+R + +P YR R Sbjct: 63 AAEKLAKTHTPIAQIACESGYSSQQAFSLAFKRAYLCSPKVYRDR 107 >UniRef50_A9KJQ6 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KJQ6_CLOPH Length = 265 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 59/105 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M QK + I +I++++ +N+ A G S W QR+F +TH L +YIRQR+L Sbjct: 1 MDWQKGMNSAIDYIEKNLTGNVNVRTAAGFVGCSTWEFQRIFSFLTHIPLSEYIRQRKLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA E++ + I DIA+ GY S FSR F + F PS R+ Sbjct: 61 LAAQEIKDNDVKIIDIALKYGYESPAAFSRAFNKLFGIAPSSVRN 105 >UniRef50_B3CE13 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CE13_9BACE Length = 283 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 62/102 (60%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 HQ++I +I +I H+ + L ++++A + S ++ R+F++ +TL YI ++R+ Sbjct: 8 GHQELINQVIDYIHTHLHKALTLEMLAAEMHMSVYHFHRLFKSHLQETLSAYITRQRMER 67 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A + L+T + + +++ +GY + Q+FS+ F+R F +P + Sbjct: 68 AVMYLQTRDLSLQELSEKMGYDTAQSFSKAFKRYFGVSPVAF 109 >UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B1U3_9CHRO Length = 298 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 53/103 (51%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K ++ + +I E + Q +++ ++ + S+++ R F+ +T T Y+ ++R+ A Sbjct: 196 SKRLKPVFDYIHEFLSQDISLSTLSSIANMSQYHFSRTFKEMTGLTPHQYVIRQRVERAK 255 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L ++ I D+A+ G+ Q R F+R TPS +R + Sbjct: 256 QLLLQSKMSINDVAIACGFTHQSHLHRHFKRLIGVTPSAFREK 298 >UniRef50_UPI0001789679 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789679 Length = 289 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 57/104 (54%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+H +II+ + I+E+++QPL++ VA SK+Y R+F + +L YI RRL Sbjct: 1 MNHHRIIEQALIHIEENLEQPLSVSSVALTFNMSKYYFHRLFSAMMGCSLNQYILSRRLN 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A + + DIA L + +Q +F+R F++ + PS R Sbjct: 61 AALSLIHNNNLSLTDIAYQLAFGTQASFTRAFKQHYGVAPSSLR 104 >UniRef50_UPI000178A7F3 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A7F3 Length = 349 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 58/106 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + ++ +++ A+I+ ++ + L++D VA G + Y ++F+ +T +T Y ++R+ Sbjct: 241 NAKEPVEEAKAYIERNLSRDLSLDEVADMLGLNPSYFSQLFKQMTDETFVHYRIKKRMEK 300 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L I DI+ ++GY F++ F++ TPS+YR L Sbjct: 301 AKKLLAIPHYKITDISFEVGYADHPHFTKTFKKVTGYTPSEYREML 346 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 63/105 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + ++ +I E+ Q L+ID+++ K S YL R F+ T+ +YI RL + Sbjct: 180 YLDRLTEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKS 239 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +L T++ I +IA++ G+ ++++F++VF+ ++ TP+ YR ++ Sbjct: 240 YRDLMNTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKI 284 >UniRef50_UPI0001C36936 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36936 Length = 527 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S +I + +I EH + + + +A+ YL R+F+ QT +Y+ R+ + Sbjct: 411 SRSPVIDRALVYIREHYSENITLQSLAEDIYLHPVYLSRLFKEKVGQTFLEYLTHYRIEM 470 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A LR I+DI +GY + Q FSRVF+ TP +R L Sbjct: 471 AKDYLRNPNLRIYDIGQMVGYETPQYFSRVFKELTGTTPKGFREEL 516 >UniRef50_A8GHJ0 Transcriptional regulator, AraC family n=1 Tax=Serratia proteamaculans 568 RepID=A8GHJ0_SERP5 Length = 140 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 45/100 (45%), Positives = 67/100 (67%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I +++ WI+ ++ LNI +AKKSGYS++++QR+F+ TL YIR RR+ AA+ Sbjct: 8 FINEMLKWIEGNLGAELNIKTIAKKSGYSRFHIQRLFKLHAGLTLAQYIRMRRVTEAAIA 67 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LR T+R I DIA+D G+ SQQ F+R F++Q TP + R Sbjct: 68 LRFTDRKIMDIALDYGFDSQQVFTRTFKKQLKTTPGELRR 107 >UniRef50_C6CVB2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVB2_PAESJ Length = 542 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 61/103 (59%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +H I++ + ++ID ++ + +++ +A YL ++++ T + L +Y+ + R+ Sbjct: 433 NHSTIVRAVRSFIDANLAKDVSLPAIADHVHLHPVYLSKIYKAETGEPLTEYVYRLRMEK 492 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA LRTT +F+I+ +GY + F RVF++ FD TP +YR Sbjct: 493 AAFLLRTTPSKVFEISEIVGYNNTAYFIRVFKKFFDVTPQEYR 535 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 53/103 (51%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++ ++ +ID H+ L + +A+ + S+ + R F+ +TH+ Y+ +RR+ AA Sbjct: 235 DTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAAD 294 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ R I I MDLG+ F +VFR TP YR L Sbjct: 295 LLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 337 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 47/96 (48%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 + A+ID H + + + +A + ++ +YL FR + YI +RR+ A L T Sbjct: 143 VKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREHIGYSPMQYIIRRRIGEAQNLLIGT 202 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +R I +IA GY + F VF+R TP YR Sbjct: 203 DRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRR 238 >UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=Q13QC7_BURXL Length = 307 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 55/102 (53%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ + +I ++ L I +A ++G S ++ R+FR T +T ++ + RL AA Sbjct: 205 RRIRRVTDYIRANLAGDLAISELAAQAGLSSFHFARVFRRETRETPHRFVTRLRLEEAAR 264 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T++ + IA+ +G+ + FS F+R + TP YR R Sbjct: 265 LLHATDQTVLQIALAVGFENASHFSVQFKRDYGVTPLAYRLR 306 Score = 39.4 bits (92), Expect = 0.036, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 57 RRLLLAAVELRT---TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 RR+ +R + I ++A G S F+RVFRR+ TP + RL Sbjct: 205 RRIRRVTDYIRANLAGDLAISELAAQAGLSSF-HFARVFRRETRETPHRFVTRL 257 >UniRef50_Q17ZV7 AraC-family transcriptional regulator n=7 Tax=Bacteria RepID=Q17ZV7_CLOD6 Length = 289 Score = 134 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 41/100 (41%), Positives = 73/100 (73%), Gaps = 1/100 (1%) Query: 7 IQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I+ + +I++H+ D+ L+++V++K+ GYSK++L RMF +V ++ +YI++RRL AA Sbjct: 8 IEKTLDYIEKHLLDEMLDLNVISKEIGYSKYHLHRMFTSVVGFSVHNYIQRRRLTEAARM 67 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L TE+PI +IA+ GY +Q++FSR F++ F R+P+ +R Sbjct: 68 LIFTEKPIIEIALISGYDTQRSFSRGFKKMFKRSPNFFRR 107 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 134 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 52/102 (50%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S + + I +I + +++D +AK G S+ +L R+F Q+ DY+ R+ Sbjct: 170 SSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYRVFMANVGQSPIDYLTNYRISE 229 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A L+ + I +IA+ +G+ Q FSRVF++ PS Y Sbjct: 230 ACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_A8UPH5 Transcriptional regulator, AraC-type n=3 Tax=Flavobacteriales RepID=A8UPH5_9FLAO Length = 287 Score = 134 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 61/104 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +Q+ + +I +I ++D ++I ++A+ S +S ++ R+ R + + +G YI + R+ A Sbjct: 11 YQQNLNRVIDFIHNNLDSKIDIALLAELSHFSPYHFHRITRALLGEPIGAYITRARIETA 70 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR +E I IA +G+ + + S+ F+ F +PS +R++ Sbjct: 71 AKLLRYSENSIEQIAYKVGFETPSSLSKAFKNHFGISPSAHRNK 114 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 134 bits (339), Expect = 9e-31, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 55/106 (51%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S ++Q + ++++ + ++++ A+ S +Y ++F+ T + DY+ + R+ Sbjct: 415 SRSHVLQRALLFVNQRFKEEISMEQTAEYVNLSPYYFSKLFKLQTGENFSDYLTRLRIEE 474 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A + + +I ++GY FSRVF++ TPS+YR ++ Sbjct: 475 AKRLIAGRSLSLKEICYEVGYKDPNYFSRVFKKSVGITPSEYRQQI 520 Score = 40.6 bits (95), Expect = 0.015, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 20 QPLNIDVVAKKSGY-SKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + L++ + + GY Y R+F+ T +Y +Q + Sbjct: 482 RSLSLKEICYEVGYKDPNYFSRVFKKSVGITPSEYRQQIEIE 523 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 50/99 (50%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I +I +I+++ ++ + +D VAK+ S Y + F+ T + DY+ R+ A Sbjct: 426 FIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFIDYLTNLRVTKAKEL 485 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L I ++ +GY FS++F++ TP++YR Sbjct: 486 LEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEYR 524 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + +IQ A+I+++ + +++++VA + S + +F T T +Y+ + R+ Sbjct: 436 YDNLIQHAKAYIEDNYNHEDISLNMVASEVNLSSSHFSTVFGQETGVTFVEYLTKVRMDK 495 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LRTT +IA ++G+ FS +F++ TP +YR+R Sbjct: 496 AKQLLRTTGTKTTEIAFEVGFRDAHYFSNLFKKTQGCTPREYRNR 540 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 57/103 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ +++++++I + + L I+ ++ +S+ + F+ T +YI R+ AA Sbjct: 162 EEKLKEVLSYIQSNYRETLTIEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAA 221 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +L TER + DIAM+ G+ + F++VF+ +F TP YR Sbjct: 222 ADLVETERQVMDIAMENGFRNISYFNKVFKERFGVTPGSYRKN 264 >UniRef50_A1ZNF5 Transcriptional regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZNF5_9SPHI Length = 469 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 65/102 (63%), Gaps = 1/102 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL- 61 + + + ++ +I+++++ L+++ ++KK+ YS ++ R+F T+ + L Y+ ++R+ Sbjct: 10 YIRRVNFVLDFIEKNLEADLSLESLSKKAYYSPYHFHRVFSTIVGENLNQYVNRKRIERI 69 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A++ L ++ PI ++A G+ S+ +FSR F++ + +P+ + Sbjct: 70 ASILLIRSDTPIKELAYIYGFNSESSFSRAFKKYYGISPTRF 111 >UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HPW1_9RHOB Length = 273 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 53/101 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 I +I +I L++D +A + S+++ R+F + + IR R+ A + Sbjct: 2 DRILRVIDYIHTQAADDLSLDQLADVAAMSRFHWHRVFTAIMGASPAQIIRSVRMHKATM 61 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T+ PI IA +GY + ++FSR F+ + +TP+ +R+ Sbjct: 62 LLLRTDLPIAQIAAHVGYSNDRSFSRTFKDIYGQTPTAFRN 102 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 50/103 (48%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S + I + +I+++ ++P+ + VA S+ FR T+ T DYI R+ Sbjct: 176 SKSRRIAKVCDYIEKNFEEPIKLGDVAALVNMSESAFSHFFRKKTNCTFIDYINNLRVAR 235 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L T + +I G+ + F R+F+++ TPS+YR Sbjct: 236 ACQMLTETSHTVAEICYSCGFNNLSNFIRIFKKKKGNTPSEYR 278 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 48/102 (47%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + ++ +I+ H + L ++ A+ S +Y ++F+ T D++ R+ A Sbjct: 422 KDMLYKAKEYIEAHYAEALTLESAAEYVDLSPFYFSKLFKDRFGMTFIDFVTDVRIRKAK 481 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ + +I +GY FSRVF++ +P++YR Sbjct: 482 HFLKEGSLSLKEICYSIGYKDPNYFSRVFKKHTGLSPTEYRK 523 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 53/104 (50%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + I++ ++ +I+E+ ++ + + +++ + Y R+F+ T +Y+ + R+ Sbjct: 422 NENNIVERVVKYINENFEKEIRLKELSQTIYLNPEYFSRLFKKEVGCTYAEYLTRIRIEA 481 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L I +IA +GY FS+VF++ +PS++R Sbjct: 482 AKKYLANPSLTISEIARKVGYQDANYFSKVFKKVVGISPSEFRK 525 >UniRef50_Q18AY3 AraC-family transcriptional regulator n=15 Tax=Bacteria RepID=Q18AY3_CLOD6 Length = 288 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 57/106 (53%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I +I+E+++ ++ AK + S ++ QRMF + L +YIR+RR+ Sbjct: 1 MEWINKLNQAITYIEENLESGVDYAEAAKIACCSTFHFQRMFSYIAEVPLSEYIRRRRMT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA EL+ + I +++ GY S +F+R F+ + +PS R + Sbjct: 61 KAAFELQNSNIKILELSEKYGYDSPTSFNRAFQNIHNISPSAARAK 106 >UniRef50_A7JZZ4 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7JZZ4_VIBSE Length = 310 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 62/101 (61%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 I ++ +I ++D L++D ++K S +S+W LQR+F+ T ++ YIR+ +L LAA Sbjct: 12 NRIHSVLDYIHNNLDIALSVDEISKASCWSRWQLQRVFQQHTGVSVAHYIRELKLSLAAE 71 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T DIA+++G+ S+ FSR F+ F ++P DYR Sbjct: 72 RLIHTSDRSLDIAIEMGFASEHAFSRAFKNMFSKSPRDYRK 112 >UniRef50_A6TN59 Helix-turn-helix-domain containing protein, AraC type n=7 Tax=Clostridia RepID=A6TN59_ALKMQ Length = 303 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 59/99 (59%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 +Q + +I+++++ P+ + +AK +GYS+W+ R+F+ +T + +Y+R RL AA+ Sbjct: 8 NAVQRMQDYIEQNLNCPITLSDLAKVAGYSQWHSARIFKELTGKAPFEYMRALRLTKAAL 67 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 LR + D+A D + S + F+R F +QF +P Y Sbjct: 68 LLRDKRTKVIDVAFDFVFDSHEGFTRAFSKQFGVSPKKY 106 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 52/103 (50%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K IQ + +I+ H + L+++ VA + Y R F+ T QT +Y+ RL + Sbjct: 398 SKNIQLAVEYINAHYAEQLSLEQVAASVYLNPDYFSRAFKMETGQTFVNYLTDVRLSRSV 457 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T + IA +GY + FS +F++++ +P +YR + Sbjct: 458 WLLENTALRVQMIAQQVGYYNASYFSTIFKKKYGMSPYEYRRK 500 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 54/102 (52%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ I++ I +ID+ + +++ VA+ + Y +F+ T +Y+ +RR+ A Sbjct: 153 REPIREAIQFIDQRLKDDISLKDVAEHVHLNPSYFSTLFKEQMQLTFSEYLTRRRMQRAK 212 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L TT+ + +IA + GY + + F +F+ +TPS YR Sbjct: 213 ELLMTTDMTVAEIAEECGYRTAKYFIHLFKEMEGKTPSSYRK 254 >UniRef50_B1KWH9 Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=B1KWH9_CLOBM Length = 302 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 60/105 (57%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL- 61 + I L +I+ ++ + ++ +A+ SG+SK++ R+F++ T +T+ Y+ + +L L Sbjct: 10 YINRIYKLQDYIENNLYETHTLEKLAQVSGFSKYHFHRIFKSATKETVFQYVTRTKLELV 69 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A+ + + I D+A G+ FSR F++ +D +P ++R + Sbjct: 70 ASTLIARPDLSITDVAYQFGFSDSAVFSRTFKKYYDMSPREFRKQ 114 >UniRef50_C8N9B6 AraC family transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9B6_9GAMM Length = 263 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 57/104 (54%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +++ + +++ H +++ +A +G S W+ R++R V +TL ++ RL A Sbjct: 6 YEQRFLRALHYLENHYTDSIDLQRIADAAGLSPWHWHRLYRDVMGETLHTTVKWMRLHRA 65 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A + T++P DIA + GY + Q+F+R FR + +P YR R Sbjct: 66 AWLISYTDKPFADIARECGYNNAQSFARSFRDAYGLSPQQYRER 109 >UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C647_ACAM1 Length = 204 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 53/101 (52%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q+ + ++ +ID H+ + + +A S+++ R+F+ ++ Y+ +R+ A Sbjct: 102 QRQLLKVLDYIDAHLGNEITLADLAVLVDISQFHFGRLFKQSLGRSPYQYLMLQRVERAK 161 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+ T +PI +IA++ G+ S F R FR+ TP YR Sbjct: 162 TLLKRTNQPIVEIALECGFNSHSQFGRKFRQMTGMTPKVYR 202 >UniRef50_Q5WCU8 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU8_BACSK Length = 187 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Query: 1 MSH-QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 MS +K +Q ++++I+ H + L ++ + + SK++L ++F+ +T T+ Y+ QRR+ Sbjct: 77 MSQKEKTVQAVVSFIESHYHEHLGLETIEEALHVSKYHLSKVFKEMTGVTIFKYLYQRRV 136 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +EL ++ I DI +G+ F++VF++ TP+ Y+ + Sbjct: 137 NQAKIELLVSDASITDICYQVGFHYPSHFTKVFKQFTGITPAQYKRQ 183 >UniRef50_UPI0001973804 AraC-family transcriptional regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973804 Length = 329 Score = 133 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 60/99 (60%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I+ + + +I+E++D L++ VA SK++L R F T+ DY+R+R+L AA Sbjct: 51 IVSEALFYIEENLDSRLDLQTVASALHCSKYHLHRSFAKTAGLTIHDYVRRRQLTEAARL 110 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L +++P+ +IA+ GY SQQ F+ F+ + TP +YR Sbjct: 111 LVFSKKPVIEIALMSGYESQQAFAGSFKSMYKMTPGEYR 149 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 133 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 57/103 (55%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++ +I I + P+ + +A S+ R F+++T QT DYI R+ AA Sbjct: 193 DRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAE 252 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LR ER I DIA+++G+ + F RVFR+ + +PS++R RL Sbjct: 253 LLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRL 295 >UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4S9_ACAM1 Length = 261 Score = 133 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 49/103 (47%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K +++++ +ID ++DQ + + +A S+ + MF+ Y+ QRR+ A Sbjct: 156 SKRLRNVLDYIDANLDQNMGLADLAAVVDLSQHHFSSMFKESMGVPPYRYVLQRRIQQAK 215 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L+ I DIA+ G+ Q ++ FR+ TP YR Sbjct: 216 QLLKNDSLSITDIALTCGFADQSHMTKHFRKTVGITPKTYREN 258 >UniRef50_B0SZN8 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=B0SZN8_CAUSK Length = 296 Score = 133 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +Q ++ ID H+D L+++ ++ + +SK++ R F+ +L Y++ RL A Sbjct: 11 YHARMQRVLDHIDRHLDGDLDLEAMSSVAAFSKFHFHRQFKATFGVSLHRYVQLARLRRA 70 Query: 63 AVELRTTE-RPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + L + + + DIA+D GY + F+R FR++F ++PS +R Sbjct: 71 SKRLADGQGQSVTDIALDAGYETPDAFARAFRQRFAQSPSRFRK 114 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 57/104 (54%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +I+Q++ +I EH + +N++ +A + S YL +F+ T + Y+ R+ A Sbjct: 403 SRIVQEIKRYIQEHYAENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAK 462 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L + I+++A GY S + F RVF+++ TP +YR+++ Sbjct: 463 KYLMQFDLKIYEVAELTGYASPKQFIRVFKKEVGVTPGEYRNQV 506 >UniRef50_B0N339 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N339_9FIRM Length = 211 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ I + + +I+EH+ + + I VA ++ S +Y Q+ FR + ++ +YIR RRL Sbjct: 1 MNWTDGISNALKYIEEHLKEDIKIVDVANEAYVSSFYFQKAFRILCGFSVAEYIRYRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LA E+ TT + I +IA++ GY S +F++ F R TP+ R Sbjct: 61 LAGSEVITTNKKIIEIALEYGYDSPDSFTKAFTRFHGVTPTVARK 105 >UniRef50_C5BDV7 Transcriptional regulator, AraC family n=45 Tax=Enterobacteriaceae RepID=C5BDV7_EDWI9 Length = 132 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 4/108 (3%) Query: 1 MSHQK----IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQ 56 M+ Q+ ++ L WI+ H+ + + +D +A+ SGYS W++Q++FR T +LG YIR Sbjct: 1 MTQQQRNAALVCALSEWIERHLGRDIYLDELARYSGYSLWHMQKIFRETTGMSLGRYIRL 60 Query: 57 RRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 R+L AA LR ++ I DIA+ G+ SQ F+ +FR+ F TP+ YR Sbjct: 61 RKLTGAARRLRHSDEGIIDIALCYGFASQSHFTYMFRKHFGMTPTRYR 108 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 48/98 (48%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++++++ +I+ H + + + +A+ +G S Y F +T +T DY+ R+ A Sbjct: 182 LLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCL 241 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 L I DIAM G+ F+R F++ +P Y Sbjct: 242 LAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQY 279 >UniRef50_Q2BBL2 Transcriptional regulator, AraC family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BBL2_9BACI Length = 311 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I ++ +ID+H+ L ++ +AK S YS ++ QR+F++ ++ YI++ RL AA L Sbjct: 10 ITKVLEYIDQHLQDTLPLEKLAKVSTYSPFHFQRIFKSFMGESPAAYIKRLRLENAAHLL 69 Query: 67 RTT-ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 E PI ++A+ G+ S F+ F+ F +P +R Sbjct: 70 IYEREIPITEVALMCGFSSISYFTYSFKENFSTSPKKWRE 109 >UniRef50_C9NSN9 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSN9_9VIBR Length = 284 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 I +I++H+ +++ +A S YS ++ R+F+ + T +Y+R+RRL +AA L T Sbjct: 6 KSIEYIEQHLYDKISVHQIAAASHYSTYHYSRVFKALVGDTPKEYLRKRRLTMAAKRLLT 65 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 E I D+AMD + SQ+ F+R F+ F+ TP+ YR Sbjct: 66 EEVGILDLAMDCQFDSQEAFTRAFKALFNMTPAQYRK 102 Score = 40.2 bits (94), Expect = 0.023, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 17/70 (24%) Query: 38 LQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFD 97 +QR F+++ +YI Q + + IA Y + +SRVF+ Sbjct: 1 MQRFFKSI------EYIEQH---------LYDKISVHQIAAASHYSTY-HYSRVFKALVG 44 Query: 98 RTPSDY-RHR 106 TP +Y R R Sbjct: 45 DTPKEYLRKR 54 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 163 1e-39 UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1... 162 4e-39 UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1... 155 3e-37 UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Pa... 155 4e-37 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 154 6e-37 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 154 8e-37 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 151 6e-36 UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=D... 151 8e-36 UniRef50_A8FAK8 Possible AraC family transcriptional regulator n... 151 8e-36 UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=... 150 1e-35 UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus ... 150 1e-35 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 149 3e-35 UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=C... 149 3e-35 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 149 3e-35 UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 ... 148 4e-35 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 148 4e-35 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 148 5e-35 UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerot... 148 6e-35 UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=B... 147 7e-35 UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides R... 147 1e-34 UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobact... 146 1e-34 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 146 2e-34 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 146 2e-34 UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Des... 146 2e-34 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 146 2e-34 UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia... 146 2e-34 UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC... 146 2e-34 UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio ... 146 3e-34 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 146 3e-34 UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterob... 146 3e-34 UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=S... 146 3e-34 UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=S... 146 3e-34 UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curviba... 146 3e-34 UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria ... 145 3e-34 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 145 4e-34 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 145 4e-34 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 145 4e-34 UniRef50_UPI0001B9ECE6 two component transcriptional regulator, ... 145 4e-34 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 144 5e-34 UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonu... 144 6e-34 UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B... 144 7e-34 UniRef50_C6CT66 Two component transcriptional regulator, AraC fa... 144 7e-34 UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=... 144 7e-34 UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostri... 144 7e-34 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 144 7e-34 UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2... 144 8e-34 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 144 8e-34 UniRef50_C6CSY2 Two component transcriptional regulator, AraC fa... 144 8e-34 UniRef50_C6CVD2 Two component transcriptional regulator, AraC fa... 144 9e-34 UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=C... 144 9e-34 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 144 9e-34 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 144 1e-33 UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostri... 144 1e-33 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 143 1e-33 UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=... 143 1e-33 UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=... 143 1e-33 UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n... 143 2e-33 UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular or... 143 2e-33 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 143 2e-33 UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=De... 143 2e-33 UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=D... 142 2e-33 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 142 3e-33 UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family pr... 142 3e-33 UniRef50_C6D5X4 Two component transcriptional regulator, AraC fa... 142 3e-33 UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobac... 142 3e-33 UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n... 142 4e-33 UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Ba... 142 4e-33 UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=... 142 4e-33 UniRef50_Q2RGN4 Two component transcriptional regulator, AraC fa... 142 4e-33 UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=R... 142 4e-33 UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=B... 142 4e-33 UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=D... 142 4e-33 UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC ... 142 4e-33 UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) pro... 142 4e-33 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 142 4e-33 UniRef50_UPI000178A7F3 two component transcriptional regulator, ... 142 4e-33 UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verruco... 142 5e-33 UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=D... 141 5e-33 UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=A... 141 5e-33 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 141 5e-33 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 141 5e-33 UniRef50_A7VR09 Putative uncharacterized protein n=1 Tax=Clostri... 141 5e-33 UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. ... 141 6e-33 UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwa... 141 6e-33 UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio ... 141 6e-33 UniRef50_C6D8S9 Two component transcriptional regulator, AraC fa... 141 6e-33 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 141 7e-33 UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicu... 141 7e-33 UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=... 141 8e-33 UniRef50_UPI0001C36936 two component transcriptional regulator, ... 141 8e-33 UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=C... 141 9e-33 UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=... 141 9e-33 UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=D... 141 9e-33 UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobact... 141 9e-33 UniRef50_C6D127 Two component transcriptional regulator, AraC fa... 141 9e-33 UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n... 141 1e-32 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 140 1e-32 UniRef50_UPI0001788F54 two component transcriptional regulator, ... 140 1e-32 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 140 1e-32 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 140 1e-32 UniRef50_UPI0001788A43 two component transcriptional regulator, ... 140 1e-32 UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=A... 140 1e-32 UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 T... 140 1e-32 UniRef50_A9KJM4 Two component transcriptional regulator, AraC fa... 140 1e-32 UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1... 140 1e-32 UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=... 140 1e-32 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 140 1e-32 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 140 1e-32 UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostri... 140 1e-32 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 140 1e-32 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 140 2e-32 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 140 2e-32 UniRef50_A5G651 Two component transcriptional regulator, AraC fa... 140 2e-32 UniRef50_C7GGB1 Putative two-component response regulator n=1 Ta... 140 2e-32 UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=D... 140 2e-32 UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=D... 140 2e-32 UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=... 139 2e-32 UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryante... 139 2e-32 UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostri... 139 2e-32 UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Ba... 139 2e-32 UniRef50_B6R4C2 Transcription activator, effector binding n=1 Ta... 139 2e-32 UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostri... 139 2e-32 UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=E... 139 2e-32 UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Ple... 139 2e-32 UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 T... 139 2e-32 UniRef50_UPI000174581F Two-component response regulator n=1 Tax=... 139 2e-32 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 139 2e-32 UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reineke... 139 3e-32 UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostri... 139 3e-32 UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=C... 139 3e-32 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 139 3e-32 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 139 3e-32 UniRef50_UPI000178A004 two component transcriptional regulator, ... 139 3e-32 UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=... 139 3e-32 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 139 3e-32 UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=B... 139 3e-32 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 139 3e-32 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 139 3e-32 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 139 3e-32 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 139 3e-32 UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryante... 139 3e-32 UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri... 139 4e-32 UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=B... 139 4e-32 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 139 4e-32 UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=R... 139 4e-32 UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=C... 139 4e-32 UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobac... 138 4e-32 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 138 4e-32 UniRef50_A4XFU2 Two component transcriptional regulator, AraC fa... 138 5e-32 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 138 5e-32 UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=A... 138 5e-32 UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=... 138 5e-32 UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=P... 138 5e-32 UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 T... 138 5e-32 UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 T... 138 6e-32 UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 ... 138 6e-32 UniRef50_C6CVB2 Two component transcriptional regulator, AraC fa... 138 6e-32 UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7... 138 6e-32 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 138 6e-32 UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales Re... 138 6e-32 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 138 6e-32 UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. ora... 138 6e-32 UniRef50_C6D3W5 Two component transcriptional regulator, AraC fa... 138 6e-32 UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Pr... 138 6e-32 UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=C... 138 6e-32 UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmanie... 137 7e-32 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 137 7e-32 UniRef50_C6CTP9 Two component transcriptional regulator, AraC fa... 137 7e-32 UniRef50_C6CZ23 Two component transcriptional regulator, AraC fa... 137 7e-32 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 137 8e-32 UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 T... 137 8e-32 UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n... 137 8e-32 UniRef50_B0PFD6 Putative uncharacterized protein n=1 Tax=Anaerot... 137 8e-32 UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=P... 137 8e-32 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 137 9e-32 UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=C... 137 9e-32 UniRef50_B7GST4 Transcription activator, effector binding n=1 Ta... 137 9e-32 UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=P... 137 9e-32 UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=... 137 1e-31 UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6... 137 1e-31 UniRef50_Q21A44 Two component transcriptional regulator, AraC fa... 137 1e-31 UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mir... 137 1e-31 UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n... 137 1e-31 UniRef50_Q5WCU8 AraC/XylS family transcriptional regulator n=1 T... 137 1e-31 UniRef50_UPI0001789620 two component transcriptional regulator, ... 137 1e-31 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 137 1e-31 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 137 1e-31 UniRef50_A6M032 Transcription activator, effector binding n=19 T... 137 1e-31 UniRef50_C6CVC0 Two component transcriptional regulator, AraC fa... 137 1e-31 UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens ... 136 2e-31 UniRef50_C6D6F5 Transcriptional regulator, AraC family n=1 Tax=P... 136 2e-31 UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n... 136 2e-31 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 136 2e-31 UniRef50_A8S8J9 Putative uncharacterized protein n=1 Tax=Faecali... 136 2e-31 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 136 2e-31 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 136 2e-31 UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=C... 136 2e-31 UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=B... 136 2e-31 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 136 2e-31 UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Ta... 136 2e-31 UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 ... 136 2e-31 UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 ... 136 2e-31 UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp... 136 2e-31 UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillu... 136 2e-31 UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteri... 136 2e-31 UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 T... 136 2e-31 UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alka... 136 2e-31 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 136 2e-31 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 136 2e-31 UniRef50_A4XMI8 Two component transcriptional regulator, AraC fa... 136 2e-31 UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=P... 136 2e-31 UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=C... 136 2e-31 UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus... 136 2e-31 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 136 2e-31 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 136 2e-31 UniRef50_UPI0001C3678C two component transcriptional regulator, ... 136 2e-31 UniRef50_A9KQP4 Two component transcriptional regulator, AraC fa... 136 3e-31 UniRef50_UPI00017895AE two component transcriptional regulator, ... 136 3e-31 UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID... 136 3e-31 UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Cl... 136 3e-31 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 136 3e-31 UniRef50_C7M7E1 Transcriptional regulator, AraC family n=2 Tax=B... 136 3e-31 UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=F... 136 3e-31 UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=C... 136 3e-31 UniRef50_A9U7M3 Predicted protein n=1 Tax=Physcomitrella patens ... 136 3e-31 UniRef50_UPI000178A7C6 two component transcriptional regulator, ... 136 3e-31 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 135 3e-31 UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and... 135 3e-31 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 135 4e-31 UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Cl... 135 4e-31 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 135 4e-31 UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacte... 135 4e-31 UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1... 135 4e-31 UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=C... 135 5e-31 UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=So... 135 5e-31 UniRef50_B8I425 Two component transcriptional regulator, AraC fa... 135 5e-31 UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n... 135 5e-31 UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobaci... 135 5e-31 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 135 5e-31 UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacte... 135 5e-31 UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=P... 135 6e-31 UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicu... 135 6e-31 UniRef50_UPI0001C362BB response regulator receiver protein n=1 T... 134 6e-31 UniRef50_C6D789 Two component transcriptional regulator, AraC fa... 134 6e-31 UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=E... 134 6e-31 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 134 6e-31 UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria... 134 6e-31 UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=... 134 7e-31 Sequences not found previously or not previously below threshold: UniRef50_UPI0001C358FB two component transcriptional regulator, ... 136 2e-31 UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Ther... 134 6e-31 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 163 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 55/99 (55%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 +ID H +PL ++ VA+++G S +Y ++F+ T DY+ R+ A L Sbjct: 412 KAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAE 471 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 T++ + +I +GY FSRVF++Q +PS+YR ++ Sbjct: 472 TDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKV 510 >UniRef50_Q9K6U1 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K6U1_BACHD Length = 300 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 38/105 (36%), Positives = 65/105 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MS+ + +Q I +I+ H+ +P++++ VA + YS ++ R+F+ T+ +YI++RRL Sbjct: 1 MSYIQSVQRAIDYIETHLHEPISLEKVAAHASYSYFHFHRLFKATVGCTMSEYIKRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L T+ I DIA + GY SQ+ F+R F++ F+ P YR Sbjct: 61 KAAYALLETKASIIDIAFEYGYESQEAFTRAFKQWFNVLPGKYRQ 105 >UniRef50_Q9K766 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9K766_BACHD Length = 297 Score = 155 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 67/105 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + +I+E++ + + ++ +AK + +S ++ R+F+ + +++ DYIR+RRL Sbjct: 1 MDYVVCIQRTLDYIEENLQEQMTLEQLAKIACFSPFHYHRVFQAIVGESVMDYIRKRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L T+ + IA+++G+ Q++F+R F++ + +P YR+ Sbjct: 61 CAAERLFYTDEKVITIAIEVGFQYQESFNRAFKKIYGVSPRQYRN 105 >UniRef50_C6IVK7 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK7_9BACL Length = 304 Score = 155 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 65/105 (61%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +Q+ + + +ID H+ LN+D +A+ S +SK++ R+F +VT +T YI ++RL Sbjct: 3 DYQERVDQVCKYIDAHLHHKLNLDQLAELSHFSKYHFSRIFASVTGETPFAYITKQRLAR 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA LR T + + +IA+ G+ S +F+ F++ F RTP++ R + Sbjct: 63 AAAYLRETNQSVLEIALGCGFESASSFNAAFKKHFGRTPTEMREQ 107 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 154 bits (392), Expect = 6e-37, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 53/102 (51%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I +IDEH PL ++ VA+ G S +Y ++F+ T DY+ + R+ A E Sbjct: 410 KIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKE 469 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + + + +I +GY FSRVF++ +P++YR +L Sbjct: 470 MADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKKL 511 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 154 bits (391), Expect = 8e-37, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 56/101 (55%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +IQ I++I+EH ++ +N++ +A + Y +F+ + +Y+ + R+ + + Sbjct: 311 LIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIRIEQSKLL 370 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L+ T+ I +IA+++G+ Q FS+VF+ TP YR Sbjct: 371 LKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQN 411 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + IQ I +I+EH D L+I VA+ + YL +F+ T +T Y+ + +L Sbjct: 396 YVNSIQQAIDYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQK 455 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A V LR T+ I +I +G+ FS VF++ F +PS++R Sbjct: 456 AQVLLRNTDMKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQN 500 >UniRef50_B8FN17 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FN17_DESAA Length = 290 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 63/105 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 +++ I + +I +H+D P+ ++ +AK + +S ++ R+F +T + L +YIR+ L A Sbjct: 8 YEERIIRVQMFIQDHLDDPMTLEELAKVACFSPFHFHRIFTAMTGEPLKEYIRRLLLERA 67 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A ELR + +P+ +A++ GY + + F+R FR F P YR L Sbjct: 68 AHELRYSSQPVVQVALNAGYQTHEAFTRAFRNMFGVPPRQYRTEL 112 >UniRef50_A8FAK8 Possible AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK8_BACP2 Length = 295 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 72/110 (65%), Gaps = 3/110 (2%) Query: 1 MSHQK---IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQR 57 MS+Q+ IQ+ + +I++H+ L + +AK +GYS+++ R+F+ V +++ DY+R+R Sbjct: 1 MSYQEHEKTIQETLNYIEQHLKDDLPLQTLAKHAGYSRFHFHRIFKKVIKKSVVDYLRER 60 Query: 58 RLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 R+ AA +L T++ DIA + SQ++F+R F++ +D +P+ YR L Sbjct: 61 RMTQAAKDLIHTDQRAIDIAFQYRFSSQESFTRAFKKIYDMSPARYRKLL 110 >UniRef50_B7JL95 Transcriptional regulator, AraC family n=54 Tax=Bacillus cereus group RepID=B7JL95_BACC0 Length = 299 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 39/104 (37%), Positives = 62/104 (59%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++++I+ I +I+ H+ + L + VA S S ++ R+F+ ++ DYIR+RRL Sbjct: 4 EYKEMIKKAIEYIENHLHEELTTERVASHSAVSMYHFHRIFQRYIGMSVTDYIRKRRLTH 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L +TER + DIAM G+ SQ+ F+R F+R F P YR Sbjct: 64 AAQVLVSTERAVIDIAMQYGFSSQEAFTRAFKRMFQLPPKKYRK 107 >UniRef50_C6J7H0 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7H0_9BACL Length = 301 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 60/106 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ IQ I +I+E + + L + VAK YS+++ R F +T+ YIR+RRL Sbjct: 1 MNQINTIQKSIDYIEERLGEGLTLAEVAKAMFYSEYHFHRTFLFFVGETMTSYIRKRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA L ++ I DIA+ G+ S + F+R FR+ + P++ R R Sbjct: 61 LAAELLAHSDLKIVDIALRCGFGSHEAFTRAFRKMYGILPTECRRR 106 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 55/102 (53%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 II +I+E+ + +++D V+++ S +Y ++F+ T + +Y+ + RL A Sbjct: 429 IIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNAREL 488 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ + I +I GY FSR+F++ TPS++R RL Sbjct: 489 LQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRERL 530 >UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=Cyanobacteria RepID=B0C3V1_ACAM1 Length = 283 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 55/100 (55%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + +Q ++ +ID H+D + + +A+ S ++ R+F+ T ++ Y+ Q+R+ A Sbjct: 182 RQLQQVLDYIDAHLDCEIKLADLAQILDMSPFHFSRLFKLSTGKSPHQYLIQQRIEHAKQ 241 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+ T+R I DIA + G+ S S+ FR+ TP YR Sbjct: 242 LLKQTDRRIIDIAYECGFNSHSHLSKQFRQMMGVTPKVYR 281 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 54/102 (52%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I +I+++ + L + VAK S +Y +MF+ T +Y+ + R+ A Sbjct: 223 VIARAKRYIEDNQAEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNL 282 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L + ++A ++G+ S F+RVF++ ++P++YR +L Sbjct: 283 LLNPNLRVSEVAFEVGFQSLTHFNRVFKKIVGQSPTEYREQL 324 >UniRef50_B1HRP5 Transcriptional regulator, AraC/XylS family n=3 Tax=Bacillaceae RepID=B1HRP5_LYSSC Length = 287 Score = 148 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MS + IQ I ++++H+ + + I+ +A++ S ++ QR F +T ++ DY+R+RRL Sbjct: 1 MSWIESIQKAINFMEDHLLENITIEQIAQEVNSSVFHFQRTFAILTDMSIADYLRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA EL T++ I D+A GY + + F++ FR+Q TPS+ R R Sbjct: 61 LAAQELMDTDQKIIDLAYKYGYETPEAFTKAFRKQHYVTPSEARKR 106 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 148 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 56/102 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 K+IQ + +I+E+ + ++ VA+ S +YL ++F+ Y+ ++++ A Sbjct: 148 KVIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKKMQKAKE 207 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ P+ IA++L Y FS+VF++ TPS+YR R Sbjct: 208 LLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKR 249 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 148 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 47/106 (44%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + H+ II I ++ + + ++ A G S Y R+F+ ++ Y+ R+ Sbjct: 305 VKHRDIICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRIS 364 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ I +I G+ Q F++VFR+ TP +R R Sbjct: 365 RGRAMLLDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFRAR 410 >UniRef50_B0PG61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG61_9FIRM Length = 533 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 50/101 (49%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ +I EH PL ++ V+ G+S Y +F+ T Q +Y+ + R+ A Sbjct: 430 RPIRTAKQYIQEHYADPLTLEWVSNIVGFSGSYFSSLFKKETGQNFLEYLSEVRMNRAKE 489 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LR T + ++ + +GY + F++ F++ P ++R Sbjct: 490 LLRETNLSVAEVCVRVGYSDLKYFTKSFKKATGLKPGEFRK 530 >UniRef50_A5G790 Transcriptional regulator, AraC family n=3 Tax=Bacteria RepID=A5G790_GEOUR Length = 294 Score = 147 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 62/105 (59%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S+Q+ + ++ I +++D+PL I+ +A+ + S ++ R+F +T+ Y+R+ RL Sbjct: 16 SYQERLNRVLIHIQKNLDEPLTIERLAEVACLSPFHFHRIFSAHVGETVTGYVRRLRLER 75 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA + T + D A+ +GY + F+R FR +F +PS++R + Sbjct: 76 AATRIAFTGESVTDTALGVGYETPAAFTRAFRERFGMSPSEFRGQ 120 >UniRef50_C6IS69 Transcriptional regulator n=11 Tax=Bacteroides RepID=C6IS69_9BACE Length = 315 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 1/105 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++ I ++ +ID H+DQPL + +A+ + +S ++ R+F + +T DYI++ R+ Sbjct: 10 EYRSRINRVMDYIDIHLDQPLELKSIAEIANFSPFHFHRIFTFLIGETPIDYIQRLRIEK 69 Query: 62 AAVELRTT-ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA LR + I +IA G+ + FSRVF++ F TPS +R Sbjct: 70 AACRLRENMDISISEIADSCGFCTVSLFSRVFKKFFGLTPSQFRK 114 >UniRef50_B4EY53 Right origin-binding protein n=55 Tax=Enterobacteriaceae RepID=B4EY53_PROMH Length = 300 Score = 146 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 63/105 (60%), Positives = 80/105 (76%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+AW+D ++DQPL++D VA K+GYSKW+LQRMF+ VT Q +G YIR RRL Sbjct: 1 MDQTNIIRDLLAWLDNNLDQPLSLDNVATKAGYSKWHLQRMFKEVTGQAIGSYIRSRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AAV LR T RPI DIA+ + SQQTF+R F++QFDRTP+ YR Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFDRTPALYRR 105 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 146 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 53/103 (51%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H I I +I+++ +Q +++ ++ ++ +Y ++F+ T + Y+ + R+ A Sbjct: 410 HNDSINKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVSYKTYLTKLRIQKA 469 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ + + I +IA +G+ F + F++ TPS +R+ Sbjct: 470 CELLKNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRN 512 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 146 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 61/107 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + ++ +I +I H +P+ + +A S+ R F+++T QT DY+ R+ Sbjct: 186 MTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVR 245 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA LR+ + I DIA+D+G+ F RVFR+ + TPS+YR +L Sbjct: 246 QAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_Q30V01 Transcriptional regulator, AraC type n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V01_DESDG Length = 308 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 62/106 (58%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +++ I I W++EH+++ +++D +A ++ +S ++ R+FR V +++ YIR+ RL Sbjct: 19 TYRMRIMRAILWLEEHMNEAVSLDDMAAQAHFSPYHFHRIFRGVAGESVMAYIRRLRLEK 78 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L + DIA D GY + + FSR FR QF +PS R + Sbjct: 79 AVHRLAYGSASVTDIAFDAGYEAHEAFSRAFRAQFGMSPSALRRHV 124 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 50/102 (49%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I I +I+++ + + + ++ ++ +Y ++F+ T + Y+ + R+ A Sbjct: 409 NNDSINKAIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKA 468 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+ T + I +I+ +G+ F + F++ TPS +R Sbjct: 469 CQLLKNTSKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFR 510 >UniRef50_D1P487 Right origin-binding protein n=2 Tax=Providencia RepID=D1P487_9ENTR Length = 295 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 50/106 (47%), Positives = 73/106 (68%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +I+++I WI+++++ L++D VA KSGY+KW+ QR+F+ T LG YIR RRL Sbjct: 1 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKNQTGLALGSYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AV LR T I DI++ + SQQTF R F++QF TPS+YR R Sbjct: 61 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKR 106 >UniRef50_A6M0I1 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Clostridium RepID=A6M0I1_CLOB8 Length = 127 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+++ I+ I +I+ ++++ + + +A K+ SK++ R+F +V + + +YIR++RL Sbjct: 1 MNYEACIKKSIEYIENNLNKKIQLKELADKAFLSKYHFHRVFHSVVGEPVAEYIRKKRLE 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA EL TTE I DIA+ + +Q++F++ F++ + P ++R Sbjct: 61 EAANELLTTENKIIDIALKYQFSNQESFTKAFKKLYGIPPKEFRKN 106 >UniRef50_C9NSU9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSU9_9VIBR Length = 310 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 67/101 (66%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I ++++I +HI +PL++D +A++S +S+W LQR+F+T T + Y+R+ +L AA Sbjct: 16 RISKVLSFIHQHISEPLSLDDIARQSCWSRWQLQRVFQTETGMAVATYVRELKLSQAAER 75 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T + DIA++LG+ S+ +FSR F++ F +P YR + Sbjct: 76 LIDTSDRVIDIALELGFSSEISFSRSFKQVFGLSPRAYRKQ 116 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 54/103 (52%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + +++ +++ E+ + +++D V+K+ S +Y ++F+ + + +Y+ R+ A Sbjct: 426 ESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIRIGKAK 485 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L E I +I + GY FSR+F++ TP +YR R Sbjct: 486 ELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRER 528 >UniRef50_B6XK96 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B6XK96_9ENTR Length = 310 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 74/106 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +I+++I WI+++++ L++D VA KSGY+KW+ QR+F+T T LG YIR RRL Sbjct: 17 MLQESVIREIILWIEQNLESRLSLDTVADKSGYTKWHFQRLFKTQTGLALGAYIRARRLS 76 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +AV LR T I DI++ + SQQTF R F++QF TPS+YR R Sbjct: 77 CSAVALRLTNDSIMDISLRYRFDSQQTFCRAFKKQFGVTPSEYRKR 122 >UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V467_SPHWW Length = 296 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 62/104 (59%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++Q + +++ HI + +++D++A+++G S+++ R+F+ T Y+ +RR++ A Sbjct: 193 SPVLQRVKDYVEAHIAEDISLDMLAREAGVSRFHFIRLFKDSVGMTPHAYLIERRMVRAC 252 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L T++ I +IA++ G+ F+ FRR + P ++R RL Sbjct: 253 NLLMHTKQSIGEIAVNCGFEDPSYFAARFRRLYRMCPREFRKRL 296 >UniRef50_A9GLA7 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLA7_SORC5 Length = 346 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 61/105 (58%), Gaps = 1/105 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +Q+ + +I +I H + L++D +A + +S ++ R+F+++T + L ++I++ RL Sbjct: 35 EYQRRVNRVIDYIQAHRAEDLSLDTLAAVAAFSPFHFHRVFKSMTGENLREFIQRTRLET 94 Query: 62 AAVELRT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L I +IA++ G+ S F+R F+ +F + S +R+ Sbjct: 95 AASHLVQRPHADILEIALENGFSSASAFARAFKERFGMSASAWRN 139 >UniRef50_C9YDH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDH7_9BURK Length = 319 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + + ++ +ID H+D +++ +A + +S ++ R+F TLGDY+R+RRL + Sbjct: 13 EYTQRMNRVMDYIDSHLDGDIDLAALADVAHFSPFHFHRLFAAWMGATLGDYVRRRRLEV 72 Query: 62 AAVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA++L T + ++A+ +G+ S + F+R F+ +F ++PS +R Sbjct: 73 AALQLAGNTRISVLEVALGVGFGSGEAFARAFKLRFGQSPSAWR 116 >UniRef50_P0A9E4 Regulatory protein soxS n=98 Tax=Proteobacteria RepID=SOXS_ECO57 Length = 107 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 107/107 (100%), Positives = 107/107 (100%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL Sbjct: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL Sbjct: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 55/103 (53%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ ++ L+ +++EH + + ++ A+ YS + + F+ Y+ + RL AA Sbjct: 232 RERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAA 291 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L TT P+ +A G+ + F+R+FRR++ +TP +YR Sbjct: 292 GMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 67/105 (63%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S++ IQ I +I+E + + + +A+ +G+S+ + R+F+ + T+ +Y+R+RRL Sbjct: 3 SYETQIQRSIDYIEEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLAR 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L T+ I DIA + G+ S +TF+R F++ F TPS+YR + Sbjct: 63 AAYQLSHTDEKIIDIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQ 107 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 57/102 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q +++ +A+I H PL +A G S+ YL FR T +Y+ + R+L A Sbjct: 1094 QMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQAR 1153 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L +++ I +IA+++G+ S FSRVFR++ ++P +YR Sbjct: 1154 HLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRR 1195 >UniRef50_UPI0001B9ECE6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECE6 Length = 519 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 57/106 (53%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +S +Q I++I EH+ Q L++ VAK + Y MF+ T Q +++ Q +L Sbjct: 411 VSTTSPVQRAISFIHEHLGQSLSLQQVAKHVHMNPNYFSEMFKKETGQNYIEFVTQAKLR 470 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR T I +IA ++GY + F+R+F++ TPS+YR Sbjct: 471 KAMHLLRETPAKISEIANEIGYEDIKYFNRLFKKWTGLTPSEYRTN 516 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 144 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 54/102 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ +I EH P+ + +A+ ++ Y R F+ +T+ +YI R+ AA Sbjct: 220 ENLKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIGKTITEYINVIRVEKAAT 279 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L TE I DIA G+ + F R F+++ TPS+YR + Sbjct: 280 ALAETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRKK 321 >UniRef50_D2TW49 Right origin-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TW49_9ENTR Length = 305 Score = 144 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 61/105 (58%), Positives = 76/105 (72%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+ WID H+DQPL +D VA K+GYSKW+LQRMF+ +T Q +G YIR RRL Sbjct: 1 MDQNNIIRDLLYWIDTHLDQPLFLDNVAAKAGYSKWHLQRMFKNITQQAIGSYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AAV LR T RPI DIA+ + SQQTF+R F++QF TP+ YR Sbjct: 61 RAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFGITPALYRR 105 >UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B8K3P3_VIBPA Length = 306 Score = 144 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 39/101 (38%), Positives = 64/101 (63%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 I ++ +I H+D PL++D +A +S +S+W LQR+F+ T T+ +Y+RQ +L LAA Sbjct: 12 NRISKVLGFIHRHLDTPLSLDEIAAQSCWSRWQLQRVFQAETGLTVANYVRQLKLSLAAE 71 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T++ + DIA+ G+ S+ FSR F++ F +P YR Sbjct: 72 LLLDTDQRVIDIALATGFNSEIAFSRAFKQFFACSPRVYRK 112 >UniRef50_C6CT66 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CT66_PAESJ Length = 262 Score = 144 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 52/105 (49%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +++ I +++EH+ +P+ + +A + Y +F+ T T DY+ +RR+ A Sbjct: 150 YSAPVKEAIQYLEEHLHEPVTMRDIADHLHMNASYFSVLFKEQTGLTFSDYLTRRRVQRA 209 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L T I +IA GY + + F +VFR +P YR + Sbjct: 210 KELLTNTRLSINEIAEKAGYQTAKYFVKVFRSHEGVSPGQYRKNV 254 >UniRef50_C6IY53 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY53_9BACL Length = 545 Score = 144 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 64/104 (61%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++I ++ ++D H + +++ VA + YL ++F++VT + +Y+ ++R+ Sbjct: 430 DSSQLIWHIVDYLDAHYFEDISLIDVATRFHLDPSYLSKLFKSVTSENFIEYVTRKRIEK 489 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A LR++ER I +I+ +GY +Q+ FS+VF++ +TPS+YR Sbjct: 490 ACELLRSSERKISEISELIGYENQRYFSQVFKKSTGQTPSEYRE 533 >UniRef50_C0CVY3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVY3_9CLOT Length = 529 Score = 144 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 50/99 (50%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 II +I ++ + ++++ VA+ G S +Y ++F+ +Y+ R+ A Sbjct: 424 IITRAQDYIRQNFRKDISLEEVARTVGISPYYFSKLFKEEAGMNFTEYLTGIRIETAKRL 483 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L E I + +D GY + FSR+F++ TP+++R Sbjct: 484 LSERELSIKQVCVDSGYANPNYFSRIFKKWVGITPTEFR 522 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 64/104 (61%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + ++ +I +I+++ +P+ + +A+ + S+ Y R F+ +T ++ +Y+ R+ AA Sbjct: 187 IERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAA 246 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LR T+ I ++A+D+G+ S F+ VFR++F TP +YR RL Sbjct: 247 SRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRL 290 >UniRef50_UPI0001C368D7 AraC-family transcriptional regulator n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368D7 Length = 320 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 65/105 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I ++ +++EH+ + +N + +A+ +G S +Y QR+F+ +T + + +Y++ RRL Sbjct: 1 MHAWEAIDGVLDFMEEHLREEMNTEALAQSAGLSPFYFQRLFKRLTGRPVLEYVKMRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA L E+ I DIA+D G+ S +F+R F+ + +P YR Sbjct: 61 LAASALEDREKRILDIAVDYGFSSHASFTRAFKEAYGISPEKYRK 105 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 55/101 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I ++ +I+ H D+ L++ +A + S +YL +F VT TL YI + R+ A Sbjct: 181 REIAEVARYINAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACA 240 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LR TE P+ +IA +GY S F RVF++ +P YR Sbjct: 241 LLRETELPVTEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRR 281 >UniRef50_C6CSY2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSY2_PAESJ Length = 533 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 58/104 (55%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + +++A++D H + + + +A + YL R F+ T +Y+ ++R+ Sbjct: 419 DASNPMSEIVAYLDGHYFEDVGLIDMATRYHMDPSYLSRQFKAATGVNFIEYVTRKRMEK 478 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A LR ++R + DIA +GY +Q+ FS+VF++ +TPS++R Sbjct: 479 ACELLRESDRKVSDIAELVGYENQRYFSQVFKKFTGQTPSEFRE 522 >UniRef50_C6CVD2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVD2_PAESJ Length = 536 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ I+Q + A+I EH+++ L+ + +A + + YL R+FR T L DYI + R+ Sbjct: 426 MTVSPIVQKVKAYIAEHLNEELSREQLASIAFVNPAYLSRLFRKETGMVLTDYILKERME 485 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L TT+R I +IA L Y + F+R+FR+ TP +YR Sbjct: 486 RAAELLATTDRSISEIADGLSYGNFSYFARLFRKVHGVTPQEYRK 530 >UniRef50_B8I706 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I706_CLOCE Length = 284 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 59/104 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I +I+ ++ ++ + A+ + S ++ QRMF ++T L +YIR+RRL Sbjct: 1 MDWLNRMNKAIDYIESNLADKISYNKAAQIACCSTYHFQRMFSSITDVPLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LAA EL+T++ + D+A GY S + FSR F++ P+ R Sbjct: 61 LAAFELQTSDIKVIDVAFKYGYESPEAFSRAFKKLHGVMPTSAR 104 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 61/100 (61%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ + +++ H+D+ +D +A+++G SK++ R+FR T + Y + R+ +A L Sbjct: 209 LRRITDFMEAHLDEEFRLDELAREAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLL 268 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 R T R + ++ +++GY S F++VF+R+ PS+YR + Sbjct: 269 RETSRSVIEVGLEVGYSSPSHFAQVFQREAGVPPSEYRRQ 308 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 50/102 (49%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + Q+++ +ID++ + + VA +S YL ++F+ YI + R+ A Sbjct: 142 EEFQEVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKE 201 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + I +IA +GY F +VF++ + TPS+YR Sbjct: 202 ILINSNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYRTN 243 >UniRef50_A8RX40 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RX40_9CLOT Length = 140 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 68/105 (64%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + ++ +I +I+EH+++ LN++ +A+ +GYS+++L R+F T T+ Y+++RRL + Sbjct: 3 NQKHTVRKVIDYIEEHLEEKLNLEQIAEHAGYSRFHLNRIFMEETGGTIHKYVQERRLTM 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L T+ I IA D GY SQQ FS F++ + P YR R Sbjct: 63 AAEKLVDTDMDITQIAYDAGYQSQQAFSLAFKQVYLCPPGAYRKR 107 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 58/103 (56%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ + +I+ + ++ID++AK + SK+Y R+F+ +TH T DYI + R+ A Sbjct: 182 EKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIE 241 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 ++ T I +IA ++G+ + F +VF+ TP Y+ + Sbjct: 242 LIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_B7HW35 Transcriptional regulator, AraC family n=34 Tax=Firmicutes RepID=B7HW35_BACC7 Length = 281 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 66/106 (62%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + + + +I+ +D+ ++ +AK + S+++ RMF +++ +L +YIR+RRL Sbjct: 1 MDWLERMNNALEYIENSLDEDIDYKKIAKAASCSEFHFSRMFSSISGVSLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LAA E++ + I D+A+ GYVS FSR F++ TPS+ R++ Sbjct: 61 LAAFEIQKGDIRIIDVAIKYGYVSSDAFSRAFKKMHGITPSNARNK 106 >UniRef50_C6J070 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J070_9BACL Length = 523 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 55/106 (51%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S ++Q + ++++ + ++++ A+ S +Y ++F+ T + DY+ + R+ Sbjct: 415 SRSHVLQRALLFVNQRFKEEISMEQTAEYVNLSPYYFSKLFKLQTGENFSDYLTRLRIEE 474 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A + + +I ++GY FSRVF++ TPS+YR ++ Sbjct: 475 AKRLIAGRSLSLKEICYEVGYKDPNYFSRVFKKSVGITPSEYRQQI 520 >UniRef50_A6GKR6 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GKR6_9DELT Length = 306 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +++ I +I++++ + L+++ VA+++ +S ++ R++ +T ++L +I + RL Sbjct: 6 EYRRRINRAQDYIEQNLGRSLSLEEVAQQAAFSPYHFHRLYTAMTGESLYQFILRLRLEK 65 Query: 62 -AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AAV + R I +IA++ G+ S TF+R F+ +F + S+YR R Sbjct: 66 AAAVAVACPHRSITEIALETGFSSPATFARAFKAKFGVSASEYRGR 111 >UniRef50_C4X304 Right origin-binding protein n=9 Tax=cellular organisms RepID=C4X304_KLEPN Length = 289 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 77/105 (73%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL++W++ H+DQPL++D VA K+GYSKW+LQRMF+ VT +G YIR RRL Sbjct: 1 MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +AV LR T RPI DIA+ + SQQTF+R F++QF TP+ YR Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRR 105 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 60/103 (58%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + +++ +ID H + L +D +A SG+SK++ R+F+ T T DY+ RR+ Sbjct: 199 EYLQKFNEVLDYIDSHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKA 258 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L E I +IA+ G+ S TF+R+F+++ TPS+YR Sbjct: 259 AEELLANPELSITEIALQSGFSSISTFNRIFKQKKGCTPSEYR 301 >UniRef50_C4XUB5 AraC family transcriptional regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XUB5_DESMR Length = 292 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 59/104 (56%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 Q+ + + ++ +D+ L + +A + +S ++ R+F +T +T+G Y+R+ RL Sbjct: 8 DWQRRVLAAMRLMEARLDEELALSDIAGAAHFSPYHFHRIFVGMTGETVGAYLRRLRLER 67 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L ++P+ +A++ G+ S + F+R FR + +PS +R Sbjct: 68 AAQRLCYGDQPVTTVALEAGFESPEAFARAFRAVYGVSPSAWRQ 111 >UniRef50_B8DRY5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRY5_DESVM Length = 436 Score = 142 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ I +I +I + +D +A + +S ++ R+F + +TL +IR+ R+ A Sbjct: 71 YEARINRVIDYIVADPARDFTLDELAGAAPFSPFHFHRIFAGLVGETLHAFIRRLRMDRA 130 Query: 63 AVELRT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A L + D+AMD G+ S Q F+R FR +FD TPS+YR R Sbjct: 131 ANMLAFAPALSVTDVAMDCGFSSSQNFARAFRERFDMTPSEYRRR 175 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 51/102 (50%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ I++I E++DQ L + ++ G S +Y R F+ T Y+ R+ A Sbjct: 203 KLRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYVMNCRIERAKKL 262 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L +T + I I +G+ SQ F+ VFR+ TP YR ++ Sbjct: 263 LGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQV 304 >UniRef50_UPI0001C36EC6 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EC6 Length = 292 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 64/106 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + IQ+ I +I+ +I + L+ + +A ++ S +Y Q++F + TLG+YIR RRL Sbjct: 1 MNWAEGIQNAINYIENNITEELDNNSIAAQACCSSYYFQKIFSLLCDMTLGEYIRNRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LA EL +T+ + DIAM GY + ++F+R F +PS+ R Sbjct: 61 LAGSELISTDIKVIDIAMKYGYSTPESFTRAFTLFHGVSPSEARKN 106 >UniRef50_C6D5X4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5X4_PAESJ Length = 533 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 52/104 (50%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 +S ++ + + ++ ++ + ++++ VA + Y R F+ T T +Y+ +++ Sbjct: 429 VSKRREVSEARKYVSMNLGKRISLEEVAAHLHMNPSYFSRFFKKETGLTFIEYVTDQKIE 488 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L T + +I LGY +Q F + F+ Q TP++YR Sbjct: 489 RAKELLDQTNYYVSEICEMLGYDNQSYFIKTFKAQTGLTPTEYR 532 >UniRef50_P0ACI1 Right origin-binding protein n=101 Tax=Enterobacteriaceae RepID=ROB_ECO57 Length = 289 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 58/105 (55%), Positives = 77/105 (73%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M II+DL+ W++ H+DQPL++D VA K+GYSKW+LQRMF+ VT +G YIR RRL Sbjct: 1 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +AV LR T RPI DIA+ + SQQTF+R F++QF +TP+ YR Sbjct: 61 KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRR 105 >UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE Length = 294 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 52/102 (50%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + ++ +I +I+ ++ Q L+I +A + SK Y R F+ + Y+ Q+R+ A Sbjct: 192 RSQLKRVIDYIEANLAQDLSIFDLASLTNMSKSYFSRSFKQSVGISPYQYVIQQRVERAK 251 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ I DIA+D G+ +Q ++ FR+ TP Y+ Sbjct: 252 QLLKQQSISISDIALDCGFANQTHLTKAFRQMTGTTPKAYQK 293 >UniRef50_C3RPB0 AraC-family transcriptional regulator n=3 Tax=Bacteria RepID=C3RPB0_9MOLU Length = 286 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 67/106 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + +I+E+ D+ ++ID +A + SK+Y QR+F +T +T+ DY++ RRL Sbjct: 1 MYAWQEIQVTLDYIEENYDKEIDIDKLAAIAHLSKYYYQRLFFRLTKKTVNDYVKLRRLE 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L+ TE+ I DIA+ G+ F+R F+ + TP DYR++ Sbjct: 61 KAANQLKNTEKRILDIAIACGFSGHSAFTRAFKEVYKITPDDYRNQ 106 >UniRef50_A7GBT6 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=A7GBT6_CLOBL Length = 289 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 69/106 (65%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + K ++ I +I+E+++Q L + VAK GYS ++ R+F + +T+G+YIR+R++ Sbjct: 1 MDYIKSLEKAIMYIEENLNQDLKTEDVAKSIGYSYYHFTRLFEGLLGETIGNYIRKRKIT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +L T++ I DIA+D + S + F+R F++ +D +P++YR Sbjct: 61 KTAQDLIYTDKRIIDIALDFQFKSPEAFARAFKKIYDISPTEYRKN 106 >UniRef50_Q2RGN4 Two component transcriptional regulator, AraC family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGN4_MOOTA Length = 548 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 52/103 (50%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +I +I+ + Q L ++ VA++ S Y ++F+ DY+ + RL A Sbjct: 435 NSSLIDRASKYIEANFSQDLTLEEVARQVYLSPCYFSKLFKQFKGLNFIDYLTKVRLKAA 494 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T+ P+ +IA +GY + F +VF++Q TPS +R Sbjct: 495 RELLLNTKLPVAEIATRVGYRDARYFGQVFKKQEGYTPSVFRK 537 >UniRef50_B6R2M9 Transcriptional regulator, AraC family n=3 Tax=Rhodobacteraceae RepID=B6R2M9_9RHOB Length = 283 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 64/103 (62%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++K + ++ +I ++D L++D +A + S+++ R+F+++ +TL IR+ RL A Sbjct: 10 YEKRMLRVLEYIYNNLDGDLSLDALADVACMSRFHWHRVFQSMRGETLATSIRRIRLNRA 69 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A++L +++PI +IA GY S Q+FSR F+ ++ P +R Sbjct: 70 ALDLIQSKQPITEIAEQYGYPSAQSFSRAFKGEYGMAPGQFRE 112 >UniRef50_B3QWJ9 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=B3QWJ9_CHLT3 Length = 331 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + I I +I+ H+ + L+++ +AK + +S ++ R+F + +TL +I++ R+ Sbjct: 15 EYICRINRAIDYIETHLSEKLSLETIAKAAFFSPFHFHRIFHGLVGETLNRFIKRLRVEK 74 Query: 62 AAVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L ++ + DIA+D G+ + T SR F+ F +P+ +R Sbjct: 75 AARMLADNPKQTVSDIALDCGFSTTSTLSRAFKETFSMSPTAWRK 119 >UniRef50_C6C946 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6C946_DICDC Length = 313 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 69/102 (67%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I DL+ WI+ H++ PL I V KSGYSKW+LQRMF+ T +LG YIR RRL AAV Sbjct: 10 RFIADLVGWIESHLESPLMISDVTAKSGYSKWHLQRMFKKETGISLGTYIRNRRLSQAAV 69 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 EL+ T + I ++A+ + SQQ+F+R F++ F +P YR + Sbjct: 70 ELKLTSQTIQEVALRYCFDSQQSFTRTFKKHFGTSPGHYRKQ 111 >UniRef50_A6VR73 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Marinomonas RepID=A6VR73_MARMS Length = 306 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 65/105 (61%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 I+ ++ +I E++D+ +++ +A+KS +S+W QR+F T ++ YIR+ RL Sbjct: 5 DRLTRIEKVLDYIHENLDESIHVSSLAEKSCWSRWQFQRVFGQATGLSVAQYIRELRLSK 64 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L +++ DIA+ G+ S+ +FSR F++ F+ TP DYR R Sbjct: 65 AAELLLSSKNRHVDIAIQCGFDSEISFSRAFKQMFNCTPRDYRQR 109 >UniRef50_Q2B3U5 Transcriptional regulator (AraC/XylS family) protein n=2 Tax=Bacillus RepID=Q2B3U5_9BACI Length = 297 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 60/103 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + IIQ I I+ + + L++D +A+ +G+SK++ R+F+ T+ +YIR RR+ + Sbjct: 6 YSSIIQKSIEHIESSLHEDLSLDHIAQTAGFSKFHYHRIFQKEVGVTVSEYIRYRRIANS 65 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L T+ I DIA+ + SQ+ F+R F++ + P YR Sbjct: 66 AHMLLYTDEKILDIALYFQFESQEAFTRSFKKYYHLPPGKYRK 108 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 60/103 (58%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + I+D++ +I+++ ++ L++D ++++ SK+YL R+F+ + +YI + R+ A Sbjct: 183 IERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAM 242 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ + +IA + G+ + F +VF++ TP +R + Sbjct: 243 ELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_UPI000178A7F3 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A7F3 Length = 349 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 58/106 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + ++ +++ A+I+ ++ + L++D VA G + Y ++F+ +T +T Y ++R+ Sbjct: 241 NAKEPVEEAKAYIERNLSRDLSLDEVADMLGLNPSYFSQLFKQMTDETFVHYRIKKRMEK 300 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L I DI+ ++GY F++ F++ TPS+YR L Sbjct: 301 AKKLLAIPHYKITDISFEVGYADHPHFTKTFKKVTGYTPSEYREML 346 >UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745884 Length = 295 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 58/104 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q + ++ +I +H+ +P+N D VA + S R FR+ T +T Y+ + RL AA Sbjct: 189 QARVDRVMQFIHKHLCEPINRDQVAAIAALSPGAFSRFFRSRTGRTFPAYLNELRLGRAA 248 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L TT+ + D+A D G+ + F+R+F + TPS++R RL Sbjct: 249 RLLSTTDLRVVDVAADCGFRNLAHFNRLFLKWKGVTPSEFRKRL 292 >UniRef50_B8FUU7 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUU7_DESHD Length = 129 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 67/105 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++ + D + +I+E++D ++++ +A+K+ SK+Y R+F VT +++ YI +RR+ Sbjct: 1 MDYRAKVYDSLDYIEENLDDRIDLEDLAQKAYLSKYYYHRLFHKVTGESVTRYITRRRMA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA EL TE+PI DIA+ Y SQ++F+R F R + P YR Sbjct: 61 KAAEELVETEQPIIDIALKYQYASQESFTRAFMRIYGLAPGKYRK 105 >UniRef50_B7DU32 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU32_9BACL Length = 334 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 49/101 (48%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +IIQ + +I H+ L++ +A S ++L +FR TL +I+ RL A Sbjct: 225 SRIIQAAVDYIQSHLADELSLTRIAVYCSVSTYHLSHLFRKEMGMTLTAFIKSLRLKKAR 284 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L + + +IA +G+ FS+ FR + PS+YR Sbjct: 285 ELLLNSSLTVSEIAYQVGFSDPNYFSKTFRVTYGLPPSEYR 325 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 57/104 (54%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +++IQ + +I+ + ++ +++ +A+ S Y R F+ + +Y+ + R+ A Sbjct: 194 KELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAK 253 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ T+ I DIA+ +G+ +QQ F+ +F++ TP YR + Sbjct: 254 ELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNV 297 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 57/104 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + + +ID H + + +D +AK +G+SK++ R+F+ T+ T Y+ Q+R+ L Sbjct: 178 EYLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIEL 237 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L + + AM G+ + TF RVF+ + TP+++R Sbjct: 238 ALTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRK 281 >UniRef50_A7VR09 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR09_9CLOT Length = 568 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 53/104 (50%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ +I EHI Q L+++ +A+ S + R F+ +TL +I + ++ AA Sbjct: 456 SDFVERTKEYIFEHIGQDLSLEDIAEHFYLSPSHFSRTFKAQAGETLIRFISRCKMEYAA 515 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L T I+D+ +GY S + F+++F+ PS YR R+ Sbjct: 516 QLLSNTNLKIYDVCEQVGYKSLRHFNKLFKAYTGMQPSGYRQRM 559 >UniRef50_C1I964 Transcription activator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I964_9CLOT Length = 286 Score = 141 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M++ + IQ I +++ HI + +N + VA+ S ++ R+F +T T +YIR+RRL Sbjct: 1 MNYIQSIQKSIDYMENHILEDINYEDVARHVYMSNYHFHRLFSMITGITANEYIRKRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +A E+ ++ + DI++ GY S ++FS+ F R TP+ R Sbjct: 61 MAGQEISMSDAKVLDISLKYGYDSPESFSKAFMRFHGVTPNIARR 105 >UniRef50_C5BEG3 Transposon tn10 tetd protein (Orfr) n=2 Tax=Edwardsiella RepID=C5BEG3_EDWI9 Length = 122 Score = 141 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 47/104 (45%), Positives = 76/104 (73%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 HQ ++ LI WI++++D+ + ID +A+++GYSKWYLQR+F+ VT +L Y+R+RRL+ A Sbjct: 7 HQLLVDALIQWIEQNLDKRILIDDIAERAGYSKWYLQRLFKEVTGYSLAAYVRKRRLIRA 66 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A EL+ + + I +I + G+ SQQTFSR F+R++ +P YR + Sbjct: 67 AAELQRSNKKIMEIMLQYGFDSQQTFSRAFKRRYGTSPGSYRQQ 110 >UniRef50_A6D8X3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D8X3_9VIBR Length = 295 Score = 141 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 67/102 (65%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ ++ +I +++D+PL + +A S +S+W LQR+F+ T+ L Y+R+++L A Sbjct: 9 HLNRVEKIVDYIHQNLDKPLTVTELADISCWSRWQLQRVFQEQTNHNLAQYVREQKLSRA 68 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +L +++ + DIA+D G+ S+ +FSR F++ F +P YR Sbjct: 69 AEQLLKSDQKVTDIALDFGFNSEVSFSRAFKQLFAISPRQYR 110 >UniRef50_C6D8S9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S9_PAESJ Length = 534 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 57/103 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 I + +I+E++ LN + +A+ + YL R+FR T ++L DY+ RR+ + Sbjct: 427 SNTIAKVQGYIEENLQHDLNREEIARHVYLNPAYLSRLFRKETGKSLTDYMVDRRMFRSI 486 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 EL+ T I DIA+ +GY S FS+ F++ TP DYR + Sbjct: 487 RELKLTNHKISDIAISVGYASFSHFSKQFKKSTGMTPQDYRKK 529 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 57/100 (57%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ +I +I+ ++ + ++++ VA S +YL ++F+ Y+ R++ LA L Sbjct: 244 MKAVIDYIERNLKKGISLEDVANHVNISTYYLSKIFKKEMGVNFITYVTDRKMDLAKEML 303 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 T+ P+ +IA+DL Y FS+ F+++ TPS+YR + Sbjct: 304 VNTDIPVLNIALDLAYNEANYFSKAFKKKTGLTPSEYREK 343 >UniRef50_Q2BDI9 Two-component response regulator n=2 Tax=Firmicutes RepID=Q2BDI9_9BACI Length = 525 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 48/102 (47%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + ++ +I+ H + L ++ A+ S +Y ++F+ T D++ R+ A Sbjct: 422 KDMLYKAKEYIEAHYAEALTLESAAEYVDLSPFYFSKLFKDRFGMTFIDFVTDVRIRKAK 481 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ + +I +GY FSRVF++ +P++YR Sbjct: 482 HFLKEGSLSLKEICYSIGYKDPNYFSRVFKKHTGLSPTEYRK 523 >UniRef50_C5ETL2 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETL2_9FIRM Length = 517 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 56/101 (55%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I+ I +I EH + ++++ VA + G + YL +F + ++R+ R+ A Sbjct: 417 TIKRAINYIREHYKEGISLEEVAGRLGITPEYLSTLFNREMGENFSTFLRKFRISHAKRL 476 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L+ T+ +++IA ++GY + F+RVF+ + +P DYR + Sbjct: 477 LKGTDMKVYEIAEEVGYTDPKYFARVFKEELGISPGDYRQQ 517 >UniRef50_UPI0001C36936 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36936 Length = 527 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S +I + +I EH + + + +A+ YL R+F+ QT +Y+ R+ + Sbjct: 411 SRSPVIDRALVYIREHYSENITLQSLAEDIYLHPVYLSRLFKEKVGQTFLEYLTHYRIEM 470 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A LR I+DI +GY + Q FSRVF+ TP +R L Sbjct: 471 AKDYLRNPNLRIYDIGQMVGYETPQYFSRVFKELTGTTPKGFREEL 516 >UniRef50_B8FSY0 Transcriptional regulator, AraC family n=6 Tax=Clostridiales RepID=B8FSY0_DESHD Length = 291 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 65/106 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++K ++ + +I+ H+ + ++ VAK +GYS ++L R F + +++G YI++RRL Sbjct: 1 MDYRKALEHAVMYIENHLGSDIKVEDVAKAAGYSYYHLNRQFTAILGESIGSYIKKRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA ++ T R I DIAM+ G+ S + FSR F+ + +P YR Sbjct: 61 DAAKKILYTNRKIIDIAMENGFESPEAFSRAFKAIYKVSPQTYRQN 106 >UniRef50_UPI0001B9EE80 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EE80 Length = 285 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + + I +I+ +I + ++ AK + S ++ QRMF +T TL +YIR+RRL Sbjct: 1 MDWVQRMNEAIGYIEANITEEIDYAEAAKVACCSAYHFQRMFPFITDVTLSEYIRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL+ ++ + D+A+ GY S + F+R F+ TP+ R Sbjct: 61 LAAYELQNSDIKVIDLALKYGYDSPEAFARAFQNMHGTTPTAARQ 105 >UniRef50_D1UAH3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAH3_9DELT Length = 285 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 57/104 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 H + + ++ I H+D P+ + +A + +S ++ R+F + +++ +IR+ RL Sbjct: 11 DHAERMDRVLEHIQAHLDDPMQLLDLADIACFSPYHFHRIFSGMIGESVKSHIRRLRLER 70 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA+ L+ E P+ DIA G+ + ++F+R F F +P +R Sbjct: 71 AAITLKLGEAPVTDIAFQAGFETHESFTRAFNAMFGLSPQRFRQ 114 >UniRef50_Q05587 Regulatory protein pocR n=57 Tax=Gammaproteobacteria RepID=POCR_SALTY Length = 303 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 52/105 (49%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ + +ID H+ L ++ VA S +Y ++F+ ++ ++R++ A Sbjct: 190 HDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSA 249 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L ++ I IA +LG+ F +VFR+ + TP YR ++ Sbjct: 250 RELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQI 294 >UniRef50_C6D127 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D127_PAESJ Length = 534 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 58/100 (58%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++Q + +I E++++ ++ + VA G + YL R+F+ T Q L DY+ + ++ A Sbjct: 429 VVQKSVQYIKENVEEDISREDVAAHVGLNPAYLSRLFKKETGQNLIDYLIETKMARARQL 488 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L TT + IA +GY + F+++F++Q+ P +YR+ Sbjct: 489 LDTTGMTVSAIAQQVGYSNFSHFTKMFKKQYGINPQEYRN 528 >UniRef50_A3VBK3 Transcriptional regulator, AraC family protein n=2 Tax=Rhodobacterales RepID=A3VBK3_9RHOB Length = 278 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 67/103 (65%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++K + ++ ++ +++D L++D +A + S+++ R+F VT + + +IR+ RL Sbjct: 4 DYEKRLLRVLDYVYDNLDGDLSLDTLADVAALSRFHFHRVFTAVTGEPVAHFIRRVRLHR 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +EL +++ P+ ++A +GY + ++FSR FR F RTPS++R Sbjct: 64 AGLELLSSDAPVAEVAAKMGYDNARSFSRSFRDAFGRTPSEFR 106 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 54/102 (52%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ I++ I +ID+ + +++ VA+ + Y +F+ T +Y+ +RR+ A Sbjct: 153 REPIREAIQFIDQRLKDDISLKDVAEHVHLNPSYFSTLFKEQMQLTFSEYLTRRRMQRAK 212 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L TT+ + +IA + GY + + F +F+ +TPS YR Sbjct: 213 ELLMTTDMTVAEIAEECGYRTAKYFIHLFKEMEGKTPSSYRK 254 >UniRef50_UPI0001788F54 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F54 Length = 523 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 54/100 (54%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + L+ +I +H P+ + VA++ ++ YL F + + +Y+ + RL A L Sbjct: 416 MDRLLEYIQDHYADPITLTGVARQFHFNASYLSSYFASYNGEGFSEYLNKIRLEKAMELL 475 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 TTE I +I+ +GY Q F++VF++Q +PS +R + Sbjct: 476 LTTELTISEISASVGYSDQSYFTKVFKKQTGISPSQFRRQ 515 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 52/101 (51%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ + +I++H+DQ L + +A++ G S++Y R+F+ Y ++R+ A Sbjct: 209 LLNRALEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPHQYAIKQRIKKAKGL 268 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LR T PI IA G+ + S+ FR+ TP +R + Sbjct: 269 LRQTNTPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQ 309 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 53/104 (50%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + I++ ++ +I+E+ ++ + + +++ + Y R+F+ T +Y+ + R+ Sbjct: 422 NENNIVERVVKYINENFEKEIRLKELSQTIYLNPEYFSRLFKKEVGCTYAEYLTRIRIEA 481 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L I +IA +GY FS+VF++ +PS++R Sbjct: 482 AKKYLANPSLTISEIARKVGYQDANYFSKVFKKVVGISPSEFRK 525 >UniRef50_UPI0001788A43 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A43 Length = 516 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 53/101 (52%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H++I+ + +I +P+++ VA + S+ Y +F+ VT DY+ RL A Sbjct: 410 HERIVLQAVRYIKARFTEPISLQEVADEVAVSRNYFSELFKRVTGHNFIDYVIDLRLKRA 469 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 L TT ++++A G+ + FS++F++ TP++Y Sbjct: 470 KELLSTTSLRVYEVADRSGFNDVKYFSKLFKKMVGMTPAEY 510 >UniRef50_B0C4S9 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4S9_ACAM1 Length = 261 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 49/103 (47%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K +++++ +ID ++DQ + + +A S+ + MF+ Y+ QRR+ A Sbjct: 156 SKRLRNVLDYIDANLDQNMGLADLAAVVDLSQHHFSSMFKESMGVPPYRYVLQRRIQQAK 215 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L+ I DIA+ G+ Q ++ FR+ TP YR Sbjct: 216 QLLKNDSLSITDIALTCGFADQSHMTKHFRKTVGITPKTYREN 258 >UniRef50_UPI0001C357C1 AraC family transcription regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C357C1 Length = 307 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 38/106 (35%), Positives = 69/106 (65%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 ++ + I +I +I+EH+ ++ ++++ +A YS+++L RMF +V L Y+ +RRL Sbjct: 21 NNIEEIAAVIDYIEEHLMEEKMDLESIASIFHYSRYHLHRMFASVAGFPLHTYLTRRRLT 80 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L T+RP+ +IA+ GY +Q++FSR F++ F +PS YR + Sbjct: 81 EAARLLVWTDRPVLEIALASGYETQRSFSRAFQKYFQHSPSRYRKK 126 >UniRef50_A9KJM4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJM4_CLOPH Length = 517 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ ++ ++D H D+ + ++ VA S Y R+F+ T DY+ R+ A L Sbjct: 414 IRKVLRYVDTHYDEDITLEEVAGILNISPQYFSRIFKEKMGVTYVDYLTNIRIKKAQEWL 473 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 +++ I +I +GY FSRVF++ TP + Sbjct: 474 IYSDKNIQEICYMVGYKDPNYFSRVFKKTVGVTPKQF 510 >UniRef50_B1HZR5 Transcriptional regulator (AraC/XylS family) n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HZR5_LYSSC Length = 294 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + Q +I +I+E + + + ++ + +GYSK++L R+F+ T T+G+YIR RRL Sbjct: 1 MEYSQATQRIITYIEEQLMEEIELEFMPSITGYSKFHLSRIFKQETGLTIGEYIRMRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +AA L + I IA + SQ+ F+R F+ + P YR + Sbjct: 61 VAASCLIYSNASIITIAFKFQFQSQEAFTRAFKEVYALPPGKYRKLM 107 >UniRef50_B2SZ92 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=B2SZ92_BURPP Length = 314 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 60/104 (57%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ + ++ I +H+D+PL+ID +A+ + S ++ R+++ + +T+ +R+ RL A Sbjct: 36 YETRLGRVLDHIYDHLDEPLDIDRLAEIACLSPYHWHRIYQAMYGETVATTVRRLRLHRA 95 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A L PI +IA GY S Q+FSR FR F P+ YR + Sbjct: 96 AGYLANGSMPIVEIAERSGYSSLQSFSRTFRAVFGVPPAQYRKQ 139 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 55/100 (55%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +++ +I +H+ + ++ + +A + YL R+F+ T ++ DY+ Q+RL +AA Sbjct: 427 VVEQAKTYIHQHLAEEISREDIASHVYLNPDYLTRIFKRETGMSISDYLLQQRLRIAAEL 486 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T+ + +A +GY + FSR+F++ P +YR Sbjct: 487 LANTDLAVSAVASRIGYANFSHFSRIFKKYMGINPLEYRQ 526 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 50/102 (49%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 +IIQ++ +I EH L+++ VA K S+ YL + F+T T +YI R+ A Sbjct: 173 RIIQEVATYIYEHYADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACN 232 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T + I DIA + G+ F FR+ +P YR Sbjct: 233 LLLETNKSITDIAFECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_Q24TQ4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=Q24TQ4_DESHY Length = 305 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 61/105 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M IQ + + + H+ + ++ ++VAK++ S ++ QR+F + +LGDYIR RRL Sbjct: 15 MDWITGIQRSLDYTEAHLTEKIDYEMVAKQAYSSAFHFQRVFSILCGFSLGDYIRMRRLA 74 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA +L T+ I IA+ GY + ++FSR F R TP++ R Sbjct: 75 RAAEDLLCTDEKIIHIALKYGYDTPESFSRAFLRFHGITPTEARR 119 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 58/100 (58%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ +A+++EH+ +P N+ +++ G S+++ R+F+ T + Y ++R+ A + Sbjct: 231 KLRRAVAYLEEHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLL 290 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ T+ I I M +GY S F++VFRR+ PS YR Sbjct: 291 LQETDTSIIKIGMSVGYSSPSHFAQVFRRETGLPPSHYRR 330 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 57/104 (54%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ +I I + P+ + +A S+ R F+++T QT DYI R+ AA Sbjct: 192 IDRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAA 251 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LR ER I DIA+++G+ + F RVFR+ + +PS++R RL Sbjct: 252 ELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRL 295 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 51/95 (53%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 + +I + ++Q + + +A+ G S+ + R F+ T Y+ Q+R+ A L+ T Sbjct: 195 VTRYIADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQT 254 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 ++ + DIA+ G+ S FSR FR+ TPS YR Sbjct: 255 QQSLVDIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_A5G651 Two component transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G651_GEOUR Length = 266 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +Q + +ID+H + + VA +G S ++ ++F+ + T D++ R+ A Sbjct: 156 YSNKMQKALNFIDDHYRTKIRLGTVADHAGMSMYHFSKIFKKIMGITYQDHLNNIRIETA 215 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 V L+ T I D+A ++GY F + F++ PS YR + Sbjct: 216 MVLLK-TNYSITDVAFEVGYEDITHFGKTFKKIVGYPPSKYRKNV 259 >UniRef50_C7GGB1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGB1_9FIRM Length = 551 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHI-DQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + +IQ A+I+++ + +++++VA + S + +F T T +Y+ + R+ Sbjct: 436 YDNLIQHAKAYIEDNYNHEDISLNMVASEVNLSSSHFSTVFGQETGVTFVEYLTKVRMDK 495 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LRTT +IA ++G+ FS +F++ TP +YR+R Sbjct: 496 AKQLLRTTGTKTTEIAFEVGFRDAHYFSNLFKKTQGCTPREYRNR 540 >UniRef50_Q72FD7 Transcriptional regulator, AraC family n=3 Tax=Desulfovibrio vulgaris RepID=Q72FD7_DESVH Length = 326 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ + LI I ++ PL ++ +A S +S ++L R+F TV +TL +IR+ R+ A Sbjct: 10 YESRVNRLIDHIVNNLSGPLTLEEMAAVSSFSPFHLHRIFSTVMGETLAAFIRRVRIERA 69 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AV L R + DIA G+ S Q +R F R P YR Sbjct: 70 AVLLLWNPTRSVTDIAFACGFSSSQNLARAFTRHMGMPPGVYRR 113 >UniRef50_C6BZC0 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC0_DESAD Length = 297 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 66/104 (63%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + + +++ +I ++D L+ + +A+ + +S + R+F+ + ++L +++R+ RL A Sbjct: 8 YNERMMEVLLYIQRNLDGDLSPETLAELACFSVAHFHRIFKGMVGESLKEHVRRLRLERA 67 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + L + + +IA+D G+ S +TFSR F+++F +PSD+R+ Sbjct: 68 SYRLCYSNTTVMEIALDAGFESPETFSRAFKKRFLVSPSDFRNN 111 >UniRef50_Q81BV9 Transcriptional regulator, AraC family n=72 Tax=Firmicutes RepID=Q81BV9_BACCR Length = 296 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + I + +I+ +I+ L+I+ +A +G+SK++ R+F+ + +++L Y+ + +L Sbjct: 9 EYLRRIYKVQDYIESNINDSLSIEELADVAGFSKFHFHRIFKGIVNESLSRYVNRLKLER 68 Query: 62 AAVELRT-TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L T+ I DIA G+ FSR F+ + +PS YR+ Sbjct: 69 ATHLLTYRTDMTITDIAYHFGFTDSAVFSRTFKNYYGVSPSQYRN 113 >UniRef50_C6LII8 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LII8_9FIRM Length = 502 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 52/103 (50%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K IQ + +I+ H + L+++ VA + Y R F+ T QT +Y+ RL + Sbjct: 398 SKNIQLAVEYINAHYAEQLSLEQVAASVYLNPDYFSRAFKMETGQTFVNYLTDVRLSRSV 457 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T + IA +GY + FS +F++++ +P +YR + Sbjct: 458 WLLENTALRVQMIAQQVGYYNASYFSTIFKKKYGMSPYEYRRK 500 >UniRef50_A8RMQ2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMQ2_9CLOT Length = 502 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQP-LNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + + +A+++E+ P L+++ A +G S F++ T T DY+ + R+ Sbjct: 390 YSRPVVKALAYMEENYSSPDLSMEDTAVAAGLSSARFSTSFKSETGVTFTDYLLKLRMEK 449 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +R R I++IAM GY + FS F++ PS+YR + Sbjct: 450 AKDLMRDPNRKIYEIAMMTGYSNIPYFSTAFKKYTGCPPSEYREK 494 >UniRef50_Q8A6I0 Transcriptional regulator, AraC-type n=21 Tax=Bacteroidales RepID=Q8A6I0_BACTN Length = 285 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 63/105 (60%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +QK + ++ +I++H+ + +++ +A+ S +S +Y R+ + + +G +I + R Sbjct: 10 EYQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTFIVRTRTEA 69 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA LR ++ PI DIA +GY S + S+VFR+ + +P +YR+ Sbjct: 70 AARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNN 114 >UniRef50_B6R4C2 Transcription activator, effector binding n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4C2_9RHOB Length = 296 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + I + +I+ +I + L++ +A + +S ++ R+FR +T +T+ + + R+ A Sbjct: 11 YTQRINRAMDYIERNICEELSLAQIADAACFSPYHFHRIFRAMTGETVNQFTSRLRVEKA 70 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L+ I D A+D+G+ S TF+R F+ +F S +R Sbjct: 71 ARRLKQNPSISITDAALDMGFASPSTFARSFQARFGMPASQWRR 114 >UniRef50_C5EUD7 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUD7_9FIRM Length = 286 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 62/106 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 + + ++I+ + +I+++I PL + +A+ S YL ++ VT + + DYI++RR+ Sbjct: 173 LEYHEVIKKVENYINQNISGPLPLKDIAQHVFMSSAYLSTTYKNVTGRNITDYIQERRVS 232 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +RTT I DIA + G+ F++VF+++ TP +YR R Sbjct: 233 AACFLIRTTSGSISDIAQETGFSDANYFTKVFKKKTGMTPREYRQR 278 >UniRef50_C8QFY6 Transcriptional regulator, AraC family n=3 Tax=Enterobacteriaceae RepID=C8QFY6_9ENTR Length = 142 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 72/107 (67%), Positives = 86/107 (80%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++II L WID+++D+ L+ID VA KSGYSKW+LQRMFRTVT QTLG YIR+RRL Sbjct: 1 MMQEEIIHSLTHWIDQNLDKTLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 LAA LR T+RP+FDIAM GY SQQTFSRVFRRQF +TP+ YRH + Sbjct: 61 LAAEALRQTQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRHTM 107 >UniRef50_A6GAG6 Transcriptional regulator, AraC type n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAG6_9DELT Length = 279 Score = 139 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 61/104 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I ++ + H+D+ ++ + +A +G S + R+FR +T +++ ++R+ RL A Sbjct: 7 WGQRILRVVDHVQAHLDEDVDPETLADIAGLSLHHFHRVFRGLTGESVMGFVRRLRLERA 66 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A++L+ E P+ +A++ GY S + F+R FR +F P YR + Sbjct: 67 AMQLKLGEAPVTQVALEAGYGSHEAFTRAFRNRFGVPPRAYREQ 110 >UniRef50_Q5WGK8 AraC/XylS family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WGK8_BACSK Length = 280 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 37/99 (37%), Positives = 62/99 (62%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 + D I +I+ H+D L +D +A + S+++ QRMFR +T + +YIR RR+ +AA EL Sbjct: 1 MLDSIEYIENHLDNELLLDEIAAVACMSRFHFQRMFRMLTGYAVSEYIRNRRITVAAQEL 60 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 ++ + D+AM GY S ++F++ FRR +PSD + Sbjct: 61 VHSKSKVIDVAMKYGYESPESFTKAFRRIHGISPSDAKK 99 >UniRef50_UPI000174581F Two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174581F Length = 268 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 58/101 (57%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ I +H+ QPL ++ VA+ SG S ++ ++F+ T T +Y+ + R+ A L Sbjct: 155 VRRARQHITQHLAQPLCLEEVARHSGVSPFHFCKIFKRFTGLTFTEYVNRARVEKAKQLL 214 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + + ++A D+G+ S F+R FRR D++P+++R + Sbjct: 215 IKPQSRVTEVAYDVGFQSLSQFNRSFRRVMDQSPTEFRSSM 255 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 58/106 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 Q ++ ++ +H +PL +D +AK G S +Y+ ++F+ T +Y+ Q R+ Sbjct: 412 DEQSLMLLARDYVHDHFREPLTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRVEH 471 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L T++ + +I ++GY FSRVF++ ++PSDYR + Sbjct: 472 AKQLLSLTQKSLKEITYEIGYKDPNYFSRVFKKLTGKSPSDYRKSI 517 >UniRef50_A4B9Y7 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y7_9GAMM Length = 297 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 58/100 (58%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + IQ L+ I+ ++ +N+ +A S W+ QR F+++ TLG YIR RRL AA Sbjct: 6 QHIQTLVDRIEANLADDVNVLGLADAFHMSPWHFQRTFKSLIGDTLGGYIRGRRLTRAAQ 65 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L + R + DIA+ +G+ S + FSR F+ F+ TP +R Sbjct: 66 LLLESRRSVIDIAVSVGFNSHEAFSRSFKAYFNVTPKAFR 105 >UniRef50_C0CY04 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0CY04_9CLOT Length = 295 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 65/103 (63%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H ++ I +I+ H+D+ +++ V+++ GYS +++ R+F V + +G YI +RRL A Sbjct: 10 HLTPLERAIEYIETHLDENIDLGDVSREMGYSYYHMTRLFSAVLGEPVGRYISRRRLYRA 69 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A +L ++R I DIA++ G+ S + FSR F+ F TP+ YR Sbjct: 70 AQQLVHSDRRIIDIALESGFQSPEAFSRAFKALFKTTPAGYRK 112 >UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B1U3_9CHRO Length = 298 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 53/103 (51%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 K ++ + +I E + Q +++ ++ + S+++ R F+ +T T Y+ ++R+ A Sbjct: 196 SKRLKPVFDYIHEFLSQDISLSTLSSIANMSQYHFSRTFKEMTGLTPHQYVIRQRVERAK 255 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L ++ I D+A+ G+ Q R F+R TPS +R + Sbjct: 256 QLLLQSKMSINDVAIACGFTHQSHLHRHFKRLIGVTPSAFREK 298 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 53/102 (51%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ W+ H +PL + A +S + R FR +T Q+ ++ + RL AA Sbjct: 184 QRLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAE 243 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LRTT+ + IA G+ + F+R F+ F TP DYR + Sbjct: 244 ALRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 54/103 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++ ++ +IDEH+ L + +A+ + S+ + R F+ +TH+ Y+ +RR+ AA Sbjct: 191 DTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAAD 250 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ R I I MDLG+ F +VFR TP YR L Sbjct: 251 LLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 293 >UniRef50_UPI000178A004 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A004 Length = 514 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 59/100 (59%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ + WI +H+ +P+++ V+A++ G S Y+ ++FR T T+ YI + R+ A L Sbjct: 414 IRLAVQWIKDHLKEPISLPVIAEQVGLSPHYISKLFREETGSTVNQYITRLRMEKAIELL 473 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 R + + +++IA ++G S + F+ FR +P+DY+ Sbjct: 474 RHSNKKVYEIAEEVGIPSYRYFTVTFRNWTGVSPTDYKRN 513 >UniRef50_C6CRY2 Transcriptional regulator, AraC family n=69 Tax=Bacillales RepID=C6CRY2_PAESJ Length = 301 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 70/105 (66%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + IQ I +I+ HI + L++ +A+ + S ++ R+F+++ +T+ +Y+R+RRL + Sbjct: 4 DYLAQIQQTIDYIEAHISEELSLSRLAQVAKLSDFHFHRVFQSMAGETVMEYVRKRRLAI 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +A ++ ++ + DIA+D G+ + +TF+R F+R F+ TP++YR R Sbjct: 64 SAYQVANSDAKLIDIALDTGFQNHETFTRAFKRMFEMTPAEYRKR 108 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 56/104 (53%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + + +I+EH +PL+++ VA +G+SK++ R+F+ T Y+ Q+R+ Sbjct: 178 EYMEKFLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAH 237 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L + DI++ G+ + +F R+FR+ TP++ R Sbjct: 238 AKHLLVDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRK 281 >UniRef50_C1P7P5 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7P5_BACCO Length = 292 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 58/103 (56%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S +K I+ + +I +HI QP+ ++ VA S +Y ++F+ T +T ++ ++++ L Sbjct: 183 SSKKEIKQALQYIQKHIHQPVTLEEVAGHVYLSPYYFSKLFKKETGETFVSFVNRQKMNL 242 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L + P+ IA LG+ FS+VF+R + TP+ YR Sbjct: 243 AKDMLANDDLPVSYIAHSLGFREISYFSKVFKRYYQTTPTSYR 285 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 50/98 (51%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I +I +I+++ ++ + +D VAK+ S Y + F+ T + DY+ R+ A L Sbjct: 427 IAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFIDYLTNLRVTKAKELL 486 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 I ++ +GY FS++F++ TP++YR Sbjct: 487 EDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEYR 524 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 58/103 (56%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I+ ++ +IDEH D+ L I +A S+ + R F+++ T +YI +RL A Sbjct: 185 QIRQIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKA 244 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A LR T+R I DI+M +G+ F ++F+R TPS++R Sbjct: 245 ARLLRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 55/101 (54%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 II D+ ++++H +++ +A K S+ Y+ R F+ TL D++ + R+ A Sbjct: 435 IIHDIAQYLEQHYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLSDFLGRIRIEKAKTL 494 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + I IA +GY ++ FS+VF++ TP++YR + Sbjct: 495 LLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKK 535 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 47/96 (48%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 + A+ID H + + + +A + ++ +YL FR + YI +RR+ A L T Sbjct: 143 VKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREHIGYSPMQYIIRRRIGEAQNLLIGT 202 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +R I +IA GY + F VF+R TP YR Sbjct: 203 DRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRR 238 >UniRef50_C6LLM9 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLM9_9FIRM Length = 516 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 57/104 (54%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +I+Q++ +I EH + +N++ +A + S YL +F+ T + Y+ R+ A Sbjct: 403 SRIVQEIKRYIQEHYAENINLNALADQVYLSPKYLSDLFKRETGENYTSYLLYVRMEHAK 462 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L + I+++A GY S + F RVF+++ TP +YR+++ Sbjct: 463 KYLMQFDLKIYEVAELTGYASPKQFIRVFKKEVGVTPGEYRNQV 506 >UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD4_9CLOT Length = 532 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 53/102 (51%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + ++ + +I EH + + ++ +A + YL MF+ T QTL Y+ R+ A Sbjct: 428 SRPVRMIKEYIGEHYSENITLNDIADIVFLNPAYLSAMFKKETGQTLTQYLIDVRIDKAK 487 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LR ER I +IA +GY ++ FS++F + P++YR Sbjct: 488 EMLRNPERTIGEIACMVGYQDERHFSKLFSKMTGVKPTEYRR 529 >UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=Q13QC7_BURXL Length = 307 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 54/100 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ + +I ++ L I +A ++G S ++ R+FR T +T ++ + RL AA Sbjct: 205 RRIRRVTDYIRANLAGDLAISELAAQAGLSSFHFARVFRRETRETPHRFVTRLRLEEAAR 264 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L T++ + IA+ +G+ + FS F+R + TP YR Sbjct: 265 LLHATDQTVLQIALAVGFENASHFSVQFKRDYGVTPLAYR 304 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 54/99 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + +++I++I+++ + + ++ +A + G ++ Y R F+ T +T +Y+ R+ A Sbjct: 181 RRFKNVISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACE 240 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 + +T+ + DIAM G+ F +VF+ TP DY Sbjct: 241 LIASTDEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDY 279 >UniRef50_B2IKR9 Transcriptional regulator, AraC family n=4 Tax=Rhizobiales RepID=B2IKR9_BEII9 Length = 292 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 53/100 (53%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ +I+ + + +D +A ++ S ++ R+F+ T + Y+ RR+ A Sbjct: 188 RRLKRVLDFIEARLATDIALDDLAAEACLSPFHFSRLFKDATGLSPHRYVTDRRVQAARD 247 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 +L + +IA+D G+ SQ F RVFR+ TP YR Sbjct: 248 KLALRHSSLIEIALDTGFGSQANFIRVFRKATGLTPGQYR 287 >UniRef50_C5RJ15 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ15_CLOCL Length = 290 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 35/104 (33%), Positives = 60/104 (57%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I +I+E++D + + VA+++ S+++ RMF +T L +YIR+R+L Sbjct: 7 MVWLDRMNSAINYIEENLDGEIEMGEVARRACCSEYHFTRMFSFITDIPLNEYIRRRKLT 66 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LA EL+ ++ I D+A GY S +F+R F+ TPS+ R Sbjct: 67 LAGFELKNSDIKIIDLANKYGYDSPNSFTRAFQGMHGVTPSEAR 110 >UniRef50_A0KJN2 Transcriptional activator n=5 Tax=Gammaproteobacteria RepID=A0KJN2_AERHH Length = 325 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 64/105 (60%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S I+ ++ +I ++D PL + +A++S +S+W LQR+F T T+ Y+R+ +L Sbjct: 42 SQLTRIERVLDYIHANLDLPLGLAELAEQSCWSRWQLQRVFLHETGLTVAHYVRELKLSQ 101 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA L + + + D+A+ G+ S+ +FSR F++QF +P YR R Sbjct: 102 AAEALLSGRQRVLDLALCYGFGSEVSFSRAFKQQFGCSPLAYRKR 146 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 54/101 (53%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +Q + + ++ P ++ +A+ G S W+L R F+ T + ++ +R+ A Sbjct: 206 KLQKVKQHLQANLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSEWFIHQRIQRACRL 265 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LR T P+ DIA ++GY S FS+VFRR+ P+ YR R Sbjct: 266 LRETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYRRR 306 >UniRef50_A4XFU2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFU2_CALS8 Length = 508 Score = 138 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 56/103 (54%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H+KII+D I +I+ + + + +A+ G S Y ++F+ T ++ D++ + R+ A Sbjct: 402 HKKIIKDAITYIERNYANQIFLSDIAEVCGVSPNYFCKIFKEETGKSFVDFLNELRINKA 461 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L +T +++A +G+ + FS +F++ +PS ++ Sbjct: 462 KELLLSTNLKSYEVAEKVGFNDYKYFSMIFKKYTGTSPSKFKE 504 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 138 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 53/103 (51%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++ ++ +ID H+ L + +A+ + S+ + R F+ +TH+ Y+ +RR+ AA Sbjct: 235 DTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAAD 294 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ R I I MDLG+ F +VFR TP YR L Sbjct: 295 LLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 337 >UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C647_ACAM1 Length = 204 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 53/101 (52%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q+ + ++ +ID H+ + + +A S+++ R+F+ ++ Y+ +R+ A Sbjct: 102 QRQLLKVLDYIDAHLGNEITLADLAVLVDISQFHFGRLFKQSLGRSPYQYLMLQRVERAK 161 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+ T +PI +IA++ G+ S F R FR+ TP YR Sbjct: 162 TLLKRTNQPIVEIALECGFNSHSQFGRKFRQMTGMTPKVYR 202 >UniRef50_B5XU59 Transcriptional regulator, AraC family n=33 Tax=Gammaproteobacteria RepID=B5XU59_KLEP3 Length = 289 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + Q + +I H+D+PL+++ ++ + S ++ R F T L YI+ RL A Sbjct: 10 YVGRFQRVCRYIARHLDEPLSLEALSAIAHSSPYHFHRQFSAYTGIPLYRYIQWLRLRRA 69 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + DIA+D G+ + ++FSR FR FD++P+ +R + Sbjct: 70 CWRLAFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQ 114 >UniRef50_C8QBQ6 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QBQ6_9ENTR Length = 288 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 72/102 (70%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ I DL+ WI+ ++ LNID+++ KSGYSKW++QRMF+ +T QTL Y R+RRL ++A Sbjct: 8 KQYINDLVDWIEANLTDELNIDLISLKSGYSKWHMQRMFKEMTGQTLASYTRKRRLTMSA 67 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + LR T P+ DIA+ G+ +QQ F+RVF+ F TP YR Sbjct: 68 MALRLTRMPLIDIAVRFGFDNQQNFTRVFKNHFSLTPGAYRR 109 >UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDY5_9LACT Length = 512 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 57/105 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + IQ +I +ID H + L+ +A S +L R+F+ T +TL YI +R+ Sbjct: 405 NQKNSIQRIIEYIDHHYKEDLSRSTLADMVYLSADHLARIFKKETGETLVKYITDKRINA 464 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 + L T+ PI +A ++GY + F+++F+ + +P DYR + Sbjct: 465 SKELLSETKTPIAQVASEVGYDNYSYFTKIFKEKIGVSPGDYRKQ 509 >UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMJ8_9FIRM Length = 283 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 44/97 (45%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 + +ID H + L + +A+ + +YL F+ +T + YI +RR+ A L T Sbjct: 183 RIKEYIDAHYLEDLKLADIAEALHINLYYLSHTFKDLTGSSPMQYIIRRRIEEAQTLLLT 242 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 T I DIAM GY + F VF P YR Sbjct: 243 TNMTITDIAMQCGYNNSNYFQSVFSNIVGMPPGKYRK 279 >UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 Tax=Clostridium RepID=Q0TRX2_CLOP1 Length = 250 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 60/104 (57%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + +KI+ + +ID+++D+ L ++ +A S Y R+F+ T +T+ YI ++++ Sbjct: 146 NEEKIVDKVSKYIDDNMDKMLKLEELASICNLSPGYFSRVFKKETGKTVITYINEKKVER 205 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L+ ++ PI +I++DLG+ F RVF++ TP +R Sbjct: 206 AKKLLKESKDPIINISLDLGFDDCGYFIRVFKKITGLTPKAFRE 249 >UniRef50_C6CVB2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVB2_PAESJ Length = 542 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 61/103 (59%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +H I++ + ++ID ++ + +++ +A YL ++++ T + L +Y+ + R+ Sbjct: 433 NHSTIVRAVRSFIDANLAKDVSLPAIADHVHLHPVYLSKIYKAETGEPLTEYVYRLRMEK 492 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA LRTT +F+I+ +GY + F RVF++ FD TP +YR Sbjct: 493 AAFLLRTTPSKVFEISEIVGYNNTAYFIRVFKKFFDVTPQEYR 535 >UniRef50_C6J7M7 Response regulator n=2 Tax=Bacillales RepID=C6J7M7_9BACL Length = 531 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 56/102 (54%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 Q +I +I + + L+++ VA+++ S + +F+ VT T +Y+ + R+ A Sbjct: 427 QNVIAKTQEYILSNYHKDLSMEEVAERADLSISHFCLLFKQVTGYTFLEYLTECRIEKAK 486 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ ++ ++ +A +GY + F++VF++ TP++YR Sbjct: 487 YILKNSQVKVYQVAPMVGYQDPRYFTQVFKKVTGMTPTEYRE 528 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 52/100 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 K I+ ++++I + + + I+ +A YSK Y + F+ + Y+ RL +AA Sbjct: 194 KKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAE 253 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L TT I DIA G+ + F+R F++++ +P YR Sbjct: 254 LLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_A8I184 Transcriptional regulator n=3 Tax=Rhizobiales RepID=A8I184_AZOC5 Length = 310 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 50/101 (49%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ +I +I++++ +++ ++ + S + R FR+ +I RL A Sbjct: 207 KMRRVIDYINDNLASEISLSDLSDIACLSHHHFARAFRSAVGVPPHRFISSLRLQRAQEM 266 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ + +IA + SQ TF+R FRR +P +YR + Sbjct: 267 LAHTQSSLTEIAYSCRFSSQSTFTRAFRRHVGMSPGEYRRK 307 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 62/103 (60%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ +I ++++HI+ L++ AK + S ++ R+F+ V +T +Y R+ A Sbjct: 176 ERIKPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEK 235 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L TT+R I +IA + G+ S F+RVF+++ + P++YR ++ Sbjct: 236 LLITTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKKM 278 >UniRef50_C6IVE2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVE2_9BACL Length = 215 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 53/100 (53%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ L+ +I+EH +PL + +++ ++ YL F + +Y+ + R+ A L Sbjct: 110 MKLLLDYIEEHYGEPLTLSSLSRHFHFNPSYLSSYFSAHNDEGFSEYLNRVRIAKAKELL 169 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 R+ PI +I +GY F++VF++Q +P +YR + Sbjct: 170 RSDGLPISEIGSRVGYSDPSYFTKVFKKQMGLSPREYRRQ 209 >UniRef50_C6D3W5 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3W5_PAESJ Length = 421 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 59/104 (56%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H+K +Q +I ++ H + + ++ +A + SK YL ++F+ VT +T +Y+ + R+ A Sbjct: 318 HRKAVQYMIEYVHTHYAEDITLEQLASQLYISKNYLNQLFKKVTGETFTNYVIRVRIEKA 377 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 V L + I++++ +GY + F+ +F++ TPS+ + Sbjct: 378 KVLLLEGKHLIYEVSEMVGYQNVPYFTTLFKKYCGVTPSELMKQ 421 >UniRef50_B4EVW5 AraC-family transcriptional regulator n=3 Tax=Proteus RepID=B4EVW5_PROMH Length = 304 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 49/103 (47%), Positives = 73/103 (70%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + ++I++L+ WI+ ++++PL +D VA KSGY+KW+LQR+F+ T TL YIR RRL A Sbjct: 18 NIEVIKELLLWIEVNLEKPLLLDDVAIKSGYTKWHLQRVFKQATGLTLASYIRGRRLTKA 77 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A ELR T+ P+ IA+ + SQQ+F+R F+ F TPS+YR Sbjct: 78 ATELRLTKLPVLTIALRYQFDSQQSFTRRFKAVFGVTPSEYRK 120 >UniRef50_A7FVD8 Transcriptional regulator, AraC family n=4 Tax=Clostridium RepID=A7FVD8_CLOB1 Length = 294 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 65/105 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++ + + +I+ ++ +NID ++K + S+++ QR+F ++T T+ YI+ RRL Sbjct: 1 METIMLLNNTLEYIERNLHTAINIDDISKVACSSRYHFQRVFHSLTGFTVTQYIKNRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL +T+R I DIA+ GY S + F++ F+R +PS + Sbjct: 61 LAAEELVSTDRRIIDIALKYGYESPEAFTKAFKRLHGISPSALKK 105 >UniRef50_B2VKB8 Regulatory protein SoxS n=1 Tax=Erwinia tasmaniensis RepID=B2VKB8_ERWT9 Length = 141 Score = 137 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 70/105 (66%), Positives = 82/105 (78%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H II L WID ++ + L+ID VA KSGYSKW+LQRMFRTVT QTLG YIR+RRL LA Sbjct: 2 HDDIINTLTHWIDNNLGKNLSIDEVAAKSGYSKWHLQRMFRTVTKQTLGGYIRERRLTLA 61 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A LR + RP+FDIAM GY SQQTFSRVFRRQF +TP+DYR+ + Sbjct: 62 AEALRQSHRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTDYRNTM 106 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 137 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 55/101 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ +++++ EH ++I+ +A YSK Y + F+ + Y+ RL +AA Sbjct: 189 EKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAK 248 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L TT I +IA++ G+ + F+R F++++ TP YR Sbjct: 249 LLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRK 289 >UniRef50_C6CTP9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTP9_PAESJ Length = 537 Score = 137 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 57/102 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 I++D+ +++++ ++ + + ++++ S+ Y+ R F+ + + DY+ + R+ A Sbjct: 435 HSIMRDIARYMEQNYNREVTLQDISERFYLSREYISRRFKQEMGENVFDYLGRIRVEKAK 494 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + L+ I IA +GY + FS+VF++ ++P+ YR Sbjct: 495 LLLQNPNLKIAQIAEMVGYDDDKYFSKVFKKFEGQSPNQYRK 536 >UniRef50_C6CZ23 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ23_PAESJ Length = 522 Score = 137 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 53/100 (53%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 ++ L+ +I EH + LN+ +AK ++ YL F T ++ DY+ + RL A+ L Sbjct: 420 MKRLLDYIHEHYAESLNLTEMAKHFHFNPSYLSSYFSTHHNEGFVDYLHRVRLEKASELL 479 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 R E I +I+ +GY F +VF++ +PS YR + Sbjct: 480 RAGEASISEISGMVGYSDHSYFCKVFKKHTGLSPSRYRQQ 519 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 137 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 48/98 (48%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++++++ +I+ H + + + +A+ +G S Y F +T +T DY+ R+ A Sbjct: 182 LLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCL 241 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 L I DIAM G+ F+R F++ +P Y Sbjct: 242 LAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQY 279 >UniRef50_D1PRZ9 DNA-bindng response regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PRZ9_9FIRM Length = 248 Score = 137 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 56/103 (54%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++ K I + +I HI + + I+ +A + G S YL R+F+ T ++ YIRQ+++ + Sbjct: 136 TNSKHINEGKDYIYAHIKERITIEDLADELGVSPSYLSRLFKKETGMSVSAYIRQQKIEI 195 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A LR ++ + DIA L + SQ F + FR TP YR Sbjct: 196 AKNLLRFSDSSLIDIANQLAFSSQSHFIQQFREVTGMTPKKYR 238 >UniRef50_A8TTK0 Transcriptional regulator, AraC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTK0_9PROT Length = 330 Score = 137 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 67/102 (65%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ + ++ I ++D+ +++D +A + +S+++ R+FR +T +T+G+++R+ +L A Sbjct: 38 YESRLLRVLVHIQRNLDRAMSLDELADVAAFSRFHFARIFRAMTGETVGEHVRRLKLERA 97 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A +LR T + + +IA+D G+ + + FSR F+ QF PS +R Sbjct: 98 AGKLRHTRQTVTEIALDAGFDTPEAFSRTFKAQFGDPPSRFR 139 >UniRef50_B0PFD6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFD6_9FIRM Length = 440 Score = 137 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 55/99 (55%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 I D++ +I +H + +++D +A+ S +SK++L + F+ T ++ +YI R+ A Sbjct: 334 DPIDDVLDYIHQHYREQISLDDLARISNFSKYHLCKKFKEKTKTSIINYILMVRIDKAKE 393 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 L + IF IA +G+ F+R+F++ TP ++ Sbjct: 394 LLLQNQDRIFVIAQKVGFNDTSYFNRIFKKVTGYTPKEF 432 >UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2P5_PAESJ Length = 189 Score = 137 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 49/96 (51%) Query: 9 DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRT 68 A+I+ H + L + +A S ++LQR F+ +T T YI+Q R+ A L + Sbjct: 88 QARAYIEAHYYEQLTLSHLADVLHLSPYHLQRTFKRLTGLTPAAYIQQIRIREAMKLLAS 147 Query: 69 TERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T P+ DIA +GY + F+ F+ TP+ YR Sbjct: 148 THLPVTDIAGQVGYTNAAHFTTRFQNVTGLTPTQYR 183 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 59/102 (57%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + I+ LI +I+ H L ID +++ GYSK + +F+ T + +++ Q RL A Sbjct: 189 EKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACE 248 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L + RPI +IA ++G+ + F+R F+R ++ TPS YR + Sbjct: 249 LLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKK 290 >UniRef50_C5RP62 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RP62_CLOCL Length = 292 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 38/105 (36%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M +Q+ I +++++I + +N D +A+ + S ++ QRMF +T T+G+YIR RRL Sbjct: 1 MDWINSMQNAINYMEDNILEEINYDKIAQCAYSSTYHFQRMFSMLTGFTVGEYIRNRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL ++ I DIA+ GY + + F++ F+R TP+ R Sbjct: 61 LAAQELSFSKERITDIAIKYGYGTSEAFTKAFQRFHGITPTAARE 105 >UniRef50_B7GST4 Transcription activator, effector binding n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GST4_BIFLI Length = 286 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 67/105 (63%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M ++ I +I+ H+++ + ++ V++++GYS +Y+ R+F +V +++G YI +RRL Sbjct: 1 MKRYPPLERAITYIEAHLNEYIGLNEVSRETGYSYYYMTRLFSSVLGESVGHYINRRRLY 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A+ +L +++ + DIA+D GY S + FSR F+ F +P YR Sbjct: 61 NASEKLIHSDQKVIDIALDCGYESSEAFSRAFKAVFGYSPVAYRK 105 >UniRef50_A9KFE4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A9KFE4_COXBN Length = 284 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+++ + +I +I +H+D+ L + ++ + +SK++ R+F T +L YIR RL Sbjct: 1 MNYEYQLIKVIEFIGKHLDEKLTLAQLSDVACFSKYHFHRLFTAYTGLSLQQYIRWLRLK 60 Query: 61 LAAVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 AA +L ++ I +IA++ G+ S + F+R F++ +P+ + Sbjct: 61 RAAHQLIVDKDKTIIEIAINAGFESNEAFTRAFKQVCGVSPTKF 104 >UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C020E Length = 420 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 51/101 (50%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ +I +I+ + + +++ VAK + Y +F+ T + Y+ + R+ + L Sbjct: 320 IRKVINYINTYYAEEISLHKVAKLVHLTPSYFSTVFKKETGYSFTQYLNKVRIEHGKLLL 379 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 T + ++A+++G+ + F VF++ TP+ +R + Sbjct: 380 MDTSMTVLEVAIEVGFDTDTYFCTVFKKVVGVTPNQFRKSM 420 >UniRef50_C6J6V9 Response regulator n=2 Tax=Bacillales RepID=C6J6V9_9BACL Length = 517 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 55/103 (53%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + ++I++++ +I+ H L++ + A S Y+ R+F+ Q L DYI + R+ A Sbjct: 412 YSQLIRNILEYIEHHYQDSLSLKLFADLFQVSPNYVSRLFKEEVGQGLFDYINELRINKA 471 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ I+++A +G+ +Q F+ VF + +P YR+ Sbjct: 472 KELLKDYRYKIYEVAEKVGFSNQAHFAIVFNKYTGVSPKQYRN 514 >UniRef50_Q21A44 Two component transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q21A44_RHOPB Length = 359 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 51/101 (50%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +Q I +I+ ++ + + ++ A + S YL RMF+ Y+ RR+ LA Sbjct: 238 TVQKAINYIERNLSKRVTLEDAADYAKISACYLSRMFKKTLDVNFVTYLTTRRMELAKEL 297 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L TER I +IA + Y F + F+++ +PS+YR + Sbjct: 298 LAGTERSITNIAKEFSYNDLNYFCKSFKKEIGVSPSEYRRQ 338 >UniRef50_C2LM40 Right origin-binding protein n=2 Tax=Proteus mirabilis RepID=C2LM40_PROMI Length = 298 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 74/106 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + +++D+I WI++++D L++D++A+KSGY+KW+ QR+F+ T +LG Y+ RRL Sbjct: 1 MLQENVVKDIIVWIEQNLDSRLSLDIIAEKSGYTKWHFQRLFKAYTGISLGKYVLARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A LR T + DI++ + SQQTF R F++QF+ TPS+YR + Sbjct: 61 CGAYALRITRSSLLDISLKYHFDSQQTFCRAFKKQFNITPSEYRKK 106 >UniRef50_A6EIJ9 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIJ9_9SPHI Length = 309 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 H K + ++ ++++H+++ L+++ +A + YS ++ R+FR+V +++L YI ++R+ Sbjct: 10 DHIKRLNKVLQFVEDHLEEELSLEKIAAIACYSPFHFHRIFRSVVNESLNVYIVRKRIEK 69 Query: 62 AAV-ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +R I ++++ G+ +FSR F++ + +PSD+R + Sbjct: 70 AASILIRKPGISITELSVMYGFNGNTSFSRAFKKYYGMSPSDFRAQ 115 >UniRef50_Q5WCU8 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU8_BACSK Length = 187 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Query: 1 MSHQKI-IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 MS ++ +Q ++++I+ H + L ++ + + SK++L ++F+ +T T+ Y+ QRR+ Sbjct: 77 MSQKEKTVQAVVSFIESHYHEHLGLETIEEALHVSKYHLSKVFKEMTGVTIFKYLYQRRV 136 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A +EL ++ I DI +G+ F++VF++ TP+ Y+ + Sbjct: 137 NQAKIELLVSDASITDICYQVGFHYPSHFTKVFKQFTGITPAQYKRQ 183 >UniRef50_UPI0001789620 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789620 Length = 540 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 51/104 (49%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S + + + ++ +DQ + +D VA + Y RMF+ T T +Y+ + ++ Sbjct: 436 SRRSEVAEACKYVSLRLDQRITLDDVAGCLHLNPSYFSRMFKKETGVTFIEYVTRMKMER 495 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A LR T+R + +I L Y + FS+ F+ TP ++R+ Sbjct: 496 AKELLRQTDRTVGEICESLAYDNVSYFSKTFKAYAGVTPVEFRN 539 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 53/101 (52%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + D+I ++ EH + + ++ +A S+++L R F+ T T+ YI R+L Sbjct: 163 EQRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLH 222 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD 102 A L+ ++ I +I+ +G+ + F+RV++ +PS Sbjct: 223 AQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQ 263 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 50/103 (48%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S + I + +I+++ ++P+ + VA S+ FR T+ T DYI R+ Sbjct: 176 SKSRRIAKVCDYIEKNFEEPIKLGDVAALVNMSESAFSHFFRKKTNCTFIDYINNLRVAR 235 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L T + +I G+ + F R+F+++ TPS+YR Sbjct: 236 ACQMLTETSHTVAEICYSCGFNNLSNFIRIFKKKKGNTPSEYR 278 >UniRef50_A6M032 Transcription activator, effector binding n=19 Tax=Bacteria RepID=A6M032_CLOB8 Length = 285 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 63/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I + I++I+E+I + + I +A+K+ S +Y Q+ F + T+G+YIRQRRL Sbjct: 1 MKWIEGIGEAISYIEENITEEITIKNIAEKTFMSPFYFQKGFAMLCGFTVGEYIRQRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LA +L +T+ I DIA+ GY S +F++ F R TP+ R Sbjct: 61 LAGSDLVSTDEKIIDIALKYGYASPDSFTKAFTRFHGVTPTAVRK 105 >UniRef50_C6CVC0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVC0_PAESJ Length = 539 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 47/104 (45%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + ++ +I H + L + +A S+ Y+ +F+ T +Y+ Q R+ A Sbjct: 432 YGEAVERACEYITLHYAEDLMLQDIADHVHLSRTYISELFKKETGMNYNEYLMQVRMEKA 491 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L+ + D A +GY + F ++F+ +PS+Y + Sbjct: 492 KELLKRQTLKVADAAALVGYSNTSYFIKLFKNYTGLSPSEYMEQ 535 >UniRef50_A9U7E9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7E9_PHYPA Length = 399 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 58/101 (57%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 H++ ++ +I +I EH + +++ VA + SK YL +FR T +T GDY+ + R+ A Sbjct: 296 HKETVEFIIQYIHEHYAENIHLQDVADQVYISKNYLSTLFRQFTGETFGDYLTRVRMEKA 355 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 + + I +IA +GY + F+ +F++ R+P+++ Sbjct: 356 KSMVLEKKLLIAEIAERVGYRNVPYFTTLFKKHTGRSPTEF 396 >UniRef50_C6D6F5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6F5_PAESJ Length = 778 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +++I+ + ++ ++ Q +++D A+ G + +YL + F+ VT + DY+ + R+ A Sbjct: 673 KRLIEAAMIYMQQYYRQDISLDNCAEHIGTNPFYLSKSFKVVTGKNFIDYLTELRIERAK 732 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LR +E I D+A +GY F+R+F++ TP+ YR + Sbjct: 733 ELLRESELKINDVAEQVGYQ-HSYFNRIFKKLEGMTPTSYREQ 774 >UniRef50_A3ZMZ0 Transcriptional regulator, AraC family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMZ0_9PLAN Length = 286 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 59/101 (58%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 ++ I + I H+D+ L+++ +A + YS + R+FR + ++ DY+R+ R+ A Sbjct: 8 YEAKILRVQLLIQHHLDEDLSLEHLAAAADYSPCHFHRIFRGIVGESADDYVRRLRMERA 67 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A LR R + DIA+D GY S + F+R F R F TPSDY Sbjct: 68 AQSLRYRRRSVLDIALDAGYGSHEAFTRAFVRTFGVTPSDY 108 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 51/106 (48%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 Q ++ +I +I E+ P+++ +AK S Y F+ + +I + R+ Sbjct: 183 DSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQK 242 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L +E P+ +A+ +G+ + F R FR + TP++YR L Sbjct: 243 ACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_A8S8J9 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8J9_9FIRM Length = 351 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 ++ ++ + +I +H+ Q + + +A S Y R F T ++ +YI RR+ Sbjct: 239 VNPSSVVYPAVVYIRDHLQQEITMKEMADLCHLSPSYFSRTFNKETGESFVNYISSRRIQ 298 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LA L T + I IA ++GY + F+ VF+R PS YR Sbjct: 299 LAKELLLETGKSISQIAEEVGYDNISHFTAVFKRTEGIPPSVYR 342 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 55/103 (53%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ ++ ++DEH + +++D +A++ SK+YL R F+ T+ Y+ +R+ A Sbjct: 189 SDKLKTILHYLDEHYTENISLDQLAEQFFISKYYLSREFKKEFGTTVIQYVLAKRINNAK 248 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 LR + I +IA G F++VFR+ T S+YR R Sbjct: 249 ELLRYSNSSIEEIAHLCGIDDASYFNKVFRKMEGCTASEYRKR 291 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 55/101 (54%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ ++ +I E+ + + ++ V+K S +YL ++F+ T DYI ++ A Sbjct: 245 LLNPVLIYISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKIEKAKQL 304 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ I +I+M LGY FS+VF++ TPS YR++ Sbjct: 305 LENTDMSIINISMSLGYDESGYFSKVFKKVVGVTPSAYRNK 345 >UniRef50_B7K731 Transcriptional regulator, AraC family n=2 Tax=Cyanobacteria RepID=B7K731_CYAP7 Length = 309 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 51/95 (53%) Query: 10 LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTT 69 + +I++++ + + +++ G S+++ R+F+ + Y+ ++R+ A + L+ + Sbjct: 209 ITDYINDNLAGEIKLSNLSELIGISQFHFSRLFKQTVGISPHQYLMRQRIERAKLLLKNS 268 Query: 70 ERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 + ++A+ G+ S F + FR+ TP +YR Sbjct: 269 PLSVVEVALSCGFSSHSHFGKYFRQITGLTPKEYR 303 Score = 42.1 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSK-WYLQRMFRTVTHQTLGDYIRQRR 58 ++ I+ + PL++ VA G+S + + FR +T T +Y RR Sbjct: 255 RQRIERAKLLLKN---SPLSVVEVALSCGFSSHSHFGKYFRQITGLTPKEYRVNRR 307 >UniRef50_UPI0001C358FB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358FB Length = 273 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 51/100 (51%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++I+ + ++++H + ++++ +++ +K Y +F+ T ++ Y+ + RL A Sbjct: 162 SRVIRKALNYMEDHYHEDISLESISEVVFLNKNYFSELFKKETGKSFVQYLTEYRLEKAK 221 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 + L + ++A G+ + F VF++ TP +Y Sbjct: 222 LLLAISGFKGSEVADMTGFQNNSYFISVFKKYVGCTPKEY 261 >UniRef50_C6CRA3 Transcriptional regulator, AraC family n=8 Tax=Bacillales RepID=C6CRA3_PAESJ Length = 297 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 40/105 (38%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M H IQ I +I+E + + L+++ +A ++G+S ++ QR+F +T T+ +YIR+RRL Sbjct: 11 MEHYTRIQYAITFIEEQLQEALSLEAIAIRAGFSLYHFQRLFHAITGFTVQEYIRKRRLS 70 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA ELR T + DI++ Y SQ+ F+R F F P+ YR Sbjct: 71 RAAEELRVTRHTVLDISVSYQYGSQEAFTRAFAGYFGMAPAQYRK 115 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 52/99 (52%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ +I +I H + + +D +AK S YL +F+ T +Y+ RL + + Sbjct: 179 IEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRLKKSKELI 238 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 TT+ I +I+ +G Q FSR+F+++F +P +Y+ Sbjct: 239 ETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKK 277 >UniRef50_UPI00019685E3 hypothetical protein BACCELL_00469 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019685E3 Length = 329 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 64/103 (62%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S+ K + ++ +I ++ + + + +A + S ++ R+F++V ++ +G+Y+++ RL Sbjct: 49 SYLKPVNQVVDYIQSNLQEKIELTTLANLANISHFHFHRIFKSVMNENVGEYVQRVRLER 108 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA +L+TT + +IA +GY +Q S+ F++ F+ +PS YR Sbjct: 109 AAFKLQTTNLNLTEIAEQVGYQTQFALSKAFKKYFNISPSTYR 151 >UniRef50_B2TL55 Transcriptional regulator, AraC/XylS family n=2 Tax=Clostridium botulinum RepID=B2TL55_CLOBB Length = 282 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 1/105 (0%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + +I+++I + L+I+ VAK + S ++ QRM+ +T T+ +Y+R+RRL Sbjct: 1 MDWLDSMNKAVEYIEDNITEKLDIEKVAKIALSSPFHFQRMYHVITGVTIVEYVRRRRLT 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA ++ + E I ++A GY + + F++ FRR + +PS R Sbjct: 61 LAAQDIISGE-KIINVAYKYGYETPEAFTKAFRRMYGMSPSAARE 104 >UniRef50_Q97LX8 Transcriptional regulator (HTH_ARAC-domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97LX8_CLOAB Length = 288 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ + + + +++E++++ + VA + SK+Y R+F+ +T TLGDYIR+R+L Sbjct: 1 MNWIGDMNNALRYVEENLERNIESGEVANAAHMSKFYFLRIFKILTGMTLGDYIRERKLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LA ++ +T + I DI+ GY + + F++ F+R +P++ R Sbjct: 61 LATKDIVSTNQKIIDISYKYGYETPEAFTKAFKRLNGISPTEARK 105 >UniRef50_C1I6N3 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6N3_9CLOT Length = 288 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + I+ + +I+ ++ + +++ +AK++GYS ++ R+F+ + ++ DY+R+RR Sbjct: 4 MCYINSIKKALNYIENNLQEDIDLSAIAKEAGYSLYHFHRIFKGIVGDSMKDYVRKRRFT 63 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA EL T + I +I + GY S++ FSR F + + R PS+ R Sbjct: 64 EAAKELVYTNKSIVEIGIKYGYESREGFSRAFEKVYGRNPSEVRR 108 >UniRef50_Q9K9C1 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K9C1_BACHD Length = 510 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 53/102 (51%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 IQ ++A+I+EH +PL++ +A ++ YL FR + +Y+ + R+ A Sbjct: 399 SSSIQKMLAYIEEHHSEPLSLSQLANYFHFNPSYLSAYFRQHHDEGFSEYLNKVRIRKAK 458 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+++ PI +I +GY F +VF+++ PS YR Sbjct: 459 EWLKSSTIPISEIYALVGYSDHSYFCKVFKKRTGMPPSRYRR 500 >UniRef50_A8FZF8 DNA gyrase inhibitor n=13 Tax=Gammaproteobacteria RepID=A8FZF8_SHESH Length = 300 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 68/104 (65%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + ++ +I +++++ +QPLN+ VA K+ S ++ R+F+ VT++TL +Y+R+ RL Sbjct: 4 DYLQRLKPVIRYLEQNFNQPLNLPEVAAKANISPYHFHRIFKAVTNETLAEYLRRLRLER 63 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A +L + I ++A++ G+ S Q+ ++ F+++F TPS+ R Sbjct: 64 IATDLFYKQVSITELALENGFSSSQSLAKAFKQRFGLTPSELRE 107 >UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK33_BACSK Length = 294 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 57/103 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ + I +I+ + +PL ++ +A+++G+SK+Y + F+T + T +Y+ R+ AA Sbjct: 179 KEPLARAIRYIEANYARPLTLEEIAQEAGWSKYYFIKQFKTELNITPMNYVTIIRIKKAA 238 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 L T+ I ++A +G F++VF++ + S +R Sbjct: 239 SLLAQTDDTIAEVAYQVGMDDPNYFTKVFKKTVGVSASKFRKN 281 >UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ8_ALKMQ Length = 529 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 51/99 (51%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I +A+I +H ++ + ++ VA++ S Y + F+ T + DY+ + ++ + Sbjct: 426 LITKALAFIQKHYNENICLNDVAQEINMSYHYFSKFFKESTGKNFVDYLTELKIERSKEL 485 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+ I +I ++GY FS+ F++ TP+ YR Sbjct: 486 LKNQSISIKEICYEIGYSDPNYFSKAFKKITGVTPTAYR 524 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 54/100 (54%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ ++ I++ +PL + +A G S + R F+ +T + Y+ +RRL AA Sbjct: 269 ERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAE 328 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 LR T+ I IA + G+ + F+R F++++ TP YR Sbjct: 329 NLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 2 SHQKIIQ--DLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRL 59 +++I+Q ++ +I+++ P+ + ++ S Y R F +THQT DY+ ++R+ Sbjct: 176 DYKRILQLKQVLEFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRI 235 Query: 60 LLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 A ++L T+ I +IA G+ F R F++ TP Y+ R Sbjct: 236 EEACLQLAATDDSITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_A4XMI8 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMI8_CALS8 Length = 516 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 56/101 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 + I++ I +I+E+ + +N+ +VA + +Y +F+ T + DY+ + R+ A Sbjct: 407 KDEIEEAIKFINENYYKDINMAMVANHVSLNYYYFSTIFKERTGMSFLDYLNKVRIDKAK 466 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L T I++I+ +GY + + F+R+F+ TP++YR Sbjct: 467 ELLANTNLKIWEISEKVGYKNPKHFARIFKEITGLTPNEYR 507 >UniRef50_A9BU22 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9BU22_DELAS Length = 326 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + I ++ +ID H+DQPL+ +A + +S+++ R+F +TLG Y ++RRL Sbjct: 13 EYARRINRVLNYIDAHLDQPLDGAHLADIANFSRFHFHRIFAAWMGETLGSYAQRRRLEK 72 Query: 62 AAVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 AA L ++ + + A+ G+ S + F+R F+ +F TPS +R Sbjct: 73 AAFRLSCGSKETVLETALATGFQSGEAFARAFKLKFGCTPSAWR 116 >UniRef50_C7IEN8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IEN8_9CLOT Length = 279 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 59/105 (56%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + I +I+ H+ + + D +A+ + YS ++ QR F +T T+ +Y+R RRL Sbjct: 1 MDWVRSLNYAIDYIEVHLSENIVCDDIAQSAFYSSFHFQRTFSLLTGMTVSEYVRNRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 LAA EL + + D+A+ GY + ++F++ FRR PS + Sbjct: 61 LAAQELLNYDSKVIDVALKYGYDTPESFAKAFRRFHGVLPSQAKK 105 >UniRef50_C3BTE5 Transcriptional regulator, AraC n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BTE5_9BACI Length = 303 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 66/105 (62%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +I+ ++ +I ++ + L++ VVAKK+G S ++ RMF+ V +TL Y+ + +L A Sbjct: 19 NLEIVIPILVYIQANLHEDLDLKVVAKKAGLSPFHFHRMFKNVVGETLKQYVLRIKLEKA 78 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L+ + I I+ +LG+ + ++F+R F+R+F TP DYR + Sbjct: 79 AFALKYWDEKILSISNELGFKNPESFTRAFKREFQYTPKDYRQQF 123 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 52/102 (50%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 S + + I +I + +++D +AK G S+ +L R+F Q+ DY+ R+ Sbjct: 170 SSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYRVFMANVGQSPIDYLTNYRISE 229 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 A L+ + I +IA+ +G+ Q FSRVF++ PS Y Sbjct: 230 ACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPSKY 271 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 51/107 (47%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + +I H+ + + ++ +A Y + F+ T Y+ +R+ Sbjct: 169 MEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYFIKYFKRHFGITPQKYLSLKRME 228 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A + LRTT I +IA G+ S FS+ FR++ +PS+YR+ + Sbjct: 229 QAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGYSPSEYRNNI 275 >UniRef50_UPI0001C3678C two component transcriptional regulator, AraC family protein n=2 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3678C Length = 539 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 59/114 (51%), Gaps = 7/114 (6%) Query: 1 MSHQKIIQD-------LIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDY 53 M ++ +++ + ++D H + L+ D +++ + YL R+F+ ++ Y Sbjct: 417 MEYKDVVERPHTIVDTIRDYMDHHFQENLSRDDLSRLVFLNPDYLSRLFKKEMGLSISSY 476 Query: 54 IRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 + Q+R+ LA L TT P+ I+ GY + F++VF+ + +P++YR + Sbjct: 477 LIQKRIDLAKELLSTTRTPVSVISSQAGYDNFAYFTKVFKEKTGMSPNEYRKKC 530 >UniRef50_A9KQP4 Two component transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KQP4_CLOPH Length = 533 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 56/105 (53%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 ++ ++ +I ++ + L+++ V+++ S +Y ++F+ T DY+ + R+ Sbjct: 425 VTSISTVEKAKLYIRDNYQKDLSLEEVSRQVDISPYYFSKVFKEETGTNFIDYLTELRMS 484 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +A L +ER + +I + +GY FSR F++ TP++Y+ Sbjct: 485 VAKQLLLESERSMKEIGIMVGYSDPNYFSRSFKKNIGITPTEYKE 529 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Query: 7 IQDLIAWIDEHID-QPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 IQ +I+E+ + L++ VA G S YL R F++ T+ Y+ Q R+ A Sbjct: 246 IQKAKRFIEENYAMEDLSLQEVADSVGMSVTYLSRTFKSETNMNFVKYLVQVRMEKAREL 305 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L +E + A +G+ FS+ F++ TPS YR + Sbjct: 306 LAESELSAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAYRKQC 347 >UniRef50_A8FAK9 Transcriptional regulator n=3 Tax=Bacillus RepID=A8FAK9_BACP2 Length = 290 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 64/105 (60%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + IQ I +I+E++ ++I ++ KS +S ++ QR+F+ +T ++ +YIR RRL Sbjct: 1 MDYYERIQHSIEFIEENLQNNISIKEISSKSCFSAFHFQRLFQAITGFSVQEYIRNRRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 AA L+ T++ + IA+ Y SQ+ F+R F + F TP +R Sbjct: 61 EAARLLKETKQNVLHIAIAFQYGSQEAFTRAFVQFFGVTPGRFRK 105 >UniRef50_Q18D16 AraC-family transcriptional regulator n=6 Tax=Clostridium difficile RepID=Q18D16_CLOD6 Length = 303 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 64/104 (61%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + IQ + I+ ++ + ++I+ +A K+ S +Y QR+F+ + ++T+ +YI+ RRL Sbjct: 1 MHAWESIQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLA 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A+ L + I D+A++ G+ S +TF+R F++ + TP YR Sbjct: 61 RASEYLAEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEKYR 104 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 59/103 (57%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 +Q++ +I++H + L ++ AK G+SK++ R+F+ + T +Y+ ++R+ Sbjct: 185 EYQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRVKC 244 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 A L +TE I D+AM+ G+ S +F R F+ +PS++R Sbjct: 245 AEGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_C7M7E1 Transcriptional regulator, AraC family n=2 Tax=Bacteroidetes RepID=C7M7E1_CAPOD Length = 289 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 56/105 (53%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + I + +I+ H+D + I +A + S ++ R+F+ + ++ +I + R+ Sbjct: 8 DYTQRINKVAEYINGHLDTSIKIKTLANVANLSDFHFCRIFKALKGESPIAFIARLRIET 67 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA LR + + +IA ++GY + + S+ F+ Q+ TP+ YR Sbjct: 68 AAQLLRYSTLSVEEIAFNIGYETPASLSKAFKNQYGITPTQYRTN 112 >UniRef50_C1FU00 Transcriptional regulator, AraC family n=8 Tax=Firmicutes RepID=C1FU00_CLOBJ Length = 290 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 59/101 (58%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M + + + +I+++I + ++++ V+K + S ++ QRMF + L +YIR+RR+ Sbjct: 7 MEWIERLNSAVNYIEKNIRETIDLEEVSKIACCSTYHFQRMFAYIADIPLSEYIRRRRMS 66 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPS 101 LAAV+L++ + DI++ GY S F+R F+ PS Sbjct: 67 LAAVDLQSGNEKVIDISLKYGYDSPTAFNRAFKSVHGIAPS 107 >UniRef50_D0Y1I0 Transcriptional regulator, AraC family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y1I0_9CAUL Length = 301 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 49/99 (49%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + +Q ++ +I+++I+ L I+ +A + S ++ R F+ Y+ RR+ A Sbjct: 199 RRLQRVLDFIEDNIEAALGIEDLAAIACLSPFHFARAFKVAMGVPPHRYVAGRRMSRAKS 258 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDY 103 L P+ +IA G+ S +F R F+R +P+ Y Sbjct: 259 LLAGGAVPVAEIAYRCGFSSVSSFGRAFKRASGVSPAAY 297 >UniRef50_A9U7M3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7M3_PHYPA Length = 385 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 53/105 (50%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + +I+ I +I H+ +PL ++ +A S L R F+ T Q L YI R+ A Sbjct: 271 YSPVIRTAIEYIRLHLAEPLRLEAIATAVHVSPSDLSRQFKKETGQPLTSYINSLRIREA 330 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +R+ I DIA +G+ F++VF++ TPSDYR L Sbjct: 331 LQIIRSEPISITDIAQMVGFSDVNYFTKVFKQLQGVTPSDYRKTL 375 >UniRef50_UPI000178A7C6 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A7C6 Length = 586 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 53/106 (50%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + +I +H+ Q +++ +A ++ R+F+ T + DY+ + ++ Sbjct: 476 DRSAAVSRMKRFIRDHLSQDISLQAIADHMYMHPVHVSRLFKMETGFNVSDYVLRLKMEQ 535 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA L F+IA+ LGY + F RVF++ + TP +YR+ L Sbjct: 536 AAELLADHSLKNFEIALKLGYHNPNYFIRVFKKYYSVTPQEYRNSL 581 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 61/104 (58%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 Q+ L +I+ H + L++D +A ++G+SK++ R+F+ +T T +Y+ RRLL Sbjct: 178 EQQERFSMLCNYINAHCTEDLSLDELANEAGFSKYHFARLFKEITGTTCHNYLLGRRLLF 237 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L PI ++AM G+ S TF+R+F+ Q TPS++R Sbjct: 238 AKTLLADFSLPITEVAMRSGFNSLATFNRIFKFQIGCTPSEFRK 281 >UniRef50_B7GJK9 DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJK9_ANOFW Length = 428 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 51/100 (51%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I+ + ++ E+ + ++ VAK + +Y ++F+ T QT DY+ R+ A Sbjct: 323 VIEQVEMFLQENYCYDVTLEEVAKYVHLTPYYFSKLFKKETGQTFIDYVTHLRIEKAKQL 382 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +R + + +GY FSRVF++ + TP++YR Sbjct: 383 MRDEGLTVKEACYRVGYKDPNYFSRVFKKVTNMTPTEYRQ 422 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 135 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 53/100 (53%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 ++ +I ++E + + ++ +A+ S+++ RMF+ T + Y R+ A Sbjct: 277 KLRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIGLRMARARQL 336 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T R I DI +++GY S FS+VFRR+ TPS YR Sbjct: 337 LLETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPSIYRQ 376 >UniRef50_C5EQJ6 AraC-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ6_9FIRM Length = 289 Score = 135 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 42/105 (40%), Positives = 73/105 (69%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++ +IIQ+++ +ID H++ L+ + +++++GYS+++L RMF ++T +L YI++RRL Sbjct: 3 TNIQIIQEVVDYIDSHLEDRLDAESISRQAGYSRYHLSRMFTSITGLSLHTYIQRRRLTE 62 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 AA +L T+RP+ DIA+ GY SQQ F+ FR F TP +R + Sbjct: 63 AARQLVFTDRPVMDIALSAGYGSQQAFTVGFRALFRTTPRAFRKK 107 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 135 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 57/103 (55%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 ++ +++++++I + + L I+ ++ +S+ + F+ T +YI R+ AA Sbjct: 162 EEKLKEVLSYIQSNYRETLTIEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAA 221 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106 +L TER + DIAM+ G+ + F++VF+ +F TP YR Sbjct: 222 ADLVETERQVMDIAMENGFRNISYFNKVFKERFGVTPGSYRKN 264 >UniRef50_A5Z5R3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5R3_9FIRM Length = 509 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 51/105 (48%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + I++ + +I EH++ L+++ +A+ ++ Y R F+ ++ YI R+ A Sbjct: 402 YSSFIEESLNYIKEHLEDDLSLEQIAQHIHINESYFSRTFKKECGNSVISYINNLRINKA 461 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L T+ F+I+ +G FS +F++ +P YR + Sbjct: 462 KELLATSNLKTFEISEAVGIHDPAYFSVLFKKNTGMSPKAYRDQF 506 >UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35507 Length = 307 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 2 SHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 + + L+++I++H +PL ++ +A +G+SK++ R+F+ T+ T DY+ ++R+ Sbjct: 192 DYYQKFNSLLSYINDHFAEPLTLEKMADYTGFSKYHFTRLFKQHTNSTFYDYLSRKRI-Q 250 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 AA L TT+ I IA G+ + +F+R F++ + +PS+YR + Sbjct: 251 AAQTLLTTDASITSIAFQTGFNNSTSFTRCFKKYTNYSPSEYRTKF 296 >UniRef50_A9KM10 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM10_CLOPH Length = 136 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 60/98 (61%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I + +I+E+ + +D +AK GYSK++L RMF T T+ YI +RRL AA L Sbjct: 5 ISKVKKYIEENFKDDITLDDIAKNVGYSKYHLNRMFLENTGLTIHKYICERRLTEAADLL 64 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 T++ I DIA+ +GY SQQ F+ F++ FD TP YR Sbjct: 65 LYTDQSIVDIALSIGYTSQQAFTLAFKQMFDCTPYKYR 102 >UniRef50_Q2NSQ1 Putative right origin-binding protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NSQ1_SODGM Length = 201 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 54/105 (51%), Positives = 75/105 (71%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M IIQDL++W++ H+D PL ++ VA++SGYSKW+LQR F+ T Q +G YIR RRL Sbjct: 1 MDQAGIIQDLLSWLEGHLDTPLTLNRVAERSGYSKWHLQRKFKLATGQAIGAYIRARRLS 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A + LR T R + DIA+ G+ SQQTF+R F++QF +TP+ YR Sbjct: 61 RAVLALRLTSRSVADIALQYGFDSQQTFTRPFKKQFIQTPALYRR 105 >UniRef50_B8I425 Two component transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I425_CLOCE Length = 538 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 53/99 (53%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 I++ I +I EH ++ + ++ VA+ S +Y+ RMF+ ++ DY+ R+ A Sbjct: 436 ILRKAIDYIQEHYNEQVTLNEVAENIYVSTFYISRMFKKELGKSFVDYLNDVRIDKAKEL 495 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYR 104 L+ +++A +G FS++F++ TPS+YR Sbjct: 496 LKDVRYKTYEVAEKVGISDPHYFSKLFKKYSGMTPSEYR 534 >UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HPW1_9RHOB Length = 273 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 53/101 (52%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 I +I +I L++D +A + S+++ R+F + + IR R+ A + Sbjct: 2 DRILRVIDYIHTQAADDLSLDQLADVAAMSRFHWHRVFTAIMGASPAQIIRSVRMHKATM 61 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T+ PI IA +GY + ++FSR F+ + +TP+ +R+ Sbjct: 62 LLLRTDLPIAQIAAHVGYSNDRSFSRTFKDIYGQTPTAFRN 102 >UniRef50_Q5QL43 Two-component response regulator n=2 Tax=Geobacillus RepID=Q5QL43_GEOKA Length = 258 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 53/103 (51%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 I+ + +I ++ PL ++ VA S+ + R+F++ T T +Y+ Q R+ + Sbjct: 146 NPIESALRYIQDNYHLPLTLNEVASMVYLSQSHFSRLFKSATGMTFVEYLTQVRIQKSKY 205 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ + PI IA G+ + F+ F+R +TP++YR L Sbjct: 206 LLKMSSLPIDVIAHKTGFSNASYFATTFKRLEGKTPTEYRELL 248 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 63/105 (60%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + ++ +I E+ Q L+ID+++ K S YL R F+ T+ +YI RL + Sbjct: 180 YLDRLTEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKS 239 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 +L T++ I +IA++ G+ ++++F++VF+ ++ TP+ YR ++ Sbjct: 240 YRDLMNTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKI 284 >UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5Z2_9FIRM Length = 533 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 59/101 (58%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 + ++ I +I E+ D+ + + +A+ S Y +F+ T + + DYI + R+ +A Sbjct: 431 RPLRKAIKYIKENYDKQITAETLAEVVNLSPVYFSHLFKKQTGKNMTDYITEYRMEIAKK 490 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L T++ IF+IA+ +G+ Q+ FS+ F++ +TPS+YR Sbjct: 491 MLFDTDKTIFEIAVAVGFQDQRYFSKRFKQIVGKTPSEYRK 531 >UniRef50_Q31GA4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=Q31GA4_THICR Length = 288 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Query: 3 HQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 + + + +I H++ L+++ +++ + +SK++ R F T T T+G ++ +RL A Sbjct: 9 YINRMNRVCDYILAHLNDDLSVEKLSEVACFSKFHFHRQFSTYTGMTVGKFVLMQRLKQA 68 Query: 63 AVELR-TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 + +L + DIA++ + S + FSR F+ F +TPS +R Sbjct: 69 SKQLAFNQPMRVIDIALEAHFESPEAFSRAFKNTFGQTPSQFRQ 112 >UniRef50_B3EYL7 Two-component response regulator n=5 Tax=Firmicutes RepID=B3EYL7_BACST Length = 404 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 4 QKIIQDLIAWIDEHIDQ-PLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLA 62 I++ +I +H Q L ++ VA+ S YL RM + + + + R+ A Sbjct: 293 SPIVRRARQYIQKHFSQSDLTLESVAEFLNVSPVYLSRMIKQELGISFIHLLTKIRMEKA 352 Query: 63 AVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 A L +TE PI +IA +GY +Q FS F++ +P+ YR Sbjct: 353 AELLLSTELPIHEIAERVGYDTQHYFSTAFKKAMGVSPNQYRR 395 >UniRef50_UPI0001C362BB response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C362BB Length = 482 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 56/102 (54%) Query: 4 QKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAA 63 +I+ ++I +I H + +N++V+A + S YL R F T ++ Y+ R+ +A Sbjct: 376 SEIVDNVIRYIKNHYKEDINLNVLANEFFLSPAYLSRKFSQTTGVSIMSYLEDYRINVAT 435 Query: 64 VELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 L+ +ER I +IA +GY F+++F++ TP ++R Sbjct: 436 DLLKGSERSISEIADQVGYYDANYFTKIFKKVKGITPKEFRK 477 >UniRef50_C6D789 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D789_PAESJ Length = 547 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 58/102 (56%) Query: 6 IIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVE 65 +I + +I+EH+++ L++ +A+ + ++ YL R F+ L +YI R+ A Sbjct: 443 VIDKICHYINEHLNEDLSLVRLAEINYFNPSYLSRFFKLECGVNLSEYIDNCRVRRAKEL 502 Query: 66 LRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 L+ E + ++A+++GY + +F+R F++ TP +YR L Sbjct: 503 LKEDELKVREVAVEVGYEAAHSFTRFFKKATGMTPQEYRDAL 544 >UniRef50_B0K339 Response regulator receiver protein n=9 Tax=Thermoanaerobacterales RepID=B0K339_THEPX Length = 365 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 1/106 (0%) Query: 3 HQKIIQDLIAWIDEHIDQ-PLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLL 61 ++K+I + I I E+ ++++ +A+K + YL +F++ T DY+ R+ Sbjct: 259 NRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEK 318 Query: 62 AAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 A L+ + I+++A +GY Q FS+VF+ TP +YR ++ Sbjct: 319 AKELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREKI 364 >UniRef50_A8GD44 Transcriptional regulator, AraC family n=9 Tax=Enterobacteriaceae RepID=A8GD44_SERP5 Length = 118 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 73/105 (69%) Query: 1 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL 60 M+ I DLI WID ++++ L+I+ VA ++GYSKW+LQRMF+ T LG+YIR ++L Sbjct: 1 MNSTGFITDLIEWIDNNLEEKLDINTVAGRAGYSKWHLQRMFKRQTGYALGEYIRMQKLR 60 Query: 61 LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 ++A L + PI +A+ LG+ SQQ+F+R F+R + +TP D+R Sbjct: 61 VSAERLANSGEPIVSVAISLGFDSQQSFNRSFKRHYGQTPGDWRR 105 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 54/101 (53%) Query: 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66 I+ ++ +I+ + QPL + S YS++Y ++F+ T +TL YI R+ A L Sbjct: 182 IKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPML 241 Query: 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL 107 ++ + +IA+++G+ + F + F++ +P +R L Sbjct: 242 LHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNL 282 >UniRef50_Q48413 Transcriptional activator ramA n=51 Tax=Bacteria RepID=RAMA_KLEPN Length = 113 Score = 134 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 49/101 (48%), Positives = 75/101 (74%) Query: 5 KIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAV 64 ++I ++ WID+++ QPL ID +A+ +GYSKW+LQR+F ++LG YIR+R+LLLAA Sbjct: 6 QVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKLLLAAR 65 Query: 65 ELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 +LR T++ ++DI + G+ SQQTF+RVF R F++ P YR Sbjct: 66 DLRDTDQRVYDICLKYGFDSQQTFTRVFTRTFNQPPGAYRK 106 >UniRef50_A5W8X4 Transcriptional regulator, AraC family n=13 Tax=Pseudomonas RepID=A5W8X4_PSEP1 Length = 291 Score = 134 bits (340), Expect = 7e-31, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 52/98 (53%) Query: 8 QDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELR 67 + L+ +++ H+DQP+ ++ +A + S+++ RMFR Y+ RRL A LR Sbjct: 190 RQLVDYLEAHLDQPITLEELALRCNLSEYHFARMFRASFGLPPHQYLLARRLHRACQLLR 249 Query: 68 TTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRH 105 P+ +IA+ G+ S FS FR+ TP +YR Sbjct: 250 LGVLPLGEIALLCGFASASHFSNRFRQALGATPGEYRK 287 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.317 0.215 0.788 Lambda K H 0.267 0.0653 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,228,976,432 Number of Sequences: 3077464 Number of extensions: 84795007 Number of successful extensions: 305441 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 19888 Number of HSP's successfully gapped in prelim test: 1640 Number of HSP's that attempted gapping in prelim test: 253588 Number of HSP's gapped (non-prelim): 28132 length of query: 107 length of database: 1,040,396,356 effective HSP length: 75 effective length of query: 32 effective length of database: 809,586,556 effective search space: 25906769792 effective search space used: 25906769792 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.5 bits) S2: 89 (38.2 bits)